RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7616
(147 letters)
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 72.1 bits (176), Expect = 3e-18
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 8 PPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEK 67
P P + V++G +T+ CK +G P P+++WS L G ++ + ++
Sbjct: 2 APKYEQKPEK-VIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSGLVIKG 60
Query: 68 VDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
V G Y C ATN GD + ++V
Sbjct: 61 VKNGDKGYYGCRATNEHGD-KYFETLVQV 88
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 70.3 bits (171), Expect = 2e-17
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 7 VPPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKS-------LE 59
VPP+++ S T G ++TL C A G P P++ W+K + + E+ +
Sbjct: 2 VPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDD 61
Query: 60 GFSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVLCK 99
+T+ VD++ Y C A N G+ + L+V K
Sbjct: 62 SSELTIRNVDKNDEAEYVCIAENKAGE-QDASIHLKVFAK 100
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 65.2 bits (158), Expect = 2e-15
Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 21 TVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEK------SLEGFSITLEKVDRHQAG 74
V T+ C A GNP+P++ W K + + +S+ +E V G
Sbjct: 16 AVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKG 75
Query: 75 VYQCTATNGVGDPVTVDMTLEVL 97
Y C N G + L+V+
Sbjct: 76 NYTCVVENEYGS-INHTYHLDVV 97
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 63.3 bits (153), Expect = 1e-14
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 3/90 (3%)
Query: 7 VPPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLE 66
PSI+ G +TLEC A GNPVP I W K D S S S E + ++
Sbjct: 3 YAPSIKAKFPA-DTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSKWLSSEP-LLHIQ 60
Query: 67 KVDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
VD G Y+C A N G T + +
Sbjct: 61 NVDFEDEGTYECEAENIKGR-DTYQGRIII 89
Score = 33.6 bits (76), Expect = 0.002
Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 22/107 (20%)
Query: 40 PSIIWSKKDSSLPSGEKSLEGFSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVLCK 99
PSI + P+ +L G +TLE C A G+PV ++
Sbjct: 5 PSIK-----AKFPADTYALTGQMVTLE-----------CFAF---GNPVPQIKWRKLDGS 45
Query: 100 ILPSGEKSLEGFSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 146
+ + ++ VD G Y+C A N G T + +
Sbjct: 46 QTS--KWLSSEPLLHIQNVDFEDEGTYECEAENIKGR-DTYQGRIII 89
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 62.2 bits (150), Expect = 4e-14
Identities = 23/99 (23%), Positives = 35/99 (35%), Gaps = 8/99 (8%)
Query: 9 PSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGE-----KSLEGFSI 63
P I P + VR G ++ L K +G + W K + E S G +
Sbjct: 1 PQIIQFPED--QKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKL 58
Query: 64 TLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVLCKILP 102
T+ + G Y N +G + L V+ K P
Sbjct: 59 TILAARQEHCGCYTLLVENKLGS-RQAQVNLTVVDKPDP 96
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 59.2 bits (142), Expect = 4e-13
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPS-------GEKSLEGFSITLE 66
+P LTV +G + L C G P I W K + + + + ++L+
Sbjct: 2 APVK--LTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLK 59
Query: 67 KVDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
V+R AG Y C +G ++ + L V
Sbjct: 60 SVERSDAGRYWCQVEDGGETEISQPVWLTV 89
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 59.5 bits (143), Expect = 4e-13
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Query: 8 PPSIRTSPSNGQLTVRKGG---TITLECKASGNPVPSIIWSKKDSSLPSGEKS----LEG 60
P P++ +G +TL C+A NP + W + L G S + G
Sbjct: 4 GPVFEEQPAH--TLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAG 61
Query: 61 FSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTL 94
+ V AG YQC ATN G V+ + +L
Sbjct: 62 DLVISNPVKAKDAGSYQCVATNARGTVVSREASL 95
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 58.1 bits (139), Expect = 9e-13
Identities = 23/90 (25%), Positives = 34/90 (37%), Gaps = 9/90 (10%)
Query: 8 PPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEK 67
P + G T + T C+A GNP+P + K +
Sbjct: 2 GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPL--------PIGESVT 53
Query: 68 VDRHQAGVYQCTATNGVGDPVTVDMTLEVL 97
V R G Y C A + G+ VT ++T+ VL
Sbjct: 54 VTRDLEGTYLCRARSTQGE-VTREVTVNVL 82
Score = 26.9 bits (58), Expect = 0.40
Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 111 FSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVL 147
V R G Y C A + G+ VT ++T+ VL
Sbjct: 47 PIGESVTVTRDLEGTYLCRARSTQGE-VTREVTVNVL 82
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 57.6 bits (138), Expect = 2e-12
Identities = 18/100 (18%), Positives = 29/100 (29%), Gaps = 9/100 (9%)
Query: 6 MVPPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEK------SLE 59
M P I + TV +G + G P P W K + ++
Sbjct: 2 MEAPKIFERIQS--QTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDN 59
Query: 60 GFSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVLCK 99
+ + V + A N G+ + L V K
Sbjct: 60 VCELVIRDVTGEDSASIMVKAINIAGE-TSSHAFLLVQAK 98
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 57.6 bits (138), Expect = 2e-12
Identities = 19/100 (19%), Positives = 31/100 (31%), Gaps = 12/100 (12%)
Query: 5 QMVPPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDS-------SLPSGEKS 57
+ VP + + + G + C NP+ + K +
Sbjct: 3 EPVPQYVSKD-----MMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNR 57
Query: 58 LEGFSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVL 97
G + + GVY C NGVG P + L V+
Sbjct: 58 TSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVV 97
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 56.8 bits (136), Expect = 3e-12
Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 8/91 (8%)
Query: 11 IRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWS-----KKDSSLPSGEKSLEGFSITL 65
I T P + +TV +G + C G PVP++ W S+ + + +
Sbjct: 2 ILTKPRS--MTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEI 59
Query: 66 EKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
V G Y N G + TL +
Sbjct: 60 SSVQASDEGNYSVVVENSEGK-QEAEFTLTI 89
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 57.4 bits (137), Expect = 4e-12
Identities = 25/143 (17%), Positives = 44/143 (30%), Gaps = 20/143 (13%)
Query: 8 PPSIRTSPSNGQ---LTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSIT 64
PP I + V G + L+ SG+P P++IW K + +
Sbjct: 4 PPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPE 63
Query: 65 LEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVLCKILPSGEKSLEGFSITLEKVDRHQAG 124
+ V + +E ++ G
Sbjct: 64 DTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFT----------------VEGAEKEDEG 107
Query: 125 VYQCTATNGVGDPVTVDMTLEVL 147
VY T N VG+ V++T++V+
Sbjct: 108 VYTVTVKNPVGE-DQVNLTVKVI 129
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 56.4 bits (135), Expect = 4e-12
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 4/89 (4%)
Query: 9 PSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPS-GEKSLEGFSITLEK 67
P ++ G + C ASG P P++ W + L S + G + K
Sbjct: 2 PDWLDVITD--TEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSK 59
Query: 68 VDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
+ +G+YQC A N G V L V
Sbjct: 60 LVLEDSGMYQCVAENKHGT-VYASAELTV 87
Score = 32.9 bits (74), Expect = 0.003
Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Query: 77 QCTATNGVGDPVTVDMTLEVLCKILPSGEKSLEGFSITLEKVDRHQAGVYQCTATNGVGD 136
C A+ G P L + + G + K+ +G+YQC A N G
Sbjct: 22 SCVAS---GKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGT 78
Query: 137 PVTVDMTLEV 146
V L V
Sbjct: 79 -VYASAELTV 87
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 56.1 bits (134), Expect = 9e-12
Identities = 24/108 (22%), Positives = 31/108 (28%), Gaps = 21/108 (19%)
Query: 8 PPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKS---------- 57
P P+N + GG + CK + P I W K S
Sbjct: 5 PILQAGLPAN--ASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLK 62
Query: 58 --------LEGFSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVL 97
E + + V AG Y C A N +G L VL
Sbjct: 63 AAGVNTTDKEIEVLYIRNVTFEDAGEYTCLAGNSIGI-SFHSAWLTVL 109
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 55.7 bits (133), Expect = 1e-11
Identities = 21/99 (21%), Positives = 32/99 (32%), Gaps = 8/99 (8%)
Query: 9 PSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEK-----SLEGFSI 63
P P V +G + C+ + P + W K D L K + + +
Sbjct: 2 PRFIVKPYG--TEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGL 59
Query: 64 TLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVLCKILP 102
T+ +V G Y A N G + L V P
Sbjct: 60 TINRVKGDDKGEYTVRAKNSYGT-KEEIVFLNVTRHSEP 97
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 55.0 bits (131), Expect = 2e-11
Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Query: 8 PPSIRTSPSNGQLTVRKGGTITLECKA-SGNPVPSIIWSKKDSSLPSGEKSLEGFSITLE 66
P + Q +VR G +T C A S +P +++W++ + +T+
Sbjct: 1 PIMVTVEEQRSQ-SVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFNGILTIR 59
Query: 67 KVDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
V AG Y CT +N TL V
Sbjct: 60 NVQPSDAGTYVCTGSNMFAM-DQGTATLHV 88
Score = 29.6 bits (65), Expect = 0.048
Identities = 16/79 (20%), Positives = 22/79 (27%), Gaps = 4/79 (5%)
Query: 68 VDRHQAGVYQCTATNGVGDPVTVDMTLEVLCKILPSGEKSLEGFSITLEKVDRHQAGVYQ 127
V + CTA + + L +T+ V AG Y
Sbjct: 14 VRPGADVTFICTAKSKSPAY---TLVWTRLHNGKLPSRAMDFNGILTIRNVQPSDAGTYV 70
Query: 128 CTATNGVGDPVTVDMTLEV 146
CT +N TL V
Sbjct: 71 CTGSNMFAM-DQGTATLHV 88
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)
[TaxId: 9103]}
Length = 102
Score = 54.9 bits (131), Expect = 2e-11
Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 9/96 (9%)
Query: 7 VPPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGF----- 61
V P + + + V +G +CK G P P ++W K D+ + +
Sbjct: 7 VKPYFTKTILD--MEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGN 64
Query: 62 -SITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
