BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7604
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B1H1E4|ARI1_XENTR E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis GN=arih1
PE=2 SV=1
Length = 529
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 96/123 (78%), Gaps = 5/123 (4%)
Query: 1 MERYYDGDQEQLFAEARVINPLVKNSQPSTSSKSK-----CEICFTNMPSTLMTGLECSH 55
MERY+DG+ E+LF+E VINP K+ +++S C+IC+ N P++ TGLEC H
Sbjct: 118 MERYFDGNLEKLFSECHVINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGLECGH 177
Query: 56 RFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNS 115
+FC QCW EYLTTKII+EGMGQTI+C AHGC+ILVDD TVMRL+ D KVKLKYQHLITNS
Sbjct: 178 KFCMQCWSEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNS 237
Query: 116 FVE 118
FVE
Sbjct: 238 FVE 240
>sp|Q9Z1K5|ARI1_MOUSE E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus GN=Arih1 PE=2
SV=3
Length = 555
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 96/123 (78%), Gaps = 5/123 (4%)
Query: 1 MERYYDGDQEQLFAEARVINPLVKNSQPSTSSKSK-----CEICFTNMPSTLMTGLECSH 55
MERY+DG+ E+LFAE VINP K+ +++S C+IC+ N P++ TGLEC H
Sbjct: 144 MERYFDGNLEKLFAECHVINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGLECGH 203
Query: 56 RFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNS 115
+FC QCW EYLTTKI++EGMGQTI+C AHGC+ILVDD TVMRL+ D KVKLKYQHLITNS
Sbjct: 204 KFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNS 263
Query: 116 FVE 118
FVE
Sbjct: 264 FVE 266
>sp|A2VEA3|ARI1_BOVIN E3 ubiquitin-protein ligase ARIH1 OS=Bos taurus GN=ARIH1 PE=2 SV=1
Length = 555
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 96/123 (78%), Gaps = 5/123 (4%)
Query: 1 MERYYDGDQEQLFAEARVINPLVKNSQPSTSSKSK-----CEICFTNMPSTLMTGLECSH 55
MERY+DG+ E+LFAE VINP K+ +++S C+IC+ N P++ TGLEC H
Sbjct: 144 MERYFDGNLEKLFAECHVINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGLECGH 203
Query: 56 RFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNS 115
+FC QCW EYLTTKI++EGMGQTI+C AHGC+ILVDD TVMRL+ D KVKLKYQHLITNS
Sbjct: 204 KFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNS 263
Query: 116 FVE 118
FVE
Sbjct: 264 FVE 266
>sp|Q9Y4X5|ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1
SV=2
Length = 557
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 96/123 (78%), Gaps = 5/123 (4%)
Query: 1 MERYYDGDQEQLFAEARVINPLVKNSQPSTSSKSK-----CEICFTNMPSTLMTGLECSH 55
MERY+DG+ E+LFAE VINP K+ +++S C+IC+ N P++ TGLEC H
Sbjct: 146 MERYFDGNLEKLFAECHVINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGLECGH 205
Query: 56 RFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNS 115
+FC QCW EYLTTKI++EGMGQTI+C AHGC+ILVDD TVMRL+ D KVKLKYQHLITNS
Sbjct: 206 KFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNS 265
Query: 116 FVE 118
FVE
Sbjct: 266 FVE 268
>sp|Q32NS4|ARI1_XENLA E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis GN=arih1 PE=2
SV=1
Length = 529
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 79/123 (64%), Positives = 96/123 (78%), Gaps = 5/123 (4%)
Query: 1 MERYYDGDQEQLFAEARVINPLVKNSQPSTSSKSK-----CEICFTNMPSTLMTGLECSH 55
MERY+DG+ E+LF+E VINP K+ +++S C+IC+ N P++ TGLEC H
Sbjct: 118 MERYFDGNLEKLFSECHVINPSKKSRTRQMNTRSSALDMPCQICYLNYPNSYFTGLECGH 177
Query: 56 RFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNS 115
+FC QCW EYLTTKII+EGMGQTI+C AHGC+ILVDD TVMRL+ D KVKLKYQHLITNS
Sbjct: 178 KFCMQCWGEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNS 237
Query: 116 FVE 118
FVE
Sbjct: 238 FVE 240
