BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7592
(246 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 279 bits (713), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 132/233 (56%), Positives = 176/233 (75%), Gaps = 8/233 (3%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KVCIVQK DTK+MYAMKYM+K +C+ER+ ++NV +E++I+ LEHPFLVNLW+ FQDEE
Sbjct: 29 GKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE 88
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
D+FMV DLLLGGDLRYH+ Q++ F + +T+ L+ EL +ALDYL+ + IIHRD+KP
Sbjct: 89 DMFMVVDLLLGGDLRYHLQQNVHF-----KEETVKLFICELVMALDYLQNQRIIHRDMKP 143
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
DNILLDE GH HITDFNIA +L T+M+GTKPY+APE+F ++ + GYS++VDWW
Sbjct: 144 DNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMF--SSRKGAGYSFAVDWW 201
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKD-VKAIIYSPVHYPTAWSESTKHLLSQV 243
SLGVT +E+L RP+ I S+TS K+ V + V YP+AWS+ LL ++
Sbjct: 202 SLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKL 254
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 144 bits (363), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 139/240 (57%), Gaps = 17/240 (7%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G+ F +V +++ + + YAMK + K + +++ E +L+ + HPF++ +
Sbjct: 15 GTGSF---GRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
W FQD + +FM+ D + GG+L + + +F N YA E+ LAL+YL +K
Sbjct: 72 WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRF-----PNPVAKFYAAEVCLALEYLHSKD 126
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
II+RD+KP+NILLD+ GH ITDF A + + + + GT YIAPE+ V+T
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYVPD--VTYXLCGTPDYIAPEV--VSTKP--- 179
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
Y+ S+DWWS G+ ++E+LA PF + + ++K + I+ + + +P ++E K LLS++
Sbjct: 180 YNKSIDWWSFGILIYEMLAGYTPF--YDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRL 237
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 131/244 (53%), Gaps = 14/244 (5%)
Query: 3 CGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
G F V + D +Q+YAMK + K+ RD ++ + E +IL + HPF+V
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVEVNHPFIVK 91
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L + FQ E L+++ D L GGDL +++++ F T D + Y EL LALD+L +
Sbjct: 92 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF----TEED-VKFYLAELALALDHLHSL 146
Query: 123 HIIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTKPYIAPEIFLVATDEV 181
II+RD+KP+NILLDEEGH +TDF ++ ++ + A S GT Y+APE+
Sbjct: 147 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-----NR 201
Query: 182 LGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
G++ S DWWS GV +FE+L PF + + I+ + + P S + LL
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTMILKAKLGMPQFLSPEAQSLLR 259
Query: 242 QVHR 245
+ +
Sbjct: 260 MLFK 263
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 131/244 (53%), Gaps = 14/244 (5%)
Query: 3 CGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
G F V + D +Q+YAMK + K+ RD ++ + E +IL + HPF+V
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVEVNHPFIVK 90
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L + FQ E L+++ D L GGDL +++++ F T D + Y EL LALD+L +
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF----TEED-VKFYLAELALALDHLHSL 145
Query: 123 HIIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTKPYIAPEIFLVATDEV 181
II+RD+KP+NILLDEEGH +TDF ++ ++ + A S GT Y+APE+
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-----NR 200
Query: 182 LGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
G++ S DWWS GV +FE+L PF + + I+ + + P S + LL
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTMILKAKLGMPQFLSPEAQSLLR 258
Query: 242 QVHR 245
+ +
Sbjct: 259 MLFK 262
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 131/244 (53%), Gaps = 14/244 (5%)
Query: 3 CGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
G F V + D +Q+YAMK + K+ RD ++ + E +IL + HPF+V
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVEVNHPFIVK 90
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L + FQ E L+++ D L GGDL +++++ F T D + Y EL LALD+L +
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF----TEED-VKFYLAELALALDHLHSL 145
Query: 123 HIIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTKPYIAPEIFLVATDEV 181
II+RD+KP+NILLDEEGH +TDF ++ ++ + A S GT Y+APE+
Sbjct: 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV-----NR 200
Query: 182 LGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
G++ S DWWS GV +FE+L PF + + I+ + + P S + LL
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTMILKAKLGMPQFLSPEAQSLLR 258
Query: 242 QVHR 245
+ +
Sbjct: 259 MLFK 262
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 118/206 (57%), Gaps = 12/206 (5%)
Query: 3 CGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
G F V V + D+ +YAMK + K+ RD ++ + E +IL + HPF+V
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM-ERDILADVNHPFVVK 94
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L + FQ E L+++ D L GGDL +++++ F T D + Y EL L LD+L +
Sbjct: 95 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF----TEED-VKFYLAELALGLDHLHSL 149
Query: 123 HIIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTKPYIAPEIFLVATDEV 181
II+RD+KP+NILLDEEGH +TDF ++ ++ + A S GT Y+APE+
Sbjct: 150 GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV-----NR 204
Query: 182 LGYSYSVDWWSLGVTLFEILARGRPF 207
G+S+S DWWS GV +FE+L PF
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K+T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 48 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 107
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 108 NLYMVMEYVPGGEMFSHLRRIGRFXEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 162
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 163 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 215
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 216 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 265
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 42 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 101
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 102 NLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 156
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+DE+G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 157 ENLLIDEQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 209
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 210 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 259
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 137 bits (344), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K+T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 76 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 135
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 136 NLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 190
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 191 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 243
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 244 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 293
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 137 bits (344), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 132/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ ++GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLAGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 137 bits (344), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K+T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 223
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 224 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 273
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 137 bits (344), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K+T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 223
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 224 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 273
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 137 bits (344), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K+T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 223
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 224 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 273
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 137 bits (344), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K+T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 48 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 107
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 108 NLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 162
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 163 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 215
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 216 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 265
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 136 bits (343), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 132/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 76 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 135
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 136 NLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 190
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ ++ GT Y+APEI L GY+ +VDWW
Sbjct: 191 ENLLIDQQGYIQVTDFGFAKRVK--GATWTLCGTPEYLAPEIILSK-----GYNKAVDWW 243
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 244 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 293
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 50 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 109
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 110 NLYMVMEYVAGGEMFSHLRRIGRFXEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 164
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 165 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 217
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 218 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 267
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 76 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 135
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 136 NLYMVMEYVAGGEMFSHLRRIGRFXEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 190
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 191 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 243
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 244 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 293
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 136 bits (343), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFXEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFXEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLXGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFXEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFAEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 56 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 116 NLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 223
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 224 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 273
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADEPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 116/208 (55%), Gaps = 12/208 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDE 70
+KV +V+ K T ++YAM+ + K + + + V E + HPFLV L CFQ E
Sbjct: 66 AKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE 125
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIK 130
LF V + + GGDL +H+ + K R Y+ E+ LAL+YL + II+RD+K
Sbjct: 126 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR-----FYSAEISLALNYLHERGIIYRDLK 180
Query: 131 PDNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
DN+LLD EGH +TD+ + L ++ GT YIAPEI L D Y +SVD
Sbjct: 181 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEI-LRGED----YGFSVD 235
Query: 190 WWSLGVTLFEILARGRPFDIHSNTSVKD 217
WW+LGV +FE++A PFDI ++ D
Sbjct: 236 WWALGVLMFEMMAGRSPFDIVGSSDNPD 263
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 115/208 (55%), Gaps = 12/208 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDE 70
+KV +V+ K T ++YAMK + K + + + V E + HPFLV L CFQ E
Sbjct: 34 AKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE 93
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIK 130
LF V + + GGDL +H+ + K R Y+ E+ LAL+YL + II+RD+K
Sbjct: 94 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR-----FYSAEISLALNYLHERGIIYRDLK 148
Query: 131 PDNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
DN+LLD EGH +TD+ + L + GT YIAPEI L D Y +SVD
Sbjct: 149 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI-LRGED----YGFSVD 203
Query: 190 WWSLGVTLFEILARGRPFDIHSNTSVKD 217
WW+LGV +FE++A PFDI ++ D
Sbjct: 204 WWALGVLMFEMMAGRSPFDIVGSSDNPD 231
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 56 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ ++ GT Y+APEI L GY+ +VDWW
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGR--TWTLCGTPEYLAPEIILSK-----GYNKAVDWW 223
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 224 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 273
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 115/208 (55%), Gaps = 12/208 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDE 70
+KV +V+ K T ++YAMK + K + + + V E + HPFLV L CFQ E
Sbjct: 19 AKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE 78
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIK 130
LF V + + GGDL +H+ + K R Y+ E+ LAL+YL + II+RD+K
Sbjct: 79 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR-----FYSAEISLALNYLHERGIIYRDLK 133
Query: 131 PDNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
DN+LLD EGH +TD+ + L + GT YIAPEI L D Y +SVD
Sbjct: 134 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI-LRGED----YGFSVD 188
Query: 190 WWSLGVTLFEILARGRPFDIHSNTSVKD 217
WW+LGV +FE++A PFDI ++ D
Sbjct: 189 WWALGVLMFEMMAGRSPFDIVGSSDNPD 216
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 135 bits (339), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 41 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 100
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 101 NLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 155
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ ++ GT Y+APEI L GY+ +VDWW
Sbjct: 156 ENLLIDQQGYIQVTDFGFAKRVKGR--TWTLCGTPEYLAPEIILSK-----GYNKAVDWW 208
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 209 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 258
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 115/208 (55%), Gaps = 12/208 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDE 70
+KV +V+ K T ++YAMK + K + + + V E + HPFLV L CFQ E
Sbjct: 23 AKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE 82
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIK 130
LF V + + GGDL +H+ + K R Y+ E+ LAL+YL + II+RD+K
Sbjct: 83 SRLFFVIEYVNGGDLMFHMQRQRKLPEEHAR-----FYSAEISLALNYLHERGIIYRDLK 137
Query: 131 PDNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
DN+LLD EGH +TD+ + L + GT YIAPEI L D Y +SVD
Sbjct: 138 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEI-LRGED----YGFSVD 192
Query: 190 WWSLGVTLFEILARGRPFDIHSNTSVKD 217
WW+LGV +FE++A PFDI ++ D
Sbjct: 193 WWALGVLMFEMMAGRSPFDIVGSSDNPD 220
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K+T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+++D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 223
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 224 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 273
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++++ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYQMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFXEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFXEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 134 bits (338), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 56 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFXEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 223
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 224 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 273
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 134 bits (337), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 56 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 115
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 116 NLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 171 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 223
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 224 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 273
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 134 bits (337), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 129/232 (55%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GGD+ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYMPGGDMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ + DF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+++D++G+ +TDF A ++ + GT Y+APEI + GY+ +VDWW
Sbjct: 170 ENLIIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIIISK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 129/232 (55%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GGD+ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYMPGGDMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ + DF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 134 bits (336), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K+T +AMK + K + ++ +++ L E IL + PFLV L + F+D
Sbjct: 55 GRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 134 bits (336), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 125/232 (53%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILT-TLEHPFLVNLWFCFQDE 70
KV + + K+T +YA+K + K ++ D ++ + E IL+ HPFL L+ CFQ
Sbjct: 37 GKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP 96
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIK 130
+ LF V + + GGDL +HI + +F R YA E+ AL +L K II+RD+K
Sbjct: 97 DRLFFVMEFVNGGDLMFHIQKSRRFDEARAR-----FYAAEIISALMFLHDKGIIYRDLK 151
Query: 131 PDNILLDEEGHAHITDFNIATVLEENQLATS-MSGTKPYIAPEIFLVATDEVLGYSYSVD 189
DN+LLD EGH + DF + N + T+ GT YIAPEI E+L Y +VD
Sbjct: 152 LDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEIL----QEML-YGPAVD 206
Query: 190 WWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
WW++GV L+E+L PF+ + + +AI+ V YPT E +L
Sbjct: 207 WWAMGVLLYEMLCGHAPFEAENEDDL--FEAILNDEVVYPTWLHEDATGILK 256
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 134 bits (336), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K+T +AMK + K + ++ +++ L E IL + PFLV L + F+D
Sbjct: 55 GRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 134 bits (336), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 131/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K+T +AMK + K + ++ +++ L E IL + PFLV L + F+D
Sbjct: 55 GRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT Y+AP I L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPAIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 133 bits (335), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+++D++G+ +TDF +A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLMIDQQGYIQVTDFGLAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 124/231 (53%), Gaps = 14/231 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEIL-TTLEHPFLVNLWFCFQDE 70
KV + + K + YA+K + K +++ K+++ E +L ++HPFLV L F FQ
Sbjct: 52 GKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA 111
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIK 130
+ L+ V D + GG+L YH+ ++ F R YA E+ AL YL + +I++RD+K
Sbjct: 112 DKLYFVLDYINGGELFYHLQRERCFLEPRAR-----FYAAEIASALGYLHSLNIVYRDLK 166
Query: 131 PDNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
P+NILLD +GH +TDF + +E N ++ GT Y+APE+ Y +VD
Sbjct: 167 PENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP-----YDRTVD 221
Query: 190 WWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLL 240
WW LG L+E+L PF +S + + I+ P+ + S +HLL
Sbjct: 222 WWCLGAVLYEMLYGLPPF--YSRNTAEMYDNILNKPLQLKPNITNSARHLL 270
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+++D++G+ +TDF +A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLMIDQQGYIKVTDFGLAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K++ YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ +TDF A ++ + GT +APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEALAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 129/232 (55%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+++D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLMIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 129/232 (55%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFXEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+++D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 129/232 (55%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYAPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+++D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 129/232 (55%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFLV L F F+D
Sbjct: 55 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS 114
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 115 NLYMVMEYVPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 169
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ + DF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 222
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 223 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 272
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 128/232 (55%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K+T YAMK + K + ++ +++ L E I + PFLV L F F+D
Sbjct: 56 GRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNS 115
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 116 NLYMVLEYAPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+L+D++G+ + DF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 171 ENLLIDQQGYIKVADFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 223
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 224 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 273
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 127/238 (53%), Gaps = 22/238 (9%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILT-TLEHPFLVNLWFCFQDE 70
KV + + K T Q +A+K + K + D ++ + E +L+ EHPFL +++ FQ +
Sbjct: 31 GKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK 90
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKF-YSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
E+LF V + L GGDL YHI KF S T YA E+ L L +L +K I++RD+
Sbjct: 91 ENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT------FYAAEIILGLQFLHSKGIVYRDL 144
Query: 130 KPDNILLDEEGHAHITDFNIATVLEENQLATSMS----GTKPYIAPEIFLVATDEVLGYS 185
K DNILLD++GH I DF + +EN L + + GT YIAPEI L Y+
Sbjct: 145 KLDNILLDKDGHIKIADFGMC---KENMLGDAKTNXFCGTPDYIAPEILLGQK-----YN 196
Query: 186 YSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+SVDWWS GV L+E+L PF H + +I YP + K LL ++
Sbjct: 197 HSVDWWSFGVLLYEMLIGQSPF--HGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKL 252
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 128/232 (55%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFL L F F+D
Sbjct: 56 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNS 115
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFXEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+++D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 223
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 224 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 273
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 127/238 (53%), Gaps = 22/238 (9%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILT-TLEHPFLVNLWFCFQDE 70
KV + + K T Q +A+K + K + D ++ + E +L+ EHPFL +++ FQ +
Sbjct: 32 GKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK 91
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKF-YSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
E+LF V + L GGDL YHI KF S T YA E+ L L +L +K I++RD+
Sbjct: 92 ENLFFVMEYLNGGDLMYHIQSCHKFDLSRAT------FYAAEIILGLQFLHSKGIVYRDL 145
Query: 130 KPDNILLDEEGHAHITDFNIATVLEENQLATSMS----GTKPYIAPEIFLVATDEVLGYS 185
K DNILLD++GH I DF + +EN L + + GT YIAPEI L Y+
Sbjct: 146 KLDNILLDKDGHIKIADFGMC---KENMLGDAKTNEFCGTPDYIAPEILLGQK-----YN 197
Query: 186 YSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+SVDWWS GV L+E+L PF H + +I YP + K LL ++
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSPF--HGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKL 253
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 122/238 (51%), Gaps = 17/238 (7%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHP-F 59
M G F KV + +K T+++YA+K + K I+ D ++ + E +L L+ P F
Sbjct: 25 MVLGKGSF---GKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPF 81
Query: 60 LVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYL 119
L L CFQ + L+ V + + GGDL YHI Q KF + YA E+ + L +L
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKF-----KEPQAVFYAAEISIGLFFL 136
Query: 120 KTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT-SMSGTKPYIAPEIFLVAT 178
+ II+RD+K DN++LD EGH I DF + + + T GT YIAPEI
Sbjct: 137 HKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQP 196
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSEST 236
Y SVDWW+ GV L+E+LA PFD + ++I+ V YP + S+
Sbjct: 197 -----YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL--FQSIMEHNVSYPKSLSKEA 247
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 128/232 (55%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFL L F F+D
Sbjct: 56 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNS 115
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+++D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 223
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 224 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 273
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 130 bits (327), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 128/232 (55%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ +T YAMK + K + ++ +++ L E IL + PFL L F F+D
Sbjct: 56 GRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNS 115
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+MV + GG++ H+ + +F R YA ++ L +YL + +I+RD+KP
Sbjct: 116 NLYMVMEYAPGGEMFSHLRRIGRFSEPHAR-----FYAAQIVLTFEYLHSLDLIYRDLKP 170
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+++D++G+ +TDF A ++ + GT Y+APEI L GY+ +VDWW
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEIILSK-----GYNKAVDWW 223
Query: 192 SLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+LGV ++E+ A PF ++ ++ + I+ V +P+ +S K LL +
Sbjct: 224 ALGVLIYEMAAGYPPF--FADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL 273
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 122/231 (52%), Gaps = 13/231 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV +V++K T + YAMK + K I +D + + + E +L HPFL L + FQ +
Sbjct: 19 GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD 78
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L V + GG+L +H++++ F R Y E+ AL+YL ++ +++RDIK
Sbjct: 79 RLCFVMEYANGGELFFHLSRERVFTEERAR-----FYGAEIVSALEYLHSRDVVYRDIKL 133
Query: 132 DNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
+N++LD++GH ITDF + + + + GT Y+APE+ E Y +VDW
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL-----EDNDYGRAVDW 188
Query: 191 WSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
W LGV ++E++ PF ++ + + I+ + +P S K LL+
Sbjct: 189 WGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSLLA 237
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 123/238 (51%), Gaps = 17/238 (7%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILT-TLEHPF 59
M G F KV + ++K T ++YA+K + K I+ D ++ + E +L + PF
Sbjct: 26 MVLGKGSF---GKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF 82
Query: 60 LVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYL 119
L L CFQ + L+ V + + GGDL YHI Q +F + YA E+ + L +L
Sbjct: 83 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRF-----KEPHAVFYAAEIAIGLFFL 137
Query: 120 KTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS-MSGTKPYIAPEIFLVAT 178
++K II+RD+K DN++LD EGH I DF + + + T GT YIAPEI
Sbjct: 138 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 197
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSEST 236
Y SVDWW+ GV L+E+LA PF+ + ++I+ V YP + S+
Sbjct: 198 -----YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL--FQSIMEHNVAYPKSMSKEA 248
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 133/249 (53%), Gaps = 20/249 (8%)
Query: 7 KFCGTS---KVCIVQK---KDTKQMYAMKYMHKSQCIERDALKNVLR-EMEILTTL-EHP 58
K GT KV +V+K DT ++YAMK + K+ +++ R E ++L + + P
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 59 FLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDY 118
FLV L + FQ E L ++ D + GG+L H++Q +F + +Y E+ LAL++
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE-----HEVQIYVGEIVLALEH 174
Query: 119 LKTKHIIHRDIKPDNILLDEEGHAHITDFNIAT--VLEENQLATSMSGTKPYIAPEIFLV 176
L II+RDIK +NILLD GH +TDF ++ V +E + A GT Y+AP+I
Sbjct: 175 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 234
Query: 177 ATDEVLGYSYSVDWWSLGVTLFEILARGRPF--DIHSNTSVKDVKAIIYSPVHYPTAWSE 234
G+ +VDWWSLGV ++E+L PF D N+ + + I+ S YP S
Sbjct: 235 GDS---GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSA 291
Query: 235 STKHLLSQV 243
K L+ ++
Sbjct: 292 LAKDLIQRL 300
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 126 bits (317), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 122/231 (52%), Gaps = 13/231 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV +V++K T + YAMK + K I +D + + + E +L HPFL L + FQ +
Sbjct: 19 GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD 78
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L V + GG+L +H++++ F R Y E+ AL+YL ++ +++RDIK
Sbjct: 79 RLCFVMEYANGGELFFHLSRERVFTEERAR-----FYGAEIVSALEYLHSRDVVYRDIKL 133
Query: 132 DNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
+N++LD++GH ITDF + + + + GT Y+APE+ E Y +VDW
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL-----EDNDYGRAVDW 188
Query: 191 WSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
W LGV ++E++ PF ++ + + I+ + +P S K LL+
Sbjct: 189 WGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSLLA 237
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 126 bits (317), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 122/231 (52%), Gaps = 13/231 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV +V++K T + YAMK + K I +D + + + E +L HPFL L + FQ +
Sbjct: 22 GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD 81
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L V + GG+L +H++++ F R Y E+ AL+YL ++ +++RDIK
Sbjct: 82 RLCFVMEYANGGELFFHLSRERVFTEERAR-----FYGAEIVSALEYLHSRDVVYRDIKL 136
Query: 132 DNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
+N++LD++GH ITDF + + + + GT Y+APE+ E Y +VDW
Sbjct: 137 ENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL-----EDNDYGRAVDW 191
Query: 191 WSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
W LGV ++E++ PF ++ + + I+ + +P S K LL+
Sbjct: 192 WGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSLLA 240
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 123/238 (51%), Gaps = 17/238 (7%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILT-TLEHPF 59
M G F KV + ++K T ++YA+K + K I+ D ++ + E +L + PF
Sbjct: 347 MVLGKGSF---GKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF 403
Query: 60 LVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYL 119
L L CFQ + L+ V + + GGDL YHI Q +F + YA E+ + L +L
Sbjct: 404 LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRF-----KEPHAVFYAAEIAIGLFFL 458
Query: 120 KTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS-MSGTKPYIAPEIFLVAT 178
++K II+RD+K DN++LD EGH I DF + + + T GT YIAPEI
Sbjct: 459 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 518
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSEST 236
Y SVDWW+ GV L+E+LA PF+ + ++I+ V YP + S+
Sbjct: 519 -----YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL--FQSIMEHNVAYPKSMSKEA 569
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 13/231 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV +V++K T + YAMK + K I +D + + + E +L HPFL L + FQ +
Sbjct: 19 GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD 78
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L V + GG+L +H++++ F R Y E+ AL+YL ++ +++RDIK
Sbjct: 79 RLCFVMEYANGGELFFHLSRERVFTEERAR-----FYGAEIVSALEYLHSRDVVYRDIKL 133
Query: 132 DNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
+N++LD++GH ITDF + + + GT Y+APE+ E Y +VDW
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL-----EDNDYGRAVDW 188
Query: 191 WSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
W LGV ++E++ PF ++ + + I+ + +P S K LL+
Sbjct: 189 WGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSLLA 237
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 13/231 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV +V++K T + YAMK + K I +D + + + E +L HPFL L + FQ +
Sbjct: 19 GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD 78
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L V + GG+L +H++++ F R Y E+ AL+YL ++ +++RDIK
Sbjct: 79 RLCFVMEYANGGELFFHLSRERVFTEERAR-----FYGAEIVSALEYLHSRDVVYRDIKL 133
Query: 132 DNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
+N++LD++GH ITDF + + + GT Y+APE+ E Y +VDW
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL-----EDNDYGRAVDW 188
Query: 191 WSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
W LGV ++E++ PF ++ + + I+ + +P S K LL+
Sbjct: 189 WGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSLLA 237
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 123/232 (53%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV +V++K T + YAMK + K + +D + + L E +L HPFL L + FQ +
Sbjct: 162 GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD 221
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT-KHIIHRDIK 130
L V + GG+L +H++++ F D Y E+ ALDYL + K++++RD+K
Sbjct: 222 RLCFVMEYANGGELFFHLSRERVF-----SEDRARFYGAEIVSALDYLHSEKNVVYRDLK 276
Query: 131 PDNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
+N++LD++GH ITDF + +++ + GT Y+APE+ E Y +VD
Sbjct: 277 LENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL-----EDNDYGRAVD 331
Query: 190 WWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
WW LGV ++E++ PF ++ K + I+ + +P K LLS
Sbjct: 332 WWGLGVVMYEMMCGRLPF--YNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 381
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 13/231 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV +V++K T + YAMK + K I +D + + + E +L HPFL L + FQ +
Sbjct: 19 GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD 78
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L V + GG+L +H++++ F R Y E+ AL+YL ++ +++RDIK
Sbjct: 79 RLCFVMEYANGGELFFHLSRERVFTEERAR-----FYGAEIVSALEYLHSRDVVYRDIKL 133
Query: 132 DNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
+N++LD++GH ITDF + + + GT Y+APE+ E Y +VDW
Sbjct: 134 ENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL-----EDNDYGRAVDW 188
Query: 191 WSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
W LGV ++E++ PF ++ + + I+ + +P S K LL+
Sbjct: 189 WGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSLLA 237
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 122/232 (52%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV +V++K T + YAMK + K + +D + + L E +L HPFL L + FQ +
Sbjct: 22 GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD 81
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT-KHIIHRDIK 130
L V + GG+L +H++++ F D Y E+ ALDYL + K++++RD+K
Sbjct: 82 RLCFVMEYANGGELFFHLSRERVF-----SEDRARFYGAEIVSALDYLHSEKNVVYRDLK 136
Query: 131 PDNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
+N++LD++GH ITDF + +++ GT Y+APE+ E Y +VD
Sbjct: 137 LENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL-----EDNDYGRAVD 191
Query: 190 WWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
WW LGV ++E++ PF ++ K + I+ + +P K LLS
Sbjct: 192 WWGLGVVMYEMMCGRLPF--YNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 241
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 122/232 (52%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV +V++K T + YAMK + K + +D + + L E +L HPFL L + FQ +
Sbjct: 23 GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD 82
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT-KHIIHRDIK 130
L V + GG+L +H++++ F D Y E+ ALDYL + K++++RD+K
Sbjct: 83 RLCFVMEYANGGELFFHLSRERVF-----SEDRARFYGAEIVSALDYLHSEKNVVYRDLK 137
Query: 131 PDNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
+N++LD++GH ITDF + +++ GT Y+APE+ E Y +VD
Sbjct: 138 LENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL-----EDNDYGRAVD 192
Query: 190 WWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
WW LGV ++E++ PF ++ K + I+ + +P K LLS
Sbjct: 193 WWGLGVVMYEMMCGRLPF--YNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 242
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 121/231 (52%), Gaps = 13/231 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV +V++K T + YAMK + K I +D + + + E +L HPFL L + FQ +
Sbjct: 24 GKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD 83
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L V + GG+L +H++++ F R Y E+ AL+YL ++ +++RDIK
Sbjct: 84 RLCFVMEYANGGELFFHLSRERVFTEERAR-----FYGAEIVSALEYLHSRDVVYRDIKL 138
Query: 132 DNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
+N++LD++GH ITDF + + + GT Y+APE+ E Y +VDW
Sbjct: 139 ENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL-----EDNDYGRAVDW 193
Query: 191 WSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
W LGV ++E++ PF ++ + + I+ + +P S K LL+
Sbjct: 194 WGLGVVMYEMMCGRLPF--YNQDHERLFELILMEEIRFPRTLSPEAKSLLA 242
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 123/232 (53%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV +V++K T + YAMK + K + +D + + L E +L HPFL L + FQ +
Sbjct: 165 GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD 224
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT-KHIIHRDIK 130
L V + GG+L +H++++ F D Y E+ ALDYL + K++++RD+K
Sbjct: 225 RLCFVMEYANGGELFFHLSRERVF-----SEDRARFYGAEIVSALDYLHSEKNVVYRDLK 279
Query: 131 PDNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
+N++LD++GH ITDF + +++ + GT Y+APE+ E Y +VD
Sbjct: 280 LENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL-----EDNDYGRAVD 334
Query: 190 WWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
WW LGV ++E++ PF ++ K + I+ + +P K LLS
Sbjct: 335 WWGLGVVMYEMMCGRLPF--YNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 384
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 122/232 (52%), Gaps = 14/232 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV +V++K T + YAMK + K + +D + + L E +L HPFL L + FQ +
Sbjct: 24 GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD 83
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT-KHIIHRDIK 130
L V + GG+L +H++++ F D Y E+ ALDYL + K++++RD+K
Sbjct: 84 RLCFVMEYANGGELFFHLSRERVF-----SEDRARFYGAEIVSALDYLHSEKNVVYRDLK 138
Query: 131 PDNILLDEEGHAHITDFNIATV-LEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
+N++LD++GH ITDF + +++ GT Y+APE+ E Y +VD
Sbjct: 139 LENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL-----EDNDYGRAVD 193
Query: 190 WWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLS 241
WW LGV ++E++ PF ++ K + I+ + +P K LLS
Sbjct: 194 WWGLGVVMYEMMCGRLPF--YNQDHEKLFELILMEEIRFPRTLGPEAKSLLS 243
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 109/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+FCFQD+E
Sbjct: 51 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDE 110
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 111 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 165
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 166 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 220
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 221 DLWALGCIIYQLVAGLPPF 239
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 108/200 (54%), Gaps = 10/200 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K+T+++YAMK ++K + ++R E ++L + ++ L + FQDE
Sbjct: 104 GEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDEN 163
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L++V D +GGDL +++ + D Y E+ LA+D + H +HRDIKP
Sbjct: 164 HLYLVMDYYVGGDLLTLLSK----FEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKP 219
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMS----GTKPYIAPEIFLVATDEVLGYSYS 187
DN+LLD GH + DF + L+ N T S GT YI+PEI D + Y
Sbjct: 220 DNVLLDVNGHIRLADF--GSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPE 277
Query: 188 VDWWSLGVTLFEILARGRPF 207
DWWSLGV ++E+L PF
Sbjct: 278 CDWWSLGVCMYEMLYGETPF 297
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 108/200 (54%), Gaps = 10/200 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K+T+++YAMK ++K + ++R E ++L + ++ L + FQDE
Sbjct: 88 GEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDEN 147
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L++V D +GGDL +++ + D Y E+ LA+D + H +HRDIKP
Sbjct: 148 HLYLVMDYYVGGDLLTLLSK----FEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKP 203
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMS----GTKPYIAPEIFLVATDEVLGYSYS 187
DN+LLD GH + DF + L+ N T S GT YI+PEI D + Y
Sbjct: 204 DNVLLDVNGHIRLADF--GSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPE 261
Query: 188 VDWWSLGVTLFEILARGRPF 207
DWWSLGV ++E+L PF
Sbjct: 262 CDWWSLGVCMYEMLYGETPF 281
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 122/235 (51%), Gaps = 14/235 (5%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLRE---MEILTTLEHPFLVNLWFC 66
G +V +K DT +MYAMK + K + + L E + +++T + PF+V + +
Sbjct: 201 GFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA 260
Query: 67 FQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIH 126
F + L + DL+ GGDL YH++Q F R YA E+ L L+++ + +++
Sbjct: 261 FHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR-----FYAAEIILGLEHMHNRFVVY 315
Query: 127 RDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY 186
RD+KP NILLDE GH I+D +A + + S+ GT Y+APE+ + + Y
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVL----QKGVAYDS 370
Query: 187 SVDWWSLGVTLFEILARGRPFDIHSNTSVKDV-KAIIYSPVHYPTAWSESTKHLL 240
S DW+SLG LF++L PF H ++ + + V P ++S + LL
Sbjct: 371 SADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 425
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 122/235 (51%), Gaps = 14/235 (5%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLRE---MEILTTLEHPFLVNLWFC 66
G +V +K DT +MYAMK + K + + L E + +++T + PF+V + +
Sbjct: 200 GFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA 259
Query: 67 FQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIH 126
F + L + DL+ GGDL YH++Q F R YA E+ L L+++ + +++
Sbjct: 260 FHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR-----FYAAEIILGLEHMHNRFVVY 314
Query: 127 RDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY 186
RD+KP NILLDE GH I+D +A + + S+ GT Y+APE+ + + Y
Sbjct: 315 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVL----QKGVAYDS 369
Query: 187 SVDWWSLGVTLFEILARGRPFDIHSNTSVKDV-KAIIYSPVHYPTAWSESTKHLL 240
S DW+SLG LF++L PF H ++ + + V P ++S + LL
Sbjct: 370 SADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 424
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 122/235 (51%), Gaps = 14/235 (5%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLRE---MEILTTLEHPFLVNLWFC 66
G +V +K DT +MYAMK + K + + L E + +++T + PF+V + +
Sbjct: 201 GFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA 260
Query: 67 FQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIH 126
F + L + DL+ GGDL YH++Q F R YA E+ L L+++ + +++
Sbjct: 261 FHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR-----FYAAEIILGLEHMHNRFVVY 315
Query: 127 RDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY 186
RD+KP NILLDE GH I+D +A + + S+ GT Y+APE+ + + Y
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVL----QKGVAYDS 370
Query: 187 SVDWWSLGVTLFEILARGRPFDIHSNTSVKDV-KAIIYSPVHYPTAWSESTKHLL 240
S DW+SLG LF++L PF H ++ + + V P ++S + LL
Sbjct: 371 SADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 425
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 122/235 (51%), Gaps = 14/235 (5%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLRE---MEILTTLEHPFLVNLWFC 66
G +V +K DT +MYAMK + K + + L E + +++T + PF+V + +
Sbjct: 201 GFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA 260
Query: 67 FQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIH 126
F + L + DL+ GGDL YH++Q F R YA E+ L L+++ + +++
Sbjct: 261 FHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR-----FYAAEIILGLEHMHNRFVVY 315
Query: 127 RDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY 186
RD+KP NILLDE GH I+D +A + + S+ GT Y+APE+ + + Y
Sbjct: 316 RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV-GTHGYMAPEVL----QKGVAYDS 370
Query: 187 SVDWWSLGVTLFEILARGRPFDIHSNTSVKDV-KAIIYSPVHYPTAWSESTKHLL 240
S DW+SLG LF++L PF H ++ + + V P ++S + LL
Sbjct: 371 SADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLL 425
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 120 bits (300), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 109/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 105
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 106 KLYFGLSYAKNGCLLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A S GT Y++PE+ + S S
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA-----SKSS 215
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 216 DLWALGCIIYQLVAGLPPF 234
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 120 bits (300), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 109/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 47 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 106
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 107 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 161
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A S GT Y++PE+ + S
Sbjct: 162 ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA-----CKSS 216
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 217 DLWALGCIIYQLVAGLPPF 235
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 109/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 43 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 102
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 103 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 157
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A S GT Y++PE+ + S
Sbjct: 158 ENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA-----CKSS 212
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 213 DLWALGCIIYQLVAGLPPF 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 122/235 (51%), Gaps = 15/235 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 49 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 108
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 109 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 163
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 164 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 218
Query: 189 DWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
D W+LG +++++A PF + + + II +P A+ + L+ ++
Sbjct: 219 DLWALGCIIYQLVAGLPPFRAGNEYLI--FQKIIKLEYDFPAAFFPKARDLVEKL 271
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 123/236 (52%), Gaps = 10/236 (4%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +VC Q + T +MYA K + K + +R L E +IL + F+V+L + ++
Sbjct: 196 GFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET 255
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
++ L +V L+ GGDL++HI G YA E+ L+ L + I++RD+
Sbjct: 256 KDALCLVLTLMNGGDLKFHIYH---MGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDL 312
Query: 130 KPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
KP+NILLD+ GH I+D +A + E Q GT Y+APE+ V + Y++S D
Sbjct: 313 KPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV--VKNER---YTFSPD 367
Query: 190 WWSLGVTLFEILARGRPFDIHSNT-SVKDVKAIIYS-PVHYPTAWSESTKHLLSQV 243
WW+LG L+E++A PF ++V+ ++ P Y +S + L SQ+
Sbjct: 368 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQL 423
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 109/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 44 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 103
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 104 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A + GT Y++PE+ + S
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA-----CKSS 213
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 214 DLWALGCIIYQLVAGLPPF 232
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 123/236 (52%), Gaps = 10/236 (4%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +VC Q + T +MYA K + K + +R L E +IL + F+V+L + ++
Sbjct: 196 GFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET 255
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
++ L +V L+ GGDL++HI G YA E+ L+ L + I++RD+
Sbjct: 256 KDALCLVLTLMNGGDLKFHIYH---MGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDL 312
Query: 130 KPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
KP+NILLD+ GH I+D +A + E Q GT Y+APE+ V + Y++S D
Sbjct: 313 KPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV--VKNER---YTFSPD 367
Query: 190 WWSLGVTLFEILARGRPFDIHSNT-SVKDVKAIIYS-PVHYPTAWSESTKHLLSQV 243
WW+LG L+E++A PF ++V+ ++ P Y +S + L SQ+
Sbjct: 368 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQL 423
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 130/240 (54%), Gaps = 19/240 (7%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQCIERDA--LKNVLREMEILTTLEHPFLVNLW 64
G KV V+K +T +++AMK + K+ + R+A + E IL ++HPF+V+L
Sbjct: 29 GYGKVFQVRKVTGANTGKIFAMKVLKKAMIV-RNAKDTAHTKAERNILEEVKHPFIVDLI 87
Query: 65 FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHI 124
+ FQ L+++ + L GG+L + ++ F DT Y E+ +AL +L K I
Sbjct: 88 YAFQTGGKLYLILEYLSGGELFMQLEREGIFME-----DTACFYLAEISMALGHLHQKGI 142
Query: 125 IHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
I+RD+KP+NI+L+ +GH +TDF + + + + + GT Y+APEI + + G
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRS-----G 197
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
++ +VDWWSLG ++++L PF K + I+ ++ P ++ + LL ++
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPPFT--GENRKKTIDKILKCKLNLPPYLTQEARDLLKKL 255
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 105
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 106 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----XKSS 215
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 216 DLWALGCIIYQLVAGLPPF 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 47 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 106
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 107 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 161
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 162 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 216
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 217 DLWALGCIIYQLVAGLPPF 235
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 118 bits (295), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 105
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 106 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 215
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 216 DLWALGCIIYQLVAGLPPF 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 44 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 103
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 104 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 213
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 214 DLWALGCIIYQLVAGLPPF 232
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 105
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 106 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 215
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 216 DLWALGCIIYQLVAGLPPF 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 105
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 106 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 215
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 216 DLWALGCIIYQLVAGLPPF 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 46 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 105
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 106 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 160
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 161 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 215
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 216 DLWALGCIIYQLVAGLPPF 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 44 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 103
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 104 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 213
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 214 DLWALGCIIYQLVAGLPPF 232
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 28 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 87
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 88 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 142
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 143 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 197
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 198 DLWALGCIIYQLVAGLPPF 216
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 21 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 80
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 81 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 135
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 136 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 190
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 191 DLWALGCIIYQLVAGLPPF 209
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 43 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 102
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 103 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 157
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 158 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 212
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 213 DLWALGCIIYQLVAGLPPF 231
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 23 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 82
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 83 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 137
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 138 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 192
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 193 DLWALGCIIYQLVAGLPPF 211
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 24 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 83
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 84 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 138
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 139 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 193
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 194 DLWALGCIIYQLVAGLPPF 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S V + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 22 STVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 81
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 82 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 136
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 137 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 191
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 192 DLWALGCIIYQLVAGLPPF 210
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 129/240 (53%), Gaps = 19/240 (7%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQCIERDA--LKNVLREMEILTTLEHPFLVNLW 64
G KV V+K +T +++AMK + K+ + R+A + E IL ++HPF+V+L
Sbjct: 29 GYGKVFQVRKVTGANTGKIFAMKVLKKAMIV-RNAKDTAHTKAERNILEEVKHPFIVDLI 87
Query: 65 FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHI 124
+ FQ L+++ + L GG+L + ++ F DT Y E+ +AL +L K I
Sbjct: 88 YAFQTGGKLYLILEYLSGGELFMQLEREGIFME-----DTACFYLAEISMALGHLHQKGI 142
Query: 125 IHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
I+RD+KP+NI+L+ +GH +TDF + + + + GT Y+APEI + + G
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRS-----G 197
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
++ +VDWWSLG ++++L PF K + I+ ++ P ++ + LL ++
Sbjct: 198 HNRAVDWWSLGALMYDMLTGAPPFT--GENRKKTIDKILKCKLNLPPYLTQEARDLLKKL 255
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 132/231 (57%), Gaps = 9/231 (3%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +V Q K T ++YA K ++K + +R + + E +IL + F+V+L + F+
Sbjct: 197 GFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET 256
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
+ DL +V ++ GGD+RYHI ++ + G + Y ++ L++L ++II+RD+
Sbjct: 257 KTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDL 315
Query: 130 KPDNILLDEEGHAHITDFNIATVLEENQLAT-SMSGTKPYIAPEIFLVATDEVLGYSYSV 188
KP+N+LLD++G+ I+D +A L+ Q T +GT ++APE+ L Y +SV
Sbjct: 316 KPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE-----YDFSV 370
Query: 189 DWWSLGVTLFEILARGRPFDIHS-NTSVKDVKA-IIYSPVHYPTAWSESTK 237
D+++LGVTL+E++A PF K++K ++ V YP +S ++K
Sbjct: 371 DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 117 bits (293), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 132/231 (57%), Gaps = 9/231 (3%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +V Q K T ++YA K ++K + +R + + E +IL + F+V+L + F+
Sbjct: 197 GFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET 256
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
+ DL +V ++ GGD+RYHI ++ + G + Y ++ L++L ++II+RD+
Sbjct: 257 KTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDL 315
Query: 130 KPDNILLDEEGHAHITDFNIATVLEENQLAT-SMSGTKPYIAPEIFLVATDEVLGYSYSV 188
KP+N+LLD++G+ I+D +A L+ Q T +GT ++APE+ L Y +SV
Sbjct: 316 KPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE-----YDFSV 370
Query: 189 DWWSLGVTLFEILARGRPFDIHS-NTSVKDVKA-IIYSPVHYPTAWSESTK 237
D+++LGVTL+E++A PF K++K ++ V YP +S ++K
Sbjct: 371 DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 117 bits (292), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 132/231 (57%), Gaps = 9/231 (3%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +V Q K T ++YA K ++K + +R + + E +IL + F+V+L + F+
Sbjct: 197 GFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET 256
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
+ DL +V ++ GGD+RYHI ++ + G + Y ++ L++L ++II+RD+
Sbjct: 257 KTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDL 315
Query: 130 KPDNILLDEEGHAHITDFNIATVLEENQLAT-SMSGTKPYIAPEIFLVATDEVLGYSYSV 188
KP+N+LLD++G+ I+D +A L+ Q T +GT ++APE+ L Y +SV
Sbjct: 316 KPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE-----YDFSV 370
Query: 189 DWWSLGVTLFEILARGRPFDIHS-NTSVKDVKA-IIYSPVHYPTAWSESTK 237
D+++LGVTL+E++A PF K++K ++ V YP +S ++K
Sbjct: 371 DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 132/231 (57%), Gaps = 9/231 (3%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +V Q K T ++YA K ++K + +R + + E +IL + F+V+L + F+
Sbjct: 197 GFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET 256
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
+ DL +V ++ GGD+RYHI ++ + G + Y ++ L++L ++II+RD+
Sbjct: 257 KTDLCLVMTIMNGGDIRYHIY-NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDL 315
Query: 130 KPDNILLDEEGHAHITDFNIATVLEENQLAT-SMSGTKPYIAPEIFLVATDEVLGYSYSV 188
KP+N+LLD++G+ I+D +A L+ Q T +GT ++APE+ L Y +SV
Sbjct: 316 KPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE-----YDFSV 370
Query: 189 DWWSLGVTLFEILARGRPFDIHS-NTSVKDVKA-IIYSPVHYPTAWSESTK 237
D+++LGVTL+E++A PF K++K ++ V YP +S ++K
Sbjct: 371 DYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASK 421
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 126/248 (50%), Gaps = 18/248 (7%)
Query: 3 CGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
CG K K C KK ++ + + E D NV E+EIL L HP ++
Sbjct: 23 CGEVKLAFERKTC---KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK 79
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
+ F D ED ++V +L+ GG+L + + + + T LY +++ LA+ YL
Sbjct: 80 IKNFF-DAEDYYIVLELMEGGELFDKVVGNKRL-----KEATCKLYFYQMLLAVQYLHEN 133
Query: 123 HIIHRDIKPDNILL---DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATD 179
IIHRD+KP+N+LL +E+ ITDF + +L E L ++ GT Y+APE+ +
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG- 192
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPFDIH-SNTSVKDVKAIIYSPVHY-PTAWSESTK 237
GY+ +VD WSLGV LF L+ PF H + S+KD I ++ P W+E ++
Sbjct: 193 -TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD--QITSGKYNFIPEVWAEVSE 249
Query: 238 HLLSQVHR 245
L V +
Sbjct: 250 KALDLVKK 257
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 117 bits (292), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 126/248 (50%), Gaps = 18/248 (7%)
Query: 3 CGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
CG K K C KK ++ + + E D NV E+EIL L HP ++
Sbjct: 23 CGEVKLAFERKTC---KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK 79
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
+ F D ED ++V +L+ GG+L + + + + T LY +++ LA+ YL
Sbjct: 80 IKNFF-DAEDYYIVLELMEGGELFDKVVGNKRL-----KEATCKLYFYQMLLAVQYLHEN 133
Query: 123 HIIHRDIKPDNILL---DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATD 179
IIHRD+KP+N+LL +E+ ITDF + +L E L ++ GT Y+APE+ +
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG- 192
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPFDIH-SNTSVKDVKAIIYSPVHY-PTAWSESTK 237
GY+ +VD WSLGV LF L+ PF H + S+KD I ++ P W+E ++
Sbjct: 193 -TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD--QITSGKYNFIPEVWAEVSE 249
Query: 238 HLLSQVHR 245
L V +
Sbjct: 250 KALDLVKK 257
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 117 bits (292), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 126/248 (50%), Gaps = 18/248 (7%)
Query: 3 CGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
CG K K C KK ++ + + E D NV E+EIL L HP ++
Sbjct: 22 CGEVKLAFERKTC---KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK 78
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
+ F D ED ++V +L+ GG+L + + + + T LY +++ LA+ YL
Sbjct: 79 IKNFF-DAEDYYIVLELMEGGELFDKVVGNKRL-----KEATCKLYFYQMLLAVQYLHEN 132
Query: 123 HIIHRDIKPDNILL---DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATD 179
IIHRD+KP+N+LL +E+ ITDF + +L E L ++ GT Y+APE+ +
Sbjct: 133 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG- 191
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPFDIH-SNTSVKDVKAIIYSPVHY-PTAWSESTK 237
GY+ +VD WSLGV LF L+ PF H + S+KD I ++ P W+E ++
Sbjct: 192 -TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD--QITSGKYNFIPEVWAEVSE 248
Query: 238 HLLSQVHR 245
L V +
Sbjct: 249 KALDLVKK 256
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 126/248 (50%), Gaps = 18/248 (7%)
Query: 3 CGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
CG K K C KK ++ + + E D NV E+EIL L HP ++
Sbjct: 23 CGEVKLAFERKTC---KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK 79
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
+ F D ED ++V +L+ GG+L + + + + T LY +++ LA+ YL
Sbjct: 80 IKNFF-DAEDYYIVLELMEGGELFDKVVGNKRL-----KEATCKLYFYQMLLAVQYLHEN 133
Query: 123 HIIHRDIKPDNILL---DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATD 179
IIHRD+KP+N+LL +E+ ITDF + +L E L ++ GT Y+APE+ +
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG- 192
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPFDIH-SNTSVKDVKAIIYSPVHY-PTAWSESTK 237
GY+ +VD WSLGV LF L+ PF H + S+KD I ++ P W+E ++
Sbjct: 193 -TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD--QITSGKYNFIPEVWAEVSE 249
Query: 238 HLLSQVHR 245
L V +
Sbjct: 250 KALDLVKK 257
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 126/248 (50%), Gaps = 18/248 (7%)
Query: 3 CGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
CG K K C KK ++ + + E D NV E+EIL L HP ++
Sbjct: 29 CGEVKLAFERKTC---KKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK 85
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
+ F D ED ++V +L+ GG+L + + + + T LY +++ LA+ YL
Sbjct: 86 IKNFF-DAEDYYIVLELMEGGELFDKVVGNKRL-----KEATCKLYFYQMLLAVQYLHEN 139
Query: 123 HIIHRDIKPDNILL---DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATD 179
IIHRD+KP+N+LL +E+ ITDF + +L E L ++ GT Y+APE+ +
Sbjct: 140 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG- 198
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPFDIH-SNTSVKDVKAIIYSPVHY-PTAWSESTK 237
GY+ +VD WSLGV LF L+ PF H + S+KD I ++ P W+E ++
Sbjct: 199 -TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD--QITSGKYNFIPEVWAEVSE 255
Query: 238 HLLSQVHR 245
L V +
Sbjct: 256 KALDLVKK 263
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 107/199 (53%), Gaps = 13/199 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S + ++ T + YA+K + K I+ + + V RE ++++ L+HPF V L+F FQD+E
Sbjct: 44 STTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE 103
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+ G+L +I + F TR Y E+ AL+YL K IIHRD+KP
Sbjct: 104 KLYFGLSYAKNGELLKYIRKIGSFDETCTR-----FYTAEIVSALEYLHGKGIIHRDLKP 158
Query: 132 DNILLDEEGHAHITDFNIATVL--EENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+NILL+E+ H ITDF A VL E Q A GT Y++PE+ + S
Sbjct: 159 ENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA-----CKSS 213
Query: 189 DWWSLGVTLFEILARGRPF 207
D W+LG +++++A PF
Sbjct: 214 DLWALGCIIYQLVAGLPPF 232
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 128/248 (51%), Gaps = 18/248 (7%)
Query: 3 CGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
CG K K C KK ++ + + E D NV E+EIL L HP ++
Sbjct: 148 CGEVKLAFERKTC---KKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK 204
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
+ F D ED ++V +L+ GG+L + + + + T LY +++ LA+ YL
Sbjct: 205 IKNFF-DAEDYYIVLELMEGGELFDKVVGNKRL-----KEATCKLYFYQMLLAVQYLHEN 258
Query: 123 HIIHRDIKPDNILL---DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATD 179
IIHRD+KP+N+LL +E+ ITDF + +L E L ++ GT Y+APE+ +
Sbjct: 259 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG- 317
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPFDIH-SNTSVKD-VKAIIYSPVHYPTAWSESTK 237
GY+ +VD WSLGV LF L+ PF H + S+KD + + Y+ + P W+E ++
Sbjct: 318 -TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI--PEVWAEVSE 374
Query: 238 HLLSQVHR 245
L V +
Sbjct: 375 KALDLVKK 382
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 128/248 (51%), Gaps = 18/248 (7%)
Query: 3 CGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
CG K K C KK ++ + + E D NV E+EIL L HP ++
Sbjct: 162 CGEVKLAFERKTC---KKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIK 218
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
+ F D ED ++V +L+ GG+L + + + + T LY +++ LA+ YL
Sbjct: 219 IKNFF-DAEDYYIVLELMEGGELFDKVVGNKRL-----KEATCKLYFYQMLLAVQYLHEN 272
Query: 123 HIIHRDIKPDNILL---DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATD 179
IIHRD+KP+N+LL +E+ ITDF + +L E L ++ GT Y+APE+ +
Sbjct: 273 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVG- 331
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPFDIH-SNTSVKD-VKAIIYSPVHYPTAWSESTK 237
GY+ +VD WSLGV LF L+ PF H + S+KD + + Y+ + P W+E ++
Sbjct: 332 -TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI--PEVWAEVSE 388
Query: 238 HLLSQVHR 245
L V +
Sbjct: 389 KALDLVKK 396
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K T+++YAMK + K + I+R E +I+ P++V L++ FQD+
Sbjct: 88 GEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 147
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+MV + + GGDL ++ Y V + Y E+ LALD + + IHRD+KP
Sbjct: 148 YLYMVMEYMPGGDLVNLMSN----YDVPEK--WARFYTAEVVLALDAIHSMGFIHRDVKP 201
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLAT--SMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