S+T+ +V Y C A N +G+ T L V
Sbjct: 65 CSLTISEVCGDDDAKYTCKAVNSLGE-ATCTAELLV 99
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 52.7 bits (125), Expect = 2e-10
Identities = 22/105 (20%), Positives = 35/105 (33%), Gaps = 17/105 (16%)
Query: 7 VPPSIRTSPSNGQLTVRKGGTITLECKAS-GNPVPSIIWSKKDSSLPSGEKS-------- 57
VPPS T +V G L C G+P W K S+ + +
Sbjct: 1 VPPSKPTISVPS--SVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNS 58
Query: 58 -----LEGFSITLEKVDRHQAGVYQCTATNGVGDPVTVDM-TLEV 96
+ + + V +G Y C A NG G + + ++
Sbjct: 59 SFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDA 103
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 51.8 bits (123), Expect = 2e-10
Identities = 15/93 (16%), Positives = 33/93 (35%), Gaps = 7/93 (7%)
Query: 9 PSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEK----SLEGFSIT 64
+ +P+ ++G + C + P+IIW K + + L +
Sbjct: 2 LMFKNAPTP--QEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQ 59
Query: 65 LEKVDRHQAGVYQCTATNGV-GDPVTVDMTLEV 96
+ + + G Y+C G+ D+ + V
Sbjct: 60 IRGIKKTDEGTYRCEGRILARGEINFKDIQVIV 92
Score = 26.0 bits (56), Expect = 0.97
Identities = 6/35 (17%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 113 ITLEKVDRHQAGVYQCTATNGV-GDPVTVDMTLEV 146
+ + + + G Y+C G+ D+ + V
Sbjct: 58 LQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIV 92
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 51.9 bits (123), Expect = 3e-10
Identities = 23/104 (22%), Positives = 33/104 (31%), Gaps = 16/104 (15%)
Query: 7 VPPSIRTSPSNGQLTVRKGGTITLECKA-SGNPVPSIIWSKKDSSLPSGEKS-------- 57
VPPS T + G L C G+P W K +P+ KS
Sbjct: 1 VPPSKPTVNIPS--SATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSS 58
Query: 58 ----LEGFSITLEKVDRHQAGVYQCTATNGVG-DPVTVDMTLEV 96
+ + + G Y C A NG G + + +E
Sbjct: 59 YVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 102
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 50.4 bits (119), Expect = 9e-10
Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 8/95 (8%)
Query: 7 VPPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIW-----SKKDSSLPSGEKSLEGF 61
+ P I T+ + ++ G T LE G P P+ W + +
Sbjct: 1 LKPKILTASRK--IKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTT 58
Query: 62 SITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
SI R +G Y+ N +G+ + V
Sbjct: 59 SIFFPSAKRADSGNYKLKVKNELGE-DEAIFEVIV 92
Score = 24.2 bits (51), Expect = 4.6
Identities = 5/26 (19%), Positives = 10/26 (38%), Gaps = 1/26 (3%)
Query: 121 HQAGVYQCTATNGVGDPVTVDMTLEV 146
+G Y+ N +G+ + V
Sbjct: 68 ADSGNYKLKVKNELGE-DEAIFEVIV 92
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 50.4 bits (119), Expect = 1e-09
Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 7/94 (7%)
Query: 8 PPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKK-----DSSLPSGEKSLEGFS 62
P ++ P+ + R+ LEC GN KK + + + S
Sbjct: 2 YPVLKDQPAE--VLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGS 59
Query: 63 ITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
+ + G YQC A G + ++
Sbjct: 60 LVFLRPQASDEGHYQCFAETPAGVASSRVISFRK 93
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 50.0 bits (118), Expect = 2e-09
Identities = 15/85 (17%), Positives = 24/85 (28%), Gaps = 8/85 (9%)
Query: 20 LTVRKGGTITLECKASGNPVPSIIWSKK--------DSSLPSGEKSLEGFSITLEKVDRH 71
+ V G T +C A G V + + S + +
Sbjct: 11 VEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKR 70
Query: 72 QAGVYQCTATNGVGDPVTVDMTLEV 96
AG Y+C G ++ L V
Sbjct: 71 DAGKYRCMIRTEGGVGISNYAELVV 95
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 49.3 bits (116), Expect = 3e-09
Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 16/102 (15%)
Query: 8 PPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSII------------WSKKDSSLPSGE 55
PP ++ S+ + +G T L CK+ P + S
Sbjct: 2 PPRVKAVKSS--EHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVS 59
Query: 56 KSLEGFSITLEKVDRHQ-AGVYQCTATNGVGDPVTVDMTLEV 96
S + +E ++ G Y+C T+ G +TL V
Sbjct: 60 SSQGRSELHIENLNMEADPGQYRCNGTSSKGS-DQAIITLRV 100
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 48.7 bits (115), Expect = 6e-09
Identities = 20/94 (21%), Positives = 30/94 (31%), Gaps = 11/94 (11%)
Query: 21 TVRKGGTITLEC------KASGNPVPSIIWSKKDSSLPSGEK--SLEGFSITLEKVDRHQ 72
+ G L C K N +P + W K L S + + V
Sbjct: 10 KLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKH 69
Query: 73 AGVYQCTATN---GVGDPVTVDMTLEVLCKILPS 103
G Y C A+ G P+T + L + P+
Sbjct: 70 RGNYTCHASYTYLGKQYPITRVIEFITLEENKPT 103
Score = 29.8 bits (66), Expect = 0.041
Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 3/44 (6%)
Query: 107 SLEGFSITLEKVDRHQAGVYQCTATN---GVGDPVTVDMTLEVL 147
S + + V G Y C A+ G P+T + L
Sbjct: 54 SGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITL 97
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 48.4 bits (114), Expect = 6e-09
Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 7/92 (7%)
Query: 8 PPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPS---GEKSLEGFSIT 64
P+ + LT G ++TL C + + + G +
Sbjct: 6 CPAQEVARGV--LTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLL 63
Query: 65 LEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
L V H +G Y C TV + ++V
Sbjct: 64 LRSVQLHDSGNYSCYRAGRPAG--TVHLLVDV 93
Score = 31.0 bits (69), Expect = 0.015
Identities = 15/79 (18%), Positives = 22/79 (27%), Gaps = 3/79 (3%)
Query: 68 VDRHQAGVYQCTATNGVGDPVTVDMTLEVLCKILPSGEKSLEGFSITLEKVDRHQAGVYQ 127
+ C D TV L + G + L V H +G Y
Sbjct: 18 SLPGDSVTLTCPGVEP-EDNATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYS 76
Query: 128 CTATNGVGDPVTVDMTLEV 146
C TV + ++V
Sbjct: 77 CYRAGRPAG--TVHLLVDV 93
>d1fnla1 b.1.1.4 (A:3-86) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 84
Score = 45.7 bits (107), Expect = 4e-08
Identities = 16/85 (18%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 8 PPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEK 67
+ P +V + ++TL+C+ + +P + + SL S + S ++
Sbjct: 5 KAVVFLEPQW--YSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQA----SSYFIDA 58
Query: 68 VDRHQAGVYQCTATNGVG-DPVTVD 91
+ +G Y+C DPV ++
Sbjct: 59 ATVNDSGEYRCQTNLSTLSDPVQLE 83
Score = 27.6 bits (60), Expect = 0.23
Identities = 6/28 (21%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 115 LEKVDRHQAGVYQCTATNGVG-DPVTVD 141
++ + +G Y+C DPV ++
Sbjct: 56 IDAATVNDSGEYRCQTNLSTLSDPVQLE 83
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 45.4 bits (106), Expect = 9e-08
Identities = 17/88 (19%), Positives = 28/88 (31%), Gaps = 11/88 (12%)
Query: 21 TVRKGGTITLECKASGNPVPSIIWSKKDSSLPSG-----------EKSLEGFSITLEKVD 69
++ G LEC + K + EK++ F + E V
Sbjct: 14 SILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVL 73
Query: 70 RHQAGVYQCTATNGVGDPVTVDMTLEVL 97
+ G Y+C+A + TL V
Sbjct: 74 PNDNGSYRCSANFQSNLIESHSTTLYVT 101
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 43.8 bits (102), Expect = 3e-07
Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Query: 19 QLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEKVDRHQAGVYQC 78
L ++G TI L C + + + ++ S + ++ + + +G Y C
Sbjct: 9 HLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKF--SRSDPNFSIPQANHSHSGDYHC 66
Query: 79 TATNGVGDPVTVDMTLEV 96
T G + +T+ V
Sbjct: 67 TGNIGYTLYSSKPVTITV 84
Score = 27.2 bits (59), Expect = 0.36
Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 8/70 (11%)
Query: 85 GDPVTVDMTLE--------VLCKILPSGEKSLEGFSITLEKVDRHQAGVYQCTATNGVGD 136
G+ + + + S + S + ++ + + +G Y CT G
Sbjct: 15 GETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSIPQANHSHSGDYHCTGNIGYTL 74
Query: 137 PVTVDMTLEV 146
+ +T+ V
Sbjct: 75 YSSKPVTITV 84
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 43.6 bits (102), Expect = 4e-07
Identities = 15/73 (20%), Positives = 24/73 (32%), Gaps = 8/73 (10%)
Query: 20 LTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEK-------SLEGFSITLEKVDRHQ 72
T G + LEC+ S ++ W K + G K + + +E +
Sbjct: 10 TTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKAD 68
Query: 73 AGVYQCTATNGVG 85
A Y T G
Sbjct: 69 AAEYSVMTTGGQS 81
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor
tyro3, second domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 85
Score = 43.0 bits (100), Expect = 5e-07
Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 5/88 (5%)
Query: 9 PSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEKV 68
P P + L V L C+A G P P I + ++ G L
Sbjct: 2 PFFTVEPKD--LAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGP---APSPSVLNVT 56
Query: 69 DRHQAGVYQCTATNGVGDPVTVDMTLEV 96
Q+ ++ C A N G + T+ +
Sbjct: 57 GVTQSTMFSCEAHNLKGLASSRTATVHL 84
Score = 28.0 bits (61), Expect = 0.17
Identities = 7/38 (18%), Positives = 13/38 (34%)
Query: 109 EGFSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 146
L Q+ ++ C A N G + T+ +
Sbjct: 47 APSPSVLNVTGVTQSTMFSCEAHNLKGLASSRTATVHL 84
>d1gsma1 b.1.1.4 (A:1-90) Mucosal addressin cell adhesion
molecule-1 (MADCAM-1) {Human (Homo sapiens) [TaxId:
9606]}
Length = 90
Score = 42.4 bits (98), Expect = 9e-07
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 7 VPPSIRTSPSNGQLTVRKGGTITLECK-ASGNPVPSIIWSKKDSSLPSGEKSLEGFSITL 65
V P P + V G + L C+ A + S+ W D+SL + + +T+
Sbjct: 1 VKPLQVEPPEP-VVAVALGASRQLTCRLACADRGASVQWRGLDTSLGAVQSDTGRSVLTV 59
Query: 66 EKVDRHQAGVYQCTATNGVGDPVTVDMTLEVL 97
AG C + G T T+++L
Sbjct: 60 RNASLSAAGTRVCVGSCGGR---TFQHTVQLL 88
Score = 24.7 bits (52), Expect = 2.7
Identities = 7/30 (23%), Positives = 11/30 (36%), Gaps = 3/30 (10%)
Query: 118 VDRHQAGVYQCTATNGVGDPVTVDMTLEVL 147
AG C + G T T+++L
Sbjct: 62 ASLSAAGTRVCVGSCGGR---TFQHTVQLL 88
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 42.6 bits (99), Expect = 1e-06
Identities = 12/84 (14%), Positives = 24/84 (28%), Gaps = 7/84 (8%)
Query: 7 VPPSIRTSPSNGQLTVRKGGTITLECKASG---NPVPSIIWSKKDSSLPSGEKSLEGFSI 63
P + +P G +TL C+ G +++ + + L E +
Sbjct: 3 TPERVELAPLP--SWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPAVGEPAEV 60
Query: 64 TLE--KVDRHQAGVYQCTATNGVG 85
T H + C +
Sbjct: 61 TTTVLVRRDHHGAQFSCRTELDLR 84
