Query psy7599
Match_columns 161
No_of_seqs 131 out of 1083
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 22:28:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7599.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7599hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2v26_A Myosin VI; calmodulin-b 100.0 1.8E-36 6E-41 283.5 5.1 113 1-113 427-548 (784)
2 1lkx_A Myosin IE heavy chain; 100.0 1.9E-36 6.5E-41 280.4 4.9 112 1-112 360-481 (697)
3 1w7j_A Myosin VA; motor protei 100.0 9.8E-36 3.3E-40 278.8 5.1 111 1-112 411-531 (795)
4 4db1_A Myosin-7; S1DC, cardiac 100.0 1.5E-35 5.2E-40 277.1 6.0 110 1-111 435-555 (783)
5 4anj_A Unconventional myosin-V 100.0 1.4E-35 4.7E-40 284.1 5.7 113 1-113 431-552 (1052)
6 1w9i_A Myosin II heavy chain; 100.0 2.1E-35 7.2E-40 275.6 5.4 110 1-110 429-549 (770)
7 2dfs_A Myosin-5A; myosin-V, in 100.0 4.2E-35 1.4E-39 281.6 5.3 111 1-112 411-531 (1080)
8 1kk8_A Myosin heavy chain, str 100.0 5E-35 1.7E-39 275.2 4.5 99 11-110 454-553 (837)
9 2ycu_A Non muscle myosin 2C, a 100.0 1.1E-34 3.7E-39 276.8 5.8 103 10-112 426-531 (995)
10 1i84_S Smooth muscle myosin he 100.0 9E-35 3.1E-39 280.5 5.1 103 10-112 457-562 (1184)
11 1g8x_A Myosin II heavy chain f 100.0 2.6E-34 9E-39 274.5 5.9 111 1-111 429-550 (1010)
12 1y4m_A HERV-FRD_6P24.1 proviru 26.3 25 0.00085 22.1 1.2 27 71-97 25-51 (53)
13 1mof_A Moloney murine leukemia 22.2 30 0.001 21.9 1.0 27 71-97 27-53 (55)
No 1
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=100.00 E-value=1.8e-36 Score=283.49 Aligned_cols=113 Identities=29% Similarity=0.511 Sum_probs=105.6
Q ss_pred Cccccccccc---------ceeeeeecCcccCCCcCcchhhhhhhchhhhhhHHHHhhhhhhHHhhhhcCceeeecccCC
Q psy7599 1 MYLQLDIGIH---------RSLGVFKTSLVKHLKGSCFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSD 71 (161)
Q Consensus 1 ~~~~~~i~i~---------~~IGILDi~GFE~f~~NsfEQLcINyaNErLq~~f~~~if~~eqeeY~~EGI~w~~i~~~d 71 (161)
||.|++..|+ .+||||||||||+|..|||+|||||||||+||++|++++|+.+|++|.+|||.|.+|+|.|
T Consensus 427 LF~wlV~~IN~~l~~~~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~D 506 (784)
T 2v26_A 427 LFDHVVNRVNQCFPFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVD 506 (784)
T ss_dssp HHHHHHHHHHTTSCCSCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCC
T ss_pred HHHHHHHHHHHhcCcccccceeeecccCCcccCCcCCHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcCCCcccccccC
Confidence 4666655444 5799999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHhhcCCCccccccccccccCCCCChhHHHHHHhCCC
Q psy7599 72 NTLCLQLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPK 113 (161)
Q Consensus 72 N~~~ldLI~~kp~GLLsLLDEEc~~pk~tD~tfl~~l~~~~~ 113 (161)
|++|++||+++|+|||+|||++|++|++||.+|+.++.....
