RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy7604
(118 letters)
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4,
UIP4, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
SCOP: g.44.1.1
Length = 94
Score = 61.8 bits (150), Expect = 5e-14
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 31 SSKSKCEICFTNMPSTLMTGL-ECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCN-- 87
S S C++C P MT + +C FCT C +Y+ I+EG+ I+C C
Sbjct: 3 SGSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELL-IKEGLETAISCPDAACPKQ 61
Query: 88 ILVDDGTVMRLVRDPKVKLKYQHLITNSFVE 118
+ + + +V ++ +Y+ L
Sbjct: 62 GHLQENEIECMV-AAEIMQRYKKLQFERSGP 91
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring,
ATP-binding, chromosomal protein, coiled coil, DNA
damage; 2.31A {Saccharomyces cerevisiae}
Length = 267
Score = 31.8 bits (71), Expect = 0.036
Identities = 14/77 (18%), Positives = 22/77 (28%), Gaps = 14/77 (18%)
Query: 35 KCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEGMGQTIACAAHGCNI------ 88
C I + + +C+H F YL T C C+
Sbjct: 183 TCPITCKPYEAP-LISRKCNHVFDRDGIQNYLQG-------YTTRDCPQAACSQVVSMRD 234
Query: 89 LVDDGTVMRLVRDPKVK 105
V D + + K+K
Sbjct: 235 FVRDPIMELRCKIAKMK 251
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid
herpesvirus 1} SCOP: g.44.1.1
Length = 68
Score = 29.3 bits (66), Expect = 0.076
Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Query: 31 SSKSKCEICFTNMPSTLMTGLECSHRFCTQC---WCE 64
+ +C IC + + M L C H FC C W
Sbjct: 3 TVAERCPICLEDPSNYSMA-LPCLHAFCYVCITRWIR 38
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding
domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 69
Score = 29.1 bits (65), Expect = 0.084
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 5/42 (11%)
Query: 25 NSQPSTSSKSKCEICFTNM-----PSTLMTGLECSHRFCTQC 61
+ S C IC L+ EC H FC+QC
Sbjct: 7 GTGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQC 48
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin
ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB:
2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A
2ldr_A*
Length = 389
Score = 30.5 bits (68), Expect = 0.10
Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Query: 9 QEQLFAEARVINPLVKNSQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTT 68
+ +V + S+ C+IC N + C H CT C + +
Sbjct: 308 EPTPQDHIKVTQEQYELYCEMGSTFQLCKICAENDKDVKIE--PCGHLMCTSCLTSWQES 365
Query: 69 K 69
+
Sbjct: 366 E 366
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase,
ubiquitylation, sumoylation, zinc-FI metal binding
protein; 1.80A {Rattus norvegicus}
Length = 71
Score = 28.3 bits (63), Expect = 0.22
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 5/42 (11%)
Query: 25 NSQPSTSSKSKCEICFTNM-----PSTLMTGLECSHRFCTQC 61
+ S C IC L+ EC H FC+QC
Sbjct: 2 TTGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQC 43
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 72
Score = 27.4 bits (61), Expect = 0.36
Identities = 10/34 (29%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 36 CEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTK 69
C IC + T EC H FC C +
Sbjct: 18 CSICKGYLIDA-TTITECLHTFCKSCIVRHFYYS 50
>1ejx_C Urease alpha subunit; alpha-beta barrel, nickel metalloenzyme,
temperature depende structural changes, hydrolase; HET:
KCX; 1.60A {Klebsiella aerogenes} SCOP: b.92.1.1
c.1.9.2 PDB: 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1ef2_A*
1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1ejr_C* 1krc_C 1krb_C*
1fwi_C* 1fwa_C* 1fwb_C* 1fwc_C* 1fwd_C* 1fwe_C* 1fwg_C*
1a5k_C ...
