BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy760
(511 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3FIM|B Chain B, Crystal Structure Of Aryl-Alcohol-Oxidase From Pleurotus
Eryingii
Length = 566
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 169/338 (50%), Gaps = 44/338 (13%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLV--DIPVLNTNLIL-SPLNW 125
++D+++VGAG G VA RL+E P +L+LEAG ++ + P+L L+ S +W
Sbjct: 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDW 61
Query: 126 GYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGWS 184
Y T A G G+ +P G+ +GG+S ++ M+ RG+ ++D +A + G+ GW+
Sbjct: 62 NYTTT-----AQAGYNGRSIAYPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWN 116
Query: 185 YNEVLPYFKKAERI-QISELQNSS------YHGTQGFIGVDYTEYNTPMLDA-------- 229
++ + + +K E + ++ N+S HGT G + + + TP+ D
Sbjct: 117 WDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPGFPTPLDDRVLATTQEQ 176
Query: 230 ----FLQAGMEAGYPLVDYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKD 285
F M G+PL G + + A++ R SS+ Y+ P + R NL+V
Sbjct: 177 SEEFFFNPDMGTGHPL---------GISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLI 227
Query: 286 SSFVKKILIDPVTKK----ACGVLATIKGIDHK-ILARKEVILSAGAFNSPKLLMLSGIG 340
++ V K++ T C A +G + A+KEV+LSAG+ +P LL LSGIG
Sbjct: 228 NAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIG 287
Query: 341 PQEHLNDLNI-PVIKNLRVGENLQEHLAMAGLTFLVNQ 377
+ L+ + I ++ N VG NL +HL + F VN
Sbjct: 288 DENDLSSVGIDTIVNNPSVGRNLSDHLLLPA-AFFVNS 324
>pdb|3Q9T|A Chain A, Crystal Structure Analysis Of Formate Oxidase
pdb|3Q9T|B Chain B, Crystal Structure Analysis Of Formate Oxidase
pdb|3Q9T|C Chain C, Crystal Structure Analysis Of Formate Oxidase
Length = 577
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 168/341 (49%), Gaps = 35/341 (10%)
Query: 70 YDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNT-----NLILSPLN 124
+DF+IVG G G TVA RL+E P+ +L++EAG DIP + T +L S +
Sbjct: 7 FDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAG--IGNPEDIPEITTPSSAMDLRNSKYD 64
Query: 125 WGYKT---EKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNY 181
W YKT ++D P GK +GG+S +N + G+K +D W + G
Sbjct: 65 WAYKTTMVRRDDYERI------EKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGK 118
Query: 182 GWSYNEVLPYFKKA------ERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGM 235
W+++ ++PY +K+ R+ EL+ G + + P + +A
Sbjct: 119 EWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISHAELIDEMAPFRENLTKAWK 178
Query: 236 EAGYPLVD--YNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKIL 293
G PL++ Y+G+ G T++ R +RS + ++ K + N+T+ K+++
Sbjct: 179 SMGQPLIENIYDGEMD-GLTHCCDTIY-RGQRSGSFLFV---KNKPNITIVPEVHSKRLI 233
Query: 294 IDPVTKKACGV-LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPV 352
I+ + GV + T G + A +EVILS G F +PKLLMLSGIGP L+ I
Sbjct: 234 INEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINT 293
Query: 353 IKNLR-VGENLQEHLAMAGLTFLVNQPIGL-LQDRLIKEMP 391
I + R VG+NL +H G+ F++ G + D L++ P
Sbjct: 294 IVDSRHVGQNLMDH---PGVPFVLRVKDGFGMDDVLLRHGP 331
>pdb|1CF3|A Chain A, Glucose Oxidase From Apergillus Niger
pdb|1GAL|A Chain A, Crystal Structure Of Glucose Oxidase From Aspergillus
Niger: Refined At 2.3 Angstroms Resolution
pdb|3QVP|A Chain A, Crystal Structure Of Glucose Oxidase For Space Group C2221
At 1.2 A Resolution
pdb|3QVR|A Chain A, Crystal Structure Of Glucose Oxidase For Space Group P3121
At 1.3 A Resolution
Length = 583
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 161/319 (50%), Gaps = 34/319 (10%)
Query: 71 DFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHY-FNYLVDIPVLNT--NLILSPLNWGY 127
D+II G G G T A RL+E P+ +L++E+G Y + I LN ++ S ++ Y
Sbjct: 21 DYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAY 80
Query: 128 KTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGWSYN 186
+T + L Q SG G+GG++L+N +TR +K D W + GN GW+++
Sbjct: 81 ETVE------LATNNQTALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWD 134
Query: 187 EVLPYFKKAER--------IQISELQNSSYHGTQGFI-------GVDYTEYNTPMLDAFL 231
V Y +AER I N+S HG G + G DY+ P++ A +
Sbjct: 135 NVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGPRDTGDDYS----PIVKALM 190
Query: 232 QAGMEAGYPLV-DYNGKTQTGFARAQATLHKRSRRS-SAKDYIDPIKKRCNLTVKDSSFV 289
A + G P D+ G + TLH+ RS +A++++ P +R NL V +V
Sbjct: 191 SAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYV 250
Query: 290 KKILI--DPVTKKACGV-LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLN 346
K+L+ + T +A GV T KG H + A+ EV+L+AG+ SP +L SGIG + L
Sbjct: 251 GKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILE 310
Query: 347 DLNIPVIKNLRVGENLQEH 365
L I + +L VG NLQ+
Sbjct: 311 PLGIDTVVDLPVGLNLQDQ 329
>pdb|3T37|A Chain A, Crystal Structure Of Pyridoxine 4-Oxidase From Mesorbium
Loti
Length = 526
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 157/316 (49%), Gaps = 19/316 (6%)
Query: 71 DFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDI--PVLNTNLILSPLNWGYK 128
D +IVG G G +A RLSE P ++LL+EAG DI P L +W Y+
Sbjct: 19 DIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPTD-PDIWNPAAWPALQGRSYDWDYR 77
Query: 129 TEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGWSYNE 187
TE + G G+ W G+ +GG+S ++ M Y RG+ ++ W G+ W ++E
Sbjct: 78 TEAQ-----AGTAGRAHHWARGRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDE 132
Query: 188 VLPYFKKAERIQISELQNSSYHGTQGFIGVDY-TEYNTPMLDAFLQAGMEAGYPLVD-YN 245
+LP F+ I+ L HG G + + + +P+ AF++AG G P ++ +N
Sbjct: 133 LLPVFQA---IEDHPLGGDGIHGKGGPLPIHLPADEVSPLARAFIEAGASLGLPRLEGHN 189
Query: 246 GKTQTGFARAQATLHKRSRRSSAKDYI-DPIKKRCNLTVKDSSFVKKILIDPVTKKACGV 304
G + R ++A ++ ++ R NLT+ S V+++ ++ ++ V
Sbjct: 190 SGEMIGVTPNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEGNQVRSLEV 249
Query: 305 LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL-RVGENLQ 363