T Consensus 507 N~~~idLie~kp~GIlslLDEe~~~p~~tD~~f~~kl~~~~~ 548 (784)
T 2v26_A 507 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHK 548 (784)
T ss_dssp CHHHHHHHHCTTTSHHHHHHHHHHSSSCCHHHHHHHHHHHTT
T ss_pred hHHHHHHHhhccccHHHHHHHHhcCCCCChHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999987654
No 2
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=100.00 E-value=1.9e-36 Score=280.35 Aligned_cols=112 Identities=30% Similarity=0.467 Sum_probs=104.6
Q ss_pred Cccccccccc----------ceeeeeecCcccCCCcCcchhhhhhhchhhhhhHHHHhhhhhhHHhhhhcCceeeecccC
Q psy7599 1 MYLQLDIGIH----------RSLGVFKTSLVKHLKGSCFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS 70 (161)
Q Consensus 1 ~~~~~~i~i~----------~~IGILDi~GFE~f~~NsfEQLcINyaNErLq~~f~~~if~~eqeeY~~EGI~w~~i~~~ 70 (161)
||.|++..|+ .+||||||||||+|.+|||+|||||||||+||++|++++|+.+|++|.+|||.|.+|+|.
T Consensus 360 LF~wlV~~IN~~l~~~~~~~~~IGvLDI~GFE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~ 439 (697)
T 1lkx_A 360 LFNWLVSKINTIINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYF 439 (697)
T ss_dssp HHHHHHHHHHHHHCCCSCCCCEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCS
T ss_pred HHHHHHHHHHhhcCCCCCCceeEEeeccccccccCcCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCcccccCCC
Confidence 4666654443 689999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHhhcCCCccccccccccccCCCCChhHHHHHHhCC
Q psy7599 71 DNTLCLQLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKP 112 (161)
Q Consensus 71 dN~~~ldLI~~kp~GLLsLLDEEc~~pk~tD~tfl~~l~~~~ 112 (161)
||++|++||++||.|||+|||++|++|++||.+|+.|+....
T Consensus 440 dN~~~idLie~kp~GilslLDEec~~p~~tD~~f~~kl~~~~ 481 (697)
T 1lkx_A 440 NNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQF 481 (697)
T ss_dssp CCCHHHHHTTSSSSSHHHHHHHHHHSTTCCHHHHHHHHHHHS
T ss_pred CCHHHHHHHhcccCChhhhhHHhhCCCCCChHHHHHHHHHHh
Confidence 999999999999999999999999999999999999998743
No 3
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=100.00 E-value=9.8e-36 Score=278.79 Aligned_cols=111 Identities=37% Similarity=0.587 Sum_probs=103.7
Q ss_pred Cccccccccc----------ceeeeeecCcccCCCcCcchhhhhhhchhhhhhHHHHhhhhhhHHhhhhcCceeeecccC
Q psy7599 1 MYLQLDIGIH----------RSLGVFKTSLVKHLKGSCFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS 70 (161)
Q Consensus 1 ~~~~~~i~i~----------~~IGILDi~GFE~f~~NsfEQLcINyaNErLq~~f~~~if~~eqeeY~~EGI~w~~i~~~ 70 (161)
||.|++..|+ .+||||||||||+|..|||+|||||||||+||++|++++|+.+|++|.+|||.|.+|+|.
T Consensus 411 LF~wlV~~IN~~l~~~~~~~~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~ 490 (795)
T 1w7j_A 411 LFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFY 490 (795)
T ss_dssp HHHHHHHHHHHHHCCSSCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCC
T ss_pred HHHHHHHHHHHhhcCCccccceEEeeccCcccccCcCCHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCcccccCcc
Confidence 4667665554 589999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHhhcCCCccccccccccccCCCCChhHHHHHHhCC
Q psy7599 71 DNTLCLQLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKP 112 (161)
Q Consensus 71 dN~~~ldLI~~kp~GLLsLLDEEc~~pk~tD~tfl~~l~~~~ 112 (161)
||++||+||++| .|||+|||++|++|++||.+|+.|+..+.