DN+LLD+ GH + DF + + + + GT YI+PE+ + Y D
Sbjct: 202 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY-YGRECD 260
Query: 190 WWSLGVTLFEILARGRPF 207
WWS+GV L+E+L PF
Sbjct: 261 WWSVGVFLYEMLVGDTPF 278
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K T+++YAMK + K + I+R E +I+ P++V L++ FQD+
Sbjct: 88 GEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 147
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+MV + + GGDL ++ Y V + Y E+ LALD + + IHRD+KP
Sbjct: 148 YLYMVMEYMPGGDLVNLMSN----YDVPEK--WARFYTAEVVLALDAIHSMGFIHRDVKP 201
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLAT--SMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
DN+LLD+ GH + DF + + + + GT YI+PE+ + Y D
Sbjct: 202 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY-YGRECD 260
Query: 190 WWSLGVTLFEILARGRPF 207
WWS+GV L+E+L PF
Sbjct: 261 WWSVGVFLYEMLVGDTPF 278
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 106/198 (53%), Gaps = 9/198 (4%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K T+++YAMK + K + I+R E +I+ P++V L++ FQD+
Sbjct: 83 GEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+MV + + GGDL ++ Y V + Y E+ LALD + + IHRD+KP
Sbjct: 143 YLYMVMEYMPGGDLVNLMSN----YDVPEK--WARFYTAEVVLALDAIHSMGFIHRDVKP 196
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLAT--SMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
DN+LLD+ GH + DF + + + + GT YI+PE+ + Y D
Sbjct: 197 DNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY-YGRECD 255
Query: 190 WWSLGVTLFEILARGRPF 207
WWS+GV L+E+L PF
Sbjct: 256 WWSVGVFLYEMLVGDTPF 273
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 9/198 (4%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K ++++YAMK + K + I+R E +I+ P++V L+ FQD++
Sbjct: 89 GEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK 148
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+MV + + GGDL ++ Y V + Y E+ LALD + + +IHRD+KP
Sbjct: 149 YLYMVMEYMPGGDLVNLMSN----YDVPEK--WAKFYTAEVVLALDAIHSMGLIHRDVKP 202
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLA--TSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
DN+LLD+ GH + DF ++E + + GT YI+PE+ + Y D
Sbjct: 203 DNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGY-YGRECD 261
Query: 190 WWSLGVTLFEILARGRPF 207
WWS+GV LFE+L PF
Sbjct: 262 WWSVGVFLFEMLVGDTPF 279
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 109/198 (55%), Gaps = 6/198 (3%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V +V+ K+ +++AMK ++K + ++R E ++L + ++ L + FQD+
Sbjct: 88 GEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN 147
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L++V D +GGDL +++ + + Y E+ +A+D + H +HRDIKP
Sbjct: 148 NLYLVMDYYVGGDLLTLLSK----FEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKP 203
Query: 132 DNILLDEEGHAHITDF-NIATVLEENQLATSMS-GTKPYIAPEIFLVATDEVLGYSYSVD 189
DNIL+D GH + DF + ++E+ + +S++ GT YI+PEI Y D
Sbjct: 204 DNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECD 263
Query: 190 WWSLGVTLFEILARGRPF 207
WWSLGV ++E+L PF
Sbjct: 264 WWSLGVCMYEMLYGETPF 281
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 113/222 (50%), Gaps = 14/222 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
S+V +V+ K T Q+YAMK M+K ++R + E ++L + ++ L F FQDE
Sbjct: 75 SEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN 134
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTR--NDTIHLYAFELGLALDYLKTKHIIHRDI 129
L++V + +GGDL +T KF G R + Y E+ +A+D + +HRDI
Sbjct: 135 YLYLVMEYYVGGDL---LTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDI 188
Query: 130 KPDNILLDEEGHAHITDFNIATVLEENQLATSM--SGTKPYIAPEIF--LVATDEVLGYS 185
KPDNILLD GH + DF L + S+ GT Y++PEI + Y
Sbjct: 189 KPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYG 248
Query: 186 YSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVH 227
DWW+LGV +E+ PF +++++ + I++ H
Sbjct: 249 PECDWWALGVFAYEMFYGQTPF--YADSTAETYGKIVHYKEH 288
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 22 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G++ + + KF T Y EL AL Y +K
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT-----YITELANALSYCHSKR 133
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T++ GT Y+ PE+ E
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMI-----EGRM 187
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 245
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 117/240 (48%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 18 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 129
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF + ++ T++SGT Y+ PE+ E
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR-RTTLSGTLDYLPPEMI-----EGRM 183
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 241
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 18/244 (7%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLR-EMEILTTLEHPFLVN 62
G KF V + ++K K + A+K + KSQ +E++ +++ LR E+EI + L HP ++
Sbjct: 23 GKGKF---GNVYLAREKQNKFIMALKVLFKSQ-LEKEGVEHQLRREIEIQSHLRHPNILR 78
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
++ F D + ++++ + G+L + + +F R+ T + EL AL Y +
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE--QRSAT---FMEELADALHYCHER 133
Query: 123 HIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
+IHRDIKP+N+L+ +G I DF +V + M GT Y+ PE+ T
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGW-SVHAPSLRRRXMCGTLDYLPPEMIEGKT---- 188
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQ 242
+ VD W GV +E L PFD S+T + I+ + +P S+ +K L+S+
Sbjct: 189 -HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH--RRIVNVDLKFPPFLSDGSKDLISK 245
Query: 243 VHRY 246
+ RY
Sbjct: 246 LLRY 249
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 18/244 (7%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLR-EMEILTTLEHPFLVN 62
G KF V + ++K K + A+K + KSQ +E++ +++ LR E+EI + L HP ++
Sbjct: 24 GKGKF---GNVYLAREKQNKFIMALKVLFKSQ-LEKEGVEHQLRREIEIQSHLRHPNILR 79
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
++ F D + ++++ + G+L + + +F R+ T + EL AL Y +
Sbjct: 80 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE--QRSAT---FMEELADALHYCHER 134
Query: 123 HIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
+IHRDIKP+N+L+ +G I DF +V + M GT Y+ PE+ T
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGW-SVHAPSLRRRXMCGTLDYLPPEMIEGKT---- 189
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQ 242
+ VD W GV +E L PFD S+T + I+ + +P S+ +K L+S+
Sbjct: 190 -HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH--RRIVNVDLKFPPFLSDGSKDLISK 246
Query: 243 VHRY 246
+ RY
Sbjct: 247 LLRY 250
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 125/244 (51%), Gaps = 18/244 (7%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLR-EMEILTTLEHPFLVN 62
G KF V + ++K K + A+K + KSQ +E++ +++ LR E+EI + L HP ++
Sbjct: 23 GKGKF---GNVYLAREKQNKFIMALKVLFKSQ-LEKEGVEHQLRREIEIQSHLRHPNILR 78
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
++ F D + ++++ + G+L + + +F R+ T + EL AL Y +
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE--QRSAT---FMEELADALHYCHER 133
Query: 123 HIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
+IHRDIKP+N+L+ +G I DF +V + M GT Y+ PE+ T
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGW-SVHAPSLRRRXMCGTLDYLPPEMIEGKT---- 188
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQ 242
+ VD W GV +E L PFD S+T + I+ + +P S+ +K L+S+
Sbjct: 189 -HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH--RRIVNVDLKFPPFLSDGSKDLISK 245
Query: 243 VHRY 246
+ RY
Sbjct: 246 LLRY 249
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 21 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 132
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T++ GT Y+ PE+ E
Sbjct: 133 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMI-----EGRM 186
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 244
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 17 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 128
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T++ GT Y+ PE+ E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMI-----EGRM 182
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 240
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 16 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 73 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 127
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T++ GT Y+ PE+ E
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMI-----EGRM 181
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 239
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 20 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 131
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T++ GT Y+ PE+ E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMI-----EGRM 185
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 243
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 20 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 131
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T++ GT Y+ PE+ E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMI-----EGRM 185
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 243
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 101/189 (53%), Gaps = 15/189 (7%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLL 81
T+Q YA+K ++K+ +D +LRE+E+L L+HP ++ L+ +D ++V +L
Sbjct: 46 TQQEYAVKVINKASAKNKDT-STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYT 104
Query: 82 GGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILL---DE 138
GG+L I + +F + +D + ++ + Y+ +I+HRD+KP+NILL ++
Sbjct: 105 GGELFDEIIKRKRF----SEHDAARIIK-QVFSGITYMHKHNIVHRDLKPENILLESKEK 159
Query: 139 EGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLF 198
+ I DF ++T ++N GT YIAPE+ DE D WS GV L+
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE------KCDVWSAGVILY 213
Query: 199 EILARGRPF 207
+L+ PF
Sbjct: 214 ILLSGTPPF 222
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 22 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 133
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T++ GT Y+ PE+ E
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMI-----EGRM 187
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 245
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 101/189 (53%), Gaps = 15/189 (7%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLL 81
T+Q YA+K ++K+ +D +LRE+E+L L+HP ++ L+ +D ++V +L
Sbjct: 46 TQQEYAVKVINKASAKNKDT-STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYT 104
Query: 82 GGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILL---DE 138
GG+L I + +F + +D + ++ + Y+ +I+HRD+KP+NILL ++
Sbjct: 105 GGELFDEIIKRKRF----SEHDAARIIK-QVFSGITYMHKHNIVHRDLKPENILLESKEK 159
Query: 139 EGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLF 198
+ I DF ++T ++N GT YIAPE+ DE D WS GV L+
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE------KCDVWSAGVILY 213
Query: 199 EILARGRPF 207
+L+ PF
Sbjct: 214 ILLSGTPPF 222
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 22 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 133
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T++ GT Y+ PE E
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEXI-----EGRX 187
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 245
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 17 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 128
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T + GT Y+ PE+ E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTDLCGTLDYLPPEMI-----EGRM 182
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 240
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 22 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 79 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 133
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T + GT Y+ PE+ E
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTDLCGTLDYLPPEMI-----EGRM 187
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 245
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 17 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 128
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T + GT Y+ PE+ E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTELCGTLDYLPPEMI-----EGRM 182
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 240
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 17 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 128
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T + GT Y+ PE+ E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTXLCGTLDYLPPEMI-----EGRM 182
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 240
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 17 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 128
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T + GT Y+ PE+ E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTDLCGTLDYLPPEMI-----EGRM 182
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 240
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 18 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 129
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T + GT Y+ PE+ E
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTDLCGTLDYLPPEMI-----EGRM 183
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 241
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 115/240 (47%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 14 GKGKF---GNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 71 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 125
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T++ GT Y+ PE+ E
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMI-----EGRM 179
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 237
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 34 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 91 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 145
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T++ GT Y+ PE+ E
Sbjct: 146 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMI-----EGRM 199
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 257
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 7/163 (4%)
Query: 47 REMEILTTLE-HPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
RE IL + HP ++ L ++ +F+V DL+ G+L ++T+ + TR+
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMR 207
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
L A+ +L +I+HRD+KP+NILLD+ ++DF + LE + + GT
Sbjct: 208 SLLE-----AVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGT 262
Query: 166 KPYIAPEIFLVATDEV-LGYSYSVDWWSLGVTLFEILARGRPF 207
Y+APEI + DE GY VD W+ GV LF +LA PF
Sbjct: 263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 18/244 (7%)
Query: 4 GSSKFCGT-SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
G + GT KV I + + T A+K +++ + D + + RE++ L HP ++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L+ D FMV + + GG+L +I + + + R + + A+DY
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS-----AVDYCHRH 130
Query: 123 HIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
++HRD+KP+N+LLD +A I DF ++ ++ + + + G+ Y APE+ +
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEV-------IS 183
Query: 183 GYSYS---VDWWSLGVTLFEILARGRPF-DIHSNTSVKDVK-AIIYSPVHYPTAWSESTK 237
G Y+ VD WS GV L+ +L PF D H T K ++ + Y P + + +
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLM 243
Query: 238 HLLS 241
H+L
Sbjct: 244 HMLQ 247
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 43 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 154
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T++ GT Y+ PE+ E
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMI-----EGRM 208
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 266
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 22 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G++ + + KF T Y EL AL Y +K
Sbjct: 79 YGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT-----YITELANALSYCHSKR 133
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + + GT Y+ PE+ E
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRXXLXGTLDYLPPEMI-----EGRM 187
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 245
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 17 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 128
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF + ++ A ++ GT Y+ PE+ E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMI-----EGRM 182
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 240
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 20 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 131
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF + ++ A ++ GT Y+ PE+ E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMI-----EGRM 185
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 243
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 101/189 (53%), Gaps = 15/189 (7%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLL 81
T+Q YA+K ++K+ +D +LRE+E+L L+HP ++ L+ +D ++V +L
Sbjct: 46 TQQEYAVKVINKASAKNKDT-STILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYT 104
Query: 82 GGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILL---DE 138
GG+L I + +F + +D + ++ + Y+ +I+HRD+KP+NILL ++
Sbjct: 105 GGELFDEIIKRKRF----SEHDAARIIK-QVFSGITYMHKHNIVHRDLKPENILLESKEK 159
Query: 139 EGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLF 198
+ I DF ++T ++N GT YIAPE+ DE D WS GV L+
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDE------KCDVWSAGVILY 213
Query: 199 EILARGRPF 207
+L+ PF
Sbjct: 214 ILLSGTPPF 222
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K++K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 17 GKGKF---GNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 74 YGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKK 128
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF + ++ A ++ GT Y+ PE+ E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-ALCGTLDYLPPEMI-----EGRM 182
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT K I +P +E + L+S++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQDTYKRISRVEFTFPDFVTEGARDLISRL 240
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 20 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 131
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I +F +V + T++ GT Y+ PE+ E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIANFGW-SVHAPSSRRTTLCGTLDYLPPEMI-----EGRM 185
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 243
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 116/244 (47%), Gaps = 18/244 (7%)
Query: 4 GSSKFCGT-SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
G + GT KV I + + T A+K +++ + D + + RE++ L HP ++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L+ D FMV + + GG+L +I + + + R + + A+DY
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS-----AVDYCHRH 130
Query: 123 HIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
++HRD+KP+N+LLD +A I DF ++ ++ + + G+ Y APE+ +
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEV-------IS 183
Query: 183 GYSYS---VDWWSLGVTLFEILARGRPF-DIHSNTSVKDVK-AIIYSPVHYPTAWSESTK 237
G Y+ VD WS GV L+ +L PF D H T K ++ + Y P + + +
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLM 243
Query: 238 HLLS 241
H+L
Sbjct: 244 HMLQ 247
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 116/240 (48%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 19 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 130
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I +F +V + T++ GT Y+ PE+ E
Sbjct: 131 VIHRDIKPENLLLGSAGELKIANFGW-SVHAPSSRRTTLCGTLDYLPPEMI-----EGRM 184
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 242
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 93.6 bits (231), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 18 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 75 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 129
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + ++ GT Y+ PE+ E
Sbjct: 130 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRDTLCGTLDYLPPEMI-----EGRM 183
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 241
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 18/210 (8%)
Query: 10 GTSKVCIVQKK---DTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFC 66
G+ +VQ K+ A+K ++ +C + ++ +L+E++ ++ HP +V+ +
Sbjct: 19 GSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 67 FQDEEDLFMVSDLLLGG---DLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
F +++L++V LL GG D+ HI + S TI E+ L+YL
Sbjct: 77 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 136
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLE------ENQLATSMSGTKPYIAPEIFLVA 177
IHRD+K NILL E+G I DF ++ L N++ + GT ++APE+
Sbjct: 137 QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM--- 193
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++V GY + D WS G+T E+ P+
Sbjct: 194 -EQVRGYDFKADIWSFGITAIELATGAAPY 222
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 118/244 (48%), Gaps = 18/244 (7%)
Query: 4 GSSKFCGT-SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
G + GT KV + + + T A+K +++ + D + + RE++ L HP ++
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L+ D+FMV + + GG+L +I ++ + +R L+ L +DY
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRR----LFQQILS-GVDYCHRH 135
Query: 123 HIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
++HRD+KP+N+LLD +A I DF ++ ++ + + G+ Y APE+ +
Sbjct: 136 MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEV-------IS 188
Query: 183 GYSYS---VDWWSLGVTLFEILARGRPF-DIHSNTSVKDV-KAIIYSPVHYPTAWSESTK 237
G Y+ VD WS GV L+ +L PF D H T K + I Y+P + + K
Sbjct: 189 GRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLK 248
Query: 238 HLLS 241
H+L
Sbjct: 249 HMLQ 252
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 18/210 (8%)
Query: 10 GTSKVCIVQKK---DTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFC 66
G+ +VQ K+ A+K ++ +C + ++ +L+E++ ++ HP +V+ +
Sbjct: 24 GSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 67 FQDEEDLFMVSDLLLGG---DLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
F +++L++V LL GG D+ HI + S TI E+ L+YL
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 141
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLE------ENQLATSMSGTKPYIAPEIFLVA 177
IHRD+K NILL E+G I DF ++ L N++ + GT ++APE+
Sbjct: 142 QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM--- 198
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++V GY + D WS G+T E+ P+
Sbjct: 199 -EQVRGYDFKADIWSFGITAIELATGAAPY 227
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 20 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 131
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + + GT Y+ PE+ E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRXXLCGTLDYLPPEMI-----EGRM 185
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 243
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 17 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 74 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 128
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + + GT Y+ PE+ E
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRXXLCGTLDYLPPEMI-----EGRM 182
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 240
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 19 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 76 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 130
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + + GT Y+ PE+ E
Sbjct: 131 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRXXLCGTLDYLPPEMI-----EGRM 184
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 242
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 20 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 77 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 131
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + + GT Y+ PE+ E
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRDDLCGTLDYLPPEMI-----EGRM 185
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 243
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 118/241 (48%), Gaps = 18/241 (7%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + +++ +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 21 GKGKF---GNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + +F T Y EL AL Y +K
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTAT-----YITELANALSYCHSKR 132
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + T++ GT Y+ PE+ E
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGW-SVHAPSSRRTTLCGTLDYLPPEMI-----EGRM 186
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHS-NTSVKDVKAIIYSPVHYPTAWSESTKHLLSQ 242
+ VD WSLGV +E L PF+ H+ + + + + ++ +P +E + L+S+
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT---FPDFVTEGARDLISR 243
Query: 243 V 243
+
Sbjct: 244 L 244
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + K T Q A+K + K Q ++ +++LRE+++L L+HP ++ L+ F+D+
Sbjct: 46 GEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG 105
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++V ++ GG+L I +F V + + + Y+ I+HRD+KP
Sbjct: 106 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS-----GITYMHKNKIVHRDLKP 160
Query: 132 DNILLD---EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LL+ ++ + I DF ++T E ++ GT YIAPE+ DE
Sbjct: 161 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE------KC 214
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WS GV L+ +L+ PF+
Sbjct: 215 DVWSTGVILYILLSGCPPFN 234
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 16/240 (6%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + ++K +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 43 GKGKF---GNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + KF T Y EL AL Y +K
Sbjct: 100 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT-----YITELANALSYCHSKR 154
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + + GT Y+ PE+ E
Sbjct: 155 VIHRDIKPENLLLGSAGELKIADFGW-SVHAPSSRRDDLCGTLDYLPPEMI-----EGRM 208
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
+ VD WSLGV +E L PF+ +NT + K I +P +E + L+S++
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFPDFVTEGARDLISRL 266
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + K T Q A+K + K Q ++ +++LRE+++L L+HP ++ L+ F+D+
Sbjct: 63 GEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG 122
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++V ++ GG+L I +F V + + + Y+ I+HRD+KP
Sbjct: 123 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS-----GITYMHKNKIVHRDLKP 177
Query: 132 DNILLD---EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LL+ ++ + I DF ++T E ++ GT YIAPE+ DE
Sbjct: 178 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE------KC 231
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WS GV L+ +L+ PF+
Sbjct: 232 DVWSTGVILYILLSGCPPFN 251
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + K T Q A+K + K Q ++ +++LRE+++L L+HP ++ L+ F+D+
Sbjct: 64 GEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG 123
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++V ++ GG+L I +F V + + + Y+ I+HRD+KP
Sbjct: 124 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS-----GITYMHKNKIVHRDLKP 178
Query: 132 DNILLD---EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LL+ ++ + I DF ++T E ++ GT YIAPE+ DE
Sbjct: 179 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE------KC 232
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WS GV L+ +L+ PF+
Sbjct: 233 DVWSTGVILYILLSGCPPFN 252
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + K T Q A+K + K Q ++ +++LRE+++L L+HP ++ L+ F+D+
Sbjct: 40 GEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG 99
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++V ++ GG+L I +F V + + + Y+ I+HRD+KP
Sbjct: 100 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS-----GITYMHKNKIVHRDLKP 154
Query: 132 DNILLD---EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LL+ ++ + I DF ++T E ++ GT YIAPE+ DE
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDE------KC 208
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WS GV L+ +L+ PF+
Sbjct: 209 DVWSTGVILYILLSGCPPFN 228
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 117/241 (48%), Gaps = 18/241 (7%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G KF V + +++ +K + A+K + K+Q + + RE+EI + L HP ++ L
Sbjct: 21 GKGKF---GNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ F D ++++ + G + + + +F T Y EL AL Y +K
Sbjct: 78 YGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTAT-----YITELANALSYCHSKR 132
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+IHRDIKP+N+LL G I DF +V + ++ GT Y+ PE+ E
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGW-SVHAPSSRRDTLCGTLDYLPPEMI-----EGRM 186
Query: 184 YSYSVDWWSLGVTLFEILARGRPFDIHS-NTSVKDVKAIIYSPVHYPTAWSESTKHLLSQ 242
+ VD WSLGV +E L PF+ H+ + + + + ++ +P +E + L+S+
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFT---FPDFVTEGARDLISR 243
Query: 243 V 243
+
Sbjct: 244 L 244
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 14/200 (7%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + K T Q A+K + K Q ++ +++LRE+++L L+HP + L+ F+D+
Sbjct: 40 GEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKG 99
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++V ++ GG+L I +F V + + + Y I+HRD+KP
Sbjct: 100 YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS-----GITYXHKNKIVHRDLKP 154
Query: 132 DNILLD---EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LL+ ++ + I DF ++T E ++ GT YIAPE+ DE
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDE------KC 208
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WS GV L+ +L+ PF+
Sbjct: 209 DVWSTGVILYILLSGCPPFN 228
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Query: 46 LREMEILTTLE-HPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L+E++IL + HP ++ L ++ F+V DL+ G+L ++T+ + TR
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK-- 128
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSG 164
I E+ AL L +I+HRD+KP+NILLD++ + +TDF + L+ + S+ G
Sbjct: 129 IMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCG 185
Query: 165 TKPYIAPEIFLVA-TDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
T Y+APEI + D GY VD WS GV ++ +LA PF
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV + T Q A+K ++K + D + RE+ L L HP ++ L+ + ++
Sbjct: 27 GKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD 86
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ MV + G +L +I Q K R + ++ A++Y I+HRD+KP
Sbjct: 87 EIIMVIEYA-GNELFDYIVQRDKMSEQEARR-----FFQQIISAVEYCHRHKIVHRDLKP 140
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIF---LVATDEVLGYSYSV 188
+N+LLDE + I DF ++ ++ + + G+ Y APE+ L A E V
Sbjct: 141 ENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE-------V 193
Query: 189 DWWSLGVTLFEILARGRPFDIHS 211
D WS GV L+ +L R PFD S
Sbjct: 194 DVWSCGVILYVMLCRRLPFDDES 216
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 120/239 (50%), Gaps = 19/239 (7%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
K +V+ + + Y +K ++ S+ ++ + RE+ +L ++HP +V F++
Sbjct: 38 GKAILVKSTEDGRQYVIKEINISRMSSKER-EESRREVAVLANMKHPNIVQYRESFEENG 96
Query: 72 DLFMVSDLLLGGDL--RYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
L++V D GGDL R + + + F + D I + ++ LAL ++ + I+HRDI
Sbjct: 97 SLYIVMDYCEGGDLFKRINAQKGVLF-----QEDQILDWFVQICLALKHVHDRKILHRDI 151
Query: 130 KPDNILLDEEGHAHITDFNIATVLEEN-QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
K NI L ++G + DF IA VL +LA + GT Y++PEI E Y+
Sbjct: 152 KSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEIC-----ENKPYNNKS 206
Query: 189 DWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTA--WSESTKHLLSQVHR 245
D W+LG L+E+ F+ S+K++ I S P + +S + L+SQ+ +
Sbjct: 207 DIWALGCVLYELCTLKHAFEA---GSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFK 262
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV + T Q A+K ++K + D + RE+ L L HP ++ L+ + ++
Sbjct: 28 GKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD 87
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ MV + G +L +I Q K R + ++ A++Y I+HRD+KP
Sbjct: 88 EIIMVIEYA-GNELFDYIVQRDKMSEQEARR-----FFQQIISAVEYCHRHKIVHRDLKP 141
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIF---LVATDEVLGYSYSV 188
+N+LLDE + I DF ++ ++ + + G+ Y APE+ L A E V
Sbjct: 142 ENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE-------V 194
Query: 189 DWWSLGVTLFEILARGRPFDIHS 211
D WS GV L+ +L R PFD S
Sbjct: 195 DVWSCGVILYVMLCRRLPFDDES 217
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 7/164 (4%)
Query: 46 LREMEILTTLE-HPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L+E++IL + HP ++ L ++ F+V DL+ G+L ++T+ + TR
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK-- 115
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSG 164
I E+ AL L +I+HRD+KP+NILLD++ + +TDF + L+ + + G
Sbjct: 116 IMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG 172
Query: 165 TKPYIAPEIFLVA-TDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
T Y+APEI + D GY VD WS GV ++ +LA PF
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV + T Q A+K ++K + D + RE+ L L HP ++ L+ + ++
Sbjct: 18 GKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD 77
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ MV + G +L +I Q K R + ++ A++Y I+HRD+KP
Sbjct: 78 EIIMVIEYA-GNELFDYIVQRDKMSEQEARR-----FFQQIISAVEYCHRHKIVHRDLKP 131
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIF---LVATDEVLGYSYSV 188
+N+LLDE + I DF ++ ++ + + G+ Y APE+ L A E V
Sbjct: 132 ENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE-------V 184
Query: 189 DWWSLGVTLFEILARGRPFDIHS 211
D WS GV L+ +L R PFD S
Sbjct: 185 DVWSCGVILYVMLCRRLPFDDES 207
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 16/203 (7%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV + T Q A+K ++K + D + RE+ L L HP ++ L+ + ++
Sbjct: 22 GKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD 81
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ MV + G +L +I Q K R + ++ A++Y I+HRD+KP
Sbjct: 82 EIIMVIEYA-GNELFDYIVQRDKMSEQEARR-----FFQQIISAVEYCHRHKIVHRDLKP 135
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYS---V 188
+N+LLDE + I DF ++ ++ + + G+ Y APE+ + G Y+ V
Sbjct: 136 ENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV-------ISGKLYAGPEV 188
Query: 189 DWWSLGVTLFEILARGRPFDIHS 211
D WS GV L+ +L R PFD S
Sbjct: 189 DVWSCGVILYVMLCRRLPFDDES 211
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 7/164 (4%)
Query: 46 LREMEILTTLE-HPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L+E++IL + HP ++ L ++ F+V DL+ G+L ++T+ + TR
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK-- 128
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSG 164
I E+ AL L +I+HRD+KP+NILLD++ + +TDF + L+ + + G
Sbjct: 129 IMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCG 185
Query: 165 TKPYIAPEIFLVA-TDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
T Y+APEI + D GY VD WS GV ++ +LA PF
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREME----ILTTLEHPFLVNLWFCF 67
S+V + + K T+++ A+K CI ++AL+ ME +L ++HP +V L +
Sbjct: 32 SEVILAEDKRTQKLVAIK------CIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 68 QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHR 127
+ L+++ L+ GG+L I + FY T D L F++ A+ YL I+HR
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEK-GFY---TERDASRLI-FQVLDAVKYLHDLGIVHR 140
Query: 128 DIKPDNIL---LDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGY 184
D+KP+N+L LDE+ I+DF ++ + + + ++ GT Y+APE+ Y
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP-----Y 195
Query: 185 SYSVDWWSLGVTLFEILARGRPF 207
S +VD WS+GV + +L PF
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREME----ILTTLEHPFLVNLWFCF 67
S+V + + K T+++ A+K CI ++AL+ ME +L ++HP +V L +
Sbjct: 32 SEVILAEDKRTQKLVAIK------CIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 68 QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHR 127
+ L+++ L+ GG+L I + FY T D L F++ A+ YL I+HR
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEK-GFY---TERDASRLI-FQVLDAVKYLHDLGIVHR 140
Query: 128 DIKPDNIL---LDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGY 184
D+KP+N+L LDE+ I+DF ++ + + + ++ GT Y+APE+ Y
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP-----Y 195
Query: 185 SYSVDWWSLGVTLFEILARGRPF 207
S +VD WS+GV + +L PF
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 23/203 (11%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREME----ILTTLEHPFLVNLWFCF 67
S+V + + K T+++ A+K CI ++AL+ ME +L ++HP +V L +
Sbjct: 32 SEVILAEDKRTQKLVAIK------CIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 68 QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHR 127
+ L+++ L+ GG+L I + FY T D L F++ A+ YL I+HR
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEK-GFY---TERDASRLI-FQVLDAVKYLHDLGIVHR 140
Query: 128 DIKPDNIL---LDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGY 184
D+KP+N+L LDE+ I+DF ++ + + + ++ GT Y+APE+ Y
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP-----Y 195
Query: 185 SYSVDWWSLGVTLFEILARGRPF 207
S +VD WS+GV + +L PF
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV + K+T + A K + + L++ + E+EIL T +HP++V L + +
Sbjct: 25 GKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPYIVKLLGAYYHDG 81
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+++ + GG + + + G I + ++ AL++L +K IIHRD+K
Sbjct: 82 KLWIMIEFCPGGAVDAIMLE----LDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 137
Query: 132 DNILLDEEGHAHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
N+L+ EG + DF + A L+ Q S GT ++APE+ + T + Y Y D
Sbjct: 138 GNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADI 197
Query: 191 WSLGVTLFEI 200
WSLG+TL E+
Sbjct: 198 WSLGITLIEM 207
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV + K+T + A K + + L++ + E+EIL T +HP++V L + +
Sbjct: 33 GKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPYIVKLLGAYYHDG 89
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+++ + GG + + + G I + ++ AL++L +K IIHRD+K
Sbjct: 90 KLWIMIEFCPGGAVDAIMLE----LDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 145
Query: 132 DNILLDEEGHAHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
N+L+ EG + DF + A L+ Q S GT ++APE+ + T + Y Y D
Sbjct: 146 GNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADI 205
Query: 191 WSLGVTLFEI 200
WSLG+TL E+
Sbjct: 206 WSLGITLIEM 215
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 23/203 (11%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREME----ILTTLEHPFLVNLWFCF 67
S+V + + K T+++ A+K CI + AL+ ME +L ++HP +V L +
Sbjct: 32 SEVILAEDKRTQKLVAIK------CIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 68 QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHR 127
+ L+++ L+ GG+L I + FY T D L F++ A+ YL I+HR
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEK-GFY---TERDASRLI-FQVLDAVKYLHDLGIVHR 140
Query: 128 DIKPDNIL---LDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGY 184
D+KP+N+L LDE+ I+DF ++ + + + ++ GT Y+APE+ Y
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP-----Y 195
Query: 185 SYSVDWWSLGVTLFEILARGRPF 207
S +VD WS+GV + +L PF
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 108/207 (52%), Gaps = 20/207 (9%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS F S+V +V+++ T +++A+K + KS +L+N E+ +L ++H +V L
Sbjct: 18 GSGAF---SEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN---EIAVLKKIKHENIVTL 71
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
++ ++V L+ GG+L I + V T D L ++ A+ YL
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILER----GVYTEKDA-SLVIQQVLSAVKYLHENG 126
Query: 124 IIHRDIKPDNILL---DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDE 180
I+HRD+KP+N+L +E ITDF ++ +E+N + ++ GT Y+APE+
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPGYVAPEVLAQKP-- 183
Query: 181 VLGYSYSVDWWSLGVTLFEILARGRPF 207
YS +VD WS+GV + +L PF
Sbjct: 184 ---YSKAVDCWSIGVITYILLCGYPPF 207
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+KV + + T + A+K + K+Q + +L+ + RE+ I+ L HP +V L+ + E+
Sbjct: 29 AKVKLARHVLTGREVAVKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK 87
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L++V + GG++ ++ + R + + A+ Y K+I+HRD+K
Sbjct: 88 TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKYIVHRDLKA 142
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY---SV 188
+N+LLD + + I DF + + G+ PY APE+F G Y V
Sbjct: 143 ENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELF-------QGKKYDGPEV 195
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WSLGV L+ +++ PFD
Sbjct: 196 DVWSLGVILYTLVSGSLPFD 215
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+KV + + T + A+K + K+Q + +L+ + RE+ I+ L HP +V L+ + E+
Sbjct: 28 AKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 86
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L++V + GG++ ++ + R + + A+ Y K I+HRD+K
Sbjct: 87 TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKFIVHRDLKA 141
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY---SV 188
+N+LLD + + I DF + + G+ PY APE+F G Y V
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF-------QGKKYDGPEV 194
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WSLGV L+ +++ PFD
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 113/234 (48%), Gaps = 18/234 (7%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+KV + + T + A+K + K+Q + +L+ + RE+ I+ L HP +V L+ + E+
Sbjct: 26 AKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK 84
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+++ + GG++ ++ + R+ + + A+ Y K I+HRD+K
Sbjct: 85 TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-----AVQYCHQKRIVHRDLKA 139
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY---SV 188
+N+LLD + + I DF + + G+ PY APE+F G Y V
Sbjct: 140 ENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELF-------QGKKYDGPEV 192
Query: 189 DWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQ 242
D WSLGV L+ +++ PFD + +++ ++ P S ++LL +
Sbjct: 193 DVWSLGVILYTLVSGSLPFDGQNLKELRE--RVLRGKYRIPFYMSTDCENLLKR 244
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 28/210 (13%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVN 62
GS C K C+ K T YA+K + KS+ ++ E+EIL +HP ++
Sbjct: 38 GSYSEC---KRCV--HKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHPNIIT 85
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L + D + +++V++L+ GG+L I + KF+S + +H +G ++YL ++
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKILRQ-KFFSEREASFVLH----TIGKTVEYLHSQ 140
Query: 123 HIIHRDIKPDNIL-LDEEGHA---HITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVA 177
++HRD+KP NIL +DE G+ I DF A L EN L + T ++APE+
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL--- 197
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
+ GY D WSLG+ L+ +LA PF
Sbjct: 198 --KRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 28/210 (13%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVN 62
GS C K C+ K T YA+K + KS+ ++ E+EIL +HP ++
Sbjct: 38 GSYSEC---KRCV--HKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHPNIIT 85
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L + D + +++V++L+ GG+L I + KF+S + +H +G ++YL ++
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKILRQ-KFFSEREASFVLHT----IGKTVEYLHSQ 140
Query: 123 HIIHRDIKPDNIL-LDEEGHA---HITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVA 177
++HRD+KP NIL +DE G+ I DF A L EN L + T ++APE+
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL--- 197
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
+ GY D WSLG+ L+ +LA PF
Sbjct: 198 --KRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+KV + + T + A+K + K+Q + +L+ + RE+ I+ L HP +V L+ + E+
Sbjct: 28 AKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 86
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L++V + GG++ ++ + R + + A+ Y K I+HRD+K
Sbjct: 87 TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKFIVHRDLKA 141
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY---SV 188
+N+LLD + + I DF + + G+ PY APE+F G Y V
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF-------QGKKYDGPEV 194
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WSLGV L+ +++ PFD
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 112/234 (47%), Gaps = 18/234 (7%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+KV + + T + A+K + K+Q + +L+ + RE+ I+ L HP +V L+ + E+
Sbjct: 29 AKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK 87
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L+++ + GG++ ++ + R+ + + A+ Y K I+HRD+K
Sbjct: 88 TLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS-----AVQYCHQKRIVHRDLKA 142
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY---SV 188
+N+LLD + + I DF + + G PY APE+F G Y V
Sbjct: 143 ENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELF-------QGKKYDGPEV 195
Query: 189 DWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQ 242
D WSLGV L+ +++ PFD + +++ ++ P S ++LL +
Sbjct: 196 DVWSLGVILYTLVSGSLPFDGQNLKELRE--RVLRGKYRIPFYMSTDCENLLKR 247
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+KV + + T + A+K + K+Q + +L+ + RE+ I+ L HP +V L+ + E+
Sbjct: 28 AKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 86
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L++V + GG++ ++ + R + + A+ Y K I+HRD+K
Sbjct: 87 TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKFIVHRDLKA 141
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY---SV 188
+N+LLD + + I DF + + G PY APE+F G Y V
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF-------QGKKYDGPEV 194
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WSLGV L+ +++ PFD
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 27/245 (11%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + K T A+K + K+ + + +L E+ +L L+HP ++ L+ F+D+
Sbjct: 51 GEVLLCRDKVTHVERAIKIIRKT-SVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR 109
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+ ++V + GG+L I +KF V + + + YL +I+HRD+KP
Sbjct: 110 NYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLS-----GVTYLHKHNIVHRDLKP 164
Query: 132 DNILL---DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LL +++ I DF ++ V E + GT YIAPE+ DE
Sbjct: 165 ENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDE------KC 218
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT----SVKDVKAIIYSPVHYPTAW---SESTKHLLS 241
D WS+GV LF +LA PF ++ V+ K SP W SE K L+
Sbjct: 219 DVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSP-----EWKNVSEGAKDLIK 273
Query: 242 QVHRY 246
Q+ ++
Sbjct: 274 QMLQF 278
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 16/200 (8%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+KV + + T + A++ + K+Q + +L+ + RE+ I+ L HP +V L+ + E+
Sbjct: 28 AKVKLARHILTGKEVAVRIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 86
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L++V + GG++ ++ + R + + A+ Y K I+HRD+K
Sbjct: 87 TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKFIVHRDLKA 141
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY---SV 188
+N+LLD + + I DF + + G+ PY APE+F G Y V
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF-------QGKKYDGPEV 194
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WSLGV L+ +++ PFD
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+KV + + T + A+K + K+Q + +L+ + RE+ I L HP +V L+ + E+
Sbjct: 28 AKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEK 86
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L++V + GG++ ++ + R + + A+ Y K I+HRD+K
Sbjct: 87 TLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS-----AVQYCHQKFIVHRDLKA 141
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY---SV 188
+N+LLD + + I DF + + G PY APE+F G Y V
Sbjct: 142 ENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF-------QGKKYDGPEV 194
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WSLGV L+ +++ PFD
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 118/224 (52%), Gaps = 28/224 (12%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS F V +V+++ + +K ++K + + ++ + E+E+L +L+HP ++ +
Sbjct: 31 GSGAF---GDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI-HLYAFELGL----ALDY 118
+ F+D ++++V + GG+L I S R + Y EL AL Y
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIV------SAQARGKALSEGYVAELMKQMMNALAY 139
Query: 119 LKTKHIIHRDIKPDNILL-DEEGHA--HITDFNIATVLEENQLATSMSGTKPYIAPEIFL 175
++H++H+D+KP+NIL D H+ I DF +A + + ++ +T+ +GT Y+APE+F
Sbjct: 140 FHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVF- 198
Query: 176 VATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVK 219
++ D WS GV ++ +L PF + TS+++V+
Sbjct: 199 -----KRDVTFKCDIWSAGVVMYFLLTGCLPF---TGTSLEEVQ 234
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 23/203 (11%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALK----NVLREMEILTTLEHPFLVNLWFCF 67
S+V + ++K T +++A+K CI + ALK ++ E+ +L ++H +V L +
Sbjct: 36 SEVVLAEEKATGKLFAVK------CIPKKALKGKESSIENEIAVLRKIKHENIVALEDIY 89
Query: 68 QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHR 127
+ L++V L+ GG+L I + FY T D L L A+ YL I+HR
Sbjct: 90 ESPNHLYLVMQLVSGGELFDRIVEK-GFY---TEKDASTLIRQVLD-AVYYLHRMGIVHR 144
Query: 128 DIKPDNILL---DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGY 184
D+KP+N+L DEE I+DF ++ + + + ++ GT Y+APE+ Y
Sbjct: 145 DLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKP-----Y 199
Query: 185 SYSVDWWSLGVTLFEILARGRPF 207
S +VD WS+GV + +L PF
Sbjct: 200 SKAVDCWSIGVIAYILLCGYPPF 222
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+KV + + T + A++ + K+Q + +L+ + RE+ I+ L HP +V L+ + E+
Sbjct: 28 AKVKLARHILTGKEVAVRIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 86
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L++V + GG++ ++ + R + + A+ Y K I+HRD+K
Sbjct: 87 TLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS-----AVQYCHQKFIVHRDLKA 141
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY---SV 188
+N+LLD + + I DF + G+ PY APE+F G Y V
Sbjct: 142 ENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELF-------QGKKYDGPEV 194
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WSLGV L+ +++ PFD
Sbjct: 195 DVWSLGVILYTLVSGSLPFD 214
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 116/227 (51%), Gaps = 28/227 (12%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVN 62
GS C K CI K T +A+K + KS+ ++ E+EIL +HP ++
Sbjct: 33 GSYSVC---KRCI--HKATNMEFAVKIIDKSK-------RDPTEEIEILLRYGQHPNIIT 80
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L + D + +++V++L+ GG+L I + KF+S R + L F + ++YL +
Sbjct: 81 LKDVYDDGKYVYVVTELMKGGELLDKILRQ-KFFS--EREASAVL--FTITKTVEYLHAQ 135
Query: 123 HIIHRDIKPDNIL-LDEEGHA---HITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVA 177
++HRD+KP NIL +DE G+ I DF A L EN L + T ++APE+
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL--- 192
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYS 224
E GY + D WSLGV L+ +L PF + + +++ A I S
Sbjct: 193 --ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS 237
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 118/240 (49%), Gaps = 18/240 (7%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLR-EMEILTTLEHPFLVN 62
G KF V + ++K + + A+K + KSQ IE++ +++ LR E+EI L HP ++
Sbjct: 32 GKGKF---GNVYLAREKKSHFIVALKVLFKSQ-IEKEGVEHQLRREIEIQAHLHHPNILR 87
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L+ F D ++++ + G+L + + F R TI EL AL Y K
Sbjct: 88 LYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDE--QRTATI---MEELADALMYCHGK 142
Query: 123 HIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
+IHRDIKP+N+LL +G I DF +V + +M GT Y+ PE+ E
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGW-SVHAPSLRRKTMCGTLDYLPPEMI-----EGR 196
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD--IHSNTSVKDVKAIIYSPVHYPTAWSESTKHLL 240
++ VD W +GV +E+L PF+ H+ T + VK + P PT + LL
Sbjct: 197 MHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLL 256
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 18/234 (7%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+KV + + T + A+K + K+Q + +L+ + RE+ I+ L HP +V L+ + E+
Sbjct: 21 AKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 79
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L++V + GG++ ++ R + + A+ Y K I+HRD+K
Sbjct: 80 TLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVS-----AVQYCHQKFIVHRDLKA 134
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY---SV 188
+N+LLD + + I DF + + G+ PY APE+F G Y V
Sbjct: 135 ENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELF-------QGKKYDGPEV 187
Query: 189 DWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQ 242
D WSLGV L+ +++ PFD + +++ ++ P S ++LL +
Sbjct: 188 DVWSLGVILYTLVSGSLPFDGQNLKELRE--RVLRGKYRIPFYMSTDCENLLKK 239
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 10/197 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV + T+Q A+K++ + + D V RE+ L L HP ++ L+
Sbjct: 23 GKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT 82
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
D+ MV + GG+L +I + + D + ++ A++Y I+HRD+KP
Sbjct: 83 DIVMVIEYA-GGELFDYIVEKKRMTE-----DEGRRFFQQIICAIEYCHRHKIVHRDLKP 136
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
+N+LLD+ + I DF ++ ++ + + G+ Y APE+ + L VD W
Sbjct: 137 ENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI----NGKLYAGPEVDVW 192
Query: 192 SLGVTLFEILARGRPFD 208
S G+ L+ +L PFD
Sbjct: 193 SCGIVLYVMLVGRLPFD 209
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVN 62
GS C K CI K T +A+K + KS+ ++ E+EIL +HP ++
Sbjct: 33 GSYSVC---KRCI--HKATNXEFAVKIIDKSK-------RDPTEEIEILLRYGQHPNIIT 80
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L + D + +++V++L GG+L I + KF+S R + L F + ++YL +
Sbjct: 81 LKDVYDDGKYVYVVTELXKGGELLDKILRQ-KFFS--EREASAVL--FTITKTVEYLHAQ 135
Query: 123 HIIHRDIKPDNIL-LDEEGHA---HITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVA 177
++HRD+KP NIL +DE G+ I DF A L EN L + T ++APE+
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVL--- 192
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYS 224
E GY + D WSLGV L+ L PF + + +++ A I S
Sbjct: 193 --ERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGS 237
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
TS V ++K T++ YA+K + K+ +++ K V E+ +L L HP ++ L F+
Sbjct: 65 ATSIVYRCKQKGTQKPYALKVLKKT--VDK---KIVRTEIGVLLRLSHPNIIKLKEIFET 119
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
++ +V +L+ GG+L I + +YS D + ++ A+ YL I+HRD+
Sbjct: 120 PTEISLVLELVTGGELFDRIVEK-GYYSERDAADAVK----QILEAVAYLHENGIVHRDL 174
Query: 130 KPDNILL---DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY 186
KP+N+L + I DF ++ ++E L ++ GT Y APEI Y
Sbjct: 175 KPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEIL-----RGCAYGP 229
Query: 187 SVDWWSLGVTLFEILARGRPF 207
VD WS+G+ + +L PF
Sbjct: 230 EVDMWSVGIITYILLCGFEPF 250
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 20/200 (10%)
Query: 26 YAMKYMHKSQCIERDALKNVLREMEILTTLE-HPFLVNLWFCFQDEEDLFMVSDLLLGGD 84
YA+K + K R V RE+E L + + ++ L F+D+ ++V + L GG
Sbjct: 41 YAVKIIEKQAGHSRS---RVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGS 97
Query: 85 LRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE---GH 141
+ HI Q K ++ + + ++ ALD+L TK I HRD+KP+NIL +
Sbjct: 98 ILAHI-QKQKHFNEREASRVVR----DVAAALDFLHTKGIAHRDLKPENILCESPEKVSP 152
Query: 142 AHITDFNIATVLEENQLATSMS--------GTKPYIAPEIFLVATDEVLGYSYSVDWWSL 193
I DF++ + ++ N T ++ G+ Y+APE+ V TD+ Y D WSL
Sbjct: 153 VKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSL 212
Query: 194 GVTLFEILARGRPFDIHSNT 213
GV L+ +L+ PF H
Sbjct: 213 GVVLYIMLSGYPPFVGHCGA 232
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 28/202 (13%)
Query: 20 KDTKQMYAMKYMHKSQCIERDALKNVLR---EMEILTTLEHPFLVNLWFCFQDEEDLFMV 76
+DT + A+K QC + + KN R E++I+ L HP +V+ D
Sbjct: 37 QDTGEQVAIK-----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE-VPDGLQKLAP 90
Query: 77 SDLLL-------GGDLRYHITQDIKFYSV-GTRNDTIHLYAFELGLALDYLKTKHIIHRD 128
+DL L GGDLR ++ Q F + G + I ++ AL YL IIHRD
Sbjct: 91 NDLPLLAMEYCEGGDLRKYLNQ---FENCCGLKEGPIRTLLSDISSALRYLHENRIIHRD 147
Query: 129 IKPDNILLDEEGHA---HITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYS 185
+KP+NI+L I D A L++ +L T GT Y+APE+ E Y+
Sbjct: 148 LKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL-----EQKKYT 202
Query: 186 YSVDWWSLGVTLFEILARGRPF 207
+VD+WS G FE + RPF
Sbjct: 203 VTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 28/202 (13%)
Query: 20 KDTKQMYAMKYMHKSQCIERDALKNVLR---EMEILTTLEHPFLVNLWFCFQDEEDLFMV 76
+DT + A+K QC + + KN R E++I+ L HP +V+ D
Sbjct: 36 QDTGEQVAIK-----QCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE-VPDGLQKLAP 89
Query: 77 SDLLL-------GGDLRYHITQDIKFYSV-GTRNDTIHLYAFELGLALDYLKTKHIIHRD 128
+DL L GGDLR ++ Q F + G + I ++ AL YL IIHRD
Sbjct: 90 NDLPLLAMEYCEGGDLRKYLNQ---FENCCGLKEGPIRTLLSDISSALRYLHENRIIHRD 146
Query: 129 IKPDNILLDEEGHA---HITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYS 185
+KP+NI+L I D A L++ +L T GT Y+APE+ E Y+
Sbjct: 147 LKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL-----EQKKYT 201
Query: 186 YSVDWWSLGVTLFEILARGRPF 207
+VD+WS G FE + RPF
Sbjct: 202 VTVDYWSFGTLAFECITGFRPF 223
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 18/226 (7%)
Query: 20 KDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL 79
K+T Q+ A+K + +E D L+ +++E+ I+ + P +V + + DL++V +
Sbjct: 51 KETGQIVAIKQVP----VESD-LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105
Query: 80 LLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE 139
G ++ I+ + D I L+YL IHRDIK NILL+ E
Sbjct: 106 CGAGS----VSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTE 161
Query: 140 GHAHITDFNIATVLEENQLATS-MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLF 198
GHA + DF +A L + + + GT ++APE+ + +GY+ D WSLG+T
Sbjct: 162 GHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVI-----QEIGYNCVADIWSLGITAI 216
Query: 199 EILARGRP--FDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQ 242
E +A G+P DIH ++ + P WS++ + Q
Sbjct: 217 E-MAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQ 261
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKMLNHENVVKFYGHRREGN 77
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE--LLKRREF--HAEPV 188
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKMLNHENVVKFYGHRREGN 77
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAEPV 188
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKMLNHENVVKFYGHRREGN 78
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 79 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE--LLKRREF--HAEPV 189
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 14/207 (6%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 18 AAGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
++ + GG+L I DI G + +L + YL I HRDI
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 130 KPDNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSY 186
KP+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAE 186
Query: 187 SVDWWSLGVTLFEILARGRPFDIHSNT 213
VD WS G+ L +LA P+D S++
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 78
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 79 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAEPV 189
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 78
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 79 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAEPV 189
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 78
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 79 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAEPV 189
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 77
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAEPV 188
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 78
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 79 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAEPV 189
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINAMLNHENVVKFYGHRREGN 78
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 79 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAEPV 189
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 114/247 (46%), Gaps = 22/247 (8%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQCIERDAL--KNVLREMEILTTLEHPFLVNLW 64
G +V++ ++T Q +A+K + ++ L +++ RE I L+HP +V L
Sbjct: 33 GKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELL 92
Query: 65 FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHI 124
+ + L+MV + + G DL + I + V + H Y ++ AL Y +I
Sbjct: 93 ETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH-YMRQILEALRYCHDNNI 151
Query: 125 IHRDIKPDNILL---DEEGHAHITDFNIATVLEENQL-ATSMSGTKPYIAPEIFLVATDE 180
IHRD+KP+N+LL + + DF +A L E+ L A GT ++APE+
Sbjct: 152 IHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREP-- 209
Query: 181 VLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHY-PTAW---SEST 236
Y VD W GV LF +L+ PF T + + II P W SES
Sbjct: 210 ---YGKPVDVWGCGVILFILLSGCLPF---YGTKERLFEGIIKGKYKMNPRQWSHISESA 263
Query: 237 KHLLSQV 243
K L+ ++
Sbjct: 264 KDLVRRM 270
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 77
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAEPV 188
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 77
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE--LLKRREF--HAEPV 188
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 19 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 76
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 77 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 131
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 132 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAEPV 187
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 188 DVWSCGIVLTAMLAGELPWDQPSDS 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 77
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAEPV 188
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 77
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAEPV 188
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +K + DTK+++A K + KS ++ + + E+ I +L H +V F+D
Sbjct: 29 GFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED 88
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
+ +F+V +L R ++ Y ++ L YL +IHRD+
Sbjct: 89 NDFVFVVLELC-----RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 130 KPDNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
K N+ L+E+ I DF +AT +E + + ++ GT YIAPE+ G+S+ V
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-----SKKGHSFEV 198
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WS+G ++ +L PF+
Sbjct: 199 DVWSIGCIMYTLLVGKPPFE 218
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 78
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 79 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAEPV 189
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +K + DTK+++A K + KS ++ + + E+ I +L H +V F+D
Sbjct: 33 GFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED 92
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
+ +F+V +L R ++ Y ++ L YL +IHRD+
Sbjct: 93 NDFVFVVLELC-----RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 130 KPDNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
K N+ L+E+ I DF +AT +E + + ++ GT YIAPE+ G+S+ V
Sbjct: 148 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-----SKKGHSFEV 202
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WS+G ++ +L PF+
Sbjct: 203 DVWSIGCIMYTLLVGKPPFE 222
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 77
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE--LLKRREF--HAEPV 188
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 21 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 78
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 79 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 134 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAEPV 189
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDS 214
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 77
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAEPV 188
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +K + DTK+++A K + KS ++ + + E+ I +L H +V F+D
Sbjct: 29 GFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED 88
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
+ +F+V +L R ++ Y ++ L YL +IHRD+
Sbjct: 89 NDFVFVVLELC-----RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 130 KPDNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
K N+ L+E+ I DF +AT +E + + ++ GT YIAPE+ G+S+ V
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-----SKKGHSFEV 198
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WS+G ++ +L PF+
Sbjct: 199 DVWSIGCIMYTLLVGKPPFE 218
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 77
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE--LLKRREF--HAEPV 188
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + T++ A+K + + + D +N+ +E+ I L H +V + ++
Sbjct: 20 GEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGN 77
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
++ + GG+L I DI G + +L + YL I HRDIKP
Sbjct: 78 IQYLFLEYCSGGELFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 132 DNILLDEEGHAHITDFNIATVLEEN---QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LLDE + I+DF +ATV N +L M GT PY+APE L+ E ++ V
Sbjct: 133 ENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE--LLKRREF--HAEPV 188
Query: 189 DWWSLGVTLFEILARGRPFDIHSNT 213
D WS G+ L +LA P+D S++
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDS 213
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 95/176 (53%), Gaps = 12/176 (6%)
Query: 36 CIE-RDALKNVLREMEILTTLEHPFLVNLWFCFQD--EEDLFMVSDLLLGGDLRYHITQD 92
CI+ R ++ V +E+ IL L+HP +V L D E+ L+MV +L+ G + T
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-- 130
Query: 93 IKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATV 152
+K S D Y +L ++YL + IIHRDIKP N+L+ E+GH I DF ++
Sbjct: 131 LKPLS----EDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 153 LE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
+ + L ++ GT ++APE L T ++ ++D W++GVTL+ + PF
Sbjct: 187 FKGSDALLSNTVGTPAFMAPE-SLSETRKIFS-GKALDVWAMGVTLYCFVFGQCPF 240
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 23/217 (10%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERDALKN-VLREMEILTTLEHPFLVNLWFCFQDEED 72
V VQ + + + A K +H + A++N ++RE+++L P++V + F + +
Sbjct: 32 VTKVQHRPSGLIMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE 88
Query: 73 LFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH-IIHRDIKP 131
+ + + + GG L + + + + + + + L YL+ KH I+HRD+KP
Sbjct: 89 ISICMEHMDGGSLDQVLKEAKRIPE-----EILGKVSIAVLRGLAYLREKHQIMHRDVKP 143
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV--D 189
NIL++ G + DF ++ L ++ +A S GT+ Y+APE + G YSV D
Sbjct: 144 SNILVNSRGEIKLCDFGVSGQLIDS-MANSFVGTRSYMAPE-------RLQGTHYSVQSD 195
Query: 190 WWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPV 226
WS+G++L E LA GR + I K+++AI PV
Sbjct: 196 IWSMGLSLVE-LAVGR-YPI-PPPDAKELEAIFGRPV 229
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +K + DTK+++A K + KS ++ + + E+ I +L H +V F+D
Sbjct: 27 GFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED 86
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
+ +F+V +L R ++ Y ++ L YL +IHRD+
Sbjct: 87 NDFVFVVLELC-----RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 130 KPDNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
K N+ L+E+ I DF +AT +E + + + GT YIAPE+ G+S+ V
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-----SKKGHSFEV 196
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WS+G ++ +L PF+
Sbjct: 197 DVWSIGCIMYTLLVGKPPFE 216
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 17/223 (7%)
Query: 24 QMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGG 83
+M K M+K+ ++R V E++I L+HP ++ L+ F+D +++V ++ G
Sbjct: 42 KMIDKKAMYKAGMVQR-----VQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNG 96
Query: 84 DLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAH 143
++ ++ +K +S N+ H + ++ + YL + I+HRD+ N+LL +