+ + ++ A +++L AGA SP LLM SGIGP + L+ + + ++ +G NLQ
Sbjct: 250 VG--RQGSAEVFA-DQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQ 306
Query: 364 EHLAMAGLTFLVNQPI 379
+HL AG + +P+
Sbjct: 307 DHLLGAGNLYAARKPV 322
>pdb|2JBV|A Chain A, Crystal Structure Of Choline Oxidase Reveals Insights Into
The Catalytic Mechanism
pdb|2JBV|B Chain B, Crystal Structure Of Choline Oxidase Reveals Insights Into
The Catalytic Mechanism
Length = 546
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 160/320 (50%), Gaps = 18/320 (5%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLN--TNLILSPLNWG 126
E+D+I+VG G G VA RLSE P + L+EAG + ++ L+ L+ S +W
Sbjct: 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWD 72
Query: 127 YKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDW-AKLGNYGWSY 185
Y E ++ ++ R K +GG S N+ + + + D+W AK G GW+
Sbjct: 73 YPIEPQENGNSF-MRHARA-----KVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNA 126
Query: 186 NEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVDYN 245
P +K+ E + + ++ +HG G + + P A L A +AG P +N
Sbjct: 127 EAAWPLYKRLETNEDAG-PDAPHHGDSGPVHLMNVPPKDPTGVALLDACEQAGIPRAKFN 185
Query: 246 GKTQTGFARAQATLHKR---SRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKAC 302
T +++R +R SS+ YI PI ++ N T+ ++++ D ++
Sbjct: 186 TGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFD-ADRRCT 244
Query: 303 GV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPV-IKNLRVG 359
GV + + G H++ AR EV+LS GA ++PKLLMLSGIGP HL + I V + + VG
Sbjct: 245 GVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVG 304
Query: 360 ENLQEHLAMAGLTFLVNQPI 379
E+LQ+H + F QP+
Sbjct: 305 EHLQDH-PEGVVQFEAKQPM 323
>pdb|3LJP|A Chain A, Crystal Structure Of Choline Oxidase V464a Mutant
pdb|3LJP|B Chain B, Crystal Structure Of Choline Oxidase V464a Mutant
Length = 546
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 160/320 (50%), Gaps = 18/320 (5%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLN--TNLILSPLNWG 126
E+D+I+VG G G VA RLSE P + L+EAG + ++ L+ L+ S +W
Sbjct: 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWD 72
Query: 127 YKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDW-AKLGNYGWSY 185
Y E ++ ++ R K +GG S N+ + + + D+W AK G GW+
Sbjct: 73 YPIEPQENGNSF-MRHARA-----KVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNA 126
Query: 186 NEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVDYN 245
P +K+ E + + ++ +HG G + + P A L A +AG P +N
Sbjct: 127 EAAWPLYKRLETNEDAG-PDAPHHGDSGPVHLMNVPPKDPTGVALLDACEQAGIPRAKFN 185
Query: 246 GKTQTGFARAQATLHKR---SRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKAC 302
T +++R +R SS+ YI PI ++ N T+ ++++ D ++
Sbjct: 186 TGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFD-ADRRCT 244
Query: 303 GV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPV-IKNLRVG 359
GV + + G H++ AR EV+LS GA ++PKLLMLSGIGP HL + I V + + VG
Sbjct: 245 GVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVG 304
Query: 360 ENLQEHLAMAGLTFLVNQPI 379
E+LQ+H + F QP+
Sbjct: 305 EHLQDH-PEGVVQFEAKQPM 323
>pdb|3NNE|A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|B Chain B, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|C Chain C, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|D Chain D, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|E Chain E, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|F Chain F, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|G Chain G, Crystal Structure Of Choline Oxidase S101a Mutant
pdb|3NNE|H Chain H, Crystal Structure Of Choline Oxidase S101a Mutant
Length = 546
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 159/320 (49%), Gaps = 18/320 (5%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLN--TNLILSPLNWG 126
E+D+I+VG G G VA RLSE P + L+EAG + ++ L+ L+ S +W
Sbjct: 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWD 72
Query: 127 YKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDW-AKLGNYGWSY 185
Y E ++ ++ R K +GG S N + + + D+W AK G GW+
Sbjct: 73 YPIEPQENGNSF-MRHARA-----KVMGGCSSHNACIAFWAPREDLDEWEAKYGATGWNA 126
Query: 186 NEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVDYN 245
P +K+ E + + ++ +HG G + + P A L A +AG P +N
Sbjct: 127 EAAWPLYKRLETNEDAG-PDAPHHGDSGPVHLMNVPPKDPTGVALLDACEQAGIPRAKFN 185
Query: 246 GKTQTGFARAQATLHKR---SRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKAC 302
T +++R +R SS+ YI PI ++ N T+ ++++ D ++
Sbjct: 186 TGTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFD-ADRRCT 244
Query: 303 GV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPV-IKNLRVG 359
GV + + G H++ AR EV+LS GA ++PKLLMLSGIGP HL + I V + + VG
Sbjct: 245 GVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVG 304
Query: 360 ENLQEHLAMAGLTFLVNQPI 379
E+LQ+H + F QP+
Sbjct: 305 EHLQDH-PEGVVQFEAKQPM 323
>pdb|1GPE|A Chain A, Glucose Oxidase From Penicillium Amagasakiense
pdb|1GPE|B Chain B, Glucose Oxidase From Penicillium Amagasakiense
Length = 587
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 155/316 (49%), Gaps = 27/316 (8%)
Query: 70 YDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPLNWG--Y 127
YD+II G G G TVA +L+E P K+L++E G Y + + +I P +G +
Sbjct: 25 YDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESN-------DGAIIEDPNAYGQIF 77
Query: 128 KTEKEDCRACLGLKGQRCP-WPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGWSY 185
T + + L R +GKG+GG++LIN +TR +K D W K+ G GW++
Sbjct: 78 GTTVDQNYLTVPLINNRTNNIKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNW 137
Query: 186 NEVLPYFKKAE--------RIQISELQNSSYHGTQGFI---GVDYTEYNTPMLDAFLQAG 234
+ + Y KKAE ++ N++ HGT G + D + +P++ A +
Sbjct: 138 DNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGARDNGQPWSPIMKALMNTV 197
Query: 235 MEAGYPLV-DYNGKTQTGFARAQATLHK-RSRRSSAKDYIDPIKKRCNLTVKDSSFVKKI 292
G P+ D+ G + L + + R +A+ ++ P +R NL + V K+
Sbjct: 198 SALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKV 257
