Your job contains 1 sequence.
>psy7609
MKHEYKLVSINSEPLRDHIKGSWVQVVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQ
KRKMRSYFGFQRKAIVVVPTNEDYLARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGE
LFEEVTYIELQHPEAEKIIDEYNKNADGTYNYPQNWNAQNWQGYGYSTTGQTGTTGQTGQ
STQGASKMISAADFESGGWWFESKSRYKISLVQLFVRFLGVYLKNQ
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7609
(226 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|J9JHA9 - symbol:HNRNPUL1 "Uncharacterized prote... 359 5.4e-32 1
UNIPROTKB|B7Z4B8 - symbol:HNRNPUL1 "cDNA FLJ56481, highly... 359 5.6e-32 1
MGI|MGI:2443517 - symbol:Hnrnpul1 "heterogeneous nuclear ... 360 5.8e-32 1
UNIPROTKB|E2RNY1 - symbol:HNRNPUL1 "Uncharacterized prote... 359 7.4e-32 1
UNIPROTKB|Q9BUJ2 - symbol:HNRNPUL1 "Heterogeneous nuclear... 359 7.4e-32 1
UNIPROTKB|A4FUC2 - symbol:HNRNPUL1 "Uncharacterized prote... 359 7.4e-32 1
RGD|1307456 - symbol:Hnrnpul1 "heterogeneous nuclear ribo... 359 7.5e-32 1
ZFIN|ZDB-GENE-040426-2432 - symbol:hnrnpul1 "heterogeneou... 328 8.7e-30 2
UNIPROTKB|F1MFT4 - symbol:HNRNPU "Uncharacterized protein... 314 3.2e-27 1
UNIPROTKB|J9P6J3 - symbol:HNRNPU "Uncharacterized protein... 314 3.2e-27 1
UNIPROTKB|F1Q3W0 - symbol:HNRNPU "Uncharacterized protein... 314 4.2e-27 1
UNIPROTKB|F1S8L9 - symbol:HNRNPU "Uncharacterized protein... 314 4.3e-27 1
RGD|620372 - symbol:Hnrnpu "heterogeneous nuclear ribonuc... 314 4.4e-27 1
MGI|MGI:1858195 - symbol:Hnrnpu "heterogeneous nuclear ri... 314 4.4e-27 1
UNIPROTKB|Q00839 - symbol:HNRNPU "Heterogeneous nuclear r... 314 4.7e-27 1
UNIPROTKB|F1NSP8 - symbol:HNRNPU "Uncharacterized protein... 308 1.1e-26 1
MGI|MGI:1915943 - symbol:Hnrnpul2 "heterogeneous nuclear ... 290 8.8e-26 2
RGD|1562784 - symbol:Hnrnpul2 "heterogeneous nuclear ribo... 290 8.8e-26 2
UNIPROTKB|I3LUR1 - symbol:HNRNPUL2 "Uncharacterized prote... 290 8.9e-26 2
UNIPROTKB|F1P8K1 - symbol:HNRNPUL2 "Uncharacterized prote... 290 8.9e-26 2
UNIPROTKB|Q1KMD3 - symbol:HNRNPUL2 "Heterogeneous nuclear... 290 1.1e-25 2
UNIPROTKB|F1NM96 - symbol:HNRNPU "Uncharacterized protein... 297 1.5e-25 1
UNIPROTKB|H3BQZ7 - symbol:hCG_2044799 "Uncharacterized pr... 290 1.4e-24 1
UNIPROTKB|E1BNQ9 - symbol:HNRNPUL2 "Uncharacterized prote... 290 1.5e-24 1
UNIPROTKB|J9PAS2 - symbol:HNRNPUL2 "Uncharacterized prote... 290 1.5e-24 1
ZFIN|ZDB-GENE-030131-6422 - symbol:hnrnpub "heterogeneous... 278 2.8e-24 2
UNIPROTKB|I3LU51 - symbol:HNRNPUL1 "Uncharacterized prote... 282 1.4e-23 1
ZFIN|ZDB-GENE-030131-3731 - symbol:hnrnpua "heterogeneous... 250 3.0e-20 1
ZFIN|ZDB-GENE-081107-3 - symbol:si:ch211-107m4.1 "si:ch21... 247 5.6e-20 1
FB|FBgn0050122 - symbol:CG30122 species:7227 "Drosophila ... 229 1.2e-17 1
WB|WBGene00012769 - symbol:Y41E3.11 species:6239 "Caenorh... 154 1.5e-09 1
UNIPROTKB|F1NM97 - symbol:HNRNPU "Uncharacterized protein... 113 1.2e-06 1
>UNIPROTKB|J9JHA9 [details] [associations]
symbol:HNRNPUL1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0009615 "response to virus"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
InterPro:IPR003877 InterPro:IPR027025 Pfam:PF00622 GO:GO:0009615
GO:GO:0006396 InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 CTD:11100
KO:K15047 PANTHER:PTHR12381:SF10 GeneTree:ENSGT00390000020210
EMBL:AAEX03000936 GeneID:476452 KEGG:cfa:476452
RefSeq:XP_003432631.1 RefSeq:XP_533659.2 RefSeq:XP_866586.1
Ensembl:ENSCAFT00000048725 Uniprot:J9JHA9
Length = 756
Score = 359 (131.4 bits), Expect = 5.4e-32, P = 5.4e-32
Identities = 67/124 (54%), Positives = 93/124 (75%)
Query: 21 GSWVQVVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPT 80
G W ++ + T+CLNRL+++ ++RNYILDQTNVY SAQ+RKMR + GFQRKAIV+ PT
Sbjct: 375 GRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPT 434
Query: 81 NEDYLARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIID 140
+ED R ++EGKD PD+ +LEMKANF LP+VG+ +EV +IELQ EA+K++
Sbjct: 435 DEDLKDRTIKRTDEEGKD--VPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVR 492
Query: 141 EYNK 144
+YN+
Sbjct: 493 QYNE 496
>UNIPROTKB|B7Z4B8 [details] [associations]
symbol:HNRNPUL1 "cDNA FLJ56481, highly similar to
Heterogeneous nuclear ribonucleoprotein U-like protein 1"
species:9606 "Homo sapiens" [GO:0006396 "RNA processing"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR003877
InterPro:IPR027025 Pfam:PF00622 GO:GO:0003676 GO:GO:0009615
GO:GO:0006396 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0030529
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
EMBL:AC011462 EMBL:AC011510 UniGene:Hs.155218 UniGene:Hs.718642
HGNC:HGNC:17011 HOVERGEN:HBG061101 ChiTaRS:HNRNPUL1
PANTHER:PTHR12381:SF10 EMBL:AK297127 IPI:IPI01009355 SMR:B7Z4B8
STRING:B7Z4B8 Ensembl:ENST00000263367 Uniprot:B7Z4B8
Length = 767
Score = 359 (131.4 bits), Expect = 5.6e-32, P = 5.6e-32
Identities = 67/124 (54%), Positives = 93/124 (75%)
Query: 21 GSWVQVVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPT 80
G W ++ + T+CLNRL+++ ++RNYILDQTNVY SAQ+RKMR + GFQRKAIV+ PT
Sbjct: 386 GRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPT 445
Query: 81 NEDYLARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIID 140
+ED R ++EGKD PD+ +LEMKANF LP+VG+ +EV +IELQ EA+K++
Sbjct: 446 DEDLKDRTIKRTDEEGKD--VPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVR 503
Query: 141 EYNK 144
+YN+
Sbjct: 504 QYNE 507
>MGI|MGI:2443517 [details] [associations]
symbol:Hnrnpul1 "heterogeneous nuclear ribonucleoprotein
U-like 1" species:10090 "Mus musculus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0009615 "response to virus"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR003034 InterPro:IPR003877 InterPro:IPR027025
Pfam:PF00622 Pfam:PF02037 PROSITE:PS50800 SMART:SM00513
MGI:MGI:2443517 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