>sp|Q6NW85|ARI1L_DANRE E3 ubiquitin-protein ligase arih1l OS=Danio rerio GN=arih1l PE=2
SV=1
Length = 533
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/123 (65%), Positives = 98/123 (79%), Gaps = 5/123 (4%)
Query: 1 MERYYDGDQEQLFAEARVINPLVK-NSQP-STSSKSK---CEICFTNMPSTLMTGLECSH 55
MERY+DG+ ++LF+E VINP K ++P ST S S+ C+IC+ N P++ TGLEC H
Sbjct: 122 MERYFDGNLDKLFSECHVINPSKKPKTRPMSTRSSSQDLPCQICYLNYPNSYFTGLECGH 181
Query: 56 RFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNS 115
+FC QCW +YLTTKII+EGMGQTI+C AH C+ILVDD TVMRL+ D KVKLKYQHLITNS
Sbjct: 182 KFCMQCWGDYLTTKIIEEGMGQTISCPAHNCDILVDDNTVMRLITDSKVKLKYQHLITNS 241
Query: 116 FVE 118
FVE
Sbjct: 242 FVE 244
>sp|Q6PFJ9|ARI1_DANRE E3 ubiquitin-protein ligase arih1 OS=Danio rerio GN=arih1 PE=2 SV=1
Length = 527
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 76/123 (61%), Positives = 95/123 (77%), Gaps = 5/123 (4%)
Query: 1 MERYYDGDQEQLFAEARVINPLVKN-----SQPSTSSKSKCEICFTNMPSTLMTGLECSH 55
MERY+DG+ ++LF+E VINP K+ + S++ C+IC+ N P++ TGLEC H
Sbjct: 116 MERYFDGNLDKLFSECHVINPSKKSRTRLMNTRSSAQDMPCQICYLNYPNSYFTGLECGH 175
Query: 56 RFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNS 115
+FC QCW +YLTTKII+EGMGQTI+C AH C+ILVDD TVMRL+ D KVKLKYQHLITNS
Sbjct: 176 KFCMQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLITNS 235
Query: 116 FVE 118
FVE
Sbjct: 236 FVE 238
>sp|Q94981|ARI1_DROME Protein ariadne-1 OS=Drosophila melanogaster GN=ari-1 PE=1 SV=2
Length = 503
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 86/122 (70%), Gaps = 4/122 (3%)
Query: 1 MERYYDGDQEQLFAEARVINPL----VKNSQPSTSSKSKCEICFTNMPSTLMTGLECSHR 56
+E+Y+D + ++ F A VINP + S S +CEICF+ +P M GLEC HR
Sbjct: 94 LEKYFDDNTDEFFKCAHVINPFNATEAIKQKTSRSQCEECEICFSQLPPDSMAGLECGHR 153
Query: 57 FCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNSF 116
FC CW EYL+TKI+ EG+GQTI+CAAHGC+ILVDD TV LV D +V++KYQ LITNSF
Sbjct: 154 FCMPCWHEYLSTKIVAEGLGQTISCAAHGCDILVDDVTVANLVTDARVRVKYQQLITNSF 213
Query: 117 VE 118
VE
Sbjct: 214 VE 215
>sp|Q9LVX0|ARI3_ARATH Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana
GN=ARI3 PE=2 SV=1
Length = 537
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 30 TSSKS-KCEICF-TNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCN 87
TS K+ KC++C ++PS +MT +EC HRFC CW + T K I EG + I C AH C
Sbjct: 114 TSKKTMKCDVCMEDDLPSNVMTRMECGHRFCNDCWIGHFTVK-INEGESKRILCMAHECK 172
Query: 88 ILVDDGTVMRLVRDPKVKLKYQHLITNSFVE 118
+ D+ V +LV P++ +Y + S+VE
Sbjct: 173 AICDEDVVRKLV-SPELADRYDRFLIESYVE 202
>sp|Q949V6|ARI1_ARATH Probable E3 ubiquitin-protein ligase ARI1 OS=Arabidopsis thaliana
GN=ARI1 PE=2 SV=1
Length = 597
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 4 YYDGDQEQLFAEA--RVINPLVKNSQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCTQC 61
+ + ++ LF+ A V + NS SS+ C++C ++P MT ++C H FC C
Sbjct: 89 FVEKGKDSLFSGAGVTVFDYQYGNSSFPQSSQMSCDVCMEDLPGDHMTRMDCGHCFCNNC 148
Query: 62 WCEYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLV--RDPKVKLKYQHLITNSFVE 118
W E+ T + I EG + I C AH CN + D+ V LV + P + K+ + S++E
Sbjct: 149 WTEHFTVQ-INEGQSKRIRCMAHQCNAICDEDIVRSLVSKKRPDLAAKFDRYLLESYIE 206
>sp|Q9LVW9|ARI4_ARATH Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana
GN=ARI4 PE=5 SV=2
Length = 529
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 4 YYDGDQEQLFAEA--RVINPLVKNSQPSTSSKSKCEICFT-NMPSTLMTGLECSHRFCTQ 60
Y D ++ LF+ A V +P + T KC+IC ++ MT +EC HRFC
Sbjct: 91 YTDQGKDVLFSRAGLTVFDPSL------TKKTMKCDICMEEDLSKYAMTRMECGHRFCND 144
