BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7602
(95 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B1H1E4|ARI1_XENTR E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis GN=arih1
PE=2 SV=1
Length = 529
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 54/84 (64%), Gaps = 8/84 (9%)
Query: 2 PSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGKPIEFDV--- 58
P++ TGLEC H+FC QCW EYLTTKII+EGMGQTI+C AHGC+ILVDD +
Sbjct: 166 PNSYFTGLECGHKFCMQCWSEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSK 225
Query: 59 ----YQGILSNQVTNC-RLASLVP 77
YQ +++N C RL P
Sbjct: 226 VKLKYQHLITNSFVECNRLLKWCP 249
>sp|Q32NS4|ARI1_XENLA E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis GN=arih1 PE=2
SV=1
Length = 529
Score = 90.9 bits (224), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 54/84 (64%), Gaps = 8/84 (9%)
Query: 2 PSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGKPIEFDV--- 58
P++ TGLEC H+FC QCW EYLTTKII+EGMGQTI+C AHGC+ILVDD +
Sbjct: 166 PNSYFTGLECGHKFCMQCWGEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSK 225
Query: 59 ----YQGILSNQVTNC-RLASLVP 77
YQ +++N C RL P
Sbjct: 226 VKLKYQHLITNSFVECNRLLKWCP 249
>sp|Q9Z1K5|ARI1_MOUSE E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus GN=Arih1 PE=2
SV=3
Length = 555
Score = 90.1 bits (222), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 54/84 (64%), Gaps = 8/84 (9%)
Query: 2 PSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGKPIEFDV--- 58
P++ TGLEC H+FC QCW EYLTTKI++EGMGQTI+C AHGC+ILVDD +
Sbjct: 192 PNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSK 251
Query: 59 ----YQGILSNQVTNC-RLASLVP 77
YQ +++N C RL P
Sbjct: 252 VKLKYQHLITNSFVECNRLLKWCP 275
>sp|A2VEA3|ARI1_BOVIN E3 ubiquitin-protein ligase ARIH1 OS=Bos taurus GN=ARIH1 PE=2 SV=1
Length = 555
Score = 90.1 bits (222), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 54/84 (64%), Gaps = 8/84 (9%)
Query: 2 PSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGKPIEFDV--- 58
P++ TGLEC H+FC QCW EYLTTKI++EGMGQTI+C AHGC+ILVDD +
Sbjct: 192 PNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSK 251
Query: 59 ----YQGILSNQVTNC-RLASLVP 77
YQ +++N C RL P
Sbjct: 252 VKLKYQHLITNSFVECNRLLKWCP 275
>sp|Q9Y4X5|ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1
SV=2
Length = 557
Score = 90.1 bits (222), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 54/84 (64%), Gaps = 8/84 (9%)
Query: 2 PSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGKPIEFDV--- 58
P++ TGLEC H+FC QCW EYLTTKI++EGMGQTI+C AHGC+ILVDD +
Sbjct: 194 PNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSK 253
Query: 59 ----YQGILSNQVTNC-RLASLVP 77
YQ +++N C RL P
Sbjct: 254 VKLKYQHLITNSFVECNRLLKWCP 277
>sp|Q6NW85|ARI1L_DANRE E3 ubiquitin-protein ligase arih1l OS=Danio rerio GN=arih1l PE=2
SV=1
Length = 533
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
Query: 2 PSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGKPIEFDV--- 58
P++ TGLEC H+FC QCW +YLTTKII+EGMGQTI+C AH C+ILVDD +
Sbjct: 170 PNSYFTGLECGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHNCDILVDDNTVMRLITDSK 229
Query: 59 ----YQGILSNQVTNC-RLASLVP 77
YQ +++N C RL P
Sbjct: 230 VKLKYQHLITNSFVECNRLLKWCP 253
>sp|Q6PFJ9|ARI1_DANRE E3 ubiquitin-protein ligase arih1 OS=Danio rerio GN=arih1 PE=2 SV=1
Length = 527
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
Query: 2 PSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGKPIEFDV--- 58
P++ TGLEC H+FC QCW +YLTTKII+EGMGQTI+C AH C+ILVDD +
