BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy760
(511 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld
PE=3 SV=3
Length = 625
Score = 261 bits (667), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/301 (46%), Positives = 190/301 (63%), Gaps = 5/301 (1%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPLNWGYK 128
EYDFI++G G G VA+RLSE+P WK+LL+EAG IP + N I S +++ Y
Sbjct: 64 EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYN 123
Query: 129 TEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSYNEV 188
TE E ACL QRC WP GK +GGTS++N M+Y RGN+ +YDDWA GN GW+YN+V
Sbjct: 124 TEPEPM-ACLSSMEQRCYWPRGKVLGGTSVLNGMMYVRGNREDYDDWAADGNPGWAYNDV 182
Query: 189 LPYFKKAE-RIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVDYNGK 247
LP+FKK+E + + E+ + YH G + V YN P+ A L+AG E G+ + D NG+
Sbjct: 183 LPFFKKSEDNLDLDEV-GTEYHAKGGLLPVGKFPYNPPLSYAILKAGEELGFSVHDLNGQ 241
Query: 248 TQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGVLAT 307
TGF AQ T R SSA+ ++ P + R NL + ++ KILI P TK GV +
Sbjct: 242 NSTGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTATKILIHPHTKNVLGVEVS 301
Query: 308 IK-GIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR-VGENLQEH 365
+ G KIL +KEV+LSAGA NSP +L+LSG+GP++ L +N+ + NL VG+NL H
Sbjct: 302 DQFGSTRKILVKKEVVLSAGAVNSPHILLLSGVGPKDELQQVNVRTVHNLPGVGKNLHNH 361
Query: 366 L 366
+
Sbjct: 362 V 362
>sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura
pseudoobscura GN=Gld PE=3 SV=4
Length = 625
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/301 (45%), Positives = 188/301 (62%), Gaps = 3/301 (0%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPLNWGYK 128
EYDFI++G G G VA+RLSE+P WK+LL+EAG IP + N I S +++ Y
Sbjct: 64 EYDFIVIGGGSAGSVVASRLSEVPQWKVLLIEAGGDEPVGAQIPSMFLNFIGSDIDYRYN 123
Query: 129 TEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSYNEV 188
TE E ACL QRC WP GK +GGTS++N M+Y RGN+ +YDDWA GN GWSY +V
Sbjct: 124 TEPERM-ACLSSMEQRCYWPRGKVLGGTSVMNGMMYIRGNREDYDDWAAQGNPGWSYQDV 182
Query: 189 LPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLVDYNGKT 248
LP+FKK+E + + YH G + V YN P+ A L+AG E G+ + D NG+
Sbjct: 183 LPFFKKSEDNLELDAVGTEYHAKGGLLPVGKFPYNPPLSYALLKAGEEMGFSVQDLNGQN 242
Query: 249 QTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGVLATI 308
TGF AQ T R SSA+ ++ P + R NL + ++ V K+LI P TK GV +
Sbjct: 243 STGFMIAQMTARNGIRYSSARAFLRPARMRNNLHILLNTTVTKVLIHPGTKNVVGVEVSD 302
Query: 309 K-GIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR-VGENLQEHL 366
+ G KIL +KEVI+S GA NSP++L+LSG+GP+E L +N+ + +L VG+NL H+
Sbjct: 303 QFGSMRKILVKKEVIVSGGAVNSPQILLLSGVGPKEDLQKVNVRPVHHLPGVGKNLHNHV 362
Query: 367 A 367
A
Sbjct: 363 A 363
>sp|Q6UPE0|CHDH_RAT Choline dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Chdh
PE=1 SV=1
Length = 599
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 179/324 (55%), Gaps = 22/324 (6%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG--------HYFNYLVDIPV-LNTNLI 119
EY FI+VGAG GC +ANRL+E P+ ++LLLEAG + + +P L NL
Sbjct: 45 EYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVANLC 104
Query: 120 LSPLNWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLG 179
NW Y TE + GL G+ WP G+ GG+S +N M+Y RG+ +Y+ W + G
Sbjct: 105 DDKYNWYYHTEAQP-----GLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQG 159
Query: 180 NYGWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGY 239
GW Y LPYF+KA++ EL + Y G G + V + N P+ AFLQA +AGY
Sbjct: 160 AEGWDYAHCLPYFRKAQK---HELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGY 216
Query: 240 PLV-DYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 298
P D NG Q GF T+H+ R S+A Y+ P R NL + + V ++L +
Sbjct: 217 PFTEDMNGFQQEGFGWMDMTIHQGKRWSTASAYLRPALSRPNLRAEVQTLVSRVLFE--G 274
Query: 299 KKACGVLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR- 357
+A GV G HK +EVILS GA NSP+LLMLSG+G + L L IPV+ +L
Sbjct: 275 TRAVGVEYIKDGQSHKAYVSREVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLPG 334
Query: 358 VGENLQEHLAMAGLTFLVNQPIGL 381
VG+NLQ+HL + + QPI L
Sbjct: 335 VGQNLQDHLEIY-IQHACTQPITL 357
>sp|Q8NE62|CHDH_HUMAN Choline dehydrogenase, mitochondrial OS=Homo sapiens GN=CHDH PE=2
SV=2
Length = 594
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/311 (41%), Positives = 174/311 (55%), Gaps = 21/311 (6%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG--------HYFNYLVDIPV-LNTNLI 119
EY +++VGAG GC +A RL+E P ++LLLEAG ++ + +P L NL
Sbjct: 40 EYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLAGSKRLSWKIHMPAALVANLC 99
Query: 120 LSPLNWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLG 179
NW Y TE + GL G+ WP G+ GG+S +N M+Y RG+ +Y+ W + G
Sbjct: 100 DDRYNWCYHTEVQR-----GLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQG 154
Query: 180 NYGWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGY 239
GW Y LPYF+KA Q EL S Y G G + V + N P+ AFL+A +AGY
Sbjct: 155 ARGWDYAHCLPYFRKA---QGHELGASRYRGADGPLRVSRGKTNHPLHCAFLEATQQAGY 211
Query: 240 PLV-DYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 298
PL D NG Q GF T+H+ R S+A Y+ P R NL + + V ++L +
Sbjct: 212 PLTEDMNGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRTNLKAEAETLVSRVLFE--G 269
Query: 299 KKACGVLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR- 357
+A GV G H+ A KEVILS GA NSP+LLMLSGIG + L L IPV+ +L
Sbjct: 270 TRAVGVEYVKNGQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKKLGIPVVCHLPG 329
Query: 358 VGENLQEHLAM 368
VG+NLQ+HL +
Sbjct: 330 VGQNLQDHLEI 340
>sp|Q8BJ64|CHDH_MOUSE Choline dehydrogenase, mitochondrial OS=Mus musculus GN=Chdh PE=1
SV=1
Length = 596
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/324 (39%), Positives = 181/324 (55%), Gaps = 22/324 (6%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG--------HYFNYLVDIPV-LNTNLI 119
EY F++VGAG GC +A+RL+E P+ ++LLLEAG + + +P L +NL
Sbjct: 42 EYTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVSNLC 101
Query: 120 LSPLNWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLG 179
NW Y TE + G+ + WP G+ GG+S +N M+Y RG+ +Y+ W + G
Sbjct: 102 DDKYNWYYHTEPQP-----GMDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHREG 156
Query: 180 NYGWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGY 239
GW Y LPYF+KA+R EL + Y G G + V + N P+ AFLQA +AGY
Sbjct: 157 AEGWDYAHCLPYFRKAQR---HELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGY 213
Query: 240 PLV-DYNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 298
P D NG Q GF T+H+ R S+A Y+ P+ R NL + + V ++L +
Sbjct: 214 PFTEDMNGFQQEGFGWMDMTVHQGKRWSTACAYLHPVLSRPNLRAEVQTLVSRVLFE--G 271