GO:GO:0003723 GO:GO:0009615 GO:GO:0006396 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:1.10.720.30 GO:GO:0030529 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 CTD:11100
eggNOG:NOG297571 HOVERGEN:HBG061101 KO:K15047 OMA:SGPDGHY
OrthoDB:EOG4XWFXQ PANTHER:PTHR12381:SF10 EMBL:AK042090
EMBL:AK143666 EMBL:AK155604 EMBL:BC021506 EMBL:BC027844
EMBL:BC078642 IPI:IPI00123501 IPI:IPI00269280 IPI:IPI00742433
RefSeq:NP_659171.1 RefSeq:NP_835190.1 UniGene:Mm.254223
ProteinModelPortal:Q8VDM6 SMR:Q8VDM6 STRING:Q8VDM6
PhosphoSite:Q8VDM6 PaxDb:Q8VDM6 PRIDE:Q8VDM6
Ensembl:ENSMUST00000043765 Ensembl:ENSMUST00000108401 GeneID:232989
KEGG:mmu:232989 UCSC:uc009ftu.1 UCSC:uc009ftv.1 UCSC:uc009ftw.1
GeneTree:ENSGT00390000020210 HOGENOM:HOG000253920 InParanoid:Q8VDM6
NextBio:381431 Bgee:Q8VDM6 Genevestigator:Q8VDM6
GermOnline:ENSMUSG00000040725 Uniprot:Q8VDM6
Length = 859
Score = 360 (131.8 bits), Expect = 5.8e-32, P = 5.8e-32
Identities = 67/124 (54%), Positives = 93/124 (75%)
Query: 21 GSWVQVVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPT 80
G W ++ + T+CLNRL+++ ++RNYILDQTNVY SAQ+RKMR + GFQRKAIV+ PT
Sbjct: 476 GRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPT 535
Query: 81 NEDYLARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIID 140
+ED R ++EGKD PD+ +LEMKANF LP+VG+ +EV +IELQ EA+K++
Sbjct: 536 DEDLKDRTVKRTDEEGKD--VPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVR 593
Query: 141 EYNK 144
+YN+
Sbjct: 594 QYNE 597
>UNIPROTKB|E2RNY1 [details] [associations]
symbol:HNRNPUL1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0009615 "response to virus"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR003034
InterPro:IPR003877 InterPro:IPR027025 Pfam:PF00622 Pfam:PF02037
PROSITE:PS50800 SMART:SM00513 GO:GO:0005634 GO:GO:0003676
GO:GO:0009615 GO:GO:0006396 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:1.10.720.30 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 CTD:11100 KO:K15047 OMA:SGPDGHY
PANTHER:PTHR12381:SF10 GeneTree:ENSGT00390000020210
EMBL:AAEX03000936 RefSeq:XP_852865.1 Ensembl:ENSCAFT00000008087
GeneID:476452 KEGG:cfa:476452 NextBio:20852109 Uniprot:E2RNY1
Length = 856
Score = 359 (131.4 bits), Expect = 7.4e-32, P = 7.4e-32
Identities = 67/124 (54%), Positives = 93/124 (75%)
Query: 21 GSWVQVVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPT 80
G W ++ + T+CLNRL+++ ++RNYILDQTNVY SAQ+RKMR + GFQRKAIV+ PT
Sbjct: 475 GRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPT 534
Query: 81 NEDYLARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIID 140
+ED R ++EGKD PD+ +LEMKANF LP+VG+ +EV +IELQ EA+K++
Sbjct: 535 DEDLKDRTIKRTDEEGKD--VPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVR 592
Query: 141 EYNK 144
+YN+
Sbjct: 593 QYNE 596
>UNIPROTKB|Q9BUJ2 [details] [associations]
symbol:HNRNPUL1 "Heterogeneous nuclear ribonucleoprotein
U-like protein 1" species:9606 "Homo sapiens" [GO:0009615 "response
to virus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
InterPro:IPR003034 InterPro:IPR003877 InterPro:IPR027025
Pfam:PF00622 Pfam:PF02037 PROSITE:PS50800 SMART:SM00513
GO:GO:0005654 GO:GO:0006355 Reactome:REACT_1675 EMBL:CH471126
GO:GO:0006351 GO:GO:0003723 GO:GO:0009615 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:1.10.720.30 GO:GO:0030529 GO:GO:0000398
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
EMBL:AC011462 EMBL:AJ007509 EMBL:AK021455 EMBL:AK022863
EMBL:AK127057 EMBL:AC011510 EMBL:BC002564 EMBL:BC009988
EMBL:BC014232 EMBL:BC027713 EMBL:AL050146 IPI:IPI00013070
IPI:IPI00167147 IPI:IPI00386971 IPI:IPI00402391 IPI:IPI00736859
PIR:T08776 PIR:T13159 RefSeq:NP_008971.2 RefSeq:NP_653333.1
UniGene:Hs.155218 UniGene:Hs.718642 ProteinModelPortal:Q9BUJ2
SMR:Q9BUJ2 IntAct:Q9BUJ2 MINT:MINT-121512 STRING:Q9BUJ2
PhosphoSite:Q9BUJ2 DMDM:90101344 PaxDb:Q9BUJ2 PRIDE:Q9BUJ2
DNASU:11100 Ensembl:ENST00000352456 Ensembl:ENST00000378215
Ensembl:ENST00000392006 GeneID:11100 KEGG:hsa:11100 UCSC:uc002opz.4
UCSC:uc002oqc.4 UCSC:uc002oqf.4 UCSC:uc010ehl.1 UCSC:uc010ehm.3
CTD:11100 GeneCards:GC19P041768 HGNC:HGNC:17011 MIM:605800
neXtProt:NX_Q9BUJ2 PharmGKB:PA162391519 eggNOG:NOG297571
HOVERGEN:HBG061101 InParanoid:Q9BUJ2 KO:K15047 OMA:SGPDGHY
OrthoDB:EOG4XWFXQ PhylomeDB:Q9BUJ2 ChiTaRS:HNRNPUL1
GenomeRNAi:11100 NextBio:42198 ArrayExpress:Q9BUJ2 Bgee:Q9BUJ2
CleanEx:HS_HNRNPUL1 Genevestigator:Q9BUJ2
GermOnline:ENSG00000105323 PANTHER:PTHR12381:SF10 Uniprot:Q9BUJ2
Length = 856
Score = 359 (131.4 bits), Expect = 7.4e-32, P = 7.4e-32
Identities = 67/124 (54%), Positives = 93/124 (75%)
Query: 21 GSWVQVVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPT 80
G W ++ + T+CLNRL+++ ++RNYILDQTNVY SAQ+RKMR + GFQRKAIV+ PT
Sbjct: 475 GRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPT 534
Query: 81 NEDYLARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIID 140
+ED R ++EGKD PD+ +LEMKANF LP+VG+ +EV +IELQ EA+K++
Sbjct: 535 DEDLKDRTIKRTDEEGKD--VPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVR 592
Query: 141 EYNK 144
+YN+
Sbjct: 593 QYNE 596
>UNIPROTKB|A4FUC2 [details] [associations]
symbol:HNRNPUL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019899 "enzyme binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0009615 "response to virus"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR003034
InterPro:IPR003877 InterPro:IPR027025 Pfam:PF00622 Pfam:PF02037
PROSITE:PS50800 SMART:SM00513 GO:GO:0005634 GO:GO:0003676
GO:GO:0009615 GO:GO:0006396 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:1.10.720.30 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 CTD:11100 eggNOG:NOG297571
HOVERGEN:HBG061101 KO:K15047 OMA:SGPDGHY OrthoDB:EOG4XWFXQ
PANTHER:PTHR12381:SF10 GeneTree:ENSGT00390000020210
HOGENOM:HOG000253920 EMBL:DAAA02047108 EMBL:BC114691