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 42.6 bits (99), Expect = 1e-06
Identities = 13/83 (15%), Positives = 23/83 (27%), Gaps = 13/83 (15%)
Query: 29 TLECKASGNPVPSIIWSKKDSSLPSGE------------KSLEGFSITLEKVDRHQAGVY 76
+ G P PS+ W S L +++ + L + G Y
Sbjct: 19 CIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNY 78
Query: 77 QCTATNGVGDPVTVDMTLEVLCK 99
A N G + + +
Sbjct: 79 TLLAANPFGQ-ASASIMAAFMDN 100
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 42.1 bits (97), Expect = 2e-06
Identities = 19/104 (18%), Positives = 33/104 (31%), Gaps = 16/104 (15%)
Query: 8 PPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLP-------------SG 54
++ +S ++ + + + L C SG P + W
Sbjct: 4 SVTVHSSEP--EVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYED 61
Query: 55 EKSLEGFSITLEKVDRHQAGVYQCTATNGVGDPV-TVDMTLEVL 97
+ IT + V R G Y C + G+ V + L VL
Sbjct: 62 RVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVL 105
>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 96
Score = 41.6 bits (96), Expect = 2e-06
Identities = 18/93 (19%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
Query: 7 VPPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITL- 65
P ++ + + TV++ ++TL C ++ S + +L + L
Sbjct: 4 TQPFLQVTNT----TVKELDSVTLTCLSNDIGANIQWLFNSQSLQLTERMTLSQNNSILR 59
Query: 66 -EKVDRHQAGVYQCTATNGVGDPVTVDMTLEVL 97
+ + R AG YQC +N V + + L+++
Sbjct: 60 IDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 92
Score = 27.7 bits (60), Expect = 0.27
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 111 FSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVL 147
+ ++ + R AG YQC +N V + + L+++
Sbjct: 56 SILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 92
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 39.9 bits (92), Expect = 9e-06
Identities = 21/109 (19%), Positives = 33/109 (30%), Gaps = 15/109 (13%)
Query: 6 MVPPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSG---------EK 56
PP + S +L + +E GNP P++ W L E
Sbjct: 3 YYPPRV-VSLEEPELRLE----HCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEG 57
Query: 57 SLEGFSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVLCKILPSGE 105
+ + K + G Y A N +G + L + P E
Sbjct: 58 EISEGCLLFNKPTHYNNGNYTLIAKNPLGT-ANQTINGHFLKEPFPVDE 105
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 39.7 bits (91), Expect = 1e-05
Identities = 20/95 (21%), Positives = 28/95 (29%), Gaps = 19/95 (20%)
Query: 9 PSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEKV 68
P I SP+N + V G I L C +G W S + + L ++E
Sbjct: 2 PVI-VSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENP 60
Query: 69 D------------------RHQAGVYQCTATNGVG 85
R + C A N G
Sbjct: 61 ANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG 95
>d1fnla2 b.1.1.4 (A:87-175) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 89
Score = 39.5 bits (91), Expect = 1e-05
Identities = 11/78 (14%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Query: 19 QLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEKVDRHQAGVYQC 78
+ ++ I L C + N + ++ F I K +G Y C
Sbjct: 11 RWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIP--KATLKDSGSYFC 68
Query: 79 TATNGVGDPVTVDMTLEV 96
G + + + + +
Sbjct: 69 RGLVGSKNVSSETVNITI 86
Score = 23.7 bits (50), Expect = 5.2
Identities = 5/33 (15%), Positives = 12/33 (36%)
Query: 114 TLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 146
+ K +G Y C G + + + + +
Sbjct: 54 HIPKATLKDSGSYFCRGLVGSKNVSSETVNITI 86
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 97
Score = 39.3 bits (90), Expect = 2e-05
Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 11/95 (11%)
Query: 11 IRTSPSNGQLTVRKGGTITLECKASGNPVPSII---------WSKKDSSLPSGEKSLEGF 61
+ PS + G + C+ +G+ I S + +
Sbjct: 3 VDIVPSQ--GEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSS 60
Query: 62 SITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
++T+ + AG+Y+C T G + +++
Sbjct: 61 TLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKI 95
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 39.2 bits (90), Expect = 2e-05
Identities = 15/103 (14%), Positives = 27/103 (26%), Gaps = 16/103 (15%)
Query: 7 VPPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLP----------SGEK 56
P+I T + + GNP P++ W + L
Sbjct: 3 FAPTI-TFLESPT----SDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNH 57
Query: 57 SLEGFSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVLCK 99
+ + L+ G Y A N G ++ +
Sbjct: 58 TEYHGCLQLDNPTHMNNGDYTLIAKNEYGK-DEKQISAHFMGW 99
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 39.0 bits (89), Expect = 2e-05
Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 7/93 (7%)
Query: 8 PPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPS---GEKSLEGFSIT 64
P+++ N +V G + L C+ G + W + + L +T
Sbjct: 2 VPTLKVQVPN--ASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLT 59
Query: 65 LEKVDR-HQAGVYQCTATNGVGDPVTVDMTLEV 96
L V C A N VG V + + V
Sbjct: 60 LANVTSDLNRKNVTCWAENDVGR-AEVSVQVNV 91
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 38.7 bits (89), Expect = 2e-05
Identities = 14/94 (14%), Positives = 29/94 (30%), Gaps = 19/94 (20%)
Query: 19 QLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSG---------------EKSLEGFSI 63
Q+ G +T ++ P+ ++W K+ + S+
Sbjct: 4 QIYGVVYGNVTFHVPSN-VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSL 62
Query: 64 TLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVL 97
T+ + Y+ + N T+ L VL
Sbjct: 63 TIYNLTSSDEDEYEMESPNITD---TMKFFLYVL 93
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 38.3 bits (88), Expect = 3e-05
Identities = 13/81 (16%), Positives = 18/81 (22%), Gaps = 8/81 (9%)
Query: 8 PPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSL----EGFSI 63
+ V KG I L + + + W K + G
Sbjct: 5 STAF-QKKLEPAYQVSKGHKIRLTVELAD-HDAEVKWLKNGQEIQMSGSKYIFESIGAKR 62
Query: 64 TLEKVDRHQ--AGVYQCTATN 82
TL YQC
Sbjct: 63 TLTISQCSLADDAAYQCVVGG 83
Score = 23.3 bits (49), Expect = 8.2
Identities = 8/68 (11%), Positives = 14/68 (20%), Gaps = 3/68 (4%)
Query: 67 KVDRHQAGVYQCTATNGVGDPVTVDMTLEVLCKILPSGEKSLEGFSITLEKVDRHQ--AG 124
+V + + + V + + G TL
Sbjct: 17 QVSKGHKIRLTVELADHDAE-VKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDA 75
Query: 125 VYQCTATN 132
YQC
Sbjct: 76 AYQCVVGG 83
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 38.1 bits (87), Expect = 6e-05
Identities = 17/106 (16%), Positives = 29/106 (27%), Gaps = 20/106 (18%)
Query: 8 PPSIRTSPSNGQLTVRKGGTITLECKASGNPV---PSIIWSKKDSSLPS----------- 53
P + V GG+IT + +G + P + W K S
Sbjct: 4 IGLFVMRPQD--GEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHD 61
Query: 54 ---GEKSLEGFSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
+ F + + G Y+C + + L V
Sbjct: 62 SYDRASKVYLFELHITDAQPAFTGGYRCEVSTKDKF-DCSNFNLTV 106
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 37.7 bits (86), Expect = 6e-05
Identities = 18/82 (21%), Positives = 25/82 (30%), Gaps = 3/82 (3%)
Query: 19 QLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITL--EKVDRHQAGVY 76
Q + GGT L+C N + K L + +GVY
Sbjct: 6 QHFFKHGGTAELKCSQKSNLARVFWKFQNGVLKAESPKYGLMGRKNLLIFNLSEGDSGVY 65
Query: 77 QCTATNGVG-DPVTVDMTLEVL 97
QC + V V + VL
Sbjct: 66 QCLSEERVKNKTVFQVVAKHVL 87
Score = 26.9 bits (58), Expect = 0.42
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 111 FSITLEKVDRHQAGVYQCTATNGVG-DPVTVDMTLEVL 147
++ + + +GVYQC + V V + VL
Sbjct: 50 KNLLIFNLSEGDSGVYQCLSEERVKNKTVFQVVAKHVL 87
>d2fcba1 b.1.1.4 (A:6-90) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 85
Score = 36.9 bits (84), Expect = 9e-05
Identities = 15/86 (17%), Positives = 31/86 (36%), Gaps = 7/86 (8%)
Query: 9 PSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEKV 68
++ P + V + ++TL C+ + +P I + +L K
Sbjct: 5 AVLKLEPQW--INVLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQ----PSYRFKA 58
Query: 69 DRHQAGVYQCTATNGVG-DPVTVDMT 93
+ + +G Y C DPV + +
Sbjct: 59 NNNDSGEYTCQTGQTSLSDPVHLTVL 84
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 37.2 bits (85), Expect = 1e-04
Identities = 12/84 (14%), Positives = 23/84 (27%), Gaps = 7/84 (8%)
Query: 20 LTVRKGGTITLECKAS-GNPVPSIIWSKKDSSLPSGEKSLEGF-----SITLEKVDRHQA 73
L C + +I W K DS P + + +
Sbjct: 12 LVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDS 71
Query: 74 GVYQCTATNGVGDPVTVDMTLEVL 97
G Y C N + + ++ + +
Sbjct: 72 GHYYCVVRNSSYC-LRIKISAKFV 94
Score = 26.0 bits (56), Expect = 0.98
Identities = 4/36 (11%), Positives = 12/36 (33%), Gaps = 1/36 (2%)
Query: 112 SITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVL 147
+ +G Y C N + + ++ + +
Sbjct: 60 KLWFVPAKVEDSGHYYCVVRNSSYC-LRIKISAKFV 94
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha
subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 36.5 bits (83), Expect = 1e-04
Identities = 16/78 (20%), Positives = 24/78 (30%), Gaps = 2/78 (2%)
Query: 20 LTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEKVDRHQAGVYQCT 79
V +G + L C N + KD SIT +G Y CT
Sbjct: 10 EVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISIT--NATVEDSGTYYCT 67
Query: 80 ATNGVGDPVTVDMTLEVL 97
D + + + V+
Sbjct: 68 GKVWQLDYESEPLNITVI 85
Score = 25.7 bits (55), Expect = 1.2
Identities = 7/35 (20%), Positives = 14/35 (40%)
Query: 113 ITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVL 147
I++ +G Y CT D + + + V+
Sbjct: 51 ISITNATVEDSGTYYCTGKVWQLDYESEPLNITVI 85
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 36.6 bits (83), Expect = 2e-04
Identities = 24/140 (17%), Positives = 36/140 (25%), Gaps = 40/140 (28%)
Query: 9 PSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEKV 68
S+ T+ S+ + V + +I L C SG P + W
Sbjct: 2 GSVYTAQSD--VQVPENESIKLTCTYSGFSSPRVEWKFVQ-------------------- 39
Query: 69 DRHQAGVYQCTATNGVGDPVTVDMTLEVLCKILPSGEKSLEGFSITLEKVDRHQAGVYQC 128
T + + + IT V R G Y C
Sbjct: 40 -----------------GSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTC 82
Query: 129 TATNGVGDPV-TVDMTLEVL 147
+ G V + L VL
Sbjct: 83 MVSEEGGQNYGEVSIHLTVL 102
>d1cs6a2 b.1.1.4 (A:104-208) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 105