Query: 299 KKACGVLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR- 357
+A GV G HK +EVILS GA NSP+LLMLSG+G + L L+IPV+ +L
Sbjct: 272 TRAVGVEYIKDGQRHKAYVSREVILSGGAINSPQLLMLSGVGNADDLRKLDIPVVCHLPG 331
Query: 358 VGENLQEHLAMAGLTFLVNQPIGL 381
VG+NLQ+HL + + QPI L
Sbjct: 332 VGQNLQDHLEVY-VQQACTQPITL 354
>sp|Q1IG70|BETA_PSEE4 Choline dehydrogenase OS=Pseudomonas entomophila (strain L48)
GN=betA PE=3 SV=1
Length = 565
Score = 216 bits (550), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 192/324 (59%), Gaps = 22/324 (6%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 124
E+D+IIVGAG G T+A RL+E +LLLEAG + F++ +P L L N
Sbjct: 4 EFDYIIVGAGSAGNTLATRLTEDASVSVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 125 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 183
W Y+T+ E + G+R GKG+GG+SLIN M Y RGN ++D WA+L G W
Sbjct: 64 WAYETDPEPF-----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDW 118
Query: 184 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPLV 242
+Y + LPYF+KAE ++ + YHG +G + V + N P+ A ++AG++AGYP
Sbjct: 119 TYLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVATPKAGNNPLFHAMVEAGVQAGYPRT 175
Query: 243 -DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 300
D NG Q GF ++ K+ RRSS A+ Y+D KKR NLT+ + ++L D K+
Sbjct: 176 EDLNGYQQEGFGPMDRSVTKKGRRSSTARGYLDQAKKRPNLTIVTHALSDRVLFD--GKR 233
Query: 301 ACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR- 357
A GV + + ++ ARKEVI+S+GA SP+LL SG+GP+ L L+IPV+ +L
Sbjct: 234 AVGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPG 293
Query: 358 VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL + L + QP+ L
Sbjct: 294 VGENLQDHLELY-LQYACTQPVSL 316
>sp|Q88CW6|BETA_PSEPK Choline dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=betA
PE=3 SV=1
Length = 565
Score = 215 bits (548), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 191/324 (58%), Gaps = 22/324 (6%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 124
E+D+IIVGAG G T+A RL+E +LLLEAG + F++ +P L L N
Sbjct: 4 EFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 125 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 183
W Y+T+ E + G+R GKG+GG+SLIN M Y RGN ++D WA+L G W
Sbjct: 64 WAYETDPEPY-----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDW 118
Query: 184 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPLV 242
+Y + LPYF+KAE ++ + YHG +G + V + N P+ A ++AG++AGYP
Sbjct: 119 TYLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRT 175
Query: 243 -DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 300
D NG Q GF T+ K RRSS A+ Y+D KKR NLT+ + ++L D K+
Sbjct: 176 EDLNGYQQEGFGPMDRTVTKNGRRSSTARGYLDQAKKRPNLTIVTHALTDRVLFD--GKR 233
Query: 301 ACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR- 357
A GV + + ++ ARKEVI+S+GA SP+LL SG+GP+ L L+IPV+ +L
Sbjct: 234 AIGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPG 293
Query: 358 VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL + L + QP+ L
Sbjct: 294 VGENLQDHLELY-LQYACTQPVSL 316
>sp|Q4K4K7|BETA_PSEF5 Choline dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 /
ATCC BAA-477) GN=betA PE=3 SV=1
Length = 567
Score = 214 bits (546), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 190/327 (58%), Gaps = 22/327 (6%)
Query: 66 LLLEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILS 121
+ EYD+IIVGAG G T+A RL+E +LLLEAG + F++ +P L L
Sbjct: 1 MAQEYDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGR 60
Query: 122 PLNWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GN 180
NW Y+T+ E + G+R GKG+GG+SLIN M Y RGN +YD WAKL G
Sbjct: 61 RYNWAYETDPEPH-----MNGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKLPGL 115
Query: 181 YGWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGY 239
W+Y + LPYF+KAE ++ + YHG +G + V + N P+ A ++AG++AGY
Sbjct: 116 EDWTYLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGY 172
Query: 240 PLV-DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPV 297
P D NG Q GF T+ + RR+S A+ Y+D KKR LT+ + KIL +
Sbjct: 173 PRTEDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDTAKKRSTLTIVTHALTDKILFE-- 230
Query: 298 TKKACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKN 355
K+A GV + ++ ARKEVI+S+GA SP+LL SG+GP+ L L+IPV+ +
Sbjct: 231 GKRAVGVSYLQGSTEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHD 290
Query: 356 LR-VGENLQEHLAMAGLTFLVNQPIGL 381
L VGENLQ+HL + L + QP+ L
Sbjct: 291 LPGVGENLQDHLELY-LQYACTQPVSL 316
>sp|B0KN19|BETA_PSEPG Choline dehydrogenase OS=Pseudomonas putida (strain GB-1) GN=betA
PE=3 SV=1
Length = 565
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 191/324 (58%), Gaps = 22/324 (6%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 124
E+D+IIVGAG G T+A RL+E +LLLEAG + F++ +P L L N
Sbjct: 4 EFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 125 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 183
W Y+T+ E + G+R GKG+GG+SLIN M Y RGN ++D WA+L G W
Sbjct: 64 WAYETDPEPH-----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLQDW 118
Query: 184 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPLV 242
+Y + LPYF+KAE ++ + YHG +G + V + N P+ A ++AG++AGYP
Sbjct: 119 TYLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVATPKAGNNPLFHAMVEAGVQAGYPRT 175
Query: 243 -DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 300
D NG Q GF ++ K RRSS A+ Y+D KKR NLT+ + ++L D K+
Sbjct: 176 EDLNGYQQEGFGPMDRSVTKNGRRSSTARGYLDQAKKRPNLTIVTHALSDRVLFD--GKR 233
Query: 301 ACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR- 357
A GV + + ++ ARKEVI+S+GA SP+LL SG+GP+ L L+IPV+ +L
Sbjct: 234 AVGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPG 293
Query: 358 VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL + L + QP+ L
Sbjct: 294 VGENLQDHLELY-LQYACTQPVSL 316
>sp|C3K3D3|BETA_PSEFS Choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25)
GN=betA PE=3 SV=1
Length = 567
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/325 (41%), Positives = 188/325 (57%), Gaps = 24/325 (7%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL----- 123
EYD+IIVGAG G T+A RL+E +LLLEAG +Y +D + PL
Sbjct: 4 EYDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGRRY 62
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 182
NW Y+T+ E + G+R GKG+GG+SLIN M Y RGN +YD+WAKL G
Sbjct: 63 NWAYETDPEPH-----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDNWAKLPGLEN 117
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPL 241
W+Y + LPYF+KAE I + YHG +G + V + N P+ A ++AG++AGYP