Query: 61 CWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNSFVE 118
CW E+ T + I EG G+ I C A+ CN + D+ R + ++ K+ + S+VE
Sbjct: 145 CWKEHFTVR-INEGEGKRIRCMAYKCNTICDEA---RQLVSTELAEKFDRFLIESYVE 198
>sp|Q84RR2|ARI2_ARATH Probable E3 ubiquitin-protein ligase ARI2 OS=Arabidopsis thaliana
GN=ARI2 PE=2 SV=1
Length = 593
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 38 ICFTNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMR 97
IC ++P +T ++C H FC CW + T K I EG + I C AH CN + D+ V
Sbjct: 126 ICVEDVPGYQLTRMDCGHSFCNNCWTGHFTVK-INEGQSKRIICMAHKCNAICDEDVVRA 184
Query: 98 LV--RDPKVKLKYQHLITNSFVE 118
LV P + K+ + S++E
Sbjct: 185 LVSKSQPDLAEKFDRFLLESYIE 207
>sp|O95376|ARI2_HUMAN E3 ubiquitin-protein ligase ARIH2 OS=Homo sapiens GN=ARIH2 PE=1
SV=1
Length = 493
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 2/114 (1%)
Query: 5 YDGDQEQLFAEARVINPLVKNSQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCTQCWCE 64
Y + QL EARV P P++ C +C + + L C H+FC CW +
Sbjct: 109 YKSNSAQLLVEARV-QPNPSKHVPTSHPPHHCAVCMQFVRKENLLSLACQHQFCRSCWEQ 167
Query: 65 YLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNSFVE 118
+ + ++++G+G ++C A C + + V L+ + +++ KY+ + +VE
Sbjct: 168 HCSV-LVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVE 220
>sp|Q9Z1K6|ARI2_MOUSE E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus GN=Arih2 PE=2
SV=1
Length = 492
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 5 YDGDQEQLFAEARVINPLVKNSQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCTQCWCE 64
Y + QL EARV P P+ C +C + + L C H+FC CW +
Sbjct: 108 YRSNSAQLLVEARV-QPNPSKHVPTAHPPHHCAVCMQFVRKENLLSLACQHQFCRSCWEQ 166
Query: 65 YLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNSFVE 118
+ + ++++G+G I+C A C + + V L+ + +++ KY+ + +VE
Sbjct: 167 HCSV-LVKDGVGVGISCMAQDCPLRTPEDFVFPLLPNEELRDKYRRYLFRDYVE 219
>sp|O76924|ARI2_DROME Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=2 SV=1
Length = 509
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 36 CEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGTV 95
C +C ++ L C H FC CW Y T+I Q G+ I C A CN+ V + V
Sbjct: 153 CPVCASSQLGDKFYSLACGHSFCKDCWTIYFETQIFQ-GISTQIGCMAQMCNVRVPEDLV 211
Query: 96 MRLVRDPKVKLKYQHLITNSFVE 118
+ LV P ++ KYQ +V+
Sbjct: 212 LTLVTRPVMRDKYQQFAFKDYVK 234
>sp|Q84RR0|ARI7_ARATH Probable E3 ubiquitin-protein ligase ARI7 OS=Arabidopsis thaliana
GN=ARI7 PE=2 SV=1
Length = 562
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 28 PSTSSKSKCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMG-QTIACAAHGC 86
PS S+ C ICF + P + + C H FCT CW Y++T I +G G + C C
Sbjct: 129 PSDDSELTCGICFDSYPPEKIASVSCGHPFCTTCWTGYIST-TINDGPGCLMLRCPDPSC 187
Query: 87 NILVDDGTVMRLVRDPKVKLKYQHLITNSFVE 118
V V +L + + K KY S++E
Sbjct: 188 LAAVGHDMVDKLASEDE-KEKYNRYFLRSYIE 218
>sp|Q6T486|RBRA_DICDI Probable E3 ubiquitin-protein ligase rbrA OS=Dictyostelium
discoideum GN=rbrA PE=3 SV=1
Length = 520
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 1 MERYYDGDQEQLFAEARVINPLVKNSQ-PSTSSKSKCEICFTNMPSTLMTGLECSHRFCT 59
+ERY + + E+L +A V N + N+ S C IC + P T L C+HR+C
Sbjct: 104 IERYME-NPEKLCIDAGVPNVMKLNATIVEKSGNVSCLICLEDYPPTQTFALICNHRYCL 162
Query: 60 QCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNSFVE 118
C+ YL K+ + C A C ++V ++V P+V ++ + I S+V+
Sbjct: 163 PCYKNYLEIKVSEGPECIYTPCPAPKCKVIVHQDAFKQIVS-PEVFERFNNFILKSYVD 220
>sp|Q9SKC3|ARI9_ARATH Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana
GN=ARI9 PE=2 SV=1
Length = 543
