Query psy7597
Match_columns 188
No_of_seqs 154 out of 769
Neff 3.9
Searched_HMMs 29240
Date Fri Aug 16 22:26:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7597.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7597hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gj4_A Glycogen phosphorylase, 100.0 2.1E-56 7.3E-61 433.8 9.4 173 1-180 88-279 (824)
2 1l5w_A Maltodextrin phosphoryl 100.0 5E-56 1.7E-60 430.0 7.7 173 1-180 78-266 (796)
3 1ygp_A Yeast glycogen phosphor 100.0 2.6E-55 8.8E-60 427.5 9.4 173 1-180 116-326 (879)
4 2c4m_A Glycogen phosphorylase; 100.0 3.7E-55 1.3E-59 424.0 10.0 174 1-180 79-256 (796)
5 1jg7_A BGT, DNA beta-glucosylt 63.9 2 6.7E-05 37.9 0.8 80 57-148 184-281 (351)
6 1q08_A Zn(II)-responsive regul 22.4 45 0.0015 22.9 2.0 17 12-28 10-26 (99)
7 4fxe_A Antitoxin RELB; toxin/a 22.4 55 0.0019 23.0 2.5 23 5-27 11-33 (79)
8 1g6u_A Domain swapped dimer; d 20.7 59 0.002 21.1 2.2 20 11-30 9-28 (48)
9 3nr7_A DNA-binding protein H-N 20.0 85 0.0029 22.6 3.2 24 6-29 60-83 (86)
10 1whz_A Hypothetical protein; a 18.8 88 0.003 20.5 2.9 19 8-26 51-69 (70)
No 1
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=2.1e-56 Score=433.80 Aligned_cols=173 Identities=35% Similarity=0.484 Sum_probs=155.1
Q ss_pred CCCCChhHHHHHHHHHcCCCHHHHHhhhhccCCCCCCchhhHHHHHHHhhccCCCceEEEeccCCceeEEEecCCccccc
Q psy7597 1 MTTLKRPHSRSASHQKLGLDIEELEAIEEDAGLGNGGLGRLAACFLDSMATLGLSAYGYECFMMVLIYTGRIKETLQPQE 80 (188)
Q Consensus 1 ~~~l~~~~~~~~~l~~lG~~l~~i~~~E~d~~LgnGGLGrLAa~~ldS~A~l~lp~~GygirY~~G~FkQ~i~dG~QvE~ 80 (188)
|.+|++.++|+++|+++|+|+++|+++|+||||||||||||||||||||||||+|++||||||+||||+|+|.||+|+|.
T Consensus 88 l~nlg~~~~~~~~l~~~g~~l~~i~~~E~d~~LgnGGLGrLAacfldS~AtL~~P~~G~Gi~Y~~G~F~Q~i~dG~Q~E~ 167 (824)
T 2gj4_A 88 MVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEE 167 (824)
T ss_dssp HHHHTCHHHHHHHHHHTTCCHHHHHTTSCCEEECCSHHHHHHHHHHHHHHHTTCCEEEEEECCSBCSCEEEEETTEEEEE
T ss_pred HHHCCCHHHHHHHHHHhCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeeEEeeCCEEEEc
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCcceEeeCceeEEEecccceee---------------eeeeeeecccccccccccccccCCccceeccCCCC
Q psy7597 81 ATLHQKVTVLFEIAGGRKTETVPALSGQRQ---------------KHETLAPFTGLAFYKANNFVSSKAPGIWQSSKTAP 145 (188)
Q Consensus 81 pd~Wl~~g~pWe~~r~~~~~~v~i~~g~v~---------------~~e~~~PIpG~~t~n~nN~v~~~tlRLW~a~~~~~ 145 (188)
||+|++.|||||++|++.++.|++ +|++. +..+++|||||.+. ++||||||+|+++.+
T Consensus 168 ~d~Wl~~~~pwe~~r~~~~~~V~f-~g~v~~~~~g~~w~~~~~v~av~yD~pi~Gy~~~------~vn~lRlW~a~~~~~ 240 (824)
T 2gj4_A 168 ADDWLRYGNPWEKARPEFTLPVHF-YGRVEHTSQGAKWVDTQVVLAMPYDTPVPGYRNN------VVNTMRLWSAKAPND 240 (824)
T ss_dssp CCCTTTTCCTTCEECGGGCEEEEE-SCEEEECSSSEEEESCEEEEEEEEEEEEECSSSS------CEEEEEEEEEECCC-
T ss_pred CccccccCCcccccCCCceEEEEe-CCEEEecCCCceecccceEEEeeccCCcCCCCCC------ceEEEEEEEeecCcc
Confidence 999999999999999999999987 55543 22556999999987 458899999999999
Q ss_pred CCchh----hHHHHhhchhhcccccceeccCcccccccc
Q psy7597 146 QNLLK----TYLKFESNTEHCMALGRVIGTSAALFKSRQ 180 (188)
Q Consensus 146 fnl~~----dy~~a~~~~~~ae~IsrVly~~~~~~~~~~ 180 (188)
|||.. +|..|+.+++.+|+||+||||+|+.++|+.