Sbjct: 97 EMNRYLKNRVKPFS---ENEARH-FMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIK 152
Query: 144 ITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILA 202
I DF +AT L+ ++ ++ GT YI+PEI AT G D WSLG + +L
Sbjct: 153 IADFGLATQLKMPHEKHYTLCGTPNYISPEI---ATRSAHG--LESDVWSLGCMFYTLLI 207
Query: 203 RGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQVHR 245
PFD ++T + ++ + P+ S K L+ Q+ R
Sbjct: 208 GRPPFD--TDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLLR 248
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +K + DTK+++A K + KS ++ + + E+ I +L H +V F+D
Sbjct: 53 GFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED 112
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
+ +F+V +L R ++ Y ++ L YL +IHRD+
Sbjct: 113 NDFVFVVLELC-----RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 130 KPDNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
K N+ L+E+ I DF +AT +E + + + GT YIAPE+ G+S+ V
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-----SKKGHSFEV 222
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WS+G ++ +L PF+
Sbjct: 223 DVWSIGCIMYTLLVGKPPFE 242
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 5 SSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEI-LTTLEHPFLVNL 63
S CG +V ++ + T + A+K M +S E + K +L ++++ L + + P++V
Sbjct: 34 GSGTCG--QVWKMRFRKTGHVIAVKQMRRSGNKEEN--KRILMDLDVVLKSHDCPYIVQC 89
Query: 64 WFCFQDEEDLFMVSDLL--LGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT 121
+ F D+F+ +L+ L+ + I +G T+ + AL YLK
Sbjct: 90 FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKM--TVAIVK-----ALYYLKE 142
Query: 122 KH-IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDE 180
KH +IHRD+KP NILLDE G + DF I+ L +++ +G Y+APE
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPT 202
Query: 181 VLGYSYSVDWWSLGVTLFEILARGRPF 207
Y D WSLG++L E+ P+
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQFPY 229
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 11/200 (5%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +K + DTK+++A K + KS ++ + + E+ I +L H +V F+D
Sbjct: 51 GFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED 110
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
+ +F+V +L R ++ Y ++ L YL +IHRD+
Sbjct: 111 NDFVFVVLELC-----RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 130 KPDNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
K N+ L+E+ I DF +AT +E + + + GT YIAPE+ G+S+ V
Sbjct: 166 KLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-----SKKGHSFEV 220
Query: 189 DWWSLGVTLFEILARGRPFD 208
D WS+G ++ +L PF+
Sbjct: 221 DVWSIGCIMYTLLVGKPPFE 240
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 13/185 (7%)
Query: 27 AMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR 86
A+K + ++ A + ++E+++L L HP ++ + F ++ +L +V +L GDL
Sbjct: 61 ALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL- 119
Query: 87 YHITQDIKFYSVGTR---NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAH 143
++ IK + R T+ Y +L AL+++ ++ ++HRDIKP N+ + G
Sbjct: 120 ---SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVK 176
Query: 144 ITDFNIATVLEENQLAT-SMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILA 202
+ D + A S+ GT Y++PE GY++ D WSLG L+E+ A
Sbjct: 177 LGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI-----HENGYNFKSDIWSLGCLLYEMAA 231
Query: 203 RGRPF 207
PF
Sbjct: 232 LQSPF 236
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 23/206 (11%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +K + DTK+++A K + KS ++ + + E+ I +L++P +V F+D
Sbjct: 54 GFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFED 113
Query: 70 EEDLFMVSDLLLGGDL------RYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
++ +++V ++ L R +T+ Y + TI + YL
Sbjct: 114 DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM---RQTIQ--------GVQYLHNNR 162
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVL 182
+IHRD+K N+ L+++ I DF +AT +E + + ++ GT YIAPE+
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKK----- 217
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD 208
G+S+ VD WSLG L+ +L PF+
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIE---RDALKNVLR-------EMEILTTLEHPFLV 61
+V + ++K+ A+K + KSQ + D KN+ + E+ +L +L+HP ++
Sbjct: 50 GEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNII 109
Query: 62 NLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT 121
L+ F+D++ ++V++ GG+L I KF N + + + YL
Sbjct: 110 KLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILS-----GICYLHK 164
Query: 122 KHIIHRDIKPDNILLDEEG---HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVAT 178
+I+HRDIKP+NILL+ + + I DF +++ ++ GT YIAPE+
Sbjct: 165 HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKK- 223
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
Y+ D WS GV ++ +L PF ++ +
Sbjct: 224 -----YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI 255
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 13/235 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV Q K+T + A K + + L++ + E++IL + +HP +V L F E
Sbjct: 51 GKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 107
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+++ + GG + + + I + + AL+YL IIHRD+K
Sbjct: 108 NLWILIEFCAGGAVDAVMLE----LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 132 DNILLDEEGHAHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
NIL +G + DF + A Q S GT ++APE+ + T + Y Y D
Sbjct: 164 GNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV 223
Query: 191 WSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSP---VHYPTAWSESTKHLLSQ 242
WSLG+TL E+ P H ++ + I S + P+ WS + K L +
Sbjct: 224 WSLGITLIEMAEIEPPH--HELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 19/207 (9%)
Query: 2 FCGSSKFCGTSKVCIVQKKDTKQMYAMKYM---HKSQCIERDAL-KNVLREMEILTTLEH 57
F G +F K + K+T Q+ A+K + H+S+ +D + + LRE+++L L H
Sbjct: 17 FLGEGQFATVYKA---RDKNTNQIVAIKKIKLGHRSEA--KDGINRTALREIKLLQELSH 71
Query: 58 PFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALD 117
P ++ L F + ++ +V D + + IK S+ I Y L+
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFM-----ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL-EENQLATSMSGTKPYIAPEIFLV 176
YL I+HRD+KP+N+LLDE G + DF +A N+ T+ Y APE+
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFG 186
Query: 177 ATDEVLGYSYSVDWWSLGVTLFEILAR 203
A Y VD W++G L E+L R
Sbjct: 187 AR----MYGVGVDMWAVGCILAELLLR 209
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +K + DTK+++A K + KS ++ + + E+ I +L++P +V F+D
Sbjct: 54 GFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFED 113
Query: 70 EEDLFMVSDLLLGGDL------RYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
++ +++V ++ L R +T+ Y + TI + YL
Sbjct: 114 DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM---RQTIQ--------GVQYLHNNR 162
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVL 182
+IHRD+K N+ L+++ I DF +AT +E + + + GT YIAPE+
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKK----- 217
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD 208
G+S+ VD WSLG L+ +L PF+
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + K T A+K + KS +L E+ +L L+HP ++ L+ F+D+
Sbjct: 35 GEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKR 94
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+ ++V ++ GG+L I KF V + + YL +I+HRD+KP
Sbjct: 95 NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS-----GTTYLHKHNIVHRDLKP 149
Query: 132 DNILLDEEGH---AHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LL+ + I DF ++ E GT YIAPE+ DE
Sbjct: 150 ENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDE------KC 203
Query: 189 DWWSLGVTLFEILARGRPFDIHSNTSV 215
D WS GV L+ +L PF ++ +
Sbjct: 204 DVWSCGVILYILLCGYPPFGGQTDQEI 230
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +K + DTK+++A K + KS ++ + + E+ I +L++P +V F+D
Sbjct: 54 GFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFED 113
Query: 70 EEDLFMVSDLLLGGDL------RYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
++ +++V ++ L R +T+ Y + TI + YL
Sbjct: 114 DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM---RQTIQ--------GVQYLHNNR 162
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVL 182
+IHRD+K N+ L+++ I DF +AT +E + + + GT YIAPE+
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKK----- 217
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD 208
G+S+ VD WSLG L+ +L PF+
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 23/206 (11%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +K + DTK+++A K + KS ++ + + E+ I +L++P +V F+D
Sbjct: 38 GFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFED 97
Query: 70 EEDLFMVSDLLLGGDL------RYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
++ +++V ++ L R +T+ Y + TI + YL
Sbjct: 98 DDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFM---RQTIQ--------GVQYLHNNR 146
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVL 182
+IHRD+K N+ L+++ I DF +AT +E + + + GT YIAPE+
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKK----- 201
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD 208
G+S+ VD WSLG L+ +L PF+
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 13/235 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV Q K+T + A K + + L++ + E++IL + +HP +V L F E
Sbjct: 51 GKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 107
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+++ + GG + + + I + + AL+YL IIHRD+K
Sbjct: 108 NLWILIEFCAGGAVDAVMLE----LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 132 DNILLDEEGHAHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
NIL +G + DF + A Q S GT ++APE+ + T + Y Y D
Sbjct: 164 GNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV 223
Query: 191 WSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSP---VHYPTAWSESTKHLLSQ 242
WSLG+TL E+ P H ++ + I S + P+ WS + K L +
Sbjct: 224 WSLGITLIEMAEIEPPH--HELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 106/236 (44%), Gaps = 14/236 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV Q K+T + A K + + L++ + E++IL + +HP +V L F E
Sbjct: 24 GKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+++ + GG + + + I + + AL+YL IIHRD+K
Sbjct: 81 NLWILIEFCAGGAVDAVMLE----LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 136
Query: 132 DNILLDEEGHAHITDFNIATVLEEN--QLATSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
NIL +G + DF ++ Q S GT ++APE+ + T + Y Y D
Sbjct: 137 GNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD 196
Query: 190 WWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSP---VHYPTAWSESTKHLLSQ 242
WSLG+TL E+ P H ++ + I S + P+ WS + K L +
Sbjct: 197 VWSLGITLIEMAEIEPPH--HELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 250
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 22/219 (10%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLL 81
++ A+K M S + +++++E+ L L HP + C+ E ++V + L
Sbjct: 39 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 98
Query: 82 GG-----DLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILL 136
G ++ Q+++ +V + GLA YL + ++IHRD+K NILL
Sbjct: 99 GSASDLLEVHKKPLQEVEIAAV--------THGALQGLA--YLHSHNMIHRDVKAGNILL 148
Query: 137 DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVT 196
E G + DF A+++ A GT ++APE+ L A DE Y VD WSLG+T
Sbjct: 149 SEPGLVKLGDFGSASIMAP---ANXFVGTPYWMAPEVIL-AMDEG-QYDGKVDVWSLGIT 203
Query: 197 LFEILARGRP-FDIHSNTSVKDVKAIIYSPVHYPTAWSE 234
E+ R P F++++ +++ + A SP WSE
Sbjct: 204 CIELAERKPPLFNMNAMSALYHI-AQNESPALQSGHWSE 241
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 106/217 (48%), Gaps = 22/217 (10%)
Query: 24 QMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGG 83
++ A+K M S + +++++E+ L L HP + C+ E ++V + LG
Sbjct: 80 EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS 139
Query: 84 -----DLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDE 138
++ Q+++ +V + GLA YL + ++IHRD+K NILL E
Sbjct: 140 ASDLLEVHKKPLQEVEIAAV--------THGALQGLA--YLHSHNMIHRDVKAGNILLSE 189
Query: 139 EGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLF 198
G + DF A+++ A GT ++APE+ L A DE Y VD WSLG+T
Sbjct: 190 PGLVKLGDFGSASIMAP---ANXFVGTPYWMAPEVIL-AMDEG-QYDGKVDVWSLGITCI 244
Query: 199 EILARGRP-FDIHSNTSVKDVKAIIYSPVHYPTAWSE 234
E+ R P F++++ +++ + A SP WSE
Sbjct: 245 ELAERKPPLFNMNAMSALYHI-AQNESPALQSGHWSE 280
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQCIERDALKNVLRE-----MEILTTLEHPFLV 61
G+ + IV+K K T YA K++ K Q R + + V RE + IL + HP ++
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQS--RASRRGVCREEIEREVSILRQVLHPNII 78
Query: 62 NLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT 121
L +++ D+ ++ +L+ GG+L + Q S+ T + G ++YL T
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDG--VNYLHT 133
Query: 122 KHIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
K I H D+KP+NI+L ++ H + DF +A +E+ ++ GT ++APEI
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI---V 190
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
E LG D WS+GV + +L+ PF
Sbjct: 191 NYEPLG--LEADMWSIGVITYILLSGASPF 218
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 32/215 (14%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHKSQCIERD---ALKNVLREMEILTTLEHPFLVN 62
G+ + IV+K K T + YA K++ K + + + + RE+ IL + HP ++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 63 LWFCFQDEEDLFMVSDLLLGGDL------RYHITQDIKFYSVGTRNDTIHLYAFELGLAL 116
L F+++ D+ ++ +L+ GG+L + +T+D + D +H
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH---------- 143
Query: 117 DYLKTKHIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPE 172
YL +K I H D+KP+NI+L ++ + DF IA +E ++ GT ++APE
Sbjct: 144 -YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 202
Query: 173 IFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
I E LG D WS+GV + +L+ PF
Sbjct: 203 I---VNYEPLG--LEADMWSIGVITYILLSGASPF 232
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 95/198 (47%), Gaps = 15/198 (7%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDE 70
T VCI +K T + A+K M + R+ L N E+ I+ H +V+++ +
Sbjct: 58 TGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN---EVVIMRDYHHDNVVDMYSSYLVG 114
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIK 130
++L++V + L GG L +T + I + AL YL + +IHRDIK
Sbjct: 115 DELWVVMEFLEGGALTDIVTH------TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 131 PDNILLDEEGHAHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
D+ILL +G ++DF A V +E + GT ++APE+ L Y VD
Sbjct: 169 SDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVI-----SRLPYGTEVD 223
Query: 190 WWSLGVTLFEILARGRPF 207
WSLG+ + E++ P+
Sbjct: 224 IWSLGIMVIEMIDGEPPY 241
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 32/215 (14%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHK---SQCIERDALKNVLREMEILTTLEHPFLVN 62
G+ + IV+K K T + YA K++ K S + + + RE+ IL + HP ++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 63 LWFCFQDEEDLFMVSDLLLGGDL------RYHITQDIKFYSVGTRNDTIHLYAFELGLAL 116
L F+++ D+ ++ +L+ GG+L + +T+D + D +H
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH---------- 122
Query: 117 DYLKTKHIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPE 172
YL +K I H D+KP+NI+L ++ + DF IA +E ++ GT ++APE
Sbjct: 123 -YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181
Query: 173 IFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
I E LG D WS+GV + +L+ PF
Sbjct: 182 I---VNYEPLG--LEADMWSIGVITYILLSGASPF 211
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFC 66
G +V++ K T +A K ++ + RD + + RE I L+HP +V L
Sbjct: 15 GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDS 73
Query: 67 FQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIH 126
Q+E ++V DL+ GG+L I +FYS + I ++ ++ Y + I+H
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQ----QILESIAYCHSNGIVH 128
Query: 127 RDIKPDNILLDEEGHA---HITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
R++KP+N+LL + + DF +A + +++ +GT Y++PE+ +
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL-----KKDP 183
Query: 184 YSYSVDWWSLGVTLFEILARGRPF 207
YS VD W+ GV L+ +L PF
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFC 66
G +V++ K T +A K ++ + RD + + RE I L+HP +V L
Sbjct: 15 GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDS 73
Query: 67 FQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIH 126
Q+E ++V DL+ GG+L I +FYS + I ++ ++ Y + I+H
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQ----QILESIAYCHSNGIVH 128
Query: 127 RDIKPDNILLDEEGHA---HITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
R++KP+N+LL + + DF +A + +++ +GT Y++PE+ +
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL-----KKDP 183
Query: 184 YSYSVDWWSLGVTLFEILARGRPF 207
YS VD W+ GV L+ +L PF
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFC 66
G +V++ K T +A K ++ + RD + + RE I L+HP +V L
Sbjct: 14 GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDS 72
Query: 67 FQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIH 126
Q+E ++V DL+ GG+L I +FYS + I ++ ++ Y + I+H
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQ----QILESIAYCHSNGIVH 127
Query: 127 RDIKPDNILLDEEGHA---HITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
R++KP+N+LL + + DF +A + +++ +GT Y++PE+ +
Sbjct: 128 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL-----KKDP 182
Query: 184 YSYSVDWWSLGVTLFEILARGRPF 207
YS VD W+ GV L+ +L PF
Sbjct: 183 YSKPVDIWACGVILYILLVGYPPF 206
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 32/215 (14%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHK---SQCIERDALKNVLREMEILTTLEHPFLVN 62
G+ + IV+K K T + YA K++ K S + + + RE+ IL + HP ++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 63 LWFCFQDEEDLFMVSDLLLGGDL------RYHITQDIKFYSVGTRNDTIHLYAFELGLAL 116
L F+++ D+ ++ +L+ GG+L + +T+D + D +H
Sbjct: 80 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH---------- 129
Query: 117 DYLKTKHIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPE 172
YL +K I H D+KP+NI+L ++ + DF IA +E ++ GT ++APE
Sbjct: 130 -YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 188
Query: 173 IFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
I E LG D WS+GV + +L+ PF
Sbjct: 189 I---VNYEPLG--LEADMWSIGVITYILLSGASPF 218
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 106/206 (51%), Gaps = 8/206 (3%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEI-LTTLEHPFLVNLWFCFQDEEDLFMVSDLL 80
+ Q+ A+K + + + K +L +++I + T++ PF V + E D+++ +L+
Sbjct: 75 SGQIMAVKRIRAT--VNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM 132
Query: 81 LGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK-HIIHRDIKPDNILLDEE 139
+++ K ++ D + A + AL++L +K +IHRD+KP N+L++
Sbjct: 133 DTSLDKFYKQVIDKGQTIP--EDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINAL 190
Query: 140 GHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFE 199
G + DF I+ L ++ T +G KPY+APE ++ GYS D WSLG+T+ E
Sbjct: 191 GQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK-GYSVKSDIWSLGITMIE 249
Query: 200 ILARGRPFDIHSNTSVKDVKAIIYSP 225
+ P+D T + +K ++ P
Sbjct: 250 LAILRFPYD-SWGTPFQQLKQVVEEP 274
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 105/235 (44%), Gaps = 13/235 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
KV Q K+T + A K + + L++ + E++IL + +HP +V L F E
Sbjct: 51 GKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 107
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+L+++ + GG + + + I + + AL+YL IIHRD+K
Sbjct: 108 NLWILIEFCAGGAVDAVMLE----LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 132 DNILLDEEGHAHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
NIL +G + DF + A Q GT ++APE+ + T + Y Y D
Sbjct: 164 GNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADV 223
Query: 191 WSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSP---VHYPTAWSESTKHLLSQ 242
WSLG+TL E+ P H ++ + I S + P+ WS + K L +
Sbjct: 224 WSLGITLIEMAEIEPPH--HELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKK 276
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFC 66
G +V++ K T +A K ++ + RD + + RE I L+HP +V L
Sbjct: 38 GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDS 96
Query: 67 FQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIH 126
Q+E ++V DL+ GG+L I +FYS + I ++ ++ Y + I+H
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQ----QILESIAYCHSNGIVH 151
Query: 127 RDIKPDNILLDEEGHA---HITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG 183
R++KP+N+LL + + DF +A + +++ +GT Y++PE+ +
Sbjct: 152 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL-----KKDP 206
Query: 184 YSYSVDWWSLGVTLFEILARGRPF 207
YS VD W+ GV L+ +L PF
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPF 230
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 14/207 (6%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V + + K T A+K + KS +L E+ +L L+HP ++ L+ F+D+
Sbjct: 18 GEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKR 77
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+ ++V ++ GG+L I KF V + + YL +I+HRD+KP
Sbjct: 78 NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS-----GTTYLHKHNIVHRDLKP 132
Query: 132 DNILLDEEGH---AHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N+LL+ + I DF ++ E GT YIAPE+ DE
Sbjct: 133 ENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDE------KC 186
Query: 189 DWWSLGVTLFEILARGRPFDIHSNTSV 215
D WS GV L+ +L PF ++ +
Sbjct: 187 DVWSCGVILYILLCGYPPFGGQTDQEI 213
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 19/207 (9%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS F G C+ +K T +++ K+++ +++ +KN E+ I+ L HP L+NL
Sbjct: 60 GSGAF-GVVHRCV--EKATGRVFVAKFINTPYPLDKYTVKN---EISIMNQLHHPKLINL 113
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHI-TQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
F+D+ ++ ++ + L GG+L I +D K N Y + L ++
Sbjct: 114 HDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVIN-----YMRQACEGLKHMHEH 168
Query: 123 HIIHRDIKPDNILLD--EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDE 180
I+H DIKP+NI+ + + I DF +AT L +++ + T + APEI E
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEI---VDRE 225
Query: 181 VLGYSYSVDWWSLGVTLFEILARGRPF 207
+G + D W++GV + +L+ PF
Sbjct: 226 PVG--FYTDMWAIGVLGYVLLSGLSPF 250
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 23/234 (9%)
Query: 19 KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSD 78
KK Q YA K ++ + RD K + RE I L+HP +V L +E ++V D
Sbjct: 52 KKTPTQEYAAKIINTKKLSARDHQK-LEREARICRLLKHPNIVRLHDSISEEGFHYLVFD 110
Query: 79 LLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDE 138
L+ GG+L I ++YS + IH ++ +++++ I+HRD+KP+N+LL
Sbjct: 111 LVTGGELFEDIVAR-EYYSEADASHCIH----QILESVNHIHQHDIVHRDLKPENLLLAS 165
Query: 139 E---GHAHITDFNIA-TVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLG 194
+ + DF +A V E Q +GT Y++PE+ Y VD W+ G
Sbjct: 166 KCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDP-----YGKPVDIWACG 220
Query: 195 VTLFEILARGRPF-DIHSNTSVKDVKAIIYSPVHYPTA-WSEST---KHLLSQV 243
V L+ +L PF D + + +KA Y +P+ W T K+L++Q+
Sbjct: 221 VILYILLVGYPPFWDEDQHKLYQQIKAGAYD---FPSPEWDTVTPEAKNLINQM 271
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 115 ALDYLKTK-HIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEI 173
AL++LK IIHRDIKP NILLD G+ + DF I+ L ++ T +G +PY+APE
Sbjct: 137 ALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPE- 195
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
+ + GY D WSLG+TL+E LA GR
Sbjct: 196 RIDPSASRQGYDVRSDVWSLGITLYE-LATGR 226
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 109/216 (50%), Gaps = 17/216 (7%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDE 70
T VC+ ++K + + A+K M + R+ L N E+ I+ +H +V ++ +
Sbjct: 58 TGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFN---EVVIMRDYQHFNVVEMYKSYLVG 114
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIK 130
E+L+++ + L GG L ++Q V + I + AL YL + +IHRDIK
Sbjct: 115 EELWVLMEFLQGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
Query: 131 PDNILLDEEGHAHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVD 189
D+ILL +G ++DF A + ++ + GT ++APE+ + Y+ VD
Sbjct: 169 SDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSL-----YATEVD 223
Query: 190 WWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSP 225
WSLG+ + E++ P+ S++ V+ +K + SP
Sbjct: 224 IWSLGIMVIEMVDGEPPY--FSDSPVQAMKRLRDSP 257
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 20/193 (10%)
Query: 20 KDTKQMYAMKYMHKSQCIERDALKNVLREMEILT---TLEHPFLVNLW-FCFQDEEDLFM 75
K+ + A+K + + Q E + +RE+ +L T EHP +V L+ C D
Sbjct: 34 KNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92
Query: 76 VSDLLLGGDLRYHITQDIKFY-----SVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIK 130
L+ H+ QD+ Y G +TI F+L LD+L + ++HRD+K
Sbjct: 93 KLTLVF-----EHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLK 147
Query: 131 PDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
P NIL+ G + DF +A + TS+ T Y APE+ L ++ Y+ VD
Sbjct: 148 PQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS-----YATPVDL 202
Query: 191 WSLGVTLFEILAR 203
WS+G E+ R
Sbjct: 203 WSVGCIFAEMFRR 215
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 20/193 (10%)
Query: 20 KDTKQMYAMKYMHKSQCIERDALKNVLREMEILT---TLEHPFLVNLW-FCFQDEEDLFM 75
K+ + A+K + + Q E + +RE+ +L T EHP +V L+ C D
Sbjct: 34 KNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92
Query: 76 VSDLLLGGDLRYHITQDIKFY-----SVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIK 130
L+ H+ QD+ Y G +TI F+L LD+L + ++HRD+K
Sbjct: 93 KLTLVF-----EHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLK 147
Query: 131 PDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
P NIL+ G + DF +A + TS+ T Y APE+ L ++ Y+ VD
Sbjct: 148 PQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS-----YATPVDL 202
Query: 191 WSLGVTLFEILAR 203
WS+G E+ R
Sbjct: 203 WSVGCIFAEMFRR 215
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 16/192 (8%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLL 81
T Q A++ M+ Q +++ + N E+ ++ ++P +VN + ++L++V + L
Sbjct: 44 TGQEVAIRQMNLQQQPKKELIIN---EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100
Query: 82 GGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH 141
GG L +T+ I E AL++L + +IHRDIK DNILL +G
Sbjct: 101 GGSLTDVVTETC------MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS 154
Query: 142 AHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEI 200
+TDF A + E ++M GT ++APE+ Y VD WSLG+ E+
Sbjct: 155 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK-----AYGPKVDIWSLGIMAIEM 209
Query: 201 LARGRPFDIHSN 212
+ G P ++ N
Sbjct: 210 I-EGEPPYLNEN 220
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 20/193 (10%)
Query: 20 KDTKQMYAMKYMHKSQCIERDALKNVLREMEILT---TLEHPFLVNLW-FCFQDEEDLFM 75
K+ + A+K + + Q E + +RE+ +L T EHP +V L+ C D
Sbjct: 34 KNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92
Query: 76 VSDLLLGGDLRYHITQDIKFY-----SVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIK 130
L+ H+ QD+ Y G +TI F+L LD+L + ++HRD+K
Sbjct: 93 KLTLVF-----EHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLK 147
Query: 131 PDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
P NIL+ G + DF +A + TS+ T Y APE+ L ++ Y+ VD
Sbjct: 148 PQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSS-----YATPVDL 202
Query: 191 WSLGVTLFEILAR 203
WS+G E+ R
Sbjct: 203 WSVGCIFAEMFRR 215
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 105/206 (50%), Gaps = 8/206 (3%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEI-LTTLEHPFLVNLWFCFQDEEDLFMVSDLL 80
+ Q+ A+K + + + K +L +++I + T++ PF V + E D+++ +L+
Sbjct: 31 SGQIMAVKRIRAT--VNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM 88
Query: 81 LGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK-HIIHRDIKPDNILLDEE 139
+++ K ++ D + A + AL++L +K +IHRD+KP N+L++
Sbjct: 89 DTSLDKFYKQVIDKGQTI--PEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINAL 146
Query: 140 GHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFE 199
G + DF I+ L ++ +G KPY+APE ++ GYS D WSLG+T+ E
Sbjct: 147 GQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQK-GYSVKSDIWSLGITMIE 205
Query: 200 ILARGRPFDIHSNTSVKDVKAIIYSP 225
+ P+D T + +K ++ P
Sbjct: 206 LAILRFPYD-SWGTPFQQLKQVVEEP 230
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDE 70
T VCI + + ++ A+K M + R+ L N E+ I+ +H +V ++ +
Sbjct: 37 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYNSYLVG 93
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGL--ALDYLKTKHIIHRD 128
++L++V + L GG L +T TR + + A L + AL L + +IHRD
Sbjct: 94 DELWVVMEFLEGGALTDIVTH--------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 145
Query: 129 IKPDNILLDEEGHAHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYS 187
IK D+ILL +G ++DF A V +E + GT ++APE+ L Y
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-----SRLPYGPE 200
Query: 188 VDWWSLGVTLFEILARGRPF 207
VD WSLG+ + E++ P+
Sbjct: 201 VDIWSLGIMVIEMVDGEPPY 220
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 16/192 (8%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLL 81
T Q A++ M+ Q +++ + N E+ ++ ++P +VN + ++L++V + L
Sbjct: 44 TGQEVAIRQMNLQQQPKKELIIN---EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100
Query: 82 GGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH 141
GG L +T+ I E AL++L + +IHRDIK DNILL +G
Sbjct: 101 GGSLTDVVTETC------MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS 154
Query: 142 AHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEI 200
+TDF A + E + M GT ++APE+ Y VD WSLG+ E+
Sbjct: 155 VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRK-----AYGPKVDIWSLGIMAIEM 209
Query: 201 LARGRPFDIHSN 212
+ G P ++ N
Sbjct: 210 I-EGEPPYLNEN 220
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDE 70
T VCI + + ++ A+K M + R+ L N E+ I+ +H +V ++ +
Sbjct: 33 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYNSYLVG 89
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGL--ALDYLKTKHIIHRD 128
++L++V + L GG L +T TR + + A L + AL L + +IHRD
Sbjct: 90 DELWVVMEFLEGGALTDIVTH--------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 141
Query: 129 IKPDNILLDEEGHAHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYS 187
IK D+ILL +G ++DF A V +E + GT ++APE+ L Y
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-----SRLPYGPE 196
Query: 188 VDWWSLGVTLFEILARGRPF 207
VD WSLG+ + E++ P+
Sbjct: 197 VDIWSLGIMVIEMVDGEPPY 216
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V I +K T+ A K + K + D K +E+EI+ +L+HP ++ L+ F+D
Sbjct: 23 GEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK---QEIEIMKSLDHPNIIRLYETFEDNT 79
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
D+++V +L GG+L + F +D + L A+ Y ++ HRD+KP
Sbjct: 80 DIYLVMELCTGGELFERVVHKRVF----RESDAARIMKDVLS-AVAYCHKLNVAHRDLKP 134
Query: 132 DNILL---DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N L + + DF +A + ++ + GT Y++P++ E L Y
Sbjct: 135 ENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL-----EGL-YGPEC 188
Query: 189 DWWSLGVTLFEILARGRPFDIHSNTSV 215
D WS GV ++ +L PF ++ V
Sbjct: 189 DEWSAGVMMYVLLCGYPPFSAPTDXEV 215
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V I +K T+ A K + K + D K +E+EI+ +L+HP ++ L+ F+D
Sbjct: 40 GEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK---QEIEIMKSLDHPNIIRLYETFEDNT 96
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
D+++V +L GG+L + F +D + L A+ Y ++ HRD+KP
Sbjct: 97 DIYLVMELCTGGELFERVVHKRVF----RESDAARIMKDVLS-AVAYCHKLNVAHRDLKP 151
Query: 132 DNILL---DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+N L + + DF +A + ++ + GT Y++P++ E L Y
Sbjct: 152 ENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL-----EGL-YGPEC 205
Query: 189 DWWSLGVTLFEILARGRPFDIHSNTSV 215
D WS GV ++ +L PF ++ V
Sbjct: 206 DEWSAGVMMYVLLCGYPPFSAPTDXEV 232
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDE 70
T VCI + + ++ A+K M + R+ L N E+ I+ +H +V ++ +
Sbjct: 44 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYNSYLVG 100
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGL--ALDYLKTKHIIHRD 128
++L++V + L GG L +T TR + + A L + AL L + +IHRD
Sbjct: 101 DELWVVMEFLEGGALTDIVTH--------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 152
Query: 129 IKPDNILLDEEGHAHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYS 187
IK D+ILL +G ++DF A V +E + GT ++APE+ L Y
Sbjct: 153 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-----SRLPYGPE 207
Query: 188 VDWWSLGVTLFEILARGRPF 207
VD WSLG+ + E++ P+
Sbjct: 208 VDIWSLGIMVIEMVDGEPPY 227
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 16/192 (8%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLL 81
T Q A++ M+ Q +++ + N E+ ++ ++P +VN + ++L++V + L
Sbjct: 45 TGQEVAIRQMNLQQQPKKELIIN---EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 101
Query: 82 GGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH 141
GG L +T+ I E AL++L + +IHRDIK DNILL +G
Sbjct: 102 GGSLTDVVTETC------MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS 155
Query: 142 AHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEI 200
+TDF A + E + M GT ++APE+ Y VD WSLG+ E+
Sbjct: 156 VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRK-----AYGPKVDIWSLGIMAIEM 210
Query: 201 LARGRPFDIHSN 212
+ G P ++ N
Sbjct: 211 I-EGEPPYLNEN 221
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 16/192 (8%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLL 81
T Q A++ M+ Q +++ + N E+ ++ ++P +VN + ++L++V + L
Sbjct: 44 TGQEVAIRQMNLQQQPKKELIIN---EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100
Query: 82 GGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH 141
GG L +T+ I E AL++L + +IHRDIK DNILL +G
Sbjct: 101 GGSLTDVVTETC------MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS 154
Query: 142 AHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEI 200
+TDF A + E + M GT ++APE+ Y VD WSLG+ E+
Sbjct: 155 VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRK-----AYGPKVDIWSLGIMAIEM 209
Query: 201 LARGRPFDIHSN 212
+ G P ++ N
Sbjct: 210 I-EGEPPYLNEN 220
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDE 70
T VCI + + ++ A+K M + R+ L N E+ I+ +H +V ++ +
Sbjct: 42 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYNSYLVG 98
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGL--ALDYLKTKHIIHRD 128
++L++V + L GG L +T TR + + A L + AL L + +IHRD
Sbjct: 99 DELWVVMEFLEGGALTDIVTH--------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 150
Query: 129 IKPDNILLDEEGHAHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYS 187
IK D+ILL +G ++DF A V +E + GT ++APE+ L Y
Sbjct: 151 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-----SRLPYGPE 205
Query: 188 VDWWSLGVTLFEILARGRPF 207
VD WSLG+ + E++ P+
Sbjct: 206 VDIWSLGIMVIEMVDGEPPY 225
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 109/241 (45%), Gaps = 21/241 (8%)
Query: 13 KVCIVQKKDTKQMYAMKYMHKSQCIERDAL--KNVLREMEILTTLEHPFLVNLWFCFQDE 70
+ CI ++T Q +A+K + ++ L +++ RE I L+HP +V L + +
Sbjct: 43 RRCI--NRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD 100
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIK 130
L+MV + + G DL + I + V + H Y ++ AL Y +IIHRD+K
Sbjct: 101 GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH-YMRQILEALRYCHDNNIIHRDVK 159
Query: 131 PDNILL---DEEGHAHITDFNIATVLEENQL-ATSMSGTKPYIAPEIFLVATDEVLGYSY 186
P +LL + + F +A L E+ L A GT ++APE+ Y
Sbjct: 160 PHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREP-----YGK 214
Query: 187 SVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHY-PTAW---SESTKHLLSQ 242
VD W GV LF +L+ PF T + + II P W SES K L+ +
Sbjct: 215 PVDVWGCGVILFILLSGCLPF---YGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRR 271
Query: 243 V 243
+
Sbjct: 272 M 272
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 22/173 (12%)
Query: 39 RDALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS 97
+ A++N ++RE+++L P++V + F + ++ + + + GG L D
Sbjct: 63 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL------DQVLKK 116
Query: 98 VGTRNDTIHLYAFELGL--ALDYLKTKH-IIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
G + I L + + L YL+ KH I+HRD+KP NIL++ G + DF ++ L
Sbjct: 117 AGRIPEQI-LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 175
Query: 155 ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV--DWWSLGVTLFEILARGR 205
++ +A S GT+ Y++PE + G YSV D WS+G++L E +A GR
Sbjct: 176 DS-MANSFVGTRSYMSPE-------RLQGTHYSVQSDIWSMGLSLVE-MAVGR 219
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 111/247 (44%), Gaps = 22/247 (8%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQCIERDAL--KNVLREMEILTTLEHPFLVNLW 64
G +V++ ++T Q +A+K + ++ L +++ RE I L+HP +V L
Sbjct: 33 GKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELL 92
Query: 65 FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHI 124
+ + L+MV + + G DL + I + V + H Y ++ AL Y +I
Sbjct: 93 ETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH-YMRQILEALRYCHDNNI 151
Query: 125 IHRDIKPDNILL---DEEGHAHITDFNIATVLEENQL-ATSMSGTKPYIAPEIFLVATDE 180
IHRD+KP +LL + + F +A L E+ L A GT ++APE+
Sbjct: 152 IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREP-- 209
Query: 181 VLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHY-PTAW---SEST 236
Y VD W GV LF +L+ PF T + + II P W SES
Sbjct: 210 ---YGKPVDVWGCGVILFILLSGCLPF---YGTKERLFEGIIKGKYKMNPRQWSHISESA 263
Query: 237 KHLLSQV 243
K L+ ++
Sbjct: 264 KDLVRRM 270
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 19/185 (10%)
Query: 47 REMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT-I 105
+E+ +L+ + P++ + + L+++ + L GG + G +T I
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSA-------LDLLKPGPLEETYI 118
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS-MSG 164
E+ LDYL ++ IHRDIK N+LL E+G + DF +A L + Q+ + G
Sbjct: 119 ATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVG 178
Query: 165 TKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYS 224
T ++APE+ + Y + D WSLG+T E LA+G P N+ + ++ +
Sbjct: 179 TPFWMAPEVIKQS-----AYDFKADIWSLGITAIE-LAKGEP----PNSDLHPMRVLFLI 228
Query: 225 PVHYP 229
P + P
Sbjct: 229 PKNSP 233
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDE 70
T VCI + + ++ A+K M + R+ L N E+ I+ +H +V ++ +
Sbjct: 87 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYNSYLVG 143
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGL--ALDYLKTKHIIHRD 128
++L++V + L GG L +T TR + + A L + AL L + +IHRD
Sbjct: 144 DELWVVMEFLEGGALTDIVTH--------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 195
Query: 129 IKPDNILLDEEGHAHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYS 187
IK D+ILL +G ++DF A V +E + GT ++APE+ L Y
Sbjct: 196 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-----SRLPYGPE 250
Query: 188 VDWWSLGVTLFEILARGRPF 207
VD WSLG+ + E++ P+
Sbjct: 251 VDIWSLGIMVIEMVDGEPPY 270
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 22/173 (12%)
Query: 39 RDALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS 97
+ A++N ++RE+++L P++V + F + ++ + + + GG L D
Sbjct: 44 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL------DQVLKK 97
Query: 98 VGTRNDTIHLYAFELGL--ALDYLKTKH-IIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
G + I L + + L YL+ KH I+HRD+KP NIL++ G + DF ++ L
Sbjct: 98 AGRIPEQI-LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156
Query: 155 ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV--DWWSLGVTLFEILARGR 205
++ +A S GT+ Y++PE + G YSV D WS+G++L E +A GR
Sbjct: 157 DS-MANSFVGTRSYMSPE-------RLQGTHYSVQSDIWSMGLSLVE-MAVGR 200
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 22/173 (12%)
Query: 39 RDALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS 97
+ A++N ++RE+++L P++V + F + ++ + + + GG L D
Sbjct: 106 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL------DQVLKK 159
Query: 98 VGTRNDTIHLYAFELGL--ALDYLKTKH-IIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
G + I L + + L YL+ KH I+HRD+KP NIL++ G + DF ++ L
Sbjct: 160 AGRIPEQI-LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 218
Query: 155 ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV--DWWSLGVTLFEILARGR 205
++ +A S GT+ Y++PE + G YSV D WS+G++L E +A GR
Sbjct: 219 DS-MANSFVGTRSYMSPE-------RLQGTHYSVQSDIWSMGLSLVE-MAVGR 262
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 18/171 (10%)
Query: 39 RDALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS 97
+ A++N ++RE+++L P++V + F + ++ + + + GG L + + +
Sbjct: 44 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-- 101
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKH-IIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
+ + + L YL+ KH I+HRD+KP NIL++ G + DF ++ L ++
Sbjct: 102 ---PEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 158
Query: 157 QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV--DWWSLGVTLFEILARGR 205
+A S GT+ Y++PE + G YSV D WS+G++L E +A GR
Sbjct: 159 -MANSFVGTRSYMSPE-------RLQGTHYSVQSDIWSMGLSLVE-MAVGR 200
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 26/211 (12%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQC------IERDALKNVLREMEILTTLEHPFL 60
G+ + IV+K K T YA K++ K Q + R+ ++ RE+ IL + H +
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---REVSILRQVLHHNV 77
Query: 61 VNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLK 120
+ L +++ D+ ++ +L+ GG+L + Q S+ T + G+ +YL
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGV--NYLH 132
Query: 121 TKHIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLV 176
TK I H D+KP+NI+L ++ H + DF +A +E+ ++ GT ++APEI
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI--- 189
Query: 177 ATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
E LG D WS+GV + +L+ PF
Sbjct: 190 VNYEPLG--LEADMWSIGVITYILLSGASPF 218
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 18/171 (10%)
Query: 39 RDALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS 97
+ A++N ++RE+++L P++V + F + ++ + + + GG L + + +
Sbjct: 44 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-- 101
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKH-IIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
+ + + L YL+ KH I+HRD+KP NIL++ G + DF ++ L ++
Sbjct: 102 ---PEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 158
Query: 157 QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV--DWWSLGVTLFEILARGR 205
+A S GT+ Y++PE + G YSV D WS+G++L E +A GR
Sbjct: 159 -MANSFVGTRSYMSPE-------RLQGTHYSVQSDIWSMGLSLVE-MAVGR 200
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 26/211 (12%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQC------IERDALKNVLREMEILTTLEHPFL 60
G+ + IV+K K T YA K++ K Q + R+ ++ RE+ IL + H +
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---REVSILRQVLHHNV 77
Query: 61 VNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLK 120
+ L +++ D+ ++ +L+ GG+L + Q S+ T + G+ +YL
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGV--NYLH 132
Query: 121 TKHIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLV 176
TK I H D+KP+NI+L ++ H + DF +A +E+ ++ GT ++APEI
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI--- 189
Query: 177 ATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
E LG D WS+GV + +L+ PF
Sbjct: 190 VNYEPLG--LEADMWSIGVITYILLSGASPF 218
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 26/211 (12%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQC------IERDALKNVLREMEILTTLEHPFL 60
G+ + IV+K K T YA K++ K Q + R+ ++ RE+ IL + H +
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---REVSILRQVLHHNV 77
Query: 61 VNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLK 120
+ L +++ D+ ++ +L+ GG+L + Q S+ T + G+ +YL
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGV--NYLH 132
Query: 121 TKHIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLV 176
TK I H D+KP+NI+L ++ H + DF +A +E+ ++ GT ++APEI
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI--- 189
Query: 177 ATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
E LG D WS+GV + +L+ PF
Sbjct: 190 VNYEPLG--LEADMWSIGVITYILLSGASPF 218
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 18/171 (10%)
Query: 39 RDALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS 97
+ A++N ++RE+++L P++V + F + ++ + + + GG L + + +
Sbjct: 44 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-- 101
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKH-IIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
+ + + L YL+ KH I+HRD+KP NIL++ G + DF ++ L ++
Sbjct: 102 ---PEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 158
Query: 157 QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV--DWWSLGVTLFEILARGR 205
+A S GT+ Y++PE + G YSV D WS+G++L E +A GR
Sbjct: 159 -MANSFVGTRSYMSPE-------RLQGTHYSVQSDIWSMGLSLVE-MAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 91/171 (53%), Gaps = 18/171 (10%)
Query: 39 RDALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS 97
+ A++N ++RE+++L P++V + F + ++ + + + GG L + + +
Sbjct: 44 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-- 101
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKH-IIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
+ + + L YL+ KH I+HRD+KP NIL++ G + DF ++ L ++
Sbjct: 102 ---PEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 158
Query: 157 QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV--DWWSLGVTLFEILARGR 205
+A S GT+ Y++PE + G YSV D WS+G++L E +A GR
Sbjct: 159 -MANSFVGTRSYMSPE-------RLQGTHYSVQSDIWSMGLSLVE-MAVGR 200
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 16/192 (8%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLL 81
T Q A++ M+ Q +++ + N E+ ++ ++P +VN + ++L++V + L
Sbjct: 45 TGQEVAIRQMNLQQQPKKELIIN---EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 101
Query: 82 GGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH 141
GG L +T+ I E AL++L + +IHR+IK DNILL +G
Sbjct: 102 GGSLTDVVTETC------MDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGS 155
Query: 142 AHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEI 200
+TDF A + E ++M GT ++APE+ Y VD WSLG+ E+
Sbjct: 156 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK-----AYGPKVDIWSLGIMAIEM 210
Query: 201 LARGRPFDIHSN 212
+ G P ++ N
Sbjct: 211 I-EGEPPYLNEN 221
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 47 REMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT-I 105
+E+ +L+ + P++ + + + L+++ + L GG + G ++T I
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA-------LDLLEPGPLDETQI 106
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA-TSMSG 164
E+ LDYL ++ IHRDIK N+LL E G + DF +A L + Q+ + G
Sbjct: 107 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 166
Query: 165 TKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
T ++APE+ + Y D WSLG+T E LARG P
Sbjct: 167 TPFWMAPEVIKQS-----AYDSKADIWSLGITAIE-LARGEP 202
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 105/211 (49%), Gaps = 26/211 (12%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQC------IERDALKNVLREMEILTTLEHPFL 60
G+ + IV+K K T YA K++ K Q + R+ ++ RE+ IL + H +
Sbjct: 21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---REVSILRQVLHHNV 77
Query: 61 VNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLK 120
+ L +++ D+ ++ +L+ GG+L + Q S+ T + G+ +YL
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGV--NYLH 132
Query: 121 TKHIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLV 176
TK I H D+KP+NI+L ++ H + DF +A +E+ ++ GT ++APEI
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI--- 189
Query: 177 ATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
E LG D WS+GV + +L+ PF
Sbjct: 190 VNYEPLG--LEADMWSIGVITYILLSGASPF 218
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDE 70
T VCI + + ++ A+K M + R+ L N E+ I+ +H +V ++ +
Sbjct: 164 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN---EVVIMRDYQHENVVEMYNSYLVG 220
Query: 71 EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGL--ALDYLKTKHIIHRD 128
++L++V + L GG L +T TR + + A L + AL L + +IHRD
Sbjct: 221 DELWVVMEFLEGGALTDIVTH--------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRD 272
Query: 129 IKPDNILLDEEGHAHITDFNI-ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYS 187
IK D+ILL +G ++DF A V +E + GT ++APE+ L Y
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI-----SRLPYGPE 327
Query: 188 VDWWSLGVTLFEILARGRPF 207
VD WSLG+ + E++ P+
Sbjct: 328 VDIWSLGIMVIEMVDGEPPY 347
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 22/173 (12%)
Query: 39 RDALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS 97
+ A++N ++RE+++L P++V + F + ++ + + + GG L D
Sbjct: 71 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL------DQVLKK 124
Query: 98 VGTRNDTIHLYAFELGL--ALDYLKTKH-IIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
G + I L + + L YL+ KH I+HRD+KP NIL++ G + DF ++ L
Sbjct: 125 AGRIPEQI-LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183
Query: 155 ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV--DWWSLGVTLFEILARGR 205
++ +A S GT+ Y++PE + G YSV D WS+G++L E +A GR
Sbjct: 184 DS-MANSFVGTRSYMSPE-------RLQGTHYSVQSDIWSMGLSLVE-MAVGR 227
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 105/212 (49%), Gaps = 26/212 (12%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHKSQC------IERDALKNVLREMEILTTLEHPF 59
G+ + IV+K K T YA K++ K Q + R+ ++ RE+ IL + H
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE---REVSILRQVLHHN 76
Query: 60 LVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYL 119
++ L +++ D+ ++ +L+ GG+L + Q S+ T + G+ +YL
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGV--NYL 131
Query: 120 KTKHIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFL 175
TK I H D+KP+NI+L ++ H + DF +A +E+ ++ GT ++APEI
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEI-- 189
Query: 176 VATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
E LG D WS+GV + +L+ PF
Sbjct: 190 -VNYEPLG--LEADMWSIGVITYILLSGASPF 218
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 47 REMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT-I 105
+E+ +L+ + P++ + + + L+++ + L GG + G ++T I
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA-------LDLLEPGPLDETQI 126
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA-TSMSG 164
E+ LDYL ++ IHRDIK N+LL E G + DF +A L + Q+ + G
Sbjct: 127 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVG 186
Query: 165 TKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
T ++APE+ + Y D WSLG+T E LARG P
Sbjct: 187 TPFWMAPEVIKQS-----AYDSKADIWSLGITAIE-LARGEP 222
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 47 REMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT-I 105
+E+ +L+ + P++ + + + L+++ + L GG + G ++T I
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA-------LDLLEPGPLDETQI 121
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS-MSG 164
E+ LDYL ++ IHRDIK N+LL E G + DF +A L + Q+ + G
Sbjct: 122 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVG 181
Query: 165 TKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
T ++APE+ + Y D WSLG+T E LARG P
Sbjct: 182 TPFWMAPEVIKQS-----AYDSKADIWSLGITAIE-LARGEP 217
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 47 REMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT-I 105
+E+ +L+ + P++ + + + L+++ + L GG + G ++T I
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA-------LDLLEPGPLDETQI 106
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS-MSG 164
E+ LDYL ++ IHRDIK N+LL E G + DF +A L + Q+ + G
Sbjct: 107 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVG 166
Query: 165 TKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
T ++APE+ + Y D WSLG+T E LARG P
Sbjct: 167 TPFWMAPEVIKQS-----AYDSKADIWSLGITAIE-LARGEP 202
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 16/210 (7%)
Query: 19 KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSD 78
K T Q YA K ++ + RD K + RE I L+HP +V L +E ++V D
Sbjct: 25 KIPTGQEYAAKIINTKKLSARDHQK-LEREARICRLLKHPNIVRLHDSISEEGFHYLVFD 83
Query: 79 LLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDE 138
L+ GG+L I ++YS + I ++ ++++ I+HRD+KP+N+LL
Sbjct: 84 LVTGGELFEDIVAR-EYYSEADASHCIQ----QILESVNHCHLNGIVHRDLKPENLLLAS 138
Query: 139 EGHA---HITDFNIATVLEENQLA-TSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLG 194
+ + DF +A ++ +Q A +GT Y++PE+ Y VD W+ G
Sbjct: 139 KSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP-----YGKPVDMWACG 193
Query: 195 VTLFEILARGRPF-DIHSNTSVKDVKAIIY 223
V L+ +L PF D + + +KA Y
Sbjct: 194 VILYILLVGYPPFWDEDQHRLYQQIKAGAY 223
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 91/173 (52%), Gaps = 22/173 (12%)
Query: 39 RDALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS 97
+ A++N ++RE+++L P++V + F + ++ + + + GG L D
Sbjct: 47 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL------DQVLKK 100
Query: 98 VGTRNDTIHLYAFELGL--ALDYLKTKH-IIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
G + I L + + L YL+ KH I+HRD+KP NIL++ G + DF ++ L
Sbjct: 101 AGRIPEQI-LGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL- 158
Query: 155 ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV--DWWSLGVTLFEILARGR 205
+++A GT+ Y++PE + G YSV D WS+G++L E +A GR
Sbjct: 159 IDEMANEFVGTRSYMSPE-------RLQGTHYSVQSDIWSMGLSLVE-MAVGR 203
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 15/193 (7%)
Query: 19 KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSD 78
K T Q YA K ++ + RD K + RE I L+HP +V L +E ++V D
Sbjct: 25 KIPTGQEYAAKIINTKKLSARDHQK-LEREARICRLLKHPNIVRLHDSISEEGFHYLVFD 83
Query: 79 LLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDE 138
L+ GG+L I ++YS + I ++ ++++ I+HRD+KP+N+LL
Sbjct: 84 LVTGGELFEDIVAR-EYYSEADASHCIQ----QILESVNHCHLNGIVHRDLKPENLLLAS 138
Query: 139 EGHA---HITDFNIATVLEENQLA-TSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLG 194
+ + DF +A ++ +Q A +GT Y++PE+ Y VD W+ G
Sbjct: 139 KSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP-----YGKPVDMWACG 193
Query: 195 VTLFEILARGRPF 207
V L+ +L PF
Sbjct: 194 VILYILLVGYPPF 206
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 40 MVC--SAYDNVNKVRVAIKKISP------FEHQTYC------QRTLREIKILLAFRHENI 85
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 138
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 199 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 228
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 108/219 (49%), Gaps = 28/219 (12%)
Query: 17 VQKKDTKQMYAMKYMHKSQC-----IERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
V K+ K++ +K++ K + IE L V E+ IL+ +EH ++ + F+++
Sbjct: 44 VDKEKNKEV-VVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102
Query: 72 DLFMVSDLLLGG-DLRYHITQDIKFYSVGTRNDTIHLYAF-ELGLALDYLKTKHIIHRDI 129
+V + G DL I + + ++ + Y F +L A+ YL+ K IIHRDI
Sbjct: 103 FFQLVMEKHGSGLDLFAFIDRHPRL------DEPLASYIFRQLVSAVGYLRLKDIIHRDI 156
Query: 130 KPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSY--- 186
K +NI++ E+ + DF A LE +L + GT Y APE+ ++G Y
Sbjct: 157 KDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEV-------LMGNPYRGP 209
Query: 187 SVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSP 225
++ WSLGVTL+ ++ PF T V+A I+ P
Sbjct: 210 ELEMWSLGVTLYTLVFEENPFCELEET----VEAAIHPP 244
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 97/191 (50%), Gaps = 12/191 (6%)
Query: 18 QKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVS 77
+ KDT ++ A+K +S ++ K +RE+++L L H LVNL + ++ ++V
Sbjct: 45 RNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103
Query: 78 DLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLD 137
+ + + I D++ + G + Y F++ + + + +IIHRDIKP+NIL+
Sbjct: 104 EFV-----DHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS 158
Query: 138 EEGHAHITDFNIA-TVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVT 196
+ G + DF A T+ ++ T+ Y APE+ LV + Y +VD W++G
Sbjct: 159 QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPEL-LVGD---VKYGKAVDVWAIGCL 214
Query: 197 LFEILARGRPF 207
+ E+ G P
Sbjct: 215 VTEMFM-GEPL 224
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFC 66
GT +V + + T +A K++ +++ ++ +E++ ++ L HP LVNL
Sbjct: 166 GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR---KEIQTMSVLRHPTLVNLHDA 222
Query: 67 FQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIH 126
F+D+ ++ M+ + + GG+L + + S D Y ++ L ++ + +H
Sbjct: 223 FEDDNEMVMIYEFMSGGELFEKVADEHNKMS----EDEAVEYMRQVCKGLCHMHENNYVH 278
Query: 127 RDIKPDNILL--DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGY 184
D+KP+NI+ + DF + L+ Q +GT + APE VA + +G
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE---VAEGKPVG- 334
Query: 185 SYSVDWWSLGVTLFEILARGRPFDIHS-NTSVKDVKA 220
Y D WS+GV + +L+ PF + + ++++VK+
Sbjct: 335 -YYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS 370
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 28/216 (12%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLE-HPFLVN 62
GS C + C+ +K + Q +A+K I + N +E+ L E HP +V
Sbjct: 22 GSFSIC---RKCVHKK--SNQAFAVKI------ISKRMEANTQKEITALKLCEGHPNIVK 70
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAF-ELGLALDYLKT 121
L F D+ F+V +LL GG+L I + F ++T Y +L A+ ++
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKHF------SETEASYIMRKLVSAVSHMHD 124
Query: 122 KHIIHRDIKPDNILLDEEG---HAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVA 177
++HRD+KP+N+L +E I DF A + +NQ + T Y APE+
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL--- 181
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNT 213
GY S D WSLGV L+ +L+ PF H +
Sbjct: 182 --NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRS 215
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 38 MVC--SAYDNVNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 83
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 136
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 197 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 226
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 106/217 (48%), Gaps = 18/217 (8%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFC 66
GT +V + + T +A K++ +++ ++ +E++ ++ L HP LVNL
Sbjct: 60 GTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR---KEIQTMSVLRHPTLVNLHDA 116
Query: 67 FQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIH 126
F+D+ ++ M+ + + GG+L + + S D Y ++ L ++ + +H
Sbjct: 117 FEDDNEMVMIYEFMSGGELFEKVADEHNKMS----EDEAVEYMRQVCKGLCHMHENNYVH 172
Query: 127 RDIKPDNILL--DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGY 184
D+KP+NI+ + DF + L+ Q +GT + APE VA + +G
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE---VAEGKPVG- 228
Query: 185 SYSVDWWSLGVTLFEILARGRPFDIHS-NTSVKDVKA 220
Y D WS+GV + +L+ PF + + ++++VK+
Sbjct: 229 -YYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS 264
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 40 MVC--SAYDNVNKVRVAIKKISP------FEHQTYC------QRTLREIKILLAFRHENI 85
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 138
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 199 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 228
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 35 QCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIK 94
C + L+E + +HP +V L E ++++ +L G+LR + ++
Sbjct: 48 NCTSDSVREKFLQEALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFL--QVR 104
Query: 95 FYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
YS+ ++ LYA++L AL YL++K +HRDI N+L+ + DF ++ +E
Sbjct: 105 KYSLDL--ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 162
Query: 155 ENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHS 211
++ + G P ++APE + ++ + D W GV ++EIL G +PF
Sbjct: 163 DSTYYKASKGKLPIKWMAPE-----SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 212 NTSV----KDVKAIIYSPVHYPTAWSESTK 237
N V ++ + + P PT +S TK
Sbjct: 218 NNDVIGRIENGERLPMPPNCPPTLYSLMTK 247
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 38 MVC--SAYDNVNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 83
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 136
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 197 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 226
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 35 QCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIK 94
C + L+E + +HP +V L E ++++ +L G+LR + ++
Sbjct: 48 NCTSDSVREKFLQEALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFL--QVR 104
Query: 95 FYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
YS+ ++ LYA++L AL YL++K +HRDI N+L+ + DF ++ +E
Sbjct: 105 KYSLDL--ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 162
Query: 155 ENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHS 211
++ + G P ++APE + ++ + D W GV ++EIL G +PF
Sbjct: 163 DSTYYKASKGKLPIKWMAPE-----SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 212 NTSV----KDVKAIIYSPVHYPTAWSESTK 237
N V ++ + + P PT +S TK
Sbjct: 218 NNDVIGRIENGERLPMPPNCPPTLYSLMTK 247
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 38 MVC--SAYDNVNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 83
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 136
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 197 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 226
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C + L+E + +HP +V L E ++++ +L G+LR + ++
Sbjct: 52 CTSDSVREKFLQEALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFL--QVRK 108
Query: 96 YSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE 155
YS+ ++ LYA++L AL YL++K +HRDI N+L+ + DF ++ +E+
Sbjct: 109 YSLDL--ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 166
Query: 156 NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSN 212
+ + G P ++APE + ++ + D W GV ++EIL G +PF N
Sbjct: 167 STYYKASKGKLPIKWMAPE-----SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 221
Query: 213 TSV----KDVKAIIYSPVHYPTAWSESTK 237
V ++ + + P PT +S TK
Sbjct: 222 NDVIGRIENGERLPMPPNCPPTLYSLMTK 250
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 35 QCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIK 94
C + L+E + +HP +V L E ++++ +L G+LR + ++
Sbjct: 53 NCTSDSVREKFLQEALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFL--QVR 109
Query: 95 FYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
YS+ ++ LYA++L AL YL++K +HRDI N+L+ + DF ++ +E
Sbjct: 110 KYSLDL--ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167
Query: 155 ENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHS 211
++ + G P ++APE + ++ + D W GV ++EIL G +PF
Sbjct: 168 DSTYYKASKGKLPIKWMAPE-----SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222
Query: 212 NTSV----KDVKAIIYSPVHYPTAWSESTK 237
N V ++ + + P PT +S TK
Sbjct: 223 NNDVIGRIENGERLPMPPNCPPTLYSLMTK 252
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 35 QCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIK 94
C + L+E + +HP +V L E ++++ +L G+LR + ++
Sbjct: 76 NCTSDSVREKFLQEALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFL--QVR 132
Query: 95 FYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
YS+ ++ LYA++L AL YL++K +HRDI N+L+ + DF ++ +E
Sbjct: 133 KYSLDL--ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 190
Query: 155 ENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHS 211
++ + G P ++APE + ++ + D W GV ++EIL G +PF
Sbjct: 191 DSTYYKASKGKLPIKWMAPE-----SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 245
Query: 212 NTSV----KDVKAIIYSPVHYPTAWSESTK 237
N V ++ + + P PT +S TK
Sbjct: 246 NNDVIGRIENGERLPMPPNCPPTLYSLMTK 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHKSQCIERD---ALKNVLREMEILTTLEHPFLVN 62
G+ K +V+K K T YA K++ K + + +++ RE+ IL ++HP ++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L ++++ D+ ++ +L+ GG+L + + S+ T L G+ YL +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVY--YLHSL 133
Query: 123 HIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVAT 178
I H D+KP+NI+L + I DF +A ++ ++ GT ++APEI
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI---VN 190
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPF 207
E LG D WS+GV + +L+ PF
Sbjct: 191 YEPLG--LEADMWSIGVITYILLSGASPF 217
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C + L+E + +HP +V L E ++++ +L G+LR + ++
Sbjct: 51 CTSDSVREKFLQEALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFL--QVRK 107
Query: 96 YSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE 155
YS+ ++ LYA++L AL YL++K +HRDI N+L+ + DF ++ +E+
Sbjct: 108 YSLDL--ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 165
Query: 156 NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSN 212
+ + G P ++APE + ++ + D W GV ++EIL G +PF N
Sbjct: 166 STYYKASKGKLPIKWMAPE-----SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 220
Query: 213 TSV----KDVKAIIYSPVHYPTAWSESTK 237
V ++ + + P PT +S TK
Sbjct: 221 NDVIGRIENGERLPMPPNCPPTLYSLMTK 249
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C + L+E + +HP +V L E ++++ +L G+LR + ++
Sbjct: 46 CTSDSVREKFLQEALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFL--QVRK 102
Query: 96 YSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE 155
YS+ ++ LYA++L AL YL++K +HRDI N+L+ + DF ++ +E+
Sbjct: 103 YSLDL--ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 160
Query: 156 NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSN 212
+ + G P ++APE + ++ + D W GV ++EIL G +PF N
Sbjct: 161 STYYKASKGKLPIKWMAPE-----SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 215
Query: 213 TSV----KDVKAIIYSPVHYPTAWSESTK 237
V ++ + + P PT +S TK
Sbjct: 216 NDVIGRIENGERLPMPPNCPPTLYSLMTK 244
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 40 MVC--SAYDNVNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 85
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 138
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 199 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 228
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 38 MVC--SAYDNVNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 83
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 136
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 197 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 226
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 37/216 (17%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 58 MVC--SAYDNVNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 103
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDL-RYHITQDIKFYSVGTRNDTIHLYAFELGL 114
+ + + +D+++V+ L+ G DL + TQ + ND I + +++
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLM-GADLYKLLKTQHLS-------NDHICYFLYQILR 155
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIA 170
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y A
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 171 PEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
PEI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 216 PEIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 246
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 23/227 (10%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHKSQCIERD---ALKNVLREMEILTTLEHPFLVN 62
G+ + +V+K K T YA K++ K + + +++ RE+ IL ++HP ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L ++++ D+ ++ +L+ GG+L + + S+ T L G+ YL +
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVY--YLHSL 133
Query: 123 HIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVAT 178
I H D+KP+NI+L + I DF +A ++ ++ GT ++APEI
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI---VN 190
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPF--DIHSNTSVKDVKAIIY 223
E LG D WS+GV + +L+ PF D T + +V A+ Y
Sbjct: 191 YEPLG--LEADMWSIGVITYILLSGASPFLGDTKQET-LANVSAVNY 234
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 35 QCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIK 94
C + L+E + +HP +V L E ++++ +L G+LR + ++
Sbjct: 48 NCTSDSVREKFLQEALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFL--QVR 104
Query: 95 FYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
+S+ ++ LYA++L AL YL++K +HRDI N+L+ + DF ++ +E
Sbjct: 105 KFSLDL--ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 162
Query: 155 ENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHS 211
++ + G P ++APE + ++ + D W GV ++EIL G +PF
Sbjct: 163 DSTXXKASKGKLPIKWMAPE-----SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 212 NTSV----KDVKAIIYSPVHYPTAWSESTK 237
N V ++ + + P PT +S TK
Sbjct: 218 NNDVIGRIENGERLPMPPNCPPTLYSLMTK 247
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 35/216 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 58 MVC--SAYDNVNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 103
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 156
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 217 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRPI 247