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 35 KCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMG-QTIACAAHGCNILVDDG 93
+C ICF + + + C H +C CW Y+TTK I++G G + C C+ V
Sbjct: 127 QCGICFESYTREEIARVSCGHPYCKTCWAGYITTK-IEDGPGCLRVKCPEPSCSAAV-GK 184
Query: 94 TVMRLVRDPKVKLKYQHLITNSFVE 118
++ V + KV KY I S+VE
Sbjct: 185 DMIEDVTETKVNEKYSRYILRSYVE 209
>sp|Q8W468|ARI8_ARATH Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana
GN=ARI8 PE=2 SV=1
Length = 567
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 30 TSSKSKCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMG-QTIACAAHGCNI 88
T + C ICF S + C H FC CW Y+TT I +G G T+ C C
Sbjct: 122 TDGELDCGICFETFLSDKLHAAACGHPFCDSCWEGYITT-AINDGPGCLTLRCPDPSCRA 180
Query: 89 LVDDGTVMRLVRDPKVKLKYQHLITNSFVE 118
V + L D K K KY S+VE
Sbjct: 181 AVGQDMINLLAPD-KDKQKYTSYFVRSYVE 209
>sp|Q22431|ARI2_CAEEL Probable protein ariadne-2 OS=Caenorhabditis elegans GN=T12E12.1
PE=3 SV=2
Length = 482
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
Query: 25 NSQPSTSSKSKCEIC----FTNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIA 80
+S S +K C +C +T +P L C H FC CW ++ ++ + EG+ I
Sbjct: 118 SSTQSVLAKGYCSVCAMDGYTELPH-----LTCGHCFCEHCWKSHVESR-LSEGVASRIE 171
Query: 81 CAAHGCNILVDDGTVMRLVRD-PKVKLKYQHLITNSFV 117
C C + V+ ++++ P +KLKY+ + V
Sbjct: 172 CMESECEVYAPSEFVLSIIKNSPVIKLKYERFLLRDMV 209
>sp|Q9SKC4|ARI10_ARATH Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana
GN=ARI10 PE=2 SV=1
Length = 514
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 35 KCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMG-QTIACAAHGCNILVDDG 93
+C ICF + + + C H +C CW Y+TTK I++G G + C C +V
Sbjct: 120 QCGICFESYTRKEIASVSCGHPYCKTCWTGYITTK-IEDGPGCLRVKCPEPSCYAVVGQD 178
Query: 94 TVMRLVRDPKVKLKYQHLITNSFVE 118
+ V + K K KY S+VE
Sbjct: 179 MIDE-VTEKKDKDKYYRYFLRSYVE 202
>sp|Q9SKC2|ARI11_ARATH Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana
GN=ARI11 PE=2 SV=1
Length = 542
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Query: 35 KCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMG-QTIACAAHGCNILVDDG 93
+C ICF + + + C H +C CW Y+TTK I++G G + C C +V
Sbjct: 138 QCGICFESYTRKEIARVSCGHPYCKTCWTGYITTK-IEDGPGCLRVKCPEPSCYAVVGQD 196
Query: 94 TVMRLVRDPKVKLKYQHLITNSFVE 118
+ V + K K KY S+VE
Sbjct: 197 MIDE-VTEKKDKDKYYRYFLRSYVE 220
>sp|Q9P3U4|YKX2_SCHPO Uncharacterized RING finger protein C328.02 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC328.02 PE=3 SV=1
Length = 504
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Query: 1 MERYYDGDQEQLFAEARVINPLVKNSQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCTQ 60
+ERY D +E L + + + + CEIC+ + EC H FC
Sbjct: 98 LERYIDAPEESL--QKAGVGLSGSKQREVVHHEGTCEICYDEGCLPFFSA-ECDHEFCLA 154
Query: 61 CWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNSFVE 118
C+ +YL ++ I EG I C C +V ++ +++ D K +Y L+ SFV+
Sbjct: 155 CYRQYLDSR-ISEGES-VIQCPEESCTQIVSIQSITKVL-DEKSLDRYHRLLDRSFVD 209
>sp|Q9P2G1|AKIB1_HUMAN Ankyrin repeat and IBR domain-containing protein 1 OS=Homo sapiens
GN=ANKIB1 PE=1 SV=3
Length = 1089
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 16 ARVINPLVKNSQPSTSSKSKCEICFTNMPS-TLMTGLECSHRFCTQCWCEYLTTKIIQEG 74
+ V +P + P S C+IC ++ + C H FC CW +L K IQEG
Sbjct: 313 SSVTSPDEISLSPGDLDTSLCDICMCSISVFEDPVDMPCGHDFCRGCWESFLNLK-IQEG 371
Query: 75 MGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNSFVE 118
I C A+ C LV + +V ++ +Y +FVE
Sbjct: 372 EAHNIFCPAYDCFQLVPVDIIESVVSK-EMDKRYLQFDIKAFVE 414