T Consensus 241 f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~ 279 (824)
T 2gj4_A 241 FNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKE 279 (824)
T ss_dssp ---------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCH
T ss_pred cchhhccCccHHHHHhcccchhhcCcCCCCCCCccchHh
Confidence 99886 999999999999999999999999888763
No 2
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=5e-56 Score=430.01 Aligned_cols=173 Identities=25% Similarity=0.354 Sum_probs=162.3
Q ss_pred CCCCChhHHHHHHHHHcCCCHHHHHhhhhccCCCCCCchhhHHHHHHHhhccCCCceEEEeccCCceeEEEecCCccccc
Q psy7597 1 MTTLKRPHSRSASHQKLGLDIEELEAIEEDAGLGNGGLGRLAACFLDSMATLGLSAYGYECFMMVLIYTGRIKETLQPQE 80 (188)
Q Consensus 1 ~~~l~~~~~~~~~l~~lG~~l~~i~~~E~d~~LgnGGLGrLAa~~ldS~A~l~lp~~GygirY~~G~FkQ~i~dG~QvE~ 80 (188)
|.+|++.++|+++|+++|+++++|+++|+||+|||||||||||||||||||||+|++||||||+||||+|+|.||+|+|.
T Consensus 78 l~nlg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F~Q~i~dG~Q~E~ 157 (796)
T 1l5w_A 78 LLNLGWYQDVQDSLKAYDINLTDLLEEEIDPALGNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVDGKQVEA 157 (796)
T ss_dssp HHHHTCHHHHHHHHHTTTCCHHHHHTTCCCCCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEE
T ss_pred HHhcCcHHHHHHHHHHcCCCHHHHHhcCCCcCcCCCcHHHHHHHHHHHHHhCCCCeEEEeeeecCCceeEEecCCeeEEe
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCcceEeeCceeEEEecccceee------------eeeeeeecccccccccccccccCCccceeccCCCCCCc
Q psy7597 81 ATLHQKVTVLFEIAGGRKTETVPALSGQRQ------------KHETLAPFTGLAFYKANNFVSSKAPGIWQSSKTAPQNL 148 (188)
Q Consensus 81 pd~Wl~~g~pWe~~r~~~~~~v~i~~g~v~------------~~e~~~PIpG~~t~n~nN~v~~~tlRLW~a~~~~~fnl 148 (188)
||+|++.|+|||+.|++.++.|++ +|+++ ++.+++|||||.+. ++||||||+|+++..|||
T Consensus 158 ~d~wl~~~~pwe~~r~~~~~~V~f-~g~~~~~~~w~~~~~v~av~yd~pi~Gy~~~------~~n~lrlW~a~~~~~f~l 230 (796)
T 1l5w_A 158 PDDWHRSNYPWFRHNEALDVQVGI-GGKVTKDGRWEPEFTITGQAWDLPVVGYRNG------VAQPLRLWQATHAHPFDL 230 (796)
T ss_dssp CCCCCGGGCTTCEECGGGCEEEEE-SCEECTTSCEECSEEEEEEEEEEEEECSSSC------CEEEEEEEEEECSSCCCH
T ss_pred cCccccCCCcceeecCCcEEEEee-CCEEeecceecCCceEEEEEecccccCCCCC------ceEEEEEEEeccCcccCh
Confidence 999999999999999999999999 66554 34667999999987 558899999999999998
Q ss_pred hh----hHHHHhhchhhcccccceeccCcccccccc
Q psy7597 149 LK----TYLKFESNTEHCMALGRVIGTSAALFKSRQ 180 (188)
Q Consensus 149 ~~----dy~~a~~~~~~ae~IsrVly~~~~~~~~~~ 180 (188)
.. ||.+|+++++.+++||+||||+|+.++|+.