T Consensus 491 DN~~~idLie~~-~GIlslLDEec~~p~~tD~~f~~kl~~~~ 531 (795)
T 1w7j_A 491 DNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTH 531 (795)
T ss_dssp CCHHHHHHHHST-TSHHHHHHHHHTSTTCCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhc-CCHHHhhhhhccCCCCChHHHHHHHHHHh
Confidence 999999999987 99999999999999999999999998653
No 4
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=100.00 E-value=1.5e-35 Score=277.09 Aligned_cols=110 Identities=35% Similarity=0.664 Sum_probs=101.1
Q ss_pred Cccccccccc----------ceeeeeecCcccCCCcCcchhhhhhhchhhhhhHHHHhhhhhhHHhhhhcCceeeeccc-
Q psy7599 1 MYLQLDIGIH----------RSLGVFKTSLVKHLKGSCFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF- 69 (161)
Q Consensus 1 ~~~~~~i~i~----------~~IGILDi~GFE~f~~NsfEQLcINyaNErLq~~f~~~if~~eqeeY~~EGI~w~~i~~- 69 (161)
||.|++..|+ .+||||||||||+|..|||+|||||||||+||++|++++|+.+|++|.+|||.|..|+|
T Consensus 435 LF~wlV~~IN~~l~~~~~~~~~IGvLDI~GFE~f~~NsFEQlCINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~ 514 (783)
T 4db1_A 435 MFNWMVTRINATLETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFG 514 (783)
T ss_dssp HHHHHHHHHHHHHCCSCCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCGG
T ss_pred HHHHHHHHHHHhcCCCCCCCceEEEeccccccccccCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCCccccccc
Confidence 4666665554 58999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHhhcCCCccccccccccccCCCCChhHHHHHHhC
Q psy7599 70 SDNTLCLQLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIK 111 (161)
Q Consensus 70 ~dN~~~ldLI~~kp~GLLsLLDEEc~~pk~tD~tfl~~l~~~ 111 (161)
.||++|++||++ |+|||+||||+|++|++||.+|+.||..+
T Consensus 515 ~Dn~~~idLiek-p~Gil~lLDEec~~p~~tD~tf~~kl~~~ 555 (783)
T 4db1_A 515 MDLQACIDLIEK-PMGIMSILEEECMFPKATDMTFKAKLFDN 555 (783)
T ss_dssp GGGHHHHHHHHS-TTSHHHHHCC-TTCTTCCHHHHHHHHHHH
T ss_pred CChHHHHHHHhC-CCchHhhhhHHhcCCCCCHHHHHHHHHHH
Confidence 599999999995 89999999999999999999999999754
No 5
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=100.00 E-value=1.4e-35 Score=284.07 Aligned_cols=113 Identities=29% Similarity=0.511 Sum_probs=106.1
Q ss_pred Cccccccccc---------ceeeeeecCcccCCCcCcchhhhhhhchhhhhhHHHHhhhhhhHHhhhhcCceeeecccCC
Q psy7599 1 MYLQLDIGIH---------RSLGVFKTSLVKHLKGSCFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSD 71 (161)
Q Consensus 1 ~~~~~~i~i~---------~~IGILDi~GFE~f~~NsfEQLcINyaNErLq~~f~~~if~~eqeeY~~EGI~w~~i~~~d 71 (161)
||.|++..|+ .+||||||||||+|..|||+|||||||||+||++|++++|+.+|++|.+|||.|..|+|.|
T Consensus 431 LF~wiV~~IN~~l~~~~~~~~IGILDI~GFE~f~~NsFEQLCINyaNEkLQq~Fn~~vF~~EqeeY~~EgI~w~~I~f~D 510 (1052)
T 4anj_A 431 LFDHVVNRVNQCFPFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVD 510 (1052)
T ss_dssp HHHHHHHHHHTTSCCSCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCC
T ss_pred HHHHHHHhhhcccccccccceEEEEecCCCcccccCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCcccCCcCC
Confidence 4566655554 5799999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHhhcCCCccccccccccccCCCCChhHHHHHHhCCC
Q psy7599 72 NTLCLQLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPK 113 (161)
Q Consensus 72 N~~~ldLI~~kp~GLLsLLDEEc~~pk~tD~tfl~~l~~~~~ 113 (161)
|++||+||+++|.|||+|||++|++|++||.+|+.++..+..