>sp|Q6ZPS6|AKIB1_MOUSE Ankyrin repeat and IBR domain-containing protein 1 OS=Mus musculus
GN=Ankib1 PE=1 SV=2
Length = 1085
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 18 VINPLVKNSQPSTSSKSKCEICFTNMPS-TLMTGLECSHRFCTQCWCEYLTTKIIQEGMG 76
V +P + P S C+IC ++ + C H FC CW +L K IQEG
Sbjct: 316 VTSPDEISLSPGDLDTSLCDICMCSISVFEDPVDMPCGHDFCRGCWEAFLNLK-IQEGEA 374
Query: 77 QTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNSFVE 118
I C A+ C LV + +V ++ +Y +FVE
Sbjct: 375 HNIFCPAYECFQLVPVDVIESVVSK-EMDKRYLQFDIKAFVE 415
>sp|Q9C5A4|ARI16_ARATH Probable E3 ubiquitin-protein ligase ARI16 OS=Arabidopsis thaliana
GN=ARI16 PE=2 SV=1
Length = 500
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 16/116 (13%)
Query: 7 GDQEQLFAEARVINPLVKNSQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCTQCWCEYL 66
GD ++ F A++ V NS S++ + T L++ CSH+F T CW EYL
Sbjct: 57 GDNKEKFL-AKLGLARVLNSNSSSADRE------TGDGDYLVSTPFCSHKFSTTCWSEYL 109
Query: 67 TTKII----QEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNSFVE 118
+ + Q G+ I+C + C V T+ +L VK Y++ I SF+E
Sbjct: 110 SDALKKNKEQRGL---ISCLSQDCVASVGPDTIEQLTE--PVKEMYENYILESFME 160
>sp|Q9FFN9|ARI13_ARATH Probable E3 ubiquitin-protein ligase ARI13 OS=Arabidopsis thaliana
GN=ARI13 PE=2 SV=1
Length = 536
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 8 DQEQLFAEARVINPLVKNSQPSTSSKSKCEICFT--NMPSTLMTGLECSHRFCTQCWCEY 65
+ E++ +E+ + P+V + S C ICF + L++ CSH FC CW +Y
Sbjct: 60 NNEKVLSESG-LKPVVVDPNQDLYKISSCGICFKTCDDGDYLISTPFCSHMFCKSCWRKY 118
Query: 66 LTTKIIQEGMGQT-IACAAHGCNILVDDGTVMRL-VRDPKVKLKYQHLITNSFVE 118
L QT I+C C V T+ +L V D ++ ++Y I S++E
Sbjct: 119 LEKNFYLVEKTQTRISCPHGACQAAVGPDTIQKLTVCDQEMYVEY---ILRSYIE 170
>sp|Q1L8G6|AKIB1_DANRE Ankyrin repeat and IBR domain-containing protein 1 OS=Danio rerio
GN=ankib1 PE=3 SV=1
Length = 1060
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 51 LECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQH 110
+ C H FC CW +L K IQEG I C A+ C LV + +V ++ +Y
Sbjct: 350 MSCGHEFCRACWEGFLNLK-IQEGEAHNIFCPAYDCFQLVPVEVIESVVSR-EMDKRYLQ 407
Query: 111 LITNSFVE 118
+FV+
Sbjct: 408 FDIKAFVD 415
>sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2
Length = 2517
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Query: 5 YDGDQEQLFAEARVINPLVKNSQPSTSSKSKCEICFTNMP-STLMTGLECSHRFCTQCWC 63
Y D E L A + V +Q C +C + + + L C H C CW
Sbjct: 2042 YSEDPEPLLLAAGLC---VHQAQAVPVRPDHCPVCVSPLGCDDDLPSLCCMHYCCKSCWN 2098
Query: 64 EYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNSFVE 118
EYLTT+ I++ + C C + +V P+V KY+ + +VE
Sbjct: 2099 EYLTTR-IEQNLVLNCTCPIADCPAQPTGAFIRAIVSSPEVISKYEKALLRGYVE 2152
>sp|Q8L829|ARI5_ARATH Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana
GN=ARI5 PE=2 SV=1
Length = 552
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 3/84 (3%)
Query: 36 CEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMG-QTIACAAHGCNILVDDGT 94
C ICF + + + C H FC CW Y++T I +G G + C C +
Sbjct: 132 CGICFDSYTLEEIVSVSCGHPFCATCWTGYIST-TINDGPGCLMLKCPDPSCPAAIGRDM 190
Query: 95 VMRLVRDPKVKLKYQHLITNSFVE 118
+ +L + K KY S+VE
Sbjct: 191 IDKLA-SKEDKEKYYRYFLRSYVE 213
>sp|Q9FFP1|ARI14_ARATH Probable E3 ubiquitin-protein ligase ARI14 OS=Arabidopsis thaliana
GN=ARI14 PE=2 SV=1
Length = 506
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 8 DQEQLFAEARVINPLVKNSQPSTSSKS-KCEICFTNMPSTLMTGLECSHRFCTQCWCEYL 66
++E+L ++ + + ++ S S+S S + ++ + + L++ CSH+F ++ W EYL
Sbjct: 60 NKEKLLMDSGLKSVMIDPSPDSSSEISLETDVYEFDGDNDLISMPFCSHKFDSKYWREYL 119