Sbjct: 118 WTYLDCLPYFRKAETRDIGP---NDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPR 174
Query: 242 V-DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ K RR S+A+ Y+D KKR LT+ + K+L + K
Sbjct: 175 TDDLNGYQQEGFGPMDRTVTKNGRRASTARGYLDTAKKRSTLTIVTHALTDKVLFE--GK 232
Query: 300 KACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV I + ++ ARKEV++ +GA SP+LL SG+GP + L L+IPV+ +L
Sbjct: 233 RAVGVRYLIGAAEERVEARARKEVLVCSGAIASPQLLQRSGVGPAKLLESLDIPVVHDLP 292
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL + L + QP+ L
Sbjct: 293 GVGENLQDHLELY-LQYACTQPVSL 316
>sp|A5WA97|BETA_PSEP1 Choline dehydrogenase OS=Pseudomonas putida (strain F1 / ATCC
700007) GN=betA PE=3 SV=1
Length = 565
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 190/324 (58%), Gaps = 22/324 (6%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 124
E+D+IIVGAG G T+A RL+E +LLLEAG + F++ +P L L N
Sbjct: 4 EFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 125 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 183
W Y+T+ E + G+R GKG+GG+SLIN M Y RGN ++D WA+L G W
Sbjct: 64 WAYETDPEPY-----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFDGWAELPGLEDW 118
Query: 184 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPLV 242
+Y + LPYF+KAE ++ + YHG G + V + N P+ A ++AG++AGYP
Sbjct: 119 TYLDCLPYFRKAE---TRDIGPNDYHGGDGPVSVATPKAGNNPLFHAMVEAGVQAGYPRT 175
Query: 243 -DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 300
D NG Q GF ++ K RRSS A+ Y+D KKR NLT+ + ++L D K+
Sbjct: 176 EDLNGYQQEGFGPMDRSVTKNGRRSSTARGYLDQAKKRPNLTIVTHALTDRVLFD--GKR 233
Query: 301 ACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR- 357
A GV + + ++ ARKEVI+S+GA SP+LL SG+GP+ L L+IPV+ +L
Sbjct: 234 AVGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPG 293
Query: 358 VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL + L + QP+ L
Sbjct: 294 VGENLQDHLELY-LQYACTQPVSL 316
>sp|Q3K5H3|BETA_PSEPF Choline dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1)
GN=betA PE=3 SV=1
Length = 567
Score = 211 bits (538), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 187/324 (57%), Gaps = 22/324 (6%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 124
E+D+IIVGAG G T+A RL+E +LLLEAG + F++ +P L L N
Sbjct: 4 EFDYIIVGAGSAGNTLATRLTEDEGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYN 63
Query: 125 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 183
W Y+T+ E + G+R GKG+GG+SLIN M Y RGN +YD WAKL G W
Sbjct: 64 WAYETDPEPH-----MDGRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKLPGLEDW 118
Query: 184 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPLV 242
SY + LPYF+KAE ++ + YHG G + V + N P+ A ++AG++AGYP
Sbjct: 119 SYLDCLPYFRKAE---TRDIGPNDYHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRT 175
Query: 243 -DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 300
D NG Q GF T+ RR+S A+ Y+D KKR LT+ + K+L + K+
Sbjct: 176 EDLNGYQQEGFGPMDRTVTPNGRRASTARGYLDVAKKRSTLTIVTHALTDKVLFE--GKR 233
Query: 301 ACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR- 357
A GV + + ++ ARKEVI+ +GA SP+LL SG+GP + L L+IPV+ +L
Sbjct: 234 AVGVRYLVGAAEERVEARARKEVIVCSGAIASPQLLQRSGVGPAKLLESLDIPVVHDLPG 293
Query: 358 VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL + L + QP+ L
Sbjct: 294 VGENLQDHLELY-LQYACTQPVSL 316
>sp|Q1QXE1|BETA1_CHRSD Choline dehydrogenase OS=Chromohalobacter salexigens (strain DSM
3043 / ATCC BAA-138 / NCIMB 13768) GN=betA PE=3 SV=1
Length = 560
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 186/322 (57%), Gaps = 20/322 (6%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 124
EYD+II+GAG G +A RL+E P ++LLLEAG + F++ +P L L N
Sbjct: 6 EYDYIIIGAGSAGNVLATRLTEDPDVQVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRYN 65
Query: 125 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYGW 183
W ++T+ E + +R GKG+GG+SLIN M Y RGN +YD+WAK+ G W
Sbjct: 66 WAFETDPEPY-----MNNRRMECGRGKGLGGSSLINGMCYLRGNALDYDNWAKIPGLEDW 120
Query: 184 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYT-EYNTPMLDAFLQAGMEAGYPLV 242
+Y + LPYFK+AE ++ + YHG G + V E N + AF++AG+EAGYP
Sbjct: 121 NYLQCLPYFKRAE---TRDIGPNDYHGGDGPVSVATPKEGNNELYGAFIRAGIEAGYPAT 177
Query: 243 -DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 300
D NG Q GF T RR+S A+ Y+D K+R NLT++ + I + K+
Sbjct: 178 EDVNGYQQEGFGPMDRTTTPNGRRASTARGYLDIAKQRPNLTIETHATTDVIEFE--GKR 235
Query: 301 ACGVLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR-VG 359
A GV KG ++ AR+EV+L AGA SP++L SG+G EHL + +IPV+ L VG
Sbjct: 236 AVGVSYERKGQAQRVRARREVLLCAGAIASPQILQRSGVGNPEHLEEFDIPVVHELPGVG 295
Query: 360 ENLQEHLAMAGLTFLVNQPIGL 381
ENLQ+HL M + + +PI L
Sbjct: 296 ENLQDHLEMY-IQYECKKPISL 316
>sp|Q4ZM63|BETA_PSEU2 Choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain
B728a) GN=betA PE=3 SV=1
Length = 568
Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/325 (41%), Positives = 185/325 (56%), Gaps = 24/325 (7%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL----- 123
EYD+II+GAG G T+A RL+E +LLLEAG +Y +D + PL
Sbjct: 6 EYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGRRY 64
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN +YD WAK G
Sbjct: 65 NWAYETEPEPH-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPGLED 119
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPL 241
WSY + LPYF+KAE ++ + YHG +G + V + N P+ A ++AG++AG+P
Sbjct: 120 WSYLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGFPR 176
Query: 242 VD-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ RR+S A+ Y+D KKR LT+ + +IL + K
Sbjct: 177 TDDLNGYQQEGFGPMDRTVTPNGRRASTARGYLDEAKKRSTLTIVTHALTDRILFE--GK 234
Query: 300 KACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV + D +I ARKEV+L GA SP++L SG+GP E LN L+IPV+ +L
Sbjct: 235 RAVGVAYLVGDSDTRIQARARKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPVVHDLP 294
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VG+NLQ+HL M L + QP+ L
Sbjct: 295 GVGQNLQDHLEMY-LQYACTQPVSL 318
>sp|Q48CM7|BETA_PSE14 Choline dehydrogenase OS=Pseudomonas syringae pv. phaseolicola
(strain 1448A / Race 6) GN=betA PE=3 SV=1
Length = 568
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/325 (41%), Positives = 185/325 (56%), Gaps = 24/325 (7%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL----- 123
EYD+II+GAG G T+A RL+E +LLLEAG +Y +D + PL
Sbjct: 6 EYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGRRY 64
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN +YD WAK G
Sbjct: 65 NWAYETEPEPH-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPGLED 119