T Consensus 231 ~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~ 266 (796)
T 1l5w_A 231 TKFNDGDFLRAEQQGINAEKLTKVLYPNDNAFEGKK 266 (796)
T ss_dssp HHHHTTCTTGGGHHHHHHHGGGTCSSCCCSSHHHHH
T ss_pred hhcCCccHhhhhhchHhHhhhhhcCcCCCCccchHH
Confidence 87 999999999999999999999999887763
No 3
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=2.6e-55 Score=427.51 Aligned_cols=173 Identities=27% Similarity=0.400 Sum_probs=155.8
Q ss_pred CCCCChhHHH-------------HHHHHHcCCCHHHHHhhhhccCCCCCCchhhHHHHHHHhhccCCCceEEEeccCCce
Q psy7597 1 MTTLKRPHSR-------------SASHQKLGLDIEELEAIEEDAGLGNGGLGRLAACFLDSMATLGLSAYGYECFMMVLI 67 (188)
Q Consensus 1 ~~~l~~~~~~-------------~~~l~~lG~~l~~i~~~E~d~~LgnGGLGrLAa~~ldS~A~l~lp~~GygirY~~G~ 67 (188)
|.+|++.+++ +++|+++|+|+++|+++|+||+|||||||||||||||||||||+|++||||||+|||
T Consensus 116 l~nlg~~~~~~~~~~~~~~~~~~~~al~~lg~~l~~~~~~E~da~LGnGGLGrLAacfLdS~AtLglP~~GyGlrY~~G~ 195 (879)
T 1ygp_A 116 LINMKIEDPEDPAASKGKPREMIKGALDELGFKLEDVLDQEPDAGLGNGGLGRLAACFVDSMATEGIPAWGYGLRYEYGI 195 (879)
T ss_dssp HHSCCC------------CHHHHHHHHHHHTCCHHHHHTTCCCBCSCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCS
T ss_pred HHhcCChhhhchhhccccchhHHHHHHHHcCCCHHHHHhcCCCCCcCCCcHHHHHHHHHHHHHhCCCCeEEEEeeecCCc
Confidence 3578999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEecCCccccccCCcccCCCcceEeeCceeEEEecccceee---------------------eeeeeeeccccccccc
Q psy7597 68 YTGRIKETLQPQEATLHQKVTVLFEIAGGRKTETVPALSGQRQ---------------------KHETLAPFTGLAFYKA 126 (188)
Q Consensus 68 FkQ~i~dG~QvE~pd~Wl~~g~pWe~~r~~~~~~v~i~~g~v~---------------------~~e~~~PIpG~~t~n~ 126 (188)
|+|+|.||+|+|.||+|+..|||||++|++.++.|++ +|++. ++.+++|||||.+.
