Query psy7601
Match_columns 101
No_of_seqs 108 out of 316
Neff 5.5
Searched_HMMs 13730
Date Fri Aug 16 22:34:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7601.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7601hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1x58a1 a.4.1.1 (A:8-56) Hypot 77.9 0.34 2.5E-05 26.7 0.9 30 9-38 3-32 (49)
2 d1qsda_ a.7.5.1 (A:) Tubulin c 50.8 21 0.0015 21.7 5.5 44 48-91 56-99 (102)
3 d1uuja_ a.221.1.1 (A:) Lissenc 46.7 12 0.00087 21.8 3.7 47 46-94 22-73 (76)
4 d1ihga1 a.118.8.1 (A:197-365) 35.7 33 0.0024 20.5 4.8 47 54-100 123-169 (169)
5 d1g7da_ a.71.1.1 (A:) Endoplas 34.1 38 0.0027 20.3 4.8 37 55-91 60-96 (106)
6 d2c0ga1 a.71.1.1 (A:1146-1251) 32.7 37 0.0027 20.4 4.6 35 56-90 62-96 (106)
7 d1q44a_ c.37.1.5 (A:) Putative 28.2 30 0.0022 23.9 4.0 68 18-89 183-258 (320)
8 d3bfxa1 c.37.1.5 (A:12-296) Su 28.1 27 0.002 23.5 3.7 28 51-78 183-210 (285)
9 d1ls6a_ c.37.1.5 (A:) Aryl sul 28.1 31 0.0022 23.3 4.0 30 49-78 184-213 (288)
10 d1ov9a_ a.155.1.1 (A:) H-NS-li 27.8 24 0.0017 18.6 2.6 16 56-71 22-37 (45)
11 d1g3ma_ c.37.1.5 (A:) Estrogen 26.0 31 0.0022 23.3 3.7 31 49-79 188-218 (290)
12 d1j99a_ c.37.1.5 (A:) Hydroxys 24.4 40 0.0029 22.6 4.0 32 48-79 180-211 (284)
13 d1q20a_ c.37.1.5 (A:) Choleste 23.8 42 0.003 22.2 4.0 29 50-78 192-220 (294)
14 d1fmja_ c.37.1.5 (A:) Retinol 23.0 30 0.0022 23.6 3.1 31 49-79 239-269 (342)
No 1
>d1x58a1 a.4.1.1 (A:8-56) Hypothetical protein 4930532d21rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.91 E-value=0.34 Score=26.65 Aligned_cols=30 Identities=13% Similarity=0.331 Sum_probs=27.4
Q ss_pred cccchhHHHHHHHHHHHHHHhHhhhhhhhh
Q psy7601 9 YLRKNNQSVLKKAVDILCQCRQTLMYTYVF 38 (101)
Q Consensus 9 ~Ls~~d~~fl~~A~~~L~~cRrvLkwSY~f 38 (101)
+.+..|+-+|-.+++..-..=..+-|||+|
T Consensus 3 nft~eEv~YL~~GVK~~G~~WNsILWs~PF 32 (49)
T d1x58a1 3 DFTKEEVNYLFHGVKTMGNHWNSILWSFPF 32 (49)
T ss_dssp SCCHHHHHHHHHHHHHHCSCHHHHHHHSCC
T ss_pred cccHHHHHHHHHHHHHhcchhhhhhhccCC
Confidence 567889999999999999999999999997
No 2
>d1qsda_ a.7.5.1 (A:) Tubulin chaperone cofactor A {Baker's yeast (Saccharomyces cerevisiae), Rbl2p [TaxId: 4932]}
Probab=50.77 E-value=21 Score=21.71 Aligned_cols=44 Identities=14% Similarity=0.277 Sum_probs=33.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHH
Q psy7601 48 SVLFEDNQKDLESATEKLSEYLERDITSENLANIKQQVQDKYRL 91 (101)
Q Consensus 48 ~~lFE~~Q~~lE~~vE~Ls~~le~~~~~~~~~~~k~~v~~~t~~ 91 (101)
+.++-+.+..|+.++.+|..+++..-+.+++.+.|.-+...-..