Score = 36.6 bits (83), Expect = 2e-04
Identities = 12/85 (14%), Positives = 24/85 (28%), Gaps = 8/85 (9%)
Query: 7 VPPSIRTSPSNGQLTVRKGGTITLECKAS-GNPVPSIIWSKKDSSLPSGEK-----SLEG 60
+ + + +G + C P S W + S
Sbjct: 3 LQEFSAEERDP--VKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTT 60
Query: 61 FSITLEKVDRHQAGVYQCTATNGVG 85
++ + K + G Y C AT+ +
Sbjct: 61 GNLYIAKTEASDLGNYSCFATSHID 85
Score = 26.2 bits (56), Expect = 1.1
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 107 SLEGFSITLEKVDRHQAGVYQCTATNGVG 135
S ++ + K + G Y C AT+ +
Sbjct: 57 SQTTGNLYIAKTEASDLGNYSCFATSHID 85
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 35.9 bits (82), Expect = 3e-04
Identities = 13/71 (18%), Positives = 19/71 (26%), Gaps = 6/71 (8%)
Query: 20 LTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSG-----EKSLEGFSITLEKVDRHQAG 74
+ V G T E + S P W K L + + + + L G
Sbjct: 11 VEVFVGETAHFEIELS-EPDVHGQWKLKGQPLTASPDCEIIEDGKKHILILHNCQLGMTG 69
Query: 75 VYQCTATNGVG 85
A N
Sbjct: 70 EVSFQAANAKS 80
>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1
(VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 35.5 bits (80), Expect = 4e-04
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
Query: 11 IRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSL--EGFSITLEKV 68
I T+P + + + G +++L C +G P W + S +G+ + ++T+ V
Sbjct: 3 IETTPES-RYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPV 61
Query: 69 DRHQAGVYQCTATNGVGDPVTVDMTLEV 96
Y CTAT + + +E+
Sbjct: 62 SFGNEHSYLCTATCESR-KLEKGIQVEI 88
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 35.1 bits (79), Expect = 7e-04
Identities = 18/103 (17%), Positives = 33/103 (32%), Gaps = 17/103 (16%)
Query: 7 VPPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSL------------PSG 54
PP I ++ + G ++C P P I ++
Sbjct: 6 GPPIISSTQT---QHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETIS 62
Query: 55 EKSLEGFSITLEKVDR-HQAGVYQCTATNGVGDPVTVDMTLEV 96
+ ++T+ + R +Y CTA N G T + L+
Sbjct: 63 TEEGVISTLTISNIVRADFQTIYNCTAWNSFGS-DTEIIRLKE 104
>d1f2qa1 b.1.1.4 (A:4-85) IgE high affinity receptor alpha subunit
{Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 33.9 bits (76), Expect = 0.001
Identities = 16/86 (18%), Positives = 30/86 (34%), Gaps = 7/86 (8%)
Query: 9 PSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEKV 68
P + +P + KG +TL C + S + SL S+ +
Sbjct: 2 PKVSLNPPW--NRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEETN----SSLNIVNA 55
Query: 69 DRHQAGVYQCTATNGVG-DPVTVDMT 93
+G Y+C +PV +++
Sbjct: 56 KFEDSGEYKCQHQQVNESEPVYLEVF 81
Score = 25.8 bits (55), Expect = 0.93
Identities = 5/32 (15%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 113 ITLEKVDRHQAGVYQCTATNGVG-DPVTVDMT 143
+ + +G Y+C +PV +++
Sbjct: 50 LNIVNAKFEDSGEYKCQHQQVNESEPVYLEVF 81
>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 84
Score = 33.9 bits (76), Expect = 0.001
Identities = 14/85 (16%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 13 TSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEKVDRHQ 72
T+ S+ + +G ++TL ++ PS+ G ++++ +++
Sbjct: 4 TANSD--THLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGG-----KTLSVSQLELQD 56
Query: 73 AGVYQCTATNGVGDPVTVDMTLEVL 97
+G + CT V + + VL
Sbjct: 57 SGTWTCTVLQNQKK-VEFKIDIVVL 80
Score = 24.7 bits (52), Expect = 2.3
Identities = 6/28 (21%), Positives = 10/28 (35%), Gaps = 1/28 (3%)
Query: 120 RHQAGVYQCTATNGVGDPVTVDMTLEVL 147
+G + CT V + + VL
Sbjct: 54 LQDSGTWTCTVLQNQKK-VEFKIDIVVL 80
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 34.2 bits (77), Expect = 0.002
Identities = 18/145 (12%), Positives = 38/145 (26%), Gaps = 32/145 (22%)
Query: 3 QLQMVPPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFS 62
Q +++ P + G L C+ S + +
Sbjct: 2 QFRVIGPG-------HPIRALVGDEAELPCRISPGKNATGME------------------ 36
Query: 63 ITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVLCKILPSGEKSLEG-FSITLEKVDRH 121
V +++ + G + E + E EG ++ ++ V
Sbjct: 37 -----VGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNVRFS 91
Query: 122 QAGVYQCTATNGVGDPVTVDMTLEV 146
G Y C + + L+V
Sbjct: 92 DEGGYTCFFRDHSYQ-EEAAVELKV 115
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 33.1 bits (74), Expect = 0.004
Identities = 20/94 (21%), Positives = 30/94 (31%), Gaps = 18/94 (19%)
Query: 20 LTVRKGGTITLECKASGNPV---PSIIWSK--------------KDSSLPSGEKSLEGFS 62
TV+ G IT K + P+I W K + + F
Sbjct: 10 GTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFE 69
Query: 63 ITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
+ + K + AG Y+C T + LEV
Sbjct: 70 MQIIKAKDNFAGNYRCEVTYKDKF-DSCSFDLEV 102
Score = 29.2 bits (64), Expect = 0.091
Identities = 15/90 (16%), Positives = 32/90 (35%), Gaps = 3/90 (3%)
Query: 59 EGFSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVLCKILPSGEKSLEGFSITLE-- 116
G IT + + + + T G + + ++ + E+ ++ ++
Sbjct: 14 VGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQII 73
Query: 117 KVDRHQAGVYQCTATNGVGDPVTVDMTLEV 146
K + AG Y+C T + LEV
Sbjct: 74 KAKDNFAGNYRCEVTYKDKF-DSCSFDLEV 102
>d1biha2 b.1.1.4 (A:99-209) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 111
Score = 33.1 bits (74), Expect = 0.004
Identities = 19/89 (21%), Positives = 26/89 (29%), Gaps = 13/89 (14%)
Query: 21 TVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSI-------------TLEK 67
T +G L+C +I KK S + F + K
Sbjct: 13 TPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTK 72
Query: 68 VDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
D Y CTA N D V + E+
Sbjct: 73 EDVSDIYKYVCTAKNAAVDEEVVLVEYEI 101
Score = 25.0 bits (53), Expect = 2.6
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 114 TLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 146
+ K D Y CTA N D V + E+
Sbjct: 69 IVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEI 101
>d1xeda_ b.1.1.1 (A:) Polymeric-immunoglobulin receptor, PIGR {Human
(Homo sapiens) [TaxId: 9606]}
Length = 116
Score = 32.5 bits (73), Expect = 0.005
Identities = 13/109 (11%), Positives = 33/109 (30%), Gaps = 27/109 (24%)
Query: 13 TSPSNGQLTVRKGGTITLECKASGNPVPSIIW------------------------SKKD 48
P ++ +G ++++ C V
Sbjct: 4 FGPE--EVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAG 61
Query: 49 SSLPSGEKSLEGFSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEVL 97
+ + F + + ++ + +G Y+C ++ D++LEVL
Sbjct: 62 RANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGIN-SRGLSFDVSLEVL 109
>d1nkra1 b.1.1.4 (A:6-101) Killer cell inhibitory receptor {Human
(Homo sapiens), p58-cl42 kir [TaxId: 9606]}
Length = 96
Score = 31.5 bits (71), Expect = 0.009
Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 8/75 (10%)
Query: 9 PSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIW---SKKDSSLPSGEKSLEGF--SI 63
PS+ P V+ T+ L+C + ++ D+ GE +
Sbjct: 3 PSLLAHPG---PLVKSEETVILQCWSDVMFEHFLLHREGMFNDTLRLIGEHHDGVSKANF 59
Query: 64 TLEKVDRHQAGVYQC 78
++ ++ + AG Y+C
Sbjct: 60 SISRMTQDLAGTYRC 74
>d2ij0c1 b.1.1.1 (C:1-117) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 118
Score = 31.8 bits (71), Expect = 0.010
Identities = 7/35 (20%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKD 48
PS + V+ G ++ +EC++ + ++ W ++
Sbjct: 7 HPSM--VIVKSGTSVKIECRSLDTNIHTMFWYRQF 39
>d1sq2n_ b.1.1.1 (N:) Novel antigen receptor (against lysozyme)
{Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]}
Length = 112
Score = 31.7 bits (71), Expect = 0.013
Identities = 12/81 (14%), Positives = 23/81 (28%), Gaps = 15/81 (18%)
Query: 20 LTVRKGGTITLECKASGNPVPS---------------IIWSKKDSSLPSGEKSLEGFSIT 64
+T G ++T+ C SK + + + FS+
Sbjct: 9 VTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLR 68
Query: 65 LEKVDRHQAGVYQCTATNGVG 85
+ + G Y+C G
Sbjct: 69 INDLTVEDGGTYRCGLGVAGG 89
>d1i9ea_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 115
Score = 31.7 bits (71), Expect = 0.014
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 16 SNGQLTVRKGGTITLECKASGNPVPSIIW 44
+ ++TV +G ++ L CK S + P + W
Sbjct: 6 PDARVTVSEGASLQLRCKYSYSATPYLFW 34
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 31.5 bits (70), Expect = 0.014
Identities = 21/121 (17%), Positives = 31/121 (25%), Gaps = 34/121 (28%)
Query: 10 SIRTSPSNGQLTVRKGGTITLECKASGNPVPS----IIWSKKDSS--------------- 50
S+ + + KG T L CK + +P I W +
Sbjct: 4 SLSITTPEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDK 63
Query: 51 --------------LPSGEKSLEGFSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
S + SI + + G YQC G + L V
Sbjct: 64 IYDDYYPDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGV-ANKKIHLVV 122
Query: 97 L 97
L
Sbjct: 123 L 123
>d1j8hd1 b.1.1.1 (D:1-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 115
Score = 31.3 bits (70), Expect = 0.015
Identities = 9/35 (25%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 10 SIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
S+ S ++V +G + L C S + P + W
Sbjct: 2 SVTQLGS--HVSVSEGALVLLRCNYSSSVPPYLFW 34
>d1nezg_ b.1.1.1 (G:) CD8 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 122
Score = 31.2 bits (70), Expect = 0.019
Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Query: 9 PSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
P +R P + G + L C+ G+ W
Sbjct: 2 PELRIFPKK--MDAELGQKVDLVCEVLGSVSQGCSW 35
>d1fltx_ b.1.1.4 (X:) Second domain of the Flt-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 95
Score = 30.5 bits (69), Expect = 0.023
Identities = 11/69 (15%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 20 LTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSL-----EGFSITLEKVDRHQAG 74
+ + +G + + C+ + + + +L K + +GF I + G
Sbjct: 15 IHMTEGRELVIPCRVTSPNITVTLKKFPLDTLIPDGKRIIWDSRKGFII--SNATYKEIG 72
Query: 75 VYQCTATNG 83
+ C AT
Sbjct: 73 LLTCEATVN 81
Score = 24.4 bits (53), Expect = 4.1
Identities = 4/21 (19%), Positives = 7/21 (33%)
Query: 113 ITLEKVDRHQAGVYQCTATNG 133
+ + G+ C AT
Sbjct: 61 FIISNATYKEIGLLTCEATVN 81
>d1ac6a_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 110
Score = 29.7 bits (66), Expect = 0.051
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 16 SNGQLTVRKGGTITLECKASGNPVPSIIWSK 46