Query: 293 LIDPVTK--KACGV-LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLN 349
L +A GV T K ++ + A+ EV+L+AG+ SP +L SGIG + L+ N
Sbjct: 258 LFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQAN 317
Query: 350 IPVIKNLRVGENLQEH 365
+ + +L VG N+Q+
Sbjct: 318 VTQLLDLPVGINMQDQ 333
>pdb|1JU2|A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond
pdb|1JU2|B Chain B, Crystal Structure Of The Hydroxynitrile Lyase From Almond
Length = 536
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 147/337 (43%), Gaps = 62/337 (18%)
Query: 48 EDGIFEQLEYKSSNKDQDLLLEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNY 107
D F L + D +L YD++IVG G GC +A LSE +K+L+LE G
Sbjct: 5 SDHDFSYLSFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERG----- 57
Query: 108 LVDIPVLNTNLILSPLNWGYKTEKEDCRACL--------GLKGQRCPWPSGKGVGGTSLI 159
+P N +L+ + Y ++ED G+ R G+ +GGTS+I
Sbjct: 58 --SLPTAYPN-VLTADGFVYNLQQEDDGKTPVERFVSEDGIDNVR-----GRVLGGTSII 109
Query: 160 NTMLYTRGNKRNYDDWAKLGNYGWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDY 219
N +Y R N Y W + V ++ E + + + S+
Sbjct: 110 NAGVYARANTSIY----SASGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTK------ 159
Query: 220 TEYNTPMLDAFLQAGMEA--GYPLVDYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKK 277
AFL+AG+ G+ L G TG +T + R +A + ++
Sbjct: 160 --------TAFLEAGVHPNHGFSLDHEEGTRITG-----STFDNKGTRHAADELLNK-GN 205
Query: 278 RCNLTVKDSSFVKKILIDPVTKKACGVLAT------IKGIDHKILARK--EVILSAGAFN 329
NL V + V+KI+ A G+ AT G H+ R EVI+SAG
Sbjct: 206 SNNLRVGVHASVEKIIF----SNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIG 261
Query: 330 SPKLLMLSGIGPQEHLNDLNIPVI-KNLRVGENLQEH 365
+P+LL+LSG+GP+ +L+ LNIPV+ + VG+ L ++
Sbjct: 262 TPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDN 298
>pdb|3GDN|A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde
pdb|3GDN|B Chain B, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde
pdb|3GDP|A Chain A, Hydroxynitrile Lyase From Almond, Monoclinic Crystal Form
pdb|3GDP|B Chain B, Hydroxynitrile Lyase From Almond, Monoclinic Crystal Form
Length = 521
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 147/337 (43%), Gaps = 62/337 (18%)
Query: 48 EDGIFEQLEYKSSNKDQDLLLEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNY 107
D F L + D +L YD++IVG G GC +A LSE +K+L+LE G
Sbjct: 5 SDHDFSYLSFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERG----- 57
Query: 108 LVDIPVLNTNLILSPLNWGYKTEKEDCRACL--------GLKGQRCPWPSGKGVGGTSLI 159
+P N +L+ + Y ++ED G+ R G+ +GGTS+I
Sbjct: 58 --SLPTAYPN-VLTADGFVYNLQQEDDGKTPVERFVSEDGIDNVR-----GRVLGGTSII 109
Query: 160 NTMLYTRGNKRNYDDWAKLGNYGWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDY 219
N +Y R N Y W + V ++ E + + + S+
Sbjct: 110 NAGVYARANTSIY----SASGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTK------ 159
Query: 220 TEYNTPMLDAFLQAGMEA--GYPLVDYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKK 277
AFL+AG+ G+ L G TG +T + R +A + ++
Sbjct: 160 --------TAFLEAGVHPNHGFSLDHEEGTRITG-----STFDNKGTRHAADELLNK-GN 205
Query: 278 RCNLTVKDSSFVKKILIDPVTKKACGVLAT------IKGIDHKILARK--EVILSAGAFN 329
NL V + V+KI+ A G+ AT G H+ R EVI+SAG
Sbjct: 206 SNNLRVGVHASVEKIIF----SNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIG 261
Query: 330 SPKLLMLSGIGPQEHLNDLNIPVI-KNLRVGENLQEH 365
+P+LL+LSG+GP+ +L+ LNIPV+ + VG+ L ++
Sbjct: 262 TPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDN 298
>pdb|3RED|A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|B Chain B, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|C Chain C, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|D Chain D, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|E Chain E, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|F Chain F, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|G Chain G, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|H Chain H, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|I Chain I, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|J Chain J, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|K Chain K, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
pdb|3RED|L Chain L, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase
Isozyme-1
Length = 521
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 147/331 (44%), Gaps = 51/331 (15%)
Query: 49 DGIFEQLEYKSSNKDQDLLLEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYL 108
D F L + D +L YD++IVG G GC +A LSE +K+L+LE G
Sbjct: 6 DHDFSYLSFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERG------ 57
Query: 109 VDIPVLNTNLILSPLNWGYKTEKED---CRACLGLKGQRCPWPSGKGVGGTSLINTMLYT 165
+P NL+ S + Y ++ED + G G+ +GGTS+IN +Y
Sbjct: 58 -TLPTAYPNLLTSD-GFIYNLQQEDDGQTPVERFVSGDGIDDVRGRVLGGTSMINAGVYA 115
Query: 166 RGNKRNYDDWAKLGNYGWSYNEVLPYFKKAERIQIS-ELQNSSYHGTQGFI--GVDYTEY 222
R N + + A I+ +L N +Y + I D +
Sbjct: 116 RANTKIF---------------------SASGIEWDMDLVNQTYDWVEDTIVYKPDKQAW 154
Query: 223 NTPMLDAFLQAGM--EAGYPLVDYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCN 280
+ AFL+AG+ + G+ L G TG +T R ++ + ++ N
Sbjct: 155 QSLTKTAFLEAGVLPDNGFSLDHEAGTRLTG-----STFDNNGTRHASDELLNKGDPN-N 208
Query: 281 LTVKDSSFVKKILIDPVTKKACGVLATIK---GIDHKILARKE--VILSAGAFNSPKLLM 335
L V + V+KI+ + + K G H+ R E VI+SAG SP+LL+
Sbjct: 209 LRVAVHASVEKIIFSSNSSGVTAIGVIYKDSNGTPHQAFVRGEGEVIVSAGPIGSPQLLL 268
Query: 336 LSGIGPQEHLNDLNIPVI-KNLRVGENLQEH 365
LSG+GP+ +L+ LNIPV+ + VG+ L ++
Sbjct: 269 LSGVGPESYLSSLNIPVVLSHPYVGQFLHDN 299
>pdb|1NAA|A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex
With Cellobionolactam
pdb|1NAA|B Chain B, Cellobiose Dehydrogenase Flavoprotein Fragment In Complex
With Cellobionolactam
Length = 541
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 125/334 (37%), Gaps = 63/334 (18%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYF------NYLV-----------DI 111