Sbjct: 164 PNSYFTGLECGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSK 223
Query: 59 ----YQGILSNQVTNC-RLASLVP 77
YQ +++N C RL P
Sbjct: 224 VKLKYQHLITNSFVECNRLLKWCP 247
>sp|Q94981|ARI1_DROME Protein ariadne-1 OS=Drosophila melanogaster GN=ari-1 PE=1 SV=2
Length = 503
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/50 (70%), Positives = 41/50 (82%)
Query: 1 MPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDD 50
+P M GLEC HRFC CW EYL+TKI+ EG+GQTI+CAAHGC+ILVDD
Sbjct: 140 LPPDSMAGLECGHRFCMPCWHEYLSTKIVAEGLGQTISCAAHGCDILVDD 189
>sp|Q9LVX0|ARI3_ARATH Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana
GN=ARI3 PE=2 SV=1
Length = 537
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 1 MPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDD 50
+PS +MT +EC HRFC CW + T K I EG + I C AH C + D+
Sbjct: 129 LPSNVMTRMECGHRFCNDCWIGHFTVK-INEGESKRILCMAHECKAICDE 177
>sp|Q9LVW9|ARI4_ARATH Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana
GN=ARI4 PE=5 SV=2
Length = 529
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 6 MTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGKPI 54
MT +EC HRFC CW E+ T + I EG G+ I C A+ CN + D+ + +
Sbjct: 132 MTRMECGHRFCNDCWKEHFTVR-INEGEGKRIRCMAYKCNTICDEARQL 179
>sp|Q949V6|ARI1_ARATH Probable E3 ubiquitin-protein ligase ARI1 OS=Arabidopsis thaliana
GN=ARI1 PE=2 SV=1
Length = 597
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 1 MPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDD 50
+P MT ++C H FC CW E+ T + I EG + I C AH CN + D+
Sbjct: 130 LPGDHMTRMDCGHCFCNNCWTEHFTVQ-INEGQSKRIRCMAHQCNAICDE 178
>sp|Q84RR2|ARI2_ARATH Probable E3 ubiquitin-protein ligase ARI2 OS=Arabidopsis thaliana
GN=ARI2 PE=2 SV=1
Length = 593
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 1 MPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDD 50
+P +T ++C H FC CW + T K I EG + I C AH CN + D+
Sbjct: 131 VPGYQLTRMDCGHSFCNNCWTGHFTVK-INEGQSKRIICMAHKCNAICDE 179
>sp|O76924|ARI2_DROME Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=2 SV=1
Length = 509
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 8 GLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDG-------KPIEFDVYQ 60
L C H FC CW Y T+I Q G+ I C A CN+ V + +P+ D YQ
Sbjct: 167 SLACGHSFCKDCWTIYFETQIFQ-GISTQIGCMAQMCNVRVPEDLVLTLVTRPVMRDKYQ 225
>sp|Q1L8G6|AKIB1_DANRE Ankyrin repeat and IBR domain-containing protein 1 OS=Danio rerio
GN=ankib1 PE=3 SV=1
Length = 1060
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 9 LECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGKPIEFDVYQGILSNQV 67
+ C H FC CW +L K IQEG I C A+ C LV P+E V + ++S ++
Sbjct: 350 MSCGHEFCRACWEGFLNLK-IQEGEAHNIFCPAYDCFQLV----PVE--VIESVVSREM 401
>sp|Q9P2G1|AKIB1_HUMAN Ankyrin repeat and IBR domain-containing protein 1 OS=Homo sapiens
GN=ANKIB1 PE=1 SV=3
Length = 1089
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 9 LECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGKPIEFDVYQGILSNQV 67
+ C H FC CW +L K IQEG I C A+ C LV P+ D+ + ++S ++
Sbjct: 349 MPCGHDFCRGCWESFLNLK-IQEGEAHNIFCPAYDCFQLV----PV--DIIESVVSKEM 400
>sp|Q6ZPS6|AKIB1_MOUSE Ankyrin repeat and IBR domain-containing protein 1 OS=Mus musculus
GN=Ankib1 PE=1 SV=2
Length = 1085
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 9 LECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGKPIEFDVYQGILSNQV 67
+ C H FC CW +L K IQEG I C A+ C LV P+ DV + ++S ++
Sbjct: 350 MPCGHDFCRGCWEAFLNLK-IQEGEAHNIFCPAYECFQLV----PV--DVIESVVSKEM 401