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLE-HPFLVNLWFCFQDEEDLFMVSDLL 80
T Q YA+K + K R V RE+E+L + H ++ L F++E+ ++V + +
Sbjct: 37 TSQEYAVKIIEKQPGHIR---SRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKM 93
Query: 81 LGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEG 140
GG + HI + F + + ++ ALD+L K I HRD+KP+NIL +
Sbjct: 94 RGGSILSHIHKRRHFNEL-----EASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPN 148
Query: 141 HA---HITDFNIATVLEENQLATSMS--------GTKPYIAPEIFLVATDEVLGYSYSVD 189
I DF++ + ++ N + +S G+ Y+APE+ ++E Y D
Sbjct: 149 QVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCD 208
Query: 190 WWSLGVTLFEILARGRPF 207
WSLGV L+ +L+ PF
Sbjct: 209 LWSLGVILYILLSGYPPF 226
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 35/216 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 46 MVC--SAYDNVNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 91
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 144
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 145 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 205 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRPI 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 35/216 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 38 MVC--SAYDNVNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 83
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 136
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 197 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRPI 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 42 MVC--SAYDNLNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 87
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 140
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 201 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 230
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 89/181 (49%), Gaps = 17/181 (9%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
+++ L E ++ TL+H LV L+ EE ++++++ + G L + D G
Sbjct: 51 SVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSD-----EGG 105
Query: 101 RNDTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQL 158
+ L F +A + Y++ K+ IHRD++ N+L+ E I DF +A V+E+N+
Sbjct: 106 KVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 165
Query: 159 ATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTS 214
T+ G K + APE ++ D WS G+ L+EI+ G+ P+ +N
Sbjct: 166 -TAREGAKFPIKWTAPEAINFGC-----FTIKSDVWSFGILLYEIVTYGKIPYPGRTNAD 219
Query: 215 V 215
V
Sbjct: 220 V 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 32/213 (15%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS +K+C D+ ++ A+K + ++ A KN RE++I+ L+H +V L
Sbjct: 31 GSFGVVYQAKLC-----DSGELVAIK-----KVLQGKAFKN--RELQIMRKLDHCNIVRL 78
Query: 64 WFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGL 114
+ F +DE L +V D + R + YS + + LY ++L
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRV-----ARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEI 173
+L Y+ + I HRDIKP N+LLD + + DF A L + S ++ Y APE+
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
ATD Y+ S+D WS G L E+L G+P
Sbjct: 194 IFGATD----YTSSIDVWSAGCVLAELLL-GQP 221
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 20/198 (10%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLE-HPFLVNLWFCFQDEEDLFMVSDLL 80
T Q YA+K + K R V RE+E+L + H ++ L F++E+ ++V + +
Sbjct: 37 TSQEYAVKIIEKQPGHIR---SRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKM 93
Query: 81 LGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEG 140
GG + HI + F + + ++ ALD+L K I HRD+KP+NIL +
Sbjct: 94 RGGSILSHIHKRRHFNEL-----EASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPN 148
Query: 141 HA---HITDFNIATVLEENQLATSMS--------GTKPYIAPEIFLVATDEVLGYSYSVD 189
I DF + + ++ N + +S G+ Y+APE+ ++E Y D
Sbjct: 149 QVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCD 208
Query: 190 WWSLGVTLFEILARGRPF 207
WSLGV L+ +L+ PF
Sbjct: 209 LWSLGVILYILLSGYPPF 226
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 8/206 (3%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEI-LTTLEHPFLVNLWFCFQDEEDLFMVSDLL 80
+ Q+ A+K + + + K +L +++I T++ PF V + E D+++ +L
Sbjct: 58 SGQIXAVKRIRAT--VNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELX 115
Query: 81 LGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK-HIIHRDIKPDNILLDEE 139
+++ K ++ D + A + AL++L +K +IHRD+KP N+L++
Sbjct: 116 DTSLDKFYKQVIDKGQTI--PEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINAL 173
Query: 140 GHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFE 199
G DF I+ L ++ +G KPY APE ++ GYS D WSLG+T E
Sbjct: 174 GQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQ-KGYSVKSDIWSLGITXIE 232
Query: 200 ILARGRPFDIHSNTSVKDVKAIIYSP 225
+ P+D T + +K ++ P
Sbjct: 233 LAILRFPYD-SWGTPFQQLKQVVEEP 257
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 36 MVC--SAYDNLNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 81
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 134
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 135 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 195 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 224
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 43 MVC--SAYDNLNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 88
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 141
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 142 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 202 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 231
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 17/181 (9%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
+++ L E ++ TL+H LV L+ EE ++++++ + G L + D G
Sbjct: 50 SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSD-----EGG 104
Query: 101 RNDTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQL 158
+ L F +A + Y++ K+ IHRD++ N+L+ E I DF +A V+E+N+
Sbjct: 105 KVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 164
Query: 159 ATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTS 214
T+ G K + APE ++ + WS G+ L+EI+ G+ P+ +N
Sbjct: 165 -TAREGAKFPIKWTAPEAINFGC-----FTIKSNVWSFGILLYEIVTYGKIPYPGRTNAD 218
Query: 215 V 215
V
Sbjct: 219 V 219
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 44 MVC--SAYDNLNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 89
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 142
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 143 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 203 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 232
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 35 MVC--SAYDNLNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 80
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 133
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 134 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 194 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 223
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 42 MVC--SAYDNLNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 87
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 140
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 201 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 230
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 16/205 (7%)
Query: 24 QMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGG 83
Q YA K ++ + RD K + RE I L+HP +V L +E +++ DL+ GG
Sbjct: 48 QEYAAKIINTKKLSARDHQK-LEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 106
Query: 84 DLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE---G 140
+L I ++YS + I ++ A+ + ++HRD+KP+N+LL +
Sbjct: 107 ELFEDIVAR-EYYSEADASHCIQ----QILEAVLHCHQMGVVHRDLKPENLLLASKLKGA 161
Query: 141 HAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFE 199
+ DF +A +E E Q +GT Y++PE+ Y VD W+ GV L+
Sbjct: 162 AVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP-----YGKPVDLWACGVILYI 216
Query: 200 ILARGRPF-DIHSNTSVKDVKAIIY 223
+L PF D + + +KA Y
Sbjct: 217 LLVGYPPFWDEDQHRLYQQIKAGAY 241
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 36 MVC--SAYDNLNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 81
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 134
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 135 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 195 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 224
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 33/223 (14%)
Query: 18 QKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVS 77
+ K T + A+K + E A +RE+ +L L+H +V L E+ L +V
Sbjct: 22 KSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79
Query: 78 DLLLGGDLRYHITQDIKFYSVGTRN----DTIHLYAFELGLALDYLKTKHIIHRDIKPDN 133
+ ++ +D+K Y N + L+ F+L L Y + ++HRD+KP N
Sbjct: 80 E---------YLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQN 130
Query: 134 ILLDEEGHAHITDFNIA------TVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYS 187
+L++E G + DF +A T +N++ T Y P+I L +TD YS
Sbjct: 131 LLINERGELKLADFGLARAKSIPTKTYDNEVVTLW-----YRPPDILLGSTD----YSTQ 181
Query: 188 VDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPT 230
+D W +G +E +A GRP + ++V++ I+ + PT
Sbjct: 182 IDMWGVGCIFYE-MATGRP--LFPGSTVEEQLHFIFRILGTPT 221
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 32/213 (15%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS +K+C D+ ++ A+K + ++ A KN RE++I+ L+H +V L
Sbjct: 31 GSFGVVYQAKLC-----DSGELVAIK-----KVLQGKAFKN--RELQIMRKLDHCNIVRL 78
Query: 64 WFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGL 114
+ F +DE L +V D + + Y + + YS + + LY ++L
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEI 173
+L Y+ + I HRDIKP N+LLD + + DF A L + S ++ Y APE+
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
ATD Y+ S+D WS G L E+L G+P
Sbjct: 194 IFGATD----YTSSIDVWSAGCVLAELLL-GQP 221
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 91/186 (48%), Gaps = 27/186 (14%)
Query: 30 YMHKSQCIERDALKNVLREMEILTTLEHPFLVNL-----WFCFQDEEDLFMVSDLLLGGD 84
+ H++ C + LRE++IL H ++ + + +D+++V DL+
Sbjct: 63 FEHQTYC------QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDL 116
Query: 85 LRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHI 144
+ TQ + ND I + +++ L Y+ + +++HRD+KP N+LL+ I
Sbjct: 117 YKLLKTQHLS-------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKI 169
Query: 145 TDFNIATVLEENQ----LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEI 200
DF +A V + + T T+ Y APEI L + GY+ S+D WS+G L E+
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK----GYTKSIDIWSVGCILAEM 225
Query: 201 LARGRP 206
L+ RP
Sbjct: 226 LS-NRP 230
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 104/213 (48%), Gaps = 32/213 (15%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS +K+C D+ ++ A+K + ++ A KN RE++I+ L+H +V L
Sbjct: 31 GSFGVVYQAKLC-----DSGELVAIK-----KVLQGKAFKN--RELQIMRKLDHCNIVRL 78
Query: 64 WFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGL 114
+ F +DE L +V D + + Y + + YS + + LY ++L
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEI 173
+L Y+ + I HRDIKP N+LLD + + DF A L + S ++ Y APE+
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
ATD Y+ S+D WS G L E+L G+P
Sbjct: 194 IFGATD----YTSSIDVWSAGCVLAELLL-GQP 221
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 23/226 (10%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQCIERD---ALKNVLREMEILTTLEHPFLVNL 63
G+ + +V+K K T YA K++ K + + +++ RE+ IL ++HP ++ L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
++++ D+ ++ +L+ GG+L + + S+ T L G+ YL +
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVY--YLHSLQ 134
Query: 124 IIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATD 179
I H D+KP+NI+L + I DF +A ++ ++ GT ++APEI
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEI---VNY 191
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPF--DIHSNTSVKDVKAIIY 223
E LG D WS+GV + +L+ PF D T + +V A+ Y
Sbjct: 192 EPLG--LEADMWSIGVITYILLSGASPFLGDTKQET-LANVSAVNY 234
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 18/198 (9%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLL 81
K A+K + + E D + E E++ L HP LV L+ ++ + +V++ +
Sbjct: 31 NKDKVAIKTIREGAMSEED----FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86
Query: 82 GGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH 141
G L ++ ++ +T+ ++ + YL+ +IHRD+ N L+ E
Sbjct: 87 HGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV 142
Query: 142 AHITDFNIATVLEENQLATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLF 198
++DF + + ++Q TS +GTK + +PE+F + YS D WS GV ++
Sbjct: 143 IKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSR-----YSSKSDVWSFGVLMW 196
Query: 199 EILARGR-PFDIHSNTSV 215
E+ + G+ P++ SN+ V
Sbjct: 197 EVFSEGKIPYENRSNSEV 214
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 23/227 (10%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHKSQCIERD---ALKNVLREMEILTTLEHPFLVN 62
G+ + +V+K K T YA K++ K + + +++ RE+ IL ++HP ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L ++++ D+ ++ +L+ GG+L + + S+ T L G+ YL +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVY--YLHSL 133
Query: 123 HIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVAT 178
I H D+KP+NI+L + I DF +A ++ ++ GT ++APEI
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI---VN 190
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPF--DIHSNTSVKDVKAIIY 223
E LG D WS+GV + +L+ PF D T + +V A+ Y
Sbjct: 191 YEPLG--LEADMWSIGVITYILLSGASPFLGDTKQET-LANVSAVNY 234
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 23/227 (10%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHKSQCIERD---ALKNVLREMEILTTLEHPFLVN 62
G+ + +V+K K T YA K++ K + + +++ RE+ IL ++HP ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L ++++ D+ ++ +L+ GG+L + + S+ T L G+ YL +
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVY--YLHSL 132
Query: 123 HIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVAT 178
I H D+KP+NI+L + I DF +A ++ ++ GT ++APEI
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI---VN 189
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPF--DIHSNTSVKDVKAIIY 223
E LG D WS+GV + +L+ PF D T + +V A+ Y
Sbjct: 190 YEPLG--LEADMWSIGVITYILLSGASPFLGDTKQET-LANVSAVNY 233
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 23/227 (10%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHKSQCIERD---ALKNVLREMEILTTLEHPFLVN 62
G+ + +V+K K T YA K++ K + + +++ RE+ IL ++HP ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L ++++ D+ ++ +L+ GG+L + + S+ T L G+ YL +
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVY--YLHSL 132
Query: 123 HIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVAT 178
I H D+KP+NI+L + I DF +A ++ ++ GT ++APEI
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI---VN 189
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPF--DIHSNTSVKDVKAIIY 223
E LG D WS+GV + +L+ PF D T + +V A+ Y
Sbjct: 190 YEPLG--LEADMWSIGVITYILLSGASPFLGDTKQET-LANVSAVNY 233
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 105/236 (44%), Gaps = 15/236 (6%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
G +KV + T +M A+K M K+ L + E+E L L H + L+ +
Sbjct: 22 GFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIEALKNLRHQHICQLYHVLET 79
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
+FMV + GG+L +I + TR + ++ A+ Y+ ++ HRD+
Sbjct: 80 ANKIFMVLEYCPGGELFDYIISQDRLSEEETR-----VVFRQIVSAVAYVHSQGYAHRDL 134
Query: 130 KPDNILLDEEGHAHITDFNIATVLEENQ--LATSMSGTKPYIAPEIFLVATDEVLGYSYS 187
KP+N+L DE + DF + + N+ + G+ Y APE L+ LG
Sbjct: 135 KPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPE--LIQGKSYLG--SE 190
Query: 188 VDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPTAWSESTKHLLSQV 243
D WS+G+ L+ ++ PFD + + K I+ P S S+ LL Q+
Sbjct: 191 ADVWSMGILLYVLMCGFLPFD--DDNVMALYKKIMRGKYDVPKWLSPSSILLLQQM 244
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 23/226 (10%)
Query: 10 GTSKVCIVQK---KDTKQMYAMKYMHKSQCIERD---ALKNVLREMEILTTLEHPFLVNL 63
G+ + +V+K K T YA K++ K + + +++ RE+ IL ++HP ++ L
Sbjct: 20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITL 79
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
++++ D+ ++ +L+ GG+L + + S+ T L G+ YL +
Sbjct: 80 HEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVY--YLHSLQ 134
Query: 124 IIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATD 179
I H D+KP+NI+L + I DF +A ++ ++ GT ++APEI
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI---VNY 191
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPF--DIHSNTSVKDVKAIIY 223
E LG D WS+GV + +L+ PF D T + +V A+ Y
Sbjct: 192 EPLG--LEADMWSIGVITYILLSGASPFLGDTKQET-LANVSAVNY 234
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHKSQCIERD---ALKNVLREMEILTTLEHPFLVN 62
G+ + +V+K K T YA K++ K + + +++ RE+ IL ++HP ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L ++++ D+ ++ +L+ GG+L + + S+ T L G+ YL +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVY--YLHSL 133
Query: 123 HIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVAT 178
I H D+KP+NI+L + I DF +A ++ ++ GT ++APEI
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI---VN 190
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPF 207
E LG D WS+GV + +L+ PF
Sbjct: 191 YEPLG--LEADMWSIGVITYILLSGASPF 217
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 21/173 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS 97
+ LRE++IL H ++ + + +D+++V DL+ + TQ +
Sbjct: 70 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS--- 126
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
ND I + +++ L Y+ + +++HRD+KP N+LL+ I DF +A V + +
Sbjct: 127 ----NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDH 182
Query: 158 ----LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
T T+ Y APEI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 183 DHTGFLTEYVATRWYRAPEIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 230
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHKSQCIERD---ALKNVLREMEILTTLEHPFLVN 62
G+ + +V+K K T YA K++ K + + +++ RE+ IL ++HP ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L ++++ D+ ++ +L+ GG+L + + S+ T L G+ YL +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVY--YLHSL 133
Query: 123 HIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVAT 178
I H D+KP+NI+L + I DF +A ++ ++ GT ++APEI
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI---VN 190
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPF 207
E LG D WS+GV + +L+ PF
Sbjct: 191 YEPLG--LEADMWSIGVITYILLSGASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHKSQCIERD---ALKNVLREMEILTTLEHPFLVN 62
G+ + +V+K K T YA K++ K + + +++ RE+ IL ++HP ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L ++++ D+ ++ +L+ GG+L + + S+ T L G+ YL +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVY--YLHSL 133
Query: 123 HIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVAT 178
I H D+KP+NI+L + I DF +A ++ ++ GT ++APEI
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI---VN 190
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPF 207
E LG D WS+GV + +L+ PF
Sbjct: 191 YEPLG--LEADMWSIGVITYILLSGASPF 217
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + H+ QD+K +
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE---------HVHQDLKTFMDASALT 97
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T T Y APEI L YS +VD WSLG E++ R
Sbjct: 158 TYTHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 199
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHKSQCIERD---ALKNVLREMEILTTLEHPFLVN 62
G+ + +V+K K T YA K++ K + + +++ RE+ IL ++HP ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L ++++ D+ ++ +L+ GG+L + + S+ T L G+ YL +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVY--YLHSL 133
Query: 123 HIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVAT 178
I H D+KP+NI+L + I DF +A ++ ++ GT ++APEI
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI---VN 190
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPF 207
E LG D WS+GV + +L+ PF
Sbjct: 191 YEPLG--LEADMWSIGVITYILLSGASPF 217
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHKSQCIERD---ALKNVLREMEILTTLEHPFLVN 62
G+ + +V+K K T YA K++ K + + +++ RE+ IL ++HP ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L ++++ D+ ++ +L+ GG+L + + S+ T L G+ YL +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVY--YLHSL 133
Query: 123 HIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVAT 178
I H D+KP+NI+L + I DF +A ++ ++ GT ++APEI
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI---VN 190
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPF 207
E LG D WS+GV + +L+ PF
Sbjct: 191 YEPLG--LEADMWSIGVITYILLSGASPF 217
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 35 QCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIK 94
C + L+E + +HP +V L E ++++ +L G+LR + ++
Sbjct: 48 NCTSDSVREKFLQEALTMRQFDHPHIVKL-IGVITENPVWIIMELCTLGELRSFL--QVR 104
Query: 95 FYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
+S+ ++ LYA++L AL YL++K +HRDI N+L+ + DF ++ +E
Sbjct: 105 KFSLDL--ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME 162
Query: 155 ENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHS 211
++ + G P ++APE + ++ + D W GV ++EIL G +PF
Sbjct: 163 DSTYYKASKGKLPIKWMAPE-----SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 217
Query: 212 NTSV----KDVKAIIYSPVHYPTAWSESTK 237
N V ++ + + P PT +S TK
Sbjct: 218 NNDVIGRIENGERLPMPPNCPPTLYSLMTK 247
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 40/222 (18%)
Query: 41 ALKNVLREMEILTTLEHPFLV---NLWFCFQDEEDLFMVS-DLLLGGDLRYHITQDIKFY 96
A + V+RE++ L LEHP +V N W E L S + L ++ +++K +
Sbjct: 46 AREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDW 105
Query: 97 SVGT-----RNDTIHLYAF-ELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIA 150
G R ++ L+ F ++ A+++L +K ++HRD+KP NI + + DF +
Sbjct: 106 MNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 165
Query: 151 TVL----EENQLATSMS---------GTKPYIAPEIFLVATDEVLGYSYS--VDWWSLGV 195
T + EE + T M GTK Y++PE ++ G SYS VD +SLG+
Sbjct: 166 TAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPE-------QIHGNSYSHKVDIFSLGL 218
Query: 196 TLFEILARGRPFDIHSN--TSVKDVKAIIYSPV---HYPTAW 232
LFE+L PF ++ DV+ + + P+ YP +
Sbjct: 219 ILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEY 257
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHKSQCIERD---ALKNVLREMEILTTLEHPFLVN 62
G+ + +V+K K T YA K++ K + + +++ RE+ IL ++HP ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L ++++ D+ ++ +L+ GG+L + + S+ T L G+ YL +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVY--YLHSL 133
Query: 123 HIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVAT 178
I H D+KP+NI+L + I DF +A ++ ++ GT ++APEI
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI---VN 190
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPF 207
E LG D WS+GV + +L+ PF
Sbjct: 191 YEPLG--LEADMWSIGVITYILLSGASPF 217
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 42 MVC--SAYDNLNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 87
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 140
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSM----SGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 201 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 230
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 43 MVC--SAYDNLNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 88
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + TQ + ND I + +++
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLS-------NDHICYFLYQILRG 141
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSM----SGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 142 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 202 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 231
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLL 81
K A+K + + E D + E E++ L HP LV L+ ++ + +V + +
Sbjct: 30 NKDKVAIKTIREGAMSEED----FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 85
Query: 82 GGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH 141
G L ++ ++ +T+ ++ + YL+ +IHRD+ N L+ E
Sbjct: 86 HGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQV 141
Query: 142 AHITDFNIATVLEENQLATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLF 198
++DF + + ++Q TS +GTK + +PE+F + YS D WS GV ++
Sbjct: 142 IKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSR-----YSSKSDVWSFGVLMW 195
Query: 199 EILARGR-PFDIHSNTSV 215
E+ + G+ P++ SN+ V
Sbjct: 196 EVFSEGKIPYENRSNSEV 213
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 18/207 (8%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS F G ++ +++ K TK++ A+KY+ + I+ +NV RE+ +L HP +V
Sbjct: 29 GSGNF-GVAR--LMRDKLTKELVAVKYIERGAAID----ENVQREIINHRSLRHPNIVRF 81
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
L ++ + GG+L I +F D + +L + Y +
Sbjct: 82 KEVILTPTHLAIIMEYASGGELYERICNAGRF-----SEDEARFFFQQLLSGVSYCHSMQ 136
Query: 124 IIHRDIKPDNILLDEEGHAH--ITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
I HRD+K +N LLD I DF + + S GT YIAPE+ L E
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL--RQEY 194
Query: 182 LGYSYSVDWWSLGVTLFEILARGRPFD 208
G D WS GVTL+ +L PF+
Sbjct: 195 DG--KIADVWSCGVTLYVMLVGAYPFE 219
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA-TSMSGTKPYIAPEI 173
LDYL ++ IHRDIK N+LL E+G + DF +A L + Q+ + GT ++APE+
Sbjct: 132 GLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEV 191
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYP 229
+ Y D WSLG+T E LA+G P N+ + ++ + P + P
Sbjct: 192 I-----QQSAYDSKADIWSLGITAIE-LAKGEP----PNSDMHPMRVLFLIPKNNP 237
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C + L+E + +HP +V L E ++++ +L G+LR + ++
Sbjct: 429 CTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFL--QVRK 485
Query: 96 YSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE 155
+S+ ++ LYA++L AL YL++K +HRDI N+L+ + DF ++ +E+
Sbjct: 486 FSLDL--ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543
Query: 156 NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSN 212
+ + G P ++APE + ++ + D W GV ++EIL G +PF N
Sbjct: 544 STYYKASKGKLPIKWMAPE-----SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 598
Query: 213 TSV----KDVKAIIYSPVHYPTAWSESTK 237
V ++ + + P PT +S TK
Sbjct: 599 NDVIGRIENGERLPMPPNCPPTLYSLMTK 627
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 19/169 (11%)
Query: 44 NVLREMEILTTLE---HPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFY--- 96
+ +RE+ +L LE HP +V L C D + L+ H+ QD++ Y
Sbjct: 57 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVF-----EHVDQDLRTYLDK 111
Query: 97 --SVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
G +TI + LD+L I+HRD+KP+NIL+ G + DF +A +
Sbjct: 112 APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS 171
Query: 155 ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T + T Y APE+ L +T Y+ VD WS+G E+ R
Sbjct: 172 YQMALTPVVVTLWYRAPEVLLQST-----YATPVDMWSVGCIFAEMFRR 215
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLL 81
K A+K + + E D + E E++ L HP LV L+ ++ + +V + +
Sbjct: 30 NKDKVAIKTIREGAMSEED----FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 85
Query: 82 GGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH 141
G L ++ ++ +T+ ++ + YL+ +IHRD+ N L+ E
Sbjct: 86 HGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV 141
Query: 142 AHITDFNIATVLEENQLATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLF 198
++DF + + ++Q TS +GTK + +PE+F + YS D WS GV ++
Sbjct: 142 IKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSR-----YSSKSDVWSFGVLMW 195
Query: 199 EILARGR-PFDIHSNTSV 215
E+ + G+ P++ SN+ V
Sbjct: 196 EVFSEGKIPYENRSNSEV 213
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 101/215 (46%), Gaps = 35/215 (16%)
Query: 1 MFCGSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFL 60
M C S + +KV + KK + + H++ C + LRE++IL H +
Sbjct: 42 MVC--SAYDNLNKVRVAIKKISP------FEHQTYC------QRTLREIKILLRFRHENI 87
Query: 61 VNL-----WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
+ + + +D+++V DL+ + Q + ND I + +++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLS-------NDHICYFLYQILRG 140
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ----LATSMSGTKPYIAP 171
L Y+ + +++HRD+KP N+LL+ I DF +A V + + T T+ Y AP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
EI L + GY+ S+D WS+G L E+L+ RP
Sbjct: 201 EIMLNSK----GYTKSIDIWSVGCILAEMLS-NRP 230
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 15/208 (7%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
T+ V + K T ++A+K + + ++ +RE E+L L H +V L F ++
Sbjct: 21 ATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKNIVKL-FAIEE 77
Query: 70 EEDL---FMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIH 126
E ++ + G L + + Y + I L G+ ++L+ I+H
Sbjct: 78 ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM--NHLRENGIVH 135
Query: 127 RDIKPDNIL--LDEEGHA--HITDFNIATVLEENQLATSMSGTKPYIAPEIF---LVATD 179
R+IKP NI+ + E+G + +TDF A LE+++ S+ GT+ Y+ P+++ ++ D
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKD 195
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPF 207
Y +VD WS+GVT + PF
Sbjct: 196 HQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLL 81
K A+K + + E D + E E++ L HP LV L+ ++ + +V + +
Sbjct: 33 NKDKVAIKTIREGAMSEED----FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88
Query: 82 GGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH 141
G L ++ ++ +T+ ++ + YL+ +IHRD+ N L+ E
Sbjct: 89 HGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV 144
Query: 142 AHITDFNIATVLEENQLATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLF 198
++DF + + ++Q TS +GTK + +PE+F + YS D WS GV ++
Sbjct: 145 IKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSR-----YSSKSDVWSFGVLMW 198
Query: 199 EILARGR-PFDIHSNTSV 215
E+ + G+ P++ SN+ V
Sbjct: 199 EVFSEGKIPYENRSNSEV 216
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 90/186 (48%), Gaps = 15/186 (8%)
Query: 35 QCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIK 94
Q E+ + ++RE +I+ L++P++V L Q E L +V ++ GG L + +
Sbjct: 47 QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKRE 105
Query: 95 FYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL- 153
V + +H ++ + + YL+ K+ +HRD+ N+LL +A I+DF ++ L
Sbjct: 106 EIPVSNVAELLH----QVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161
Query: 154 -EENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDI 209
+++ +G P + APE +S D WS GVT++E L+ G +P+
Sbjct: 162 ADDSYYTARSAGKWPLKWYAPECI-----NFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 216
Query: 210 HSNTSV 215
V
Sbjct: 217 MKGPEV 222
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLL 81
K A+K + + E D + E E++ L HP LV L+ ++ + +V + +
Sbjct: 28 NKDKVAIKTIREGAMSEED----FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 83
Query: 82 GGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH 141
G L ++ ++ +T+ ++ + YL+ +IHRD+ N L+ E
Sbjct: 84 HGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQV 139
Query: 142 AHITDFNIATVLEENQLATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLF 198
++DF + + ++Q TS +GTK + +PE+F + YS D WS GV ++
Sbjct: 140 IKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSR-----YSSKSDVWSFGVLMW 193
Query: 199 EILARGR-PFDIHSNTSV 215
E+ + G+ P++ SN+ V
Sbjct: 194 EVFSEGKIPYENRSNSEV 211
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 19/165 (11%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFY 96
+ RE+ +L L+H ++ L F +D ++++V+ L+ G DL +
Sbjct: 72 RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVK------ 124
Query: 97 SVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
S ++ + ++L L Y+ + IIHRD+KP N+ ++E+ I DF +A +E
Sbjct: 125 SQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE 184
Query: 157 QLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T T+ Y APEI L + Y+ +VD WS+G + E+L
Sbjct: 185 M--TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELL 223
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 32/213 (15%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS +K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L
Sbjct: 31 GSFGVVYQAKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRL 78
Query: 64 WFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGL 114
+ F +DE L +V D + + Y + + YS + + LY ++L
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEI 173
+L Y+ + I HRDIKP N+LLD + + DF A L + S ++ Y APE+
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
ATD Y+ S+D WS G L E+L G+P
Sbjct: 194 IFGATD----YTSSIDVWSAGCVLAELLL-GQP 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 32/213 (15%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS +K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L
Sbjct: 35 GSFGVVYQAKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRL 82
Query: 64 WFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGL 114
+ F +DE L +V D + + Y + + YS + + LY ++L
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEI 173
+L Y+ + I HRDIKP N+LLD + + DF A L + S ++ Y APE+
Sbjct: 138 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 197
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
ATD Y+ S+D WS G L E+L G+P
Sbjct: 198 IFGATD----YTSSIDVWSAGCVLAELLL-GQP 225
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 9 CGTSKVCIVQK---KDTKQMYAMKYMHKSQCIERD---ALKNVLREMEILTTLEHPFLVN 62
G+ +V+K K T YA K++ K + + +++ RE+ IL ++HP ++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 63 LWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTK 122
L ++++ D+ ++ +L+ GG+L + + S+ T L G+ YL +
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVY--YLHSL 133
Query: 123 HIIHRDIKPDNILLDEEG----HAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVAT 178
I H D+KP+NI+L + I DF +A ++ ++ GT ++APEI
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI---VN 190
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRPF 207
E LG D WS+GV + +L+ PF
Sbjct: 191 YEPLG--LEADMWSIGVITYILLSGASPF 217
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 32/213 (15%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS +K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L
Sbjct: 31 GSFGVVYQAKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRL 78
Query: 64 WFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGL 114
+ F +DE L +V D + + Y + + YS + + LY ++L
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEI 173
+L Y+ + I HRDIKP N+LLD + + DF A L + S ++ Y APE+
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
ATD Y+ S+D WS G L E+L G+P
Sbjct: 194 IFGATD----YTSSIDVWSAGCVLAELLL-GQP 221
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 32/213 (15%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS +K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L
Sbjct: 39 GSFGVVYQAKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRL 86
Query: 64 WFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGL 114
+ F +DE L +V D + + Y + + YS + + LY ++L
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEI 173
+L Y+ + I HRDIKP N+LLD + + DF A L + S ++ Y APE+
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 201
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
ATD Y+ S+D WS G L E+L G+P
Sbjct: 202 IFGATD----YTSSIDVWSAGCVLAELLL-GQP 229
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 32/213 (15%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS +K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L
Sbjct: 43 GSFGVVYQAKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRL 90
Query: 64 WFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGL 114
+ F +DE L +V D + + Y + + YS + + LY ++L
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEI 173
+L Y+ + I HRDIKP N+LLD + + DF A L + S ++ Y APE+
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
ATD Y+ S+D WS G L E+L G+P
Sbjct: 206 IFGATD----YTSSIDVWSAGCVLAELLL-GQP 233
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 32/213 (15%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS +K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L
Sbjct: 32 GSFGVVYQAKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRL 79
Query: 64 WFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGL 114
+ F +DE L +V D + + Y + + YS + + LY ++L
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEI 173
+L Y+ + I HRDIKP N+LLD + + DF A L + S ++ Y APE+
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 194
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
ATD Y+ S+D WS G L E+L G+P
Sbjct: 195 IFGATD----YTSSIDVWSAGCVLAELLL-GQP 222
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 17/209 (8%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C + L+E + +HP +V L E ++++ +L G+LR + ++
Sbjct: 429 CTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFL--QVRK 485
Query: 96 YSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE 155
+S+ ++ LYA++L AL YL++K +HRDI N+L+ + DF ++ +E+
Sbjct: 486 FSLDL--ASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMED 543
Query: 156 NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSN 212
+ + G P ++APE + ++ + D W GV ++EIL G +PF N
Sbjct: 544 STYYKASKGKLPIKWMAPE-----SINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN 598
Query: 213 TSV----KDVKAIIYSPVHYPTAWSESTK 237
V ++ + + P PT +S TK
Sbjct: 599 NDVIGRIENGERLPMPPNCPPTLYSLMTK 627
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 32/213 (15%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS +K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L
Sbjct: 50 GSFGVVYQAKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRL 97
Query: 64 WFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGL 114
+ F +DE L +V D + + Y + + YS + + LY ++L
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEI 173
+L Y+ + I HRDIKP N+LLD + + DF A L + S ++ Y APE+
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 212
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
ATD Y+ S+D WS G L E+L G+P
Sbjct: 213 IFGATD----YTSSIDVWSAGCVLAELLL-GQP 240
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 32/213 (15%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS +K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L
Sbjct: 31 GSFGVVYQAKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRL 78
Query: 64 WFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGL 114
+ F +DE L +V D + + Y + + YS + + LY ++L
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEI 173
+L Y+ + I HRDIKP N+LLD + + DF A L + S ++ Y APE+
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
ATD Y+ S+D WS G L E+L G+P
Sbjct: 194 IFGATD----YTSSIDVWSAGCVLAELLL-GQP 221
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 32/213 (15%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS +K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L
Sbjct: 43 GSFGVVYQAKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRL 90
Query: 64 WFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGL 114
+ F +DE L +V D + + Y + + YS + + LY ++L
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEI 173
+L Y+ + I HRDIKP N+LLD + + DF A L + S ++ Y APE+
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
ATD Y+ S+D WS G L E+L G+P
Sbjct: 206 IFGATD----YTSSIDVWSAGCVLAELLL-GQP 233
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + H+ QD+K +
Sbjct: 51 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE---------HVDQDLKKFMDASALT 101
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 162 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 203
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 27/187 (14%)
Query: 30 YMHKSQCIERDALKNVLREMEILTTLEHPFLVNLW-----FCFQDEEDLFMVSDLLLGGD 84
+ H++ C + LRE++IL H ++ + + D+++V DL+
Sbjct: 79 FEHQTYC------QRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDL 132
Query: 85 LRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHI 144
+ +Q + ND I + +++ L Y+ + +++HRD+KP N+L++ I
Sbjct: 133 YKLLKSQQLS-------NDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKI 185
Query: 145 TDFNIATVLEENQ----LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEI 200
DF +A + + T T+ Y APEI L + GY+ S+D WS+G L E+
Sbjct: 186 CDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSK----GYTKSIDIWSVGCILAEM 241
Query: 201 LARGRPF 207
L+ RP
Sbjct: 242 LS-NRPI 247
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 74/154 (48%), Gaps = 11/154 (7%)
Query: 52 LTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI-TQDIKFYSVGTRNDTIHLYAF 110
L+ HP LV+L + ++ ++ + G+L+ H+ D+ S+
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 111 ELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIA---TVLEENQLATSMSGTKP 167
GL YL T+ IIHRD+K NILLDE ITDF I+ T L++ L + GT
Sbjct: 149 ARGL--HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLG 206
Query: 168 YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
YI PE F+ + D +S GV LFE+L
Sbjct: 207 YIDPEYFIKGR-----LTEKSDVYSFGVVLFEVL 235
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
+E + + L HP LV + E +++V++ + G L ++ K G +
Sbjct: 51 FQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGK----GLEPSQL 106
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
+++ + +L++ IHRD+ N L+D + ++DF + + ++Q +S+
Sbjct: 107 LEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTK 166
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
P + APE+F YS D W+ G+ ++E+ + G+ P+D+++N+ V
Sbjct: 167 FPVKWSAPEVF-----HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV 214
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 32/205 (15%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF---- 67
+K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L + F
Sbjct: 73 AKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSG 120
Query: 68 --QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGLALDYLKTK 122
+DE L +V D + + Y + + YS + + LY ++L +L Y+ +
Sbjct: 121 EKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 123 HIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
I HRDIKP N+LLD + + DF A L + S ++ Y APE+ ATD
Sbjct: 176 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATD-- 233
Query: 182 LGYSYSVDWWSLGVTLFEILARGRP 206
Y+ S+D WS G L E+L G+P
Sbjct: 234 --YTSSIDVWSAGCVLAELLL-GQP 255
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 22 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 77
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + + R D I L Y ++ ++
Sbjct: 78 KYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKE------RIDHIKLLQYTSQICKGME 131
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
YL TK IHRD+ NIL++ E I DF + VL +++ + +P +P IF A
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK--EPGESP-IFWYA 188
Query: 178 TDEVLGYSYSV--DWWSLGVTLFEILA 202
+ + +SV D WS GV L+E+
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 32/213 (15%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS +K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L
Sbjct: 44 GSFGVVYQAKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRL 91
Query: 64 WFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGL 114
+ F +DE L +V D + + Y + + YS + + LY ++L
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEI 173
+L Y+ + I HRDIKP N+LLD + + DF A L + S ++ Y APE+
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 206
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
ATD Y+ S+D WS G L E+L G+P
Sbjct: 207 IFGATD----YTSSIDVWSAGCVLAELLL-GQP 234
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 88/176 (50%), Gaps = 14/176 (7%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRND 103
+ + E E++ L HP LV L+ ++ + +V + + G L ++ ++ +
Sbjct: 68 DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA----E 123
Query: 104 TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
T+ ++ + YL+ +IHRD+ N L+ E ++DF + + ++Q TS +
Sbjct: 124 TLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSST 182
Query: 164 GTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
GTK + +PE+F + YS D WS GV ++E+ + G+ P++ SN+ V
Sbjct: 183 GTKFPVKWASPEVFSFSR-----YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV 233
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 32/213 (15%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS +K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L
Sbjct: 36 GSFGVVYQAKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRL 83
Query: 64 WFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGL 114
+ F +DE L +V D + + Y + + YS + + LY ++L
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEI 173
+L Y+ + I HRDIKP N+LLD + + DF A L + S ++ Y APE+
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 198
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
ATD Y+ S+D WS G L E+L G+P
Sbjct: 199 IFGATD----YTSSIDVWSAGCVLAELLL-GQP 226
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 98
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 99 GIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T T Y APEI L YS +VD WSLG E++ R
Sbjct: 159 TYTHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 200
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 32/205 (15%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF---- 67
+K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L + F
Sbjct: 67 AKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSG 114
Query: 68 --QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGLALDYLKTK 122
+DE L +V D + + Y + + YS + + LY ++L +L Y+ +
Sbjct: 115 EKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 169
Query: 123 HIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
I HRDIKP N+LLD + + DF A L + S ++ Y APE+ ATD
Sbjct: 170 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD-- 227
Query: 182 LGYSYSVDWWSLGVTLFEILARGRP 206
Y+ S+D WS G L E+L G+P
Sbjct: 228 --YTSSIDVWSAGCVLAELLL-GQP 249
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 32/205 (15%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF---- 67
+K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L + F
Sbjct: 73 AKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSG 120
Query: 68 --QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGLALDYLKTK 122
+DE L +V D + + Y + + YS + + LY ++L +L Y+ +
Sbjct: 121 EKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175
Query: 123 HIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
I HRDIKP N+LLD + + DF A L + S ++ Y APE+ ATD
Sbjct: 176 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD-- 233
Query: 182 LGYSYSVDWWSLGVTLFEILARGRP 206
Y+ S+D WS G L E+L G+P
Sbjct: 234 --YTSSIDVWSAGCVLAELLL-GQP 255
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 32/205 (15%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF---- 67
+K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L + F
Sbjct: 77 AKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSG 124
Query: 68 --QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGLALDYLKTK 122
+DE L +V D + + Y + + YS + + LY ++L +L Y+ +
Sbjct: 125 EKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 179
Query: 123 HIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
I HRDIKP N+LLD + + DF A L + S ++ Y APE+ ATD
Sbjct: 180 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD-- 237
Query: 182 LGYSYSVDWWSLGVTLFEILARGRP 206
Y+ S+D WS G L E+L G+P
Sbjct: 238 --YTSSIDVWSAGCVLAELLL-GQP 259
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 32/205 (15%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF---- 67
+K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L + F
Sbjct: 118 AKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSG 165
Query: 68 --QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGLALDYLKTK 122
+DE L +V D + + Y + + YS + + LY ++L +L Y+ +
Sbjct: 166 EKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 220
Query: 123 HIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
I HRDIKP N+LLD + + DF A L + S ++ Y APE+ ATD
Sbjct: 221 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD-- 278
Query: 182 LGYSYSVDWWSLGVTLFEILARGRP 206
Y+ S+D WS G L E+L G+P
Sbjct: 279 --YTSSIDVWSAGCVLAELLL-GQP 300
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 32/205 (15%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF---- 67
+K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L + F
Sbjct: 75 AKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRLRYFFYSSG 122
Query: 68 --QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGLALDYLKTK 122
+DE L +V D + + Y + + YS + + LY ++L +L Y+ +
Sbjct: 123 EKKDEVYLNLVLDYV--PETVYRVA---RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 177
Query: 123 HIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
I HRDIKP N+LLD + + DF A L + S ++ Y APE+ ATD
Sbjct: 178 GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATD-- 235
Query: 182 LGYSYSVDWWSLGVTLFEILARGRP 206
Y+ S+D WS G L E+L G+P
Sbjct: 236 --YTSSIDVWSAGCVLAELLL-GQP 257
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 101/217 (46%), Gaps = 46/217 (21%)
Query: 20 KDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLE-HPFLVNLWFCFQ--DEEDLFMV 76
+ T ++ A+K + + DA + RE+ ILT L H +VNL + ++ D+++V
Sbjct: 31 RRTGEVVAVKKIFDAFQNSTDAQR-TFREIMILTELSGHENIVNLLNVLRADNDRDVYLV 89
Query: 77 SDLL---LGGDLRYHITQDI-KFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPD 132
D + L +R +I + + K Y V ++L + YL + ++HRD+KP
Sbjct: 90 FDYMETDLHAVIRANILEPVHKQYVV-----------YQLIKVIKYLHSGGLLHRDMKPS 138
Query: 133 NILLDEEGHAHITDF--------------NIATVLEEN--------QLATSMSGTKPYIA 170
NILL+ E H + DF NI + EN + T T+ Y A
Sbjct: 139 NILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRA 198
Query: 171 PEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
PEI L +T Y+ +D WSLG L EIL G+P
Sbjct: 199 PEILLGST----KYTKGIDMWSLGCILGEILC-GKPI 230
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 49 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 99
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 159
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T T Y APEI L YS +VD WSLG E++ R
Sbjct: 160 TYTHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 98
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T T Y APEI L YS +VD WSLG E++ R
Sbjct: 159 TYTHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 200
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 4 GSSKFCGTSKVCIVQKKD-TKQMYAMKYMHKSQC--IERDALKNVLREMEILTTLEHPFL 60
G F S C D T +M A+K + K+ C R K +E++IL TL H +
Sbjct: 23 GEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQHRSGWK---QEIDILRTLYHEHI 78
Query: 61 VNLWFCFQD--EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDY 118
+ C +D E+ L +V + + G LR ++ + +S+G + L+A ++ + Y
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR----HSIGLAQ--LLLFAQQICEGMAY 132
Query: 119 LKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ--LATSMSGTKP--YIAPEIF 174
L ++H IHR++ N+LLD + I DF +A + E G P + APE
Sbjct: 133 LHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 175 LVATDEVLGYSYSVDWWSLGVTLFEIL 201
+ + Y+ D WS GVTL+E+L
Sbjct: 193 -----KEYKFYYASDVWSFGVTLYELL 214
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 17 VQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMV 76
+ K T ++ A+K + E +RE+ +L L HP +V L E L++V
Sbjct: 29 ARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 87
Query: 77 SDLLLGGDLRYHITQDIKFYS-----VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+ L QD+K + G I Y F+L L + + ++HRD+KP
Sbjct: 88 FEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 138
Query: 132 DNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
N+L++ EG + DF +A + T T Y APEI L YS +VD
Sbjct: 139 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY----YSTAVDI 194
Query: 191 WSLGVTLFEILAR 203
WSLG E++ R
Sbjct: 195 WSLGCIFAEMVTR 207
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 98
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T T Y APEI L YS +VD WSLG E++ R
Sbjct: 159 TYTHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 97
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T T Y APEI L YS +VD WSLG E++ R
Sbjct: 158 TYTHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 97
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T T Y APEI L YS +VD WSLG E++ R
Sbjct: 158 TYTHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 199
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 98
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T T Y APEI L YS +VD WSLG E++ R
Sbjct: 159 TYTHEVVTLWYRAPEILLGXK----YYSTAVDIWSLGCIFAEMVTR 200
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 19/189 (10%)
Query: 33 KSQCIERD--ALKNVL-------REMEILTTLEHPFLVNL---WFCFQDEED-LFMVSDL 79
+++ +E D A+K VL RE++I+ ++HP +V+L ++ D++D +F+ L
Sbjct: 58 QAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117
Query: 80 LLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE 139
+ Y ++ I LY ++L +L Y+ + I HRDIKP N+LLD
Sbjct: 118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPP 177
Query: 140 -GHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLF 198
G + DF A +L + S ++ Y APE+ AT+ Y+ ++D WS G +
Sbjct: 178 SGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATN----YTTNIDIWSTGCVMA 233
Query: 199 EILARGRPF 207
E++ +G+P
Sbjct: 234 ELM-QGQPL 241
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 98
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T T Y APEI L YS +VD WSLG E++ R
Sbjct: 159 TYTHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 200
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 97
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T T Y APEI L YS +VD WSLG E++ R
Sbjct: 158 TYTHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 199
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 52 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 102
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 103 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 162
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T T Y APEI L YS +VD WSLG E++ R
Sbjct: 163 TYTHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 204
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 26 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 81
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + + R D I L Y ++ ++
Sbjct: 82 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGME 135
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
YL TK IHRD+ NIL++ E I DF + VL +++ + +P +P IF A
Sbjct: 136 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK--EPGESP-IFWYA 192
Query: 178 TDEVLGYSYSV--DWWSLGVTLFEILA 202
+ + +SV D WS GV L+E+
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFY 96
+ RE+ +L L+H ++ L F +D ++++V+ L+ G DL +K
Sbjct: 72 RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADL----NNIVKCQ 126
Query: 97 SVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
++ ++ + ++L L Y+ + IIHRD+KP N+ ++E+ I DF +A +E
Sbjct: 127 ALS--DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE 184
Query: 157 QLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T T+ Y APEI L + Y+ +VD WS+G + E+L
Sbjct: 185 M--TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELL 223
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS F G ++ +++ K + ++ A+KY+ + + I+ +NV RE+ +L HP +V
Sbjct: 27 GSGNF-GVAR--LMRDKQSNELVAVKYIERGEKID----ENVKREIINHRSLRHPNIVRF 79
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
L +V + GG+L I +F D + +L + Y
Sbjct: 80 KEVILTPTHLAIVMEYASGGELFERICNAGRF-----SEDEARFFFQQLISGVSYCHAMQ 134
Query: 124 IIHRDIKPDNILLDEEGHAH--ITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
+ HRD+K +N LLD I DF + + S GT YIAPE+ L
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE--- 191
Query: 182 LGYSYSV-DWWSLGVTLFEILARGRPFD 208
Y V D WS GVTL+ +L PF+
Sbjct: 192 --YDGKVADVWSCGVTLYVMLVGAYPFE 217
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 44 NVLREMEILTTLE---HPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFY--- 96
+ +RE+ +L LE HP +V L C D + L+ H+ QD++ Y
Sbjct: 49 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVF-----EHVDQDLRTYLDK 103
Query: 97 --SVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
G +TI + LD+L I+HRD+KP+NIL+ G + DF +A +
Sbjct: 104 APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS 163
Query: 155 ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
+ T Y APE+ L +T Y+ VD WS+G E+ R
Sbjct: 164 YQMALAPVVVTLWYRAPEVLLQST-----YATPVDMWSVGCIFAEMFRR 207
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 21/207 (10%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 22 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 77
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + R D I L Y ++ ++
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ------AHAERIDHIKLLQYTSQICKGME 131
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
YL TK IHRD+ NIL++ E I DF + VL +++ + +P +P IF A
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK--EPGESP-IFWYA 188
Query: 178 TDEVLGYSYSV--DWWSLGVTLFEILA 202
+ + +SV D WS GV L+E+
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 17 VQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMV 76
+ K T ++ A+K + E +RE+ +L L HP +V L E L++V
Sbjct: 29 ARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 87
Query: 77 SDLLLGGDLRYHITQDIKFYS-----VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+ L QD+K + G I Y F+L L + + ++HRD+KP
Sbjct: 88 FEFL---------HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 138
Query: 132 DNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
N+L++ EG + DF +A + T T Y APEI L YS +VD
Sbjct: 139 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKY----YSTAVDI 194
Query: 191 WSLGVTLFEILAR 203
WSLG E++ R
Sbjct: 195 WSLGCIFAEMVTR 207
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 52 LTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI-TQDIKFYSVGTRNDTIHLYAF 110
L+ HP LV+L + ++ ++ + G+L+ H+ D+ S+
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 111 ELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIA---TVLEENQLATSMSGTKP 167
GL YL T+ IIHRD+K NILLDE ITDF I+ T L + L + GT
Sbjct: 149 ARGL--HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLG 206
Query: 168 YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
YI PE F+ + D +S GV LFE+L
Sbjct: 207 YIDPEYFIKGR-----LTEKSDVYSFGVVLFEVL 235
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 37 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 92
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + + R D I L Y ++ ++
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGME 146
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
YL TK IHRD+ NIL++ E I DF + VL +++ + +P +P IF A
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK--EPGESP-IFWYA 203
Query: 178 TDEVLGYSYSV--DWWSLGVTLFEILA 202
+ + +SV D WS GV L+E+
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 37 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 92
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + + R D I L Y ++ ++
Sbjct: 93 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGME 146
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
YL TK IHRD+ NIL++ E I DF + VL +++ + +P +P IF A
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK--EPGESP-IFWYA 203
Query: 178 TDEVLGYSYSV--DWWSLGVTLFEILA 202
+ + +SV D WS GV L+E+
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDE 70
T+ V + K T ++A+K + + ++ +RE E+L L H +V L F ++E
Sbjct: 22 TANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKNIVKL-FAIEEE 78
Query: 71 EDL---FMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHR 127
++ + G L + + Y + I L G+ ++L+ I+HR
Sbjct: 79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM--NHLRENGIVHR 136
Query: 128 DIKPDNIL--LDEEGHA--HITDFNIATVLEENQLATSMSGTKPYIAPEIF---LVATDE 180
+IKP NI+ + E+G + +TDF A LE+++ + GT+ Y+ P+++ ++ D
Sbjct: 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDH 196
Query: 181 VLGYSYSVDWWSLGVTLFEILARGRPF 207
Y +VD WS+GVT + PF
Sbjct: 197 QKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 19 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 74
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + + R D I L Y ++ ++
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGME 128
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
YL TK IHRD+ NIL++ E I DF + VL +++ + +P +P IF A
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK--EPGESP-IFWYA 185
Query: 178 TDEVLGYSYSV--DWWSLGVTLFEILA 202
+ + +SV D WS GV L+E+
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 50 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 105
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + + R D I L Y ++ ++
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGME 159
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
YL TK IHRD+ NIL++ E I DF + VL +++ + +P +P IF A
Sbjct: 160 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK--EPGESP-IFWYA 216
Query: 178 TDEVLGYSYSV--DWWSLGVTLFEILA 202
+ + +SV D WS GV L+E+
Sbjct: 217 PESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 24 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 79
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + + R D I L Y ++ ++
Sbjct: 80 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGME 133
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
YL TK IHRD+ NIL++ E I DF + VL +++ + +P +P IF A
Sbjct: 134 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK--EPGESP-IFWYA 190
Query: 178 TDEVLGYSYSV--DWWSLGVTLFEILA 202
+ + +SV D WS GV L+E+
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 4 GSSKFCGTSKVCIVQKKD-TKQMYAMKYMHKSQC--IERDALKNVLREMEILTTLEHPFL 60
G F S C D T +M A+K + K+ C R K +E++IL TL H +
Sbjct: 23 GEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQHRSGWK---QEIDILRTLYHEHI 78
Query: 61 VNLWFCFQD--EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDY 118
+ C +D E+ L +V + + G LR ++ + +S+G + L+A ++ + Y
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR----HSIGLAQ--LLLFAQQICEGMAY 132
Query: 119 LKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ--LATSMSGTKP--YIAPEIF 174
L +H IHR++ N+LLD + I DF +A + E G P + APE
Sbjct: 133 LHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 175 LVATDEVLGYSYSVDWWSLGVTLFEIL 201
+ + Y+ D WS GVTL+E+L
Sbjct: 193 -----KEYKFYYASDVWSFGVTLYELL 214
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 15/188 (7%)
Query: 18 QKKDTKQMYAMKYMHKSQCIERDAL--KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFM 75
+ +DT Q+ A+K +S E D + K LRE+ +L L+HP LVNL F+ + L +
Sbjct: 23 RNRDTGQIVAIKKFLES---EDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHL 79
Query: 76 VSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNIL 135
V + + + ++ Y G + ++ A+++ + IHRD+KP+NIL
Sbjct: 80 VFEYC-----DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENIL 134
Query: 136 LDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLG 194
+ + + DF A +L + T+ Y +PE+ + T Y VD W++G
Sbjct: 135 ITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQ----YGPPVDVWAIG 190
Query: 195 VTLFEILA 202
E+L+
Sbjct: 191 CVFAELLS 198
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 19 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 74
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + + R D I L Y ++ ++
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGME 128
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
YL TK IHRD+ NIL++ E I DF + VL +++ + +P +P IF A
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK--EPGESP-IFWYA 185
Query: 178 TDEVLGYSYSV--DWWSLGVTLFEILA 202
+ + +SV D WS GV L+E+
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 23 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 78
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + + R D I L Y ++ ++
Sbjct: 79 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGME 132
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
YL TK IHRD+ NIL++ E I DF + VL +++ + +P +P IF A
Sbjct: 133 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK--EPGESP-IFWYA 189
Query: 178 TDEVLGYSYSV--DWWSLGVTLFEILA 202
+ + +SV D WS GV L+E+
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V++ + G L + ++ Y R +
Sbjct: 61 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKY---LRLPQL 116
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 117 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 177 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 232 YR-MPCPPECPESLHDLMCQCWR 253
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 5 SSKFCGTSKVCIVQK---KDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEH-PFL 60
+SK G K +V++ K T Q YA K++ K + +D +L E+ +L + P +
Sbjct: 33 TSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR-RGQDCRAEILHEIAVLELAKSCPRV 91
Query: 61 VNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLK 120
+NL +++ ++ ++ + GG++ ++ + + ND I L ++ + YL
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEIFSLCLPELA--EMVSENDVIRLIK-QILEGVYYLH 148
Query: 121 TKHIIHRDIKPDNILLDE---EGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
+I+H D+KP NILL G I DF ++ + + GT Y+APEI
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEI---- 204
Query: 178 TDEVLGY---SYSVDWWSLGVTLFEILARGRPF 207
L Y + + D W++G+ + +L PF
Sbjct: 205 ----LNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 21/207 (10%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 18 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 73
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + R D I L Y ++ ++
Sbjct: 74 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH------KERIDHIKLLQYTSQICKGME 127
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
YL TK IHRD+ NIL++ E I DF + VL +++ + +P +P IF A
Sbjct: 128 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK--EPGESP-IFWYA 184
Query: 178 TDEVLGYSYSV--DWWSLGVTLFEILA 202
+ + +SV D WS GV L+E+
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 22 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 77
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + + R D I L Y ++ ++
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGME 131
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
YL TK IHRD+ NIL++ E I DF + VL +++ + +P +P IF A
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK--EPGESP-IFWYA 188
Query: 178 TDEVLGYSYSV--DWWSLGVTLFEILA 202
+ + +SV D WS GV L+E+
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V++ + G L + ++ Y R +
Sbjct: 52 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKY---LRLPQL 107
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 108 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 167
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 168 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 222
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 223 YR-MPCPPECPESLHDLMCQCWR 244
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 17 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 72
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + + R D I L Y ++ ++
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGME 126
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
YL TK IHRD+ NIL++ E I DF + VL +++ + +P +P IF A
Sbjct: 127 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK--EPGESP-IFWYA 183
Query: 178 TDEVLGYSYSV--DWWSLGVTLFEILA 202
+ + +SV D WS GV L+E+
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V++ + G L + ++ Y R +
Sbjct: 50 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKY---LRLPQL 105
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 106 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 165
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 166 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 220
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 221 YR-MPCPPECPESLHDLMCQCWR 242
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 14/175 (8%)
Query: 35 QCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIK 94
Q E+ + ++RE +I+ L++P++V L Q E L +V ++ GG L + +
Sbjct: 373 QGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKRE 431
Query: 95 FYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL- 153
V + +H ++ + + YL+ K+ +HR++ N+LL +A I+DF ++ L
Sbjct: 432 EIPVSNVAELLH----QVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487
Query: 154 -EENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