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPL 241
WSY + LPYF+KAE ++ + YHG +G + V + N P+ A ++AG++AG+P
Sbjct: 120 WSYLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVTKPKAGNNPLFHAMVEAGVQAGFPR 176
Query: 242 VD-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ RR+S A+ Y+D KKR LT+ + +IL + K
Sbjct: 177 TDDLNGYQQEGFGPMDRTVTPNGRRASTARGYLDEAKKRSTLTIVTHALTDRILFE--GK 234
Query: 300 KACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV + D +I ARKEV+L GA SP++L SG+GP E LN L+IPV+ +L
Sbjct: 235 RAVGVAYLVGDSDTRIQARARKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPVVHDLP 294
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VG+NLQ+HL M L + QP+ L
Sbjct: 295 GVGQNLQDHLEMY-LQYACTQPVSL 318
>sp|Q88AE7|BETA_PSESM Choline dehydrogenase OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=betA PE=3 SV=1
Length = 568
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 134/325 (41%), Positives = 186/325 (57%), Gaps = 24/325 (7%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL----- 123
EYD+II+GAG G T+A RL+E +LLLEAG +Y +D + PL
Sbjct: 6 EYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGRRY 64
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN +YD WAK G
Sbjct: 65 NWAYETEPEPH-----MDNRRMECGRGKGLGGSSLINGMCYIRGNAMDYDGWAKEPGLED 119
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPL 241
WSY + LPYF+KAE ++ + YHG +G + V + N P+ A ++AG++AG+P
Sbjct: 120 WSYLDCLPYFRKAE---TRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGFPR 176
Query: 242 VD-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ + RR+S A+ Y+D KKR L++ + +IL + K
Sbjct: 177 TDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDEAKKRDTLSIVTHALTDRILFE--GK 234
Query: 300 KACGVLATIKGIDHKI--LARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV + D +I ARKEV+L GA SP++L SG+GP E LN L+IPV+ +L
Sbjct: 235 RAVGVAYLVGDSDTRIEVRARKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPVVHDLP 294
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VG+NLQ+HL M L + QP+ L
Sbjct: 295 GVGQNLQDHLEMY-LQYACTQPVSL 318
>sp|Q8UH55|BETA_AGRT5 Choline dehydrogenase OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=betA PE=3 SV=2
Length = 549
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/303 (39%), Positives = 176/303 (58%), Gaps = 15/303 (4%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHY-FNYLVDIPV-LNTNLILSPLNW 125
++ D++IVG+G G +A RLSE + ++++EAG F + +P L + + NW
Sbjct: 1 MQADYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNW 60
Query: 126 GYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSY 185
GY +E E L +R P GK +GG+S IN ++Y RG+ +++ W +LG GW+Y
Sbjct: 61 GYLSEPEP-----NLDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAY 115
Query: 186 NEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNTPMLDAFLQAGMEAGYPLV-DY 244
+VLPYFK+ E E + GT G + V + P+ AF+QAG +AG+ L DY
Sbjct: 116 ADVLPYFKRMEHSHGGE---EGWRGTDGPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDY 172
Query: 245 NGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACGV 304
NG Q GF + T+H R S+A Y+ P KR N+T+ + F +K++I+ +A GV
Sbjct: 173 NGSKQEGFGLMEQTIHNGRRWSAANAYLKPALKRGNVTLVN-GFARKVIIE--NGRAVGV 229
Query: 305 LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR-VGENLQ 363
+G + A +EVI+SA +FNSPKLLMLSGIGP HL D+ I V + VG NLQ
Sbjct: 230 EIERRGRVETVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQ 289
Query: 364 EHL 366
+H+
Sbjct: 290 DHM 292
>sp|C6DKY4|BETA_PECCP Choline dehydrogenase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=betA PE=3 SV=1
Length = 559
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 187/325 (57%), Gaps = 24/325 (7%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL---- 123
+EYD+II+GAG G +A RL+E +LLLEAG +Y +D + PL
Sbjct: 1 MEYDYIIIGAGSAGNVLATRLTEESDVSVLLLEAGGP-DYRLDFRTQMPAALAFPLQGKR 59
Query: 124 -NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNY 181
NW Y+T+ E + +R GKG+GG+SLIN M Y RGN ++D+WA + G
Sbjct: 60 YNWAYETDPEPH-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDNWATMPGLE 114
Query: 182 GWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYP 240
WSY + LPYF+KAE ++ ++ YHG G + V + N + A ++AG++AGYP
Sbjct: 115 DWSYLDCLPYFRKAE---TRDVGSNDYHGATGPVSVATPKMGNNELFHAMVEAGVQAGYP 171
Query: 241 LVD-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 298
D NG Q GF T+ + RR+S A+ Y+D K R NLT+ + KIL +
Sbjct: 172 RTDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKGRKNLTIVTHALTDKILFE--G 229
Query: 299 KKACGVLATIKGID-HKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
K+A GV A KG + AR+EV+L AGA SP++L SG+GP++ L L+IPV+ +L
Sbjct: 230 KRAVGV-AYFKGESPQTVQARREVLLCAGAIASPQILQRSGVGPKDLLQGLDIPVVHDLP 288
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 289 GVGENLQDHLEMY-LQYACKEPVSL 312
>sp|B5Z1R0|BETA_ECO5E Choline dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 /
EHEC) GN=betA PE=3 SV=1
Length = 562
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 128/325 (39%), Positives = 186/325 (57%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WAK G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--CK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHDLP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|Q8X6C6|BETA_ECO57 Choline dehydrogenase OS=Escherichia coli O157:H7 GN=betA PE=3 SV=1
Length = 562
Score = 202 bits (513), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 128/325 (39%), Positives = 186/325 (57%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WAK G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--CK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHDLP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|A4TNP2|BETA_YERPP Choline dehydrogenase OS=Yersinia pestis (strain Pestoides F)
GN=betA PE=3 SV=1
Length = 567
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 181/326 (55%), Gaps = 24/326 (7%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL---- 123
+EYD+II+GAG G +A RL+E +LLLEAG +Y +D + PL
Sbjct: 1 MEYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGKR 59
Query: 124 -NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNY 181
NW Y+T+ E + +R GKG+GG+SLIN M Y RGN ++D WA L G
Sbjct: 60 YNWAYETDPEPH-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLE 114
Query: 182 GWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYP 240
WSY + LPYF+KAE I + +HG +G + V + N P+ A + AG++AGYP
Sbjct: 115 DWSYLDCLPYFRKAETRDIGP---NDFHGGEGPVSVTTPKIGNNPLFHAMVAAGVQAGYP 171
Query: 241 LVD-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 298