IPI:IPI00709819 RefSeq:NP_001076935.1 UniGene:Bt.14321 SMR:A4FUC2
STRING:A4FUC2 Ensembl:ENSBTAT00000004114 GeneID:533197
KEGG:bta:533197 InParanoid:A4FUC2 NextBio:20875952 Uniprot:A4FUC2
Length = 858
Score = 359 (131.4 bits), Expect = 7.4e-32, P = 7.4e-32
Identities = 67/124 (54%), Positives = 93/124 (75%)
Query: 21 GSWVQVVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPT 80
G W ++ + T+CLNRL+++ ++RNYILDQTNVY SAQ+RKMR + GFQRKAIV+ PT
Sbjct: 476 GRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPT 535
Query: 81 NEDYLARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIID 140
+ED R ++EGKD PD+ +LEMKANF LP+VG+ +EV +IELQ EA+K++
Sbjct: 536 DEDLKDRTIKRTDEEGKD--VPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVR 593
Query: 141 EYNK 144
+YN+
Sbjct: 594 QYNE 597
>RGD|1307456 [details] [associations]
symbol:Hnrnpul1 "heterogeneous nuclear ribonucleoprotein U-like
1" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0009615 "response to
virus" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA;ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR003034 InterPro:IPR003877 InterPro:IPR027025
Pfam:PF00622 Pfam:PF02037 PROSITE:PS50800 SMART:SM00513 RGD:1307456
GO:GO:0005634 GO:GO:0003676 GO:GO:0009615 GO:GO:0006396
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:1.10.720.30 GO:GO:0030529
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
EMBL:CH473979 CTD:11100 KO:K15047 OMA:SGPDGHY OrthoDB:EOG4XWFXQ
PANTHER:PTHR12381:SF10 GeneTree:ENSGT00390000020210 IPI:IPI00365665
RefSeq:NP_001101947.1 UniGene:Rn.95170 Ensembl:ENSRNOT00000028100
GeneID:361522 KEGG:rno:361522 UCSC:RGD:1307456 NextBio:676592
Uniprot:D4A962
Length = 859
Score = 359 (131.4 bits), Expect = 7.5e-32, P = 7.5e-32
Identities = 67/124 (54%), Positives = 93/124 (75%)
Query: 21 GSWVQVVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPT 80
G W ++ + T+CLNRL+++ ++RNYILDQTNVY SAQ+RKMR + GFQRKAIV+ PT
Sbjct: 476 GRWDVLIQQATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPT 535
Query: 81 NEDYLARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIID 140
+ED R ++EGKD PD+ +LEMKANF LP+VG+ +EV +IELQ EA+K++
Sbjct: 536 DEDLKDRTIKRTDEEGKD--VPDHAVLEMKANFTLPDVGDFLDEVLFIELQREEADKLVR 593
Query: 141 EYNK 144
+YN+
Sbjct: 594 QYNE 597
>ZFIN|ZDB-GENE-040426-2432 [details] [associations]
symbol:hnrnpul1 "heterogeneous nuclear
ribonucleoprotein U-like 1" species:7955 "Danio rerio" [GO:0006396
"RNA processing" evidence=IEA] [GO:0009615 "response to virus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR003034 InterPro:IPR027025 Pfam:PF02037 PROSITE:PS50800
SMART:SM00513 ZFIN:ZDB-GENE-040426-2432 GO:GO:0003676 GO:GO:0009615
GO:GO:0006396 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:1.10.720.30
GO:GO:0030529 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 CTD:11100 HOVERGEN:HBG061101 KO:K15047
PANTHER:PTHR12381:SF10 EMBL:BC068436 IPI:IPI00493247
RefSeq:NP_998436.1 UniGene:Dr.77145 ProteinModelPortal:Q6NUT5
SMR:Q6NUT5 STRING:Q6NUT5 PRIDE:Q6NUT5 GeneID:406555 KEGG:dre:406555
InParanoid:Q6NUT5 NextBio:20818115 ArrayExpress:Q6NUT5 Bgee:Q6NUT5
Uniprot:Q6NUT5
Length = 784
Score = 328 (120.5 bits), Expect = 8.7e-30, Sum P(2) = 8.7e-30
Identities = 64/124 (51%), Positives = 86/124 (69%)
Query: 21 GSWVQVVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPT 80
G W ++ + T+CLNRLL++ ++RNYILDQTNVY SAQ+RKMR + GF RKA+V+ P
Sbjct: 465 GRWDILIQQATQCLNRLLQIASHKKRNYILDQTNVYGSAQRRKMRPFEGFHRKAVVICPR 524
Query: 81 NEDYLARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIID 140
+ED R + ++GKD PD +LEMKANF LPE G+ +EV +IELQ EA +I
Sbjct: 525 DEDLKER-RCKQAEDGKD--VPDQAVLEMKANFVLPEAGDFLDEVMFIELQRDEARDLIK 581
Query: 141 EYNK 144
YN+
Sbjct: 582 RYNE 585
Score = 36 (17.7 bits), Expect = 8.7e-30, Sum P(2) = 8.7e-30
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 143 NKNADGTYNYPQNWNAQNW 161
N+++ G NY Q +N N+
Sbjct: 697 NQSSYGQGNYNQGYNYGNY 715
>UNIPROTKB|F1MFT4 [details] [associations]
symbol:HNRNPU "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA]
InterPro:IPR003877 InterPro:IPR026745 Pfam:PF00622
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0071013 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0070937
GO:GO:0070934 GeneTree:ENSGT00390000020210 OMA:PYPRAPV
PANTHER:PTHR12381:SF11 EMBL:DAAA02042728 EMBL:DAAA02042729
IPI:IPI00688257 Ensembl:ENSBTAT00000052059 ArrayExpress:F1MFT4
Uniprot:F1MFT4
Length = 701
Score = 314 (115.6 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 57/121 (47%), Positives = 87/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
++ + +CL + +E+ ++RN+ILDQTNV +AQ+RKM + GFQRKA+VV P +EDY
Sbjct: 431 LLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYK 490
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
R + E EGKD P++ +L+MK NF LPEV E F+E+TY+ELQ EA+K++++Y +
Sbjct: 491 QRTQKKAEVEGKD--LPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKLLEQYKEE 548
Query: 146 A 146
+
Sbjct: 549 S 549
>UNIPROTKB|J9P6J3 [details] [associations]
symbol:HNRNPU "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003877 InterPro:IPR026745 Pfam:PF00622 GO:GO:0005634
InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GeneTree:ENSGT00390000020210 PANTHER:PTHR12381:SF11
EMBL:AAEX03005257 EMBL:AAEX03005258 Ensembl:ENSCAFT00000043229
Uniprot:J9P6J3
Length = 702
Score = 314 (115.6 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 57/121 (47%), Positives = 87/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
++ + +CL + +E+ ++RN+ILDQTNV +AQ+RKM + GFQRKA+VV P +EDY
Sbjct: 433 LLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYK 492
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
R + E EGKD P++ +L+MK NF LPEV E F+E+TY+ELQ EA+K++++Y +
Sbjct: 493 QRTQKKAEVEGKD--LPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKLLEQYKEE 550