+++ +G P + APE +S D WS GVT++E L+ G+
Sbjct: 488 ADDSYYTARSAGKWPLKWYAPECI-----NFRKFSSRSDVWSYGVTMWEALSYGQ 537
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 19/165 (11%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFY 96
+ RE+ +L L+H ++ L F +D ++++V+ L+ G DL +K
Sbjct: 64 RRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADL----NNIVKCQ 118
Query: 97 SVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
++ ++ + ++L L Y+ + IIHRD+KP N+ ++E+ I DF +A +E
Sbjct: 119 ALS--DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE 176
Query: 157 QLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T T+ Y APEI L + Y+ +VD WS+G + E+L
Sbjct: 177 M--TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELL 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 25 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 80
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + + R D I L Y ++ ++
Sbjct: 81 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGME 134
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
YL TK IHRD+ NIL++ E I DF + VL +++ + +P +P IF A
Sbjct: 135 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK--EPGESP-IFWYA 191
Query: 178 TDEVLGYSYSV--DWWSLGVTLFEILA 202
+ + +SV D WS GV L+E+
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 23/231 (9%)
Query: 22 TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLL 81
T YA K ++ + RD K + RE I L+H +V L +E ++V DL+
Sbjct: 28 TGHEYAAKIINTKKLSARDHQK-LEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVT 86
Query: 82 GGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE-- 139
GG+L I ++YS + I ++ A+ + ++HRD+KP+N+LL +
Sbjct: 87 GGELFEDIVAR-EYYSEADASHCIQ----QILEAVLHCHQMGVVHRDLKPENLLLASKCK 141
Query: 140 -GHAHITDFNIATVLEENQLA-TSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTL 197
+ DF +A ++ +Q A +GT Y++PE+ Y VD W+ GV L
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEA-----YGKPVDIWACGVIL 196
Query: 198 FEILARGRPF-DIHSNTSVKDVKAIIYSPVHYPTA-WSEST---KHLLSQV 243
+ +L PF D + + +KA Y +P+ W T K+L++Q+
Sbjct: 197 YILLVGYPPFWDEDQHKLYQQIKAGAYD---FPSPEWDTVTPEAKNLINQM 244
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Query: 45 VLREMEILTTLEHPFLVNLWFCFQDEED--LFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ E+ +L L+HP +V + D + L++V + GGDL IT+ K
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 103 DTIHLYAFELGLALDYLKTKH-----IIHRDIKPDNILLDEEGHAHITDFNIATVLE-EN 156
+ + +L LAL + ++HRD+KP N+ LD + + + DF +A +L +
Sbjct: 112 FVLRVMT-QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT 170
Query: 157 QLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
A + GT Y++PE + Y+ D WSLG L+E+ A PF S +
Sbjct: 171 SFAKAFVGTPYYMSPEQM-----NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 16/205 (7%)
Query: 24 QMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGG 83
Q YA ++ + RD K + RE I L+HP +V L +E +++ DL+ GG
Sbjct: 37 QEYAAMIINTKKLSARDHQK-LEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 95
Query: 84 DLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE---G 140
+L I ++YS + I ++ A+ + ++HR++KP+N+LL +
Sbjct: 96 ELFEDIVAR-EYYSEADASHCIQ----QILEAVLHCHQMGVVHRNLKPENLLLASKLKGA 150
Query: 141 HAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFE 199
+ DF +A +E E Q +GT Y++PE+ Y VD W+ GV L+
Sbjct: 151 AVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP-----YGKPVDLWACGVILYI 205
Query: 200 ILARGRPF-DIHSNTSVKDVKAIIY 223
+L PF D + + +KA Y
Sbjct: 206 LLVGYPPFWDEDQHRLYQQIKAGAY 230
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V + + G L + ++ Y R +
Sbjct: 61 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKY---LRLPQL 116
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 117 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 177 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 232 YR-MPCPPECPESLHDLMCQCWR 253
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 44 NVLREMEILTTLE---HPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFY--- 96
+ +RE+ +L LE HP +V L C D + L+ H+ QD++ Y
Sbjct: 49 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVF-----EHVDQDLRTYLDK 103
Query: 97 --SVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
G +TI + LD+L I+HRD+KP+NIL+ G + DF +A +
Sbjct: 104 APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS 163
Query: 155 ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
+ T Y APE+ L +T Y+ VD WS+G E+ R
Sbjct: 164 YQMALDPVVVTLWYRAPEVLLQST-----YATPVDMWSVGCIFAEMFRR 207
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Query: 45 VLREMEILTTLEHPFLVNLWFCFQDEED--LFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ E+ +L L+HP +V + D + L++V + GGDL IT+ K
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 103 DTIHLYAFELGLALDYLKTKH-----IIHRDIKPDNILLDEEGHAHITDFNIATVLE-EN 156
+ + +L LAL + ++HRD+KP N+ LD + + + DF +A +L +
Sbjct: 112 FVLRVMT-QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT 170
Query: 157 QLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
A + GT Y++PE + Y+ D WSLG L+E+ A PF S +
Sbjct: 171 SFAKTFVGTPYYMSPEQM-----NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 16/175 (9%)
Query: 35 QCIERDALKNV-LREMEILTTLEHPFLVNLWFCFQDEED-LFMVSDLLLGGDLRYHITQD 92
+CI+ DA L E ++T L H LV L +E+ L++V++ + G L ++
Sbjct: 41 KCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR 100
Query: 93 IKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATV 152
+ G D + ++ ++ A++YL+ + +HRD+ N+L+ E+ A ++DF
Sbjct: 101 GRSVLGG---DCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG---- 153
Query: 153 LEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
L + +T +G P + APE A +S D WS G+ L+EI + GR
Sbjct: 154 LTKEASSTQDTGKLPVKWTAPEALREAA-----FSTKSDVWSFGILLWEIYSFGR 203
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
G+ F G ++ +++ K ++ A+KY+ + + I+ +NV RE+ +L HP +V
Sbjct: 28 GAGNF-GVAR--LMRDKQANELVAVKYIERGEKID----ENVKREIINHRSLRHPNIVRF 80
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
L +V + GG+L I +F D + +L + Y
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNAGRF-----SEDEARFFFQQLISGVSYAHAMQ 135
Query: 124 IIHRDIKPDNILLDEEGHAH--ITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
+ HRD+K +N LLD I DF + + S GT YIAPE+ L
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKE--- 192
Query: 182 LGYSYSV-DWWSLGVTLFEILARGRPFD 208
Y V D WS GVTL+ +L PF+
Sbjct: 193 --YDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 22/208 (10%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS +K+C D+ ++ A+K + ++ KN RE++I+ L+H +V L
Sbjct: 31 GSFGVVYQAKLC-----DSGELVAIK-----KVLQDKRFKN--RELQIMRKLDHCNIVRL 78
Query: 64 -WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI---HLYAFELGLALDYL 119
+F + E +V L+ + + + + YS + + LY ++L +L Y+
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 120 KTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMSGTKPYIAPEIFLVAT 178
+ I HRDIKP N+LLD + + DF A L + S ++ Y APE+ AT
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 198
Query: 179 DEVLGYSYSVDWWSLGVTLFEILARGRP 206
D Y+ S+D WS G L E+L G+P
Sbjct: 199 D----YTSSIDVWSAGCVLAELLL-GQP 221
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 10/173 (5%)
Query: 38 ERDAL--KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
ERD+ + + E+ + L+H +V F + + + + + GG L + K+
Sbjct: 57 ERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS--KW 114
Query: 96 YSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDE-EGHAHITDFNIATVLE 154
+ TI Y ++ L YL I+HRDIK DN+L++ G I+DF + L
Sbjct: 115 GPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174
Query: 155 E-NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
N + +GT Y+APEI GY + D WSLG T+ E +A G+P
Sbjct: 175 GINPCTETFTGTLQYMAPEIIDKGP---RGYGKAADIWSLGCTIIE-MATGKP 223
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Query: 45 VLREMEILTTLEHPFLVNLWFCFQDEED--LFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ E+ +L L+HP +V + D + L++V + GGDL IT+ K
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEE 111
Query: 103 DTIHLYAFELGLALDYLKTKH-----IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+ + +L LAL + ++HRD+KP N+ LD + + + DF +A +L ++
Sbjct: 112 FVLRVMT-QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE 170
Query: 158 -LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
A GT Y++PE + Y+ D WSLG L+E+ A PF S +
Sbjct: 171 DFAKEFVGTPYYMSPEQM-----NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL 224
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 19 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 74
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + + R D I L Y ++ ++
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGME 128
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ--LATSMSGTKP--YIAPEI 173
YL TK IHRD+ NIL++ E I DF + VL +++ G P + APE
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILA 202
+ +S + D WS GV L+E+
Sbjct: 189 LTESK-----FSVASDVWSFGVVLYELFT 212
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L A + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIMLNA----MHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 19/169 (11%)
Query: 44 NVLREMEILTTLE---HPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFY--- 96
+ +RE+ +L LE HP +V L C D + L+ H+ QD++ Y
Sbjct: 49 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVF-----EHVDQDLRTYLDK 103
Query: 97 --SVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
G +TI + LD+L I+HRD+KP+NIL+ G + DF +A +
Sbjct: 104 APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS 163
Query: 155 ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
+ T Y APE+ L +T Y+ VD WS+G E+ R
Sbjct: 164 YQMALFPVVVTLWYRAPEVLLQST-----YATPVDMWSVGCIFAEMFRR 207
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 50 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 100
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP+N+L++ EG + DF +A +
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR 160
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 161 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 202
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V++ + G L + ++ Y R +
Sbjct: 61 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKY---LRLPQL 116
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 117 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 177 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 232 YR-MPCPPECPESLHDLMCQCWR 253
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 49 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 99
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP+N+L++ EG + DF +A +
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR 159
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 160 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 201
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 4 GSSKFCGTSKVCIVQKKD-TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
G F S C D T +M A+K + K C + RE+EIL TL H +V
Sbjct: 18 GEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KEGCGPQ-LRSGWQREIEILRTLYHEHIVK 75
Query: 63 LWFCFQD--EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLK 120
C +D E+ + +V + + G LR ++ + + VG + L+A ++ + YL
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR----HCVGLAQ--LLLFAQQICEGMAYLH 129
Query: 121 TKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ--LATSMSGTKP--YIAPEIFLV 176
+H IHR + N+LLD + I DF +A + E G P + APE
Sbjct: 130 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL-- 187
Query: 177 ATDEVLGYSYSVDWWSLGVTLFEIL 201
+ + Y+ D WS GVTL+E+L
Sbjct: 188 ---KECKFYYASDVWSFGVTLYELL 209
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 4 GSSKFCGTSKVCIVQKKD-TKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
G F S C D T +M A+K + K C + RE+EIL TL H +V
Sbjct: 17 GEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KEGCGPQ-LRSGWQREIEILRTLYHEHIVK 74
Query: 63 LWFCFQD--EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLK 120
C +D E+ + +V + + G LR ++ + + VG + L+A ++ + YL
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPR----HCVGLAQ--LLLFAQQICEGMAYLH 128
Query: 121 TKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ--LATSMSGTKP--YIAPEIFLV 176
+H IHR + N+LLD + I DF +A + E G P + APE
Sbjct: 129 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL-- 186
Query: 177 ATDEVLGYSYSVDWWSLGVTLFEIL 201
+ + Y+ D WS GVTL+E+L
Sbjct: 187 ---KECKFYYASDVWSFGVTLYELL 208
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ + H LV L + EE +++V++ + G L + ++ Y R +
Sbjct: 61 LQEAQVMKKIRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKY---LRLPQL 116
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 117 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 177 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 232 YR-MPCPPECPESLHDLMCQCWR 253
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 26/207 (12%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL------WFCF 67
V +++ T Q A+K + + + +A K LRE++IL +H ++ + +
Sbjct: 70 VSSARRRLTGQQVAIKKIPNAFDVVTNA-KRTLRELKILKHFKHDNIIAIKDILRPTVPY 128
Query: 68 QDEEDLFMVSDLLLGGDLRY--HITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHII 125
+ + +++V DL+ DL H +Q + + + + ++L L Y+ + +I
Sbjct: 129 GEFKSVYVVLDLM-ESDLHQIIHSSQPLTL-------EHVRYFLYQLLRGLKYMHSAQVI 180
Query: 126 HRDIKPDNILLDEEGHAHITDFNIATVL-----EENQLATSMSGTKPYIAPEIFLVATDE 180
HRD+KP N+L++E I DF +A L E T T+ Y APE+ L +
Sbjct: 181 HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE- 239
Query: 181 VLGYSYSVDWWSLGVTLFEILARGRPF 207
Y+ ++D WS+G E+LAR + F
Sbjct: 240 ---YTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 10/173 (5%)
Query: 38 ERDAL--KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
ERD+ + + E+ + L+H +V F + + + + + GG L + K+
Sbjct: 43 ERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS--KW 100
Query: 96 YSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDE-EGHAHITDFNIATVLE 154
+ TI Y ++ L YL I+HRDIK DN+L++ G I+DF + L
Sbjct: 101 GPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 160
Query: 155 E-NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
N + +GT Y+APEI GY + D WSLG T+ E +A G+P
Sbjct: 161 GINPCTETFTGTLQYMAPEIIDKGPR---GYGKAADIWSLGCTIIE-MATGKP 209
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V++ + G L + + Y R +
Sbjct: 54 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKY---LRLPQL 109
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 110 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 169
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 170 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 224
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 225 YR-MPCPPECPESLHDLMCQCWR 246
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 17 VQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMV 76
+ K T ++ A+K + E +RE+ +L L HP +V L E L++V
Sbjct: 25 ARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 83
Query: 77 SDLLLGGDLRYHITQDIKFYS-----VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+ L QD+K + G I Y F+L L + + ++HRD+KP
Sbjct: 84 FEFL---------HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 132 DNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
N+L++ EG + DF +A + T Y APEI L YS +VD
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY----YSTAVDI 190
Query: 191 WSLGVTLFEILAR 203
WSLG E++ R
Sbjct: 191 WSLGCIFAEMVTR 203
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V++ + G L + ++ Y R +
Sbjct: 61 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKY---LRLPQL 116
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD+ NIL+ E + DF +A ++E+N+
Sbjct: 117 VDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 177 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 232 YR-MPCPPECPESLHDLMCQCWR 253
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 26/203 (12%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL------WFCF 67
V +++ T Q A+K + + + +A K LRE++IL +H ++ + +
Sbjct: 71 VSSARRRLTGQQVAIKKIPNAFDVVTNA-KRTLRELKILKHFKHDNIIAIKDILRPTVPY 129
Query: 68 QDEEDLFMVSDLLLGGDLRY--HITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHII 125
+ + +++V DL+ DL H +Q + + + + ++L L Y+ + +I
Sbjct: 130 GEFKSVYVVLDLM-ESDLHQIIHSSQPLTL-------EHVRYFLYQLLRGLKYMHSAQVI 181
Query: 126 HRDIKPDNILLDEEGHAHITDFNIATVL-----EENQLATSMSGTKPYIAPEIFLVATDE 180
HRD+KP N+L++E I DF +A L E T T+ Y APE+ L +
Sbjct: 182 HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE- 240
Query: 181 VLGYSYSVDWWSLGVTLFEILAR 203
Y+ ++D WS+G E+LAR
Sbjct: 241 ---YTQAIDLWSVGCIFGEMLAR 260
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 20/208 (9%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS F G ++ +++ K + ++ A+KY+ + + I NV RE+ +L HP +V
Sbjct: 28 GSGNF-GVAR--LMRDKQSNELVAVKYIERGEKIA----ANVKREIINHRSLRHPNIVRF 80
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
L +V + GG+L I +F D + +L + Y
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNAGRF-----SEDEARFFFQQLISGVSYCHAMQ 135
Query: 124 IIHRDIKPDNILLDEEGHAH--ITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
+ HRD+K +N LLD I DF + + S GT YIAPE+ L
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE--- 192
Query: 182 LGYSYSV-DWWSLGVTLFEILARGRPFD 208
Y V D WS GVTL+ +L PF+
Sbjct: 193 --YDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKDFMDASALT 98
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP+N+L++ EG + DF +A +
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR 158
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 159 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 200
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V + + G L + ++ Y R +
Sbjct: 61 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKY---LRLPQL 116
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 117 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAK 176
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 177 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 232 YR-MPCPPECPESLHDLMCQCWR 253
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 49 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 99
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 159
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 160 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 97
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 158 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 199
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 49 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 99
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 100 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 159
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 160 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 98
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 159 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 200
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V++ + G L + + Y R +
Sbjct: 227 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKY---LRLPQL 282
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 283 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 342
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 343 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 397
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 398 YR-MPCPPECPESLHDLMCQCWR 419
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 50 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 100
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 160
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 161 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 202
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V + + G L + ++ Y R +
Sbjct: 61 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKY---LRLPQL 116
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 117 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 177 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 232 YR-MPCPPECPESLHDLMCQCWR 253
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 51 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 101
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 162 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 203
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 50 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 100
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 160
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 161 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 51 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 101
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 102 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 161
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKY----YSTAVDIWSLGCIFAEMVTR 203
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 52 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 102
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 103 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 162
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 163 TYXHEVVTLWYRAPEILLGCKY----YSTAVDIWSLGCIFAEMVTR 204
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V++ + G L + + Y R +
Sbjct: 227 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKY---LRLPQL 282
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 283 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 342
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 343 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 397
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 398 YR-MPCPPECPESLHDLMCQCWR 419
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 98
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 159 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 97
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 98 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 157
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 158 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 98
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 159 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L QD+K +
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------HQDLKKFMDASALT 98
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 99 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 159 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 200
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
GT V K ++ A+K + + + +RE+ +L L HP +V+L
Sbjct: 32 GTYGVVYKAKDSQGRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS 90
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
E L +V + + DL+ + ++ G ++ I +Y ++L + + I+HRD+
Sbjct: 91 ERCLTLVFEFM-EKDLKKVLDEN----KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDL 145
Query: 130 KPDNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
KP N+L++ +G + DF +A + T T Y AP++ + + YS SV
Sbjct: 146 KPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK----YSTSV 201
Query: 189 DWWSLGVTLFEILARGRPF--DIHSNTSVKDVKAIIYSPVHYPTAWSE 234
D WS+G E++ G+P + + + + +I+ +P P W +
Sbjct: 202 DIWSIGCIFAEMIT-GKPLFPGVTDDDQLPKIFSILGTP--NPREWPQ 246
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 16/228 (7%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQD 69
GT V K ++ A+K + + + +RE+ +L L HP +V+L
Sbjct: 32 GTYGVVYKAKDSQGRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS 90
Query: 70 EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDI 129
E L +V + + DL+ + ++ G ++ I +Y ++L + + I+HRD+
Sbjct: 91 ERCLTLVFEFM-EKDLKKVLDEN----KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDL 145
Query: 130 KPDNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
KP N+L++ +G + DF +A + T T Y AP++ + + YS SV
Sbjct: 146 KPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKK----YSTSV 201
Query: 189 DWWSLGVTLFEILARGRPF--DIHSNTSVKDVKAIIYSPVHYPTAWSE 234
D WS+G E++ G+P + + + + +I+ +P P W +
Sbjct: 202 DIWSIGCIFAEMIT-GKPLFPGVTDDDQLPKIFSILGTP--NPREWPQ 246
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 78 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 130
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + YL +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 131 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSV 190
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 191 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 17 VQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMV 76
+ K T ++ A+K + E +RE+ +L L HP +V L E L++V
Sbjct: 25 ARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 83
Query: 77 SDLLLGGDLRYHITQDIKFYS-----VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+ L + D+K + G I Y F+L L + + ++HRD+KP
Sbjct: 84 FEFL---------SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 132 DNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
+N+L++ EG + DF +A + T Y APEI L YS +VD
Sbjct: 135 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDI 190
Query: 191 WSLGVTLFEILAR 203
WSLG E++ R
Sbjct: 191 WSLGCIFAEMVTR 203
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 20/193 (10%)
Query: 17 VQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMV 76
+ K T ++ A+K + E +RE+ +L L HP +V L E L++V
Sbjct: 23 ARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 81
Query: 77 SDLLLGGDLRYHITQDIKFYS-----VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+ L + D+K + G I Y F+L L + + ++HRD+KP
Sbjct: 82 FEFL---------SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 132
Query: 132 DNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
+N+L++ EG + DF +A + T Y APEI L YS +VD
Sbjct: 133 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDI 188
Query: 191 WSLGVTLFEILAR 203
WSLG E++ R
Sbjct: 189 WSLGCIFAEMVTR 201
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V + + G L + + Y R +
Sbjct: 227 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVGEYMSKGSLLDFLKGETGKY---LRLPQL 282
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 283 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 342
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 343 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 397
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 398 YR-MPCPPECPESLHDLMCQCWR 419
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 18/181 (9%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
+++ L E ++ TL+H LV L +E ++++++ + G L + D G+
Sbjct: 53 SVEAFLAEANVMKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSD-----EGS 106
Query: 101 RNDTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQL 158
+ L F +A + +++ ++ IHRD++ NIL+ I DF +A V+E+N+
Sbjct: 107 KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 166
Query: 159 ATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTS 214
T+ G K + APE + ++ D WS G+ L EI+ GR P+ SN
Sbjct: 167 -TAREGAKFPIKWTAPEAINFGS-----FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 220
Query: 215 V 215
V
Sbjct: 221 V 221
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 18/181 (9%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
+++ L E ++ TL+H LV L +E ++++++ + G L + D G+
Sbjct: 226 SVEAFLAEANVMKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSD-----EGS 279
Query: 101 RNDTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQL 158
+ L F +A + +++ ++ IHRD++ NIL+ I DF +A V+E+N+
Sbjct: 280 KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY 339
Query: 159 ATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTS 214
T+ G K + APE + ++ D WS G+ L EI+ GR P+ SN
Sbjct: 340 -TAREGAKFPIKWTAPEAINFGS-----FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE 393
Query: 215 V 215
V
Sbjct: 394 V 394
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKXQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V++ + G L + + Y R +
Sbjct: 310 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKY---LRLPQL 365
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 366 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 425
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 426 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 480
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 481 YR-MPCPPECPESLHDLMCQCWR 502
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V + + G L + ++ Y R +
Sbjct: 61 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKY---LRLPQL 116
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 117 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 176
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 177 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 231
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 232 YR-MPCPPECPESLHDLMCQCWR 253
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V++ + G L + ++ Y R +
Sbjct: 228 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKY---LRLPQL 283
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF + ++E+N+
Sbjct: 284 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAK 343
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 344 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 398
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 399 YR-MPCPPECPESLHDLMCQCWR 420
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 16/175 (9%)
Query: 35 QCIERDALKNV-LREMEILTTLEHPFLVNLWFCFQDEED-LFMVSDLLLGGDLRYHITQD 92
+CI+ DA L E ++T L H LV L +E+ L++V++ + G L ++
Sbjct: 222 KCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR 281
Query: 93 IKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATV 152
+ G D + ++ ++ A++YL+ + +HRD+ N+L+ E+ A ++DF
Sbjct: 282 GRSVLGG---DCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG---- 334
Query: 153 LEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
L + +T +G P + APE +S D WS G+ L+EI + GR
Sbjct: 335 LTKEASSTQDTGKLPVKWTAPEALREKK-----FSTKSDVWSFGILLWEIYSFGR 384
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCAKL-- 118
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 119 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 175
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 176 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKXQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 128
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 129 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM 185
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 186 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 226
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 22/206 (10%)
Query: 4 GSSKFCGTSKVCIVQKKD-TKQMYAMKYMHKSQCIE-RDALKNVLREMEILTTLEHPFLV 61
G F S C D T +M A+K + + R K +E++IL TL H ++
Sbjct: 40 GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWK---QEIDILRTLYHEHII 96
Query: 62 NLWFCFQDE--EDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYL 119
C +D L +V + + G LR ++ + +S+G + L+A ++ + YL
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR----HSIGLAQ--LLLFAQQICEGMAYL 150
Query: 120 KTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ--LATSMSGTKP--YIAPEIFL 175
+H IHRD+ N+LLD + I DF +A + E G P + APE
Sbjct: 151 HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL- 209
Query: 176 VATDEVLGYSYSVDWWSLGVTLFEIL 201
+ + Y+ D WS GVTL+E+L
Sbjct: 210 ----KEYKFYYASDVWSFGVTLYELL 231
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 24/210 (11%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS F G ++ +++ K + ++ A+KY+ + + I+ +NV RE+ +L HP +V
Sbjct: 28 GSGNF-GVAR--LMRDKQSNELVAVKYIERGEKID----ENVKREIINHRSLRHPNIVRF 80
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
L +V + GG+L I +F D + +L + Y
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNAGRF-----SEDEARFFFQQLISGVSYCHAMQ 135
Query: 124 IIHRDIKPDNILLDEEGHAHIT----DFNIATVLEENQLATSMSGTKPYIAPEIFLVATD 179
+ HRD+K +N LLD + ++ ++VL +T GT YIAPE+ L
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST--VGTPAYIAPEVLLKKE- 192
Query: 180 EVLGYSYSV-DWWSLGVTLFEILARGRPFD 208
Y V D WS GVTL+ +L PF+
Sbjct: 193 ----YDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 124
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 125 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM 181
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 182 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 222
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE + +V++ + G L + + Y R +
Sbjct: 51 LQEAQVMKKLRHEKLVQL-YAVVSEEPIXIVTEYMSKGSLLDFLKGETGKY---LRLPQL 106
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
A ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 107 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAK 166
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 167 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 221
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 222 YR-MPCPPECPESLHDLMCQCWR 243
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 78 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 130
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + YL +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 131 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 190
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 191 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 131
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + YL +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 132 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 191
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 4 GSSKFCGTSKVCIVQ--KKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLV 61
G F G+ ++C + +T ++ A+K + S + L++ RE+EIL +L+H +V
Sbjct: 20 GKGNF-GSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDNIV 75
Query: 62 NL-WFCFQ-DEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHL--YAFELGLALD 117
C+ +L ++ + L G LR ++ + + R D I L Y ++ ++
Sbjct: 76 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE------RIDHIKLLQYTSQICKGME 129
Query: 118 YLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVA 177
YL TK IHR++ NIL++ E I DF + VL +++ + +P +P IF A
Sbjct: 130 YLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVK--EPGESP-IFWYA 186
Query: 178 TDEVLGYSYSV--DWWSLGVTLFEILA 202
+ + +SV D WS GV L+E+
Sbjct: 187 PESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V++ + G L + + Y R +
Sbjct: 58 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKY---LRLPQL 113
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
+ ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 114 VDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAK 173
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 174 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 228
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 229 YR-MPCPPECPESLHDLMCQCWR 250
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 71 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 123
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + YL +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 124 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 183
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 184 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 16/175 (9%)
Query: 35 QCIERDALKNV-LREMEILTTLEHPFLVNLWFCFQDEED-LFMVSDLLLGGDLRYHITQD 92
+CI+ DA L E ++T L H LV L +E+ L++V++ + G L ++
Sbjct: 50 KCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR 109
Query: 93 IKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATV 152
+ G D + ++ ++ A++YL+ + +HRD+ N+L+ E+ A ++DF
Sbjct: 110 GRSVLGG---DCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG---- 162
Query: 153 LEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
L + +T +G P + APE +S D WS G+ L+EI + GR
Sbjct: 163 LTKEASSTQDTGKLPVKWTAPEALREKK-----FSTKSDVWSFGILLWEIYSFGR 212
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 74 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 126
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + YL +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 127 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 186
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 187 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 16/175 (9%)
Query: 35 QCIERDALKNV-LREMEILTTLEHPFLVNLWFCFQDEED-LFMVSDLLLGGDLRYHITQD 92
+CI+ DA L E ++T L H LV L +E+ L++V++ + G L ++
Sbjct: 35 KCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSR 94
Query: 93 IKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATV 152
+ G D + ++ ++ A++YL+ + +HRD+ N+L+ E+ A ++DF
Sbjct: 95 GRSVLGG---DCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG---- 147
Query: 153 LEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
L + +T +G P + APE +S D WS G+ L+EI + GR
Sbjct: 148 LTKEASSTQDTGKLPVKWTAPEALREKK-----FSTKSDVWSFGILLWEIYSFGR 197
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 131
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + YL +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 132 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 191
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 77 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 129
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + YL +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 130 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 189
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 190 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 13/203 (6%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
L+E +++ L H LV L + EE +++V++ + G L + + Y R +
Sbjct: 58 LQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKY---LRLPQL 113
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGT 165
+ ++ + Y++ + +HRD++ NIL+ E + DF +A ++E+N+
Sbjct: 114 VDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAK 173
Query: 166 KP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKDVKAII 222
P + APE L ++ D WS G+ L E+ +GR P+ N V D
Sbjct: 174 FPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 228
Query: 223 YSPVHYPTAWSESTKHLLSQVHR 245
Y + P ES L+ Q R
Sbjct: 229 YR-MPCPPECPESLHDLMCQCWR 250
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGXVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 98 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 150
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + YL +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 151 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 210
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 211 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 77 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 133
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 134 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM 190
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 191 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 76 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 128
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + YL +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 129 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 188
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 97 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 149
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + YL +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 150 VKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV 209
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 210 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 118
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 119 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 175
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 176 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 216
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 19/166 (11%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS-----V 98
+RE+ +L L HP +V L E L++V + L + D+K +
Sbjct: 50 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---------SMDLKDFMDASALT 100
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQ 157
G I Y F+L L + + ++HRD+KP N+L++ EG + DF +A +
Sbjct: 101 GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 160
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
T Y APEI L YS +VD WSLG E++ R
Sbjct: 161 TYXHEVVTLWYRAPEILLGCK----YYSTAVDIWSLGCIFAEMVTR 202
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 134
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 135 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 191
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 192 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 134
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 135 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 191
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 192 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 232
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 129
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A
Sbjct: 130 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RH 181
Query: 158 LATSMSG---TKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
A M+G T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 182 TADEMTGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 127
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 128 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM 184
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 185 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 128
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 129 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 185
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 186 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 226
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 20/169 (11%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCF------QDEEDLFMVSDLLLGGDLRYHITQDIKFY 96
K RE+ +L ++H ++ L F ++ D+++V+ L+ G DL +I + K
Sbjct: 95 KRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADLN-NIVKCQKL- 151
Query: 97 SVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 152 ----TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 207
Query: 157 QLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 208 M--TGYVATRWYRAPEIML----NWMHYNMTVDIWSVGCIMAELLT-GR 249
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKSQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF + ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 129
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A
Sbjct: 130 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RH 181
Query: 158 LATSMSG---TKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
A M+G T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 182 TADEMTGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 227
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 20/193 (10%)
Query: 17 VQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMV 76
+ K T ++ A+K + E +RE+ +L L HP +V L E L++V
Sbjct: 25 ARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 83
Query: 77 SDLLLGGDLRYHITQDIKFYS-----VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
+ L + D+K + G I Y F+L L + + ++HRD+KP
Sbjct: 84 FEFL---------SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKP 134
Query: 132 DNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDW 190
N+L++ EG + DF +A + T Y APEI L YS +VD
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK----YYSTAVDI 190
Query: 191 WSLGVTLFEILAR 203
WSLG E++ R
Sbjct: 191 WSLGCIFAEMVTR 203
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 127
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 128 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM 184
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 185 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 225
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 127
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 128 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 184
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 185 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 128
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 129 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 185
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 186 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 65 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 121
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 122 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 178
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 179 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 219
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
K VLRE+ +L HP ++ L F E+ M L+ +R + Q I +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 103 DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSM 162
I + + + L L L ++HRD+ P NILL + I DFN+A + T
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHY 193
Query: 163 SGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
+ Y APE+ + + G++ VD WS G + E+ R F
Sbjct: 194 VTHRWYRAPELVM----QFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 134
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 135 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 191
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 192 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 232
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 64 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 120
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 121 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 177
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 178 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 218
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 124
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 125 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 181
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 182 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 222
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 142
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 143 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 199
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 200 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 240
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 129
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A
Sbjct: 130 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA-----RH 181
Query: 158 LATSMSG---TKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
A M+G T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 182 TADEMTGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
K VLRE+ +L HP ++ L F E+ M L+ +R + Q I +
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISP 133
Query: 103 DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSM 162
I + + + L L L ++HRD+ P NILL + I DFN+A + T
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHY 193
Query: 163 SGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
+ Y APE+ + + G++ VD WS G + E+ R F
Sbjct: 194 VTHRWYRAPELVM----QFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 76 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 132
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 133 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 189
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 190 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 230
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 85 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 141
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 142 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 198
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 199 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 239
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 129
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 130 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 186
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 187 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 127
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 128 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 184
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 185 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 142
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 143 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 199
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 200 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 240
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 124
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 125 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 181
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 182 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 124
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 125 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 181
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 182 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 222
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 85 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 141
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 142 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 198
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 199 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 239
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 83/163 (50%), Gaps = 9/163 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H ++ L F ++ L D+ + +L +++Q I+ +
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ Y APE+ L +GY +VD WS+GV + E++ G
Sbjct: 185 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGVIMGEMIKGG 222
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 119
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 120 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 176
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 177 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 119
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 120 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 176
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 177 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 118
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 119 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 175
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 176 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 216
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 77 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 133
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 134 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 190
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 191 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 231
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLD-EEGHAHITDFNIATVLEENQLATSMS 163
I Y +EL ALDY +K I+HRD+KP N+++D ++ + D+ +A Q
Sbjct: 139 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRV 198
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 199 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRREPF 238
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 128
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 129 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 185
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 186 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 226
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLD-EEGHAHITDFNIATVLEENQLATSMS 163
I Y +EL ALDY +K I+HRD+KP N+++D ++ + D+ +A Q
Sbjct: 134 IRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRV 193
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 194 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRREPF 233
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 89 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 145
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 146 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 202
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 203 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 243
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 138 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 190
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + +L +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 191 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 250
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 251 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 90/196 (45%), Gaps = 24/196 (12%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDL 73
VC T A+K +++ E A K RE+ +L + H ++ L F +E L
Sbjct: 41 VCSAVDGRTGAKVAIKKLYRPFQSELFA-KRAYRELRLLKHMRHENVIGLLDVFTPDETL 99
Query: 74 FMVSDLLL-----GGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRD 128
+D L G DL + +K +G D I +++ L Y+ IIHRD
Sbjct: 100 DDFTDFYLVMPFMGTDL----GKLMKHEKLG--EDRIQFLVYQMLKGLRYIHAAGIIHRD 153
Query: 129 IKPDNILLDEEGHAHITDFNIATVLEENQLATSMSG---TKPYIAPEIFLVATDEVLGYS 185
+KP N+ ++E+ I DF +A Q + M G T+ Y APE+ L + Y+
Sbjct: 154 LKPGNLAVNEDCELKILDFGLA-----RQADSEMXGXVVTRWYRAPEVIL----NWMRYT 204
Query: 186 YSVDWWSLGVTLFEIL 201
+VD WS+G + E++
Sbjct: 205 QTVDIWSVGCIMAEMI 220
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 77 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 129
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + +L +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 130 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 189
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 190 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 131
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + +L +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 132 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 191
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 84 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 136
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + +L +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 137 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 196
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 197 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 79 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 131
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + +L +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 132 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 191
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 107/218 (49%), Gaps = 22/218 (10%)
Query: 7 KFCGTSKVCIVQKKDTKQMY--AMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLW 64
K GT + +V+ + Y A+K M K + D + E +++ L H LV L+
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLY 76
Query: 65 FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAF--ELGLALDYLKTK 122
+ +F++++ + G L ++ + + R T L ++ A++YL++K
Sbjct: 77 GVCTKQRPIFIITEYMANGCLLNYLRE------MRHRFQTQQLLEMCKDVCEAMEYLESK 130
Query: 123 HIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP--YIAPEIFLVATDE 180
+HRD+ N L++++G ++DF ++ + +++ +S+ P + PE+ + +
Sbjct: 131 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-- 188
Query: 181 VLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKD 217
+S D W+ GV ++EI + G+ P++ +N+ +
Sbjct: 189 ---FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 223
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 14/183 (7%)
Query: 27 AMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR 86
A K + +++ +KN E+ ++ L+H L+ L+ F+ + D+ +V + + GG+L
Sbjct: 118 AAKIIKTRGMKDKEEVKN---EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174
Query: 87 YHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILL--DEEGHAHI 144
I + Y++ T DTI L+ ++ + ++ +I+H D+KP+NIL + I
Sbjct: 175 DRIIDE--SYNL-TELDTI-LFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKI 230
Query: 145 TDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
DF +A + + GT ++APE+ V D V S+ D WS+GV + +L+
Sbjct: 231 IDFGLARRYKPREKLKVNFGTPEFLAPEV--VNYDFV---SFPTDMWSVGVIAYMLLSGL 285
Query: 205 RPF 207
PF
Sbjct: 286 SPF 288
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 107/218 (49%), Gaps = 22/218 (10%)
Query: 7 KFCGTSKVCIVQKKDTKQMY--AMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLW 64
K GT + +V+ + Y A+K + + E + + E +++ L H LV L+
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQLY 85
Query: 65 FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAF--ELGLALDYLKTK 122
+ +F++++ + G L ++ + + R T L ++ A++YL++K
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLRE------MRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 123 HIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP--YIAPEIFLVATDE 180
+HRD+ N L++++G ++DF ++ + +++ +S+ P + PE+ + +
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-- 197
Query: 181 VLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKD 217
+S D W+ GV ++EI + G+ P++ +N+ +
Sbjct: 198 ---FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 232
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 83/163 (50%), Gaps = 9/163 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H ++ L F ++ L D+ + +L +++Q I+ +
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ Y APE+ L +GY +VD WS+GV + E++ G
Sbjct: 185 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGVIMGEMIKGG 222
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 80 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 132
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + +L +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 133 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV 192
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 193 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 25/175 (14%)
Query: 43 KNVLREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVG 99
K + E+ L+ + HP +V L+ C + +V + GG L H + + +Y+
Sbjct: 47 KAFIVELRQLSRVNHPNIVKLYGACLNP---VCLVMEYAEGGSLYNVLHGAEPLPYYTAA 103
Query: 100 TRNDTIHLYAFEL----GLA-LDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVL 153
H ++ L G+A L ++ K +IHRD+KP N+LL G I DF A +
Sbjct: 104 ------HAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI 157
Query: 154 EENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFD 208
+ + T+ G+ ++APE+F E YS D +S G+ L+E++ R +PFD
Sbjct: 158 QTHM--TNNKGSAAWMAPEVF-----EGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 34/211 (16%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERD--ALKNVLREMEILTTLEHPFLVNLWF-----C 66
VC K T ++ A+K K + ++ AL+ LRE++IL +H ++ ++
Sbjct: 27 VCSATHKPTGEIVAIK---KIEPFDKPLFALR-TLREIKILKHFKHENIITIFNIQRPDS 82
Query: 67 FQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIH 126
F++ +++++ +L+ R TQ + +D I + ++ A+ L ++IH
Sbjct: 83 FENFNEVYIIQELMQTDLHRVISTQMLS-------DDHIQYFIYQTLRAVKVLHGSNVIH 135
Query: 127 RDIKPDNILLDEEGHAHITDFNIATVLEENQLATS-----MSG------TKPYIAPEIFL 175
RD+KP N+L++ + DF +A +++E+ S SG T+ Y APE+ L
Sbjct: 136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVML 195
Query: 176 VATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ YS ++D WS G L E+ R RP
Sbjct: 196 TSAK----YSRAMDVWSCGCILAELFLR-RP 221
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 107/218 (49%), Gaps = 22/218 (10%)
Query: 7 KFCGTSKVCIVQKKDTKQMY--AMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLW 64
K GT + +V+ + Y A+K M K + D + E +++ L H LV L+
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLY 70
Query: 65 FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAF--ELGLALDYLKTK 122
+ +F++++ + G L ++ + + R T L ++ A++YL++K
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLRE------MRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 123 HIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP--YIAPEIFLVATDE 180
+HRD+ N L++++G ++DF ++ + +++ +S+ P + PE+ + +
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK-- 182
Query: 181 VLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKD 217
+S D W+ GV ++EI + G+ P++ +N+ +
Sbjct: 183 ---FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 217
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 34/211 (16%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERD--ALKNVLREMEILTTLEHPFLVNLWF-----C 66
VC K T ++ A+K K + ++ AL+ LRE++IL +H ++ ++
Sbjct: 27 VCSATHKPTGEIVAIK---KIEPFDKPLFALR-TLREIKILKHFKHENIITIFNIQRPDS 82
Query: 67 FQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIH 126
F++ +++++ +L+ R TQ + +D I + ++ A+ L ++IH
Sbjct: 83 FENFNEVYIIQELMQTDLHRVISTQMLS-------DDHIQYFIYQTLRAVKVLHGSNVIH 135
Query: 127 RDIKPDNILLDEEGHAHITDFNIATVLEENQLATS-----MSG------TKPYIAPEIFL 175
RD+KP N+L++ + DF +A +++E+ S SG T+ Y APE+ L
Sbjct: 136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVML 195
Query: 176 VATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ YS ++D WS G L E+ R RP
Sbjct: 196 TSAK----YSRAMDVWSCGCILAELFLR-RP 221
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 91/177 (51%), Gaps = 16/177 (9%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
+ E +++ L H LV L+ + +F++++ + G L ++ + + R T
Sbjct: 47 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE------MRHRFQTQ 100
Query: 106 HLYAF--ELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
L ++ A++YL++K +HRD+ N L++++G ++DF ++ + +++ +S+
Sbjct: 101 QLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160
Query: 164 GTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKD 217
P + PE+ + + +S D W+ GV ++EI + G+ P++ +N+ +
Sbjct: 161 SKFPVRWSPPEVLMYSK-----FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 212
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 91/177 (51%), Gaps = 16/177 (9%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
+ E +++ L H LV L+ + +F++++ + G L ++ + + R T
Sbjct: 51 IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE------MRHRFQTQ 104
Query: 106 HLYAF--ELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
L ++ A++YL++K +HRD+ N L++++G ++DF ++ + +++ +S+
Sbjct: 105 QLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 164
Query: 164 GTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKD 217
P + PE+ + + +S D W+ GV ++EI + G+ P++ +N+ +
Sbjct: 165 SKFPVRWSPPEVLMYSK-----FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 216
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 11/165 (6%)
Query: 46 LREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
L E I+ HP +++L C + E +V + GDLR I + T N T
Sbjct: 80 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-------THNPT 132
Query: 105 IH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
+ L F L +A + +L +K +HRD+ N +LDE+ + DF +A + + + +
Sbjct: 133 VKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSV 192
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ T + + + + + ++ D WS GV L+E++ RG P
Sbjct: 193 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 24/210 (11%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL 63
GS F G ++ +++ K + ++ A+KY+ + + I+ +NV RE+ +L HP +V
Sbjct: 28 GSGNF-GVAR--LMRDKQSNELVAVKYIERGEKID----ENVKREIINHRSLRHPNIVRF 80
Query: 64 WFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
L +V + GG+L I +F D + +L + Y
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNAGRF-----SEDEARFFFQQLISGVSYCHAMQ 135
Query: 124 IIHRDIKPDNILLDEEGHAHIT----DFNIATVLEENQLATSMSGTKPYIAPEIFLVATD 179
+ HRD+K +N LLD + ++ ++VL T GT YIAPE+ L
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT--VGTPAYIAPEVLLKKE- 192
Query: 180 EVLGYSYSV-DWWSLGVTLFEILARGRPFD 208
Y V D WS GVTL+ +L PF+
Sbjct: 193 ----YDGKVADVWSCGVTLYVMLVGAYPFE 218
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 21 DTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF--QDEEDLFMVSD 78
+T + A+K + S D ++ RE++IL L F+V +L +V +
Sbjct: 34 NTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVME 90
Query: 79 LLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDE 138
L G LR + + + + LY+ ++ ++YL ++ +HRD+ NIL++
Sbjct: 91 YLPSGCLRDFLQR----HRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES 146
Query: 139 EGHAHITDFNIATV--LEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLG 194
E H I DF +A + L+++ G P + APE +D + +S D WS G
Sbjct: 147 EAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL---SDNI--FSRQSDVWSFG 201
Query: 195 VTLFEIL 201
V L+E+
Sbjct: 202 VVLYELF 208
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 17/197 (8%)
Query: 17 VQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMV 76
V ++T ++ MK + + + + + L+E++++ LEHP ++ ++ L +
Sbjct: 29 VTHRETGEVMVMKELIR---FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85
Query: 77 SDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILL 136
++ + GG LR I Y R +A ++ + YL + +IIHRD+ N L+
Sbjct: 86 TEYIKGGTLRGIIKSMDSQYPWSQRVS----FAKDIASGMAYLHSMNIIHRDLNSHNCLV 141
Query: 137 DEEGHAHITDFNIATVL--EENQLATSMSGTKP------YIAPEIFLVATDEVLGYSY-- 186
E + + DF +A ++ E+ Q S KP + + +A + + G SY
Sbjct: 142 RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDE 201
Query: 187 SVDWWSLGVTLFEILAR 203
VD +S G+ L EI+ R
Sbjct: 202 KVDVFSFGIVLCEIIGR 218
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 34/211 (16%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERD--ALKNVLREMEILTTLEHPFLVNLWF-----C 66
VC K T ++ A+K K + ++ AL+ LRE++IL +H ++ ++
Sbjct: 27 VCSATHKPTGEIVAIK---KIEPFDKPLFALR-TLREIKILKHFKHENIITIFNIQRPDS 82
Query: 67 FQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIH 126
F++ +++++ +L+ R TQ + +D I + ++ A+ L ++IH
Sbjct: 83 FENFNEVYIIQELMQTDLHRVISTQMLS-------DDHIQYFIYQTLRAVKVLHGSNVIH 135
Query: 127 RDIKPDNILLDEEGHAHITDFNIATVLEENQLATS-----MSG------TKPYIAPEIFL 175
RD+KP N+L++ + DF +A +++E+ S SG T+ Y APE+ L
Sbjct: 136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVML 195
Query: 176 VATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
+ YS ++D WS G L E+ R RP
Sbjct: 196 TSAK----YSRAMDVWSCGCILAELFLR-RP 221
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 38 ERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS 97
E +RE+ ++ L+H +V L+ E L +V + + +Y ++ +
Sbjct: 43 EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTP 102
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATV--LEE 155
G + + + ++L L + I+HRD+KP N+L+++ G + DF +A +
Sbjct: 103 RGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162
Query: 156 NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
N ++ + T Y AP++ + + YS S+D WS G L E++ G+P + T+
Sbjct: 163 NTFSSEVV-TLWYRAPDVLMGSRT----YSTSIDIWSCGCILAEMIT-GKP--LFPGTND 214
Query: 216 KDVKAIIYSPVHYP--TAWSESTK 237
++ +I+ + P + W TK
Sbjct: 215 EEQLKLIFDIMGTPNESLWPSVTK 238
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 25/175 (14%)
Query: 43 KNVLREMEILTTLEHPFLVNLW-FCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVG 99
K + E+ L+ + HP +V L+ C + +V + GG L H + + +Y+
Sbjct: 46 KAFIVELRQLSRVNHPNIVKLYGACLNP---VCLVMEYAEGGSLYNVLHGAEPLPYYTAA 102
Query: 100 TRNDTIHLYAFEL----GLA-LDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVL 153
H ++ L G+A L ++ K +IHRD+KP N+LL G I DF A +
Sbjct: 103 ------HAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI 156
Query: 154 EENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFD 208
+ + T+ G+ ++APE+F E YS D +S G+ L+E++ R +PFD
Sbjct: 157 QTHM--TNNKGSAAWMAPEVF-----EGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
A KN E+ +L H ++ L+ + + L +V+ G L +H+ + + T
Sbjct: 52 AFKN---EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHL------HIIET 101
Query: 101 RNDTIHLY--AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE--- 155
+ + I L A + +DYL K IIHRD+K +NI L E+ I DF +ATV
Sbjct: 102 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 161
Query: 156 NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
+ +SG+ ++APE+ + + YS+ D ++ G+ L+E++ P+ SN +
Sbjct: 162 SHQFEQLSGSILWMAPEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY---SNINN 216
Query: 216 KD 217
+D
Sbjct: 217 RD 218
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 107/218 (49%), Gaps = 22/218 (10%)