D NG Q GF T+ + RR+S A+ Y+D + R NLT+ + +IL +
Sbjct: 172 RTDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--G 229
Query: 299 KKACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL 356
K+A GV L G AR+EV+L GA SP++L SGIGP E L L+IP+++ L
Sbjct: 230 KRATGVRYLKGDAGTGQTAYARREVLLCGGAIASPQILQRSGIGPAELLQRLDIPLVQAL 289
Query: 357 R-VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + QP+ L
Sbjct: 290 PGVGENLQDHLEMY-LQYSCKQPVSL 314
>sp|Q1CFR7|BETA_YERPN Choline dehydrogenase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=betA PE=3 SV=1
Length = 567
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 182/326 (55%), Gaps = 24/326 (7%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL---- 123
+EYD+II+GAG G +A RL+E +LLLEAG +Y +D + PL
Sbjct: 1 MEYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGKR 59
Query: 124 -NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNY 181
NW Y+T+ E + +R GKG+GG+SLIN M Y RGN ++D WA L G
Sbjct: 60 YNWAYETDPEPH-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLE 114
Query: 182 GWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYP 240
WSY + LPYF+KAE ++ + +HG +G + V + N P+ A + AG++AGYP
Sbjct: 115 DWSYLDCLPYFRKAE---TRDIGPNDFHGGEGPVSVTTPKIGNNPLFHAMVAAGVQAGYP 171
Query: 241 LVD-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 298
D NG Q GF T+ + RR+S A+ Y+D + R NLT+ + +IL +
Sbjct: 172 RTDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--G 229
Query: 299 KKACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL 356
K+A GV L G AR+EV+L GA SP++L SGIGP E L L+IP+++ L
Sbjct: 230 KRATGVRYLKGDAGTGQTAYARREVLLCGGAIASPQILQRSGIGPAELLQRLDIPLVQAL 289
Query: 357 R-VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + QP+ L
Sbjct: 290 PGVGENLQDHLEMY-LQYSCKQPVSL 314
>sp|Q8ZGW0|BETA_YERPE Choline dehydrogenase OS=Yersinia pestis GN=betA PE=3 SV=1
Length = 567
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 182/326 (55%), Gaps = 24/326 (7%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL---- 123
+EYD+II+GAG G +A RL+E +LLLEAG +Y +D + PL
Sbjct: 1 MEYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGKR 59
Query: 124 -NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNY 181
NW Y+T+ E + +R GKG+GG+SLIN M Y RGN ++D WA L G
Sbjct: 60 YNWAYETDPEPH-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLE 114
Query: 182 GWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYP 240
WSY + LPYF+KAE ++ + +HG +G + V + N P+ A + AG++AGYP
Sbjct: 115 DWSYLDCLPYFRKAE---TRDIGPNDFHGGEGPVSVTTPKIGNNPLFHAMVAAGVQAGYP 171
Query: 241 LVD-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 298
D NG Q GF T+ + RR+S A+ Y+D + R NLT+ + +IL +
Sbjct: 172 RTDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--G 229
Query: 299 KKACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL 356
K+A GV L G AR+EV+L GA SP++L SGIGP E L L+IP+++ L
Sbjct: 230 KRATGVRYLKGDAGTGQTAYARREVLLCGGAIASPQILQRSGIGPAELLQRLDIPLVQAL 289
Query: 357 R-VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + QP+ L
Sbjct: 290 PGVGENLQDHLEMY-LQYSCKQPVSL 314
>sp|Q1C932|BETA_YERPA Choline dehydrogenase OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=betA PE=3 SV=1
Length = 567
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 182/326 (55%), Gaps = 24/326 (7%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL---- 123
+EYD+II+GAG G +A RL+E +LLLEAG +Y +D + PL
Sbjct: 1 MEYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGKR 59
Query: 124 -NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNY 181
NW Y+T+ E + +R GKG+GG+SLIN M Y RGN ++D WA L G
Sbjct: 60 YNWAYETDPEPH-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLE 114
Query: 182 GWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYP 240
WSY + LPYF+KAE ++ + +HG +G + V + N P+ A + AG++AGYP
Sbjct: 115 DWSYLDCLPYFRKAE---TRDIGPNDFHGGEGPVSVTTPKIGNNPLFHAMVAAGVQAGYP 171
Query: 241 LVD-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 298
D NG Q GF T+ + RR+S A+ Y+D + R NLT+ + +IL +
Sbjct: 172 RTDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--G 229
Query: 299 KKACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL 356
K+A GV L G AR+EV+L GA SP++L SGIGP E L L+IP+++ L
Sbjct: 230 KRATGVRYLKGDAGTGQTAYARREVLLCGGAIASPQILQRSGIGPAELLQRLDIPLVQAL 289
Query: 357 R-VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + QP+ L
Sbjct: 290 PGVGENLQDHLEMY-LQYSCKQPVSL 314
>sp|B1JSR0|BETA_YERPY Choline dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3
(strain YPIII) GN=betA PE=3 SV=1
Length = 567
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 181/326 (55%), Gaps = 24/326 (7%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL---- 123
+EYD+II+GAG G +A RL+E +LLLEAG +Y +D + PL
Sbjct: 1 MEYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGKR 59
Query: 124 -NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNY 181
NW Y+T+ E + +R GKG+GG+SLIN M Y RGN ++D WA L G
Sbjct: 60 YNWAYETDPEPH-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLE 114
Query: 182 GWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYP 240
WSY + LPYF+KAE I + +HG +G + V + N P+ A + AG++AGYP
Sbjct: 115 DWSYLDCLPYFRKAETRDIGP---NDFHGGEGPVNVTTPKIGNNPLFHAMVAAGVQAGYP 171
Query: 241 LVD-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 298
D NG Q GF T+ + RR+S A+ Y+D + R NLT+ + +IL +
Sbjct: 172 RTDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--G 229
Query: 299 KKACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL 356
K+A GV L G AR+EV+L GA SP++L SGIGP E L L+IP+++ L
Sbjct: 230 KRATGVRYLKGDAGTGQTAYARREVLLCGGAIASPQILQRSGIGPAELLQRLDIPLVQAL 289
Query: 357 R-VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + QP+ L
Sbjct: 290 PGVGENLQDHLEMY-LQYSCKQPVSL 314
>sp|A7FKL6|BETA_YERP3 Choline dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b
(strain IP 31758) GN=betA PE=3 SV=1
Length = 567
Score = 200 bits (509), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 181/326 (55%), Gaps = 24/326 (7%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL---- 123
+EYD+II+GAG G +A RL+E +LLLEAG +Y +D + PL
Sbjct: 1 MEYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGKR 59
Query: 124 -NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNY 181
NW Y+T+ E + +R GKG+GG+SLIN M Y RGN ++D WA L G
Sbjct: 60 YNWAYETDPEPH-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLE 114
Query: 182 GWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYP 240
WSY + LPYF+KAE I + +HG +G + V + N P+ A + AG++AGYP