+ GQ+ + + +T+ C S + P++ W
Sbjct: 6 TEGQVALSEEDFLTIHCNYSASGYPALFWYV 36
>d1fo0b_ b.1.1.1 (B:) T-cell antigen receptor {Mouse (Mus
musculus), beta-chain [TaxId: 10090]}
Length = 112
Score = 29.3 bits (65), Expect = 0.076
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDS 49
+P V +G + L C + P + W ++D
Sbjct: 7 NPRW--RLVPRGQAVNLRCILKNSQYPWMSWYQQDL 40
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 98
Score = 28.9 bits (64), Expect = 0.093
Identities = 13/96 (13%), Positives = 34/96 (35%), Gaps = 15/96 (15%)
Query: 17 NGQLTVRKGGTITLECK--ASGNPVPSIIWSKKDSSLPSGEKSLEGF------------S 62
+G + G I L + + + W + + + ++ ++ F
Sbjct: 2 SGTVWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGD 61
Query: 63 ITLEKVDRHQAGVYQCTATNGVG-DPVTVDMTLEVL 97
+ ++ + R +G Y T + G + + L +L
Sbjct: 62 LKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRIL 97
Score = 24.3 bits (52), Expect = 4.6
Identities = 8/44 (18%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 105 EKSLEGFSITLEKVDRHQAGVYQCTATNGVG-DPVTVDMTLEVL 147
+ L + ++ + R +G Y T + G + + L +L
Sbjct: 54 FEILANGDLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRIL 97
>d1akjd_ b.1.1.1 (D:) CD8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 114
Score = 29.1 bits (64), Expect = 0.10
Identities = 21/98 (21%), Positives = 33/98 (33%), Gaps = 28/98 (28%)
Query: 12 RTSPSNGQLTVRKGGTITLECKASGNPVPSII-W-------------------------S 45
R SP + T G T+ L+C+ + S W
Sbjct: 4 RVSPLD--RTWNLGETVELKCQVLLSNPTSGCSWLFQPRGAAASPTFLLYLSQNKPKAAE 61
Query: 46 KKDSSLPSGEKSLEGFSITLEKVDRHQAGVYQCTATNG 83
D+ SG++ + F +TL R G Y C+A +
Sbjct: 62 GLDTQRFSGKRLGDTFVLTLSDFRRENEGYYFCSALSN 99
>d1hxma1 b.1.1.1 (A:1-120) T-cell antigen receptor {Human (Homo
sapiens), gamma-chain [TaxId: 9606]}
Length = 120
Score = 29.1 bits (64), Expect = 0.11
Identities = 8/42 (19%), Positives = 15/42 (35%), Gaps = 7/42 (16%)
Query: 4 LQMVPPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWS 45
+++VP + V G TL C G + + +
Sbjct: 2 IELVPEH-------QTVPVSIGVPATLRCSMKGEAIGNYYIN 36
>d1l6za1 b.1.1.1 (A:1-107) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), N-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 107
Score = 28.9 bits (64), Expect = 0.11
Identities = 14/108 (12%), Positives = 29/108 (26%), Gaps = 25/108 (23%)
Query: 10 SIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLP----------------- 52
+I P V + + L + + W K +++
Sbjct: 3 TIEAVPPQ----VAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTG 58
Query: 53 ---SGEKSLEG-FSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
SG + + S+ + + GVY T+ + V
Sbjct: 59 QAYSGREIIYSNGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHV 106
>d1jbja2 b.1.1.4 (A:1-100) CD3 epsilon chain ectodomain fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 100
Score = 28.8 bits (64), Expect = 0.12
Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 11/62 (17%)
Query: 25 GGTITLECKASGNPVPSIIWSKKDSSLPSGEKS---LEGFSITLEKVDRHQAGVYQCTAT 81
G ++ L C + ++ W K LP L+ FS + +G Y C
Sbjct: 14 GTSVELTCPLDSDE--NLKWEKNGQELPQKHDKHLVLQDFS------EVEDSGYYVCYTP 65
Query: 82 NG 83
Sbjct: 66 AS 67
>d1kgcd1 b.1.1.1 (D:2-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 112
Score = 28.6 bits (63), Expect = 0.16
Identities = 5/24 (20%), Positives = 9/24 (37%), Gaps = 2/24 (8%)
Query: 13 TSPSNGQLTVRKGGTITLECKASG 36
T P+ + + + L C S
Sbjct: 3 TQPN--SMESNEEEPVHLPCNHST 24
>d1mexl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 4 [TaxId: 10090]}
Length = 107
Score = 28.1 bits (62), Expect = 0.19
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
S ++ G +++ CKAS N ++ W
Sbjct: 7 SQK--FMSTSLGNRVSVTCKASQNVGTNVAW 35
>d1tvda_ b.1.1.1 (A:) T-cell antigen receptor {Human (Homo
sapiens), delta-chain [TaxId: 9606]}
Length = 116
Score = 28.3 bits (62), Expect = 0.21
Identities = 6/21 (28%), Positives = 8/21 (38%)
Query: 16 SNGQLTVRKGGTITLECKASG 36
S+ TV G + L C
Sbjct: 6 SSPDQTVASGSEVVLLCTYDT 26
>d2atpb1 b.1.1.1 (B:1-115) CD8 {Mouse (Mus musculus), beta-chain
[TaxId: 10090]}
Length = 115
Score = 27.9 bits (61), Expect = 0.23
Identities = 9/60 (15%), Positives = 20/60 (33%)
Query: 18 GQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEKVDRHQAGVYQ 77
L V+ T + C+ + I+ ++ P + S + K + V +
Sbjct: 6 SSLLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDK 65
>d1lk3l1 b.1.1.1 (L:1-106) Immunoglobulin light chain kappa
variable domain, VL-kappa {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 106
Score = 27.7 bits (61), Expect = 0.24
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
P+ LTV G +T+ CKAS + + W
Sbjct: 7 PPA---LTVSPGEKLTISCKASESVTSRMHW 34
>d2cdea1 b.1.1.1 (A:2-115) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 114
Score = 27.9 bits (61), Expect = 0.24
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 9/43 (20%)
Query: 2 EQLQMVPPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
Q++ P S L + +G TL+C + +P ++ W
Sbjct: 1 NQVEQSPQS---------LIILEGKNCTLQCNYTVSPFSNLRW 34
>d1smoa_ b.1.1.1 (A:) TREM-1 (triggering receptor expressed on
myeloid cells 1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 27.8 bits (61), Expect = 0.27
Identities = 4/28 (14%), Positives = 13/28 (46%)
Query: 18 GQLTVRKGGTITLECKASGNPVPSIIWS 45
+ +++G T+ ++C + S +
Sbjct: 7 EKYELKEGQTLDVKCDYTLEKFASSQKA 34
>d1kgce1 b.1.1.1 (E:3-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 112
Score = 27.8 bits (61), Expect = 0.28
Identities = 13/99 (13%), Positives = 25/99 (25%), Gaps = 25/99 (25%)
Query: 14 SPSNGQLTVRKGGTITLECKASGN------------------PVPSIIWSKKDSSLPSGE 55
SP ++G + L C S LPS
Sbjct: 5 SPRY--KVAKRGQDVALRCDPISGHVSLFWYQQALGQGPEFLTYFQNEAQLDKSGLPSDR 62
Query: 56 -----KSLEGFSITLEKVDRHQAGVYQCTATNGVGDPVT 89
++ +++ + + VY C ++ G
Sbjct: 63 FFAERPEGSVSTLKIQRTQQEDSAVYLCASSLGQAYEQY 101
>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 86
Score = 27.2 bits (59), Expect = 0.30
Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEG--FSITLEKVDRH 71
SP + +T +I+L + P+ + SS S E ++ S TL ++
Sbjct: 3 SPRDLMVTASSETSISLIWTKASGPIDHYRITFTPSSGISSEVTVPRDRTSYTLTDLEPG 62
Query: 72 QAGVYQCTATNGVG--DPVTVD 91
+ TA G TVD
Sbjct: 63 AEYIISITAERGRQQSLESTVD 84
>d1u3ha1 b.1.1.1 (A:2-116) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 110
Score = 27.5 bits (60), Expect = 0.31
Identities = 16/97 (16%), Positives = 25/97 (25%), Gaps = 23/97 (23%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLP--------------------- 52
SP LTV +G T L C + W ++
Sbjct: 5 SPQ--SLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTI 62
Query: 53 SGEKSLEGFSITLEKVDRHQAGVYQCTATNGVGDPVT 89
K + S+ + + Y C A+ G
Sbjct: 63 FFNKREKKLSLHIADSQPGDSATYFCAASANSGTYQR 99
>d1u9ka_ b.1.1.1 (A:) TREM-1 (triggering receptor expressed on
myeloid cells 1) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 27.2 bits (60), Expect = 0.40
Identities = 4/18 (22%), Positives = 11/18 (61%)
Query: 19 QLTVRKGGTITLECKASG 36
+ + +G T+T++C +
Sbjct: 4 RYDLVEGQTLTVKCPFNI 21
>d1hkfa_ b.1.1.1 (A:) NK cell activating receptor NKP44 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 108
Score = 27.1 bits (59), Expect = 0.41
Identities = 12/100 (12%), Positives = 26/100 (26%), Gaps = 23/100 (23%)
Query: 20 LTVRKGGTITLECKASGNPVPS--IIW---------------------SKKDSSLPSGEK 56
L G T+T+ C+ W + +
Sbjct: 6 LQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDP 65
Query: 57 SLEGFSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
F++T+ + +G Y C + V+ + +
Sbjct: 66 DAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKSVRFYL 105
>d1ymmd1 b.1.1.1 (D:9-104) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 96
Score = 27.1 bits (59), Expect = 0.46
Identities = 4/18 (22%), Positives = 10/18 (55%)
Query: 20 LTVRKGGTITLECKASGN 37
L++++G T+ C +
Sbjct: 3 LSIQEGENATMNCSYKTS 20
>d1vesa_ b.1.1.1 (A:) Novel antigen receptor 12Y-2 {Spotted
wobbegong (Orectolobus maculatus) [TaxId: 168098]}
Length = 113
Score = 27.1 bits (59), Expect = 0.46
Identities = 4/17 (23%), Positives = 7/17 (41%)
Query: 20 LTVRKGGTITLECKASG 36
T G ++T+ C
Sbjct: 10 ATKETGESLTINCVLRD 26
>d2bnqd1 b.1.1.1 (D:2-114) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 113
Score = 26.9 bits (58), Expect = 0.52
Identities = 7/31 (22%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
P+ L+V +G + L C + + + ++ W
Sbjct: 6 IPA--ALSVPEGENLVLNCSFTDSAIYNLQW 34
>d1c5cl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 4
[TaxId: 10090]}
Length = 107
Score = 26.9 bits (59), Expect = 0.55
Identities = 18/102 (17%), Positives = 31/102 (30%), Gaps = 27/102 (26%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIW-------------------SKKDSSLPSG 54
SPS L+ G ++L C+ S + W SG
Sbjct: 7 SPS--SLSASLGERVSLTCRTSQEISGYLSWLQQKPDGTIKRLIYDATKLDSGAPKRFSG 64
Query: 55 EKSLEGFSITLEKVDRHQAGVYQCTATN------GVGDPVTV 90
+S +S+T+ ++ Y C G G + +
Sbjct: 65 SRSGSDYSLTISSLESEDFADYYCLQYASFPRTFGGGTKLEI 106
>d2bnub1 b.1.1.1 (B:2-113) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 112
Score = 27.0 bits (59), Expect = 0.60
Identities = 6/24 (25%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Query: 14 SPSNGQLTVRKGGTITLECKASGN 37
+P ++ G ++TL+C N
Sbjct: 5 TPKF--QVLKTGQSMTLQCAQDMN 26
>d1lp9e1 b.1.1.1 (E:0-117) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 115
Score = 26.8 bits (58), Expect = 0.62
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 16 SNGQLTVRKGGTITLECKASG 36
+ G +T+ +G + L C
Sbjct: 7 TEGLVTLTEGLPVMLNCTYQS 27
>d1fp5a2 b.1.1.2 (A:439-543) Immunoglobulin heavy chain epsilon
constant domain 4, CH4-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 26.6 bits (58), Expect = 0.63
Identities = 15/105 (14%), Positives = 26/105 (24%), Gaps = 17/105 (16%)
Query: 7 VPPSIRTSPSNGQLTVRKGGTITLECKASG--NPVPSIIWSKKDSSLPSGEKSLEGF--- 61
P + + TL C S+ W + LP S
Sbjct: 3 AAPEVYAFATPEWPG--SRDKRTLACLIQNFMPEDISVQWLHNEVQLPDARHSTTQPRKT 60
Query: 62 ---------SITLEKVDRHQAGVYQCTATN-GVGDPVTVDMTLEV 96
+ + + + Q + C A + TV + V