T Consensus 511 N~~~idLie~kp~GIl~lLDEe~~~p~~tD~~f~~kl~~~~~ 552 (1052)
T 4anj_A 511 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHK 552 (1052)
T ss_dssp CHHHHHHHHCTTTSHHHHHHHHHHSSSCCHHHHHHHHHHTTT
T ss_pred cHHHHHHHHcCcccHHHHHHHHhcCCCCcHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999988764
No 6
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=100.00 E-value=2.1e-35 Score=275.64 Aligned_cols=110 Identities=38% Similarity=0.659 Sum_probs=102.1
Q ss_pred Cccccccccc---------ceeeeeecCcccCCCcCcchhhhhhhchhhhhhHHHHhhhhhhHHhhhhcCceeeeccc-C
Q psy7599 1 MYLQLDIGIH---------RSLGVFKTSLVKHLKGSCFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-S 70 (161)
Q Consensus 1 ~~~~~~i~i~---------~~IGILDi~GFE~f~~NsfEQLcINyaNErLq~~f~~~if~~eqeeY~~EGI~w~~i~~-~ 70 (161)
||.|++..|+ .+||||||||||+|..|||+|||||||||+||++|++++|+.+|++|.+|||.|.+|+| .
T Consensus 429 LF~wlV~~IN~~l~~~~~~~~IGvLDI~GFE~F~~NsFEQlCINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~ 508 (770)
T 1w9i_A 429 LFLWLVKKINNVLCQERKAYFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGL 508 (770)
T ss_dssp HHHHHHHHHHHHHCCSCCSEEEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGG
T ss_pred HHHHHHHHHHHHhcCCCCCCeeeeccCccccccccCCHHHHHHHhhHHHHHHHHHhhhhHHHHHHhhccCCCceeecccc
Confidence 4666655443 58999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CcHHHHHHhhcC-CCccccccccccccCCCCChhHHHHHHh
Q psy7599 71 DNTLCLQLVEGK-PNGLLCVLDDQANWSRGNPMVSCVFWMI 110 (161)
Q Consensus 71 dN~~~ldLI~~k-p~GLLsLLDEEc~~pk~tD~tfl~~l~~ 110 (161)
||++|++||+++ |+|||+|||++|++|++||.+|+.+|+.
T Consensus 509 dn~~~idLiek~~p~GilslLDEec~~p~~tD~~f~~kL~~ 549 (770)
T 1w9i_A 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHS 549 (770)
T ss_dssp GGHHHHHHHHCTTTTCHHHHHHHHHSSSSCCHHHHHHHHHH
T ss_pred CcHHHHHHHhCCCCCchhhhhhhhhCCCCCChHHHHHHHHH
Confidence 999999999984 9999999999999999999999999764
No 7
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=100.00 E-value=4.2e-35 Score=281.56 Aligned_cols=111 Identities=37% Similarity=0.587 Sum_probs=103.7
Q ss_pred Cccccccccc----------ceeeeeecCcccCCCcCcchhhhhhhchhhhhhHHHHhhhhhhHHhhhhcCceeeecccC
Q psy7599 1 MYLQLDIGIH----------RSLGVFKTSLVKHLKGSCFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS 70 (161)
Q Consensus 1 ~~~~~~i~i~----------~~IGILDi~GFE~f~~NsfEQLcINyaNErLq~~f~~~if~~eqeeY~~EGI~w~~i~~~ 70 (161)
||.|++..|+ .+||||||||||+|..|||+|||||||||+||++|++++|+.+|++|.+|||.|.+|+|.