YD+IIVGAGPGG A+RLSE K+LLLE G Y+ DI
Sbjct: 2 PYDYIIVGAGPGGIIAADRLSEAGK-KVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDI 60
Query: 112 PVLNTNLILSPLNWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRN 171
P L +L + + + CL VGG + +N LY N +
Sbjct: 61 PGLFESLFTDSNPFWWCKDITVFAGCL--------------VGGGTSVNGALYWYPNDGD 106
Query: 172 YDDWAKLGNYGW--SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDA 229
+ + GW S+ PY K S L ++ + T G Y E + ++
Sbjct: 107 FSS-----SVGWPSSWTNHAPYTSKLS----SRLPSTDHPSTD---GQRYLEQSFNVVSQ 154
Query: 230 FLQAGMEAGYPLVDYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFV 289
L+ + D F + R Y+ R N T K + V
Sbjct: 155 LLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMV 214
Query: 290 KKILIDPVTKKACGVLATIKGIDHK----ILARKEVILSAGAFNSPKLLMLSGIGPQEHL 345
++ + + GV + + + VILSAGAF + ++L SGIGP + +
Sbjct: 215 SNVVRN--GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMI 272
Query: 346 NDLN--------IPVIK---NLRVGENLQEHLAM 368
+ +P NL VG N Q++ ++
Sbjct: 273 QTVQSNPTAAAALPPQNQWINLPVGMNAQDNPSI 306
>pdb|1KDG|A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose
Dehydrogenase
pdb|1KDG|B Chain B, Crystal Structure Of The Flavin Domain Of Cellobiose
Dehydrogenase
Length = 546
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 125/334 (37%), Gaps = 63/334 (18%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYF------NYLV-----------DI 111
YD+IIVGAGPGG A+RLSE K+LLLE G Y+ DI
Sbjct: 7 PYDYIIVGAGPGGIIAADRLSEAGK-KVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDI 65
Query: 112 PVLNTNLILSPLNWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRN 171
P L +L + + + CL VGG + +N LY N +
Sbjct: 66 PGLFESLFTDSNPFWWCKDITVFAGCL--------------VGGGTSVNGALYWYPNDGD 111
Query: 172 YDDWAKLGNYGW--SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDA 229
+ + GW S+ PY K S L ++ + T G Y E + ++
Sbjct: 112 FSS-----SVGWPSSWTNHAPYTSKLS----SRLPSTDHPSTD---GQRYLEQSFNVVSQ 159
Query: 230 FLQAGMEAGYPLVDYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFV 289
L+ + D F + R Y+ R N T K + V
Sbjct: 160 LLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMV 219
Query: 290 KKILIDPVTKKACGVLATIKGIDH----KILARKEVILSAGAFNSPKLLMLSGIGPQEHL 345
++ + + GV + + + VILSAGAF + ++L SGIGP + +
Sbjct: 220 SNVVRN--GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMI 277
Query: 346 NDLN--------IPVIK---NLRVGENLQEHLAM 368
+ +P NL VG N Q++ ++
Sbjct: 278 QTVQSNPTAAAALPPQNQWINLPVGMNAQDNPSI 311
>pdb|2EQ6|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ6|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ8|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ9|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|G Chain G, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|H Chain H, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|J Chain J, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|K Chain K, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
Length = 464
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 70 YDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLIL 120
YD I++G GPGG A R +++ K+L +EAG +++ + T +L
Sbjct: 7 YDLIVIGTGPGGYHAAIRAAQL-GLKVLAVEAGEVGGVCLNVGCIPTKALL 56
>pdb|3E1T|A Chain A, Structure And Action Of The Myxobacterial Chondrochloren
Halogenase Cndh, A New Variant Of Fad-Dependent
Halogenases
Length = 512
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 70 YDFIIVGAGPGGCTVANRLSEIPHWKILLLE 100
+D I++G GPGG T+A+ ++ H ++LLLE
Sbjct: 8 FDLIVIGGGPGGSTLASFVAMRGH-RVLLLE 37
>pdb|3JSK|A Chain A, Thiazole Synthase From Neurospora Crassa
pdb|3JSK|B Chain B, Thiazole Synthase From Neurospora Crassa
pdb|3JSK|C Chain C, Thiazole Synthase From Neurospora Crassa
pdb|3JSK|D Chain D, Thiazole Synthase From Neurospora Crassa
pdb|3JSK|E Chain E, Thiazole Synthase From Neurospora Crassa
pdb|3JSK|F Chain F, Thiazole Synthase From Neurospora Crassa
pdb|3JSK|G Chain G, Thiazole Synthase From Neurospora Crassa
pdb|3JSK|H Chain H, Thiazole Synthase From Neurospora Crassa
pdb|3JSK|I Chain I, Thiazole Synthase From Neurospora Crassa
pdb|3JSK|J Chain J, Thiazole Synthase From Neurospora Crassa
pdb|3JSK|K Chain K, Thiazole Synthase From Neurospora Crassa
pdb|3JSK|L Chain L, Thiazole Synthase From Neurospora Crassa
pdb|3JSK|M Chain M, Thiazole Synthase From Neurospora Crassa
pdb|3JSK|N Chain N, Thiazole Synthase From Neurospora Crassa
pdb|3JSK|O Chain O, Thiazole Synthase From Neurospora Crassa
pdb|3JSK|P Chain P, Thiazole Synthase From Neurospora Crassa
Length = 344
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 63 DQDLLLEYDFIIVGAGPGGCTVANRLSEI-PHWKILLLEAG 102
D D E D +IVGAG G + A LS + P +I ++EAG
Sbjct: 73 DLDAHAETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAG 113
>pdb|3K4K|A Chain A, Pyranose 2-Oxidase F454n Mutant
pdb|3K4L|A Chain A, Pyranose 2-Oxidase F454n Mutant In Complex With 2fg
pdb|3K4L|B Chain B, Pyranose 2-Oxidase F454n Mutant In Complex With 2fg
Length = 623
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 45 IKYDVVIVGSGPIGCTYAREL 65
>pdb|3K4J|A Chain A, Pyranose 2-Oxidase H450q Mutant
Length = 623
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 45 IKYDVVIVGSGPIGCTYAREL 65
>pdb|3K4B|A Chain A, Pyranose 2-Oxidase T169s Mutant
pdb|3LSK|A Chain A, Pyranose 2-Oxidase T169s Acetate Complex
pdb|3LSK|B Chain B, Pyranose 2-Oxidase T169s Acetate Complex
pdb|3LSK|C Chain C, Pyranose 2-Oxidase T169s Acetate Complex
pdb|3LSK|D Chain D, Pyranose 2-Oxidase T169s Acetate Complex
Length = 623
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 45 IKYDVVIVGSGPIGCTYAREL 65
>pdb|3BLY|A Chain A, Pyranose 2-Oxidase From Trametes Multicolor, E542kL537W
Length = 623
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 45 IKYDVVIVGSGPIGCTYAREL 65
>pdb|1TT0|A Chain A, Crystal Structure Of Pyranose 2-Oxidase
