Query psy7619
Match_columns 102
No_of_seqs 191 out of 1072
Neff 9.5
Searched_HMMs 29240
Date Fri Aug 16 22:58:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7619.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7619hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b6u_A Kinesin-like protein KI 100.0 6.4E-33 2.2E-37 189.9 12.7 97 2-102 17-113 (372)
2 2vvg_A Kinesin-2; motor protei 100.0 6.3E-33 2.2E-37 188.9 10.6 98 5-102 3-101 (350)
3 1goj_A Kinesin, kinesin heavy 100.0 3.1E-32 1.1E-36 185.8 12.4 92 1-102 1-92 (355)
4 1x88_A Kinesin-like protein KI 100.0 2E-32 6.9E-37 187.0 10.0 96 3-102 5-100 (359)
5 2heh_A KIF2C protein; kinesin, 100.0 2.1E-32 7E-37 188.1 9.8 98 4-102 49-146 (387)
6 1v8k_A Kinesin-like protein KI 100.0 4.7E-32 1.6E-36 187.3 9.9 98 4-102 69-166 (410)
7 4a14_A Kinesin, kinesin-like p 100.0 1.8E-31 6E-36 181.6 11.2 88 3-102 8-95 (344)
8 3lre_A Kinesin-like protein KI 100.0 2.2E-31 7.6E-36 181.6 10.9 97 4-102 8-117 (355)
9 2owm_A Nckin3-434, related to 100.0 2.6E-31 8.7E-36 185.4 11.1 99 4-102 36-148 (443)
10 2zfi_A Kinesin-like protein KI 100.0 6.7E-31 2.3E-35 179.9 12.1 91 5-102 3-101 (366)
11 1bg2_A Kinesin; motor protein, 100.0 4.8E-31 1.7E-35 178.2 11.2 86 3-102 4-89 (325)
12 2wbe_C Bipolar kinesin KRP-130 100.0 6.1E-31 2.1E-35 180.4 11.8 92 4-102 21-112 (373)
13 2y65_A Kinesin, kinesin heavy 100.0 6.8E-31 2.3E-35 179.7 10.5 86 4-102 9-96 (365)
14 3bfn_A Kinesin-like protein KI 100.0 5.8E-31 2E-35 180.9 8.3 95 1-102 16-110 (388)
15 1t5c_A CENP-E protein, centrom 100.0 6.1E-31 2.1E-35 179.1 8.2 88 4-102 2-89 (349)
16 3gbj_A KIF13B protein; kinesin 100.0 2.1E-30 7.3E-35 176.8 10.8 95 6-102 1-104 (354)
17 1ry6_A Internal kinesin; kines 100.0 7.7E-31 2.6E-35 179.2 8.3 95 7-102 1-96 (360)
18 3nwn_A Kinesin-like protein KI 100.0 2.4E-30 8.2E-35 176.7 10.3 93 4-102 22-116 (359)
19 3dc4_A Kinesin-like protein NO 100.0 8.8E-30 3E-34 173.1 10.1 85 4-102 20-106 (344)
20 2rep_A Kinesin-like protein KI 100.0 4.1E-30 1.4E-34 176.3 7.7 99 3-102 19-127 (376)
21 3t0q_A AGR253WP; kinesin, alph 100.0 1.6E-29 5.6E-34 172.2 9.0 91 5-102 4-97 (349)
22 2h58_A Kinesin-like protein KI 100.0 2E-29 6.9E-34 170.6 9.2 88 5-102 3-92 (330)
23 3cob_A Kinesin heavy chain-lik 100.0 9.5E-29 3.2E-33 169.3 10.8 89 4-102 3-91 (369)
24 2nr8_A Kinesin-like protein KI 100.0 1.4E-28 4.9E-33 167.8 10.7 94 3-102 20-115 (358)
25 1f9v_A Kinesin-like protein KA 100.0 2.1E-28 7.3E-33 166.5 10.3 90 5-102 2-96 (347)
26 3u06_A Protein claret segregat 100.0 1.8E-28 6E-33 169.9 9.8 93 5-102 58-150 (412)
27 4etp_A Kinesin-like protein KA 99.9 1.5E-27 5.1E-32 165.0 11.1 90 5-102 58-152 (403)
28 4h1g_A Maltose binding protein 99.9 7.1E-25 2.4E-29 160.4 8.2 91 5-102 373-474 (715)
29 2o0a_A S.cerevisiae chromosome 99.9 8.6E-22 2.9E-26 129.6 7.2 78 5-102 23-104 (298)
30 4etp_B Spindle POLE BODY-assoc 94.9 0.25 8.6E-06 33.3 8.3 76 6-100 59-137 (333)
31 3ec2_A DNA replication protein 74.7 1.2 4E-05 26.6 1.3 44 58-102 6-49 (180)
32 2w58_A DNAI, primosome compone 70.3 3.4 0.00012 24.9 2.7 44 58-102 21-65 (202)
33 2qgz_A Helicase loader, putati 62.8 5.7 0.00019 26.1 2.7 43 59-102 121-163 (308)
34 3otd_A TRNA(His) guanylyltrans 58.7 3.2 0.00011 27.3 0.9 21 80-100 55-75 (269)
35 4epz_A Transcription anti-term 48.7 1.4 4.8E-05 26.5 -1.8 19 81-99 61-79 (162)