Query: 146 A 146
+
Sbjct: 551 S 551
>UNIPROTKB|F1Q3W0 [details] [associations]
symbol:HNRNPU "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003877 InterPro:IPR026745 Pfam:PF00622 GO:GO:0005634
InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GeneTree:ENSGT00390000020210 OMA:PYPRAPV PANTHER:PTHR12381:SF11
EMBL:AAEX03005257 EMBL:AAEX03005258 Ensembl:ENSCAFT00000025085
Uniprot:F1Q3W0
Length = 783
Score = 314 (115.6 bits), Expect = 4.2e-27, P = 4.2e-27
Identities = 57/121 (47%), Positives = 87/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
++ + +CL + +E+ ++RN+ILDQTNV +AQ+RKM + GFQRKA+VV P +EDY
Sbjct: 513 LLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYK 572
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
R + E EGKD P++ +L+MK NF LPEV E F+E+TY+ELQ EA+K++++Y +
Sbjct: 573 QRTQKKAEVEGKD--LPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKLLEQYKEE 630
Query: 146 A 146
+
Sbjct: 631 S 631
>UNIPROTKB|F1S8L9 [details] [associations]
symbol:HNRNPU "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR003034
InterPro:IPR003877 InterPro:IPR026745 Pfam:PF00622 Pfam:PF02037
PROSITE:PS50800 SMART:SM00513 GO:GO:0003676 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:1.10.720.30 GO:GO:0071013 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0070937
GO:GO:0070934 GeneTree:ENSGT00390000020210 OMA:PYPRAPV
PANTHER:PTHR12381:SF11 EMBL:CU915438 Ensembl:ENSSSCT00000011900
Uniprot:F1S8L9
Length = 789
Score = 314 (115.6 bits), Expect = 4.3e-27, P = 4.3e-27
Identities = 57/121 (47%), Positives = 87/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
++ + +CL + +E+ ++RN+ILDQTNV +AQ+RKM + GFQRKA+VV P +EDY
Sbjct: 536 LLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYK 595
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
R + E EGKD P++ +L+MK NF LPEV E F+E+TY+ELQ EA+K++++Y +
Sbjct: 596 QRTQKKAEVEGKD--LPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKLLEQYKEE 653
Query: 146 A 146
+
Sbjct: 654 S 654
>RGD|620372 [details] [associations]
symbol:Hnrnpu "heterogeneous nuclear ribonucleoprotein U"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005215 "transporter activity"
evidence=NAS] [GO:0006810 "transport" evidence=NAS] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0070934 "CRD-mediated
mRNA stabilization" evidence=IEA;ISO] [GO:0070937 "CRD-mediated
mRNA stability complex" evidence=IEA;ISO] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR003034
InterPro:IPR003877 InterPro:IPR026745 Pfam:PF00622 Pfam:PF02037
PROSITE:PS50800 SMART:SM00513 RGD:620372 GO:GO:0003676
GO:GO:0005215 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:1.10.720.30
GO:GO:0071013 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 GO:GO:0070937 GO:GO:0070934 EMBL:CH473985
HOVERGEN:HBG061101 GeneTree:ENSGT00390000020210 CTD:3192 KO:K12888
PANTHER:PTHR12381:SF11 EMBL:BC072529 IPI:IPI00210090
RefSeq:NP_476480.2 UniGene:Rn.4328 SMR:Q6IMY8 IntAct:Q6IMY8
STRING:Q6IMY8 Ensembl:ENSRNOT00000044477 GeneID:117280
KEGG:rno:117280 NextBio:620231 Genevestigator:Q6IMY8 Uniprot:Q6IMY8
Length = 798
Score = 314 (115.6 bits), Expect = 4.4e-27, P = 4.4e-27
Identities = 57/121 (47%), Positives = 87/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
++ + +CL + +E+ ++RN+ILDQTNV +AQ+RKM + GFQRKA+VV P +EDY
Sbjct: 529 LLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYK 588
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
R + E EGKD P++ +L+MK NF LPEV E F+E+TY+ELQ EA+K++++Y +
Sbjct: 589 QRTQKKAEVEGKD--LPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKLLEQYKEE 646
Query: 146 A 146
+
Sbjct: 647 S 647
>MGI|MGI:1858195 [details] [associations]
symbol:Hnrnpu "heterogeneous nuclear ribonucleoprotein U"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] [GO:0070934 "CRD-mediated
mRNA stabilization" evidence=ISO] [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR003034 InterPro:IPR003877
InterPro:IPR026745 Pfam:PF00622 Pfam:PF02037 PROSITE:PS50800
SMART:SM00513 MGI:MGI:1858195 GO:GO:0005524 GO:GO:0009986
GO:GO:0008380 GO:GO:0003677 GO:GO:0006397 GO:GO:0003723
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:1.10.720.30 GO:GO:0071013
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GO:GO:0070937 GO:GO:0070934 EMBL:CH466555 eggNOG:NOG297571
GeneTree:ENSGT00390000020210 HOGENOM:HOG000253920 CTD:3192
KO:K12888 OMA:PYPRAPV ChiTaRS:HNRNPU PANTHER:PTHR12381:SF11
EMBL:AK165844 EMBL:BC018353 IPI:IPI00458583 RefSeq:NP_058085.2
UniGene:Mm.482674 UniGene:Mm.86589 HSSP:Q00839
ProteinModelPortal:Q8VEK3 SMR:Q8VEK3 IntAct:Q8VEK3 STRING:Q8VEK3
PhosphoSite:Q8VEK3 PaxDb:Q8VEK3 PRIDE:Q8VEK3
Ensembl:ENSMUST00000037748 GeneID:51810 KEGG:mmu:51810
UCSC:uc011wxl.1 InParanoid:Q8VEK3 OrthoDB:EOG447FSZ NextBio:308060
Bgee:Q8VEK3 Uniprot:Q8VEK3
Length = 800
Score = 314 (115.6 bits), Expect = 4.4e-27, P = 4.4e-27
Identities = 57/121 (47%), Positives = 87/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
++ + +CL + +E+ ++RN+ILDQTNV +AQ+RKM + GFQRKA+VV P +EDY
Sbjct: 531 LLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYK 590
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
R + E EGKD P++ +L+MK NF LPEV E F+E+TY+ELQ EA+K++++Y +
Sbjct: 591 QRTQKKAEVEGKD--LPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKLLEQYKEE 648
Query: 146 A 146
+
Sbjct: 649 S 649
>UNIPROTKB|Q00839 [details] [associations]
symbol:HNRNPU "Heterogeneous nuclear ribonucleoprotein U"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0070934
"CRD-mediated mRNA stabilization" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
Reactome:REACT_71 InterPro:IPR003034 InterPro:IPR003877
InterPro:IPR026745 Pfam:PF00622 Pfam:PF02037 PROSITE:PS50800
SMART:SM00513 GO:GO:0005524 GO:GO:0005654 GO:GO:0009986