T Consensus 56 ~~mipd~~~RL~~a~~~L~~~l~~~~~~ee~~~akeal~~ak~~ 99 (102)
T d1qsda_ 56 KRLLPTLYEKIREFKEDLEQFLKTYQGTEDVSDARSAITSAQEL 99 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 45678889999999999999998765566777777766544433
No 3
>d1uuja_ a.221.1.1 (A:) Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=46.69 E-value=12 Score=21.84 Aligned_cols=47 Identities=15% Similarity=0.197 Sum_probs=29.4
Q ss_pred CCchhHHHHHHHH-----HHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHH
Q psy7601 46 NQSVLFEDNQKDL-----ESATEKLSEYLERDITSENLANIKQQVQDKYRLVKI 94 (101)
Q Consensus 46 ~~~~lFE~~Q~~l-----E~~vE~Ls~~le~~~~~~~~~~~k~~v~~~t~~v~~ 94 (101)
+..+.++-.++++ +...-+-.++||+.|+ .+..+..||+++-+-|..
T Consensus 22 ~~~~~~~~l~~e~~l~~~~~~~~ky~glLEKKWt--SViRLQkKImdLE~~~~~ 73 (76)
T d1uuja_ 22 GYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWT--SVIRLQKKVMELESKLNE 73 (76)
T ss_dssp TCHHHHHHHHHHTTCCCCHHHHHHHTTHHHHHHT--CHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCCCChhhhhhhcCcchhHHH--HHHHHHHHHHHHHHHHHH
Confidence 3455555555544 2233345567787774 488888899998776543
No 4
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=35.68 E-value=33 Score=20.51 Aligned_cols=47 Identities=19% Similarity=0.172 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHHHHHHHHhhh
Q psy7601 54 NQKDLESATEKLSEYLERDITSENLANIKQQVQDKYRLVKIQLKYSY 100 (101)
Q Consensus 54 ~Q~~lE~~vE~Ls~~le~~~~~~~~~~~k~~v~~~t~~v~~r~~~~y 100 (101)
.+++.+.+++.+...++...+..++...-..+...-..-+.+.+++|
T Consensus 123 ~l~~~~~A~~~~~~al~l~p~n~~~~~~l~~~~~~l~~~~~~~k~~y 169 (169)
T d1ihga1 123 GLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAY 169 (169)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 55788899999999998765444443333333333333444444443
No 5
>d1g7da_ a.71.1.1 (A:) Endoplasmic reticulum protein ERP29, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=34.06 E-value=38 Score=20.30 Aligned_cols=37 Identities=8% Similarity=0.160 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHHH
Q psy7601 55 QKDLESATEKLSEYLERDITSENLANIKQQVQDKYRL 91 (101)
Q Consensus 55 Q~~lE~~vE~Ls~~le~~~~~~~~~~~k~~v~~~t~~ 91 (101)
.+-+++.+++|..+++..+++....++..++--+.+.
T Consensus 60 ~~~~~~E~~RL~~il~g~vs~~K~del~~r~NIL~sF 96 (106)
T d1g7da_ 60 EDFPASELARISKLIENKMSEGKKEELQRSLNILTAF 96 (106)
T ss_dssp THHHHHHHHHHHHHHHSCCCTTTHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 4567888999999999889888888887777666554
No 6
>d2c0ga1 a.71.1.1 (A:1146-1251) Windbeutel, C-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=32.73 E-value=37 Score=20.43 Aligned_cols=35 Identities=14% Similarity=0.106 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHhhcCChhhHHHHHHHHHHHHH
Q psy7601 56 KDLESATEKLSEYLERDITSENLANIKQQVQDKYR 90 (101)
Q Consensus 56 ~~lE~~vE~Ls~~le~~~~~~~~~~~k~~v~~~t~ 90 (101)
+-+.+.+++|..+++..++++...++..++--|++