Query: 67 TTKIIQ-EGMGQTIACAAHGCNILVDDGTVMRL-VRDPKVKLKYQHLITNSFVE 118
E + TI+C C V T+ +L VRD ++ Y+ I S++E
Sbjct: 120 EKNFYYVEKIQTTISCPDQDCRSAVGPDTIEKLTVRDQEM---YERYIWRSYIE 170
>sp|Q9UBS8|RNF14_HUMAN E3 ubiquitin-protein ligase RNF14 OS=Homo sapiens GN=RNF14 PE=1
SV=1
Length = 474
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 36 CEICF-TNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGT 94
C ICF + S M LEC H +C C +Y + I++G Q + C C + G
Sbjct: 220 CSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQ-IRDGQVQCLNCPEPKCPSVATPGQ 278
Query: 95 VMRLVRDPKVKLKYQHLITNSFVE 118
V LV + ++ +Y L+ S ++
Sbjct: 279 VKELV-EAELFARYDRLLLQSSLD 301
>sp|P0C8K8|ARI6_ARATH Putative E3 ubiquitin-protein ligase ARI6 OS=Arabidopsis thaliana
GN=ARI6 PE=5 SV=1
Length = 552
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 36 CEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMG 76
C ICF + P + C H FC CW Y++T I +G G
Sbjct: 133 CGICFESYPLEETISVSCGHPFCATCWTGYISTS-INDGPG 172
>sp|Q84RQ8|ARI15_ARATH Probable E3 ubiquitin-protein ligase ARI15 OS=Arabidopsis thaliana
GN=ARI15 PE=2 SV=1
Length = 452
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 47 LMTGLECSHRFCTQCWCEYLTTKIIQEGMGQT-IACAAHGCNILVDDGTVMRL-VRDPKV 104
L++ CSH+FC CW +YL T I+C C V TV +L VRD +
Sbjct: 48 LISTPFCSHKFCKACWSKYLKKNFFSVEKNHTAISCPDRDCRAAVGPETVEKLTVRDQAM 107
Query: 105 KLKYQHLITNSFVE 118
Y+ I S+ E
Sbjct: 108 ---YELYILKSYRE 118
>sp|Q84RQ9|ARI12_ARATH Probable E3 ubiquitin-protein ligase ARI12 OS=Arabidopsis thaliana
GN=ARI12 PE=2 SV=2
Length = 496
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 22 LVKNSQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQE 73
L++ PS ++ C C + P + + C HR CT+CW ++ KII E
Sbjct: 100 LLELDPPSDDNEYFCGACGESHPHKNLASVSCGHRICTRCWTSHI-NKIISE 150
>sp|Q9JI90|RNF14_MOUSE E3 ubiquitin-protein ligase RNF14 OS=Mus musculus GN=Rnf14 PE=2
SV=2
Length = 485
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 36 CEICF-TNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDGT 94
C ICF + S M LEC H +C C +Y + I++G + + C C + G
Sbjct: 221 CSICFCEKLGSDCMYFLECKHVYCKACLKDYFEIQ-IKDGQVKCLNCPEPQCPSVATPGQ 279
Query: 95 VMRLVRDPKVKLKYQHLITNSFVE 118
V LV + + +Y L+ S ++
Sbjct: 280 VKELV-EADLFARYDRLLLQSTLD 302
>sp|Q54CX4|Y5521_DICDI Uncharacterized protein DDB_G0292642 OS=Dictyostelium discoideum
GN=DDB_G0292642 PE=4 SV=2
Length = 903
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 35 KCEICFTNMP-STLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDG 93
+C+IC+ S + LEC H +C C E+L +I EG I+C C + +
Sbjct: 615 ECKICYMEYDQSNEVFTLECDHVYCFDCITEHLRI-LITEGRVLDISCPHPQCKKEIKES 673
Query: 94 TVMRLVRDPKVKLKYQHL 111
+ L + K LKYQ
Sbjct: 674 EIYMLTNE-KNWLKYQKF 690
>sp|O92503|VIE2_NPVBM E3 ubiquitin-protein ligase IE2 OS=Bombyx mori nuclear polyhedrosis
virus GN=IE2 PE=1 SV=1
Length = 422
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 18/95 (18%)
Query: 36 CEICFT------NMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNIL 89
C ICFT N+ S+ +T ++C+H C +C+ +II + C+A +
Sbjct: 220 CNICFTTLKDTKNVDSSFVTSIDCNHAVCFKCYV-----RIIMDNSTYKCFCSASSSDFR 274
Query: 90 V--DDGTV----MRLVRD-PKVKLKYQHLITNSFV 117
V G V + L+R+ +K ++ L+ N+ V
Sbjct: 275 VYNKHGYVEFMPLTLIRNRDSIKQHWRELLENNTV 309
>sp|Q1L8L6|RN19B_DANRE E3 ubiquitin-protein ligase RNF19B OS=Danio rerio GN=rnf19b PE=3
SV=2
Length = 701
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 35 KCEICFTNMPSTLMTGLE-CSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNILVDDG 93