pdb|1TT0|B Chain B, Crystal Structure Of Pyranose 2-Oxidase
pdb|1TT0|C Chain C, Crystal Structure Of Pyranose 2-Oxidase
pdb|1TT0|D Chain D, Crystal Structure Of Pyranose 2-Oxidase
pdb|2IGK|A Chain A, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|B Chain B, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|C Chain C, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|D Chain D, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|E Chain E, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|F Chain F, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|G Chain G, Crystal Structure Of Recombinant Pyranose 2-Oxidase
pdb|2IGK|H Chain H, Crystal Structure Of Recombinant Pyranose 2-Oxidase
Length = 623
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 45 IKYDVVIVGSGPIGCTYAREL 65
>pdb|3LSH|A Chain A, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSH|B Chain B, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSH|C Chain C, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSH|D Chain D, Pyranose 2-Oxidase T169a, Monoclinic
pdb|3LSI|A Chain A, Pyranose 2-Oxidase T169a, Tetragonal
pdb|3LSI|B Chain B, Pyranose 2-Oxidase T169a, Tetragonal
Length = 623
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 45 IKYDVVIVGSGPIGCTYAREL 65
>pdb|3K4M|A Chain A, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|B Chain B, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|C Chain C, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|D Chain D, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|E Chain E, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|F Chain F, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|G Chain G, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
pdb|3K4M|H Chain H, Pyranose 2-Oxidase Y456w Mutant In Complex With 2fg
Length = 623
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 45 IKYDVVIVGSGPIGCTYAREL 65
>pdb|3BG6|A Chain A, Pyranose 2-Oxidase From Trametes Multicolor, E542k
Mutant
pdb|3BG6|B Chain B, Pyranose 2-Oxidase From Trametes Multicolor, E542k
Mutant
pdb|3BG6|C Chain C, Pyranose 2-Oxidase From Trametes Multicolor, E542k
Mutant
pdb|3BG6|D Chain D, Pyranose 2-Oxidase From Trametes Multicolor, E542k
Mutant
pdb|3BG6|E Chain E, Pyranose 2-Oxidase From Trametes Multicolor, E542k
Mutant
pdb|3BG6|F Chain F, Pyranose 2-Oxidase From Trametes Multicolor, E542k
Mutant
pdb|3BG6|G Chain G, Pyranose 2-Oxidase From Trametes Multicolor, E542k
Mutant
pdb|3BG6|H Chain H, Pyranose 2-Oxidase From Trametes Multicolor, E542k
Mutant
Length = 623
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 45 IKYDVVIVGSGPIGCTYAREL 65
>pdb|2IGN|A Chain A, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H167a Mutant
pdb|2IGN|B Chain B, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H167a Mutant
pdb|2IGN|D Chain D, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H167a Mutant
pdb|2IGN|C Chain C, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H167a Mutant
pdb|2IGN|E Chain E, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H167a Mutant
pdb|2IGN|F Chain F, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H167a Mutant
pdb|2IGN|H Chain H, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H167a Mutant
pdb|2IGN|G Chain G, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H167a Mutant
pdb|2IGO|A Chain A, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant
With 2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|B Chain B, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant
With 2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|D Chain D, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant
With 2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|C Chain C, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant
With 2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|E Chain E, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant
With 2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|F Chain F, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant
With 2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|H Chain H, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant
With 2- Fluoro-2-Deoxy-D-Glucose
pdb|2IGO|G Chain G, Crystal Structure Of Pyranose 2-Oxidase H167a Mutant
With 2- Fluoro-2-Deoxy-D-Glucose
pdb|3LSM|A Chain A, Pyranose 2-Oxidase H167a Mutant With Flavin N(5) Sulfite
Adduct
pdb|3LSM|B Chain B, Pyranose 2-Oxidase H167a Mutant With Flavin N(5) Sulfite
Adduct
pdb|3PL8|A Chain A, Pyranose 2-Oxidase H167a Complex With
3-Deoxy-3-Fluoro-Beta-D-Glucose
Length = 623
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 45 IKYDVVIVGSGPIGCTYAREL 65
>pdb|2IGM|A Chain A, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H548n Mutant
pdb|2IGM|B Chain B, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H548n Mutant
pdb|2IGM|D Chain D, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H548n Mutant
pdb|2IGM|C Chain C, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H548n Mutant
pdb|2IGM|E Chain E, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H548n Mutant
pdb|2IGM|F Chain F, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H548n Mutant
pdb|2IGM|G Chain G, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H548n Mutant
pdb|2IGM|H Chain H, Crystal Structure Of Recombinant Pyranose 2-Oxidase
H548n Mutant
Length = 623
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 45 IKYDVVIVGSGPIGCTYAREL 65
>pdb|3K4N|A Chain A, Pyranose 2-Oxidase F454aS455AY456A MUTANT
pdb|3K4N|B Chain B, Pyranose 2-Oxidase F454aS455AY456A MUTANT
Length = 623
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 45 IKYDVVIVGSGPIGCTYAREL 65
>pdb|3BG7|A Chain A, Pyranose 2-oxidase From Trametes Multicolor, L537g
Mutant