T Consensus 62 ~fv~~E~~RL~~ll~g~~s~~K~del~~r~NIL~~ 96 (106)
T d2c0ga1 62 DFLEEETKRLLRLKAGKVTEAKKEELLRKLNILEV 96 (106)
T ss_dssp HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 45788899999999888888777777666554443
No 7
>d1q44a_ c.37.1.5 (A:) Putative steroid sulfotransferase rarO47 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=28.22 E-value=30 Score=23.87 Aligned_cols=68 Identities=21% Similarity=0.476 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhHhh--hhhhhhhcccc--CCCCc---hhHHHHHHHHHHHHHHHHHHHhhcC-ChhhHHHHHHHHHHHH
Q psy7601 18 LKKAVDILCQCRQTL--MYTYVFAYYLR--KNNQS---VLFEDNQKDLESATEKLSEYLERDI-TSENLANIKQQVQDKY 89 (101)
Q Consensus 18 l~~A~~~L~~cRrvL--kwSY~faYyl~--~~~~~---~lFE~~Q~~lE~~vE~Ls~~le~~~-~~~~~~~~k~~v~~~t 89 (101)
+.++++...+..... -|..+.+|... +.+.. -=+|++.+|.+..+.+|.+.+..+. +++.+ ++|+++|
T Consensus 183 ~~~~~~~f~~~~~~~g~~~~h~~~~w~~~~~~p~~vL~lrYEDL~~Dp~~~vkkIa~FLg~~~~~~e~v----~~iv~~~ 258 (320)
T d1q44a_ 183 IEKAVEAFCEGKFIGGPFWDHILEYWYASRENPNKVLFVTYEELKKQTEVEMKRIAEFLECGFIEEEEV----REIVKLC 258 (320)
T ss_dssp HHHHHHHHHHTCSTTCCHHHHHHHHHHHHHHCTTTEEEEEHHHHHHTHHHHHHHHHHHHCSSCCCHHHH----HHHHHHH
T ss_pred HHHHHHHhcccccccCchhhhhHHHHHHhccCCCceEEEeehhhhhchHHHHHHHHhhcccccchHHHH----HHHHHHC
Confidence 344555444443332 36677777632 11222 2389999999999999999999884 44433 4455544
No 8
>d3bfxa1 c.37.1.5 (A:12-296) Sulfotransferase Sult1c2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.14 E-value=27 Score=23.55 Aligned_cols=28 Identities=18% Similarity=0.461 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCChhhH
Q psy7601 51 FEDNQKDLESATEKLSEYLERDITSENL 78 (101)
Q Consensus 51 FE~~Q~~lE~~vE~Ls~~le~~~~~~~~ 78 (101)
+|++..+.+..+.++...|..+++++.+
T Consensus 183 YEdL~~d~~~~v~kI~~FLg~~~~~~~i 210 (285)
T d3bfxa1 183 YEDIKRDPKHEIRKVMQFMGKKVDETVL 210 (285)
T ss_dssp HHHHHHCHHHHHHHHHHHTTCCCCHHHH
T ss_pred HhHHhhhHHHHHHHHHHhhcccccHHHH
Confidence 9999999999999999999999876554
No 9
>d1ls6a_ c.37.1.5 (A:) Aryl sulfotransferase sult1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.09 E-value=31 Score=23.26 Aligned_cols=30 Identities=17% Similarity=0.483 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCChhhH
Q psy7601 49 VLFEDNQKDLESATEKLSEYLERDITSENL 78 (101)
Q Consensus 49 ~lFE~~Q~~lE~~vE~Ls~~le~~~~~~~~ 78 (101)
-=+|++..|.+..+.++.+.|..+++++.+
T Consensus 184 irYEDL~~d~~~~v~kI~~FLg~~~~~~~i 213 (288)
T d1ls6a_ 184 LFYEDMKENPKREIQKILEFVGHSLPEETV 213 (288)
T ss_dssp EEHHHHHHCHHHHHHHHHHHHTCCCCHHHH
T ss_pred hhHHHHHhCHHHHHHHHHHHHhhhccchHH
Confidence 459999999999999999999999877655
No 10
>d1ov9a_ a.155.1.1 (A:) H-NS-like protein VicH {Vibrio cholerae [TaxId: 666]}
Probab=27.82 E-value=24 Score=18.58 Aligned_cols=16 Identities=31% Similarity=0.524 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHhh
Q psy7601 56 KDLESATEKLSEYLER 71 (101)
Q Consensus 56 ~~lE~~vE~Ls~~le~ 71 (101)
+|||.++|+|+..++.