T Consensus 196 F~Q~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f-~G~v~~~~~~~~G~~~~~w~~~~~v~av~yD~Pi~Gy~~~-- 272 (879)
T 1ygp_A 196 FAQKIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTF-YGYVDRPEGGKTTLSASQWIGGERVLAVAYDFPVPGFKTS-- 272 (879)
T ss_dssp CEEEEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEE-SCEEECC----CTTSCCEEECSEEEEEEEEEEEEECSSCC--
T ss_pred eEEEeeCCeeEEeccchhccCCcccccCCCceEEEee-CCEEeeccccCCCcceeEeeCCcEEEEEEccccccCcCCC--
Confidence 9999999999999999999999999999988888887 44333 23556999999987
Q ss_pred ccccccCCccceeccCCCCCCchh----hHHHHhhchhhcccccceeccCcccccccc
Q psy7597 127 NNFVSSKAPGIWQSSKTAPQNLLK----TYLKFESNTEHCMALGRVIGTSAALFKSRQ 180 (188)
Q Consensus 127 nN~v~~~tlRLW~a~~~~~fnl~~----dy~~a~~~~~~ae~IsrVly~~~~~~~~~~ 180 (188)
++||||||+|+++..|||.. ||.+|+++.+.+++||+||||+|+..+|+.
T Consensus 273 ----~~n~lRLW~a~~~~~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~Gke 326 (879)
T 1ygp_A 273 ----NVNNLRLWQARPTTEFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKE 326 (879)
T ss_dssp ----CEEEEEEEEEEESCSCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHH
T ss_pred ----ceEEEEEEEeccCcccchhhccCccHhHhhhChHhhhchhccCCCCCCCccchh
Confidence 45889999999999999887 999999999999999999999999887753
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=3.7e-55 Score=423.98 Aligned_cols=174 Identities=23% Similarity=0.336 Sum_probs=163.6
Q ss_pred CCCCChhHHHHHHHHHcCCCHHHHHhhhhccCCCCCCchhhHHHHHHHhhccCCCceEEEeccCCceeEEEecCCccccc
Q psy7597 1 MTTLKRPHSRSASHQKLGLDIEELEAIEEDAGLGNGGLGRLAACFLDSMATLGLSAYGYECFMMVLIYTGRIKETLQPQE 80 (188)
Q Consensus 1 ~~~l~~~~~~~~~l~~lG~~l~~i~~~E~d~~LgnGGLGrLAa~~ldS~A~l~lp~~GygirY~~G~FkQ~i~dG~QvE~ 80 (188)
|.+|++.++|+++|+++|+++++|+++|+||+|||||||||||||||||||||+|++||||||+||||+|+|.||+|+|.
T Consensus 79 l~nlg~~~~~~~~l~~~g~~l~~~~~~E~d~~LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~ 158 (796)
T 2c4m_A 79 LTNLGLVDEAAAATRELGHELTDILEIENDAALGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEK 158 (796)
T ss_dssp HHHTTCHHHHHHHHHHTTCCHHHHHTTCCCBCCCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEE
T ss_pred HHhcccHHHHHHHHHHcCCCHHHHHhhccccccCCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEee
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccCCCcceEeeCceeEEEecccceeeeeeeeeecccccccccccccccCCccceeccCCCCCCchh----hHHHHh
Q psy7597 81 ATLHQKVTVLFEIAGGRKTETVPALSGQRQKHETLAPFTGLAFYKANNFVSSKAPGIWQSSKTAPQNLLK----TYLKFE 156 (188)
Q Consensus 81 pd~Wl~~g~pWe~~r~~~~~~v~i~~g~v~~~e~~~PIpG~~t~n~nN~v~~~tlRLW~a~~~~~fnl~~----dy~~a~ 156 (188)
||+|++.|+|||+.|++.++.|++.+-.|.++.+.+|||||.+. ++||||||+|+++..|||.. ||.+|+
T Consensus 159 ~d~wl~~g~pwe~~r~~~~~~V~f~g~~v~a~~yd~pi~gy~~~------~~n~lrlW~a~~~~~f~l~~fn~gdy~~a~ 232 (796)
T 2c4m_A 159 PDPWREEEYPFTIRRASDQLVVCFDDMKTRAIPYDMPITGYGTH------NVGTLRLWKAEPWEEFDYDAFNAQRFTDAI 232 (796)
T ss_dssp CCCSSSSCCTTSEECGGGCEEEEETTEEEEEEEEEEEECCTTCC------CCEEEEEEEEEESSSSCHHHHHTTCHHHHH
T ss_pred CCccccCCCceeEecCCcEEEEEeCCEEEEEEEEeccccCcCCC------ceEEEEEEecccccccchhhccCcchhhhh
Confidence 99999999999999999999999955466677889999999987 56889999999999999766 999999
Q ss_pred hchhhcccccceeccCcccccccc
Q psy7597 157 SNTEHCMALGRVIGTSAALFKSRQ 180 (188)
Q Consensus 157 ~~~~~ae~IsrVly~~~~~~~~~~ 180 (188)
++.+.+++||+||||+|+.++|+.