GO:GO:0003677 Reactome:REACT_1675 GO:GO:0003723 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:1.10.720.30 GO:GO:0000398 GO:GO:0071013
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
EMBL:BX323046 GO:GO:0070937 GO:GO:0070934 eggNOG:NOG297571
HOVERGEN:HBG061101 HOGENOM:HOG000253920 EMBL:X65488 EMBL:AF068846
EMBL:BC003367 EMBL:BC003621 EMBL:BC007950 EMBL:BC024767
EMBL:BC034925 IPI:IPI00479217 IPI:IPI00883857 PIR:S22765
RefSeq:NP_004492.2 RefSeq:NP_114032.2 UniGene:Hs.106212 PDB:1ZRJ
PDBsum:1ZRJ ProteinModelPortal:Q00839 SMR:Q00839 DIP:DIP-684N
IntAct:Q00839 MINT:MINT-1654412 STRING:Q00839 PhosphoSite:Q00839
DMDM:254763463 PaxDb:Q00839 PRIDE:Q00839 DNASU:3192
Ensembl:ENST00000283179 Ensembl:ENST00000444376 GeneID:3192
KEGG:hsa:3192 UCSC:uc001iaz.1 UCSC:uc001iba.1 CTD:3192
GeneCards:GC01M245013 HGNC:HGNC:5048 HPA:CAB011532 MIM:602869
neXtProt:NX_Q00839 PharmGKB:PA162391486 InParanoid:Q00839 KO:K12888
OMA:PYPRAPV ChiTaRS:HNRNPU EvolutionaryTrace:Q00839 GenomeRNAi:3192
NextBio:12700 ArrayExpress:Q00839 Bgee:Q00839 CleanEx:HS_HNRNPU
Genevestigator:Q00839 GermOnline:ENSG00000153187
PANTHER:PTHR12381:SF11 Uniprot:Q00839
Length = 825
Score = 314 (115.6 bits), Expect = 4.7e-27, P = 4.7e-27
Identities = 57/121 (47%), Positives = 87/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
++ + +CL + +E+ ++RN+ILDQTNV +AQ+RKM + GFQRKA+VV P +EDY
Sbjct: 555 LLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYK 614
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
R + E EGKD P++ +L+MK NF LPEV E F+E+TY+ELQ EA+K++++Y +
Sbjct: 615 QRTQKKAEVEGKD--LPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKLLEQYKEE 672
Query: 146 A 146
+
Sbjct: 673 S 673
>UNIPROTKB|F1NSP8 [details] [associations]
symbol:HNRNPU "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR003877 InterPro:IPR026745 Pfam:PF00622
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0071013 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0070937
GO:GO:0070934 GeneTree:ENSGT00390000020210 OMA:PYPRAPV
PANTHER:PTHR12381:SF11 EMBL:AADN02011778 EMBL:AADN02011777
IPI:IPI00823227 Ensembl:ENSGALT00000017361 Uniprot:F1NSP8
Length = 633
Score = 308 (113.5 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 56/121 (46%), Positives = 86/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
++ + +CL + +E+ ++RN+ILDQTNV +AQ+RKM + GFQRKA+VV P +EDY
Sbjct: 362 LLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYK 421
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
R + E EGKD P++ +L+MK NF LPEV E F+E+ Y+ELQ EA+K++++Y +
Sbjct: 422 QRTQKKAEVEGKD--LPEHAVLKMKGNFTLPEVAECFDEIIYVELQKEEAQKLLEQYKEE 479
Query: 146 A 146
+
Sbjct: 480 S 480
>MGI|MGI:1915943 [details] [associations]
symbol:Hnrnpul2 "heterogeneous nuclear ribonucleoprotein
U-like 2" species:10090 "Mus musculus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003034
InterPro:IPR003877 InterPro:IPR027026 Pfam:PF00622 Pfam:PF02037
PROSITE:PS50800 SMART:SM00513 MGI:MGI:1915943 GO:GO:0005634
GO:GO:0003676 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:1.10.720.30
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
eggNOG:NOG297571 HOVERGEN:HBG061101 GeneTree:ENSGT00390000020210
HOGENOM:HOG000253920 CTD:221092 OMA:DYEYNRY OrthoDB:EOG4N30NM
PANTHER:PTHR12381:SF12 EMBL:DQ000354 EMBL:AC129217 IPI:IPI00222208
IPI:IPI01027807 RefSeq:NP_001074665.1 UniGene:Mm.476519
ProteinModelPortal:Q00PI9 PhosphoSite:Q00PI9 PaxDb:Q00PI9
PRIDE:Q00PI9 Ensembl:ENSMUST00000096753 GeneID:68693 KEGG:mmu:68693
UCSC:uc008gng.1 InParanoid:Q00PI9 NextBio:327706
Genevestigator:Q00PI9 Uniprot:Q00PI9
Length = 745
Score = 290 (107.1 bits), Expect = 8.8e-26, Sum P(2) = 8.8e-26
Identities = 57/121 (47%), Positives = 86/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
+V + ++CL++L+++ +RN+ILDQ NVY S Q+RK+ + F RK +VVVP ED+
Sbjct: 509 LVQQASQCLSKLVQIASRSKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWK 568
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
RLE+ +E EG DDVP ++++LEMKANF LPE + +EVTY EL+ EA+ I+ +Y +
Sbjct: 569 RRLELRKEVEG-DDVP-ESIMLEMKANFSLPEKCDYMDEVTYGELEKEEAQPIVTKYKEE 626
Query: 146 A 146
A
Sbjct: 627 A 627
Score = 36 (17.7 bits), Expect = 8.8e-26, Sum P(2) = 8.8e-26
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 141 EYNKNADGTYNYPQNWNAQNW 161
EYN+ D Y ++W QN+
Sbjct: 705 EYNRYRDYYRQYNRDW--QNY 723
>RGD|1562784 [details] [associations]
symbol:Hnrnpul2 "heterogeneous nuclear ribonucleoprotein U-like
2" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
InterPro:IPR003034 InterPro:IPR003877 InterPro:IPR027026
Pfam:PF00622 Pfam:PF02037 PROSITE:PS50800 SMART:SM00513 RGD:1562784
GO:GO:0005634 GO:GO:0003676 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:1.10.720.30 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 GeneTree:ENSGT00390000020210
CTD:221092 OrthoDB:EOG4N30NM PANTHER:PTHR12381:SF12 IPI:IPI00360386
RefSeq:XP_001073417.2 RefSeq:XP_219560.5 PhosphoSite:D4ABT8
PRIDE:D4ABT8 Ensembl:ENSRNOT00000026416 GeneID:309197
KEGG:rno:309197 UCSC:RGD:1562784 NextBio:660409 Uniprot:D4ABT8
Length = 745
Score = 290 (107.1 bits), Expect = 8.8e-26, Sum P(2) = 8.8e-26
Identities = 57/121 (47%), Positives = 86/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
+V + ++CL++L+++ +RN+ILDQ NVY S Q+RK+ + F RK +VVVP ED+
Sbjct: 509 LVQQASQCLSKLVQIASRSKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWK 568
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
RLE+ +E EG DDVP ++++LEMKANF LPE + +EVTY EL+ EA+ I+ +Y +
Sbjct: 569 KRLELRKEVEG-DDVP-ESIMLEMKANFSLPEKCDYMDEVTYGELEKEEAQPIVTKYKEE 626
Query: 146 A 146
A
Sbjct: 627 A 627
Score = 36 (17.7 bits), Expect = 8.8e-26, Sum P(2) = 8.8e-26
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 141 EYNKNADGTYNYPQNWNAQNW 161