Length = 567
Score = 28.9 bits (64), Expect = 0.40
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 69 KIIQEGMGQTIACAAHGCNILVDDGTVMR 97
K+I++GMGQ AA ++++ + ++
Sbjct: 49 KVIRDGMGQGQMLAADCVDLVLTNALIVD 77
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1;
RCHY1, ring domain, zinc-binding domain, structural
genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Length = 55
Score = 26.8 bits (60), Expect = 0.48
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 31 SSKSKCEICFTNM--PSTLMTGLECSHRFCTQCWCEYL 66
S S C IC ++ + L C H C+ E L
Sbjct: 3 SGSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEML 40
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring
domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 81
Score = 27.1 bits (60), Expect = 0.59
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 35 KCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTK 69
+C IC + ++T +C H FC C E+
Sbjct: 17 RCFICRQAFQNPVVT--KCRHYFCESCALEHFRAT 49
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha,
coiled coil, cytoplasm, metal- binding, UBL
conjugation, UBL conjugation pathway; 2.10A {Homo
sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Length = 118
Score = 27.5 bits (61), Expect = 0.59
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
Query: 35 KCEICFTNMPSTLMTGLECSHRFCTQCWCEYL 66
+C IC + + T C HRFC C + +
Sbjct: 20 ECPICLMALREAVQT--PCGHRFCKACIIKSI 49
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative
splicing, apoptosis, cytoplasm, metal-binding, UBL
conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Length = 141
Score = 27.8 bits (61), Expect = 0.73
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 35 KCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTK 69
C C + +C HR+C+ C L++
Sbjct: 33 LCSACRNVLRRPFQA--QCGHRYCSFCLASILSSG 65
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb,
E3-ligase, nuclear protein, chromosomal protein,
transcription regulation; 2.0A {Mus musculus} PDB:
3rpg_B 2h0d_A
Length = 108
Score = 27.1 bits (60), Expect = 0.74
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 36 CEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTK 69
C +C T +EC H FC C YL T
Sbjct: 18 CVLCGGYFIDA-TTIIECLHSFCKTCIVRYLETS 50
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2,
protein structure initiative, northeast structural
genomics consortium, NESG; HET: MSE; 2.29A {Homo
sapiens}
Length = 100
Score = 27.2 bits (60), Expect = 0.76
Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 21 PLVKNSQPSTSSKSKCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTK 69
+ + S S + +C IC + + CS C C +LT +
Sbjct: 10 HMDEQSVESIAEVFRCFICMEKLRDARLC-PHCSKLCCFSCIRRWLTEQ 57
>2ecy_A TNF receptor-associated factor 3; metal binding protein,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 66
Score = 26.3 bits (58), Expect = 0.93
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 35 KCEICFTNMPSTLMTGLECSHRFCTQC 61
KCE C + S T EC HRFC C
Sbjct: 17 KCEKCHLVLCSPKQT--ECGHRFCESC 41
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT-
interacting protein, ring domain, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 88
Score = 26.6 bits (59), Expect = 1.00
Identities = 11/29 (37%), Positives = 11/29 (37%), Gaps = 4/29 (13%)
Query: 36 CEIC---FTNMPSTLMTGLECSHRFCTQC 61
C IC FT L C H C QC
Sbjct: 18 CPICMESFTEEQLRPKL-LHCGHTICRQC 45
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding;
HET: SUC; 1.50A {Homo sapiens}
Length = 64
Score = 25.5 bits (56), Expect = 1.6
Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 5/32 (15%)
Query: 35 KCEICFTNM-----PSTLMTGLECSHRFCTQC 61
C IC L+ EC H FC+QC
Sbjct: 5 SCPICMDGYSEIVQNGRLIVSTECGHVFCSQC 36
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding,
translesion synthesis, UB conjugation pathway; 1.80A
{Homo sapiens}
Length = 99
Score = 26.3 bits (58), Expect = 1.7
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 35 KCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTK 69
+C ICF ++ +CSH +C+ C ++L+ K