>sp|Q9Z1K6|ARI2_MOUSE E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus GN=Arih2 PE=2
SV=1
Length = 492
Score = 36.2 bits (82), Expect = 0.053, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 6 MTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGC 44
+ L C H+FC CW ++ + ++++G+G I+C A C
Sbjct: 150 LLSLACQHQFCRSCWEQHCSV-LVKDGVGVGISCMAQDC 187
>sp|O95376|ARI2_HUMAN E3 ubiquitin-protein ligase ARIH2 OS=Homo sapiens GN=ARIH2 PE=1
SV=1
Length = 493
Score = 35.8 bits (81), Expect = 0.079, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 6 MTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGC 44
+ L C H+FC CW ++ + ++++G+G ++C A C
Sbjct: 151 LLSLACQHQFCRSCWEQHCSV-LVKDGVGVGVSCMAQDC 188
>sp|Q6T486|RBRA_DICDI Probable E3 ubiquitin-protein ligase rbrA OS=Dictyostelium
discoideum GN=rbrA PE=3 SV=1
Length = 520
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 2 PSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGKPIEFDVYQG 61
P T L C+HR+C C+ YL K+ + C A C ++V D ++
Sbjct: 147 PPTQTFALICNHRYCLPCYKNYLEIKVSEGPECIYTPCPAPKCKVIVHQ------DAFKQ 200
Query: 62 ILSNQV 67
I+S +V
Sbjct: 201 IVSPEV 206
>sp|Q9SKC3|ARI9_ARATH Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana
GN=ARI9 PE=2 SV=1
Length = 543
Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 9 LECSHRFCTQCWCEYLTTKIIQEGMG-QTIACAAHGCNILVDDGKPIEFDVYQGILSNQV 67
+ C H +C CW Y+TTK I++G G + C C+ V GK + DV + ++ +
Sbjct: 143 VSCGHPYCKTCWAGYITTK-IEDGPGCLRVKCPEPSCSAAV--GKDMIEDVTETKVNEKY 199
Query: 68 TNCRLASLV 76
+ L S V
Sbjct: 200 SRYILRSYV 208
>sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2
Length = 2517
Score = 32.3 bits (72), Expect = 0.80, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 6 MTGLECSHRFCTQCWCEYLTTKIIQ 30
+ L C H C CW EYLTT+I Q
Sbjct: 2083 LPSLCCMHYCCKSCWNEYLTTRIEQ 2107
>sp|Q84RR0|ARI7_ARATH Probable E3 ubiquitin-protein ligase ARI7 OS=Arabidopsis thaliana
GN=ARI7 PE=2 SV=1
Length = 562
Score = 32.3 bits (72), Expect = 0.81, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 2 PSTLMTGLECSHRFCTQCWCEYLTTKI 28
P + + C H FCT CW Y++T I
Sbjct: 145 PPEKIASVSCGHPFCTTCWTGYISTTI 171
>sp|Q9C5A4|ARI16_ARATH Probable E3 ubiquitin-protein ligase ARI16 OS=Arabidopsis thaliana
GN=ARI16 PE=2 SV=1
Length = 500
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 11 CSHRFCTQCWCEYLTTKIIQEGMGQ-TIACAAHGC------NILVDDGKPIEFDVYQGIL 63
CSH+F T CW EYL+ + + + I+C + C + + +P++ ++Y+ +
Sbjct: 96 CSHKFSTTCWSEYLSDALKKNKEQRGLISCLSQDCVASVGPDTIEQLTEPVK-EMYENYI 154
Query: 64 SNQVTNCRLASLVPCKCS 81
C A++ C S
Sbjct: 155 LESFMECHKATIKWCPAS 172
>sp|Q22431|ARI2_CAEEL Probable protein ariadne-2 OS=Caenorhabditis elegans GN=T12E12.1
PE=3 SV=2
Length = 482
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 4 TLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGKPIEF 56
T + L C H FC CW ++ ++ + EG+ I C C + P EF
Sbjct: 138 TELPHLTCGHCFCEHCWKSHVESR-LSEGVASRIECMESECEVYA----PSEF 185
>sp|Q9SKC4|ARI10_ARATH Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana
GN=ARI10 PE=2 SV=1
Length = 514
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 6 MTGLECSHRFCTQCWCEYLTTKIIQEGMG-QTIACAAHGCNILV 48
+ + C H +C CW Y+TTK I++G G + C C +V
Sbjct: 133 IASVSCGHPYCKTCWTGYITTK-IEDGPGCLRVKCPEPSCYAVV 175
>sp|Q9SKC2|ARI11_ARATH Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana
GN=ARI11 PE=2 SV=1
Length = 542
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 9 LECSHRFCTQCWCEYLTTKIIQEGMG-QTIACAAHGCNILV 48