EYN+ D Y ++W QN+
Sbjct: 705 EYNRYRDYYRQYNRDW--QNY 723
>UNIPROTKB|I3LUR1 [details] [associations]
symbol:HNRNPUL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR003877
InterPro:IPR027026 Pfam:PF00622 Pfam:PF02037 PROSITE:PS50800
SMART:SM00513 GO:GO:0005634 GO:GO:0003676 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:1.10.720.30 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GeneTree:ENSGT00390000020210 CTD:221092 OMA:DYEYNRY
PANTHER:PTHR12381:SF12 EMBL:FP312617 RefSeq:XP_003353867.1
Ensembl:ENSSSCT00000030161 GeneID:100620658 KEGG:ssc:100620658
Uniprot:I3LUR1
Length = 747
Score = 290 (107.1 bits), Expect = 8.9e-26, Sum P(2) = 8.9e-26
Identities = 57/121 (47%), Positives = 86/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
+V + ++CL++L+++ +RN+ILDQ NVY S Q+RK+ + F RK +VVVP ED+
Sbjct: 512 LVQQASQCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWK 571
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
RLE+ +E EG DDVP ++++LEMKANF LPE + +EVTY EL+ EA+ I+ +Y +
Sbjct: 572 KRLELRKEVEG-DDVP-ESIMLEMKANFSLPEKCDYMDEVTYGELEKEEAQPIVTKYKEE 629
Query: 146 A 146
A
Sbjct: 630 A 630
Score = 36 (17.7 bits), Expect = 8.9e-26, Sum P(2) = 8.9e-26
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 141 EYNKNADGTYNYPQNWNAQNW 161
EYN+ D Y ++W QN+
Sbjct: 708 EYNRYRDYYRQYNRDW--QNY 726
>UNIPROTKB|F1P8K1 [details] [associations]
symbol:HNRNPUL2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR003034
InterPro:IPR003877 InterPro:IPR027026 Pfam:PF00622 Pfam:PF02037
PROSITE:PS50800 SMART:SM00513 GO:GO:0005634 GO:GO:0003676
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:1.10.720.30
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GeneTree:ENSGT00390000020210 CTD:221092 PANTHER:PTHR12381:SF12
EMBL:AAEX03011663 RefSeq:XP_533261.3 Ensembl:ENSCAFT00000024843
GeneID:476053 KEGG:cfa:476053 Uniprot:F1P8K1
Length = 748
Score = 290 (107.1 bits), Expect = 8.9e-26, Sum P(2) = 8.9e-26
Identities = 57/121 (47%), Positives = 86/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
+V + ++CL++L+++ +RN+ILDQ NVY S Q+RK+ + F RK +VVVP ED+
Sbjct: 512 LVQQASQCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWK 571
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
RLE+ +E EG DDVP ++++LEMKANF LPE + +EVTY EL+ EA+ I+ +Y +
Sbjct: 572 KRLELRKEVEG-DDVP-ESIMLEMKANFSLPEKCDYMDEVTYGELEKEEAQPIVTKYKEE 629
Query: 146 A 146
A
Sbjct: 630 A 630
Score = 36 (17.7 bits), Expect = 8.9e-26, Sum P(2) = 8.9e-26
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 141 EYNKNADGTYNYPQNWNAQNW 161
EYN+ D Y ++W QN+
Sbjct: 708 EYNRYRDYYRQYNRDW--QNY 726
>UNIPROTKB|Q1KMD3 [details] [associations]
symbol:HNRNPUL2 "Heterogeneous nuclear ribonucleoprotein
U-like protein 2" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003034
InterPro:IPR003877 InterPro:IPR027026 Pfam:PF00622 Pfam:PF02037
PROSITE:PS50800 SMART:SM00513 GO:GO:0005634 GO:GO:0003676
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:1.10.720.30
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
eggNOG:NOG297571 HOVERGEN:HBG061101 HOGENOM:HOG000253920
EMBL:DQ470474 EMBL:AL834470 IPI:IPI00456887 RefSeq:NP_001073027.1
UniGene:Hs.657058 ProteinModelPortal:Q1KMD3 SMR:Q1KMD3
IntAct:Q1KMD3 STRING:Q1KMD3 PhosphoSite:Q1KMD3 DMDM:121940728
PaxDb:Q1KMD3 PeptideAtlas:Q1KMD3 PRIDE:Q1KMD3 DNASU:221092
Ensembl:ENST00000301785 GeneID:221092 KEGG:hsa:221092
UCSC:uc001nuw.3 CTD:221092 GeneCards:GC11M062482 HGNC:HGNC:25451
HPA:HPA041632 neXtProt:NX_Q1KMD3 PharmGKB:PA162391554
InParanoid:Q1KMD3 OMA:DYEYNRY OrthoDB:EOG4N30NM ChiTaRS:HNRNPUL2
GenomeRNAi:221092 NextBio:91196 PMAP-CutDB:Q1KMD3 Bgee:Q1KMD3
CleanEx:HS_HNRNPUL2 Genevestigator:Q1KMD3 PANTHER:PTHR12381:SF12
Uniprot:Q1KMD3
Length = 747
Score = 290 (107.1 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 57/121 (47%), Positives = 86/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
+V + ++CL++L+++ +RN+ILDQ NVY S Q+RK+ + F RK +VVVP ED+
Sbjct: 511 LVQQASQCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWK 570
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
RLE+ +E EG DDVP ++++LEMKANF LPE + +EVTY EL+ EA+ I+ +Y +
Sbjct: 571 KRLELRKEVEG-DDVP-ESIMLEMKANFSLPEKCDYMDEVTYGELEKEEAQPIVTKYKEE 628
Query: 146 A 146
A
Sbjct: 629 A 629
Score = 35 (17.4 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 141 EYNKNADGTYNYPQNWNA 158
EYN+ D Y ++W +
Sbjct: 707 EYNRYRDYYRQYNRDWQS 724
>UNIPROTKB|F1NM96 [details] [associations]
symbol:HNRNPU "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003877 InterPro:IPR026745 Pfam:PF00622 GO:GO:0005634
InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GeneTree:ENSGT00390000020210 PANTHER:PTHR12381:SF11
EMBL:AADN02011778 EMBL:AADN02011777 IPI:IPI00578390
Ensembl:ENSGALT00000031877 Uniprot:F1NM96
Length = 602
Score = 297 (109.6 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 56/123 (45%), Positives = 86/123 (69%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
++ + +CL + +E+ ++RN+ILDQTNV +AQ+RKM + GFQRKA+VV P +EDY
Sbjct: 329 LLQRAPQCLGKFIEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYK 388
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKA--NFKLPEVGELFEEVTYIELQHPEAEKIIDEYN 143
R + E EGKD P++ +L+MK NF LPEV E F+E+ Y+ELQ EA+K++++Y
Sbjct: 389 QRTQKKAEVEGKD--LPEHAVLKMKVIGNFTLPEVAECFDEIIYVELQKEEAQKLLEQYK 446
Query: 144 KNA 146
+ +
Sbjct: 447 EES 449
>UNIPROTKB|H3BQZ7 [details] [associations]
symbol:hCG_2044799 "Uncharacterized protein" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003034
InterPro:IPR003877 InterPro:IPR027026 Pfam:PF00622 Pfam:PF02037
PROSITE:PS50800 SMART:SM00513 GO:GO:0005634 EMBL:AP001160
EMBL:CH471076 GO:GO:0003676 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:1.10.720.30 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 EMBL:AP001458 PANTHER:PTHR12381:SF12