T Consensus 233 ~~~~~~~~It~~LYp~D~~~~Gk~ 256 (796)
T 2c4m_A 233 IERERVSDICRVLYPNDTTYEGKK 256 (796)
T ss_dssp HHHHHHHHHHHSSSCCCSSHHHHH
T ss_pred hchHhhhchhhcCcCCCCCcchHH
Confidence 999999999999999999877753
No 5
>1jg7_A BGT, DNA beta-glucosyltransferase; glycosyltransferase; HET: DNA UDP; 1.65A {Enterobacteria phage T4} SCOP: c.87.1.1 PDB: 1bgu_A* 1bgt_A* 1ixy_A* 1c3j_A* 1jej_A* 1jg6_A* 1j39_A* 1jiu_A* 1jiv_A* 1jix_A* 1m5r_A* 1nvk_A* 1qkj_A* 1sxp_A* 1sxq_A* 2bgt_A 2bgu_A* 1nzd_A* 1nzf_A*
Probab=63.90 E-value=2 Score=37.88 Aligned_cols=80 Identities=15% Similarity=0.212 Sum_probs=49.6
Q ss_pred eEEEeccCCceeEEEec-----CCcccc-----ccCCcccCCCcceEeeCceeEEEecccceeeee--------eeeeec
Q psy7597 57 YGYECFMMVLIYTGRIK-----ETLQPQ-----EATLHQKVTVLFEIAGGRKTETVPALSGQRQKH--------ETLAPF 118 (188)
Q Consensus 57 ~GygirY~~G~FkQ~i~-----dG~QvE-----~pd~Wl~~g~pWe~~r~~~~~~v~i~~g~v~~~--------e~~~PI 118 (188)
+=||-.++.|-=.|+.+ -|--+| ..+.+..-..||..+ |+..|+++.. .+..-|
T Consensus 184 ~iyggsfrsg~re~kmve~lfdtgl~ieffg~~~~~qfknp~~pwt~~--------pvf~gki~~~~~~~~ns~a~a~~i 255 (351)
T 1jg7_A 184 VIYGGSFRSGQRESKMVEFLFDTGLNIEFFGNAREKQFKNPKYPWTKA--------PVFTGKIPMNMVSEKNSQAIAALI 255 (351)
T ss_dssp EEEECCCGGGTTHHHHHHHHSSCSSCEEEESSCCGGGCCCTTSCCSSC--------CEEEECCCGGGHHHHHTTEEEEEE
T ss_pred eeeccccccCchHHHHHHHHHhcCcceeeecchhHHhccCCCCCCcCC--------CccCCcCCHHHHhhccccceEEEE
Confidence 44666666665455442 344444 245566667999533 3444555442 445667
Q ss_pred ccccccccccccccCCccceeccCCCCCCc
Q psy7597 119 TGLAFYKANNFVSSKAPGIWQSSKTAPQNL 148 (188)
Q Consensus 119 pG~~t~n~nN~v~~~tlRLW~a~~~~~fnl 148 (188)
.|=.+|+ +|++ |+|+|.+-++..+-|
T Consensus 256 ~gdk~y~-~n~i---t~rvwe~~as~av~~ 281 (351)
T 1jg7_A 256 IGDKNYN-DNFI---TLRVWETMASDAVML 281 (351)
T ss_dssp CCCGGGT-TTCC---CHHHHHHHTSSSEEE
T ss_pred ecccccc-CCee---cHHHHHHHhhhhHhh
Confidence 9999996 5555 799999988876443
No 6
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=22.44 E-value=45 Score=22.94 Aligned_cols=17 Identities=18% Similarity=0.477 Sum_probs=14.5
Q ss_pred HHHHHcCCCHHHHHhhh
Q psy7597 12 ASHQKLGLDIEELEAIE 28 (188)
Q Consensus 12 ~~l~~lG~~l~~i~~~E 28 (188)
..|+++|++++||.++=
T Consensus 10 ~~lr~lGfsL~eIk~~l 26 (99)
T 1q08_A 10 RHARQLGFSLESIRELL 26 (99)