+ C H +C CW Y+TTK I++G G + C C +V
Sbjct: 154 VSCGHPYCKTCWTGYITTK-IEDGPGCLRVKCPEPSCYAVV 193
>sp|Q84RQ9|ARI12_ARATH Probable E3 ubiquitin-protein ligase ARI12 OS=Arabidopsis thaliana
GN=ARI12 PE=2 SV=2
Length = 496
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 2 PSTLMTGLECSHRFCTQCWCEYLTTKIIQE 31
P + + C HR CT+CW ++ KII E
Sbjct: 122 PHKNLASVSCGHRICTRCWTSHI-NKIISE 150
>sp|Q84RQ8|ARI15_ARATH Probable E3 ubiquitin-protein ligase ARI15 OS=Arabidopsis
thaliana GN=ARI15 PE=2 SV=1
Length = 452
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 11 CSHRFCTQCWCEYLTTKIIQEGMGQT-IACAAHGCNILV 48
CSH+FC CW +YL T I+C C V
Sbjct: 54 CSHKFCKACWSKYLKKNFFSVEKNHTAISCPDRDCRAAV 92
>sp|Q9P3U4|YKX2_SCHPO Uncharacterized RING finger protein C328.02 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC328.02 PE=3 SV=1
Length = 504
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 10 ECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILV 48
EC H FC C+ +YL ++ I EG I C C +V
Sbjct: 146 ECDHEFCLACYRQYLDSR-ISEGE-SVIQCPEESCTQIV 182
>sp|Q9KV16|QUEG_VIBCH Epoxyqueuosine reductase OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=queG PE=3 SV=1
Length = 369
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 16 CTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGKPIEFDVYQGILSNQVTNCRLASL 75
CT C T I+ EG+ C ++ I P+EF G N++ C L
Sbjct: 192 CTACITSCPTNAIVAEGVVDARRCVSY-LTIEYSGVIPLEFRRAMG---NRIYGCDDCQL 247
Query: 76 VPCKCSWVRFPP 87
V C W RF P
Sbjct: 248 V---CPWNRFAP 256
>sp|Q54YL3|INT11_DICDI Integrator complex subunit 11 homolog OS=Dictyostelium discoideum
GN=ints11 PE=3 SV=1
Length = 744
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 23 YLTTKIIQEGMGQTIACAAHGCNILVDDGKPIEFDVYQGILSNQVTN 69
+L+ KII+E MG A+G I++D K I D+ +L Q+ +
Sbjct: 433 FLSQKIIKE-MGVNCYYPANGVTIIIDTMKSIPIDISLNLLKRQILD 478
>sp|Q8L829|ARI5_ARATH Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana
GN=ARI5 PE=2 SV=1
Length = 552
Score = 29.6 bits (65), Expect = 6.2, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 6 MTGLECSHRFCTQCWCEYLTTKI 28
+ + C H FC CW Y++T I
Sbjct: 144 IVSVSCGHPFCATCWTGYISTTI 166
>sp|Q8W468|ARI8_ARATH Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana
GN=ARI8 PE=2 SV=1
Length = 567
Score = 29.3 bits (64), Expect = 6.7, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 16/38 (42%)
Query: 11 CSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILV 48
C H FC CW Y+TT I T+ C C V
Sbjct: 145 CGHPFCDSCWEGYITTAINDGPGCLTLRCPDPSCRAAV 182
>sp|Q8FD18|AROE_ECOL6 Shikimate dehydrogenase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=aroE PE=3 SV=1
Length = 272
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 2 PSTLMTGLECSHRFCTQ------CWCEYLTTKIIQEGMGQTIACAAH 42
PS + G+ C F + WCE +K +G+G +A AAH
Sbjct: 201 PSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRTADGLGMLVAQAAH 247
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.140 0.485
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,329,053
Number of Sequences: 539616
Number of extensions: 1358788
Number of successful extensions: 4270
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 4215
Number of HSP's gapped (non-prelim): 56
length of query: 95
length of database: 191,569,459
effective HSP length: 65
effective length of query: 30
effective length of database: 156,494,419
effective search space: 4694832570
effective search space used: 4694832570
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)