pdb|3BG7|B Chain B, Pyranose 2-oxidase From Trametes Multicolor, L537g
Mutant
pdb|3BG7|C Chain C, Pyranose 2-oxidase From Trametes Multicolor, L537g
Mutant
pdb|3BG7|D Chain D, Pyranose 2-oxidase From Trametes Multicolor, L537g
Mutant
pdb|3BG7|E Chain E, Pyranose 2-oxidase From Trametes Multicolor, L537g
Mutant
pdb|3BG7|F Chain F, Pyranose 2-oxidase From Trametes Multicolor, L537g
Mutant
pdb|3BG7|G Chain G, Pyranose 2-oxidase From Trametes Multicolor, L537g
Mutant
pdb|3BG7|H Chain H, Pyranose 2-oxidase From Trametes Multicolor, L537g
Mutant
Length = 623
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 45 IKYDVVIVGSGPIGCTYAREL 65
>pdb|3K4C|A Chain A, Pyranose 2-Oxidase H167aT169G MUTANT
pdb|3K4C|B Chain B, Pyranose 2-Oxidase H167aT169G MUTANT
pdb|3K4C|C Chain C, Pyranose 2-Oxidase H167aT169G MUTANT
pdb|3K4C|D Chain D, Pyranose 2-Oxidase H167aT169G MUTANT
Length = 623
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 45 IKYDVVIVGSGPIGCTYAREL 65
>pdb|3FDY|A Chain A, Pyranose 2-Oxidase Thermostable Triple Mutant,
T169gE542KV546C
Length = 623
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 45 IKYDVVIVGSGPIGCTYAREL 65
>pdb|2F6C|A Chain A, Reaction Geometry And Thermostability Of Pyranose
2-Oxidase From The White-Rot Fungus Peniophora Sp.,
Thermostability Mutant E542k
Length = 595
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 17 IKYDVVIVGSGPIGCTYAREL 37
>pdb|2F5V|A Chain A, Reaction Geometry And Thermostability Mutant Of Pyranose
2-Oxidase From The White-Rot Fungus Peniophora Sp
Length = 595
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 17 IKYDVVIVGSGPIGCTYAREL 37
>pdb|1TZL|A Chain A, Crystal Structure Of Pyranose 2-Oxidase From The
White-Rot Fungus Peniophora Sp.
pdb|1TZL|B Chain B, Crystal Structure Of Pyranose 2-Oxidase From The
White-Rot Fungus Peniophora Sp.
pdb|1TZL|C Chain C, Crystal Structure Of Pyranose 2-Oxidase From The
White-Rot Fungus Peniophora Sp.
pdb|1TZL|D Chain D, Crystal Structure Of Pyranose 2-Oxidase From The
White-Rot Fungus Peniophora Sp.
pdb|1TZL|E Chain E, Crystal Structure Of Pyranose 2-Oxidase From The
White-Rot Fungus Peniophora Sp.
pdb|1TZL|F Chain F, Crystal Structure Of Pyranose 2-Oxidase From The
White-Rot Fungus Peniophora Sp.
pdb|1TZL|G Chain G, Crystal Structure Of Pyranose 2-Oxidase From The
White-Rot Fungus Peniophora Sp.
pdb|1TZL|H Chain H, Crystal Structure Of Pyranose 2-Oxidase From The
White-Rot Fungus Peniophora Sp
Length = 622
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
++YD +IVG+GP GCT A L
Sbjct: 44 IKYDVVIVGSGPIGCTYAREL 64
>pdb|2DKH|A Chain A, Crystal Structure Of 3-Hydroxybenzoate Hydroxylase From
Comamonas Testosteroni, In Complex With The Substrate
pdb|2DKI|A Chain A, Crystal Structure Of 3-Hydroxybenzoate Hydroxylase From
Comamonas Testosteroni, Under Pressure Of Xenon Gas (12
Atm)
Length = 639
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLE 100
+ D +IVG GP G T+A +L+ P + ++E
Sbjct: 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVE 63
>pdb|3UKA|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKA|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKA|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKA|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKF|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
Length = 509
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEI--PHWKIL 97
+ D +++GAGP G A RL++I P W I+
Sbjct: 5 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWXIV 36
>pdb|3UKQ|A Chain A, Crystal Structure Of R327k Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|B Chain B, Crystal Structure Of R327k Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|C Chain C, Crystal Structure Of R327k Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|D Chain D, Crystal Structure Of R327k Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
Length = 510
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEI--PHWKIL 97
+ D +++GAGP G A RL++I P W I+
Sbjct: 5 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIV 36
>pdb|3UKK|A Chain A, Crystal Structure Of R182k-Udp-Galactopuranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|B Chain B, Crystal Structure Of R182k-Udp-Galactopuranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|C Chain C, Crystal Structure Of R182k-Udp-Galactopuranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|D Chain D, Crystal Structure Of R182k-Udp-Galactopuranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
Length = 517
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEI--PHWKIL 97
+ D +++GAGP G A RL++I P W I+
Sbjct: 5 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIV 36
>pdb|3UKL|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
Length = 510
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEI--PHWKIL 97
+ D +++GAGP G A RL++I P W I+
Sbjct: 5 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIV 36
>pdb|3UKH|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
Length = 519
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEI--PHWKIL 97
+ D +++GAGP G A RL++I P W I+
Sbjct: 5 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIV 36
>pdb|3UTE|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTF|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTG|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTH|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate
Udp-Galp In Reduced State
pdb|3UTH|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate
Udp-Galp In Reduced State
pdb|3UTH|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate
Udp-Galp In Reduced State
pdb|3UTH|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate
Udp-Galp In Reduced State