36 3t15_A Ribulose bisphosphate c 44.8 20 0.00069 23.2 3.1 42 61-102 2-47 (293)
37 3te6_A Regulatory protein SIR3 41.6 29 0.00099 23.1 3.5 27 76-102 30-56 (318)
38 1jbk_A CLPB protein; beta barr 40.7 35 0.0012 19.5 3.6 23 80-102 32-54 (195)
39 2bjv_A PSP operon transcriptio 35.8 21 0.00071 22.4 2.0 38 59-102 3-40 (265)
40 1cix_A Protein (tachystatin A) 35.4 3.4 0.00012 18.9 -1.2 14 86-99 5-18 (44)
41 4hpq_A ATG31, KLTH0C07942P; au 33.5 25 0.00085 18.0 1.7 13 4-16 2-14 (69)
42 2p65_A Hypothetical protein PF 32.3 41 0.0014 19.2 2.9 23 80-102 32-54 (187)
43 2qbu_A Precorrin-2 methyltrans 31.7 80 0.0027 19.4 4.3 30 71-100 76-105 (232)
44 4gkp_A Spindle POLE BODY-assoc 31.1 1E+02 0.0034 20.3 4.7 58 30-99 30-90 (275)
45 2r62_A Cell division protease 29.5 45 0.0015 20.8 2.9 44 58-102 7-55 (268)
46 2e52_A Type II restriction enz 27.7 30 0.001 23.0 1.8 32 64-95 53-86 (300)
47 2vpb_B B-cell CLL/lymphoma 9 p 27.5 9.7 0.00033 16.9 -0.4 21 77-97 13-33 (35)
48 1qde_A EIF4A, translation init 25.4 63 0.0022 19.3 2.9 19 82-102 44-62 (224)
49 1nvp_B Transcription initiatio 25.3 69 0.0024 15.7 2.6 18 69-86 7-24 (57)
50 3bor_A Human initiation factor 24.5 42 0.0014 20.6 2.0 19 82-102 60-78 (237)
51 3uk6_A RUVB-like 2; hexameric 24.4 82 0.0028 20.5 3.5 39 59-102 41-81 (368)
52 1g8p_A Magnesium-chelatase 38 23.8 37 0.0013 22.0 1.7 39 56-102 18-56 (350)
53 3cf0_A Transitional endoplasmi 22.8 57 0.002 21.0 2.5 44 59-102 12-60 (301)
54 1egw_A MADS box transcription 22.8 69 0.0024 16.7 2.3 17 85-101 35-51 (77)
55 3b9p_A CG5977-PA, isoform A; A 22.8 44 0.0015 21.2 1.9 45 58-102 17-65 (297)
56 3dfe_A Putative PII-like signa 22.6 1.1E+02 0.0037 17.0 4.2 27 71-97 69-95 (111)
57 3d8b_A Fidgetin-like protein 1 21.8 31 0.0011 23.0 1.0 44 59-102 81-128 (357)
58 1jy4_A B4dimer; eight-stranded 21.6 28 0.00095 14.8 0.5 6 89-94 28-33 (35)
59 2gxq_A Heat resistant RNA depe 21.3 86 0.003 18.4 2.9 18 83-102 32-49 (207)
60 1i96_V Translation initiation 21.0 62 0.0021 17.4 1.9 13 4-16 29-41 (89)
61 3fmo_B ATP-dependent RNA helic 20.7 72 0.0025 20.6 2.6 21 82-102 122-142 (300)
62 4b4t_K 26S protease regulatory 20.6 1.7E+02 0.0057 20.4 4.5 44 59-102 169-217 (428)
63 3p57_A Myocyte-specific enhanc 20.5 57 0.002 17.6 1.8 18 85-102 35-52 (90)
64 2v1u_A Cell division control p 20.5 40 0.0014 22.0 1.3 40 62-102 15-55 (387)
65 1vec_A ATP-dependent RNA helic 20.3 94 0.0032 18.2 2.9 18 83-102 34-51 (206)
66 3h4m_A Proteasome-activating n 20.3 49 0.0017 20.8 1.7 45 58-102 13-62 (285)
67 3dkp_A Probable ATP-dependent 20.2 91 0.0031 19.0 2.9 19 82-102 59-77 (245)
68 3hh1_A Tetrapyrrole methylase 20.2 1.1E+02 0.0038 16.7 3.0 23 77-99 67-90 (117)
No 1
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=100.00 E-value=6.4e-33 Score=189.92 Aligned_cols=97 Identities=43% Similarity=0.761 Sum_probs=84.9
Q ss_pred CCCCCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHHH
Q psy7619 2 KSYDENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVRP 81 (102)
Q Consensus 2 ~~~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~ 81 (102)
+...++|+|+||+||++..|...+...++.++++...+.+..|... .....+.|.||+||+++++|++||+.+++|
T Consensus 17 ~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~----~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~p 92 (372)