Query: 7 KFCGTSKVCIVQKKDTKQMY--AMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLW 64
K GT + +V+ + Y A+K + + E + + E +++ L H LV L+
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE----FIEEAKVMMNLSHEKLVQLY 85
Query: 65 FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAF--ELGLALDYLKTK 122
+ +F++++ + G L ++ + + R T L ++ A++YL++K
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLRE------MRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 123 HIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP--YIAPEIFLVATDE 180
+HRD+ N L++++G ++DF ++ + +++ +S+ P + PE+ + +
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSK-- 197
Query: 181 VLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKD 217
+S D W+ GV ++EI + G+ P++ +N+ +
Sbjct: 198 ---FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 232
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 21 DTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF--QDEEDLFMVSD 78
+T + A+K + S D ++ RE++IL L F+V + L +V +
Sbjct: 38 NTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 94
Query: 79 LLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDE 138
L G LR + + + + LY+ ++ ++YL ++ +HRD+ NIL++
Sbjct: 95 YLPSGCLRDFLQR----HRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES 150
Query: 139 EGHAHITDFNIATV--LEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLG 194
E H I DF +A + L+++ G P + APE +D + +S D WS G
Sbjct: 151 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL---SDNI--FSRQSDVWSFG 205
Query: 195 VTLFEIL 201
V L+E+
Sbjct: 206 VVLYELF 212
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
A KN E+ +L H ++ L+ + + L +V+ G L +H+ + + T
Sbjct: 55 AFKN---EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHL------HIIET 104
Query: 101 RNDTIHLY--AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE--- 155
+ + I L A + +DYL K IIHRD+K +NI L E+ I DF +ATV
Sbjct: 105 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 164
Query: 156 NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
+ +SG+ ++APE+ + + YS+ D ++ G+ L+E++ P+ SN +
Sbjct: 165 SHQFEQLSGSILWMAPEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY---SNINN 219
Query: 216 KD 217
+D
Sbjct: 220 RD 221
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 21 DTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF--QDEEDLFMVSD 78
+T + A+K + S D ++ RE++IL L F+V + L +V +
Sbjct: 50 NTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106
Query: 79 LLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDE 138
L G LR + + + + LY+ ++ ++YL ++ +HRD+ NIL++
Sbjct: 107 YLPSGCLRDFLQR----HRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES 162
Query: 139 EGHAHITDFNIATV--LEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLG 194
E H I DF +A + L+++ G P + APE +D + +S D WS G
Sbjct: 163 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL---SDNI--FSRQSDVWSFG 217
Query: 195 VTLFEIL 201
V L+E+
Sbjct: 218 VVLYELF 224
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
A KN E+ +L H ++ L+ + + L +V+ G L +H+ + + T
Sbjct: 77 AFKN---EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHL------HIIET 126
Query: 101 RNDTIHLY--AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE--- 155
+ + I L A + +DYL K IIHRD+K +NI L E+ I DF +ATV
Sbjct: 127 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 186
Query: 156 NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
+ +SG+ ++APE+ + YS+ D ++ G+ L+E++ P+ SN +
Sbjct: 187 SHQFEQLSGSILWMAPEVIRMQDKNP--YSFQSDVYAFGIVLYELMTGQLPY---SNINN 241
Query: 216 KD 217
+D
Sbjct: 242 RD 243
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
A KN E+ +L H ++ L+ + + L +V+ G L +H+ + + T
Sbjct: 78 AFKN---EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHL------HIIET 127
Query: 101 RNDTIHLY--AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE--- 155
+ + I L A + +DYL K IIHRD+K +NI L E+ I DF +ATV
Sbjct: 128 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 187
Query: 156 NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
+ +SG+ ++APE+ + YS+ D ++ G+ L+E++ P+ SN +
Sbjct: 188 SHQFEQLSGSILWMAPEVIRMQDKNP--YSFQSDVYAFGIVLYELMTGQLPY---SNINN 242
Query: 216 KD 217
+D
Sbjct: 243 RD 244
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
A KN E+ +L H ++ L+ + + L +V+ G L +H+ + + T
Sbjct: 50 AFKN---EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHL------HIIET 99
Query: 101 RNDTIHLY--AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE--- 155
+ + I L A + +DYL K IIHRD+K +NI L E+ I DF +ATV
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159
Query: 156 NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
+ +SG+ ++APE+ + + YS+ D ++ G+ L+E++ P+ SN +
Sbjct: 160 SHQFEQLSGSILWMAPEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY---SNINN 214
Query: 216 KD 217
+D
Sbjct: 215 RD 216
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 18/187 (9%)
Query: 21 DTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF--QDEEDLFMVSD 78
+T + A+K + S D ++ RE++IL L F+V + L +V +
Sbjct: 37 NTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 93
Query: 79 LLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDE 138
L G LR + + + + LY+ ++ ++YL ++ +HRD+ NIL++
Sbjct: 94 YLPSGCLRDFLQR----HRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES 149
Query: 139 EGHAHITDFNIATV--LEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLG 194
E H I DF +A + L+++ G P + APE +D + +S D WS G
Sbjct: 150 EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL---SDNI--FSRQSDVWSFG 204
Query: 195 VTLFEIL 201
V L+E+
Sbjct: 205 VVLYELF 211
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --AGFVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 118
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 119 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 175
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 176 --AGFVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 216
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 20/182 (10%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
A KN E+ +L H ++ L+ + + L +V+ G L +H+ + + T
Sbjct: 55 AFKN---EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHL------HIIET 104
Query: 101 RNDTIHLY--AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE--- 155
+ + I L A + +DYL K IIHRD+K +NI L E+ I DF +ATV
Sbjct: 105 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 164
Query: 156 NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
+ +SG+ ++APE+ + + YS+ D ++ G+ L+E++ P+ SN +
Sbjct: 165 SHQFEQLSGSILWMAPEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY---SNINN 219
Query: 216 KD 217
+D
Sbjct: 220 RD 221
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 105/215 (48%), Gaps = 22/215 (10%)
Query: 10 GTSKVCIVQKKDTKQMY--AMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF 67
GT + +V+ + Y A+K M K + D + E +++ L H LV L+
Sbjct: 18 GTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEF---IEEAKVMMNLSHEKLVQLYGVC 73
Query: 68 QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAF--ELGLALDYLKTKHII 125
+ +F++++ + G L ++ + + R T L ++ A++YL++K +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLRE------MRHRFQTQQLLEMCKDVCEAMEYLESKQFL 127
Query: 126 HRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP--YIAPEIFLVATDEVLG 183
HRD+ N L++++G ++DF ++ + +++ +S P + PE+ + +
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSK----- 182
Query: 184 YSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVKD 217
+S D W+ GV ++EI + G+ P++ +N+ +
Sbjct: 183 FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 217
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --AGFVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 31 MHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI 89
M KS E+D L +++ EME++ + +H ++NL + L+++ + G+LR ++
Sbjct: 67 MLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
Query: 90 ----TQDIKFYSVGTRNDTIHLY-------AFELGLALDYLKTKHIIHRDIKPDNILLDE 138
++F + N L A+++ ++YL +K IHRD+ N+L+ E
Sbjct: 126 QARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 185
Query: 139 EGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGV 195
+ I DF +A + + + +G P ++APE D + Y++ D WS GV
Sbjct: 186 DNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALF---DRI--YTHQSDVWSFGV 240
Query: 196 TLFEILARG 204
L+EI G
Sbjct: 241 LLWEIFTLG 249
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I D+ +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 93/184 (50%), Gaps = 24/184 (13%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
A KN E+ +L H ++ L+ + + L +V+ G L +H+ + + T
Sbjct: 78 AFKN---EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHL------HIIET 127
Query: 101 RNDTIHLY--AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQL 158
+ + I L A + +DYL K IIHRD+K +NI L E+ I DF +AT E+++
Sbjct: 128 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT--EKSRW 185
Query: 159 ATS-----MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNT 213
+ S +SG+ ++APE+ + YS+ D ++ G+ L+E++ P+ SN
Sbjct: 186 SGSHQFEQLSGSILWMAPEVIRMQDKNP--YSFQSDVYAFGIVLYELMTGQLPY---SNI 240
Query: 214 SVKD 217
+ +D
Sbjct: 241 NNRD 244
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMS 163
I Y +E+ ALDY + I+HRD+KP N+L+D E + D+ +A Q
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 193 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 142
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 143 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 199
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 200 XGX--VATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 240
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 24/184 (13%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
A KN E+ +L H ++ L+ + + L +V+ G L +H+ + + T
Sbjct: 70 AFKN---EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHL------HIIET 119
Query: 101 RNDTIHLY--AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQL 158
+ + I L A + +DYL K IIHRD+K +NI L E+ I DF +AT E+++
Sbjct: 120 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT--EKSRW 177
Query: 159 ATS-----MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNT 213
+ S +SG+ ++APE+ + + YS+ D ++ G+ L+E++ P+ SN
Sbjct: 178 SGSHQFEQLSGSILWMAPEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY---SNI 232
Query: 214 SVKD 217
+ +D
Sbjct: 233 NNRD 236
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 94/184 (51%), Gaps = 24/184 (13%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
A KN E+ +L H ++ L+ + + L +V+ G L +H+ + + T
Sbjct: 50 AFKN---EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHL------HIIET 99
Query: 101 RNDTIHLY--AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQL 158
+ + I L A + +DYL K IIHRD+K +NI L E+ I DF +AT E+++
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT--EKSRW 157
Query: 159 ATS-----MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNT 213
+ S +SG+ ++APE+ + + YS+ D ++ G+ L+E++ P+ SN
Sbjct: 158 SGSHQFEQLSGSILWMAPEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY---SNI 212
Query: 214 SVKD 217
+ +D
Sbjct: 213 NNRD 216
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 16/180 (8%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
A KN E+ +L H ++ L+ + + L +V+ G L +H+ + +
Sbjct: 54 AFKN---EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKK 109
Query: 101 RNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE---NQ 157
D A + +DYL K IIHRD+K +NI L E+ I DF +ATV +
Sbjct: 110 LIDI----ARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSH 165
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKD 217
+SG+ ++APE+ + + YS+ D ++ G+ L+E++ P+ SN + +D
Sbjct: 166 QFEQLSGSILWMAPEV--IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRD 220
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 22/201 (10%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRND 103
+ LRE+ +L L+H +V L ++ L +V + QD+K Y D
Sbjct: 47 SALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF---------CDQDLKKYFDSCNGD 97
Query: 104 ----TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQL 158
+ + F+L L + +++++HRD+KP N+L++ G + +F +A +
Sbjct: 98 LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157
Query: 159 ATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDV 218
++ T Y P++ A YS S+D WS G E+ GRP + V D
Sbjct: 158 YSAEVVTLWYRPPDVLFGAK----LYSTSIDMWSAGCIFAELANAGRP--LFPGNDVDDQ 211
Query: 219 KAIIYSPVHYPT--AWSESTK 237
I+ + PT W TK
Sbjct: 212 LKRIFRLLGTPTEEQWPSMTK 232
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
A KN E+ +L H ++ L+ + L +V+ G L +H+ + + T
Sbjct: 50 AFKN---EVGVLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHL------HIIET 99
Query: 101 RNDTIHLY--AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE--- 155
+ + I L A + +DYL K IIHRD+K +NI L E+ I DF +ATV
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG 159
Query: 156 NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
+ +SG+ ++APE+ + + YS+ D ++ G+ L+E++ P+ SN +
Sbjct: 160 SHQFEQLSGSILWMAPEV--IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY---SNINN 214
Query: 216 KD 217
+D
Sbjct: 215 RD 216
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMS 163
I Y +E+ ALDY + I+HRD+KP N+++D E + D+ +A Q
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 193 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMS 163
I Y +E+ ALDY + I+HRD+KP N+++D E + D+ +A Q
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 193 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMS 163
I Y +E+ ALDY + I+HRD+KP N+++D E + D+ +A Q
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 193 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMS 163
I Y +E+ ALDY + I+HRD+KP N+++D E + D+ +A Q
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 193 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 82/163 (50%), Gaps = 9/163 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H ++ L F ++ L D+ + +L +++Q I+ +
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ Y APE+ L +GY +VD WS+G + E++ G
Sbjct: 185 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMS 163
I Y +E+ ALDY + I+HRD+KP N+++D E + D+ +A Q
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 193 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMS 163
I Y +E+ ALDY + I+HRD+KP N+++D E + D+ +A Q
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 193 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMS 163
I Y +E+ ALDY + I+HRD+KP N+++D E + D+ +A Q
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 191
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 192 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
A KN E+ +L H ++ L+ + + L +V+ G L +H+ + +
Sbjct: 66 AFKN---EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKK 121
Query: 101 RNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
D A + +DYL K IIHRD+K +NI L E+ I DF +AT E+++ +
Sbjct: 122 LIDI----ARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT--EKSRWSG 175
Query: 161 S-----MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
S +SG+ ++APE+ + YS+ D ++ G+ L+E++ P+ SN +
Sbjct: 176 SHQFEQLSGSILWMAPEVIRMQDSNP--YSFQSDVYAFGIVLYELMTGQLPY---SNINN 230
Query: 216 KD 217
+D
Sbjct: 231 RD 232
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMS 163
I Y +E+ ALDY + I+HRD+KP N+++D E + D+ +A Q
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 193 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMS 163
I Y +E+ ALDY + I+HRD+KP N+++D E + D+ +A Q
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 193 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMS 163
I Y +E+ ALDY + I+HRD+KP N+++D E + D+ +A Q
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 193 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 89 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 145
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I DF +A ++
Sbjct: 146 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 202
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 203 --XGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 243
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 25/185 (13%)
Query: 35 QCIERDALKNVLREMEILTT--LEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQD 92
QC + V R E++ L P +V L+ ++ + + +LL GG L + +
Sbjct: 120 QCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQ 179
Query: 93 IKFYSVGTRNDTIHLYAFELGL-ALDYLKTKHIIHRDIKPDNILLDEEG-HAHITDFNIA 150
G + LY L L+YL ++ I+H D+K DN+LL +G HA + DF A
Sbjct: 180 ------GCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHA 233
Query: 151 TVLEENQLATSM------SGTKPYIAPEIFLVATDEVLGYS--YSVDWWSLGVTLFEILA 202
L+ + L S+ GT+ ++APE+ VLG S VD WS + +L
Sbjct: 234 VCLQPDGLGKSLLTGDYIPGTETHMAPEV-------VLGRSCDAKVDVWSSCCMMLHMLN 286
Query: 203 RGRPF 207
P+
Sbjct: 287 GCHPW 291
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMS 163
I Y +E+ ALDY + I+HRD+KP N+++D E + D+ +A Q
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 192
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 193 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 12/170 (7%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEED--LFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
NV +E+++L L H ++ L +EE ++MV + + G + K + V
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQ- 110
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE---NQL 158
H Y +L L+YL ++ I+H+DIKP N+LL G I+ +A L +
Sbjct: 111 ---AHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDT 167
Query: 159 ATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFD 208
+ G+ + PEI D G + VD WS GVTL+ I PF+
Sbjct: 168 CRTSQGSPAFQPPEI-ANGLDTFSG--FKVDIWSAGVTLYNITTGLYPFE 214
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMS 163
I Y +E+ ALDY + I+HRD+KP N+++D E + D+ +A Q
Sbjct: 131 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 190
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 191 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKEPF 230
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMS 163
I Y +E+ ALDY + I+HRD+KP N+++D E + D+ +A Q
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 191
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 192 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E +I+ L+H LV L + EE +++V++ + G L +D + ++ N
Sbjct: 49 ESFLEEAQIMKKLKHDKLVQL-YAVVSEEPIYIVTEYMNKGSL-LDFLKDGEGRALKLPN 106
Query: 103 DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSM 162
+ A ++ + Y++ + IHRD++ NIL+ I DF +A ++E+N+
Sbjct: 107 --LVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQ 164
Query: 163 SGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
P + APE L ++ D WS G+ L E++ +GR P+ +N V
Sbjct: 165 GAKFPIKWTAPEAALYGR-----FTIKSDVWSFGILLTELVTKGRVPYPGMNNREV 215
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP ++ L + + +V++ + G L + + ++V
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV---- 146
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L G+A + YL +HRD+ NIL++ ++DF +A VLE++ A
Sbjct: 147 --IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA 204
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + +PE ++ + D WS G+ L+E+++ G RP+ SN V
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRK-----FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KA+ + P+ P A
Sbjct: 260 --IKAVDEGYRLPPPMDCPAA 278
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 48 EMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI-TQDIKFYSVGTRNDTIH 106
E+ +L H ++ L+ + +++L +V+ G L H+ Q+ KF +
Sbjct: 82 EVAVLRKTRHVNIL-LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLID---- 136
Query: 107 LYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE---NQLATSMS 163
A + +DYL K+IIHRD+K +NI L E I DF +ATV +Q +
Sbjct: 137 -IARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT 195
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
G+ ++APE+ + + +S+ D +S G+ L+E++ P+
Sbjct: 196 GSVLWMAPEVIRMQDNNP--FSFQSDVYSYGIVLYELMTGELPY 237
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATSMS 163
I Y +E+ ALDY + I+HRD+KP N+++D E + D+ +A Q
Sbjct: 138 IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV 197
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + + Y YS+D WSLG L ++ R PF
Sbjct: 198 ASRYFKGPELLV----DYQMYDYSLDMWSLGCMLASMIFRKEPF 237
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE-GHAHITDFNIATVLEENQLATSMS 163
I Y +EL ALDY ++ I+HRD+KP N+++D E + D+ +A +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + D Y YS+D WSLG ++ R PF
Sbjct: 187 ASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE-GHAHITDFNIATVLEENQLATSMS 163
I Y +EL ALDY ++ I+HRD+KP N+++D E + D+ +A +
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 187
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + D Y YS+D WSLG ++ R PF
Sbjct: 188 ASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 27 AMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR 86
A+K + + +A+ + +RE+ + +L+H L+ L+ + MV++L G L
Sbjct: 40 AVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL 98
Query: 87 YHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITD 146
+ + + +GT + YA ++ + YL++K IHRD+ N+LL I D
Sbjct: 99 DRLRKHQGHFLLGT----LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGD 154
Query: 147 FNIATVLEENQLATSMSGTK----PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILA 202
F + L +N M + + APE T +S++ D W GVTL+E+
Sbjct: 155 FGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT-----FSHASDTWMFGVTLWEMFT 209
Query: 203 RGRPFDIHSNTS 214
G+ I N S
Sbjct: 210 YGQEPWIGLNGS 221
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 22/201 (10%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRND 103
+ LRE+ +L L+H +V L ++ L +V + QD+K Y D
Sbjct: 47 SALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF---------CDQDLKKYFDSCNGD 97
Query: 104 ----TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQL 158
+ + F+L L + +++++HRD+KP N+L++ G + DF +A +
Sbjct: 98 LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC 157
Query: 159 ATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDV 218
++ T Y P++ A YS S+D WS G E+ RP + V D
Sbjct: 158 YSAEVVTLWYRPPDVLFGAK----LYSTSIDMWSAGCIFAELANAARP--LFPGNDVDDQ 211
Query: 219 KAIIYSPVHYPT--AWSESTK 237
I+ + PT W TK
Sbjct: 212 LKRIFRLLGTPTEEQWPSMTK 232
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE-GHAHITDFNIATVLEENQLATSMS 163
I Y +EL ALDY ++ I+HRD+KP N+++D E + D+ +A +
Sbjct: 129 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 188
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + D Y YS+D WSLG ++ R PF
Sbjct: 189 ASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPF 228
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDL----RYHITQDIKFYSV 98
++ L E I+ +HP ++ L +V++ + G L R H Q V
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQL 158
G +G + YL +HRD+ N+L+D ++DF ++ VLE++
Sbjct: 155 GMLRG--------VGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206
Query: 159 A--TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNT 213
A T+ G P + APE T +S + D WS GV ++E+LA G RP+ +N
Sbjct: 207 AAYTTTGGKIPIRWTAPEAIAFRT-----FSSASDVWSFGVVMWEVLAYGERPYWNMTNR 261
Query: 214 SV 215
V
Sbjct: 262 DV 263
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE-GHAHITDFNIATVLEENQLATSMS 163
I Y +EL ALDY ++ I+HRD+KP N+++D E + D+ +A +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + D Y YS+D WSLG ++ R PF
Sbjct: 187 ASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 12/114 (10%)
Query: 109 AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS-----MS 163
A + +DYL K IIHRD+K +NI L E+ I DF +AT E+++ + S +S
Sbjct: 126 ARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT--EKSRWSGSHQFEQLS 183
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKD 217
G+ ++APE+ + YS+ D ++ G+ L+E++ P+ SN + +D
Sbjct: 184 GSILWMAPEVIRMQDSNP--YSFQSDVYAFGIVLYELMTGQLPY---SNINNRD 232
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 27 AMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR 86
A+K + + +A+ + +RE+ + +L+H L+ L+ + MV++L G L
Sbjct: 50 AVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL 108
Query: 87 YHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITD 146
+ + + +GT + YA ++ + YL++K IHRD+ N+LL I D
Sbjct: 109 DRLRKHQGHFLLGT----LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGD 164
Query: 147 FNIATVLEENQLATSMSGTK----PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILA 202
F + L +N M + + APE T +S++ D W GVTL+E+
Sbjct: 165 FGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRT-----FSHASDTWMFGVTLWEMFT 219
Query: 203 RGRPFDIHSNTS 214
G+ I N S
Sbjct: 220 YGQEPWIGLNGS 231
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDL----RYHITQDIKFYSV 98
++ L E I+ +HP ++ L +V++ + G L R H Q V
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQL 158
G +G + YL +HRD+ N+L+D ++DF ++ VLE++
Sbjct: 155 GMLRG--------VGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206
Query: 159 A--TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNT 213
A T+ G P + APE T +S + D WS GV ++E+LA G RP+ +N
Sbjct: 207 AAXTTTGGKIPIRWTAPEAIAFRT-----FSSASDVWSFGVVMWEVLAYGERPYWNMTNR 261
Query: 214 SV 215
V
Sbjct: 262 DV 263
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE-GHAHITDFNIATVLEENQLATSMS 163
I Y +EL ALDY ++ I+HRD+KP N+++D E + D+ +A +
Sbjct: 128 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 187
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + D Y YS+D WSLG ++ R PF
Sbjct: 188 ASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPF 227
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE-GHAHITDFNIATVLEENQLATSMS 163
I Y +EL ALDY ++ I+HRD+KP N+++D E + D+ +A +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + D Y YS+D WSLG ++ R PF
Sbjct: 187 ASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE-GHAHITDFNIATVLEENQLATSMS 163
I Y +EL ALDY ++ I+HRD+KP N+++D E + D+ +A +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + D Y YS+D WSLG ++ R PF
Sbjct: 187 ASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP +++L + + ++++ + G L + ++ ++V
Sbjct: 75 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV---- 130
Query: 103 DTIHLYAF--ELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L +G + YL +HRD+ NIL++ ++DF ++ VLE++ A
Sbjct: 131 --IQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA 188
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + APE ++ + D WS G+ ++E+++ G RP+ SN V
Sbjct: 189 YTTRGGKIPIRWTAPEAIAYRK-----FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 243
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KAI + P+ P A
Sbjct: 244 --IKAIEEGYRLPPPMDCPIA 262
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H ++ L F ++ L D+ + +L +++Q I+ +
Sbjct: 68 KRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ Y APE+ L +GY +VD WS+G + E++ G
Sbjct: 185 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I F +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE-GHAHITDFNIATVLEENQLATSMS 163
I Y +EL ALDY ++ I+HRD+KP N+++D E + D+ +A +
Sbjct: 148 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 207
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + D Y YS+D WSLG ++ R PF
Sbjct: 208 ASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPF 247
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE-GHAHITDFNIATVLEENQLATSMS 163
I Y +EL ALDY ++ I+HRD+KP N+++D E + D+ +A +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + D Y YS+D WSLG ++ R PF
Sbjct: 187 ASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEE-GHAHITDFNIATVLEENQLATSMS 163
I Y +EL ALDY ++ I+HRD+KP N+++D E + D+ +A +
Sbjct: 127 IRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRV 186
Query: 164 GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
++ + PE+ + D Y YS+D WSLG ++ R PF
Sbjct: 187 ASRYFKGPELLVDLQD----YDYSLDMWSLGCMFAGMIFRKEPF 226
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 97/201 (48%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP +++L + + +V++ + G L + ++ ++V
Sbjct: 68 RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV---- 123
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L G++ + YL +HRD+ NIL++ ++DF ++ VLE++ A
Sbjct: 124 --IQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 181
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + APE ++ + D WS G+ ++E+++ G RP+ +N V
Sbjct: 182 YTTRGGKIPIRWTAPEAIAFRK-----FTSASDVWSYGIVMWEVVSYGERPYWEMTNQDV 236
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KA+ + SP+ P A
Sbjct: 237 --IKAVEEGYRLPSPMDCPAA 255
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP ++ L + + +V++ + G L + + ++V
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV---- 146
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L G+A + YL +HRD+ NIL++ ++DF ++ VLE++ A
Sbjct: 147 --IQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + +PE ++ + D WS G+ L+E+++ G RP+ SN V
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRK-----FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KA+ + P+ P A
Sbjct: 260 --IKAVDEGYRLPPPMDCPAA 278
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP ++ L + + +V++ + G L + + ++V
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV---- 117
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L G+A + YL +HRD+ NIL++ ++DF ++ VLE++ A
Sbjct: 118 --IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + +PE ++ + D WS G+ L+E+++ G RP+ SN V
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRK-----FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 230
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KA+ + P+ P A
Sbjct: 231 --IKAVDEGYRLPPPMDCPAA 249
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 31 MHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI 89
M KS E+D L +++ EME++ + +H ++NL + L+++ + G+LR ++
Sbjct: 59 MLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 117
Query: 90 ----TQDIKFYSVGTRNDTIHLY-------AFELGLALDYLKTKHIIHRDIKPDNILLDE 138
+++ + N L A+++ ++YL +K IHRD+ N+L+ E
Sbjct: 118 QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 177
Query: 139 EGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGV 195
+ I DF +A + + + +G P ++APE D + Y++ D WS GV
Sbjct: 178 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF---DRI--YTHQSDVWSFGV 232
Query: 196 TLFEILARG 204
L+EI G
Sbjct: 233 LLWEIFTLG 241
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 31 MHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI 89
M KS E+D L +++ EME++ + +H ++NL + L+++ + G+LR ++
Sbjct: 60 MLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 118
Query: 90 ----TQDIKFYSVGTRNDTIHLY-------AFELGLALDYLKTKHIIHRDIKPDNILLDE 138
+++ + N L A+++ ++YL +K IHRD+ N+L+ E
Sbjct: 119 QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 178
Query: 139 EGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGV 195
+ I DF +A + + + +G P ++APE D + Y++ D WS GV
Sbjct: 179 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF---DRI--YTHQSDVWSFGV 233
Query: 196 TLFEILARG 204
L+EI G
Sbjct: 234 LLWEIFTLG 242
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 31 MHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI 89
M KS E+D L +++ EME++ + +H ++NL + L+++ + G+LR ++
Sbjct: 56 MLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 114
Query: 90 ----TQDIKFYSVGTRNDTIHLY-------AFELGLALDYLKTKHIIHRDIKPDNILLDE 138
+++ + N L A+++ ++YL +K IHRD+ N+L+ E
Sbjct: 115 QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 174
Query: 139 EGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGV 195
+ I DF +A + + + +G P ++APE D + Y++ D WS GV
Sbjct: 175 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF---DRI--YTHQSDVWSFGV 229
Query: 196 TLFEILARG 204
L+EI G
Sbjct: 230 LLWEIFTLG 238
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H ++ L F ++ L D+ + +L +++Q I+ +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ Y APE+ L +GY +VD WS+G + E++ G
Sbjct: 185 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 27 AMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR 86
A+K + + +A+ + +RE+ + +L+H L+ L+ + MV++L G L
Sbjct: 44 AVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL 102
Query: 87 YHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITD 146
+ + + +GT + YA ++ + YL++K IHRD+ N+LL I D
Sbjct: 103 DRLRKHQGHFLLGT----LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGD 158
Query: 147 FNIATVLEENQLATSMSGTK----PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILA 202
F + L +N M + + APE T +S++ D W GVTL+E+
Sbjct: 159 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT-----FSHASDTWMFGVTLWEMFT 213
Query: 203 RGRPFDIHSNTS 214
G+ I N S
Sbjct: 214 YGQEPWIGLNGS 225
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 31 MHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI 89
M KS E+D L +++ EME++ + +H ++NL + L+++ + G+LR ++
Sbjct: 67 MLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
Query: 90 ----TQDIKFYSVGTRNDTIHLY-------AFELGLALDYLKTKHIIHRDIKPDNILLDE 138
+++ + N L A+++ ++YL +K IHRD+ N+L+ E
Sbjct: 126 QAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 185
Query: 139 EGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGV 195
+ I DF +A + + + +G P ++APE D + Y++ D WS GV
Sbjct: 186 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF---DRI--YTHQSDVWSFGV 240
Query: 196 TLFEILARG 204
L+EI G
Sbjct: 241 LLWEIFTLG 249
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP ++ L + + +V++ + G L + + ++V
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV---- 146
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L G+A + YL +HRD+ NIL++ ++DF ++ VLE++ A
Sbjct: 147 --IQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + +PE ++ + D WS G+ L+E+++ G RP+ SN V
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRK-----FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KA+ + P+ P A
Sbjct: 260 --IKAVDEGYRLPPPMDCPAA 278
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNV-LREMEILTTLEHPFLVNLWFCFQ 68
GT V + + + +A+K + + E + + + +RE+ IL L+H +V L+
Sbjct: 13 GTYGVVYKAQNNYGETFALKKIRLEK--EDEGIPSTTIREISILKELKHSNIVKLYDVIH 70
Query: 69 DEEDLFMVSDLLLGGDLRYHITQDIK----FYSVGTRNDTIHLYAFELGLALDYLKTKHI 124
++ L +V + H+ QD+K G + T + +L + Y + +
Sbjct: 71 TKKRLVLVFE---------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 125 IHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+HRD+KP N+L++ EG I DF +A + T T Y AP++ + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK---- 177
Query: 184 YSYSVDWWSLGVTLFEILARGRPF 207
YS ++D WS+G +F + G P
Sbjct: 178 YSTTIDIWSVGC-IFAEMVNGAPL 200
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 31 MHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI 89
M KS E+D L +++ EME++ + +H ++NL + L+++ + G+LR ++
Sbjct: 67 MLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
Query: 90 ----TQDIKFYSVGTRNDTIHLY-------AFELGLALDYLKTKHIIHRDIKPDNILLDE 138
+++ + N L A+++ ++YL +K IHRD+ N+L+ E
Sbjct: 126 QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 185
Query: 139 EGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGV 195
+ I DF +A + + + +G P ++APE D + Y++ D WS GV
Sbjct: 186 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF---DRI--YTHQSDVWSFGV 240
Query: 196 TLFEILARG 204
L+EI G
Sbjct: 241 LLWEIFTLG 249
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 27 AMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR 86
A+K + + +A+ + +RE+ + +L+H L+ L+ + MV++L G L
Sbjct: 40 AVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL 98
Query: 87 YHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITD 146
+ + + +GT + YA ++ + YL++K IHRD+ N+LL I D
Sbjct: 99 DRLRKHQGHFLLGT----LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGD 154
Query: 147 FNIATVLEENQLATSMSGTK----PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILA 202
F + L +N M + + APE T +S++ D W GVTL+E+
Sbjct: 155 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT-----FSHASDTWMFGVTLWEMFT 209
Query: 203 RGRPFDIHSNTS 214
G+ I N S
Sbjct: 210 YGQEPWIGLNGS 221
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP +++L + + ++++ + G L + ++ ++V
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV---- 109
Query: 103 DTIHLYAF--ELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L +G + YL +HRD+ NIL++ ++DF ++ VLE++ A
Sbjct: 110 --IQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA 167
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + APE ++ + D WS G+ ++E+++ G RP+ SN V
Sbjct: 168 YTTRGGKIPIRWTAPEAIAYRK-----FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 222
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KAI + P+ P A
Sbjct: 223 --IKAIEEGYRLPPPMDCPIA 241
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP +++L + + ++++ + G L + ++ ++V
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTV---- 115
Query: 103 DTIHLYAF--ELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L +G + YL +HRD+ NIL++ ++DF ++ VLE++ A
Sbjct: 116 --IQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA 173
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + APE ++ + D WS G+ ++E+++ G RP+ SN V
Sbjct: 174 YTTRGGKIPIRWTAPEAIAYRK-----FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 228
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KAI + P+ P A
Sbjct: 229 --IKAIEEGYRLPPPMDCPIA 247
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 27 AMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR 86
A+K + + +A+ + +RE+ + +L+H L+ L+ + MV++L G L
Sbjct: 40 AVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL 98
Query: 87 YHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITD 146
+ + + +GT + YA ++ + YL++K IHRD+ N+LL I D
Sbjct: 99 DRLRKHQGHFLLGT----LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGD 154
Query: 147 FNIATVLEENQLATSMSGTK----PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILA 202
F + L +N M + + APE T +S++ D W GVTL+E+
Sbjct: 155 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT-----FSHASDTWMFGVTLWEMFT 209
Query: 203 RGRPFDIHSNTS 214
G+ I N S
Sbjct: 210 YGQEPWIGLNGS 221
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 27 AMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR 86
A+K + + +A+ + +RE+ + +L+H L+ L+ + MV++L G L
Sbjct: 44 AVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL 102
Query: 87 YHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITD 146
+ + + +GT + YA ++ + YL++K IHRD+ N+LL I D
Sbjct: 103 DRLRKHQGHFLLGT----LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGD 158
Query: 147 FNIATVLEENQLATSMSGTK----PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILA 202
F + L +N M + + APE T +S++ D W GVTL+E+
Sbjct: 159 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT-----FSHASDTWMFGVTLWEMFT 213
Query: 203 RGRPFDIHSNTS 214
G+ I N S
Sbjct: 214 YGQEPWIGLNGS 225
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I D +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNV-LREMEILTTLEHPFLVNLWFCFQ 68
GT V + + + +A+K + + E + + + +RE+ IL L+H +V L+
Sbjct: 13 GTYGVVYKAQNNYGETFALKKIRLEK--EDEGIPSTTIREISILKELKHSNIVKLYDVIH 70
Query: 69 DEEDLFMVSDLLLGGDLRYHITQDIK----FYSVGTRNDTIHLYAFELGLALDYLKTKHI 124
++ L +V + H+ QD+K G + T + +L + Y + +
Sbjct: 71 TKKRLVLVFE---------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 125 IHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+HRD+KP N+L++ EG I DF +A + T T Y AP++ + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKK---- 177
Query: 184 YSYSVDWWSLGVTLFEILARGRPF 207
YS ++D WS+G +F + G P
Sbjct: 178 YSTTIDIWSVGC-IFAEMVNGTPL 200
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP ++ L + + +V++ + G L + + ++V
Sbjct: 79 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV---- 134
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L G+A + YL +HRD+ NIL++ ++DF ++ VLE++ A
Sbjct: 135 --IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 192
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + +PE ++ + D WS G+ L+E+++ G RP+ SN V
Sbjct: 193 YTTRGGKIPIRWTSPEAIAYRK-----FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 247
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KA+ + P+ P A
Sbjct: 248 --IKAVDEGYRLPPPMDCPAA 266
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Query: 38 ERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS 97
+ + LK RE+ + L H +V++ ++++ ++V + + G L +I
Sbjct: 51 KEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSV 110
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKH---IIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
N T + LD +K H I+HRDIKP NIL+D I DF IA L
Sbjct: 111 DTAINFTNQI--------LDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162
Query: 155 ENQLATS--MSGTKPYIAPEIFL-VATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHS 211
E L + + GT Y +PE ATDE D +S+G+ L+E+L PF+ +
Sbjct: 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDEC------TDIYSIGIVLYEMLVGEPPFNGET 216
Query: 212 NTSV 215
S+
Sbjct: 217 AVSI 220
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 31 MHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI 89
M KS E+D L +++ EME++ + +H ++NL + L+++ + G+LR ++
Sbjct: 108 MLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 166
Query: 90 ----TQDIKFYSVGTRNDTIHLY-------AFELGLALDYLKTKHIIHRDIKPDNILLDE 138
+++ + N L A+++ ++YL +K IHRD+ N+L+ E
Sbjct: 167 QARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 226
Query: 139 EGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGV 195
+ I DF +A + + + +G P ++APE D + Y++ D WS GV
Sbjct: 227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF---DRI--YTHQSDVWSFGV 281
Query: 196 TLFEILARG 204
L+EI G
Sbjct: 282 LLWEIFTLG 290
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP ++ L + + +V++ + G L + + ++V
Sbjct: 62 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV---- 117
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L G+A + YL +HRD+ NIL++ ++DF ++ VLE++ A
Sbjct: 118 --IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + +PE ++ + D WS G+ L+E+++ G RP+ SN V
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRK-----FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 230
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KA+ + P+ P A
Sbjct: 231 --IKAVDEGYRLPPPMDCPAA 249
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 31 MHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI 89
M KS E+D L +++ EME++ + +H ++NL + L+++ + G+LR ++
Sbjct: 67 MLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
Query: 90 ----TQDIKFYSVGTRNDTIHLY-------AFELGLALDYLKTKHIIHRDIKPDNILLDE 138
+++ + N L A+++ ++YL +K IHRD+ N+L+ E
Sbjct: 126 QARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 185
Query: 139 EGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGV 195
+ I DF +A + + + +G P ++APE D + Y++ D WS GV
Sbjct: 186 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF---DRI--YTHQSDVWSFGV 240
Query: 196 TLFEILARG 204
L+EI G
Sbjct: 241 LLWEIFTLG 249
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 19/185 (10%)
Query: 40 DALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGD-LRYHITQDIKFYSV 98
D L+E IL HP +V L ++ +++V +L+ GGD L + T+ +
Sbjct: 154 DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARL--- 210
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQL 158
R T+ + ++YL++K IHRD+ N L+ E+ I+DF ++ EE
Sbjct: 211 --RVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR--EEADG 266
Query: 159 ATSMSG-----TKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSN 212
+ SG + APE YS D WS G+ L+E + G P+ SN
Sbjct: 267 VXAASGGLRQVPVKWTAPEALNYGR-----YSSESDVWSFGILLWETFSLGASPYPNLSN 321
Query: 213 TSVKD 217
++
Sbjct: 322 QQTRE 326
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ +L + H +++L F ++ L D+ L +L ++ Q I +
Sbjct: 66 KRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIH---MELD 122
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A N + T
Sbjct: 123 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTP 182
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 183 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGELV 217
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP ++ L + + +V++ + G L + + ++V
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV---- 146
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L G+A + YL +HRD+ NIL++ ++DF ++ VLE++ A
Sbjct: 147 --IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + +PE ++ + D WS G+ L+E+++ G RP+ SN V
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRK-----FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KA+ + P+ P A
Sbjct: 260 --IKAVDEGYRLPPPMDCPAA 278
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I D +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 14/192 (7%)
Query: 27 AMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR 86
A+K + + +A+ + +RE+ + +L+H L+ L+ + MV++L G L
Sbjct: 50 AVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLL 108
Query: 87 YHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITD 146
+ + + +GT + YA ++ + YL++K IHRD+ N+LL I D
Sbjct: 109 DRLRKHQGHFLLGT----LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGD 164
Query: 147 FNIATVLEENQLATSMSGTK----PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILA 202
F + L +N M + + APE T +S++ D W GVTL+E+
Sbjct: 165 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRT-----FSHASDTWMFGVTLWEMFT 219
Query: 203 RGRPFDIHSNTS 214
G+ I N S
Sbjct: 220 YGQEPWIGLNGS 231
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 92/189 (48%), Gaps = 21/189 (11%)
Query: 31 MHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI 89
M KS E+D L +++ EME++ + +H ++NL + L+++ + G+LR ++
Sbjct: 52 MLKSDATEKD-LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 110
Query: 90 ----TQDIKFYSVGTRNDTIHLY-------AFELGLALDYLKTKHIIHRDIKPDNILLDE 138
+++ + N L A+++ ++YL +K IHRD+ N+L+ E
Sbjct: 111 QARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE 170
Query: 139 EGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGV 195
+ I DF +A + + + +G P ++APE D + Y++ D WS GV
Sbjct: 171 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF---DRI--YTHQSDVWSFGV 225
Query: 196 TLFEILARG 204
L+EI G
Sbjct: 226 LLWEIFTLG 234
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ +L + H +++L F ++ L D+ L +L ++ Q I +
Sbjct: 68 KRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---HMELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A N + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY+ +VD WS+G + E++
Sbjct: 185 YVVTRYYRAPEVIL-----GMGYAANVDIWSVGCIMGELV 219
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDL-----LLGGDLRYHITQDIKFYS 97
K RE+ +L ++H ++ L F L +D+ L+G DL +I + K
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN-NIVKCQKL-- 122
Query: 98 VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ 157
+D + +++ L Y+ + IIHRD+KP N+ ++E+ I D +A ++
Sbjct: 123 ---TDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEM 179
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR 205
T T+ Y APEI L + Y+ +VD WS+G + E+L GR
Sbjct: 180 --TGYVATRWYRAPEIML----NWMHYNQTVDIWSVGCIMAELLT-GR 220
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP ++ L + + +V++ + G L + + ++V
Sbjct: 89 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV---- 144
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L G+A + YL +HRD+ NIL++ ++DF ++ VLE++ A
Sbjct: 145 --IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 202
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + +PE ++ + D WS G+ L+E+++ G RP+ SN V
Sbjct: 203 YTTRGGKIPIRWTSPEAIAYRK-----FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 257
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KA+ + P+ P A
Sbjct: 258 --IKAVDEGYRLPPPMDCPAA 276
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 21/183 (11%)
Query: 35 QCIERDALKNVLREMEILTT--LEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQD 92
QC + V R E++ L P +V L+ ++ + + +LL GG L I Q
Sbjct: 85 QCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ- 143
Query: 93 IKFYSVGTRNDTIHLYAFELGL-ALDYLKTKHIIHRDIKPDNILLDEEG-HAHITDFNIA 150
+G + LY L L+YL T+ I+H D+K DN+LL +G A + DF A
Sbjct: 144 -----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA 198
Query: 151 TVLEENQLATSM------SGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
L+ + L S+ GT+ ++APE+ + + VD WS + +L
Sbjct: 199 LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA-----KVDIWSSCCMMLHMLNGC 253
Query: 205 RPF 207
P+
Sbjct: 254 HPW 256
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP ++ L + + +V++ + G L + + ++V
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV---- 146
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L G+A + YL +HRD+ NIL++ ++DF ++ VLE++ A
Sbjct: 147 --IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + +PE ++ + D WS G+ L+E+++ G RP+ SN V
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRK-----FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KA+ + P+ P A
Sbjct: 260 --IKAVDEGYRLPPPMDCPAA 278
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP ++ L + + +V++ + G L + + ++V
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV---- 146
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L G+A + YL +HRD+ NIL++ ++DF ++ VLE++ A
Sbjct: 147 --IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + +PE ++ + D WS G+ L+E+++ G RP+ SN V
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRK-----FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KA+ + P+ P A
Sbjct: 260 --IKAVDEGYRLPPPMDCPAA 278
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNV-LREMEILTTLEHPFLVNLWFCFQ 68
GT V + + + +A+K + + E + + + +RE+ IL L+H +V L+
Sbjct: 13 GTYGVVYKAQNNYGETFALKKIRLEK--EDEGIPSTTIREISILKELKHSNIVKLYDVIH 70
Query: 69 DEEDLFMVSDLLLGGDLRYHITQDIK----FYSVGTRNDTIHLYAFELGLALDYLKTKHI 124
++ L +V + H+ QD+K G + T + +L + Y + +
Sbjct: 71 TKKRLVLVFE---------HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 125 IHRDIKPDNILLDEEGHAHITDFNIATVLE-ENQLATSMSGTKPYIAPEIFLVATDEVLG 183
+HRD+KP N+L++ EG I DF +A + T T Y AP++ + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK---- 177
Query: 184 YSYSVDWWSLGVTLFEILARGRPF 207
YS ++D WS+G +F + G P
Sbjct: 178 YSTTIDIWSVGC-IFAEMVNGTPL 200
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP ++ L + + +V++ + G L + + ++V
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV---- 146
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L G+A + YL +HRD+ NIL++ ++DF ++ VLE++ A
Sbjct: 147 --IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + +PE ++ + D WS G+ L+E+++ G RP+ SN V
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRK-----FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KA+ + P+ P A
Sbjct: 260 --IKAVDEGYRLPPPMDCPAA 278
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP ++ L + + +V++ + G L + + ++V
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV---- 146
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L G+A + YL +HRD+ NIL++ ++DF + VLE++ A
Sbjct: 147 --IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + +PE ++ + D WS G+ L+E+++ G RP+ SN V
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRK-----FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KA+ + P+ P A
Sbjct: 260 --IKAVDEGYRLPPPMDCPAA 278
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 25/201 (12%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP ++ L + + +V++ + G L + + ++V
Sbjct: 91 RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV---- 146
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L G+A + YL +HRD+ NIL++ ++DF ++ VLE++ A
Sbjct: 147 --IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + +PE ++ + D WS G+ L+E+++ G RP+ SN V
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRK-----FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV 259
Query: 216 KDVKAI-----IYSPVHYPTA 231
+KA+ + P+ P A
Sbjct: 260 --IKAVDEGYRLPPPMDCPAA 278
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 21/183 (11%)
Query: 35 QCIERDALKNVLREMEILTT--LEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQD 92
QC + V R E++ L P +V L+ ++ + + +LL GG L I Q
Sbjct: 99 QCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ- 157
Query: 93 IKFYSVGTRNDTIHLYAFELGL-ALDYLKTKHIIHRDIKPDNILLDEEG-HAHITDFNIA 150
+G + LY L L+YL T+ I+H D+K DN+LL +G A + DF A
Sbjct: 158 -----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA 212
Query: 151 TVLEENQLATSM------SGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
L+ + L S+ GT+ ++APE+ + + VD WS + +L
Sbjct: 213 LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA-----KVDIWSSCCMMLHMLNGC 267
Query: 205 RPF 207
P+
Sbjct: 268 HPW 270
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 19/185 (10%)
Query: 40 DALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGD-LRYHITQDIKFYSV 98
D L+E IL HP +V L ++ +++V +L+ GGD L + T+ +
Sbjct: 154 DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARL--- 210
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQL 158
R T+ + ++YL++K IHRD+ N L+ E+ I+DF ++ EE
Sbjct: 211 --RVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR--EEADG 266
Query: 159 ATSMSG-----TKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSN 212
+ SG + APE YS D WS G+ L+E + G P+ SN
Sbjct: 267 VYAASGGLRQVPVKWTAPEALNYGR-----YSSESDVWSFGILLWETFSLGASPYPNLSN 321
Query: 213 TSVKD 217
++
Sbjct: 322 QQTRE 326
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 21/183 (11%)
Query: 35 QCIERDALKNVLREMEILTT--LEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQD 92
QC + V R E++ L P +V L+ ++ + + +LL GG L I Q
Sbjct: 101 QCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ- 159
Query: 93 IKFYSVGTRNDTIHLYAFELGL-ALDYLKTKHIIHRDIKPDNILLDEEG-HAHITDFNIA 150
+G + LY L L+YL T+ I+H D+K DN+LL +G A + DF A
Sbjct: 160 -----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA 214
Query: 151 TVLEENQLATSM------SGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
L+ + L S+ GT+ ++APE+ + + VD WS + +L
Sbjct: 215 LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA-----KVDIWSSCCMMLHMLNGC 269
Query: 205 RPF 207
P+
Sbjct: 270 HPW 272
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 105/243 (43%), Gaps = 51/243 (20%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLR---EMEILTTLEHPFLVNLWFC 66
G +V I + T+ + A+K M+K++ I + K+V R E+ ++ L HP + L+
Sbjct: 40 GVVRVAI--ENQTRAIRAIKIMNKNK-IRQINPKDVERIKTEVRLMKKLHHPNIARLYEV 96
Query: 67 FQDEEDLFMVSDLLLGGDLRYHI-------TQDIKFYSVGTR------------NDTIHL 107
++DE+ + +V +L GG L + T V T+ N +IH
Sbjct: 97 YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHG 156
Query: 108 YAFELGL----------------ALDYLKTKHIIHRDIKPDNILL--DEEGHAHITDFNI 149
+ L AL YL + I HRDIKP+N L ++ + DF +
Sbjct: 157 FRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGL 216
Query: 150 ATVL-----EENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ E T+ +GT ++APE+ L T+E Y D WS GV L +L
Sbjct: 217 SKEFYKLNNGEYYGMTTKAGTPYFVAPEV-LNTTNE--SYGPKCDAWSAGVLLHLLLMGA 273
Query: 205 RPF 207
PF
Sbjct: 274 VPF 276
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H ++ L F ++ L D+ + +L +++Q I+ +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ Y APE+ L +GY +VD WS+G + E++ G
Sbjct: 185 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVGTRND 103
L E ++ L+H LV L + +E ++++++ + G L IK T N
Sbjct: 64 LAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL----TINK 118
Query: 104 TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
+ + A ++ + +++ ++ IHRD++ NIL+ + I DF +A ++E+N+ T+
Sbjct: 119 LLDMAA-QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTARE 176
Query: 164 GTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
G K + APE T ++ D WS G+ L EI+ GR P+ +N V
Sbjct: 177 GAKFPIKWTAPEAINYGT-----FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 227
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 35 QCIERDALKNVLREMEILTT--LEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQD 92
QC + V R E++ L P +V L+ ++ + + +LL GG L + +
Sbjct: 101 QCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQ 160
Query: 93 IKFYSVGTRNDTIHLYAFELGL-ALDYLKTKHIIHRDIKPDNILLDEEG-HAHITDFNIA 150
G + LY L L+YL ++ I+H D+K DN+LL +G HA + DF A
Sbjct: 161 ------GCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHA 214
Query: 151 TVLEENQLATSM------SGTKPYIAPEIFLVATDEVLGYS--YSVDWWSLGVTLFEILA 202
L+ + L + GT+ ++APE+ VLG S VD WS + +L
Sbjct: 215 VCLQPDGLGKDLLTGDYIPGTETHMAPEV-------VLGRSCDAKVDVWSSCCMMLHMLN 267
Query: 203 RGRPF 207
P+
Sbjct: 268 GCHPW 272
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 122 KHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
K+I HRD+KP NIL+D+ G ++DF + + + ++ S GT ++ PE F ++E
Sbjct: 171 KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGS-RGTYEFMPPEFF---SNES 226
Query: 182 LGYSYSVDWWSLGVTLFEILARGRPFDI 209
VD WSLG+ L+ + PF +
Sbjct: 227 SYNGAKVDIWSLGICLYVMFYNVVPFSL 254
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVGTRND 103
L E ++ L+H LV L + +E ++++++ + G L IK T N
Sbjct: 62 LAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL----TINK 116
Query: 104 TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
+ + A ++ + +++ ++ IHRD++ NIL+ + I DF +A ++E+N+ T+
Sbjct: 117 LLDMAA-QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTARE 174
Query: 164 GTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
G K + APE T ++ D WS G+ L EI+ GR P+ +N V
Sbjct: 175 GAKFPIKWTAPEAINYGT-----FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVGTRND 103
L E ++ L+H LV L + +E ++++++ + G L IK T N
Sbjct: 56 LAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL----TINK 110
Query: 104 TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
+ + A ++ + +++ ++ IHRD++ NIL+ + I DF +A ++E+N+ T+
Sbjct: 111 LLDMAA-QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTARE 168
Query: 164 GTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
G K + APE T ++ D WS G+ L EI+ GR P+ +N V
Sbjct: 169 GAKFPIKWTAPEAINYGT-----FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVGTRND 103
L E ++ L+H LV L + +E ++++++ + G L IK T N
Sbjct: 56 LAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL----TINK 110
Query: 104 TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
+ + A ++ + +++ ++ IHRD++ NIL+ + I DF +A ++E+N+ T+
Sbjct: 111 LLDMAA-QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTARE 168
Query: 164 GTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
G K + APE T ++ D WS G+ L EI+ GR P+ +N V
Sbjct: 169 GAKFPIKWTAPEAINYGT-----FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVGTRND 103
L E ++ L+H LV L + +E ++++++ + G L IK T N
Sbjct: 57 LAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL----TINK 111
Query: 104 TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
+ + A ++ + +++ ++ IHRD++ NIL+ + I DF +A ++E+N+ T+
Sbjct: 112 LLDMAA-QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTARE 169
Query: 164 GTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
G K + APE T ++ D WS G+ L EI+ GR P+ +N V
Sbjct: 170 GAKFPIKWTAPEAINYGT-----FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 220
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
+ L E I+ EHP ++ L + + ++++ + G L + + ++V
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV---- 115
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQ--- 157
I L G+A + YL +HRD+ NIL++ ++DF ++ LEEN
Sbjct: 116 --IQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 173
Query: 158 -LATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNT 213
+S+ G P + APE ++ + D WS G+ ++E+++ G RP+ SN
Sbjct: 174 TYTSSLGGKIPIRWTAPEAIAFRK-----FTSASDAWSYGIVMWEVMSFGERPYWDMSNQ 228
Query: 214 SV 215
V
Sbjct: 229 DV 230
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 17/146 (11%)
Query: 68 QDEEDLFMVSDLLLGGDLRYHITQDIKFYSV------------GTRNDTIHLYAFELGLA 115
QD+++ V +L R HI + S+ G + +A +
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFL 175
LD L IIH D+KP+NILL ++G + I + + E+Q + ++ Y APE+ L
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVIL 272
Query: 176 VATDEVLGYSYSVDWWSLGVTLFEIL 201
A Y +D WSLG L E+L
Sbjct: 273 GAR-----YGMPIDMWSLGCILAELL 293
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVGTRND 103
L E ++ L+H LV L + +E ++++++ + G L IK T N
Sbjct: 58 LAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL----TINK 112
Query: 104 TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
+ + A ++ + +++ ++ IHRD++ NIL+ + I DF +A ++E+N+ T+
Sbjct: 113 LLDMAA-QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTARE 170
Query: 164 GTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
G K + APE T ++ D WS G+ L EI+ GR P+ +N V
Sbjct: 171 GAKFPIKWTAPEAINYGT-----FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 221
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVGTRND 103
L E ++ L+H LV L + +E ++++++ + G L IK T N
Sbjct: 65 LAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL----TINK 119
Query: 104 TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
+ + A ++ + +++ ++ IHRD++ NIL+ + I DF +A ++E+N+ T+
Sbjct: 120 LLDMAA-QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-XTARE 177
Query: 164 GTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
G K + APE T ++ D WS G+ L EI+ GR P+ +N V
Sbjct: 178 GAKFPIKWTAPEAINYGT-----FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 228
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIF 174
+DY+ +K +IHRD+KP NI L + I DF + T L+ + T GT Y++PE
Sbjct: 148 GVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQ- 206
Query: 175 LVATDEVLGYSYSVDWWSLGVTLFEIL 201
+ + D Y VD ++LG+ L E+L
Sbjct: 207 ISSQD----YGKEVDLYALGLILAELL 229
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 17/146 (11%)
Query: 68 QDEEDLFMVSDLLLGGDLRYHITQDIKFYSV------------GTRNDTIHLYAFELGLA 115
QD+++ V +L R HI + S+ G + +A +
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFL 175
LD L IIH D+KP+NILL ++G + I + + E+Q + ++ Y APE+ L
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVIL 272
Query: 176 VATDEVLGYSYSVDWWSLGVTLFEIL 201
A Y +D WSLG L E+L
Sbjct: 273 GAR-----YGMPIDMWSLGCILAELL 293
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVGTRND 103
L E ++ L+H LV L + +E ++++++ + G L IK T N
Sbjct: 66 LAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL----TINK 120
Query: 104 TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
+ + A ++ + +++ ++ IHRD++ NIL+ + I DF +A ++E+N+
Sbjct: 121 LLDMAA-QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 179
Query: 164 GTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
P + APE T ++ D WS G+ L EI+ GR P+ +N V
Sbjct: 180 AKFPIKWTAPEAINYGT-----FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 229
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H ++ L F ++ L D+ + +L ++ Q I+ +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ Y APE+ L +GY +VD WS+G + E++ G
Sbjct: 185 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVGTRND 103
L E ++ L+H LV L + +E ++++++ + G L IK T N
Sbjct: 62 LAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL----TINK 116
Query: 104 TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
+ + A ++ + +++ ++ IHRD++ NIL+ + I DF +A ++E+N+ T+
Sbjct: 117 LLDMAA-QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TARE 174
Query: 164 GTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
G K + APE T ++ D WS G+ L EI+ GR P+ +N V
Sbjct: 175 GAKFPIKWTAPEAINYGT-----FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVGTRND 103
L E ++ L+H LV L + +E ++++++ + G L IK T N
Sbjct: 61 LAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL----TINK 115
Query: 104 TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
+ + A ++ + +++ ++ IHRD++ NIL+ + I DF +A ++E+N+ T+
Sbjct: 116 LLDMAA-QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TARE 173
Query: 164 GTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
G K + APE T ++ D WS G+ L EI+ GR P+ +N V
Sbjct: 174 GAKFPIKWTAPEAINYGT-----FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 224
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVGTRND 103
L E ++ L+H LV L + +E ++++++ + G L IK T N
Sbjct: 51 LAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL----TINK 105
Query: 104 TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
+ + A ++ + +++ ++ IHRD++ NIL+ + I DF +A ++E+N+ T+
Sbjct: 106 LLDMAA-QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TARE 163
Query: 164 GTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
G K + APE T ++ D WS G+ L EI+ GR P+ +N V
Sbjct: 164 GAKFPIKWTAPEAINYGT-----FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 214
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H ++ L F ++ L D+ + +L ++ Q I+ +
Sbjct: 69 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELD 125
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 185
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ Y APE+ L +GY +VD WS+G + E++ G
Sbjct: 186 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMIKGG 223
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVGTRND 103
L E ++ L+H LV L + +E ++++++ + G L IK T N
Sbjct: 56 LAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL----TINK 110
Query: 104 TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
+ + A ++ + +++ ++ IHRD++ NIL+ + I DF +A ++E+N+ T+
Sbjct: 111 LLDMAA-QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TARE 168
Query: 164 GTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
G K + APE T ++ D WS G+ L EI+ GR P+ +N V
Sbjct: 169 GAKFPIKWTAPEAINYGT-----FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H ++ L F ++ L D+ + +L ++ Q I+ +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ Y APE+ L +GY +VD WS+G + E++ G
Sbjct: 185 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H ++ L F ++ L D+ + +L ++ Q I+ +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ Y APE+ L +GY +VD WS+G + E++ G
Sbjct: 185 EVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMIKGG 222
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 18/147 (12%)
Query: 73 LFMVSDLLLGGDLRYHITQ--DIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIK 130
L ++ + + GG+L I + D F T + + ++G A+ +L + +I HRD+K
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAF----TEREAAEIMR-DIGTAIQFLHSHNIAHRDVK 155
Query: 131 PDNILL---DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYS 187
P+N+L +++ +TDF A +N L T T Y+APE+ Y S
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY-TPYYVAPEVLGPEK-----YDKS 209
Query: 188 VDWWSLGVTLFEILARGRPFDIHSNTS 214
D WSLGV ++ +L PF +SNT
Sbjct: 210 CDMWSLGVIMYILLCGFPPF--YSNTG 234
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H +++L F ++ L D+ L +L ++ Q I+ +
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELD 162
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 222
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 223 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 257
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 68 QDEEDLFMVSDLLLGGDLRYHITQDIKFYSV------------GTRNDTIHLYAFELGLA 115
QD+++ V +L R HI + S+ G + +A +
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 116 LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFL 175
LD L IIH D+KP+NILL ++G + I + + E+Q ++ Y APE+ L
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVIL 272
Query: 176 VATDEVLGYSYSVDWWSLGVTLFEIL 201
A Y +D WSLG L E+L
Sbjct: 273 GAR-----YGMPIDMWSLGCILAELL 293
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 18/147 (12%)
Query: 73 LFMVSDLLLGGDLRYHITQ--DIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIK 130
L ++ + + GG+L I + D F T + + ++G A+ +L + +I HRD+K
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAF----TEREAAEIMR-DIGTAIQFLHSHNIAHRDVK 136
Query: 131 PDNILL---DEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYS 187
P+N+L +++ +TDF A +N L T T Y+APE+ Y S
Sbjct: 137 PENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY-TPYYVAPEVLGPEK-----YDKS 190
Query: 188 VDWWSLGVTLFEILARGRPFDIHSNTS 214
D WSLGV ++ +L PF +SNT
Sbjct: 191 CDMWSLGVIMYILLCGFPPF--YSNTG 215
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
+ L E I+ EHP ++ L + + ++++ + G L + + ++V
Sbjct: 62 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV---- 117
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQL-- 158
I L G+A + YL +HRD+ NIL++ ++DF ++ LEEN
Sbjct: 118 --IQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP 175
Query: 159 --ATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNT 213
+S+ G P + APE ++ + D WS G+ ++E+++ G RP+ SN
Sbjct: 176 TETSSLGGKIPIRWTAPEAIAFRK-----FTSASDAWSYGIVMWEVMSFGERPYWDMSNQ 230