pdb|4GDC|A Chain A, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|B Chain B, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|C Chain C, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|D Chain D, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDD|A Chain A, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|B Chain B, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|C Chain C, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|D Chain D, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDE|A Chain A, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|B Chain B, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|C Chain C, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|D Chain D, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
Length = 513
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEI--PHWKIL 97
+ D +++GAGP G A RL++I P W I+
Sbjct: 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIV 40
>pdb|3UKP|A Chain A, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|B Chain B, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|C Chain C, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|D Chain D, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|E Chain E, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|F Chain F, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|G Chain G, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|H Chain H, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
Length = 509
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEI--PHWKIL 97
+ D +++GAGP G A RL++I P W I+
Sbjct: 5 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIV 36
>pdb|2GMH|A Chain A, Structure Of Porcine Electron Transfer Flavoprotein-
Ubiquinone Oxidoreductase In Complexed With Ubiquinone
pdb|2GMH|B Chain B, Structure Of Porcine Electron Transfer Flavoprotein-
Ubiquinone Oxidoreductase In Complexed With Ubiquinone
pdb|2GMJ|A Chain A, Structure Of Porcine Electron Transfer Flavoprotein-
Ubiquinone Oxidoreductase
pdb|2GMJ|B Chain B, Structure Of Porcine Electron Transfer Flavoprotein-
Ubiquinone Oxidoreductase
Length = 584
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEI 91
E D +IVGAGP G + A RL ++
Sbjct: 35 EADVVIVGAGPAGLSAATRLKQL 57
>pdb|1EBD|A Chain A, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
pdb|1EBD|B Chain B, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
Length = 455
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILS 121
+E + ++VGAGPGG A R +++ K+ ++E G+ +++ + + ++S
Sbjct: 2 IETETLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKGNLGGVCLNVGCIPSKALIS 54
>pdb|1B37|A Chain A, A 30 Angstrom U-Shaped Catalytic Tunnel In The Crystal
Structure Of Polyamine Oxidase
pdb|1B37|B Chain B, A 30 Angstrom U-Shaped Catalytic Tunnel In The Crystal
Structure Of Polyamine Oxidase
pdb|1B37|C Chain C, A 30 Angstrom U-Shaped Catalytic Tunnel In The Crystal
Structure Of Polyamine Oxidase
pdb|1B5Q|A Chain A, A 30 Angstrom U-Shaped Catalytic Tunnel In The Crystal
Structure Of Polyamine Oxidase
pdb|1B5Q|B Chain B, A 30 Angstrom U-Shaped Catalytic Tunnel In The Crystal
Structure Of Polyamine Oxidase
pdb|1B5Q|C Chain C, A 30 Angstrom U-Shaped Catalytic Tunnel In The Crystal
Structure Of Polyamine Oxidase
pdb|1H81|A Chain A, Structure Of Polyamine Oxidase In The Reduced State
pdb|1H81|B Chain B, Structure Of Polyamine Oxidase In The Reduced State
pdb|1H81|C Chain C, Structure Of Polyamine Oxidase In The Reduced State
pdb|1H82|A Chain A, Structure Of Polyamine Oxidase In Complex With Guazatine
pdb|1H82|B Chain B, Structure Of Polyamine Oxidase In Complex With Guazatine
pdb|1H82|C Chain C, Structure Of Polyamine Oxidase In Complex With Guazatine
pdb|1H83|A Chain A, Structure Of Polyamine Oxidase In Complex With 1,8-
Diaminooctane
pdb|1H83|B Chain B, Structure Of Polyamine Oxidase In Complex With 1,8-
Diaminooctane
pdb|1H83|C Chain C, Structure Of Polyamine Oxidase In Complex With 1,8-
Diaminooctane
pdb|1H84|A Chain A, Covalent Adduct Between Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 4.6
pdb|1H84|B Chain B, Covalent Adduct Between Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 4.6
pdb|1H84|C Chain C, Covalent Adduct Between Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 4.6
pdb|1H86|A Chain A, Covalent Adduct Between Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 7.0
pdb|1H86|B Chain B, Covalent Adduct Between Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 7.0
pdb|1H86|C Chain C, Covalent Adduct Between Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 7.0
Length = 472
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 73 IIVGAGPGGCTVANRLSEIPHWKILLLEA 101
I+VGAG G + A RLSE +L+LEA
Sbjct: 8 IVVGAGMSGISAAKRLSEAGITDLLILEA 36
>pdb|3KPF|A Chain A, X-Ray Structure Of The Mutant Lys300met Of Polyamine
Oxidase From Zea Mays
pdb|3KPF|B Chain B, X-Ray Structure Of The Mutant Lys300met Of Polyamine
Oxidase From Zea Mays
pdb|3KU9|A Chain A, X-Ray Structure Of The Mutant Lys300met Of Polyamine
Oxidase From Zea Mays In Complex With Spermine
pdb|3KU9|B Chain B, X-Ray Structure Of The Mutant Lys300met Of Polyamine
Oxidase From Zea Mays In Complex With Spermine
pdb|3L1R|A Chain A, X-Ray Structure Of The Mutant Lys300met Of Polyamine
Oxidase From Zea Mays In Complex With Spermidine
pdb|3L1R|B Chain B, X-Ray Structure Of The Mutant Lys300met Of Polyamine
Oxidase From Zea Mays In Complex With Spermidine
Length = 478
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 73 IIVGAGPGGCTVANRLSEIPHWKILLLEA 101
I+VGAG G + A RLSE +L+LEA
Sbjct: 8 IVVGAGMSGISAAKRLSEAGITDLLILEA 36
>pdb|3B9T|A Chain A, Crystal Structure Of Predicted AcetamidaseFORMAMIDASE
(YP_546212.1) From Methylobacillus Flagellatus Kt At
1.58 A Resolution
pdb|3B9T|B Chain B, Crystal Structure Of Predicted AcetamidaseFORMAMIDASE
(YP_546212.1) From Methylobacillus Flagellatus Kt At