Sbjct: 61 KGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAASPSQTVQRAVSV 105
>d1ypzf1 b.1.1.1 (F:1-120) T-cell antigen receptor {Human (Homo
sapiens), gamma-chain [TaxId: 9606]}
Length = 120
Score = 26.7 bits (58), Expect = 0.64
Identities = 6/43 (13%), Positives = 13/43 (30%), Gaps = 9/43 (20%)
Query: 3 QLQMVPPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIWS 45
+L+ S ++ + T + CK S+
Sbjct: 3 KLEQPEIS---------ISRPRDETAQISCKVFIESFRSVTIH 36
>d2ntsp1 b.1.1.1 (P:3-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 113
Score = 26.7 bits (58), Expect = 0.64
Identities = 6/24 (25%), Positives = 9/24 (37%), Gaps = 2/24 (8%)
Query: 14 SPSNGQLTVRKGGTITLECKASGN 37
+P L +G +TL C
Sbjct: 5 TPRY--LIKTRGQQVTLSCSPISG 26
>d1ogae1 b.1.1.1 (E:5-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 114
Score = 26.6 bits (58), Expect = 0.66
Identities = 8/24 (33%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Query: 14 SPSNGQLTVRKGGTITLECKASGN 37
SP L ++G +TL C+ + N
Sbjct: 5 SPKY--LFRKEGQNVTLSCEQNLN 26
>d2cdeb1 b.1.1.1 (B:5-116) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 112
Score = 26.7 bits (58), Expect = 0.68
Identities = 8/24 (33%), Positives = 11/24 (45%), Gaps = 2/24 (8%)
Query: 14 SPSNGQLTVRKGGTITLECKASGN 37
+P L + G ITLEC +
Sbjct: 4 TPRY--LVIGTGKKITLECSQTMG 25
>d2gj6d1 b.1.1.1 (D:15-114) T-cell antigen receptor {Mouse (Mus
musculus), beta-chain [TaxId: 10090]}
Length = 94
Score = 26.4 bits (57), Expect = 0.71
Identities = 6/20 (30%), Positives = 7/20 (35%)
Query: 25 GGTITLECKASGNPVPSIIW 44
G +L C S S W
Sbjct: 1 GAIASLNCTYSDRGSQSFFW 20
>d1nfde1 b.1.1.1 (E:2-107) Immunoglobulin light chain lambda
variable domain, VL-lambda {Hamster (Cricetulus
griseus) [TaxId: 10029]}
Length = 108
Score = 26.3 bits (57), Expect = 0.82
Identities = 8/32 (25%), Positives = 12/32 (37%), Gaps = 2/32 (6%)
Query: 13 TSPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
PS+ +V G T+ + C P W
Sbjct: 4 IQPSS--ASVTVGETVKITCSGDQLPKNFAYW 33
>d1q0xl2 b.1.1.2 (L:108-212) Immunoglobulin light chain lambda
constant domain, CL-lambda {Human (Homo sapiens)
[TaxId: 9606]}
Length = 102
Score = 26.2 bits (57), Expect = 0.90
Identities = 15/89 (16%), Positives = 30/89 (33%), Gaps = 17/89 (19%)
Query: 7 VPPSIR-TSPSNGQLTVRKGGTITLECKASGN--PVPSIIWSKKDSSLPSGEKSLEGF-- 61
P++ PS+ +L TL C + V ++ W + + +G ++ +
Sbjct: 4 SSPTVTLFPPSSEEL---STAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQ 60
Query: 62 ---------SITLEKVDRHQAGVYQCTAT 81
+TL + Y C T
Sbjct: 61 SNNKYMASSYLTLTARAWERHSSYSCQVT 89
>d1cd0a_ b.1.1.1 (A:) Immunoglobulin light chain lambda variable
domain, VL-lambda {Human (Homo sapiens), cluster 1
[TaxId: 9606]}
Length = 111
Score = 26.2 bits (57), Expect = 0.90
Identities = 6/26 (23%), Positives = 11/26 (42%)
Query: 20 LTVRKGGTITLECKASGNPVPSIIWS 45
++ G T+T+ C S + S
Sbjct: 10 VSESPGKTVTISCTRSSGNIDSNYVQ 35
>d2esve1 b.1.1.1 (E:3-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 111
Score = 26.2 bits (57), Expect = 0.99
Identities = 8/24 (33%), Positives = 11/24 (45%), Gaps = 2/24 (8%)
Query: 14 SPSNGQLTVRKGGTITLECKASGN 37
PS+ + KG T+TL C
Sbjct: 5 FPSH--SVIEKGQTVTLRCDPISG 26
>d2rhea_ b.1.1.1 (A:) Immunoglobulin light chain lambda variable
domain, VL-lambda {Human (Homo sapiens), cluster 2
[TaxId: 9606]}
Length = 114
Score = 26.2 bits (57), Expect = 1.00
Identities = 7/28 (25%), Positives = 11/28 (39%), Gaps = 3/28 (10%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPS 41
PS + G +T+ C S + S
Sbjct: 7 PPS---ASGTPGQRVTISCTGSATDIGS 31
>d1w72l1 b.1.1.1 (L:1-107) Immunoglobulin light chain lambda
variable domain, VL-lambda {Human (Homo sapiens),
cluster 5 [TaxId: 9606]}
Length = 109
Score = 26.2 bits (57), Expect = 1.0
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
PS ++V G T + C + S+ W
Sbjct: 7 PPS---VSVAPGQTARITCGGNNIGSRSVHW 34
>d1op3k1 b.1.1.1 (K:2-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Engineered (including hybrid
species)}
Length = 106
Score = 25.8 bits (56), Expect = 1.2
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
SPS L+ G TIT+ C+AS + + W
Sbjct: 6 SPS--TLSASVGDTITITCRASQSIETWLAW 34
>d1a0ql1 b.1.1.1 (L:2-108) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 4 [TaxId: 10090]}
Length = 106
Score = 25.8 bits (56), Expect = 1.2
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
SPS+ L+ GG +T+ CKAS + I W
Sbjct: 6 SPSS--LSASLGGKVTITCKASQDIKKYIGW 34
>d8faba1 b.1.1.1 (A:3-105) Immunoglobulin light chain lambda
variable domain, VL-lambda {Human (Homo sapiens),
cluster 5 [TaxId: 9606]}
Length = 103
Score = 25.8 bits (56), Expect = 1.3
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
PS ++V G T + C A+ P W
Sbjct: 5 PPS---VSVSPGQTARITCSANALPNQYAYW 32
>d2esvd1 b.1.1.1 (D:4-116) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 110
Score = 25.5 bits (55), Expect = 1.6
Identities = 7/37 (18%), Positives = 11/37 (29%), Gaps = 9/37 (24%)
Query: 8 PPSIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
PPS + +G L C S ++
Sbjct: 5 PPS---------MDCAEGRAANLPCNHSTISGNEYVY 32
>d1hxmb1 b.1.1.1 (B:1-123) T-cell antigen receptor {Human (Homo
sapiens), delta-chain [TaxId: 9606]}
Length = 123
Score = 25.5 bits (55), Expect = 1.7
Identities = 7/17 (41%), Positives = 7/17 (41%)
Query: 20 LTVRKGGTITLECKASG 36
T T LEC SG
Sbjct: 11 STKTLSKTARLECVVSG 27
>d2ak4d1 b.1.1.1 (D:1-116) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 114
Score = 25.6 bits (55), Expect = 1.7
Identities = 5/30 (16%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 16 SNGQLTVRKGGTITLECKASG-NPVPSIIW 44
+ +++V + +TL+C + + W
Sbjct: 6 AQTEISVVEKEDVTLDCVYETRDTTYYLFW 35
>d2fx7h1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 127
Score = 25.5 bits (55), Expect = 1.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
R G ++T+ CKASG + S
Sbjct: 12 KRPGSSVTVSCKASGGSFSTYALS 35
>d1mjul1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 1.1 [TaxId: 10090]}
Length = 112
Score = 25.4 bits (55), Expect = 1.7
Identities = 5/22 (22%), Positives = 14/22 (63%)
Query: 20 LTVRKGGTITLECKASGNPVPS 41
+ V G ++++ C++S + + S
Sbjct: 11 VPVTPGESVSISCRSSKSLLHS 32
>d1rzfl1 b.1.1.1 (L:2-108) Immunoglobulin light chain lambda
variable domain, VL-lambda {Human (Homo sapiens),
cluster 2 [TaxId: 9606]}
Length = 111
Score = 25.5 bits (55), Expect = 1.7
Identities = 7/32 (21%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIWS 45
PS ++ G +T+ C S + + + S
Sbjct: 7 PPS---VSAAPGQKVTISCSGSSSNIGNNDVS 35
>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid
binding Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 121
Score = 25.5 bits (55), Expect = 1.8
Identities = 5/24 (20%), Positives = 10/24 (41%)
Query: 18 GQLTVRKGGTITLECKASGNPVPS 41
+TV++G + + C S
Sbjct: 9 SSVTVQEGMCVHVRCSFSYPVDSQ 32
>d1ogad1 b.1.1.1 (D:3-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 115
Score = 25.6 bits (55), Expect = 1.9
Identities = 7/24 (29%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Query: 14 SPSNGQLTVRKGGTITLECKASGN 37
SP L++++G +T+ C +S
Sbjct: 6 SPQF--LSIQEGENLTVYCNSSSV 27
>d1neua_ b.1.1.1 (A:) Myelin membrane adhesion molecule P0 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 119
Score = 25.3 bits (54), Expect = 1.9
Identities = 22/133 (16%), Positives = 37/133 (27%), Gaps = 20/133 (15%)
Query: 16 SNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEKVDRHQAGV 75
++ ++ G +TL C S S E + S T
Sbjct: 5 TDREVYGAVGSQVTLHC-----------------SFWSSEWVSDDISFTWRYQPEGGRDA 47
Query: 76 YQCTATNGVGDPVTVDMTLEVLCKILPSGEKSLEGFSITLEKVDRHQAGVYQCTATNGVG 135
+ T + + G+ S + SI + +D G + C N
Sbjct: 48 ISIFHYAKGQPYIDEVGTFKERIQW--VGDPSWKDGSIVIHNLDYSDNGTFTCDVKNPPD 105
Query: 136 DPV-TVDMTLEVL 147
T +TL V
Sbjct: 106 IVGKTSQVTLYVF 118
>d1rzga1 b.1.1.1 (A:1-113) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 130
Score = 25.5 bits (55), Expect = 2.0
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
+ G ++ + CKASG + +
Sbjct: 12 KKPGSSVKVSCKASGGTFSNYAIN 35
>d1b2wh1 b.1.1.1 (H:1-117) Immunoglobulin heavy chain variable
domain, VH {Engineered (including hybrid species)}
Length = 117
Score = 25.4 bits (55), Expect = 2.0
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
V+ G ++ L C ASG S +
Sbjct: 12 VQPGRSLKLSCLASGYIFTSSWIN 35
>d1bqka_ b.6.1.1 (A:) Pseudoazurin {Achromobacter cycloclastes
[TaxId: 223]}
Length = 124
Score = 25.4 bits (55), Expect = 2.1
Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEKVDRHQA 73
P++ L V G T+T G+ V +I D + K E + +T +
Sbjct: 19 EPAS--LKVAPGDTVTFIPTDKGHNVETIKGMIPDGAEAFKSKINENYKVTFTAPGVY-- 74
Query: 74 GVYQCT 79
+CT
Sbjct: 75 -GVKCT 79
>d1qfoa_ b.1.1.1 (A:) N-terminal domain of sialoadhesin {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 118
Score = 25.2 bits (54), Expect = 2.2
Identities = 13/124 (10%), Positives = 27/124 (21%), Gaps = 24/124 (19%)
Query: 13 TSPSNGQLTVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGEKSLEGFSITLEKVDRHQ 72
+SP + G + + C S + +I +
Sbjct: 5 SSPK--NVQGLSGSCLLIPCIFSYPADVPVSNGI--------------TAIWYYDYSGKR 48
Query: 73 AGVYQCTATNGVGDPVTVDMTLEVLCKILPSGEKSLEGFSITLEKVDRHQAGVYQCTATN 132
V V L G + ++ L+ + +G Y
Sbjct: 49 QVVIHSGDPKLVDKRFRGRAEL--------MGNMDHKVCNLLLKDLKPEDSGTYNFRFEI 100
Query: 133 GVGD 136
+
Sbjct: 101 SDSN 104
>d1jpth1 b.1.1.1 (H:1-117) Immunoglobulin heavy chain variable
domain, VH {Engineered (including hybrid species)}
Length = 117
Score = 25.4 bits (55), Expect = 2.2
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
V+ GG++ L C ASG +
Sbjct: 12 VQPGGSLRLSCAASGFNIKEYYMH 35
>d2jelh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 118
Score = 25.4 bits (55), Expect = 2.2
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
VR G ++ + CK SG +
Sbjct: 12 VRPGVSVKISCKGSGYTFTTYAMH 35
>d1jnhb1 b.1.1.1 (B:1-117) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 117
Score = 25.0 bits (54), Expect = 2.3
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
R G ++ L C+ SG +
Sbjct: 12 ARPGASVKLSCRTSGYSFTTYWMQ 35