Sbjct: 115 DWSYLDCLPYFRKAETRDIGP---NDFHGGEGPVNVTTPKIGNNPLFHAMVAAGVQAGYP 171
Query: 241 LVD-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 298
D NG Q GF T+ + RR+S A+ Y+D + R NLT+ + +IL +
Sbjct: 172 RTDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--G 229
Query: 299 KKACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL 356
K+A GV L G AR+EV+L GA SP++L SGIGP E L L+IP+++ L
Sbjct: 230 KRATGVRYLKGDAGTGQTAYARREVLLCGGAIASPQILQRSGIGPAELLQRLDIPLVQAL 289
Query: 357 R-VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + QP+ L
Sbjct: 290 PGVGENLQDHLEMY-LQYSCKQPVSL 314
>sp|Q66D54|BETA_YERPS Choline dehydrogenase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=betA PE=3 SV=1
Length = 567
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 182/326 (55%), Gaps = 24/326 (7%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL---- 123
+EYD+II+GAG G +A RL+E +LLLEAG +Y +D + PL
Sbjct: 1 MEYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGKR 59
Query: 124 -NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNY 181
NW Y+T+ E + +R GKG+GG+SLIN M Y RGN ++D WA L G
Sbjct: 60 YNWAYETDPEPH-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLE 114
Query: 182 GWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYP 240
WSY + LPYF+KAE ++ + +HG +G + V + N P+ A + AG++AGYP
Sbjct: 115 DWSYLDCLPYFRKAE---TRDVGPNDFHGGEGPVSVTTPKIDNNPLFHAMVAAGVQAGYP 171
Query: 241 LVD-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 298
D NG Q GF T+ + RR+S A+ Y+D + R NLT+ + +IL +
Sbjct: 172 RTDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--G 229
Query: 299 KKACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL 356
K+A GV L G AR+EV+L GA SP++L SGIGP E L L+IP+++ L
Sbjct: 230 KRATGVSYLKGDAGTGQTAHARREVLLCGGAIASPQILQRSGIGPAELLQRLDIPLVQAL 289
Query: 357 R-VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + QP+ L
Sbjct: 290 PGVGENLQDHLEMY-LQYSCKQPVSL 314
>sp|B2K8U4|BETA_YERPB Choline dehydrogenase OS=Yersinia pseudotuberculosis serotype IB
(strain PB1/+) GN=betA PE=3 SV=1
Length = 567
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 130/326 (39%), Positives = 182/326 (55%), Gaps = 24/326 (7%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL---- 123
+EYD+II+GAG G +A RL+E +LLLEAG +Y +D + PL
Sbjct: 1 MEYDYIIIGAGSAGNVLAARLTEDADVTVLLLEAGGP-DYRLDFRTQMPAALAFPLQGKR 59
Query: 124 -NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNY 181
NW Y+T+ E + +R GKG+GG+SLIN M Y RGN ++D WA L G
Sbjct: 60 YNWAYETDPEPH-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWASLSGLE 114
Query: 182 GWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYP 240
WSY + LPYF+KAE ++ + +HG +G + V + N P+ A + AG++AGYP
Sbjct: 115 DWSYLDCLPYFRKAE---TRDVGPNDFHGGEGPVSVTTPKIDNNPLFHAMVAAGVQAGYP 171
Query: 241 LVD-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 298
D NG Q GF T+ + RR+S A+ Y+D + R NLT+ + +IL +
Sbjct: 172 RTDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQARPRNNLTIITHALTDRILFE--G 229
Query: 299 KKACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNL 356
K+A GV L G AR+EV+L GA SP++L SGIGP E L L+IP+++ L
Sbjct: 230 KRATGVSYLKGDAGTGQTAHARREVLLCGGAIASPQILQRSGIGPAELLQRLDIPLVQAL 289
Query: 357 R-VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + QP+ L
Sbjct: 290 PGVGENLQDHLEMY-LQYSCKQPVSL 314
>sp|B7UJG4|BETA_ECO27 Choline dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69
/ EPEC) GN=betA PE=3 SV=1
Length = 556
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 128/325 (39%), Positives = 184/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIP-VLNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AGM+AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVITSKPGVNPLFEAMIEAGMQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|Q0T7N0|BETA_SHIF8 Choline dehydrogenase OS=Shigella flexneri serotype 5b (strain
8401) GN=betA PE=3 SV=1
Length = 556
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 185/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIP-VLNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|B7N8L3|BETA_ECOLU Choline dehydrogenase OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=betA PE=3 SV=1
Length = 556
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 185/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIP-VLNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ +L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGSAELLAEFDIPLVHDLP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|B6I074|BETA_ECOSE Choline dehydrogenase OS=Escherichia coli (strain SE11) GN=betA
PE=3 SV=1
Length = 556
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 185/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIP-VLNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|A7ZWV4|BETA_ECOHS Choline dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=betA
PE=3 SV=1
Length = 556
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 185/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIP-VLNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|B7M2V5|BETA_ECO8A Choline dehydrogenase OS=Escherichia coli O8 (strain IAI1) GN=betA
PE=3 SV=1
Length = 556
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 185/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIP-VLNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|B7L439|BETA_ECO55 Choline dehydrogenase OS=Escherichia coli (strain 55989 / EAEC)
GN=betA PE=3 SV=1
Length = 556
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 185/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIP-VLNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|A7ZI50|BETA_ECO24 Choline dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A
/ ETEC) GN=betA PE=3 SV=1
Length = 556
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 185/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIP-VLNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|Q8FKI9|BETA_ECOL6 Choline dehydrogenase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=betA PE=3 SV=2
Length = 556
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 184/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIP-VLNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNY-G 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ +
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPSLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AGM+AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGMQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ RR+S A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|P17444|BETA_ECOLI Choline dehydrogenase OS=Escherichia coli (strain K12) GN=betA PE=1