T Consensus 22 EQLee~LeKl~~vV~e 37 (45)
T d1ov9a_ 22 EQLEEALDKLTTVVQE 37 (45)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5778888888877754
No 11
>d1g3ma_ c.37.1.5 (A:) Estrogen sulfotransferase (STE, sult1e1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.02 E-value=31 Score=23.28 Aligned_cols=31 Identities=29% Similarity=0.507 Sum_probs=27.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCChhhHH
Q psy7601 49 VLFEDNQKDLESATEKLSEYLERDITSENLA 79 (101)
Q Consensus 49 ~lFE~~Q~~lE~~vE~Ls~~le~~~~~~~~~ 79 (101)
-=+|++..+.+..+.++.+.|+.+++++.+.
T Consensus 188 v~YEdL~~d~~~~l~kI~~FLg~~~~~~~i~ 218 (290)
T d1g3ma_ 188 LFYEDLKEDIRKEVIKLIHFLERKPSEELVD 218 (290)
T ss_dssp EEHHHHHHCHHHHHHHHHHHTTCCCCHHHHH
T ss_pred eEehhhhhChHHHHHHHHHHhccccchhHHH
Confidence 5579999999999999999999998776654
No 12
>d1j99a_ c.37.1.5 (A:) Hydroxysteroid sulfotransferase sult2a1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.43 E-value=40 Score=22.56 Aligned_cols=32 Identities=22% Similarity=0.471 Sum_probs=27.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCChhhHH
Q psy7601 48 SVLFEDNQKDLESATEKLSEYLERDITSENLA 79 (101)
Q Consensus 48 ~~lFE~~Q~~lE~~vE~Ls~~le~~~~~~~~~ 79 (101)
--=+|++..+.+..+.++...|..+++++.+.
T Consensus 180 ~v~YEDL~~d~~~~v~ki~~FLg~~~~~~~i~ 211 (284)
T d1j99a_ 180 LLSYEELKQDTGRTIEKICQFLGKTLEPEELN 211 (284)
T ss_dssp EEEHHHHHHCHHHHHHHHHHHHTCCCCHHHHH
T ss_pred eeehhHhhhchHHHHHHHhhccccccchHHHH
Confidence 45689999999999999999999998776553
No 13
>d1q20a_ c.37.1.5 (A:) Cholesterol sulfotransferase sult2b1b {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.80 E-value=42 Score=22.25 Aligned_cols=29 Identities=31% Similarity=0.610 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCChhhH
Q psy7601 50 LFEDNQKDLESATEKLSEYLERDITSENL 78 (101)
Q Consensus 50 lFE~~Q~~lE~~vE~Ls~~le~~~~~~~~ 78 (101)
=+|++..+.+..+.++...+..+++++.+
T Consensus 192 ~YEdL~~d~~~~v~ki~~FLg~~~~~~~i 220 (294)
T d1q20a_ 192 TYEELQQDLQGSVERICGFLGRPLGKEAL 220 (294)
T ss_dssp EHHHHHHCHHHHHHHHHHHHTCCCCHHHH
T ss_pred ehHHhhccHHHHHHHHHHHhcccccchhh
Confidence 39999999999999999999988876544
No 14
>d1fmja_ c.37.1.5 (A:) Retinol dehydratase {Fall armyworm (Spodoptera frugiperda) [TaxId: 7108]}
Probab=23.01 E-value=30 Score=23.61 Aligned_cols=31 Identities=23% Similarity=0.625 Sum_probs=27.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCChhhHH
Q psy7601 49 VLFEDNQKDLESATEKLSEYLERDITSENLA 79 (101)
Q Consensus 49 ~lFE~~Q~~lE~~vE~Ls~~le~~~~~~~~~ 79 (101)
--+|++..+.+..+.++.+.+..+++++.+.
T Consensus 239 l~YEDl~~d~~~~i~ki~~FL~~~~~~~~i~ 269 (342)
T d1fmja_ 239 LFYEDYLKDLPGCIARIADFLGKKLSEEQIQ 269 (342)
T ss_dssp EEHHHHHHCHHHHHHHHHHHTTCCCCHHHHH
T ss_pred eehhHhhcchHHHHHHHHHHhhhhhhhHHHH
Confidence 4499999999999999999999998776553
Done!