SMR:H3BQZ7 Ensembl:ENST00000403734 Uniprot:H3BQZ7
Length = 746
Score = 290 (107.1 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 57/121 (47%), Positives = 86/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
+V + ++CL++L+++ +RN+ILDQ NVY S Q+RK+ + F RK +VVVP ED+
Sbjct: 511 LVQQASQCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWK 570
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
RLE+ +E EG DDVP ++++LEMKANF LPE + +EVTY EL+ EA+ I+ +Y +
Sbjct: 571 KRLELRKEVEG-DDVP-ESIMLEMKANFSLPEKCDYMDEVTYGELEKEEAQPIVTKYKEE 628
Query: 146 A 146
A
Sbjct: 629 A 629
>UNIPROTKB|E1BNQ9 [details] [associations]
symbol:HNRNPUL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR003877
InterPro:IPR027026 Pfam:PF00622 Pfam:PF02037 PROSITE:PS50800
SMART:SM00513 GO:GO:0005634 GO:GO:0003676 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:1.10.720.30 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GeneTree:ENSGT00390000020210 CTD:221092 OMA:DYEYNRY
PANTHER:PTHR12381:SF12 EMBL:DAAA02063486 IPI:IPI00700324
RefSeq:NP_001193174.1 UniGene:Bt.7899 Ensembl:ENSBTAT00000003261
GeneID:616476 KEGG:bta:616476 NextBio:20900148 Uniprot:E1BNQ9
Length = 749
Score = 290 (107.1 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 57/121 (47%), Positives = 86/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
+V + ++CL++L+++ +RN+ILDQ NVY S Q+RK+ + F RK +VVVP ED+
Sbjct: 512 LVQQASQCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWK 571
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
RLE+ +E EG DDVP ++++LEMKANF LPE + +EVTY EL+ EA+ I+ +Y +
Sbjct: 572 KRLELRKEVEG-DDVP-ESIMLEMKANFSLPEKCDYMDEVTYGELEKEEAQPIVTKYKEE 629
Query: 146 A 146
A
Sbjct: 630 A 630
>UNIPROTKB|J9PAS2 [details] [associations]
symbol:HNRNPUL2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR003034
InterPro:IPR003877 InterPro:IPR027026 Pfam:PF00622 Pfam:PF02037
PROSITE:PS50800 SMART:SM00513 GO:GO:0005634 GO:GO:0003676
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:1.10.720.30
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GeneTree:ENSGT00390000020210 OMA:DYEYNRY PANTHER:PTHR12381:SF12
EMBL:AAEX03011663 Ensembl:ENSCAFT00000044418 Uniprot:J9PAS2
Length = 762
Score = 290 (107.1 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 57/121 (47%), Positives = 86/121 (71%)
Query: 26 VVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYL 85
+V + ++CL++L+++ +RN+ILDQ NVY S Q+RK+ + F RK +VVVP ED+
Sbjct: 512 LVQQASQCLSKLVQIASRTKRNFILDQCNVYNSGQRRKLLLFKTFSRKVVVVVPNEEDWK 571
Query: 86 ARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEYNKN 145
RLE+ +E EG DDVP ++++LEMKANF LPE + +EVTY EL+ EA+ I+ +Y +
Sbjct: 572 KRLELRKEVEG-DDVP-ESIMLEMKANFSLPEKCDYMDEVTYGELEKEEAQPIVTKYKEE 629
Query: 146 A 146
A
Sbjct: 630 A 630
>ZFIN|ZDB-GENE-030131-6422 [details] [associations]
symbol:hnrnpub "heterogeneous nuclear
ribonucleoprotein Ub" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR003034 InterPro:IPR003877 InterPro:IPR026745
Pfam:PF00622 Pfam:PF02037 PROSITE:PS50800 SMART:SM00513
ZFIN:ZDB-GENE-030131-6422 GO:GO:0005634 GO:GO:0003676
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:1.10.720.30 GO:GO:0030529
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
HOVERGEN:HBG061101 GeneTree:ENSGT00390000020210
HOGENOM:HOG000253920 KO:K12888 PANTHER:PTHR12381:SF11 EMBL:BX470246
IPI:IPI00481810 RefSeq:NP_001028767.2 UniGene:Dr.75178 SMR:Q5RHQ7
Ensembl:ENSDART00000122696 GeneID:334490 KEGG:dre:334490 CTD:334490
InParanoid:Q5RHQ7 Uniprot:Q5RHQ7
Length = 796
Score = 278 (102.9 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 57/116 (49%), Positives = 83/116 (71%)
Query: 34 LNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYLARLEMHRE 93
L +L+E+ ++R+YILDQTNV +AQ+RKM + GFQRKA+VV PT+E+ R + E
Sbjct: 480 LGKLIEIAARKKRHYILDQTNVSSAAQRRKMCLFAGFQRKAVVVFPTDENLKERAQKKAE 539
Query: 94 KEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQHPEAEKIIDEY---NKNA 146
+GKD P++ +L+MKA + LPE G+ F EVTY+ELQ EA K++++Y +KNA
Sbjct: 540 ADGKDI--PEHALLKMKALYTLPEQGDCFSEVTYVELQKDEASKLLEKYKEESKNA 593
Score = 35 (17.4 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 143 NKNADGTYNYPQNWNAQNW 161
NKN+ + Q+W W
Sbjct: 764 NKNSSFAQAFNQSWQQGFW 782
>UNIPROTKB|I3LU51 [details] [associations]
symbol:HNRNPUL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019899 "enzyme binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0009615 "response to virus"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR003034
InterPro:IPR003877 InterPro:IPR027025 Pfam:PF00622 Pfam:PF02037
PROSITE:PS50800 SMART:SM00513 GO:GO:0005634 GO:GO:0003676
GO:GO:0009615 GO:GO:0006396 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:1.10.720.30 InterPro:IPR001870 InterPro:IPR018355
SMART:SM00449 PROSITE:PS50188 OMA:SGPDGHY PANTHER:PTHR12381:SF10
GeneTree:ENSGT00390000020210 EMBL:FP700139
Ensembl:ENSSSCT00000025796 Uniprot:I3LU51
Length = 865
Score = 282 (104.3 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 60/133 (45%), Positives = 86/133 (64%)
Query: 14 PLRDHIKGSWVQVVDKTTKCL--NRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQ 71
P + I W +V +C+ +R + N+ L++TNVY SAQ+RKMR + GFQ
Sbjct: 475 PRQRLIFSEWKLLVVTALRCVLEHRSVPAPAQDAPNHHLEETNVYGSAQRRKMRPFEGFQ 534
Query: 72 RKAIVVVPTNEDYLARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIELQ 131
RKAIV+ PT+ED R ++EGKD PD+ +LEMKANF LP+VG+ +EV +IELQ
Sbjct: 535 RKAIVICPTDEDLKDRTIKRTDEEGKD--VPDHAVLEMKANFTLPDVGDFLDEVLFIELQ 592
Query: 132 HPEAEKIIDEYNK 144
EA+K++ +YN+
Sbjct: 593 REEADKLVRQYNE 605
>ZFIN|ZDB-GENE-030131-3731 [details] [associations]
symbol:hnrnpua "heterogeneous nuclear
ribonucleoprotein Ua" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR003034 InterPro:IPR003877