Query: 214 SV 215
V
Sbjct: 231 DV 232
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H +++L F ++ L D+ L +L ++ Q I+ +
Sbjct: 106 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELD 162
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 222
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 223 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 257
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 111 ELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEEN-QLATSMSGTKPYI 169
E+ L +L +IHRDIK N+LL E + DF ++ L+ + GT ++
Sbjct: 137 EILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 196
Query: 170 APEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
APE+ + Y + D WSLG+T E +A G P
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIE-MAEGAP 232
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 86/189 (45%), Gaps = 36/189 (19%)
Query: 34 SQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDI 93
SQ IE NV +E ++ L+HP ++ L E +L +V + GG L ++
Sbjct: 47 SQTIE-----NVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS--- 98
Query: 94 KFYSVGTR--NDTIHLYAFELGLALDYLKTKH---IIHRDIKPDNILL---DEEGH---- 141
G R D + +A ++ ++YL + IIHRD+K NIL+ E G
Sbjct: 99 -----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNK 153
Query: 142 -AHITDFNIATVLEENQLATSMS--GTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLF 198
ITDF +A E T MS G ++APE+ + +S D WS GV L+
Sbjct: 154 ILKITDFGLA---REWHRTTKMSAAGAYAWMAPEVIRASM-----FSKGSDVWSYGVLLW 205
Query: 199 EILARGRPF 207
E+L PF
Sbjct: 206 ELLTGEVPF 214
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H +++L F ++ L D+ L +L ++ Q I+ +
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 185 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H +++L F ++ L D+ L +L ++ Q I+ +
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 185 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H +++L F ++ L D+ L +L ++ Q I+ +
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 185 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H +++L F ++ L D+ L +L ++ Q I+ +
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELD 125
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 185
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 186 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 220
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 17/170 (10%)
Query: 47 REMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIH 106
+E++++ +H LV L D +DL +V + G L ++ GT + H
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS-----CLDGTPPLSWH 133
Query: 107 LY---AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE---ENQLAT 160
+ A +++L H IHRDIK NILLDE A I+DF +A E + + +
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 161 SMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIH 210
+ GT Y+APE E+ S D +S GV L EI+ D H
Sbjct: 194 RIVGTTAYMAPEAL---RGEITPKS---DIYSFGVVLLEIITGLPAVDEH 237
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H +++L F ++ L D+ L +L ++ Q I+ +
Sbjct: 67 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELD 123
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 124 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 183
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 184 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H +++L F ++ L D+ L +L ++ Q I+ +
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 185 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H +++L F ++ L D+ L +L ++ Q I+ +
Sbjct: 69 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELD 125
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 185
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 186 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 220
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 7/121 (5%)
Query: 103 DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATVLEENQLATS 161
+ I +Y ++L A+ ++ + I HRDIKP N+L++ + + + DF A L ++ + +
Sbjct: 141 NLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVA 200
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAI 221
++ Y APE+ L AT+ Y+ S+D WS+G E++ G+P TS+ + I
Sbjct: 201 XICSRFYRAPELMLGATE----YTPSIDLWSIGCVFGELIL-GKPL-FSGETSIDQLVRI 254
Query: 222 I 222
I
Sbjct: 255 I 255
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H +++L F ++ L D+ L +L ++ Q I+ +
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELD 118
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 178
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 179 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H +++L F ++ L D+ L +L ++ Q I+ +
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELD 117
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 118 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 177
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 178 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 212
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H ++ L F ++ L D+ + +L ++ Q I+ +
Sbjct: 73 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELD 129
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 130 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 189
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 190 YVVTRYYRAPEVIL-----GMGYKENVDLWSVGCIMGEMV 224
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H +++L F ++ L D+ L +L ++ Q I+ +
Sbjct: 62 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELD 118
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 178
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 179 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 213
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H +++L F ++ L D+ L +L ++ Q I+ +
Sbjct: 68 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 185 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H +++L F ++ L D+ L +L ++ Q I+ +
Sbjct: 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELD 117
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 118 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP 177
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 178 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 212
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H ++ L F ++ L D+ + +L ++ Q I+ +
Sbjct: 70 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELD 126
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + +
Sbjct: 127 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVP 186
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ Y APE+ L +GY +VD WS+G + E++ G
Sbjct: 187 FVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMIKGG 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H ++ L F ++ L D+ + +L ++ Q I+ +
Sbjct: 62 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELD 118
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 178
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 179 YVVTRYYRAPEVIL-----GMGYKENVDLWSVGCIMGEMV 213
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 11/189 (5%)
Query: 12 SKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEE 71
+V V+ K+ ++YA+K +D + + +HP V L +++
Sbjct: 71 GEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG 130
Query: 72 DLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKP 131
L++ ++L G L+ H + + + Y + LAL +L ++ ++H D+KP
Sbjct: 131 ILYLQTELC-GPSLQQHC----EAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKP 185
Query: 132 DNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
NI L G + DF + L G Y+APE+ + Y + D +
Sbjct: 186 ANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGS------YGTAADVF 239
Query: 192 SLGVTLFEI 200
SLG+T+ E+
Sbjct: 240 SLGLTILEV 248
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H +++L F ++ L D+ L +L ++ Q I+ +
Sbjct: 68 KRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + + T
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 185 YVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 219
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQM-YAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
GS F K V + +T ++ A+K ++++ + + + E I+ +++HP LV
Sbjct: 47 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV--EFMDEALIMASMDHPHLVR 104
Query: 63 LW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT 121
L C + +V+ L+ G L ++ + ++G++ + + ++ + YL+
Sbjct: 105 LLGVCLSP--TIQLVTQLMPHGCLLEYVHEHKD--NIGSQ--LLLNWCVQIAKGMMYLEE 158
Query: 122 KHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
+ ++HRD+ N+L+ H ITDF +A +LE ++ + G K I + +
Sbjct: 159 RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI--KWMALECIHY 216
Query: 182 LGYSYSVDWWSLGVTLFEILA-RGRPFDIHSNTSVKDV 218
+++ D WS GVT++E++ G+P+D + D+
Sbjct: 217 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL 254
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C E+D L + L E I++ L H +V F++ +L+ GGDL+ + +
Sbjct: 87 CSEQDEL-DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 145
Query: 96 YSVGTRN---DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH---AHITDFNI 149
S + D +H+ A ++ YL+ H IHRDI N LL G A I DF +
Sbjct: 146 PSQPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 150 ATVLEE----NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG- 204
A + + +M K ++ PE F+ ++ D WS GV L+EI + G
Sbjct: 205 ARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI-----FTSKTDTWSFGVLLWEIFSLGY 258
Query: 205 RPFDIHSNTSV 215
P+ SN V
Sbjct: 259 MPYPSKSNQEV 269
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQM-YAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
GS F K V + +T ++ A+K ++++ + + + E I+ +++HP LV
Sbjct: 24 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV--EFMDEALIMASMDHPHLVR 81
Query: 63 LW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT 121
L C + +V+ L+ G L ++ + ++G++ + + ++ + YL+
Sbjct: 82 LLGVCLS--PTIQLVTQLMPHGCLLEYVHEHKD--NIGSQ--LLLNWCVQIAKGMMYLEE 135
Query: 122 KHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
+ ++HRD+ N+L+ H ITDF +A +LE ++ + G K I + +
Sbjct: 136 RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPI--KWMALECIHY 193
Query: 182 LGYSYSVDWWSLGVTLFEILA-RGRPFDIHSNTSVKDV 218
+++ D WS GVT++E++ G+P+D + D+
Sbjct: 194 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL 231
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 21/190 (11%)
Query: 40 DALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGD----LRYHITQDIKF 95
+A K+ RE E+LT L+H +V + + + L MV + + GD LR H D
Sbjct: 57 NARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAH-GPDAVL 115
Query: 96 YSVG------TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNI 149
+ G T++ +H+ A ++ + YL ++H +HRD+ N L+ E I DF +
Sbjct: 116 MAEGNPPTELTQSQMLHI-AQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGM 174
Query: 150 AT-VLEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR- 205
+ V + P ++ PE + ++ D WSLGV L+EI G+
Sbjct: 175 SRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK-----FTTESDVWSLGVVLWEIFTYGKQ 229
Query: 206 PFDIHSNTSV 215
P+ SN V
Sbjct: 230 PWYQLSNNEV 239
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 12/166 (7%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++++ + G+L ++ + +
Sbjct: 55 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR----QEV 110
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
N + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ +
Sbjct: 111 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
Query: 161 SMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
P + APE +S D W+ GV L+EI G
Sbjct: 171 PAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 211
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVGTRND 103
L E ++ L+H LV L + +E ++++++ + G L IK T N
Sbjct: 52 LAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL----TINK 106
Query: 104 TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
+ + A ++ + +++ ++ IHR+++ NIL+ + I DF +A ++E+N+ T+
Sbjct: 107 LLDMAA-QIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEY-TARE 164
Query: 164 GTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
G K + APE T ++ D WS G+ L EI+ GR P+ +N V
Sbjct: 165 GAKFPIKWTAPEAINYGT-----FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 215
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++++ + G+L ++ + +
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR----QEV 113
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
N + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ T
Sbjct: 114 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXT 172
Query: 161 SMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ +G K + APE +S D W+ GV L+EI G
Sbjct: 173 AHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 214
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 12/166 (7%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++++ + G+L ++ + +
Sbjct: 54 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR----QEV 109
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
N + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ +
Sbjct: 110 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 169
Query: 161 SMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
P + APE +S D W+ GV L+EI G
Sbjct: 170 PAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 210
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C E+D L + L E I++ L H +V F++ +L+ GGDL+ + +
Sbjct: 73 CSEQDEL-DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 96 YSVGTRN---DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH---AHITDFNI 149
S + D +H+ A ++ YL+ H IHRDI N LL G A I DF +
Sbjct: 132 PSQPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 150 ATVLEE----NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG- 204
A + + +M K ++ PE F+ ++ D WS GV L+EI + G
Sbjct: 191 ARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI-----FTSKTDTWSFGVLLWEIFSLGY 244
Query: 205 RPFDIHSNTSV 215
P+ SN V
Sbjct: 245 MPYPSKSNQEV 255
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 25/171 (14%)
Query: 42 LKNVLREMEILTTLEHPFLVNL-WFCFQDEED-LFMVSDLLLGGDLRYHITQDIKFYSVG 99
+ ++ +E+EIL L H +V C +D + + ++ + L G L+ ++ ++
Sbjct: 67 IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN------- 119
Query: 100 TRNDTIHL-----YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
+ I+L YA ++ +DYL ++ +HRD+ N+L++ E I DF + +E
Sbjct: 120 --KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177
Query: 155 ENQLATSMSGTKP----YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
++ ++ + + APE + + + + D WS GVTL E+L
Sbjct: 178 TDKEXXTVKDDRDSPVFWYAPECLMQSK-----FYIASDVWSFGVTLHELL 223
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++++ + G+L ++ + +
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR----QEV 108
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
N + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ + T
Sbjct: 109 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 167
Query: 161 SMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ +G K + APE +S D W+ GV L+EI G
Sbjct: 168 AHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 209
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 47 REMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIH 106
+E++++ +H LV L D +DL +V + G L ++ GT + H
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS-----CLDGTPPLSWH 133
Query: 107 LY---AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE---ENQLAT 160
+ A +++L H IHRDIK NILLDE A I+DF +A E + +
Sbjct: 134 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 161 SMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIH 210
+ GT Y+APE E+ S D +S GV L EI+ D H
Sbjct: 194 RIVGTTAYMAPEAL---RGEITPKS---DIYSFGVVLLEIITGLPAVDEH 237
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 96/203 (47%), Gaps = 27/203 (13%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP +++L + ++++ + G L + Q+ ++V
Sbjct: 79 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV---- 134
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEEN---- 156
I L G+A + YL + +HRD+ NIL++ ++DF ++ LE++
Sbjct: 135 --IQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 192
Query: 157 QLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNT 213
+++ G P + APE + ++ + D WS G+ ++E+++ G RP+ +N
Sbjct: 193 TYTSALGGKIPIRWTAPEAI-----QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 247
Query: 214 SVKDVKAI-----IYSPVHYPTA 231
V + AI + P+ P+A
Sbjct: 248 DV--INAIEQDYRLPPPMDCPSA 268
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 41 ALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG 99
ALK+ +L E ++ L++P++V + + E +V ++ G L ++ Q+
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRH----- 107
Query: 100 TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL--EENQ 157
++ I ++ + + YL+ + +HRD+ N+LL + +A I+DF ++ L +EN
Sbjct: 108 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENX 167
Query: 158 LATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTS 214
G P + APE +S D WS GV ++E + G +P+ +
Sbjct: 168 YKAQTHGKWPVKWYAPECI-----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
Query: 215 V 215
V
Sbjct: 223 V 223
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++++ + G+L ++ + +
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR----QEV 108
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
N + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ + T
Sbjct: 109 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 167
Query: 161 SMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ +G K + APE +S D W+ GV L+EI G
Sbjct: 168 AHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 209
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 15/191 (7%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDL 73
VC K + + A+K + + E A K RE+ +L ++H ++ L F L
Sbjct: 40 VCSAIDKRSGEKVAIKKLSRPFQSEIFA-KRAYRELLLLKHMQHENVIGLLDVFTPASSL 98
Query: 74 FMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDN 133
D L + + T K + + I +++ L Y+ + ++HRD+KP N
Sbjct: 99 RNFYDFYLV--MPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN 156
Query: 134 ILLDEEGHAHITDFNIATVLEENQLATSMSG---TKPYIAPEIFLVATDEVLGYSYSVDW 190
+ ++E+ I DF +A M+G T+ Y APE+ L + Y+ +VD
Sbjct: 157 LAVNEDCELKILDFGLA-----RHADAEMTGYVVTRWYRAPEVIL----SWMHYNQTVDI 207
Query: 191 WSLGVTLFEIL 201
WS+G + E+L
Sbjct: 208 WSVGCIMAEML 218
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 83/172 (48%), Gaps = 25/172 (14%)
Query: 42 LKNVLREMEILTTLEHPFLVNL-WFCFQDEED-LFMVSDLLLGGDLRYHITQDIKFYSVG 99
+ ++ +E+EIL L H +V C +D + + ++ + L G L+ ++ ++
Sbjct: 55 IADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN------- 107
Query: 100 TRNDTIHL-----YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
+ I+L YA ++ +DYL ++ +HRD+ N+L++ E I DF + +E
Sbjct: 108 --KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 165
Query: 155 ENQLATSMSGTKP----YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILA 202
++ ++ + + APE + + + + D WS GVTL E+L
Sbjct: 166 TDKEXXTVKDDRDSPVFWYAPECLMQSK-----FYIASDVWSFGVTLHELLT 212
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++++ + G+L ++ + +
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR----QEV 113
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
N + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ + T
Sbjct: 114 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 172
Query: 161 SMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ +G K + APE +S D W+ GV L+EI G
Sbjct: 173 AHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 214
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++++ + G+L ++ + +
Sbjct: 57 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR----QEV 112
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
N + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ + T
Sbjct: 113 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 171
Query: 161 SMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ +G K + APE +S D W+ GV L+EI G
Sbjct: 172 AHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 213
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++++ + G+L ++ + +
Sbjct: 66 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR----QEV 121
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
N + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ + T
Sbjct: 122 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 180
Query: 161 SMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ +G K + APE +S D W+ GV L+EI G
Sbjct: 181 AHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 222
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 47 REMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIH 106
+E++++ +H LV L D +DL +V + G L ++ GT + H
Sbjct: 73 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS-----CLDGTPPLSWH 127
Query: 107 LY---AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE---ENQLAT 160
+ A +++L H IHRDIK NILLDE A I+DF +A E + +
Sbjct: 128 MRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 161 SMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIH 210
+ GT Y+APE E+ S D +S GV L EI+ D H
Sbjct: 188 RIVGTTAYMAPEAL---RGEITPKS---DIYSFGVVLLEIITGLPAVDEH 231
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++++ + G+L ++ + +
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR----QEV 113
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
N + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ + T
Sbjct: 114 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 172
Query: 161 SMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ +G K + APE +S D W+ GV L+EI G
Sbjct: 173 AHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 214
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++++ + G+L ++ + +
Sbjct: 55 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR----QEV 110
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
N + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ + T
Sbjct: 111 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 169
Query: 161 SMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ +G K + APE +S D W+ GV L+EI G
Sbjct: 170 AHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 211
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 11/177 (6%)
Query: 34 SQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDL-FMVSDLLLGGDLRYHITQD 92
S+ E ++ LRE ++ L HP ++ L E L ++ + GDL
Sbjct: 58 SRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDL------- 110
Query: 93 IKFYSVGTRNDTIH-LYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNI 149
++F RN T+ L +F L +A ++YL + +HRD+ N +LDE + DF +
Sbjct: 111 LQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGL 170
Query: 150 ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRP 206
A + + + + + + + + + ++ D WS GV L+E+L RG P
Sbjct: 171 ARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++++ + G+L ++ + +
Sbjct: 55 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR----QEV 110
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
N + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ + T
Sbjct: 111 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 169
Query: 161 SMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ +G K + APE +S D W+ GV L+EI G
Sbjct: 170 AHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 211
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 15/191 (7%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDL 73
VC K + + A+K + + E A K RE+ +L ++H ++ L F L
Sbjct: 58 VCSAIDKRSGEKVAIKKLSRPFQSEIFA-KRAYRELLLLKHMQHENVIGLLDVFTPASSL 116
Query: 74 FMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDN 133
D L + + T K + + I +++ L Y+ + ++HRD+KP N
Sbjct: 117 RNFYDFYLV--MPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN 174
Query: 134 ILLDEEGHAHITDFNIATVLEENQLATSMSG---TKPYIAPEIFLVATDEVLGYSYSVDW 190
+ ++E+ I DF +A M+G T+ Y APE+ L + Y+ +VD
Sbjct: 175 LAVNEDCELKILDFGLA-----RHADAEMTGYVVTRWYRAPEVIL----SWMHYNQTVDI 225
Query: 191 WSLGVTLFEIL 201
WS+G + E+L
Sbjct: 226 WSVGCIMAEML 236
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 20/186 (10%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP +V+L + + +V + + G L + + ++V
Sbjct: 89 RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV---- 144
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA- 159
I L G+A + YL +HRD+ NIL++ ++DF ++ V+E++ A
Sbjct: 145 --IQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV 202
Query: 160 -TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSV 215
T+ G P + APE + ++ + D WS G+ ++E+++ G RP+ SN V
Sbjct: 203 YTTTGGKIPVRWTAPEAI-----QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV 257
Query: 216 KDVKAI 221
+KAI
Sbjct: 258 --IKAI 261
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 41 ALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG 99
ALK+ +L E ++ L++P++V + + E +V ++ G L ++ Q+
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRH----- 107
Query: 100 TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL--EENQ 157
++ I ++ + + YL+ + +HRD+ N+LL + +A I+DF ++ L +EN
Sbjct: 108 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 167
Query: 158 LATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTS 214
G P + APE +S D WS GV ++E + G +P+ +
Sbjct: 168 YKAQTHGKWPVKWYAPECI-----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
Query: 215 V 215
V
Sbjct: 223 V 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 41 ALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG 99
ALK+ +L E ++ L++P++V + + E +V ++ G L ++ Q+
Sbjct: 50 ALKDELLAEANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRH----- 103
Query: 100 TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL--EENQ 157
++ I ++ + + YL+ + +HRD+ N+LL + +A I+DF ++ L +EN
Sbjct: 104 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 163
Query: 158 LATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTS 214
G P + APE +S D WS GV ++E + G +P+ +
Sbjct: 164 YKAQTHGKWPVKWYAPECI-----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 218
Query: 215 V 215
V
Sbjct: 219 V 219
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C E+D L + L E I++ H +V F++ +L+ GGDL+ + +
Sbjct: 72 CSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPR 130
Query: 96 YSVGTRN---DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH---AHITDFNI 149
S + D +H+ A ++ YL+ H IHRDI N LL G A I DF +
Sbjct: 131 PSQPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 150 ATVLEE----NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG- 204
A + + +M K ++ PE F+ ++ D WS GV L+EI + G
Sbjct: 190 ARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI-----FTSKTDTWSFGVLLWEIFSLGY 243
Query: 205 RPFDIHSNTSV 215
P+ SN V
Sbjct: 244 MPYPSKSNQEV 254
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C E+D L + L E I++ H +V F++ +L+ GGDL+ + +
Sbjct: 87 CSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPR 145
Query: 96 YSVGTRN---DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH---AHITDFNI 149
S + D +H+ A ++ YL+ H IHRDI N LL G A I DF +
Sbjct: 146 PSQPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 204
Query: 150 ATVLEE----NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG- 204
A + + +M K ++ PE F+ ++ D WS GV L+EI + G
Sbjct: 205 ARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI-----FTSKTDTWSFGVLLWEIFSLGY 258
Query: 205 RPFDIHSNTSV 215
P+ SN V
Sbjct: 259 MPYPSKSNQEV 269
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR--YHITQDIKFYSVGTRND 103
L E ++ L+H LV L + +E ++++++ + G L IK T N
Sbjct: 56 LAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKL----TINK 110
Query: 104 TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS 163
+ + A ++ + +++ ++ IHRD++ NIL+ + I DF +A ++E+ + T+
Sbjct: 111 LLDMAA-QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAE-XTARE 168
Query: 164 GTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
G K + APE T ++ D WS G+ L EI+ GR P+ +N V
Sbjct: 169 GAKFPIKWTAPEAINYGT-----FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 41 ALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG 99
ALK+ +L E ++ L++P++V + + E +V ++ G L ++ Q+
Sbjct: 48 ALKDELLAEANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRH----- 101
Query: 100 TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL--EENQ 157
++ I ++ + + YL+ + +HRD+ N+LL + +A I+DF ++ L +EN
Sbjct: 102 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 161
Query: 158 LATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTS 214
G P + APE +S D WS GV ++E + G +P+ +
Sbjct: 162 YKAQTHGKWPVKWYAPECI-----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 216
Query: 215 V 215
V
Sbjct: 217 V 217
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 41 ALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG 99
ALK+ +L E ++ L++P++V + + E +V ++ G L ++ Q+
Sbjct: 60 ALKDELLAEANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRH----- 113
Query: 100 TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL--EENQ 157
++ I ++ + + YL+ + +HRD+ N+LL + +A I+DF ++ L +EN
Sbjct: 114 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173
Query: 158 LATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTS 214
G P + APE +S D WS GV ++E + G +P+ +
Sbjct: 174 YKAQTHGKWPVKWYAPECI-----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 228
Query: 215 V 215
V
Sbjct: 229 V 229
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 41 ALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG 99
ALK+ +L E ++ L++P++V + + E +V ++ G L ++ Q+
Sbjct: 68 ALKDELLAEANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRH----- 121
Query: 100 TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL--EENQ 157
++ I ++ + + YL+ + +HRD+ N+LL + +A I+DF ++ L +EN
Sbjct: 122 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 181
Query: 158 LATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTS 214
G P + APE +S D WS GV ++E + G +P+ +
Sbjct: 182 YKAQTHGKWPVKWYAPECI-----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 236
Query: 215 V 215
V
Sbjct: 237 V 237
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C E+D L + L E I++ H +V F++ +L+ GGDL+ + +
Sbjct: 64 CSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 122
Query: 96 YSVGTRN---DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH---AHITDFNI 149
S + D +H+ A ++ YL+ H IHRDI N LL G A I DF +
Sbjct: 123 PSQPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 181
Query: 150 ATVLEE----NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG- 204
A + + +M K ++ PE F+ ++ D WS GV L+EI + G
Sbjct: 182 ARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI-----FTSKTDTWSFGVLLWEIFSLGY 235
Query: 205 RPFDIHSNTSV 215
P+ SN V
Sbjct: 236 MPYPSKSNQEV 246
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C E+D L + L E I++ H +V F++ +L+ GGDL+ + +
Sbjct: 89 CSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 147
Query: 96 YSVGTRN---DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH---AHITDFNI 149
S + D +H+ A ++ YL+ H IHRDI N LL G A I DF +
Sbjct: 148 PSQPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 206
Query: 150 ATVLEE----NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG- 204
A + + +M K ++ PE F+ ++ D WS GV L+EI + G
Sbjct: 207 ARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI-----FTSKTDTWSFGVLLWEIFSLGY 260
Query: 205 RPFDIHSNTSV 215
P+ SN V
Sbjct: 261 MPYPSKSNQEV 271
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C E+D L + L E I++ H +V F++ +L+ GGDL+ + +
Sbjct: 99 CSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 157
Query: 96 YSVGTRN---DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH---AHITDFNI 149
S + D +H+ A ++ YL+ H IHRDI N LL G A I DF +
Sbjct: 158 PSQPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 216
Query: 150 ATVLEE----NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG- 204
A + + +M K ++ PE F+ ++ D WS GV L+EI + G
Sbjct: 217 ARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI-----FTSKTDTWSFGVLLWEIFSLGY 270
Query: 205 RPFDIHSNTSV 215
P+ SN V
Sbjct: 271 MPYPSKSNQEV 281
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 41 ALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG 99
ALK+ +L E ++ L++P++V + + E +V ++ G L ++ Q+
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRH----- 123
Query: 100 TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL--EENQ 157
++ I ++ + + YL+ + +HRD+ N+LL + +A I+DF ++ L +EN
Sbjct: 124 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 158 LATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTS 214
G P + APE +S D WS GV ++E + G +P+ +
Sbjct: 184 YKAQTHGKWPVKWYAPECI-----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
Query: 215 V 215
V
Sbjct: 239 V 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 41 ALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG 99
ALK+ +L E ++ L++P++V + + E +V ++ G L ++ Q+
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRH----- 123
Query: 100 TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL--EENQ 157
++ I ++ + + YL+ + +HRD+ N+LL + +A I+DF ++ L +EN
Sbjct: 124 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 158 LATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTS 214
G P + APE +S D WS GV ++E + G +P+ +
Sbjct: 184 YKAQTHGKWPVKWYAPECI-----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
Query: 215 V 215
V
Sbjct: 239 V 239
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C E+D L + L E I++ H +V F++ +L+ GGDL+ + +
Sbjct: 90 CSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 148
Query: 96 YSVGTRN---DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH---AHITDFNI 149
S + D +H+ A ++ YL+ H IHRDI N LL G A I DF +
Sbjct: 149 PSQPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 207
Query: 150 ATVLEE----NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG- 204
A + + +M K ++ PE F+ ++ D WS GV L+EI + G
Sbjct: 208 ARDIYRAGYYRKGGCAMLPVK-WMPPEAFMEGI-----FTSKTDTWSFGVLLWEIFSLGY 261
Query: 205 RPFDIHSNTSV 215
P+ SN V
Sbjct: 262 MPYPSKSNQEV 272
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C E+D L + L E I++ H +V F++ +L+ GGDL+ + +
Sbjct: 79 CSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 137
Query: 96 YSVGTRN---DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH---AHITDFNI 149
S + D +H+ A ++ YL+ H IHRDI N LL G A I DF +
Sbjct: 138 PSQPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 196
Query: 150 ATVLEE----NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG- 204
A + + +M K ++ PE F+ ++ D WS GV L+EI + G
Sbjct: 197 ARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI-----FTSKTDTWSFGVLLWEIFSLGY 250
Query: 205 RPFDIHSNTSV 215
P+ SN V
Sbjct: 251 MPYPSKSNQEV 261
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C E+D L + L E I++ H +V F++ +L+ GGDL+ + +
Sbjct: 72 CSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 130
Query: 96 YSVGTRN---DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH---AHITDFNI 149
S + D +H+ A ++ YL+ H IHRDI N LL G A I DF +
Sbjct: 131 PSQPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 189
Query: 150 ATVLEE----NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG- 204
A + + +M K ++ PE F+ ++ D WS GV L+EI + G
Sbjct: 190 ARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI-----FTSKTDTWSFGVLLWEIFSLGY 243
Query: 205 RPFDIHSNTSV 215
P+ SN V
Sbjct: 244 MPYPSKSNQEV 254
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C E+D L + L E I++ H +V F++ +L+ GGDL+ + +
Sbjct: 113 CSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 171
Query: 96 YSVGTRN---DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH---AHITDFNI 149
S + D +H+ A ++ YL+ H IHRDI N LL G A I DF +
Sbjct: 172 PSQPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 230
Query: 150 ATVLEE----NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG- 204
A + + +M K ++ PE F+ ++ D WS GV L+EI + G
Sbjct: 231 ARDIYRAGYYRKGGCAMLPVK-WMPPEAFMEGI-----FTSKTDTWSFGVLLWEIFSLGY 284
Query: 205 RPFDIHSNTSV 215
P+ SN V
Sbjct: 285 MPYPSKSNQEV 295
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEI-LTTLEHPFLVNLWFCFQD 69
KV + K T++ +A+K + +D K RE+E+ + P +V + +++
Sbjct: 37 NGKVLQIFNKRTQEKFALKML-------QDCPK-ARREVELHWRASQCPHIVRIVDVYEN 88
Query: 70 ----EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHII 125
+ L +V + L GG+L I QD + R + + + +G A+ YL + +I
Sbjct: 89 LYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKS--IGEAIQYLHSINIA 145
Query: 126 HRDIKPDNILLDEEGHAHI---TDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
HRD+KP+N+L + I TDF A + T+ T Y+AP EVL
Sbjct: 146 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP--------EVL 197
Query: 183 G---YSYSVDWWSLGVTLFEILARGRPF 207
G Y S D WSLGV ++ +L PF
Sbjct: 198 GPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C E+D L + L E I++ H +V F++ +L+ GGDL+ + +
Sbjct: 73 CSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 96 YSVGTRN---DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH---AHITDFNI 149
S + D +H+ A ++ YL+ H IHRDI N LL G A I DF +
Sbjct: 132 PSQPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 150 ATVLEE----NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG- 204
A + + +M K ++ PE F+ ++ D WS GV L+EI + G
Sbjct: 191 AQDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI-----FTSKTDTWSFGVLLWEIFSLGY 244
Query: 205 RPFDIHSNTSV 215
P+ SN V
Sbjct: 245 MPYPSKSNQEV 255
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 23/121 (19%)
Query: 97 SVGTRNDTIHLYAF-ELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL-- 153
S+ R + L+ F ++ A+++L +K ++HRD+KP NI + + DF + T +
Sbjct: 157 SLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ 216
Query: 154 --EENQLATSMS---------GTKPYIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEI 200
EE + T M GTK Y++PE ++ G YS+ VD +SLG+ LFE+
Sbjct: 217 DEEEQTVLTPMPAYATHXGQVGTKLYMSPE-------QIHGNNYSHKVDIFSLGLILFEL 269
Query: 201 L 201
L
Sbjct: 270 L 270
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEI-LTTLEHPFLVNLWFCFQD 69
KV + K T++ +A+K + +D K RE+E+ + P +V + +++
Sbjct: 36 NGKVLQIFNKRTQEKFALKML-------QDCPK-ARREVELHWRASQCPHIVRIVDVYEN 87
Query: 70 ----EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHII 125
+ L +V + L GG+L I QD + R + + + +G A+ YL + +I
Sbjct: 88 LYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKS--IGEAIQYLHSINIA 144
Query: 126 HRDIKPDNILLDEEGHAHI---TDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
HRD+KP+N+L + I TDF A + T+ T Y+AP EVL
Sbjct: 145 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP--------EVL 196
Query: 183 G---YSYSVDWWSLGVTLFEILARGRPF 207
G Y S D WSLGV ++ +L PF
Sbjct: 197 GPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEI-LTTLEHPFLVNLWFCFQD 69
KV + K T++ +A+K + +D K RE+E+ + P +V + +++
Sbjct: 35 NGKVLQIFNKRTQEKFALKML-------QDCPK-ARREVELHWRASQCPHIVRIVDVYEN 86
Query: 70 ----EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHII 125
+ L +V + L GG+L I QD + R + + + +G A+ YL + +I
Sbjct: 87 LYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKS--IGEAIQYLHSINIA 143
Query: 126 HRDIKPDNILLDEEGHAHI---TDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
HRD+KP+N+L + I TDF A + T+ T Y+AP EVL
Sbjct: 144 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP--------EVL 195
Query: 183 G---YSYSVDWWSLGVTLFEILARGRPF 207
G Y S D WSLGV ++ +L PF
Sbjct: 196 GPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 84/191 (43%), Gaps = 19/191 (9%)
Query: 36 CIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKF 95
C E+D L + L E I++ H +V F++ +L+ GGDL+ + +
Sbjct: 73 CSEQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 96 YSVGTRN---DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH---AHITDFNI 149
S + D +H+ A ++ YL+ H IHRDI N LL G A I DF +
Sbjct: 132 PSQPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM 190
Query: 150 ATVLEE----NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG- 204
A + + +M K ++ PE F+ ++ D WS GV L+EI + G
Sbjct: 191 ARDIYRASYYRKGGCAMLPVK-WMPPEAFMEGI-----FTSKTDTWSFGVLLWEIFSLGY 244
Query: 205 RPFDIHSNTSV 215
P+ SN V
Sbjct: 245 MPYPSKSNQEV 255
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEI-LTTLEHPFLVNLWFCFQD 69
KV + K T++ +A+K + +D K RE+E+ + P +V + +++
Sbjct: 31 NGKVLQIFNKRTQEKFALKML-------QDCPK-ARREVELHWRASQCPHIVRIVDVYEN 82
Query: 70 ----EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHII 125
+ L +V + L GG+L I QD + R + + + +G A+ YL + +I
Sbjct: 83 LYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKS--IGEAIQYLHSINIA 139
Query: 126 HRDIKPDNILLDEEGHAHI---TDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
HRD+KP+N+L + I TDF A + T+ T Y+AP EVL
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP--------EVL 191
Query: 183 G---YSYSVDWWSLGVTLFEILARGRPF 207
G Y S D WSLGV ++ +L PF
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEI-LTTLEHPFLVNLWFCFQD 69
KV + K T++ +A+K + +D K RE+E+ + P +V + +++
Sbjct: 29 NGKVLQIFNKRTQEKFALKML-------QDCPK-ARREVELHWRASQCPHIVRIVDVYEN 80
Query: 70 ----EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHII 125
+ L +V + L GG+L I QD + R + + + +G A+ YL + +I
Sbjct: 81 LYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKS--IGEAIQYLHSINIA 137
Query: 126 HRDIKPDNILLDEEGHAHI---TDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
HRD+KP+N+L + I TDF A + T+ T Y+AP EVL
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP--------EVL 189
Query: 183 G---YSYSVDWWSLGVTLFEILARGRPF 207
G Y S D WSLGV ++ +L PF
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEI-LTTLEHPFLVNLWFCFQD 69
KV + K T++ +A+K + +D K RE+E+ + P +V + +++
Sbjct: 30 NGKVLQIFNKRTQEKFALKML-------QDCPK-ARREVELHWRASQCPHIVRIVDVYEN 81
Query: 70 ----EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHII 125
+ L +V + L GG+L I QD + R + + + +G A+ YL + +I
Sbjct: 82 LYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKS--IGEAIQYLHSINIA 138
Query: 126 HRDIKPDNILLDEEGHAHI---TDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
HRD+KP+N+L + I TDF A + T+ T Y+AP EVL
Sbjct: 139 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP--------EVL 190
Query: 183 G---YSYSVDWWSLGVTLFEILARGRPF 207
G Y S D WSLGV ++ +L PF
Sbjct: 191 GPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEI-LTTLEHPFLVNLWFCFQD 69
KV + K T++ +A+K + +D K RE+E+ + P +V + +++
Sbjct: 45 NGKVLQIFNKRTQEKFALKML-------QDCPK-ARREVELHWRASQCPHIVRIVDVYEN 96
Query: 70 ----EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHII 125
+ L +V + L GG+L I QD + R + + + +G A+ YL + +I
Sbjct: 97 LYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKS--IGEAIQYLHSINIA 153
Query: 126 HRDIKPDNILLDEEGHAHI---TDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
HRD+KP+N+L + I TDF A + T+ T Y+AP EVL
Sbjct: 154 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP--------EVL 205
Query: 183 G---YSYSVDWWSLGVTLFEILARGRPF 207
G Y S D WSLGV ++ +L PF
Sbjct: 206 GPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 17/141 (12%)
Query: 73 LFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPD 132
L +V + L GG+L I QD + R + + + +G A+ YL + +I HRD+KP+
Sbjct: 134 LLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKS--IGEAIQYLHSINIAHRDVKPE 190
Query: 133 NILLDEEGHAHI---TDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLG---YSY 186
N+L + I TDF A + T+ T Y+AP EVLG Y
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP--------EVLGPEKYDK 242
Query: 187 SVDWWSLGVTLFEILARGRPF 207
S D WSLGV ++ +L PF
Sbjct: 243 SCDMWSLGVIMYILLCGYPPF 263
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEI-LTTLEHPFLVNLWFCFQD 69
KV + K T++ +A+K + +D K RE+E+ + P +V + +++
Sbjct: 31 NGKVLQIFNKRTQEKFALKML-------QDCPK-ARREVELHWRASQCPHIVRIVDVYEN 82
Query: 70 ----EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHII 125
+ L +V + L GG+L I QD + R + + + +G A+ YL + +I
Sbjct: 83 LYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKS--IGEAIQYLHSINIA 139
Query: 126 HRDIKPDNILLDEEGHAHI---TDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
HRD+KP+N+L + I TDF A + T+ T Y+AP EVL
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP--------EVL 191
Query: 183 G---YSYSVDWWSLGVTLFEILARGRPF 207
G Y S D WSLGV ++ +L PF
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++ + + G+L ++ + +
Sbjct: 54 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE----CNRQEV 109
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
N + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ T
Sbjct: 110 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXT 168
Query: 161 SMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ +G K + APE +S D W+ GV L+EI G
Sbjct: 169 AHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 210
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLE--ENQLATSMSGTKPYIAPEIFLVATDEV 181
IIHRD+K NILLDEE A + DF +A +++ + + ++ GT +IAPE
Sbjct: 163 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKS-- 220
Query: 182 LGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDV 218
S D + GV L E++ R FD+ + DV
Sbjct: 221 ---SEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 254
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEI-LTTLEHPFLVNLWFCFQD 69
KV + K T++ +A+K + +D K RE+E+ + P +V + +++
Sbjct: 29 NGKVLQIFNKRTQEKFALKML-------QDCPK-ARREVELHWRASQCPHIVRIVDVYEN 80
Query: 70 ----EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHII 125
+ L +V + L GG+L I QD + R + + + +G A+ YL + +I
Sbjct: 81 LYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKS--IGEAIQYLHSINIA 137
Query: 126 HRDIKPDNILLDEEGHAHI---TDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
HRD+KP+N+L + I TDF A + T T Y+AP EVL
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAP--------EVL 189
Query: 183 G---YSYSVDWWSLGVTLFEILARGRPF 207
G Y S D WSLGV ++ +L PF
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 41 ALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG 99
ALK+ +L E ++ L++P++V + + E +V ++ G L ++ Q+
Sbjct: 412 ALKDELLAEANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRH----- 465
Query: 100 TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL--EENQ 157
++ I ++ + + YL+ + +HRD+ N+LL + +A I+DF ++ L +EN
Sbjct: 466 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525
Query: 158 LATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTS 214
G P + APE +S D WS GV ++E + G +P+ +
Sbjct: 526 YKAQTHGKWPVKWYAPECI-----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 580
Query: 215 V 215
V
Sbjct: 581 V 581
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEI-LTTLEHPFLVNLWFCFQD 69
KV + K T++ +A+K + +D K RE+E+ + P +V + +++
Sbjct: 81 NGKVLQIFNKRTQEKFALKML-------QDCPK-ARREVELHWRASQCPHIVRIVDVYEN 132
Query: 70 ----EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHII 125
+ L +V + L GG+L I QD + R + + + +G A+ YL + +I
Sbjct: 133 LYAGRKCLLIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKS--IGEAIQYLHSINIA 189
Query: 126 HRDIKPDNILLDEEGHAHI---TDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
HRD+KP+N+L + I TDF A + T+ T Y+AP EVL
Sbjct: 190 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP--------EVL 241
Query: 183 G---YSYSVDWWSLGVTLFEILARGRPF 207
G Y S D WSLGV ++ +L PF
Sbjct: 242 GPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 41 ALKN-VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG 99
ALK+ +L E ++ L++P++V + + E +V ++ G L ++ Q+
Sbjct: 413 ALKDELLAEANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRH----- 466
Query: 100 TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL--EENQ 157
++ I ++ + + YL+ + +HRD+ N+LL + +A I+DF ++ L +EN
Sbjct: 467 VKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 526
Query: 158 LATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTS 214
G P + APE +S D WS GV ++E + G +P+ +
Sbjct: 527 YKAQTHGKWPVKWYAPECI-----NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 581
Query: 215 V 215
V
Sbjct: 582 V 582
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDL----RYHITQDIKFYS 97
++ L+E ++ ++HP LV L E +++++ + G+L R Q++
Sbjct: 299 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---- 354
Query: 98 VGTRNDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
N + LY A ++ A++YL+ K+ IHR++ N L+ E + DF ++ ++ +
Sbjct: 355 ----NAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 410
Query: 157 QLATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ +G K + APE +S D W+ GV L+EI G
Sbjct: 411 TY-TAHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 455
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDL----RYHITQDIKFYS 97
++ L+E ++ ++HP LV L E +++++ + G+L R Q++
Sbjct: 51 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---- 106
Query: 98 VGTRNDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
+ + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ +
Sbjct: 107 ----SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
Query: 157 QLATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ +G K + APE +S D W+ GV L+EI G
Sbjct: 163 TF-TAHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 207
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H ++ L F ++ L D+ + +L ++ Q I+ +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 185 EVVTRYYRAPEVIL-----GMGYKENVDLWSVGCIMGEMV 219
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++ + + G+L ++ + +
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR----QEV 113
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
N + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ + T
Sbjct: 114 NAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 172
Query: 161 SMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ +G K + APE +S D W+ GV L+EI G
Sbjct: 173 AHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 214
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 28/174 (16%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDL--------RYHITQDI 93
++ L+E ++ ++HP LV L E ++V++ + G+L R +T +
Sbjct: 72 VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVV 131
Query: 94 KFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL 153
Y A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++
Sbjct: 132 LLY-----------MATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLM 180
Query: 154 EENQLATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ T+ +G K + APE T +S D W+ GV L+EI G
Sbjct: 181 TGDTY-TAHAGAKFPIKWTAPESLAYNT-----FSIKSDVWAFGVLLWEIATYG 228
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 106/220 (48%), Gaps = 17/220 (7%)
Query: 4 GSSKFCGTSK-VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
GS F K + I ++ K A+K + ++ + A K +L E ++ + P++
Sbjct: 26 GSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK--ANKEILDEAYVMAGVGSPYVSR 83
Query: 63 LW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT 121
L C L V+ L+ G L H+ ++ +G+++ + + ++ + YL+
Sbjct: 84 LLGICLTSTVQL--VTQLMPYGCLLDHVRENRG--RLGSQD--LLNWCMQIAKGMSYLED 137
Query: 122 KHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
++HRD+ N+L+ H ITDF +A +L+ ++ G K P I +A + +
Sbjct: 138 VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGK---VP-IKWMALESI 193
Query: 182 L--GYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSVKDV 218
L +++ D WS GVT++E++ G +P+D + D+
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDL 233
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDL----RYHITQDIKFYS 97
++ L+E ++ ++HP LV L E +++++ + G+L R Q++
Sbjct: 257 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---- 312
Query: 98 VGTRNDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
N + LY A ++ A++YL+ K+ IHR++ N L+ E + DF ++ ++ +
Sbjct: 313 ----NAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 368
Query: 157 QLATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ +G K + APE +S D W+ GV L+EI G
Sbjct: 369 TY-TAHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 413
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 44/190 (23%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDI------KFY 96
K +LRE+ IL L+ +++ L+ DL + DLL +L +I +I K +
Sbjct: 70 KRILREITILNRLKSDYIIRLY-------DLIIPDDLLKFDEL--YIVLEIADSDLKKLF 120
Query: 97 S--VGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDF------- 147
+ + I + L L +++ IIHRD+KP N LL+++ + DF
Sbjct: 121 KTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180
Query: 148 -----NIATVLEENQLA-----------TSMSGTKPYIAPEIFLVATDEVLGYSYSVDWW 191
NI LEEN+ TS T+ Y APE+ L+ + Y+ S+D W
Sbjct: 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQEN----YTKSIDIW 236
Query: 192 SLGVTLFEIL 201
S G E+L
Sbjct: 237 STGCIFAELL 246
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 22/171 (12%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDL----RYHITQDIKFYS 97
++ L+E ++ ++HP LV L E +++++ + G+L R Q++
Sbjct: 51 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---- 106
Query: 98 VGTRNDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
+ + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++
Sbjct: 107 ----SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TG 161
Query: 157 QLATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ +G K + APE +S D W+ GV L+EI G
Sbjct: 162 DTXTAHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 207
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 26/244 (10%)
Query: 10 GTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNL-WFCFQ 68
G S V +V+ YA+K + C E+ + RE ++ HP ++ L +C +
Sbjct: 41 GFSYVDLVEGLHDGHFYALK---RILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLR 97
Query: 69 D---EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHII 125
+ + + +++ G L ++ + +K D I + L+ + K
Sbjct: 98 ERGAKHEAWLLLPFFKRGTL-WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYA 156
Query: 126 HRDIKPDNILLDEEGHAHITDF---NIATV-LEENQLATSMSG------TKPYIAPEIFL 175
HRD+KP NILL +EG + D N A + +E ++ A ++ T Y APE+F
Sbjct: 157 HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFS 216
Query: 176 VATDEVLGYSYSVDWWSLGVTLFEILARGRPFDI------HSNTSVKDVKAIIYSPVHYP 229
V + V+ D WSLG L+ ++ P+D+ +V++ +I SP H
Sbjct: 217 VQSHCVI--DERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSS 274
Query: 230 TAWS 233
W
Sbjct: 275 ALWQ 278
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 103/210 (49%), Gaps = 17/210 (8%)
Query: 4 GSSKFCGTSK-VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
GS F K + I + + K A+K + ++ + A K +L E ++ ++++P +
Sbjct: 25 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVMASVDNPHVCR 82
Query: 63 LW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT 121
L C L M L+ G L ++ + ++G++ + + ++ ++YL+
Sbjct: 83 LLGICLTSTVQLIM--QLMPFGXLLDYVREHKD--NIGSQ--YLLNWCVQIAKGMNYLED 136
Query: 122 KHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
+ ++HRD+ N+L+ H ITDF +A +L + G K P I +A + +
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK---VP-IKWMALESI 192
Query: 182 LG--YSYSVDWWSLGVTLFEILARG-RPFD 208
L Y++ D WS GVT++E++ G +P+D
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 18/216 (8%)
Query: 8 FCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF 67
F G S+V + + + A+K + + RE + L HP +V ++
Sbjct: 22 FGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATG 81
Query: 68 QDEEDL----FMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ E ++V + + G LR + + T I + A + AL++
Sbjct: 82 EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM----TPKRAIEVIA-DACQALNFSHQNG 136
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS----GTKPYIAPEIFLVATD 179
IIHRD+KP NI++ + DF IA + ++ + + + GT Y++PE D
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--QARGD 194
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
V S D +SLG L+E+L PF S SV
Sbjct: 195 SVDARS---DVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 95 FYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
FY + + Y+F++ +++L ++ IHRD+ NILL E I DF +A +
Sbjct: 191 FYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 155 ENQLATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+N T+ ++APE D++ YS D WS GV L+EI + G
Sbjct: 251 KNPDYVRKGDTRLPLKWMAPESIF---DKI--YSTKSDVWSYGVLLWEIFSLG 298
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 19/102 (18%)
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIAT---------VLEENQLA------ 159
AL Y+ ++ IIHRD+KP NI +DE + I DF +A L+ L
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 160 TSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
TS GT Y+A E+ D Y+ +D +SLG+ FE++
Sbjct: 188 TSAIGTAMYVATEVL----DGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 19/102 (18%)
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIAT---------VLEENQLA------ 159
AL Y+ ++ IIHRD+KP NI +DE + I DF +A L+ L
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 160 TSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
TS GT Y+A E+ D Y+ +D +SLG+ FE++
Sbjct: 188 TSAIGTAMYVATEVL----DGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLR-YHITQDIKFYSVGTR 101
K RE+ ++ + H ++ L F ++ L D+ + +L ++ Q I+ +
Sbjct: 68 KRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ---MELD 124
Query: 102 NDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATS 161
++ + +++ + +L + IIHRD+KP NI++ + I DF +A + +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP 184
Query: 162 MSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
T+ Y APE+ L +GY +VD WS+G + E++
Sbjct: 185 EVVTRYYRAPEVIL-----GMGYKENVDIWSVGCIMGEMV 219
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIF 174
+DY+ +K +I+RD+KP NI L + I DF + T L+ + GT Y++PE
Sbjct: 134 GVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQ- 192
Query: 175 LVATDEVLGYSYSVDWWSLGVTLFEIL 201
+ + D Y VD ++LG+ L E+L
Sbjct: 193 ISSQD----YGKEVDLYALGLILAELL 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 18/216 (8%)
Query: 8 FCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF 67
F G S+V + + + A+K + + RE + L HP +V ++
Sbjct: 22 FGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTG 81
Query: 68 QDEEDL----FMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ E ++V + + G LR + + T I + A + AL++
Sbjct: 82 EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM----TPKRAIEVIA-DACQALNFSHQNG 136
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS----GTKPYIAPEIFLVATD 179
IIHRD+KP NIL+ + DF IA + ++ + + GT Y++PE D
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE--QARGD 194
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
V S D +SLG L+E+L PF S SV
Sbjct: 195 SVDARS---DVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDL----RYHITQDIKFYS 97
++ L+E ++ ++HP LV L E +++++ + G+L R Q++
Sbjct: 58 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---- 113
Query: 98 VGTRNDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
+ + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ +
Sbjct: 114 ----SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
Query: 157 QLATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ +G K + APE +S D W+ GV L+EI G
Sbjct: 170 TY-TAHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 214
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 13/177 (7%)
Query: 46 LREMEILTTLEHPFLVNLWFCF-----QDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
L+ M+ L L HP +V L F +D D+++ + D + ++ V
Sbjct: 67 LQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAP 126
Query: 101 RNDTIHLYAFEL--GLALDYLKTKHIIHRDIKPDNILLDE-EGHAHITDFNIATVLEENQ 157
I ++ F+L + +L + ++ HRDIKP N+L++E +G + DF A L ++
Sbjct: 127 PPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE 186
Query: 158 LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTS 214
+ ++ Y APE+ Y+ +VD WS+G E++ G P N++
Sbjct: 187 PNVAYICSRYYRAPELIFGNQH----YTTAVDIWSVGCIFAEMML-GEPIFRGDNSA 238
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDL----RYHITQDIKFYS 97
++ L+E ++ ++HP LV L E +++++ + G+L R Q++
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---- 108
Query: 98 VGTRNDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
+ + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ +
Sbjct: 109 ----SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 157 QLATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ +G K + APE +S D W+ GV L+EI G
Sbjct: 165 TY-TAHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 209
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 95/203 (46%), Gaps = 27/203 (13%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRN 102
++ L E I+ +HP +++L + ++++ + G L + Q+ ++V
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV---- 108
Query: 103 DTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEEN---- 156
I L G+A + YL + +HR + NIL++ ++DF ++ LE++
Sbjct: 109 --IQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 166
Query: 157 QLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNT 213
+++ G P + APE + ++ + D WS G+ ++E+++ G RP+ +N
Sbjct: 167 TYTSALGGKIPIRWTAPEAI-----QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 221
Query: 214 SVKDVKAI-----IYSPVHYPTA 231
V + AI + P+ P+A
Sbjct: 222 DV--INAIEQDYRLPPPMDCPSA 242
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++++ + G+L ++ + +
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR----QEV 108
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
+ + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ + T
Sbjct: 109 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 167
Query: 161 SMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ +G K + APE +S D W+ GV L+EI G
Sbjct: 168 AHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 209
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 18/216 (8%)
Query: 8 FCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF 67
F G S+V + + + A+K + + RE + L HP +V ++
Sbjct: 39 FGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTG 98
Query: 68 QDEEDL----FMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ E ++V + + G LR + + T I + A + AL++
Sbjct: 99 EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM----TPKRAIEVIA-DACQALNFSHQNG 153
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS----GTKPYIAPEIFLVATD 179
IIHRD+KP NI++ + DF IA + ++ + + + GT Y++PE D
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--QARGD 211
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
V S D +SLG L+E+L PF S SV
Sbjct: 212 SVDARS---DVYSLGCVLYEVLTGEPPFTGDSPVSV 244
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEED 72
V I + K + + M K E+D L +++ EME++ + +H ++NL +
Sbjct: 57 VGIDKDKPKEAVTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115
Query: 73 LFMVSDLLLGGDLRYHI----------TQDIKFYSVG--TRNDTIHLYAFELGLALDYLK 120
L+++ + G+LR ++ + DI T D + ++L ++YL
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC-TYQLARGMEYLA 174
Query: 121 TKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVA 177
++ IHRD+ N+L+ E I DF +A + + + +G P ++APE
Sbjct: 175 SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF-- 232
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARG 204
D V Y++ D WS GV ++EI G
Sbjct: 233 -DRV--YTHQSDVWSFGVLMWEIFTLG 256
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEED 72
V I + K + + M K E+D L +++ EME++ + +H ++NL +
Sbjct: 57 VGIDKDKPKEAVTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115
Query: 73 LFMVSDLLLGGDLRYHI----------TQDIKFYSVG--TRNDTIHLYAFELGLALDYLK 120
L+++ + G+LR ++ + DI T D + ++L ++YL
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC-TYQLARGMEYLA 174
Query: 121 TKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVA 177
++ IHRD+ N+L+ E I DF +A + + + +G P ++APE
Sbjct: 175 SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALF-- 232
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARG 204
D V Y++ D WS GV ++EI G
Sbjct: 233 -DRV--YTHQSDVWSFGVLMWEIFTLG 256
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 40 DALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG 99
D + + E I+ L+HP +V L +EE +++ +L G+L +++ ++ V
Sbjct: 51 DNKEKFMSEAVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL 109
Query: 100 TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA 159
T + LY+ ++ A+ YL++ + +HRDI NIL+ + DF ++ +E+
Sbjct: 110 T----LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 165
Query: 160 TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVK 216
+ P +++PE + ++ + D W V ++EIL+ G+ PF N V
Sbjct: 166 KASVTRLPIKWMSPE-----SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 220
Query: 217 DV 218
V
Sbjct: 221 GV 222
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 128 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 186
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 187 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 180
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 181 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 116 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 174
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 175 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 132 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 190
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 191 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 40 DALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG 99
D + + E I+ L+HP +V L +EE +++ +L G+L +++ ++ V
Sbjct: 55 DNKEKFMSEAVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL 113
Query: 100 TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA 159
T + LY+ ++ A+ YL++ + +HRDI NIL+ + DF ++ +E+
Sbjct: 114 T----LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 169
Query: 160 TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVK 216
+ P +++PE + ++ + D W V ++EIL+ G+ PF N V
Sbjct: 170 KASVTRLPIKWMSPE-----SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 224
Query: 217 DV 218
V
Sbjct: 225 GV 226
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 104/210 (49%), Gaps = 17/210 (8%)
Query: 4 GSSKFCGTSK-VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
GS F K + I + + K A+K + ++ + A K +L E ++ ++++P +
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVMASVDNPHVCR 81
Query: 63 LW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT 121
L C L ++ L+ G L ++ + ++G++ + + ++ ++YL+
Sbjct: 82 LLGICLTSTVQL--ITQLMPFGXLLDYVREHKD--NIGSQ--YLLNWCVQIAKGMNYLED 135
Query: 122 KHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
+ ++HRD+ N+L+ H ITDF +A +L + G K P I +A + +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK---VP-IKWMALESI 191
Query: 182 LG--YSYSVDWWSLGVTLFEILARG-RPFD 208
L Y++ D WS GVT++E++ G +P+D
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 4 GSSKFCGTSK-VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
GS F K + I + + K A+K + ++ + A K +L E ++ ++++P +
Sbjct: 28 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVMASVDNPHVCR 85
Query: 63 LW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT 121
L C L M + G L Y ++ + + + + ++ ++YL+
Sbjct: 86 LLGICLTSTVQLIM-QLMPFGCLLDY-----VREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 122 KHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
+ ++HRD+ N+L+ H ITDF +A +L + G K P I +A + +
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK---VP-IKWMALESI 195
Query: 182 LG--YSYSVDWWSLGVTLFEILARG-RPFD 208
L Y++ D WS GVT++E++ G +P+D
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 4 GSSKFCGTSK-VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
GS F K + I + + K A+K + ++ + A K +L E ++ ++++P +
Sbjct: 24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVMASVDNPHVCR 81
Query: 63 LW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT 121
L C L M + G L Y ++ + + + + ++ ++YL+
Sbjct: 82 LLGICLTSTVQLIM-QLMPFGCLLDY-----VREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 122 KHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
+ ++HRD+ N+L+ H ITDF +A +L + G K P I +A + +
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK---VP-IKWMALESI 191
Query: 182 LG--YSYSVDWWSLGVTLFEILARG-RPFD 208
L Y++ D WS GVT++E++ G +P+D
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 180
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 181 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 187
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 188 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 18/216 (8%)
Query: 8 FCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF 67
F G S+V + + + A+K + + RE + L HP +V ++
Sbjct: 22 FGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTG 81
Query: 68 QDEEDL----FMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ E ++V + + G LR + + T I + A + AL++