>d2nxyd1 b.1.1.1 (D:3001-3128) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 128
Score = 25.1 bits (54), Expect = 2.3
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
+ G ++ + CKASG+ ++
Sbjct: 12 KKPGSSVKVSCKASGDTFIRYSFT 35
>d1oaql_ b.1.1.1 (L:) Immunoglobulin light chain lambda variable
domain, VL-lambda {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 110
Score = 25.1 bits (54), Expect = 2.3
Identities = 8/24 (33%), Positives = 12/24 (50%), Gaps = 3/24 (12%)
Query: 14 SPSNGQLTVRKGGTITLECKASGN 37
+ LT G T+TL C++S
Sbjct: 7 ESA---LTTSPGETVTLTCRSSTG 27
>d1fo0a_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 115
Score = 25.2 bits (54), Expect = 2.3
Identities = 4/21 (19%), Positives = 11/21 (52%)
Query: 16 SNGQLTVRKGGTITLECKASG 36
+ ++V + T+T++C
Sbjct: 5 TQTSISVMEKTTVTMDCVYET 25
>d1o0va1 b.1.1.2 (A:228-330) Immunoglobulin heavy chain epsilon
constant domain 2, CH2-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 25.1 bits (54), Expect = 2.4
Identities = 11/50 (22%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Query: 7 VPPSIRTSPSNGQLTVRKGGTITLECKASG--NPVPSIIWSKKDSSLPSG 54
PP+++ S+ TI L C SG I W + +
Sbjct: 3 TPPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVD 52
>d1oari_ b.1.1.1 (I:) Immunoglobulin heavy chain variable domain,
VH {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 103
Score = 25.1 bits (54), Expect = 2.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 25 GGTITLECKASG 36
G ++ L CKASG
Sbjct: 2 GASVKLSCKASG 13
>d2aq2a1 b.1.1.1 (A:1-117) T-cell antigen receptor {Mouse (Mus
musculus), beta-chain [TaxId: 10090]}
Length = 110
Score = 25.0 bits (54), Expect = 2.5
Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 3/31 (9%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
SP N G +TL C+ + N ++ W
Sbjct: 7 SPRN--KVAVTGEKVTLSCQQTNN-HNNMYW 34
>d1jhll_ b.1.1.1 (L:) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 4
[TaxId: 10090]}
Length = 108
Score = 25.1 bits (54), Expect = 2.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
SPS L G TIT+ C+AS + S+ W
Sbjct: 7 SPSY--LVASPGETITINCRASKSISKSLAW 35
>d1yedb1 b.1.1.1 (B:1-113) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 124
Score = 25.1 bits (54), Expect = 2.5
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
VR G ++ L CK SG S
Sbjct: 12 VRPGTSVKLSCKTSGYIFTSYWIH 35
>d1j8he1 b.1.1.1 (E:2-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 113
Score = 25.2 bits (54), Expect = 2.6
Identities = 7/24 (29%), Positives = 9/24 (37%), Gaps = 2/24 (8%)
Query: 14 SPSNGQLTVRKGGTITLECKASGN 37
S L R G + LEC +
Sbjct: 6 SSRY--LVKRTGEKVFLECVQDMD 27
>d1sjva_ b.1.1.1 (A:) Camelid IG heavy chain variable domain, VHh
{Llama (Lama glama) [TaxId: 9844]}
Length = 107
Score = 25.0 bits (54), Expect = 2.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 22 VRKGGTITLECKASG 36
V+ G ++ L C ASG
Sbjct: 5 VQAGESLKLSCAASG 19
>d1n0xh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 127
Score = 25.1 bits (54), Expect = 2.6
Identities = 5/24 (20%), Positives = 12/24 (50%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
+ G ++ + C+ASG + +
Sbjct: 12 KKPGASVKVSCQASGYRFSNFVIH 35
>d1nlbh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 4 [TaxId:
10090]}
Length = 118
Score = 25.0 bits (54), Expect = 2.7
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
+ G T+ + CKASG
Sbjct: 12 KKPGETVKISCKASGYTFTDFSMH 35
>d1rz7h1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 119
Score = 25.1 bits (54), Expect = 2.7
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
+ G T+ + CKASG
Sbjct: 12 KKPGATVKISCKASGYTFSDFYMY 35
>d1iqdb1 b.1.1.1 (B:1-114) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 117
Score = 25.0 bits (54), Expect = 2.7
Identities = 5/24 (20%), Positives = 11/24 (45%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
+ G ++ + CK SG + +
Sbjct: 12 KKPGASVKVSCKVSGYTLTELPVH 35
>d1bd2d1 b.1.1.1 (D:1-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 111
Score = 24.8 bits (53), Expect = 2.7
Identities = 6/35 (17%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 10 SIRTSPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
++ + L+V++G L C + + +W
Sbjct: 2 QVKQNSP--SLSVQEGRISILNCDYTNSMFDYFLW 34
>d1rzfh1 b.1.1.1 (H:2-113) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 133
Score = 25.1 bits (54), Expect = 2.7
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
+ G ++ + C+ASG + S +S
Sbjct: 11 NKPGSSVKVSCQASGATLNSHAFS 34
>d1ieha_ b.1.1.1 (A:) Camelid IG heavy chain variable domain, VHh
{Llama (Lama glama) [TaxId: 9844]}
Length = 135
Score = 25.0 bits (54), Expect = 2.7
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
V+ GG++ + C ASG S +
Sbjct: 12 VQPGGSLRVSCAASGFTFSSYHMA 35
>d1nfdf1 b.1.1.1 (F:1-114) Immunoglobulin heavy chain variable
domain, VH {Hamster (Cricetulus griseus) [TaxId:
10029]}
Length = 121
Score = 25.0 bits (54), Expect = 2.7
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
V+ G ++ + C ASG
Sbjct: 12 VQPGSSLKVSCAASGFTFSDFWMY 35
>d1ct8b1 b.1.1.1 (B:1-113) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.3 [TaxId:
10090]}
Length = 118
Score = 25.0 bits (54), Expect = 2.9
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
V+ G ++ L CK SG S +
Sbjct: 12 VKPGASVKLSCKTSGFTFSSSYIN 35
>d3c2ah1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 4 [TaxId:
9606]}
Length = 131
Score = 25.1 bits (54), Expect = 3.0
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
V+ GG++ L C ASG + +
Sbjct: 12 VKPGGSLRLTCVASGFTFSDVWLN 35
>d1bz7b1 b.1.1.1 (B:1-122) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 2.2 [TaxId:
10090]}
Length = 122
Score = 25.1 bits (54), Expect = 3.0
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
V+ GG+ L C ASG +
Sbjct: 12 VQPGGSRKLSCAASGFTFSNFGMH 35
>d1rhhb1 b.1.1.1 (B:3-113) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 130
Score = 25.1 bits (54), Expect = 3.0
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
+ G ++ + CKASG ++
Sbjct: 11 KKPGSSVQVSCKASGGTFSMYGFN 34
>d2gsia1 b.1.1.1 (A:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 2 [TaxId: 10090]}
Length = 111
Score = 24.7 bits (53), Expect = 3.1
Identities = 9/24 (37%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Query: 14 SPSNGQLTVRKGGTITLECKASGN 37
SP+ L V G T+ C AS +
Sbjct: 7 SPA--SLAVSLGQPATISCGASKS 28
>d1vgeh1 b.1.1.1 (H:1-122) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 1 [TaxId:
9606]}
Length = 122
Score = 24.7 bits (53), Expect = 3.2
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
+ G ++ + CKASG S
Sbjct: 13 KKPGASVKVSCKASGYSFTSYGLH 36
>d1ad9b1 b.1.1.1 (B:1-113) Immunoglobulin heavy chain variable
domain, VH {Engineered (including hybrid species)}
Length = 120
Score = 24.7 bits (53), Expect = 3.3
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
+ G ++ + CKASG +
Sbjct: 12 KKPGSSVKVSCKASGYTFTDYYIN 35
>d1j05b_ b.1.1.1 (B:) Immunoglobulin heavy chain variable domain,
VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}
Length = 121
Score = 24.7 bits (53), Expect = 3.3
Identities = 7/24 (29%), Positives = 10/24 (41%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
V G ++ L C ASG +
Sbjct: 12 VEPGASVKLSCTASGFNIKDTYMH 35
>d1qnzh_ b.1.1.1 (H:) Immunoglobulin heavy chain variable domain,
VH {Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]}
Length = 119
Score = 24.7 bits (53), Expect = 3.3
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
V+ G ++ + CKASG +
Sbjct: 12 VKPGASVKMSCKASGYTFTTYPIE 35
>d3bp5a1 b.1.1.1 (A:1-114) Programmed cell death protein 1, PD1,
extracellular domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 114
Score = 24.7 bits (53), Expect = 3.6
Identities = 17/97 (17%), Positives = 28/97 (28%), Gaps = 25/97 (25%)
Query: 10 SIRTSPSNGQLTVRKGGTITLECKASGN----------------PVPSIIWSKKDSSLP- 52
S+ P+ LTV +G T C S +S S
Sbjct: 1 SLTFYPA--WLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQ 58
Query: 53 ------SGEKSLEGFSITLEKVDRHQAGVYQCTATNG 83
+ F + + R+ +G+Y C A +
Sbjct: 59 DARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAISL 95
>d2b1hh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Engineered (including hybrid species)}
Length = 124
Score = 24.7 bits (53), Expect = 3.7
Identities = 4/24 (16%), Positives = 9/24 (37%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
+ G ++ + C+ SG
Sbjct: 12 KKSGESLKISCQTSGYSFSDYWIG 35
>d1wlta1 b.82.1.1 (A:1-176) dTDP-4-dehydrorhamnose 3,5-epimerase
RmlC {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Length = 176
Score = 24.7 bits (53), Expect = 3.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 38 PVPSIIWSKKDSSLPS 53
P+ +I S KD PS
Sbjct: 153 PIKEVIISDKDLQCPS 168
>d1i8ka_ b.1.1.1 (A:) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 4
[TaxId: 10090]}
Length = 106
Score = 24.3 bits (52), Expect = 3.9
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
SP++ L+V G +T+ C S + + W
Sbjct: 7 SPAS--LSVATGEKVTIRCMTSTDIDDDMNW 35
>d1lmka1 b.1.1.1 (A:2-127) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 126
Score = 24.6 bits (53), Expect = 3.9
Identities = 4/24 (16%), Positives = 11/24 (45%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
++ G ++ + CK +G +
Sbjct: 11 MKPGRSLKISCKTTGYIFSNYWIE 34
>d1i3ua_ b.1.1.1 (A:) Camelid IG heavy chain variable domain, VHh
{Llama (Lama glama) [TaxId: 9844]}
Length = 127
Score = 24.7 bits (53), Expect = 4.0
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 22 VRKGGTITLECKASGNPVPSIIW 44
V+ G ++ L C+ASG+ + + +
Sbjct: 12 VQAGDSLKLSCEASGDSIGTYVI 34
>d1nfde2 b.1.1.2 (E:108-215) Immunoglobulin light chain lambda
constant domain, CL-lambda {Hamster (Cricetulus
griseus) [TaxId: 10029]}
Length = 104
Score = 24.2 bits (52), Expect = 4.0
Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 6/53 (11%)
Query: 7 VPPSIR-TSPSNGQLTVRKGGTITLECKASGN--PVPSIIWSKKDSSLPSGEK 56
P + PS +L + TL C + ++ W +++ G K
Sbjct: 4 SSPKVTVFPPSPEEL---RTNKATLVCLVNDFYPGSATVTWKANGATINDGVK 53