T Consensus 411 LF~wlV~~iN~~l~~~~~~~~~IgvLDI~GFE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~ 490 (1080)
T 2dfs_A 411 LFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFY 490 (1080)
T ss_dssp HHHHHHHHHHHHHCCSSCCCEEEEEEEECCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCCCCC
T ss_pred HHHHHHHHHHHhhccccccCceEEeeccCCccccCcCCHHHHHHHhhhHHHHHHHHHHhhHHHHHHHhhcCCcccccccc
Confidence 4667665554 589999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHhhcCCCccccccccccccCCCCChhHHHHHHhCC
Q psy7599 71 DNTLCLQLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKP 112 (161)
Q Consensus 71 dN~~~ldLI~~kp~GLLsLLDEEc~~pk~tD~tfl~~l~~~~ 112 (161)
||++||+||++| .|||+|||++|++|++||.+|+.++....
T Consensus 491 dn~~~idlie~~-~Gil~lLdee~~~p~~tD~~f~~kl~~~~ 531 (1080)
T 2dfs_A 491 DNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTH 531 (1080)
T ss_dssp CCHHHHHHHHST-TSHHHHHHHHTTSTTCCHHHHHHHHHHHH
T ss_pred ccHHHHHHHhcC-CceeeeccccccCCCCChHHHHHHHHHHh
Confidence 999999999986 99999999999999999999999998653
No 8
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=100.00 E-value=5e-35 Score=275.21 Aligned_cols=99 Identities=38% Similarity=0.712 Sum_probs=95.7
Q ss_pred ceeeeeecCcccCCCcCcchhhhhhhchhhhhhHHHHhhhhhhHHhhhhcCceeeeccc-CCcHHHHHHhhcCCCccccc
Q psy7599 11 RSLGVFKTSLVKHLKGSCFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCV 89 (161)
Q Consensus 11 ~~IGILDi~GFE~f~~NsfEQLcINyaNErLq~~f~~~if~~eqeeY~~EGI~w~~i~~-~dN~~~ldLI~~kp~GLLsL 89 (161)
.+||||||||||+|..|||+|||||||||+||++|++++|+.+|++|.+|||.|.+|+| .||++||+||++ |.|||+|
T Consensus 454 ~~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek-p~GIlsl 532 (837)
T 1kk8_A 454 YYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSI 532 (837)
T ss_dssp EEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCCCCHHHHHHHHHHHS-TTSHHHH
T ss_pred ceEEEEecCCccccccccHHHHHHHHhhHHHHHHHHHhhhHHHHHHhhhcCCceeecccccCHHHHHHHHhc-CCcHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999 599999999996 8999999
Q ss_pred cccccccCCCCChhHHHHHHh
Q psy7599 90 LDDQANWSRGNPMVSCVFWMI 110 (161)
Q Consensus 90 LDEEc~~pk~tD~tfl~~l~~ 110 (161)
|||+|++|++||.+|+.||+.
T Consensus 533 LDEec~~p~~tD~tf~~kl~~ 553 (837)
T 1kk8_A 533 LEEECMFPKADDKSFQDKLYQ 553 (837)
T ss_dssp HHHHTTCTTCCHHHHHHHHHH
T ss_pred HHHHhcCCCCChHHHHHHHHH
Confidence 999999999999999999753
No 9
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=100.00 E-value=1.1e-34 Score=276.85 Aligned_cols=103 Identities=36% Similarity=0.641 Sum_probs=98.3
Q ss_pred cceeeeeecCcccCCCcCcchhhhhhhchhhhhhHHHHhhhhhhHHhhhhcCceeeeccc-CCcHHHHHHhhc--CCCcc
Q psy7599 10 HRSLGVFKTSLVKHLKGSCFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEG--KPNGL 86 (161)
Q Consensus 10 ~~~IGILDi~GFE~f~~NsfEQLcINyaNErLq~~f~~~if~~eqeeY~~EGI~w~~i~~-~dN~~~ldLI~~--kp~GL 86 (161)
..+||||||||||+|..|||+|||||||||+||++|++++|+.+|++|.+|||.|.+|+| .||++||+||++ +|.||
T Consensus 426 ~~~IgvLDI~GFE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~p~Gi 505 (995)
T 2ycu_A 426 ASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGL 505 (995)
T ss_dssp SEEEEEEECCCBCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHHHHHHCCSSSCCH
T ss_pred cceEEEeccccccccccchHHHHHHHhhHHHHHHHHHHhhhHHHHHHHhccCCCccccccccChHHHHHHHhccCCCCch
Confidence 468999999999999999999999999999999999999999999999999999999999 699999999998 49999
Q ss_pred ccccccccccCCCCChhHHHHHHhCC
Q psy7599 87 LCVLDDQANWSRGNPMVSCVFWMIKP 112 (161)
Q Consensus 87 LsLLDEEc~~pk~tD~tfl~~l~~~~ 112 (161)
|+|||++|++|++||.+|+.||+.+.