+C +C P+ + L+ CSHR C C +YL +I + + ++C C +
Sbjct: 106 ECPLCLVRQPAEQLPELQGCSHRSCLCCLRQYLRIEITESRV--QLSCPE--CAERLAPW 161
Query: 94 TVMRLVRDPKVKLKYQHLI 112
V ++ DP + KY+ +
Sbjct: 162 QVALILDDPNLMEKYEEFL 180
>sp|Q9UM82|SPAT2_HUMAN Spermatogenesis-associated protein 2 OS=Homo sapiens GN=SPATA2 PE=1
SV=2
Length = 520
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 22 LVKNSQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCTQCWCEY 65
L S+PST+ S+C C N P T +CS C C Y
Sbjct: 446 LHSKSKPSTTPTSRCGFC--NRPGATNTCTQCSKVSCDACLSAY 487
>sp|Q03266|PABC_YEAST Aminodeoxychorismate lyase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ABZ2 PE=1 SV=1
Length = 374
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 7/43 (16%)
Query: 13 FAEARV-----INPLVKNSQPSTSSKSKCEICFTNMPSTLMTG 50
+A ARV IN L + S+P TSS S+CEI F+N LM G
Sbjct: 258 YARARVRMQTAINNL-RGSEP-TSSVSQCEILFSNKSGLLMEG 298
>sp|Q80TT8|CUL9_MOUSE Cullin-9 OS=Mus musculus GN=Cul9 PE=2 SV=2
Length = 1865
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 5/115 (4%)
Query: 5 YDGDQEQLFAEARVINPLVKNSQPSTSSKSKCEICFTNM-PSTLMTGLECSHRFCTQCWC 63
Y D E L A + P +Q + +C +C T + P L C H C CW
Sbjct: 1381 YSDDPEPLLLAAGLRVP---QAQVVPTRPDQCPVCVTPLGPHDDSPSLCCLHCCCKSCWN 1437
Query: 64 EYLTTKIIQEGMGQTIACAAHGCNILVDDGTVMRLVRDPKVKLKYQHLITNSFVE 118
EYLTT+ I++ C C + +V P+V KY+ + +VE
Sbjct: 1438 EYLTTR-IEQNFVLNCTCPIADCPAQPTGAFIRNIVSSPEVISKYEKALLRGYVE 1491
>sp|Q8CEF8|RN222_MOUSE RING finger protein 222 OS=Mus musculus GN=Rnf222 PE=2 SV=2
Length = 211
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 31 SSKSKCEIC---FTNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIAC 81
SS S+C +C F ++ T L C H FC C +YL + + + +TI C
Sbjct: 9 SSGSECPVCYEKFRDLDGASRT-LSCGHVFCHDCLVKYLLSTRVDGQVQRTIVC 61
>sp|Q2FH29|Y1302_STAA3 Uncharacterized protein SAUSA300_1302 OS=Staphylococcus aureus
(strain USA300) GN=SAUSA300_1302 PE=3 SV=1
Length = 263
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
Query: 3 RYYDGDQEQLFAEARVINPLVKN---SQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCT 59
++Y +F +A+ + L KN P+ S K+K + + T M + CS T
Sbjct: 4 KHYKNSDSTVFNDAKALFDLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDT 63
Query: 60 QCWCEYLTTKIIQEGM-------GQTIACAAHGCNILVDDGTVMRLVRDPKVK--LKYQH 110
+ + T K EG G I G + +D+ + + P + L Y+
Sbjct: 64 ESLLGFKTIKTNAEGQQEIVFVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYRR 123
Query: 111 LITNSF 116
ITN +
Sbjct: 124 QITNPY 129
>sp|Q5HG10|Y1445_STAAC Uncharacterized protein SACOL1445 OS=Staphylococcus aureus (strain
COL) GN=SACOL1445 PE=3 SV=1
Length = 263
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
Query: 3 RYYDGDQEQLFAEARVINPLVKN---SQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCT 59
++Y +F +A+ + L KN P+ S K+K + + T M + CS T
Sbjct: 4 KHYKNSDSTVFNDAKALFDLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDT 63
Query: 60 QCWCEYLTTKIIQEGM-------GQTIACAAHGCNILVDDGTVMRLVRDPKVK--LKYQH 110
+ + T K EG G I G + +D+ + + P + L Y+
Sbjct: 64 ESLLGFKTIKTNAEGQQEIVFVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYRR 123
Query: 111 LITNSF 116
ITN +
Sbjct: 124 QITNPY 129
>sp|Q6GGZ9|Y1421_STAAR Uncharacterized protein SAR1421 OS=Staphylococcus aureus (strain
MRSA252) GN=SAR1421 PE=3 SV=1
Length = 263
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
Query: 3 RYYDGDQEQLFAEARVINPLVKN---SQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCT 59