InterPro:IPR026745 Pfam:PF00622 Pfam:PF02037 PROSITE:PS50800
SMART:SM00513 ZFIN:ZDB-GENE-030131-3731 GO:GO:0005634 GO:GO:0003676
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:1.10.720.30
InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188
GeneTree:ENSGT00390000020210 KO:K12888 PANTHER:PTHR12381:SF11
EMBL:CU076099 IPI:IPI00495050 RefSeq:XP_694691.5 UniGene:Dr.155863
UniGene:Dr.77064 Ensembl:ENSDART00000020598 GeneID:566326
KEGG:dre:566326 CTD:566326 NextBio:20888130 Uniprot:E7F3J2
Length = 760
Score = 250 (93.1 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 54/143 (37%), Positives = 85/143 (59%)
Query: 4 EYKLVSINSEPLRDHIKGSWVQVVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRK 63
E ++S ++D K +++ + L + +E+ ++RNYILDQTNV SA+KRK
Sbjct: 444 EKMMISTLKRQMKDVTK--LLEISLRAPLFLGKFIEIAARKKRNYILDQTNVSASARKRK 501
Query: 64 MRSYFGFQRKAIVVVPTNEDYLARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFE 123
M + GFQRKA+VV PT+E+Y R E +GK P+ I + K + LP G+ F
Sbjct: 502 MCLFAGFQRKAVVVCPTDEEYKKRTLKKAETDGKK--VPEQAIRKTKRIYSLPVEGDCFS 559
Query: 124 EVTYIELQHPEAEKIIDEYNKNA 146
EV Y+ELQ E K++++Y +++
Sbjct: 560 EVLYVELQKEEVAKLLEQYKEDS 582
>ZFIN|ZDB-GENE-081107-3 [details] [associations]
symbol:si:ch211-107m4.1 "si:ch211-107m4.1"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003034 InterPro:IPR003877 InterPro:IPR027026
Pfam:PF00622 Pfam:PF02037 PROSITE:PS50800 SMART:SM00513
ZFIN:ZDB-GENE-081107-3 GO:GO:0005634 GO:GO:0003676
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:1.10.720.30
InterPro:IPR018355 SMART:SM00449 GeneTree:ENSGT00390000020210
PANTHER:PTHR12381:SF12 EMBL:CT573285 IPI:IPI00774386
ProteinModelPortal:E7F676 Ensembl:ENSDART00000079385
ArrayExpress:E7F676 Bgee:E7F676 Uniprot:E7F676
Length = 716
Score = 247 (92.0 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 52/145 (35%), Positives = 92/145 (63%)
Query: 5 YKLVSINS--EPLRDHIKGSWVQVV-DKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQK 61
Y L+S NS +R+ + +++ + T+C+++L+++ +++RNYILDQ N+Y SAQ+
Sbjct: 481 YDLLSTNSILNCMREPTGANHRELMLQQATQCVSQLIKIAAAKKRNYILDQANIYPSAQR 540
Query: 62 RKMRSYFGFQRKAIVVVPTNEDYLARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGEL 121
KM + G+QRKA+VV P +E + +RL +E+EG + +L+ K +F +P G+
Sbjct: 541 HKMLCFHGYQRKAVVVFPPDEVWRSRLVQRQEQEGI--AVQETSLLKAKVSFTVPVQGQH 598
Query: 122 FEEVTYIELQHPEAEKIIDEYNKNA 146
EEV ++EL EA K++ +Y + A
Sbjct: 599 LEEVMFVELNSEEALKLLTQYKEEA 623
>FB|FBgn0050122 [details] [associations]
symbol:CG30122 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] InterPro:IPR003034 InterPro:IPR003877
Pfam:PF00622 Pfam:PF02037 PROSITE:PS50800 SMART:SM00513
EMBL:AE013599 GO:GO:0003676 InterPro:IPR008985 SUPFAM:SSF49899
Gene3D:1.10.720.30 GO:GO:0071011 GO:GO:0000398 InterPro:IPR001870
PROSITE:PS50188 GeneTree:ENSGT00390000020210 UniGene:Dm.12100
GeneID:37146 KEGG:dme:Dmel_CG30122 FlyBase:FBgn0050122
GenomeRNAi:37146 NextBio:802174 RefSeq:NP_001163196.1
ProteinModelPortal:E1JGL8 SMR:E1JGL8 EnsemblMetazoa:FBtr0300923
OMA:YEICLNS PhylomeDB:E1JGL8 Bgee:E1JGL8 Uniprot:E1JGL8
Length = 1272
Score = 229 (85.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 51/127 (40%), Positives = 77/127 (60%)
Query: 20 KGSWVQVVDKTTKCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVP 79
KG W +V + L L ++ RRRN+ILDQTNVY SAQ+RKM+ + F+R A+V +P
Sbjct: 760 KGRWDKVYEICLNSLAALEDIAMKRRRNFILDQTNVYASAQRRKMKGFNDFKRIAVVCIP 819
Query: 80 TNEDYLARLEMHREKEGKDDVPPDNVILEMKANFKLP--EVGELFEEVTYIELQHPEAEK 137
+ ED L R +E++G ++ I ++ANF LP E G F+++ Y EL EA+
Sbjct: 820 S-EDELKRRIAEKEEKGNAFTVKESTINNLRANFTLPSLEFG-WFDDINYTELTGDEAKS 877
Query: 138 IIDEYNK 144
+ +YN+
Sbjct: 878 EVKKYNE 884
>WB|WBGene00012769 [details] [associations]
symbol:Y41E3.11 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0019915
"lipid storage" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
InterPro:IPR003034 InterPro:IPR003877 Pfam:PF00622 SMART:SM00513
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0019915 GO:GO:0007281
GO:GO:0040020 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 EMBL:Z95559 eggNOG:NOG297571
GeneTree:ENSGT00390000020210 RefSeq:NP_001255853.1
ProteinModelPortal:B9WRU1 SMR:B9WRU1 STRING:B9WRU1 PaxDb:B9WRU1
EnsemblMetazoa:Y41E3.11a GeneID:178421 KEGG:cel:CELE_Y41E3.11
CTD:178421 WormBase:Y41E3.11a HOGENOM:HOG000015819 OMA:NGVPRIR
ArrayExpress:B9WRU1 Uniprot:B9WRU1
Length = 1667
Score = 154 (59.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 37/100 (37%), Positives = 59/100 (59%)
Query: 32 KCLNRLLELGFSRRRNYILDQTNVYVSAQKRKMRSYFGFQRKAIVVVPTNEDYLARLEMH 91
K +NRL+ L RR+NYILD TN + +KRK+ ++ F RK ++ VP + + RL +
Sbjct: 1232 KSMNRLILLAPRRRKNYILDMTNCFAEKRKRKLMAFEEFNRKCMLFVPDEDTHQKRL-IK 1290
Query: 92 REKEGKDDVPPDNVILEMKANFKLPEV--GELFEEVTYIE 129
+E E + + D +++ KA LP V GE EE+ +I+
Sbjct: 1291 QEHEENEKLDTD-AMMQHKAAMSLPIVAEGEPCEELIFID 1329
>UNIPROTKB|F1NM97 [details] [associations]
symbol:HNRNPU "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR026745 GO:GO:0005634 GeneTree:ENSGT00390000020210
PANTHER:PTHR12381:SF11 EMBL:AADN02011778 EMBL:AADN02011777
IPI:IPI00683383 Ensembl:ENSGALT00000031876 Uniprot:F1NM97
Length = 49
Score = 113 (44.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 79 PTNEDYLARLEMHREKEGKDDVPPDNVILEMKANFKLPEVGELFEEVTYIE 129
P +EDY R + E EGKD P++ +L + NF LPEV E F+E+ Y+E
Sbjct: 1 PKDEDYKQRTQKKAEVEGKD--LPEHAMLNTQWNFTLPEVAECFDEIIYVE 49
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 226 203 0.00092 111 3 11 22 0.36 33
31 0.46 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 597 (63 KB)
Total size of DFA: 184 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.10u 0.09s 18.19t Elapsed: 00:00:01
Total cpu time: 18.11u 0.09s 18.20t Elapsed: 00:00:01
Start: Thu Aug 15 13:36:40 2013 End: Thu Aug 15 13:36:41 2013