T Consensus 506 l~lLdee~~~p~~tD~~f~~kl~~~~ 531 (995)
T 2ycu_A 506 LALLDEECWFPKATDKSFVEKVAQEQ 531 (995)
T ss_dssp HHHHHHSSSSTTCCHHHHHHHHHHHH
T ss_pred hhhhHHHhcCCCCchHHHHHHHHHhc
Confidence 99999999999999999999987643
No 10
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=100.00 E-value=9e-35 Score=280.53 Aligned_cols=103 Identities=36% Similarity=0.658 Sum_probs=97.4
Q ss_pred cceeeeeecCcccCCCcCcchhhhhhhchhhhhhHHHHhhhhhhHHhhhhcCceeeeccc-CCcHHHHHHhhcC--CCcc
Q psy7599 10 HRSLGVFKTSLVKHLKGSCFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGK--PNGL 86 (161)
Q Consensus 10 ~~~IGILDi~GFE~f~~NsfEQLcINyaNErLq~~f~~~if~~eqeeY~~EGI~w~~i~~-~dN~~~ldLI~~k--p~GL 86 (161)
..+||||||||||+|..|||+|||||||||+||++|++++|+.+|++|.+|||.|.+|+| .||++||+||++| |+||
T Consensus 457 ~~~IgvLDi~GFE~f~~NsfeQlciNy~nEkLq~~f~~~~f~~eq~ey~~Egi~~~~i~~~~dn~~~~~lie~~~~~~Gi 536 (1184)
T 1i84_S 457 ASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGV 536 (1184)
T ss_dssp CEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCSCCCCCCCCCCHHHHHTTSCCSSSCCH
T ss_pred cceEEEeecCCcCCCCcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCccccccCCCcHHHHHHHhCCCCCCCc
Confidence 368999999999999999999999999999999999999999999999999999999999 5999999999963 3499
Q ss_pred ccccccccccCCCCChhHHHHHHhCC
Q psy7599 87 LCVLDDQANWSRGNPMVSCVFWMIKP 112 (161)
Q Consensus 87 LsLLDEEc~~pk~tD~tfl~~l~~~~ 112 (161)
|+|||++|++|++||.+|+.++....
T Consensus 537 l~lLdee~~~p~~td~~~~~kl~~~~ 562 (1184)
T 1i84_S 537 LALLDEECWFPKATDTSFVEKLIQEQ 562 (1184)
T ss_dssp HHHHHHTTSCTTCCHHHHHHHHHHHT
T ss_pred hhhhhhhhCCCCCChHHHHHHHHHHh
Confidence 99999999999999999999998654
No 11
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=100.00 E-value=2.6e-34 Score=274.54 Aligned_cols=111 Identities=39% Similarity=0.660 Sum_probs=102.7
Q ss_pred Cccccccccc---------ceeeeeecCcccCCCcCcchhhhhhhchhhhhhHHHHhhhhhhHHhhhhcCceeeeccc-C
Q psy7599 1 MYLQLDIGIH---------RSLGVFKTSLVKHLKGSCFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-S 70 (161)
Q Consensus 1 ~~~~~~i~i~---------~~IGILDi~GFE~f~~NsfEQLcINyaNErLq~~f~~~if~~eqeeY~~EGI~w~~i~~-~ 70 (161)
||.|++..|+ .+||||||||||+|..|||+|||||||||+||++|++++|+.+|++|.+|||.|.+|+| .