Sbjct: 24 RCGICFEYFNIAMII-PQCSHNYCSLCIRKFLSYK 57
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 71
Score = 25.6 bits (56), Expect = 1.9
Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 6/39 (15%)
Query: 25 NSQPSTSSKSKCEICFTNM--PSTLMTGLECSHRFCTQC 61
+ + + +C IC P +L C H FC C
Sbjct: 7 GNTAPSLTVPECAICLQTCVHPVSL----PCKHVFCYLC 41
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex,
chimera; 2.21A {Rattus norvegicus}
Length = 133
Score = 26.3 bits (57), Expect = 1.9
Identities = 12/40 (30%), Positives = 15/40 (37%), Gaps = 5/40 (12%)
Query: 35 KCEICF-----TNMPSTLMTGLECSHRFCTQCWCEYLTTK 69
C IC L+ EC H FC+QC + L
Sbjct: 9 SCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA 48
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A
{Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB:
1e9z_B* 3qga_C* 3qgk_C*
Length = 569
Score = 26.9 bits (59), Expect = 1.9
Identities = 5/28 (17%), Positives = 16/28 (57%)
Query: 69 KIIQEGMGQTIACAAHGCNILVDDGTVM 96
K ++EGM Q+ + ++++ + ++
Sbjct: 49 KTLREGMSQSNNPSKEELDLIITNALIV 76
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA
repair, ring finger domain, metal binding, DNA
replication; 1.75A {Homo sapiens}
Length = 124
Score = 26.1 bits (57), Expect = 1.9
Identities = 7/31 (22%), Positives = 9/31 (29%), Gaps = 2/31 (6%)
Query: 36 CEICFTNMPSTLMTGLECSHRFCTQCWCEYL 66
C C + + T C H C C
Sbjct: 55 CICCQELVFRPITT--VCQHNVCKDCLDRSF 83
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger,
zinc-binding protein, heterodimer, ubiquitin ligase,
antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Length = 117
Score = 26.0 bits (57), Expect = 2.4
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 35 KCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTK 69
+C C N+ + C H FC+ C + + T
Sbjct: 24 RCSRCT-NILREPVCLGGCEHIFCSNCVSDCIGTG 57
>3la4_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX;
2.05A {Canavalia ensiformis}
Length = 840
Score = 26.4 bits (58), Expect = 2.6
Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 6/30 (20%)
Query: 69 KIIQEGMGQTIACAAHGC------NILVDD 92
K+I++GMGQ+ N ++ D
Sbjct: 319 KVIRDGMGQSCGHPPAISLDTVITNAVIID 348
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding
domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 70
Score = 24.7 bits (54), Expect = 3.4
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Query: 30 TSSKSKCEICFTNMPSTLMTGLECSHRFCTQC 61
+ + +C IC + L C+H FC +C
Sbjct: 12 LTDEEECCICMDGRADLI---LPCAHSFCQKC 40
>4epo_C E3 ubiquitin-protein ligase RNF8; coiled-coil, E3 ubiquitin
ligase, protein binding complex; 4.80A {Homo sapiens}
Length = 149
Score = 25.8 bits (56), Expect = 3.7
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 35 KCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTK 69
+C IC L C+H FC+ C E++ K
Sbjct: 66 QCIICSEYF--IEAVTLNCAHSFCSYCINEWMKRK 98
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha,
coiled coil, cytoplasm, metal- binding, UBL
conjugation, UBL conjugation pathway; 2.20A {Homo
sapiens}
Length = 170
Score = 25.4 bits (55), Expect = 4.0
Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 31 SSKSKCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTK 69
SK +C IC + + T C HRFC C + +
Sbjct: 16 ESKYECPICLMALREAVQT--PCGHRFCKACIIKSIRDA 52
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative
splicing, HOST-virus interaction, UBL conjugation
pathway, zinc-finger, polymorphism; HET: FLC; 2.20A
{Homo sapiens} PDB: 2vjf_B*
Length = 63
Score = 24.4 bits (53), Expect = 4.2
Identities = 5/36 (13%), Positives = 9/36 (25%), Gaps = 1/36 (2%)
Query: 27 QPSTSSKSKCEICFTNMPSTLMTGLECSHRF-CTQC 61
+ + C +C + H C C
Sbjct: 1 EDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHC 36
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila
melanogaster}
Length = 381
Score = 25.6 bits (55), Expect = 4.6
Identities = 9/39 (23%), Positives = 13/39 (33%), Gaps = 6/39 (15%)
Query: 36 CEICFT------NMPSTLMTGLECSHRFCTQCWCEYLTT 68
C ICF +P +C + C E+ T
Sbjct: 311 CNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKT 349