T ss_dssp HHHHHTTCCHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHH
Confidence 47899999999998764
No 7
>4fxe_A Antitoxin RELB; toxin/antitoxin system, toxin, nuclease, translational contr response, RELB, ribosome, toxin-toxin inhibitor compl; 2.75A {Escherichia coli} PDB: 2k29_A 2kc8_B
Probab=22.42 E-value=55 Score=23.04 Aligned_cols=23 Identities=17% Similarity=0.182 Sum_probs=19.2
Q ss_pred ChhHHHHHHHHHcCCCHHHHHhh
Q psy7597 5 KRPHSRSASHQKLGLDIEELEAI 27 (188)
Q Consensus 5 ~~~~~~~~~l~~lG~~l~~i~~~ 27 (188)
+.++++.+.|+++|+++.+.+..
T Consensus 11 ~lK~~a~~v~~~lGl~~s~Ai~~ 33 (79)
T 4fxe_A 11 ELKARSYAALEKMGVTPSEALRL 33 (79)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHH
Confidence 35788999999999999987753
No 8
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=20.74 E-value=59 Score=21.12 Aligned_cols=20 Identities=35% Similarity=0.471 Sum_probs=17.1
Q ss_pred HHHHHHcCCCHHHHHhhhhc
Q psy7597 11 SASHQKLGLDIEELEAIEED 30 (188)
Q Consensus 11 ~~~l~~lG~~l~~i~~~E~d 30 (188)
-++|+.-|++.+++...|.+
T Consensus 9 lqalkkegfspeelaalese 28 (48)
T 1g6u_A 9 LQALKKEGFSPEELAALESE 28 (48)
T ss_dssp HHHHHHTTCSHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHH
Confidence 36899999999999988864
No 9
>3nr7_A DNA-binding protein H-NS; dimer, oligomerisation, DNA condensation; 3.70A {Salmonella enterica subsp} PDB: 1lr1_A 1ni8_A
Probab=20.02 E-value=85 Score=22.60 Aligned_cols=24 Identities=17% Similarity=0.048 Sum_probs=19.5
Q ss_pred hhHHHHHHHHHcCCCHHHHHhhhh
Q psy7597 6 RPHSRSASHQKLGLDIEELEAIEE 29 (188)
Q Consensus 6 ~~~~~~~~l~~lG~~l~~i~~~E~ 29 (188)
+..++++.|.+-|+|++||.....
T Consensus 60 Kl~~~~e~l~~~GI~~eeL~~~~~ 83 (86)
T 3nr7_A 60 KLQQYREMLIADGIDPNELLNSMA 83 (86)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHhhhc
Confidence 456788899999999999986543
No 10
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=18.81 E-value=88 Score=20.54 Aligned_cols=19 Identities=21% Similarity=0.190 Sum_probs=16.3
Q ss_pred HHHHHHHHHcCCCHHHHHh
Q psy7597 8 HSRSASHQKLGLDIEELEA 26 (188)
Q Consensus 8 ~~~~~~l~~lG~~l~~i~~ 26 (188)
-.++..++++|++.+|+++
T Consensus 51 g~lk~Ilkqagl~~eef~~ 69 (70)
T 1whz_A 51 GTFKRILRDAGLTEEEFHN 69 (70)
T ss_dssp HHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHhh
Confidence 4688999999999998865
Done!