SV=1
Length = 556
Score = 198 bits (504), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 185/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIP-VLNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDMGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|B1J0W6|BETA_ECOLC Choline dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=betA PE=3 SV=1
Length = 556
Score = 198 bits (504), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 185/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIP-VLNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDMGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|B1XE52|BETA_ECODH Choline dehydrogenase OS=Escherichia coli (strain K12 / DH10B)
GN=betA PE=3 SV=1
Length = 556
Score = 198 bits (504), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 185/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIP-VLNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDMGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ + RR S+A+ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|A6T613|BETA_KLEP7 Choline dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=betA PE=3 SV=1
Length = 554
Score = 198 bits (504), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 183/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WAK G
Sbjct: 61 NWAYETEPEPY-----MNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLEH 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE I + YHG G + V + N P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDIGP---NDYHGGDGPVSVTTPKPGNNPLFEAMVEAGVQAGYPR 172
Query: 242 VD-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ + RR+S A+ Y+D + R NLT++ + I+ K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQARGRPNLTIRTHALTDHIIF--AGK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I K A KEV+L AGA SP++L SG+G E L +IPV+ +L
Sbjct: 231 RAVGVEWLEGESTIPSKATANKEVLLCAGAIASPQILQRSGVGNPELLRQFDIPVVHDLP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|Q6D6D9|BETA_ERWCT Choline dehydrogenase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=betA PE=3 SV=1
Length = 559
Score = 198 bits (504), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 130/325 (40%), Positives = 184/325 (56%), Gaps = 24/325 (7%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL---- 123
+EYD+II+GAG G +A RL+E +LLLEAG +Y +D + PL
Sbjct: 1 MEYDYIIIGAGSAGNVLAARLTEESDVSVLLLEAGGP-DYRLDFRTQMPAALAFPLQGKR 59
Query: 124 -NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNY 181
NW Y+T+ E + +R GKG+GG+SLIN M Y RGN ++D WA + G
Sbjct: 60 YNWAYETDPEPH-----MNDRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWATMSGLE 114
Query: 182 GWSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYP 240
WSY + LPYF+KAE ++ + YHG G + V + N + A ++AG++AGYP
Sbjct: 115 DWSYLDCLPYFRKAE---TRDVGANDYHGASGPVSVTTPKMGNNELFHAMVEAGVQAGYP 171
Query: 241 LVD-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVT 298
D NG Q GF T+ + RR+S A+ Y+D K R NLT+ + +IL D
Sbjct: 172 RTDDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKSRKNLTIVTHALTDRILFD--G 229
Query: 299 KKACGVLATIKGIDHKIL-ARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
K+A GV A KG + AR+EV+L AGA SP++L SG+GP++ L L+I V+ +L
Sbjct: 230 KRAVGV-AYFKGESAQTAKARREVLLCAGAIASPQILQRSGVGPKDLLQRLDISVVHDLP 288
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 289 GVGENLQDHLEMY-LQYACKEPVSL 312
>sp|Q1RFM3|BETA_ECOUT Choline dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC)
GN=betA PE=3 SV=2
Length = 562
Score = 198 bits (504), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 183/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIP-VLNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ RR+S A+ Y+D K R NLT++ + I D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIFFD--GK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|B7MCD0|BETA_ECO45 Choline dehydrogenase OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=betA PE=3 SV=1
Length = 562
Score = 198 bits (504), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 183/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIP-VLNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ RR+S A+ Y+D K R NLT++ + I D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIFFD--GK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|Q0TKW1|BETA_ECOL5 Choline dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=betA PE=3 SV=2
Length = 556
Score = 198 bits (503), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 184/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIP-VLNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WA+ G
Sbjct: 61 NWAYETEPEPF-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLEN 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE + E + YHG G + V ++ P+ +A ++AGM+AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDVGE---NDYHGGDGPVSVITSKPGVNPLFEAMIEAGMQAGYPR 172
Query: 242 V-DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ RR+S ++ Y+D K R NLT++ + I+ D K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPHGRRASTSRGYLDQAKSRPNLTIRTHAMTDHIIFD--GK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I + A KEV+L AGA SP++L SG+G E L + +IP++ L
Sbjct: 231 RAVGVEWLEGDSTIPTRAAANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|Q6LGH5|BETA_PHOPR Choline dehydrogenase OS=Photobacterium profundum GN=betA PE=3 SV=1
Length = 568
Score = 198 bits (503), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 129/319 (40%), Positives = 176/319 (55%), Gaps = 19/319 (5%)
Query: 70 YDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHY-FNYLVDIP-VLNTNLILSPLNWGY 127
YD+IIVGAG GC +A+RLS ILLLEAG + + +P L+ + W +
Sbjct: 5 YDYIIVGAGSAGCVLADRLSASGEHYILLLEAGGSDRSIFIQMPTALSYPMNSEKYAWQF 64
Query: 128 KTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKLGNYGWSYNE 187
+T+ E GL + P G+ +GG+S IN M+Y RG+ +YD+W + G GWSY E
Sbjct: 65 ETQPE-----AGLDSRSLHCPRGRVLGGSSSINGMVYVRGHACDYDEWVEQGAEGWSYQE 119
Query: 188 VLPYFKKAERIQISELQNSSYHGTQGFIGV---DYTEYNTPMLDAFLQAGMEAGYPLV-D 243
LPYF++AE E +Y G G +G + E N P+ AF+ AG +AGYP D
Sbjct: 120 CLPYFRRAESWIHGE---DTYRGGDGPVGTCNGNDMELN-PLYQAFIDAGQQAGYPKTDD 175
Query: 244 YNGKTQTGFARAQATLHKRSRRSSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKKACG 303
YNG Q GF T+ K R S++ Y+ KR NLTV+ +K+LI K+A G