>d1tjgl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Engineered (including hybrid
species)}
Length = 107
Score = 24.3 bits (52), Expect = 4.0
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
SPS+ L+ G IT+ C+AS ++ W
Sbjct: 7 SPSS--LSASVGDRITITCRASQGVTSALAW 35
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 24.4 bits (52), Expect = 4.1
Identities = 13/85 (15%), Positives = 23/85 (27%), Gaps = 22/85 (25%)
Query: 21 TVRKGGTITLECKASGNPVPSIIWSKKDSSLPSGE---------------------KSLE 59
+KG T+ L C AS W + G +
Sbjct: 5 LGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQ 64
Query: 60 G-FSITLEKVDRHQAGVYQCTATNG 83
G F + ++ + + Y C +
Sbjct: 65 GNFPLIIKNLKIEDSDTYICEVEDQ 89
>d2f4la1 b.23.3.1 (A:1-283) Putative acetamidase TM0119
{Thermotoga maritima [TaxId: 2336]}
Length = 283
Score = 24.9 bits (54), Expect = 4.1
Identities = 8/28 (28%), Positives = 10/28 (35%), Gaps = 1/28 (3%)
Query: 20 LTVRKGGTITLECK-ASGNPVPSIIWSK 46
V G + E A G I +SK
Sbjct: 21 EEVYPGEQVVFETLDALGGSYDKIDFSK 48
>d1q9ra1 b.1.1.1 (A:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 1.2 [TaxId: 10090]}
Length = 113
Score = 24.3 bits (52), Expect = 4.2
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIWS 45
SPS+ L V G +T+ CK+S + + S
Sbjct: 7 SPSS--LAVSAGEKVTMSCKSSQSLLNSRTRK 36
>d1rihh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 3.2 [TaxId:
10090]}
Length = 125
Score = 24.3 bits (52), Expect = 4.3
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 22 VRKGGTITLECKASGNPVPSIIWS 45
+ G ++ + C+ASG S
Sbjct: 12 AKPGASMKMSCRASGYSFTSYWIH 35
>d1fn4b1 b.1.1.1 (B:1-106) Immunoglobulin heavy chain variable
domain, VH {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 116
Score = 24.3 bits (52), Expect = 4.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 22 VRKGGTITLECKASG 36
VR T++L C SG
Sbjct: 12 VRPSETLSLTCTVSG 26
>d1h5ba_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 113
Score = 24.4 bits (52), Expect = 4.7
Identities = 7/24 (29%), Positives = 11/24 (45%), Gaps = 2/24 (8%)
Query: 14 SPSNGQLTVRKGGTITLECKASGN 37
SPS L++ +G L C +
Sbjct: 7 SPS--ALSLHEGTDSALRCNFTTT 28
>d1tjgh1 b.1.1.1 (H:1-113) Immunoglobulin heavy chain variable
domain, VH {Engineered (including hybrid species)}
Length = 132
Score = 24.3 bits (52), Expect = 4.8
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 22 VRKGGTITLECKASGNPVPSIIW 44
V+ T+TL C SG +
Sbjct: 12 VKPTQTLTLTCSFSGFSLSDFGV 34
>d1n4xl_ b.1.1.1 (L:) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 1.1
[TaxId: 10090]}
Length = 113
Score = 24.2 bits (52), Expect = 4.8
Identities = 7/32 (21%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIWS 45
+P L V G ++ C++S V + +
Sbjct: 8 TPLY--LPVSLGDQASISCRSSQTIVHNNGNT 37
>d1zvya1 b.1.1.1 (A:2-125) Camelid IG heavy chain variable domain,
VHh {Camel (Camelus dromedarius) [TaxId: 9838]}
Length = 124
Score = 24.3 bits (52), Expect = 5.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 22 VRKGGTITLECKASG 36
V+ GG++ L C ASG
Sbjct: 11 VQAGGSLRLSCAASG 25
>d1dr9a1 b.1.1.1 (A:1-105) CD80, N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 105
Score = 24.1 bits (51), Expect = 5.0
Identities = 12/98 (12%), Positives = 23/98 (23%), Gaps = 20/98 (20%)
Query: 19 QLTVRKGGTITLECKASGNP--------------------VPSIIWSKKDSSLPSGEKSL 58
+T TL C + + + + + +
Sbjct: 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDIT 62
Query: 59 EGFSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 96
SI + + G Y+C D + EV
Sbjct: 63 NNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEV 100
Score = 23.7 bits (50), Expect = 6.7
Identities = 8/36 (22%), Positives = 12/36 (33%)
Query: 111 FSITLEKVDRHQAGVYQCTATNGVGDPVTVDMTLEV 146
SI + + G Y+C D + EV
Sbjct: 65 LSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEV 100
>d2p49b1 b.1.1.1 (B:1-121) Camelid IG heavy chain variable domain,
VHh {Camel (Camelus dromedarius) [TaxId: 9838]}
Length = 121
Score = 24.3 bits (52), Expect = 5.0
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 22 VRKGGTITLECKASG 36
V+ GG++ L C ASG
Sbjct: 12 VQAGGSLRLSCAASG 26
>d1dlfh_ b.1.1.1 (H:) Immunoglobulin heavy chain variable domain,
VH {Mouse (Mus musculus), cluster 1 [TaxId: 10090]}
Length = 120
Score = 24.3 bits (52), Expect = 5.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 22 VRKGGTITLECKASG 36
V+ GG++ L C SG
Sbjct: 12 VQPGGSMKLSCATSG 26
>d1q9rb1 b.1.1.1 (B:1-111) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 1 [TaxId:
10090]}
Length = 122
Score = 24.3 bits (52), Expect = 5.3
Identities = 7/23 (30%), Positives = 10/23 (43%)
Query: 22 VRKGGTITLECKASGNPVPSIIW 44
V+ GG++ L C SG
Sbjct: 12 VQSGGSLRLSCATSGFTFTDYYM 34
>d1kxvc_ b.1.1.1 (C:) Camelid IG heavy chain variable domain, VHh
{Camel (Camelus dromedarius) [TaxId: 9838]}
Length = 119
Score = 24.3 bits (52), Expect = 5.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 22 VRKGGTITLECKASGNPVPSIIW 44
V GG++ L C ASGN + +
Sbjct: 11 VPAGGSLRLSCAASGNTLCTYDM 33
>d1lgva1 b.1.1.1 (A:1-112) Immunoglobulin light chain lambda
variable domain, VL-lambda {Human (Homo sapiens),
cluster 4 [TaxId: 9606]}
Length = 112
Score = 23.9 bits (51), Expect = 5.5
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 20 LTVRKGGTITLECKASGNPVPSIIW 44
++ G +IT+ C + V S
Sbjct: 10 VSGSPGQSITVSCTGVSSIVGSYNL 34
>d1dfbh1 b.1.1.1 (H:1-126) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 3 [TaxId:
9606]}
Length = 126
Score = 24.3 bits (52), Expect = 5.7
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 22 VRKGGTITLECKASG 36
V+ G ++ L C ASG
Sbjct: 12 VQPGRSLRLSCAASG 26
>d1rjca1 b.1.1.1 (A:2-127) Camelid IG heavy chain variable domain,
VHh {Camel (Camelus dromedarius) [TaxId: 9838]}
Length = 126
Score = 23.9 bits (51), Expect = 5.9
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 22 VRKGGTITLECKASG 36
V+ G ++ L C SG
Sbjct: 11 VQAGQSLRLSCATSG 25
>d2fb4h1 b.1.1.1 (H:1-119) Immunoglobulin heavy chain variable
domain, VH {Human (Homo sapiens), cluster 3 [TaxId:
9606]}
Length = 127
Score = 23.9 bits (51), Expect = 6.1
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 22 VRKGGTITLECKASGNPVPSIIW 44
V+ G ++ L C +SG S
Sbjct: 12 VQPGRSLRLSCSSSGFIFSSYAM 34
>d1ol0a_ b.1.1.1 (A:) Immunoglobulin heavy chain variable domain,
VH {Engineered (including hybrid species)}
Length = 121
Score = 23.9 bits (51), Expect = 6.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 22 VRKGGTITLECKASG 36
V+ GG++ L C ASG
Sbjct: 12 VQPGGSLRLSCAASG 26
>d1lo4h1 b.1.1.1 (H:1-118) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 2.1 [TaxId:
10090]}
Length = 118
Score = 23.9 bits (51), Expect = 6.6
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 22 VRKGGTITLECKASG 36
V+ GG++TL C+ASG
Sbjct: 12 VKPGGSLTLSCEASG 26
>d1etzb1 b.1.1.1 (B:1-126) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 6 [TaxId:
10090]}
Length = 126
Score = 23.9 bits (51), Expect = 6.7
Identities = 5/15 (33%), Positives = 9/15 (60%)
Query: 22 VRKGGTITLECKASG 36
++ T++L C SG
Sbjct: 12 LQPSQTLSLTCSFSG 26
>d1c5db1 b.1.1.1 (B:1-117) Immunoglobulin heavy chain variable
domain, VH {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 117
Score = 23.9 bits (51), Expect = 6.9
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 22 VRKGGTITLECKASG 36
V+ T++L C SG
Sbjct: 12 VQPSQTLSLTCTVSG 26
>d1yjdc1 b.1.1.1 (C:1-118) CD28 {Human (Homo sapiens) [TaxId:
9606]}
Length = 118
Score = 23.9 bits (51), Expect = 7.0
Identities = 6/28 (21%), Positives = 9/28 (32%)
Query: 18 GQLTVRKGGTITLECKASGNPVPSIIWS 45
+ V + L CK S N +
Sbjct: 8 SPMLVAYDNAVNLSCKYSYNLFSREFRA 35
>d1bwwa_ b.1.1.1 (A:) Immunoglobulin light chain kappa variable
domain, VL-kappa {Human (Homo sapiens), cluster 1
[TaxId: 9606]}
Length = 109
Score = 23.5 bits (50), Expect = 7.4
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
SPS L+ G +T+ C+AS + + + W
Sbjct: 9 SPS--SLSASVGDRVTITCQASQDIIKYLNW 37
>d1r0ah1 b.1.1.1 (H:1-123) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 6 [TaxId:
10090]}
Length = 123
Score = 23.9 bits (51), Expect = 7.6
Identities = 5/15 (33%), Positives = 6/15 (40%)
Query: 22 VRKGGTITLECKASG 36
V+ L C SG
Sbjct: 12 VQPSQPFRLTCTFSG 26
>d3cx5k1 b.1.1.1 (K:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 4 [TaxId: 10090]}
Length = 107
Score = 23.5 bits (50), Expect = 7.7
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 14 SPSNGQLTVRKGGTITLECKASGNPVPSIIW 44
+P + L G +T+ C+AS + + W
Sbjct: 7 TPVS--LAASLGDRVTISCRASQDINNFLNW 35
>d3cx5j1 b.1.1.1 (J:1-127) Immunoglobulin heavy chain variable
domain, VH {Mouse (Mus musculus), cluster 7.1 [TaxId:
10090]}
Length = 127
Score = 23.5 bits (50), Expect = 8.2
Identities = 4/15 (26%), Positives = 9/15 (60%)
Query: 22 VRKGGTITLECKASG 36
V+ +++L C +G
Sbjct: 12 VQPSQSLSLTCSVTG 26
>d1yqvl1 b.1.1.1 (L:2-107) Immunoglobulin light chain kappa variable
domain, VL-kappa {Mouse (Mus musculus), cluster 3.2
[TaxId: 10090]}
Length = 104
Score = 23.1 bits (49), Expect = 9.2
Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 25/100 (25%)
Query: 14 SPSNGQLTVRKGGTITLECKASGN-----------PVPSIIWSKKDSSLP-------SGE 55
SP+ ++ G +T+ C AS + W S L SG
Sbjct: 6 SPAI--MSASPGEKVTMTCSASSSVNYMYWYQQKSGTSPKRWIYDTSKLASGVPVRFSGS 63
Query: 56 KSLEGFSITLEKVDRHQAGVYQCTATN-----GVGDPVTV 90
S +S+T+ ++ A Y C G G + +
Sbjct: 64 GSGTSYSLTISSMETEDAATYYCQQWGRNPTFGGGTKLEI 103
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.312 0.131 0.377
Gapped
Lambda K H
0.267 0.0524 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 527,844
Number of extensions: 23396
Number of successful extensions: 352
Number of sequences better than 10.0: 1
Number of HSP's gapped: 309
Number of HSP's successfully gapped: 257
Length of query: 147
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 70
Effective length of database: 1,350,386
Effective search space: 94527020
Effective search space used: 94527020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 49 (23.1 bits)