Sbjct: 82 EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM----TPKRAIEVIA-DACQALNFSHQNG 136
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS----GTKPYIAPEIFLVATD 179
IIHRD+KP NI++ + DF IA + ++ + + + GT Y++PE D
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--QARGD 194
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
V S D +SLG L+E+L PF S SV
Sbjct: 195 SVDARS---DVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 13/182 (7%)
Query: 40 DALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG 99
D + + E I+ L+HP +V L +EE +++ +L G+L +++ ++ V
Sbjct: 67 DNKEKFMSEAVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVL 125
Query: 100 TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLA 159
T + LY+ ++ A+ YL++ + +HRDI NIL+ + DF ++ +E+
Sbjct: 126 T----LVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY 181
Query: 160 TSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSVK 216
+ P +++PE + ++ + D W V ++EIL+ G+ PF N V
Sbjct: 182 KASVTRLPIKWMSPE-----SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 236
Query: 217 DV 218
V
Sbjct: 237 GV 238
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 4 GSSKFCGTSK-VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
GS F K + I + + K A+K + ++ + A K +L E ++ ++++P +
Sbjct: 25 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVMASVDNPHVCR 82
Query: 63 LW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT 121
L C L M + G L Y ++ + + + + ++ ++YL+
Sbjct: 83 LLGICLTSTVQLIM-QLMPFGCLLDY-----VREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 122 KHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
+ ++HRD+ N+L+ H ITDF +A +L + G K P I +A + +
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK---VP-IKWMALESI 192
Query: 182 LG--YSYSVDWWSLGVTLFEILARG-RPFD 208
L Y++ D WS GVT++E++ G +P+D
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
LRE+ I+ L HP +V +L +V++ L G L + + + R
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT-SMSG 164
Y G+ + + I+HR++K N+L+D++ + DF ++ + L++ S +G
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAG 201
Query: 165 TKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
T ++APE+ DE + D +S GV L+E+ +P+
Sbjct: 202 TPEWMAPEVL---RDE--PSNEKSDVYSFGVILWELATLQQPW 239
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 147 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 205
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 206 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 183
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 184 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 187
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 188 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 183
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 184 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 187
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 188 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 156 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 214
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 215 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 180
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 181 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 183
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 184 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 18/216 (8%)
Query: 8 FCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF 67
F G S+V + + + A+K + + RE + L HP +V ++
Sbjct: 22 FGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTG 81
Query: 68 QDEEDL----FMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ E ++V + + G LR + + T I + A + AL++
Sbjct: 82 EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM----TPKRAIEVIA-DACQALNFSHQNG 136
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS----GTKPYIAPEIFLVATD 179
IIHRD+KP NI++ + DF IA + ++ + + + GT Y++PE D
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--QARGD 194
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
V S D +SLG L+E+L PF S SV
Sbjct: 195 SVDARS---DVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEED 72
V I + K + + M K E+D L +++ EME++ + +H ++NL +
Sbjct: 46 VGIDKDKPKEAVTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 104
Query: 73 LFMVSDLLLGGDLRYHI----------TQDIKFYSVG--TRNDTIHLYAFELGLALDYLK 120
L+++ + G+LR ++ + DI T D + ++L ++YL
Sbjct: 105 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC-TYQLARGMEYLA 163
Query: 121 TKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVA 177
++ IHRD+ N+L+ E I DF +A + + + +G P ++APE
Sbjct: 164 SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-- 221
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARG 204
D V Y++ D WS GV ++EI G
Sbjct: 222 -DRV--YTHQSDVWSFGVLMWEIFTLG 245
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 182
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 183 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 182
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 183 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEED 72
V I + K + + M K E+D L +++ EME++ + +H ++NL +
Sbjct: 103 VGIDKDKPKEAVTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 161
Query: 73 LFMVSDLLLGGDLRYHI----------TQDIKFYSVG--TRNDTIHLYAFELGLALDYLK 120
L+++ + G+LR ++ + DI T D + ++L ++YL
Sbjct: 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC-TYQLARGMEYLA 220
Query: 121 TKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVA 177
++ IHRD+ N+L+ E I DF +A + + + +G P ++APE
Sbjct: 221 SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-- 278
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARG 204
D V Y++ D WS GV ++EI G
Sbjct: 279 -DRV--YTHQSDVWSFGVLMWEIFTLG 302
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 125 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 183
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 184 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEED 72
V I + K + + M K E+D L +++ EME++ + +H ++NL +
Sbjct: 57 VGIDKDKPKEAVTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115
Query: 73 LFMVSDLLLGGDLRYHI----------TQDIKFYSVG--TRNDTIHLYAFELGLALDYLK 120
L+++ + G+LR ++ + DI T D + ++L ++YL
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC-TYQLARGMEYLA 174
Query: 121 TKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVA 177
++ IHRD+ N+L+ E I DF +A + + + +G P ++APE
Sbjct: 175 SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-- 232
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARG 204
D V Y++ D WS GV ++EI G
Sbjct: 233 -DRV--YTHQSDVWSFGVLMWEIFTLG 256
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 23/207 (11%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEED 72
V I + K + + M K E+D L +++ EME++ + +H ++NL +
Sbjct: 57 VGIDKDKPKEAVTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115
Query: 73 LFMVSDLLLGGDLRYHI----------TQDIKFYSVG--TRNDTIHLYAFELGLALDYLK 120
L+++ + G+LR ++ + DI T D + ++L ++YL
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC-TYQLARGMEYLA 174
Query: 121 TKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVA 177
++ IHRD+ N+L+ E I DF +A + + + +G P ++APE
Sbjct: 175 SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALF-- 232
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARG 204
D V Y++ D WS GV ++EI G
Sbjct: 233 -DRV--YTHQSDVWSFGVLMWEIFTLG 256
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF +A +L + G K
Sbjct: 119 WCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK- 177
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 178 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 30/208 (14%)
Query: 11 TSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEI-LTTLEHPFLVNLWFCFQD 69
KV + K T++ +A+K + D K RE+E+ + P +V + +++
Sbjct: 75 NGKVLQIFNKRTQEKFALKXLQ-------DCPK-ARREVELHWRASQCPHIVRIVDVYEN 126
Query: 70 ----EEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKHII 125
+ L +V + L GG+L I QD + R + +G A+ YL + +I
Sbjct: 127 LYAGRKCLLIVXECLDGGELFSRI-QDRGDQAFTEREAS--EIXKSIGEAIQYLHSINIA 183
Query: 126 HRDIKPDNILLDEEGHAHI---TDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
HRD+KP+N+L + I TDF A + T+ T Y+AP EVL
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP--------EVL 235
Query: 183 G---YSYSVDWWSLGVTLFEILARGRPF 207
G Y S D WSLGV + +L PF
Sbjct: 236 GPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 23/190 (12%)
Query: 31 MHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI 89
M K E+D L +++ EME++ + +H ++NL + L+++ + G+LR ++
Sbjct: 61 MLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 119
Query: 90 ----------TQDIKFYSVG--TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLD 137
+ DI T D + ++L ++YL ++ IHRD+ N+L+
Sbjct: 120 RARRPPGMEYSYDINRVPEEQMTFKDLVSC-TYQLARGMEYLASQKCIHRDLTARNVLVT 178
Query: 138 EEGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLG 194
E I DF +A + + + +G P ++APE D V Y++ D WS G
Sbjct: 179 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF---DRV--YTHQSDVWSFG 233
Query: 195 VTLFEILARG 204
V ++EI G
Sbjct: 234 VLMWEIFTLG 243
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 23/190 (12%)
Query: 31 MHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI 89
M K E+D L +++ EME++ + +H ++NL + L+++ + G+LR ++
Sbjct: 66 MLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 124
Query: 90 ----------TQDIKFYSVG--TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLD 137
+ DI T D + ++L ++YL ++ IHRD+ N+L+
Sbjct: 125 RARRPPGMEYSYDINRVPEEQMTFKDLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVT 183
Query: 138 EEGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLG 194
E I DF +A + + + +G P ++APE D V Y++ D WS G
Sbjct: 184 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF---DRV--YTHQSDVWSFG 238
Query: 195 VTLFEILARG 204
V ++EI G
Sbjct: 239 VLMWEIFTLG 248
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 18/216 (8%)
Query: 8 FCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCF 67
F G S+V + + + A+K + + RE + L HP +V ++
Sbjct: 22 FGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTG 81
Query: 68 QDEEDL----FMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKTKH 123
+ E ++V + + G LR + + T I + A + AL++
Sbjct: 82 EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM----TPKRAIEVIA-DACQALNFSHQNG 136
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMS----GTKPYIAPEIFLVATD 179
IIHRD+KP NI++ + DF IA + ++ + + + GT Y++PE D
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE--QARGD 194
Query: 180 EVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
V S D +SLG L+E+L PF S SV
Sbjct: 195 SVDARS---DVYSLGCVLYEVLTGEPPFTGDSPDSV 227
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 25/200 (12%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRND 103
+ L E I+ H ++ L + + ++++ + G L + + +SV
Sbjct: 92 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV----- 146
Query: 104 TIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT- 160
+ L G+A + YL + +HRD+ NIL++ ++DF ++ VLE++ AT
Sbjct: 147 -LQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY 205
Query: 161 SMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIHSNTSVK 216
+ SG K + APE ++ + D WS G+ ++E++ G RP+ SN V
Sbjct: 206 TTSGGKIPIRWTAPEAI-----SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV- 259
Query: 217 DVKAI-----IYSPVHYPTA 231
+KAI + +P+ P+A
Sbjct: 260 -MKAINDGFRLPTPMDCPSA 278
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLE--ENQLATSMSGTKPYIAPEIFLVATDEV 181
IIHRD+K NILLDEE A + DF +A +++ + + ++ G +IAPE
Sbjct: 155 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKS-- 212
Query: 182 LGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDV 218
S D + GV L E++ R FD+ + DV
Sbjct: 213 ---SEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 79/190 (41%), Gaps = 20/190 (10%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGD----LRYHITQDIKFY 96
A K+ RE E+LT L+H +V + D + L MV + + GD LR H +
Sbjct: 60 ARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILV 119
Query: 97 SVGTRNDTIHL-------YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNI 149
R L A ++ + YL ++H +HRD+ N L+ I DF +
Sbjct: 120 DGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGM 179
Query: 150 AT-VLEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR- 205
+ V + P ++ PE + ++ D WS GV L+EI G+
Sbjct: 180 SRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK-----FTTESDVWSFGVILWEIFTYGKQ 234
Query: 206 PFDIHSNTSV 215
P+ SNT V
Sbjct: 235 PWFQLSNTEV 244
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++ + + G+L ++ + +
Sbjct: 51 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE----CNRQEV 106
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
+ + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ T
Sbjct: 107 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXT 165
Query: 161 SMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ +G K + APE +S D W+ GV L+EI G
Sbjct: 166 AHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 207
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 18/172 (10%)
Query: 47 REMEILT-TLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
RE+++L + EHP ++ +FC + + ++ L L+ ++ Q F +G T+
Sbjct: 66 REVQLLRESDEHPNVIR-YFCTEKDRQFQYIAIELCAATLQEYVEQK-DFAHLGLEPITL 123
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEG-----HAHITDFNIATVLEENQLA- 159
L GLA +L + +I+HRD+KP NIL+ A I+DF + L + +
Sbjct: 124 -LQQTTSGLA--HLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180
Query: 160 ---TSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPF 207
+ + GT+ +IAPE +++ D +Y+VD +S G + +++ G PF
Sbjct: 181 SRRSGVPGTEGWIAPE--MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF 230
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG-- 99
L+++L E +L + HP ++ L+ + L ++ + G LR + + K VG
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRK---VGPG 126
Query: 100 ---------------------TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDE 138
T D I +A+++ + YL ++HRD+ NIL+ E
Sbjct: 127 YLGSGGSRNSSSLDHPDERALTMGDLIS-FAWQISQGMQYLAEMKLVHRDLAARNILVAE 185
Query: 139 EGHAHITDFNIAT-VLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV--DWWSLGV 195
I+DF ++ V EE+ G P + +A + + + Y+ D WS GV
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIP-----VKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 196 TLFEILARG 204
L+EI+ G
Sbjct: 241 LLWEIVTLG 249
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG-- 99
L+++L E +L + HP ++ L+ + L ++ + G LR + + K VG
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRK---VGPG 126
Query: 100 ---------------------TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDE 138
T D I +A+++ + YL ++HRD+ NIL+ E
Sbjct: 127 YLGSGGSRNSSSLDHPDERALTMGDLIS-FAWQISQGMQYLAEMSLVHRDLAARNILVAE 185
Query: 139 EGHAHITDFNIAT-VLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV--DWWSLGV 195
I+DF ++ V EE+ G P + +A + + + Y+ D WS GV
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIP-----VKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 196 TLFEILARG 204
L+EI+ G
Sbjct: 241 LLWEIVTLG 249
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 22/178 (12%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGT 100
+++ L E ++ TL+H LV L +E ++++++ + G L + D G+
Sbjct: 220 SVEAFLAEANVMKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSD-----EGS 273
Query: 101 RNDTIHLYAFELGLA--LDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQL 158
+ L F +A + +++ ++ IHRD++ NIL+ I DF +A V + +
Sbjct: 274 KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPI 333
Query: 159 ATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
+ APE + ++ D WS G+ L EI+ GR P+ SN V
Sbjct: 334 K--------WTAPEAINFGS-----FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 378
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVG-- 99
L+++L E +L + HP ++ L+ + L ++ + G LR + + K VG
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRK---VGPG 126
Query: 100 ---------------------TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDE 138
T D I +A+++ + YL ++HRD+ NIL+ E
Sbjct: 127 YLGSGGSRNSSSLDHPDERALTMGDLIS-FAWQISQGMQYLAEMKLVHRDLAARNILVAE 185
Query: 139 EGHAHITDFNIAT-VLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSV--DWWSLGV 195
I+DF ++ V EE+ G P + +A + + + Y+ D WS GV
Sbjct: 186 GRKMKISDFGLSRDVYEEDSYVKRSQGRIP-----VKWMAIESLFDHIYTTQSDVWSFGV 240
Query: 196 TLFEILARG 204
L+EI+ G
Sbjct: 241 LLWEIVTLG 249
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTK- 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++ +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 167 --PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
++APE D V Y+ D WS GV L+EI + G
Sbjct: 204 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 238
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTK- 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++ +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 167 --PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
++APE D V Y+ D WS GV L+EI + G
Sbjct: 204 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 238
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 22/171 (12%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDL----RYHITQDIKFYS 97
++ L+E ++ ++HP LV L E +++ + + G+L R Q++
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV---- 108
Query: 98 VGTRNDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
+ + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ +
Sbjct: 109 ----SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
Query: 157 QLATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ +G K + APE +S D W+ GV L+EI G
Sbjct: 165 TY-TAHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 209
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTR 101
++ L+E ++ ++HP LV L E +++ + + G+L ++ + +
Sbjct: 53 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR----QEV 108
Query: 102 NDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT 160
+ + LY A ++ A++YL+ K+ IHRD+ N L+ E + DF ++ ++ + T
Sbjct: 109 SAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-T 167
Query: 161 SMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
+ +G K + APE +S D W+ GV L+EI G
Sbjct: 168 AHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 209
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTK- 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++ +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 167 --PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
++APE D V Y+ D WS GV L+EI + G
Sbjct: 213 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 247
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 42 LKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDL----RYHITQDIKFYS 97
++ L+E ++ ++HP LV L E +++++ + G+L R Q++
Sbjct: 260 VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV---- 315
Query: 98 VGTRNDTIHLY-AFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEEN 156
+ + LY A ++ A++YL+ K+ IHR++ N L+ E + DF ++ ++ +
Sbjct: 316 ----SAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371
Query: 157 QLATSMSGTK---PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
T+ +G K + APE +S D W+ GV L+EI G
Sbjct: 372 TY-TAHAGAKFPIKWTAPESLAYNK-----FSIKSDVWAFGVLLWEIATYG 416
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 38 ERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYS 97
E+D L + L E I++ H +V F++ +L+ GGDL+ + + S
Sbjct: 89 EQDEL-DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPS 147
Query: 98 VGTRN---DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGH---AHITDFNIAT 151
+ D +H+ A ++ YL+ H IHRDI N LL G A I DF +A
Sbjct: 148 QPSSLAMLDLLHV-ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
Query: 152 VLEE----NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RP 206
+ + +M K ++ PE F+ ++ D WS GV L+EI + G P
Sbjct: 207 DIYRASYYRKGGCAMLPVK-WMPPEAFMEGI-----FTSKTDTWSFGVLLWEIFSLGYMP 260
Query: 207 FDIHSNTSV 215
+ SN V
Sbjct: 261 YPSKSNQEV 269
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 19/102 (18%)
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIAT---------VLEENQLA------ 159
AL Y+ ++ IIHR++KP NI +DE + I DF +A L+ L
Sbjct: 128 ALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 160 TSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
TS GT Y+A E+ D Y+ +D +SLG+ FE +
Sbjct: 188 TSAIGTAXYVATEVL----DGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 6/163 (3%)
Query: 46 LREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTI 105
LRE+ I+ L HP +V +L +V++ L G L + + + R
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 106 HLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSM-SG 164
Y G+ + + I+HRD+K N+L+D++ + DF ++ + L + +G
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAG 201
Query: 165 TKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPF 207
T ++APE+ DE + D +S GV L+E+ +P+
Sbjct: 202 TPEWMAPEVL---RDE--PSNEKSDVYSFGVILWELATLQQPW 239
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEED 72
V I + K + + M K E+D L +++ EME++ + +H ++NL +
Sbjct: 57 VGIDKDKPKEAVTVAVKMLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115
Query: 73 LFMVSDLLLGGDLRYHI----------TQDIKFYSVG--TRNDTIHLYAFELGLALDYLK 120
L+++ G+LR ++ + DI T D + ++L ++YL
Sbjct: 116 LYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC-TYQLARGMEYLA 174
Query: 121 TKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVA 177
++ IHRD+ N+L+ E I DF +A + + + +G P ++APE
Sbjct: 175 SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-- 232
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARG 204
D V Y++ D WS GV ++EI G
Sbjct: 233 -DRV--YTHQSDVWSFGVLMWEIFTLG 256
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTK- 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++ +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 167 --PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
++APE D V Y+ D WS GV L+EI + G
Sbjct: 213 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 247
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 115 ALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE---ENQLATSMSGTKPYIAP 171
+++L H IHRDIK NILLDE A I+DF +A E + + + GT Y AP
Sbjct: 136 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP 195
Query: 172 EIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIH 210
E E+ S D +S GV L EI+ D H
Sbjct: 196 EAL---RGEITPKS---DIYSFGVVLLEIITGLPAVDEH 228
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 14 VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEED 72
V I + K + + M K E D L +++ EME++ + +H ++NL +
Sbjct: 57 VGIDKDKPKEAVTVAVKMLKDDATEED-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115
Query: 73 LFMVSDLLLGGDLRYHI----------TQDIKFYSVG--TRNDTIHLYAFELGLALDYLK 120
L+++ + G+LR ++ + DI T D + ++L ++YL
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC-TYQLARGMEYLA 174
Query: 121 TKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVA 177
++ IHRD+ N+L+ E I DF +A + + + +G P ++APE
Sbjct: 175 SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF-- 232
Query: 178 TDEVLGYSYSVDWWSLGVTLFEILARG 204
D V Y++ D WS GV ++EI G
Sbjct: 233 -DRV--YTHQSDVWSFGVLMWEIFTLG 256
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 23/190 (12%)
Query: 31 MHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI 89
M K E+D L +++ EME++ + +H ++NL + L+++ G+LR ++
Sbjct: 74 MLKDDATEKD-LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYL 132
Query: 90 ----------TQDIKFYSVG--TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLD 137
+ DI T D + ++L ++YL ++ IHRD+ N+L+
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 138 EEGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLG 194
E I DF +A + + + +G P ++APE D V Y++ D WS G
Sbjct: 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF---DRV--YTHQSDVWSFG 246
Query: 195 VTLFEILARG 204
V ++EI G
Sbjct: 247 VLMWEIFTLG 256
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 4 GSSKFCGTSK-VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
GS F K + I + + K A+K + ++ + A K +L E ++ ++++P +
Sbjct: 28 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVMASVDNPHVCR 85
Query: 63 LW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT 121
L C L M + G L Y ++ + + + + ++ ++YL+
Sbjct: 86 LLGICLTSTVQLIM-QLMPFGCLLDY-----VREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 122 KHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
+ ++HRD+ N+L+ H ITDF A +L + G K P I +A + +
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK---VP-IKWMALESI 195
Query: 182 LG--YSYSVDWWSLGVTLFEILARG-RPFD 208
L Y++ D WS GVT++E++ G +P+D
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF A +L + G K
Sbjct: 122 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK- 180
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 181 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 4 GSSKFCGTSK-VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
GS F K + I + + K A+K + ++ + A K +L E ++ ++++P +
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVMASVDNPHVCR 83
Query: 63 LW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT 121
L C L M + G L Y ++ + + + + ++ ++YL+
Sbjct: 84 LLGICLTSTVQLIM-QLMPFGCLLDY-----VREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 122 KHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
+ ++HRD+ N+L+ H ITDF A +L + G K P I +A + +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK---VP-IKWMALESI 193
Query: 182 LG--YSYSVDWWSLGVTLFEILARG-RPFD 208
L Y++ D WS GVT++E++ G +P+D
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 38 ERDALKNVLREMEILTTLEHPFLVNLWFCFQD----EEDLFMVSDLLLGGDLRYHITQDI 93
ER K E E L L+HP +V + ++ ++ + +V++L G L+ ++
Sbjct: 68 ERQRFKE---EAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYL---- 120
Query: 94 KFYSVGTRNDTIHLYAFEL--GLALDYLKTKHIIHRDIKPDNILL-DEEGHAHITDFNIA 150
K + V + + + ++ GL + +T IIHRD+K DNI + G I D +A
Sbjct: 121 KRFKV-XKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179
Query: 151 TVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIH 210
T L+ A ++ GT + APE + DE SVD ++ G E P+
Sbjct: 180 T-LKRASFAKAVIGTPEFXAPEXYEEKYDE------SVDVYAFGXCXLEXATSEYPYSEC 232
Query: 211 SNTS 214
N +
Sbjct: 233 QNAA 236
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF A +L + G K
Sbjct: 124 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK- 182
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 183 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 4 GSSKFCGTSK-VCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVN 62
GS F K + I + + K A+K + ++ + A K +L E ++ ++++P +
Sbjct: 26 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILDEAYVMASVDNPHVCR 83
Query: 63 LW-FCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDTIHLYAFELGLALDYLKT 121
L C L M + G L Y ++ + + + + ++ ++YL+
Sbjct: 84 LLGICLTSTVQLIM-QLMPFGCLLDY-----VREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 122 KHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEV 181
+ ++HRD+ N+L+ H ITDF A +L + G K P I +A + +
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK---VP-IKWMALESI 193
Query: 182 LG--YSYSVDWWSLGVTLFEILARG-RPFD 208
L Y++ D WS GVT++E++ G +P+D
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKP 167
+ ++ ++YL+ + ++HRD+ N+L+ H ITDF A +L + G K
Sbjct: 129 WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGK- 187
Query: 168 YIAPEIFLVATDEVLG--YSYSVDWWSLGVTLFEILARG-RPFD 208
P I +A + +L Y++ D WS GVT++E++ G +P+D
Sbjct: 188 --VP-IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 48 EMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT--- 104
E + L+HP +V L ++ L M+ GDL + VG+ +D
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 121
Query: 105 ---------IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE 155
+HL A ++ ++YL + H++H+D+ N+L+ ++ + I+D + +
Sbjct: 122 KSALEPPDFVHLVA-QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 156 NQ----LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIH 210
L S+ + ++APE + +S D WS GV L+E+ + G +P+ +
Sbjct: 181 ADYYKLLGNSLLPIR-WMAPEAIMYGK-----FSIDSDIWSYGVVLWEVFSYGLQPYCGY 234
Query: 211 SNTSV 215
SN V
Sbjct: 235 SNQDV 239
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTK- 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++ +
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 167 --PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
++APE D V Y+ D WS GV L+EI + G
Sbjct: 213 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 247
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 28/205 (13%)
Query: 48 EMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT--- 104
E + L+HP +V L ++ L M+ GDL + VG+ +D
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138
Query: 105 ---------IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEE 155
+HL A ++ ++YL + H++H+D+ N+L+ ++ + I+D + +
Sbjct: 139 KSALEPPDFVHLVA-QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 156 NQ----LATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG-RPFDIH 210
L S+ + ++APE + +S D WS GV L+E+ + G +P+ +
Sbjct: 198 ADYYKLLGNSLLPIR-WMAPEAIMYGK-----FSIDSDIWSYGVVLWEVFSYGLQPYCGY 251
Query: 211 SNTSVKDV---KAIIYSPVHYPTAW 232
SN V ++ + ++ P P AW
Sbjct: 252 SNQDVVEMIRNRQVLPCPDDCP-AW 275
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 91/186 (48%), Gaps = 26/186 (13%)
Query: 47 REMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQD----IKFYSVGTRN 102
RE+ I++ L HP +V L+ + MV + + GDL YH D IK +SV R
Sbjct: 72 REVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDL-YHRLLDKAHPIK-WSVKLR- 126
Query: 103 DTIHLYAFELGLALDYLKTKH--IIHRDIKPDNIL---LDEEGH--AHITDFNIATVLEE 155
++ L ++Y++ ++ I+HRD++ NI LDE A + DF+++ +
Sbjct: 127 -----LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QS 179
Query: 156 NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
+ + G ++APE + A +E Y+ D +S + L+ IL PFD +S +
Sbjct: 180 VHSVSGLLGNFQWMAPET-IGAEEE--SYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 216 KDVKAI 221
K + I
Sbjct: 237 KFINMI 242
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTK- 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++ +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARL 212
Query: 167 --PYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
++APE D V Y+ D WS GV L+EI + G
Sbjct: 213 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 247
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTK 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 167 P--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
P ++APE D V Y+ D WS GV L+EI + G
Sbjct: 204 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 238
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 90/186 (48%), Gaps = 26/186 (13%)
Query: 47 REMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQD----IKFYSVGTRN 102
RE+ I++ L HP +V L+ + MV + + GDL YH D IK +SV R
Sbjct: 72 REVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDL-YHRLLDKAHPIK-WSVKLR- 126
Query: 103 DTIHLYAFELGLALDYLKTKH--IIHRDIKPDNIL---LDEEGH--AHITDFNIATVLEE 155
++ L ++Y++ ++ I+HRD++ NI LDE A + DF ++ +
Sbjct: 127 -----LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QS 179
Query: 156 NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
+ + G ++APE + A +E Y+ D +S + L+ IL PFD +S +
Sbjct: 180 VHSVSGLLGNFQWMAPET-IGAEEE--SYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 216 KDVKAI 221
K + I
Sbjct: 237 KFINMI 242
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTK 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 167 P--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
P ++APE D V Y+ D WS GV L+EI + G
Sbjct: 204 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 238
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 39/148 (26%)
Query: 95 FYSVGTRND-------TIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDE--------- 138
Y + TRN+ I LY E+ AL+YL+ + H D+KP+NILLD+
Sbjct: 122 LYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLIT 181
Query: 139 -----EGHA-----------HITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
+G + DF AT ++ S+ T+ Y APE+ L L
Sbjct: 182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATF--KSDYHGSIINTRQYRAPEVIL-----NL 234
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFDIH 210
G+ S D WS G L E+ F H
Sbjct: 235 GWDVSSDMWSFGCVLAELYTGSLLFRTH 262
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 44 NVLREMEILTTLEHPFLVNLWFCFQDEED-----LFMVSDLLLGGDLRYHITQDIKFYSV 98
+ RE+ +L L+HP +++L F D LF ++ L +++H V
Sbjct: 64 SACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPV 123
Query: 99 GTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILL----DEEGHAHITDFNIATVLE 154
+ +++ + YL ++HRD+KP NIL+ E G I D A +
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF- 182
Query: 155 ENQLATSMSGTKP------YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
N ++ P Y APE+ L A Y+ ++D W++G E+L
Sbjct: 183 -NSPLKPLADLDPVVVTFWYRAPELLLGARH----YTKAIDIWAIGCIFAELL 230
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTK 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 167 P--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
P ++APE D V Y+ D WS GV L+EI + G
Sbjct: 256 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 290
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTK 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 212
Query: 167 P--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
P ++APE D V Y+ D WS GV L+EI + G
Sbjct: 213 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 247
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTK 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 249
Query: 167 P--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
P ++APE D V Y+ D WS GV L+EI + G
Sbjct: 250 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 284
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTK 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 167 P--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
P ++APE D V Y+ D WS GV L+EI + G
Sbjct: 258 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 292
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTK 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 214
Query: 167 P--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
P ++APE D V Y+ D WS GV L+EI + G
Sbjct: 215 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 249
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTK 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 167 P--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
P ++APE D V Y+ D WS GV L+EI + G
Sbjct: 265 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 299
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 26/186 (13%)
Query: 47 REMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQD----IKFYSVGTRN 102
RE+ I++ L HP +V L+ + MV + + GDL YH D IK +SV R
Sbjct: 72 REVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDL-YHRLLDKAHPIK-WSVKLR- 126
Query: 103 DTIHLYAFELGLALDYLKTKH--IIHRDIKPDNIL---LDEEGH--AHITDFNIATVLEE 155
++ L ++Y++ ++ I+HRD++ NI LDE A + DF T +
Sbjct: 127 -----LMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF--GTSQQS 179
Query: 156 NQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
+ + G ++APE + A +E Y+ D +S + L+ IL PFD +S +
Sbjct: 180 VHSVSGLLGNFQWMAPET-IGAEEE--SYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 216 KDVKAI 221
K + I
Sbjct: 237 KFINMI 242
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTK 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 167 P--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
P ++APE D V Y+ D WS GV L+EI + G
Sbjct: 263 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 297
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTK 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 167 P--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
P ++APE D V Y+ D WS GV L+EI + G
Sbjct: 209 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 243
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 45 VLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSVGTRNDT 104
V +E+ IL H +++L F+ E+L M+ + + G D I + I +
Sbjct: 48 VKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLD----IFERINTSAFELNERE 103
Query: 105 IHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA--HITDFNIATVLEENQLATSM 162
I Y ++ AL +L + +I H DI+P+NI+ + I +F A L+ +
Sbjct: 104 IVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL 163
Query: 163 SGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSV 215
Y APE V +V+ S + D WSLG ++ +L+ PF +N +
Sbjct: 164 FTAPEYYAPE---VHQHDVV--STATDMWSLGTLVYVLLSGINPFLAETNQQI 211
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 108 YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTK 166
Y+F++ +++L ++ IHRD+ NILL E+ I DF +A + ++
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 167 P--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
P ++APE D V Y+ D WS GV L+EI + G
Sbjct: 209 PLKWMAPETIF---DRV--YTIQSDVWSFGVLLWEIFSLG 243
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 23/190 (12%)
Query: 31 MHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI 89
M K E+D L +++ EME++ + +H ++ L + L+++ + G+LR ++
Sbjct: 74 MLKDDATEKD-LSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 90 ----------TQDIKFYSVG--TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLD 137
+ DI T D + ++L ++YL ++ IHRD+ N+L+
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 138 EEGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLG 194
E I DF +A + + + +G P ++APE D V Y++ D WS G
Sbjct: 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF---DRV--YTHQSDVWSFG 246
Query: 195 VTLFEILARG 204
V ++EI G
Sbjct: 247 VLMWEIFTLG 256
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 23/190 (12%)
Query: 31 MHKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHI 89
M K E+D L +++ EME++ + +H +++L + L+++ + G+LR ++
Sbjct: 74 MLKDDATEKD-LSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 90 ----------TQDIKFYSVG--TRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLD 137
+ DI T D + ++L ++YL ++ IHRD+ N+L+
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSC-TYQLARGMEYLASQKCIHRDLAARNVLVT 191
Query: 138 EEGHAHITDFNIATVLEE-NQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLG 194
E I DF +A + + + +G P ++APE D V Y++ D WS G
Sbjct: 192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF---DRV--YTHQSDVWSFG 246
Query: 195 VTLFEILARG 204
V ++EI G
Sbjct: 247 VLMWEIFTLG 256
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEE--NQLATSMS---GTKPYIAPEIF--LV 176
I HRD+K NIL+ + G I D +A + + NQL + GTK Y+APE+ +
Sbjct: 134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193
Query: 177 ATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPV 226
D Y VD W+ G+ L+E+ R + SN V+D K Y V
Sbjct: 194 QVDCFDSYK-RVDIWAFGLVLWEVARR-----MVSNGIVEDYKPPFYDVV 237
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEE--NQLATSMS---GTKPYIAPEIF--LV 176
I HRD+K NIL+ + G I D +A + + NQL + GTK Y+APE+ +
Sbjct: 134 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193
Query: 177 ATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPV 226
D Y VD W+ G+ L+E+ R + SN V+D K Y V
Sbjct: 194 QVDCFDSYK-RVDIWAFGLVLWEVARR-----MVSNGIVEDYKPPFYDVV 237
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEE--NQLATSMS---GTKPYIAPEIF--LV 176
I HRD+K NIL+ + G I D +A + + NQL + GTK Y+APE+ +
Sbjct: 163 IAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 222
Query: 177 ATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPV 226
D Y VD W+ G+ L+E+ R + SN V+D K Y V
Sbjct: 223 QVDCFDSYK-RVDIWAFGLVLWEVARR-----MVSNGIVEDYKPPFYDVV 266
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQM-YAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLV 61
G F K I KKD +M A+K M + +D ++ E+E+L L HP ++
Sbjct: 24 GEGNFGQVLKARI--KKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 62 NLWFCFQDEEDLFMVSDLLLGGDLRYHITQ------DIKFYSVGTRNDTIHL-----YAF 110
NL + L++ + G+L + + D F + T+ +A
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 111 ELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIA 170
++ +DYL K IHRD+ NIL+ E A I DF ++ E T ++A
Sbjct: 140 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMA 199
Query: 171 PEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
E + Y+ + D WS GV L+EI++ G
Sbjct: 200 IESLNYSV-----YTTNSDVWSYGVLLWEIVSLG 228
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 57 HPFLVNLWFCFQDEEDLFMVSDLLLGG-DLRYHITQDIKFYSVGTRNDTIHLYAFELGLA 115
HP ++ L F+ +E +V + L DL +IT+ +R + ++ A
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSR-----CFFGQVVAA 151
Query: 116 LDYLKTKHIIHRDIKPDNILLD-EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIF 174
+ + ++ ++HRDIK +NIL+D G A + DF +L + T GT+ Y PE
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY-TDFDGTRVYSPPE-- 208
Query: 175 LVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDIHSNTSVKDVKAIIYSPVHYPT 230
++ + +V WSLG+ L++++ PF+ +D + I+ + +H+P
Sbjct: 209 WISRHQYHALPATV--WSLGILLYDMVCGDIPFE-------RD-QEILEAELHFPA 254
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQM-YAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLV 61
G F K I KKD +M A+K M + +D ++ E+E+L L HP ++
Sbjct: 34 GEGNFGQVLKARI--KKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 62 NLWFCFQDEEDLFMVSDLLLGGDLRYHITQ------DIKFYSVGTRNDTIHL-----YAF 110
NL + L++ + G+L + + D F + T+ +A
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 111 ELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIA 170
++ +DYL K IHRD+ NIL+ E A I DF ++ E T ++A
Sbjct: 150 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMA 209
Query: 171 PEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
E + Y+ + D WS GV L+EI++ G
Sbjct: 210 IESLNYSV-----YTTNSDVWSYGVLLWEIVSLG 238
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 38 ERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFY 96
E++AL + E++I++ L +H +VNL + ++++ GDL + + +
Sbjct: 92 EKEAL---MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVL 148
Query: 97 ----------SVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITD 146
S + D +H ++ ++ + +L +K+ IHRD+ N+LL A I D
Sbjct: 149 ETDPAFAIANSTASTRDLLH-FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGD 207
Query: 147 FNIAT-VLEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILAR 203
F +A ++ ++ + P ++APE Y+ D WS G+ L+EI +
Sbjct: 208 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV-----YTVQSDVWSYGILLWEIFSL 262
Query: 204 G 204
G
Sbjct: 263 G 263
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 22/209 (10%)
Query: 23 KQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLG 82
K + A+K + ++ A ++ RE E+LT L+H +V + + L MV + +
Sbjct: 42 KMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRH 98
Query: 83 GDLRYHITQ---DIKFYSVGTRNDTIHL-------YAFELGLALDYLKTKHIIHRDIKPD 132
GDL + D K + G L A ++ + YL H +HRD+
Sbjct: 99 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 158
Query: 133 NILLDEEGHAHITDFNIAT-VLEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVD 189
N L+ + I DF ++ + + P ++ PE L ++ D
Sbjct: 159 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK-----FTTESD 213
Query: 190 WWSLGVTLFEILARGR-PFDIHSNTSVKD 217
WS GV L+EI G+ P+ SNT D
Sbjct: 214 VWSFGVVLWEIFTYGKQPWYQLSNTEAID 242
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 22/209 (10%)
Query: 23 KQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLG 82
K + A+K + ++ A ++ RE E+LT L+H +V + + L MV + +
Sbjct: 48 KMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRH 104
Query: 83 GDLRYHITQ---DIKFYSVGTRNDTIHL-------YAFELGLALDYLKTKHIIHRDIKPD 132
GDL + D K + G L A ++ + YL H +HRD+
Sbjct: 105 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 164
Query: 133 NILLDEEGHAHITDFNIAT-VLEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVD 189
N L+ + I DF ++ + + P ++ PE L ++ D
Sbjct: 165 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK-----FTTESD 219
Query: 190 WWSLGVTLFEILARGR-PFDIHSNTSVKD 217
WS GV L+EI G+ P+ SNT D
Sbjct: 220 VWSFGVVLWEIFTYGKQPWYQLSNTEAID 248
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 86/209 (41%), Gaps = 22/209 (10%)
Query: 23 KQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLG 82
K + A+K + ++ A ++ RE E+LT L+H +V + + L MV + +
Sbjct: 71 KMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRH 127
Query: 83 GDLRYHITQ---DIKFYSVGTRNDTIHL-------YAFELGLALDYLKTKHIIHRDIKPD 132
GDL + D K + G L A ++ + YL H +HRD+
Sbjct: 128 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 187
Query: 133 NILLDEEGHAHITDFNIAT-VLEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVD 189
N L+ + I DF ++ + + P ++ PE L ++ D
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK-----FTTESD 242
Query: 190 WWSLGVTLFEILARGR-PFDIHSNTSVKD 217
WS GV L+EI G+ P+ SNT D
Sbjct: 243 VWSFGVVLWEIFTYGKQPWYQLSNTEAID 271
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 26/137 (18%)
Query: 109 AFELGLALDYLKTKHIIHRDIKPDNILL---------------DEEG----HAHITDFNI 149
AF+L A+ +L + H D+KP+NIL DE + DF
Sbjct: 143 AFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGS 202
Query: 150 ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDI 209
AT E+ +++ T+ Y APE+ L LG+S D WS+G +FE F
Sbjct: 203 ATFDHEHH--STIVSTRHYRAPEVIL-----ELGWSQPCDVWSIGCIIFEYYVGFTLFQT 255
Query: 210 HSNTSVKDVKAIIYSPV 226
H N + I P+
Sbjct: 256 HDNREHLAMMERILGPI 272
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 86/182 (47%), Gaps = 25/182 (13%)
Query: 38 ERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQD---- 92
E++AL + E++I++ L +H +VNL + ++++ GDL + +
Sbjct: 92 EKEAL---MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVL 148
Query: 93 -------IKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHIT 145
I ++ TR D +H ++ ++ + +L +K+ IHRD+ N+LL A I
Sbjct: 149 ETDPAFAIANSTLSTR-DLLH-FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG 206
Query: 146 DFNIAT-VLEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILA 202
DF +A ++ ++ + P ++APE Y+ D WS G+ L+EI +
Sbjct: 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV-----YTVQSDVWSYGILLWEIFS 261
Query: 203 RG 204
G
Sbjct: 262 LG 263
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 22/214 (10%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQM-YAMKYMHKSQCIERDALKNVLREMEILTTL-EHPFLV 61
G F K I KKD +M A+K M + +D ++ E+E+L L HP ++
Sbjct: 31 GEGNFGQVLKARI--KKDGLRMDAAIKRM--KEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 62 NLWFCFQDEEDLFMVSDLLLGGDLRYHITQ------DIKFYSVGTRNDTIHL-----YAF 110
NL + L++ + G+L + + D F + T+ +A
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 111 ELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIA 170
++ +DYL K IHR++ NIL+ E A I DF ++ E T ++A
Sbjct: 147 DVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMA 206
Query: 171 PEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
E + Y+ + D WS GV L+EI++ G
Sbjct: 207 IESLNYSV-----YTTNSDVWSYGVLLWEIVSLG 235
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT---SMSGTKPYIAPEIFLVATDE 180
I HRDIK N+LL A I DF +A E + A GT+ Y+APE+ A +
Sbjct: 152 ISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINF 211
Query: 181 VLGYSYSVDWWSLGVTLFEILAR 203
+D +++G+ L+E+ +R
Sbjct: 212 QRDAFLRIDMYAMGLVLWELASR 234
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 21/116 (18%)
Query: 111 ELGLALDYLKTKHIIHRDIKPDNILL--------DEEGHAH-----ITDFNIATVLEENQ 157
++ + +L + IIHRD+KP NIL+ D++ A I+DF + L+ Q
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 158 LA-----TSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PF 207
+ SGT + APE+ +T L + S+D +S+G + IL++G+ PF
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRL--TRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 21/116 (18%)
Query: 111 ELGLALDYLKTKHIIHRDIKPDNILL--------DEEGHAH-----ITDFNIATVLEENQ 157
++ + +L + IIHRD+KP NIL+ D++ A I+DF + L+ Q
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 158 LA-----TSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGR-PF 207
+ SGT + APE+ +T L + S+D +S+G + IL++G+ PF
Sbjct: 201 XXFRXNLNNPSGTSGWRAPELLEESTKRRL--TRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 18/192 (9%)
Query: 37 IERD---ALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDI 93
IERD LK RE+ H +V L +++ L G L Y + +D
Sbjct: 65 IERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL-YSVVRDA 123
Query: 94 KFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITD---FNIA 150
K V N T + A E+ + YL K I+H+D+K N+ D G ITD F+I+
Sbjct: 124 KI--VLDVNKTRQI-AQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179
Query: 151 TVLEENQLATSM---SGTKPYIAPEIFLVAT----DEVLGYSYSVDWWSLGVTLFEILAR 203
VL+ + + +G ++APEI + ++ L +S D ++LG +E+ AR
Sbjct: 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAR 239
Query: 204 GRPFDIHSNTSV 215
PF ++
Sbjct: 240 EWPFKTQPAEAI 251
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 26/118 (22%)
Query: 101 RNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAH----------------- 143
R D I A+++ ++++L + + H D+KP+NIL + +
Sbjct: 116 RLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD 175
Query: 144 --ITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFE 199
+ DF AT +E+ +++ T+ Y APE+ L LG+S D WS+G L E
Sbjct: 176 IKVVDFGSATYDDEHH--STLVSTRHYRAPEVIL-----ALGWSQPCDVWSIGCILIE 226
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 47/193 (24%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDI------KFY 96
K +LRE+ IL L+ +++ L DL + DLL +L +I +I K +
Sbjct: 72 KRILREITILNRLKSDYIIRL-------HDLIIPEDLLKFDEL--YIVLEIADSDLKKLF 122
Query: 97 SVGTRNDTIHLYA--FELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
H+ + L L ++ IIHRD+KP N LL+++ I DF +A +
Sbjct: 123 KTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTIN 182
Query: 155 EN--------------------------QLATSMSGTKPYIAPEIFLVATDEVLGYSYSV 188
+ + TS T+ Y APE+ L+ + Y+ S+
Sbjct: 183 SDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQEN----YTNSI 238
Query: 189 DWWSLGVTLFEIL 201
D WS G E+L
Sbjct: 239 DIWSTGCIFAELL 251
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 93/220 (42%), Gaps = 11/220 (5%)
Query: 4 GSSKFCGTSKVCIVQKKDTKQMYAMKYMHKSQCIERDALKNVLREMEILTTLEHPF---L 60
G +F G+ + ++++D + M K+ I ++ LRE + +HP L
Sbjct: 32 GKGEF-GSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 61 VNLWFCFQDEEDL---FMVSDLLLGGDLR-YHITQDIKFYSVGTRNDTIHLYAFELGLAL 116
V + + + L ++ + GDL + + I T+ + ++ +
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 117 DYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLV 176
+YL +++ IHRD+ N +L E+ + DF ++ + +K +
Sbjct: 151 EYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALES 210
Query: 177 ATDEVLGYSYSVDWWSLGVTLFEILARGR-PFDIHSNTSV 215
D + Y+ D W+ GVT++EI+ RG+ P+ N +
Sbjct: 211 LADNL--YTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI 248
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 126 HRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT--SMSGTKPYIAPEIFLVATDEVLG 183
HRD+KP+NIL+ + A++ DF IA+ + +L + GT Y APE F +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESH----- 211
Query: 184 YSYSVDWWSLGVTLFEILARGRPF 207
+Y D ++L L+E L P+
Sbjct: 212 ATYRADIYALTCVLYECLTGSPPY 235
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 26/137 (18%)
Query: 109 AFELGLALDYLKTKHIIHRDIKPDNILL---------------DEEG----HAHITDFNI 149
A++L AL +L + H D+KP+NIL +E+ + DF
Sbjct: 138 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 197
Query: 150 ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDI 209
AT E+ T++ T+ Y PE+ L LG++ D WS+G LFE F
Sbjct: 198 ATFDHEHH--TTIVATRHYRPPEVIL-----ELGWAQPCDVWSIGCILFEYYRGFTLFQT 250
Query: 210 HSNTSVKDVKAIIYSPV 226
H N + I P+
Sbjct: 251 HENREHLVMMEKILGPI 267
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 25/183 (13%)
Query: 38 ERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDL----RYHITQD 92
E++AL + E++I++ L +H +VNL + ++++ GDL R
Sbjct: 92 EKEAL---MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPG 148
Query: 93 IKFYSVGTRN--------DTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHI 144
+++ + N D +H ++ ++ + +L +K+ IHRD+ N+LL A I
Sbjct: 149 LEYSYNPSHNPEEQLSSRDLLH-FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKI 207
Query: 145 TDFNIAT-VLEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
DF +A ++ ++ + P ++APE Y+ D WS G+ L+EI
Sbjct: 208 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV-----YTVQSDVWSYGILLWEIF 262
Query: 202 ARG 204
+ G
Sbjct: 263 SLG 265
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 26/137 (18%)
Query: 109 AFELGLALDYLKTKHIIHRDIKPDNILL---------------DEEG----HAHITDFNI 149
A++L AL +L + H D+KP+NIL +E+ + DF
Sbjct: 161 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 220
Query: 150 ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDI 209
AT E+ T++ T+ Y PE+ L LG++ D WS+G LFE F
Sbjct: 221 ATFDHEHH--TTIVATRHYRPPEVIL-----ELGWAQPCDVWSIGCILFEYYRGFTLFQT 273
Query: 210 HSNTSVKDVKAIIYSPV 226
H N + I P+
Sbjct: 274 HENREHLVMMEKILGPI 290
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIATVLEENQLAT---SMSGTKPYIAPEIFLVATDE 180
I HRD K N+LL + A + DF +A E + GT+ Y+APE+ A +
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINF 203
Query: 181 VLGYSYSVDWWSLGVTLFEILARGRPFD 208
+D +++G+ L+E+++R + D
Sbjct: 204 QRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 57/137 (41%), Gaps = 26/137 (18%)
Query: 109 AFELGLALDYLKTKHIIHRDIKPDNILL---------------DEEG----HAHITDFNI 149
A++L AL +L + H D+KP+NIL +E+ + DF
Sbjct: 129 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 188
Query: 150 ATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFDI 209
AT E+ T++ T+ Y PE+ L LG++ D WS+G LFE F
Sbjct: 189 ATFDHEHH--TTIVATRHYRPPEVIL-----ELGWAQPCDVWSIGCILFEYYRGFTLFQT 241
Query: 210 HSNTSVKDVKAIIYSPV 226
H N + I P+
Sbjct: 242 HENREHLVMMEKILGPI 258
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 33/236 (13%)
Query: 19 KKDTKQMYAMKYMHKS-QCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMV 76
K D A+K + S ER+AL + E+++L+ L H +VNL ++
Sbjct: 49 KSDAAMTVAVKMLKPSAHLTEREAL---MSELKVLSYLGNHMNIVNLLGACTIGGPTLVI 105
Query: 77 SDLLLGGDLRYHITQDIKFYSVGTRNDTIHL-------------YAFELGLALDYLKTKH 123
++ GDL + + + + I +++++ + +L +K+
Sbjct: 106 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN 165
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTKP--YIAPEIFLVATDE 180
IHRD+ NILL I DF +A + ++ + P ++APE
Sbjct: 166 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV-- 223
Query: 181 VLGYSYSVDWWSLGVTLFEILA------RGRPFDIHSNTSVKDVKAIIYSPVHYPT 230
Y++ D WS G+ L+E+ + G P D +K+ ++ SP H P
Sbjct: 224 ---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML-SPEHAPA 275
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 85/195 (43%), Gaps = 30/195 (15%)
Query: 32 HKSQCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDL----- 85
K+ ER+AL + E++++T L H +VNL ++++ + GDL
Sbjct: 85 EKADSSEREAL---MSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLR 141
Query: 86 --RYHITQDIKFYSVGTR-----------NDTIHLYAFELGLALDYLKTKHIIHRDIKPD 132
R ++D Y R + + +A+++ +++L+ K +HRD+
Sbjct: 142 SKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 201
Query: 133 NILLDEEGHAHITDFNIAT-VLEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVD 189
N+L+ I DF +A ++ ++ + P ++APE Y+ D
Sbjct: 202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI-----YTIKSD 256
Query: 190 WWSLGVTLFEILARG 204
WS G+ L+EI + G
Sbjct: 257 VWSYGILLWEIFSLG 271
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 33/236 (13%)
Query: 19 KKDTKQMYAMKYMHKS-QCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMV 76
K D A+K + S ER+AL + E+++L+ L H +VNL ++
Sbjct: 72 KSDAAMTVAVKMLKPSAHLTEREAL---MSELKVLSYLGNHMNIVNLLGACTIGGPTLVI 128
Query: 77 SDLLLGGDLRYHITQDIKFYSVGTRNDTIHL-------------YAFELGLALDYLKTKH 123
++ GDL + + + + I +++++ + +L +K+
Sbjct: 129 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN 188
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTKP--YIAPEIFLVATDE 180
IHRD+ NILL I DF +A + ++ + P ++APE
Sbjct: 189 CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCV-- 246
Query: 181 VLGYSYSVDWWSLGVTLFEILA------RGRPFDIHSNTSVKDVKAIIYSPVHYPT 230
Y++ D WS G+ L+E+ + G P D +K+ ++ SP H P
Sbjct: 247 ---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML-SPEHAPA 298
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 19/177 (10%)
Query: 38 ERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQ----- 91
E++AL + E++I++ L +H +VNL + ++++ GDL + +
Sbjct: 84 EKEAL---MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAD 140
Query: 92 -DIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIA 150
D + D +H ++ ++ + +L +K+ IHRD+ N+LL A I DF +A
Sbjct: 141 LDKEDGRPLELRDLLH-FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 199
Query: 151 T-VLEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
++ ++ + P ++APE Y+ D WS G+ L+EI + G
Sbjct: 200 RDIMNDSNYIVKGNARLPVKWMAPESIFDCV-----YTVQSDVWSYGILLWEIFSLG 251
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 33/236 (13%)
Query: 19 KKDTKQMYAMKYMHKS-QCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMV 76
K D A+K + S ER+AL + E+++L+ L H +VNL ++
Sbjct: 65 KSDAAMTVAVKMLKPSAHLTEREAL---MSELKVLSYLGNHMNIVNLLGACTIGGPTLVI 121
Query: 77 SDLLLGGDLRYHITQDIKFYSVGTRNDTIHL-------------YAFELGLALDYLKTKH 123
++ GDL + + + + I +++++ + +L +K+
Sbjct: 122 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN 181
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTKP--YIAPEIFLVATDE 180
IHRD+ NILL I DF +A + ++ + P ++APE
Sbjct: 182 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV-- 239
Query: 181 VLGYSYSVDWWSLGVTLFEILA------RGRPFDIHSNTSVKDVKAIIYSPVHYPT 230
Y++ D WS G+ L+E+ + G P D +K+ ++ SP H P
Sbjct: 240 ---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML-SPEHAPA 291
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 33/236 (13%)
Query: 19 KKDTKQMYAMKYMHKS-QCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMV 76
K D A+K + S ER+AL + E+++L+ L H +VNL ++
Sbjct: 72 KSDAAMTVAVKMLKPSAHLTEREAL---MSELKVLSYLGNHMNIVNLLGACTIGGPTLVI 128
Query: 77 SDLLLGGDLRYHITQDIKFYSVGTRNDTIHL-------------YAFELGLALDYLKTKH 123
++ GDL + + + + I +++++ + +L +K+
Sbjct: 129 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN 188
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTKP--YIAPEIFLVATDE 180
IHRD+ NILL I DF +A + ++ + P ++APE
Sbjct: 189 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV-- 246
Query: 181 VLGYSYSVDWWSLGVTLFEILA------RGRPFDIHSNTSVKDVKAIIYSPVHYPT 230
Y++ D WS G+ L+E+ + G P D +K+ ++ SP H P
Sbjct: 247 ---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML-SPEHAPA 298
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 87/174 (50%), Gaps = 18/174 (10%)
Query: 41 ALKNVLREMEILTTLEHPFLVNLWFCF-----QDEEDLFMVSDLLLGGDLRYHITQDIK- 94
++K+ LRE++I+ L+H +V ++ Q +D+ +++L ++ ++ D+
Sbjct: 51 SVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLAN 110
Query: 95 -FYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHA-HITDFNIATV 152
+ L+ ++L L Y+ + +++HRD+KP N+ ++ E I DF +A +
Sbjct: 111 VLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170
Query: 153 LE-----ENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEIL 201
++ + L+ + TK Y +P + L + Y+ ++D W+ G E+L
Sbjct: 171 MDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNN----YTKAIDMWAAGCIFAEML 219
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 19/177 (10%)
Query: 38 ERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQ----- 91
E++AL + E++I++ L +H +VNL + ++++ GDL + +
Sbjct: 92 EKEAL---MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAD 148
Query: 92 -DIKFYSVGTRNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIA 150
D + D +H ++ ++ + +L +K+ IHRD+ N+LL A I DF +A
Sbjct: 149 LDKEDGRPLELRDLLH-FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 207
Query: 151 T-VLEENQLATSMSGTKP--YIAPEIFLVATDEVLGYSYSVDWWSLGVTLFEILARG 204
++ ++ + P ++APE Y+ D WS G+ L+EI + G
Sbjct: 208 RDIMNDSNYIVKGNARLPVKWMAPESIFDCV-----YTVQSDVWSYGILLWEIFSLG 259
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 33/236 (13%)
Query: 19 KKDTKQMYAMKYMHKS-QCIERDALKNVLREMEILTTL-EHPFLVNLWFCFQDEEDLFMV 76
K D A+K + S ER+AL + E+++L+ L H +VNL ++
Sbjct: 67 KSDAAMTVAVKMLKPSAHLTEREAL---MSELKVLSYLGNHMNIVNLLGACTIGGPTLVI 123
Query: 77 SDLLLGGDLRYHITQDIKFYSVGTRNDTIHL-------------YAFELGLALDYLKTKH 123
++ GDL + + + + I +++++ + +L +K+
Sbjct: 124 TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN 183
Query: 124 IIHRDIKPDNILLDEEGHAHITDFNIAT-VLEENQLATSMSGTKP--YIAPEIFLVATDE 180
IHRD+ NILL I DF +A + ++ + P ++APE
Sbjct: 184 CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCV-- 241
Query: 181 VLGYSYSVDWWSLGVTLFEILA------RGRPFDIHSNTSVKDVKAIIYSPVHYPT 230
Y++ D WS G+ L+E+ + G P D +K+ ++ SP H P
Sbjct: 242 ---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML-SPEHAPA 293
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 115 ALDYLKTKHIIHRDIKPDNILLD-EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEI 173
A+ + ++HRDIK +NIL+D G + DF +L++ + T GT+ Y PE
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE- 179
Query: 174 FLVATDEVLGYSYSVDWWSLGVTLFEILARGRPFD 208
+ G S +V WSLG+ L++++ PF+
Sbjct: 180 -WIRYHRYHGRSAAV--WSLGILLYDMVCGDIPFE 211
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 49/195 (25%)
Query: 43 KNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDI------KFY 96
K +LRE+ IL L H +V + D+ + D+ +L ++ +I K +
Sbjct: 97 KRILREIAILNRLNHDHVVKVL-------DIVIPKDVEKFDEL--YVVLEIADSDFKKLF 147
Query: 97 SVGTRNDTIHLYA--FELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVLE 154
+H+ + L + + Y+ + I+HRD+KP N L++++ + DF +A ++
Sbjct: 148 RTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207
Query: 155 --EN-----------------------QLATSMSG---TKPYIAPEIFLVATDEVLGYSY 186
EN L ++G T+ Y APE+ L+ + Y+
Sbjct: 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQEN----YTE 263
Query: 187 SVDWWSLGVTLFEIL 201
++D WS+G E+L
Sbjct: 264 AIDVWSIGCIFAELL 278
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 39 RDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSV 98
R + + V M + +L+H +V L L +V+ L G L H+ Q
Sbjct: 56 RQSFQAVTDHMLAIGSLDHAHIVRL-LGLCPGSSLQLVTQYLPLGSLLDHVRQ-----HR 109
Query: 99 GTRNDTIHL-YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL--EE 155
G + L + ++ + YL+ ++HR++ N+LL + DF +A +L ++
Sbjct: 110 GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169
Query: 156 NQLATSMSGTKPYIAPEIFLVATDEV-LG-YSYSVDWWSLGVTLFEILARG 204
QL S + T I +A + + G Y++ D WS GVT++E++ G
Sbjct: 170 KQLLYSEAKTP------IKWMALESIHFGKYTHQSDVWSYGVTVWELMTFG 214
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 124 IIHRDIKPDNILLD-EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
++HRDIK +NIL+D G + DF +L++ + T GT+ Y PE +
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE--WIRYHRYH 190
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD 208
G S +V WSLG+ L++++ PF+
Sbjct: 191 GRSAAV--WSLGILLYDMVCGDIPFE 214
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 124 IIHRDIKPDNILLD-EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
++HRDIK +NIL+D G + DF +L++ + T GT+ Y PE +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE--WIRYHRYH 187
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD 208
G S +V WSLG+ L++++ PF+
Sbjct: 188 GRSAAV--WSLGILLYDMVCGDIPFE 211
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 124 IIHRDIKPDNILLD-EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
++HRDIK +NIL+D G + DF +L++ + T GT+ Y PE +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE--WIRYHRYH 191
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD 208
G S +V WSLG+ L++++ PF+
Sbjct: 192 GRSAAV--WSLGILLYDMVCGDIPFE 215
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 124 IIHRDIKPDNILLD-EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
++HRDIK +NIL+D G + DF +L++ + T GT+ Y PE +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE--WIRYHRYH 191
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD 208
G S +V WSLG+ L++++ PF+
Sbjct: 192 GRSAAV--WSLGILLYDMVCGDIPFE 215
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 124 IIHRDIKPDNILLD-EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
++HRDIK +NIL+D G + DF +L++ + T GT+ Y PE +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE--WIRYHRYH 187
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD 208
G S +V WSLG+ L++++ PF+
Sbjct: 188 GRSAAV--WSLGILLYDMVCGDIPFE 211
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 124 IIHRDIKPDNILLD-EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
++HRDIK +NIL+D G + DF +L++ + T GT+ Y PE +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE--WIRYHRYH 234
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD 208
G S +V WSLG+ L++++ PF+
Sbjct: 235 GRSAAV--WSLGILLYDMVCGDIPFE 258
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 124 IIHRDIKPDNILLD-EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
++HRDIK +NIL+D G + DF +L++ + T GT+ Y PE +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE--WIRYHRYH 192
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD 208
G S +V WSLG+ L++++ PF+
Sbjct: 193 GRSAAV--WSLGILLYDMVCGDIPFE 216
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 124 IIHRDIKPDNILLD-EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
++HRDIK +NIL+D G + DF +L++ + T GT+ Y PE +
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE--WIRYHRYH 214
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD 208
G S +V WSLG+ L++++ PF+
Sbjct: 215 GRSAAV--WSLGILLYDMVCGDIPFE 238
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 124 IIHRDIKPDNILLD-EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
++HRDIK +NIL+D G + DF +L++ + T GT+ Y PE +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE--WIRYHRYH 192
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD 208
G S +V WSLG+ L++++ PF+
Sbjct: 193 GRSAAV--WSLGILLYDMVCGDIPFE 216
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 26/118 (22%)
Query: 101 RNDTIHLYAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAH----------------- 143
R D I A+++ ++++L + + H D+KP+NIL + +
Sbjct: 116 RLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD 175
Query: 144 --ITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVLGYSYSVDWWSLGVTLFE 199
+ DF AT +E+ +++ + Y APE+ L LG+S D WS+G L E
Sbjct: 176 IKVVDFGSATYDDEHH--STLVXXRHYRAPEVIL-----ALGWSQPCDVWSIGCILIE 226
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 39 RDALKNVLREMEILTTLEHPFLVNLWFCFQDEEDLFMVSDLLLGGDLRYHITQDIKFYSV 98
R + + V M + +L+H +V L L +V+ L G L H+ Q
Sbjct: 74 RQSFQAVTDHMLAIGSLDHAHIVRL-LGLCPGSSLQLVTQYLPLGSLLDHVRQ-----HR 127
Query: 99 GTRNDTIHL-YAFELGLALDYLKTKHIIHRDIKPDNILLDEEGHAHITDFNIATVL--EE 155
G + L + ++ + YL+ ++HR++ N+LL + DF +A +L ++
Sbjct: 128 GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 187
Query: 156 NQLATSMSGTKPYIAPEIFLVATDEV-LG-YSYSVDWWSLGVTLFEILARG 204
QL S + T I +A + + G Y++ D WS GVT++E++ G
Sbjct: 188 KQLLYSEAKTP------IKWMALESIHFGKYTHQSDVWSYGVTVWELMTFG 232
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 124 IIHRDIKPDNILLD-EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
++HRDIK +NIL+D G + DF +L++ + T GT+ Y PE +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE--WIRYHRYH 192
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD 208
G S +V WSLG+ L++++ PF+
Sbjct: 193 GRSAAV--WSLGILLYDMVCGDIPFE 216
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 124 IIHRDIKPDNILLD-EEGHAHITDFNIATVLEENQLATSMSGTKPYIAPEIFLVATDEVL 182
++HRDIK +NIL+D G + DF +L++ + T GT+ Y PE +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-VYTDFDGTRVYSPPE--WIRYHRYH 234
Query: 183 GYSYSVDWWSLGVTLFEILARGRPFD 208
G S +V WSLG+ L++++ PF+
Sbjct: 235 GRSAAV--WSLGILLYDMVCGDIPFE 258
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,376,063
Number of Sequences: 62578
Number of extensions: 300859
Number of successful extensions: 3198
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 672
Number of HSP's gapped (non-prelim): 1144
length of query: 246
length of database: 14,973,337
effective HSP length: 96
effective length of query: 150
effective length of database: 8,965,849
effective search space: 1344877350
effective search space used: 1344877350
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.9 bits)