T Consensus 429 LF~wlV~~IN~~l~~~~~~~~IgvLDI~GFE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~ 508 (1010)
T 1g8x_A 429 LFLWLVKKINNVLCSERKAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGL 508 (1010)
T ss_dssp HHHHHHHHHHHHHCCSSCSEEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCC
T ss_pred HHHHHHHHHHHHhcCCCcCceeeeccCcccccCCcCcHHHHHHHhhhHHHHHHHHHHhhHHHHHHhhccCCCcccccccc
Confidence 4666665543 58999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CcHHHHHHhhc-CCCccccccccccccCCCCChhHHHHHHhC
Q psy7599 71 DNTLCLQLVEG-KPNGLLCVLDDQANWSRGNPMVSCVFWMIK 111 (161)
Q Consensus 71 dN~~~ldLI~~-kp~GLLsLLDEEc~~pk~tD~tfl~~l~~~ 111 (161)
||++||+||++ +|.|||+|||++|++|++||.+|+.|+...
T Consensus 509 dn~~~idlie~~~~~Gil~lLdee~~~p~~td~~f~~kl~~~ 550 (1010)
T 1g8x_A 509 DSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSH 550 (1010)
T ss_dssp CSHHHHHHHHCTTTTCHHHHHHHHTTSSSCCHHHHHHHHHHH
T ss_pred ChHHHHHHHhcCCCCeeehhhhHHhCCCCCChHHHHHHHHHH
Confidence 99999999998 499999999999999999999999997754
No 12
>1y4m_A HERV-FRD_6P24.1 provirus ancestral ENV polyprotei; coat protein, membrane fusion, endogenous retrovirus, membra protein; 1.60A {Homo sapiens} SCOP: h.3.2.1
Probab=26.26 E-value=25 Score=22.10 Aligned_cols=27 Identities=19% Similarity=0.352 Sum_probs=23.7
Q ss_pred CcHHHHHHhhcCCCccccccccccccC
Q psy7599 71 DNTLCLQLVEGKPNGLLCVLDDQANWS 97 (161)
Q Consensus 71 dN~~~ldLI~~kp~GLLsLLDEEc~~p 97 (161)
.|+..+|++..+..|+=..|.++|.+.
T Consensus 25 QNRraLDlL~a~~GG~C~~l~e~CC~y 51 (53)
T 1y4m_A 25 QNRRGLDMLTAAQGGICLALDEKCCFW 51 (53)
T ss_dssp HHHHHHHHHTGGGTSHHHHTTSCCCCC
T ss_pred HHHHHHHHHHHHhCCccHHhcCchhcc
Confidence 578899999998899999999999874
No 13
>1mof_A Moloney murine leukemia virus P15; glycoprotein, coat protein, polyprotein, transmembrane, SIGN protein; 1.70A {Moloney murine leukemia virus} SCOP: h.3.2.1
Probab=22.23 E-value=30 Score=21.88 Aligned_cols=27 Identities=26% Similarity=0.326 Sum_probs=23.6
Q ss_pred CcHHHHHHhhcCCCccccccccccccC
Q psy7599 71 DNTLCLQLVEGKPNGLLCVLDDQANWS 97 (161)
Q Consensus 71 dN~~~ldLI~~kp~GLLsLLDEEc~~p 97 (161)
-|+..+|++..+..|+=..|.++|.+.
T Consensus 27 QNRraLD~L~a~~GG~C~~l~e~CCfy 53 (55)
T 1mof_A 27 QNRRGLDLLFLKEGGLCAALKEECAFY 53 (55)
T ss_dssp HHHHHHHHHTGGGTCHHHHHTSCCCCC
T ss_pred HHHHHHHHHHHHhCCccHHHcCchhcc
Confidence 578899999998899999999999874
Done!