1.58 A Resolution
pdb|3B9T|C Chain C, Crystal Structure Of Predicted AcetamidaseFORMAMIDASE
(YP_546212.1) From Methylobacillus Flagellatus Kt At
1.58 A Resolution
pdb|3B9T|D Chain D, Crystal Structure Of Predicted AcetamidaseFORMAMIDASE
(YP_546212.1) From Methylobacillus Flagellatus Kt At
1.58 A Resolution
Length = 484
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Query: 180 NYGWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGY 239
N+G+ YNE++ KK E + I EL + G + + Y TP D F +
Sbjct: 207 NWGFHYNELIEEPKKREVVTIYELDAT---GERNWARAFYNYRWTPQKDPFGVV-----H 258
Query: 240 PLVDYNG 246
P+VDY G
Sbjct: 259 PIVDYPG 265
>pdb|2I52|A Chain A, Crystal Structure Of Protein Pto0218 From Picrophilus
Torridus, Pfam Duf372
pdb|2I52|B Chain B, Crystal Structure Of Protein Pto0218 From Picrophilus
Torridus, Pfam Duf372
pdb|2I52|C Chain C, Crystal Structure Of Protein Pto0218 From Picrophilus
Torridus, Pfam Duf372
pdb|2I52|D Chain D, Crystal Structure Of Protein Pto0218 From Picrophilus
Torridus, Pfam Duf372
pdb|2I52|E Chain E, Crystal Structure Of Protein Pto0218 From Picrophilus
Torridus, Pfam Duf372
pdb|2I52|F Chain F, Crystal Structure Of Protein Pto0218 From Picrophilus
Torridus, Pfam Duf372
Length = 121
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 12/110 (10%)
Query: 224 TPMLDAFLQAGMEAGYPLVDYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIK------K 277
T + AF +AG++ G Y G A R + + +++ ++ K
Sbjct: 13 TDIQRAFFEAGIKLGAIFHQYTG-IPVNSENASMAEEFIERSTMIQPFVENVRISINNVK 71
Query: 278 RCNLTVKDSSFVKK-----ILIDPVTKKACGVLATIKGIDHKILARKEVI 322
R + T SS +K +LI+ KK GVL +G+D+ ++ KEV+
Sbjct: 72 RSSGTYSYSSLNEKMLHAEVLINYNGKKVLGVLNYDEGLDYPVMYAKEVL 121
>pdb|4B1B|A Chain A, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
pdb|4B1B|B Chain B, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
Length = 542
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 59 SSNKDQDLLLEYDFIIVGAGPGGCTVA 85
+ NK ++ +YD++++G GPGG A
Sbjct: 32 TKNKVEEHTYDYDYVVIGGGPGGMASA 58
>pdb|2EQ7|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Thermus Thermophilus Hb8 With Psbdo
pdb|2EQ7|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Thermus Thermophilus Hb8 With Psbdo
pdb|2YQU|A Chain A, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
pdb|2YQU|B Chain B, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
Length = 455
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 70 YDFIIVGAGPGGCTVANRLSEI 91
YD +++GAGPGG A R +++
Sbjct: 2 YDLLVIGAGPGGYVAAIRAAQL 23
>pdb|1NRJ|A Chain A, Signal Recognition Particle Receptor Beta-Subunit In
Complex With The Srx Domain From The Alpha-Subunit
Length = 158
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 283 VKDSSFVKKILIDPVTKKACGVLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQ 342
++ +SF+ +++ PVT+K A G D +L +++ NSP L + Q
Sbjct: 28 IQINSFISQLITSPVTRKESVANANTDGFDFNLLT-----INSEHKNSPSFNALFYLNKQ 82
Query: 343 EHLNDLNIPVIKNLRVGENLQEHLAMA 369
L + + L + + Q+ LA+
Sbjct: 83 PELYFVVTFAEQTLELNQETQQTLALV 109
>pdb|3RHA|A Chain A, The Crystal Structure Of Oxidoreductase From
Arthrobacter Aurescens
pdb|3RHA|B Chain B, The Crystal Structure Of Oxidoreductase From
Arthrobacter Aurescens
Length = 482
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 68 LEYDFIIVGAGPGGCTVANRL 88
L+ D +IVGAGP G T A L
Sbjct: 6 LDRDVVIVGAGPSGLTAAREL 26
>pdb|1I8T|A Chain A, Strcuture Of Udp-Galactopyranose Mutase From E.Coli
pdb|1I8T|B Chain B, Strcuture Of Udp-Galactopyranose Mutase From E.Coli
Length = 367
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 70 YDFIIVGAGPGGCTVANRLSEIPHWKILLLE 100
YD+IIVG+G G AN L ++ + K+L++E
Sbjct: 2 YDYIIVGSGLFGAVCANELKKL-NKKVLVIE 31
>pdb|3II4|A Chain A, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
pdb|3II4|B Chain B, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
Length = 466
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 67 LLEYDFIIVGAGPGGCTVANRLSEI 91
+ YD +++GAGPGG A R +++
Sbjct: 3 MTHYDVVVLGAGPGGYVAAIRAAQL 27
>pdb|3HDQ|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|I Chain I, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|J Chain J, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDY|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|I Chain I, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|J Chain J, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HE3|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|I Chain I, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|J Chain J, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3MJ4|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|I Chain I, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|J Chain J, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
Length = 397
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 53 EQLEYKSSNKDQDLLLEYDFIIVGAGPGGCTVANRLS 89
E+ E ++ +Q +D++IVGAG G +A RL+
Sbjct: 13 ERTEQTNTTNEQQESKGFDYLIVGAGFAGSVLAERLA 49
>pdb|2A8X|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2A8X|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
Length = 464
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 70 YDFIIVGAGPGGCTVANRLSEI 91
YD +++GAGPGG A R +++
Sbjct: 4 YDVVVLGAGPGGYVAAIRAAQL 25
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,563,528
Number of Sequences: 62578
Number of extensions: 609025
Number of successful extensions: 1558
Number of sequences better than 100.0: 66
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1460
Number of HSP's gapped (non-prelim): 90
length of query: 511
length of database: 14,973,337
effective HSP length: 103
effective length of query: 408
effective length of database: 8,527,803
effective search space: 3479343624
effective search space used: 3479343624
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)