++Y +F +A+ + L KN P+ S K+K + + T M + CS T
Sbjct: 4 KHYKNSDSTVFNDAKALFDLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDT 63
Query: 60 QCWCEYLTTKIIQEGM-------GQTIACAAHGCNILVDDGTVMRLVRDPKVK--LKYQH 110
+ + T K EG G I G + +D+ + + P + L Y+
Sbjct: 64 ESLLGFKTIKTNAEGQQEIVFVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYRR 123
Query: 111 LITNSF 116
ITN +
Sbjct: 124 QITNPY 129
>sp|Q2G2J8|Y1413_STAA8 Uncharacterized protein SAOUHSC_01413 OS=Staphylococcus aureus
(strain NCTC 8325) GN=SAOUHSC_01413 PE=3 SV=1
Length = 263
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
Query: 3 RYYDGDQEQLFAEARVINPLVKN---SQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCT 59
++Y +F +A+ + L KN P+ S K+K + + T M + CS T
Sbjct: 4 KHYKNSDSTVFNDAKALFDLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDT 63
Query: 60 QCWCEYLTTKIIQEGM-------GQTIACAAHGCNILVDDGTVMRLVRDPKVK--LKYQH 110
+ + T K EG G I G + +D+ + + P + L Y+
Sbjct: 64 ESLLGFKTIKTNAEGQQEIVFVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYRR 123
Query: 111 LITNSF 116
ITN +
Sbjct: 124 QITNPY 129
>sp|Q99U78|Y1409_STAAM Uncharacterized protein SAV1409 OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=SAV1409 PE=1 SV=1
Length = 263
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
Query: 3 RYYDGDQEQLFAEARVINPLVKN---SQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCT 59
++Y +F +A+ + L KN P+ S K+K + + T M + CS T
Sbjct: 4 KHYKNSDSTVFNDAKALFDLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDT 63
Query: 60 QCWCEYLTTKIIQEGM-------GQTIACAAHGCNILVDDGTVMRLVRDPKVK--LKYQH 110
+ + T K EG G I G + +D+ + + P + L Y+
Sbjct: 64 ESLLGFKTIKTNAEGQQEIVFVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYRR 123
Query: 111 LITNSF 116
ITN +
Sbjct: 124 QITNPY 129
>sp|Q6G9F2|Y1352_STAAS Uncharacterized protein SAS1352 OS=Staphylococcus aureus (strain
MSSA476) GN=SAS1352 PE=3 SV=1
Length = 263
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
Query: 3 RYYDGDQEQLFAEARVINPLVKN---SQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCT 59
++Y +F +A+ + L KN P+ S K+K + + T M + CS T
Sbjct: 4 KHYKNSDSTVFNDAKALFDLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDT 63
Query: 60 QCWCEYLTTKIIQEGM-------GQTIACAAHGCNILVDDGTVMRLVRDPKVK--LKYQH 110
+ + T K EG G I G + +D+ + + P + L Y+
Sbjct: 64 ESLLGFKTIKTNAEGQQEIVFVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYRR 123
Query: 111 LITNSF 116
ITN +
Sbjct: 124 QITNPY 129
>sp|Q7A0W8|Y1299_STAAW Uncharacterized protein MW1299 OS=Staphylococcus aureus (strain
MW2) GN=MW1299 PE=3 SV=1
Length = 263
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
Query: 3 RYYDGDQEQLFAEARVINPLVKN---SQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCT 59
++Y +F +A+ + L KN P+ S K+K + + T M + CS T
Sbjct: 4 KHYKNSDSTVFNDAKALFDLNKNILLKGPTGSGKTKLAETLSEVVDTPMHQVNCSVDLDT 63
Query: 60 QCWCEYLTTKIIQEGM-------GQTIACAAHGCNILVDDGTVMRLVRDPKVK--LKYQH 110
+ + T K EG G I G + +D+ + + P + L Y+
Sbjct: 64 ESLLGFKTIKTNAEGQQEIVFVDGPVIKAMKEGHILYIDEINMAKPETLPVLNGVLDYRR 123
Query: 111 LITNSF 116
ITN +
Sbjct: 124 QITNPY 129
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.134 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,823,488
Number of Sequences: 539616
Number of extensions: 1498370
Number of successful extensions: 4101
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 4031
Number of HSP's gapped (non-prelim): 157
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)