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA
damage, chromatin regulator, chromosomal protein, DNA
repair, metal-binding; 2.12A {Homo sapiens}
Length = 115
Score = 24.9 bits (54), Expect = 6.2
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 6/36 (16%)
Query: 36 CEICFTNM--PSTLMTGLECSHRFCTQCWCEYLTTK 69
C IC + P TL C+H C C+ +
Sbjct: 18 CGICMEILVEPVTL----PCNHTLCKPCFQSTVEKA 49
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4),
metal binding protein; NMR {Homo sapiens} SCOP:
g.44.1.1
Length = 65
Score = 24.1 bits (52), Expect = 6.2
Identities = 9/30 (30%), Positives = 10/30 (33%), Gaps = 3/30 (10%)
Query: 35 KCEICFTNM---PSTLMTGLECSHRFCTQC 61
C C T PS + C H C C
Sbjct: 5 GCPRCKTTKYRNPSLKLMVNVCGHTLCESC 34
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene,
phosphorylation, alternative splicing, HOST-virus
interaction, UBL conjugation pathway, zinc-finger,
polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB:
2vjf_A* 2hdp_A
Length = 64
Score = 24.0 bits (52), Expect = 7.3
Identities = 6/32 (18%), Positives = 11/32 (34%), Gaps = 1/32 (3%)
Query: 31 SSKSKCEICFTNMPSTLMTGLECSHRF-CTQC 61
++ C IC + + + H C C
Sbjct: 6 NAIEPCVICQGRPKNGCIVHGKTGHLMACFTC 37
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc
binuclear cluster, zinc finger, DNA-binding protein;
2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Length = 116
Score = 24.5 bits (53), Expect = 7.6
Identities = 10/35 (28%), Positives = 13/35 (37%), Gaps = 2/35 (5%)
Query: 35 KCEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTK 69
C+IC + + T C H FC C L
Sbjct: 25 SCQICEHILADPVET--SCKHLFCRICILRCLKVM 57
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus}
SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Length = 361
Score = 25.1 bits (55), Expect = 7.9
Identities = 4/19 (21%), Positives = 5/19 (26%)
Query: 76 GQTIACAAHGCNILVDDGT 94
G +D GT
Sbjct: 222 GSDAVSFDGAQAFTIDTGT 240
>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain,
structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Arabidopsis
thaliana} SCOP: g.72.1.1
Length = 60
Score = 23.5 bits (51), Expect = 8.1
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Query: 36 CEICFTNMPSTLMTGLECSHRFCTQC 61
CEI + L+ G+ RFC QC
Sbjct: 28 CEIHS-KATTALVGGIM--QRFCQQC 50
>2ecw_A Tripartite motif-containing protein 30; metal binding protein,
structural genomics, NPPSFA; NMR {Mus musculus}
Length = 85
Score = 23.9 bits (52), Expect = 9.2
Identities = 9/39 (23%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 36 CEICFTNMPSTLMTGLECSHRFCTQCWCEYLTTKIIQEG 74
C IC + + +C+H FC C + +G
Sbjct: 22 CPICLELLKEPVS--ADCNHSFCRACITLNYESNRNTDG 58
>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D
bond, glycoprotein, membrane, secreted, signal-anchor,
transmembrane, apoptosis; 2.45A {Homo sapiens} PDB:
3mi8_D 3mhd_D
Length = 176
Score = 24.4 bits (52), Expect = 9.5
Identities = 5/38 (13%), Positives = 7/38 (18%)
Query: 27 QPSTSSKSKCEICFTNMPSTLMTGLECSHRFCTQCWCE 64
+ +C C C C C
Sbjct: 52 TQFWNYLERCRYCNVLCGEREEEARACHATHNRACRCR 89
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding
oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium
violaceum} PDB: 3q2k_A*
Length = 354
Score = 24.6 bits (54), Expect = 9.8
Identities = 4/14 (28%), Positives = 9/14 (64%)
Query: 77 QTIACAAHGCNILV 90
Q+I C+ G +++
Sbjct: 91 QSIECSEAGFHVMT 104
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.322 0.134 0.418
Gapped
Lambda K H
0.267 0.0544 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,751,531
Number of extensions: 86918
Number of successful extensions: 306
Number of sequences better than 10.0: 1
Number of HSP's gapped: 304
Number of HSP's successfully gapped: 76
Length of query: 118
Length of database: 6,701,793
Length adjustment: 81
Effective length of query: 37
Effective length of database: 4,440,192
Effective search space: 164287104
Effective search space used: 164287104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (23.8 bits)