Sbjct: 176 YNGYQQEGFGPMHMTVDKGIRASTSNAYLRRAMKRSNLTVRKGVVTRKVLIK--NKQAIG 233
Query: 304 VLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR-VGENL 362
V + G + A EV+LSAG+ SP+LL LSGIGP+ L I V +L VGENL
Sbjct: 234 VEIEVGGKVQSVYANTEVLLSAGSVGSPQLLQLSGIGPKAVLEQAGIAVKHDLPGVGENL 293
Query: 363 QEHLAMAGLTFLVNQPIGL 381
Q+HL + + +QPI L
Sbjct: 294 QDHLEVY-FQYACHQPITL 311
>sp|A9AMZ9|BETA_BURM1 Choline dehydrogenase OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=betA PE=3 SV=1
Length = 566
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/322 (39%), Positives = 181/322 (56%), Gaps = 20/322 (6%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 124
EYD+II GAG G +A RL+E P+ +LLLEAG + F++ +P L L N
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 125 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWA-KLGNYGW 183
W Y+T+ E + +R GKG+GG+SLIN M Y RGN +YD+WA G W
Sbjct: 65 WAYETDPEPH-----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWATHQGLENW 119
Query: 184 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYN-TPMLDAFLQAGMEAGYPLV 242
+Y + LPYFKKAE I + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 120 TYLDCLPYFKKAETRDIGP---NDYHGGDGPVSVTTSKPGVNPLFEAMVEAGVQAGYPRT 176
Query: 243 -DYNGKTQTGFARAQATLHKRSRR-SSAKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 300
D NG Q GF T+ + RR S+A+ Y+D K R NL + + +IL D K+
Sbjct: 177 EDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKTRPNLEIVTHALADRILFD--GKR 234
Query: 301 ACGVLATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR-VG 359
A GV AR+EV++ +GA SP+LL SG+GP L +L+IP++ +L VG
Sbjct: 235 ASGVTYLRGNERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGVG 294
Query: 360 ENLQEHLAMAGLTFLVNQPIGL 381
+NLQ+HL M + + +P+ L
Sbjct: 295 QNLQDHLEMY-IQYECKEPVSL 315
>sp|B5Y008|BETA_KLEP3 Choline dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=betA
PE=3 SV=1
Length = 554
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/325 (39%), Positives = 182/325 (56%), Gaps = 22/325 (6%)
Query: 68 LEYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPL 123
+++D+II+GAG G +A RL+E P+ +LLLEAG + F++ +P L L
Sbjct: 1 MQFDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGGPDYRFDFRTQMPAALAYPLQGKRY 60
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAK-LGNYG 182
NW Y+TE E + +R GKG+GG+SLIN M Y RGN + D+WAK G
Sbjct: 61 NWAYETEPEPY-----MNHRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAKEPGLEH 115
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPL 241
WSY + LPY++KAE I + YHG G + V + N P+ +A + AG++AGYP
Sbjct: 116 WSYLDCLPYYRKAETRDIGP---NDYHGGDGPVSVTTPKPGNNPLFEAMVTAGVQAGYPR 172
Query: 242 VD-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ + RR+S A+ Y+D + R NLT++ + I+ K
Sbjct: 173 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQARGRPNLTIRTHALTDHIIF--AGK 230
Query: 300 KACGV--LATIKGIDHKILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV L I K A KEV+L AGA SP++L SG+G E L +IPV+ +L
Sbjct: 231 RAVGVEWLEGESTIPSKATANKEVLLCAGAIASPQILQRSGVGNPELLRQFDIPVVHDLP 290
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VGENLQ+HL M L + +P+ L
Sbjct: 291 GVGENLQDHLEMY-LQYECKEPVSL 314
>sp|A4XPI5|BETA_PSEMY Choline dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betA
PE=3 SV=1
Length = 565
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 183/325 (56%), Gaps = 24/325 (7%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAGHYFNYLVDIPVLNTNLILSPL----- 123
E+D+II+GAG G +A RL+E +LLLEAG +Y +D + PL
Sbjct: 4 EFDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGGP-DYRLDFRTQMPAALAFPLQGRRY 62
Query: 124 NWGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWAKL-GNYG 182
NW Y+T+ E + +R GKG+GG+SLIN M Y RGN ++D+WAK G
Sbjct: 63 NWAYETDPEPH-----MNNRRMECGRGKGLGGSSLINGMCYIRGNALDFDNWAKAKGLED 117
Query: 183 WSYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEY-NTPMLDAFLQAGMEAGYPL 241
W+Y++ LPYF+KAE I + YHG G + V + N P+ A ++AG++AGYP
Sbjct: 118 WTYHDCLPYFRKAESRDIGP---NDYHGGDGPVSVTTPKAGNNPLFHAMVEAGVQAGYPR 174
Query: 242 V-DYNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTK 299
D NG Q GF T+ + RR+S A+ Y+D ++R NLT+ + +IL D K
Sbjct: 175 TDDLNGYQQEGFGPMDRTVTPQGRRASTARGYLDQARERPNLTIVTHATTDRILFD--GK 232
Query: 300 KACGVLATIKGIDH--KILARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR 357
+A GV I + + AR+EV+L AGA SP++L SG+GP L +L+I ++ L
Sbjct: 233 RASGVSYLIGNANDATEARARREVLLCAGAIASPQILQRSGVGPAALLRELDIALVHELP 292
Query: 358 -VGENLQEHLAMAGLTFLVNQPIGL 381
VG+NLQ+HL M L + QP+ L
Sbjct: 293 GVGQNLQDHLEMY-LQYACTQPVSL 316
>sp|A4JJG6|BETA_BURVG Choline dehydrogenase OS=Burkholderia vietnamiensis (strain G4 /
LMG 22486) GN=betA PE=3 SV=1
Length = 566
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/323 (38%), Positives = 187/323 (57%), Gaps = 22/323 (6%)
Query: 69 EYDFIIVGAGPGGCTVANRLSEIPHWKILLLEAG---HYFNYLVDIPV-LNTNLILSPLN 124
EYD+II GAG G +A RL+E P+ +LLLEAG + F++ +P L L N
Sbjct: 5 EYDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGGPDYRFDFRTQMPAALAYPLQGRRYN 64
Query: 125 WGYKTEKEDCRACLGLKGQRCPWPSGKGVGGTSLINTMLYTRGNKRNYDDWA-KLGNYGW 183
W Y+T+ E + +R GKG+GG+SLIN M Y RGN +YD+W+ G W
Sbjct: 65 WAYETDPEPH-----MDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHQGLERW 119
Query: 184 SYNEVLPYFKKAERIQISELQNSSYHGTQGFIGVDYTEYNT-PMLDAFLQAGMEAGYPLV 242
+Y + LPYF+KAE ++ + YHG G + V ++ P+ +A ++AG++AGYP
Sbjct: 120 TYLDCLPYFRKAE---TRDVGPNDYHGGDGPVSVTTSKPGANPLFEAMVEAGVQAGYPRT 176
Query: 243 D-YNGKTQTGFARAQATLHKRSRRSS-AKDYIDPIKKRCNLTVKDSSFVKKILIDPVTKK 300
D NG Q GF T+ + RR+S A+ Y+D K R NL + + +IL D K+
Sbjct: 177 DDLNGYQQEGFGPMDRTVTPKGRRASTARGYLDQAKTRPNLEIVTHALADRILFD--GKR 234
Query: 301 ACGVLATIKGIDHKIL-ARKEVILSAGAFNSPKLLMLSGIGPQEHLNDLNIPVIKNLR-V 358
A GV A ++G + AR+EV++ +GA SP+LL SG+GP L +L+IP++ +L V
Sbjct: 235 ASGV-AYLRGSERATAHARREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGV 293
Query: 359 GENLQEHLAMAGLTFLVNQPIGL 381
G+NLQ+HL M + + +P+ L
Sbjct: 294 GQNLQDHLEMY-IQYECKEPVSL 315
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 194,398,445
Number of Sequences: 539616
Number of extensions: 8559528
Number of successful extensions: 21042
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 20074
Number of HSP's gapped (non-prelim): 198
length of query: 511
length of database: 191,569,459
effective HSP length: 122
effective length of query: 389
effective length of database: 125,736,307
effective search space: 48911423423
effective search space used: 48911423423
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)