T 3b6u_A 17 QGSSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGT----AHEMPKTFTFDAVYDWNAKQFELYDETFRP 92 (372)
T ss_dssp ----CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCT----TTCCCEEEECSEEECTTCCHHHHHHHTHHH
T ss_pred CCCCCCeEEEEEcCCCChhhhccCCceEEEEeCCCCEEEEECCCCC----CCCCceEEEcCeEeCCcCchHHHHHHHHHH
Confidence 3456899999999999999998888889999888888988877642 234578999999999999999999999999
Q ss_pred HHHHhhCcccEEEEEeccCCC
Q psy7619 82 MVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 82 ~v~~~l~G~n~~i~aYGqTgS 102 (102)
+|+.+|+|||+||||||||||
T Consensus 93 lv~~~l~G~n~tifAYGqTGS 113 (372)
T 3b6u_A 93 LVDSVLQGFNGTIFAYGQTGT 113 (372)
T ss_dssp HHHHHHTTCCEEEEEEESTTS
T ss_pred HHHHHhCCCeeeEEeecCCCC
Confidence 999999999999999999997
No 2
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=100.00 E-value=6.3e-33 Score=188.85 Aligned_cols=98 Identities=38% Similarity=0.718 Sum_probs=79.9
Q ss_pred CCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcC-CCCCCCceeeecceeeCCCCChHHHHHHhHHHHH
Q psy7619 5 DENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLK-PRQPGKARRFTFDAVYGMQATQTEIYENSVRPMV 83 (102)
Q Consensus 5 ~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~-~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~~v 83 (102)
.++|+|+||+||++.+|...+...++.++++...+.+..|..... .......+.|.||+||+++++|++||+.+++|+|
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv 82 (350)
T 2vvg_A 3 SDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSATQAKKVPRTFTFDAVYDQTSCNYGIFQASFKPLI 82 (350)
T ss_dssp -CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC--------------EEEECSEEECTTCCHHHHHHHTTHHHH
T ss_pred CCCeEEEEEeCCCChhhhccCCceEEEEcCCCCEEEEeeccccccccccCCCceEeeCCEEECCCcchhHHHHHHHHHHH
Confidence 679999999999999999888888999988778888877654222 1123457899999999999999999999999999
Q ss_pred HHhhCcccEEEEEeccCCC
Q psy7619 84 NHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 84 ~~~l~G~n~~i~aYGqTgS 102 (102)
+.+|+|||+||||||||||
T Consensus 83 ~~~l~G~n~tifAYGqTGS 101 (350)
T 2vvg_A 83 DAVLEGFNSTIFAYGQTGA 101 (350)
T ss_dssp HHHHTTCCEEEEEECSTTS
T ss_pred HHHhCCCceeEEeecCCCC
Confidence 9999999999999999997
No 3
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=100.00 E-value=3.1e-32 Score=185.81 Aligned_cols=92 Identities=37% Similarity=0.640 Sum_probs=80.6
Q ss_pred CCCCCCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHH
Q psy7619 1 MKSYDENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVR 80 (102)
Q Consensus 1 ~~~~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~ 80 (102)
|++..++|+|+||+||++..|...+..+++.+.++. .+.+.. ....+.|.||+||+++++|++||+.+++
T Consensus 1 ms~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~-~~~~~~---------~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~ 70 (355)
T 1goj_A 1 MSSSANSIKVVARFRPQNRVEIESGGQPIVTFQGPD-TCTVDS---------KEAQGSFTFDRVFDMSCKQSDIFDFSIK 70 (355)
T ss_dssp -CCSSCBCEEEEEECCCCHHHHTTTCCBCEEECSTT-EEEECS---------TTCCEEEECSEEECTTCCHHHHHHHHTH
T ss_pred CCCCCCCeEEEEECCCCChHHhhcCCceEEEEcCCC-eEEEcc---------CCCccEEeeCeEECCCCccHHHHHHHHH
Confidence 889999999999999999999988888888887653 444432 2346889999999999999999999999
Q ss_pred HHHHHhhCcccEEEEEeccCCC
Q psy7619 81 PMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 81 ~~v~~~l~G~n~~i~aYGqTgS 102 (102)
|+|+.+|+|||+||||||||||
T Consensus 71 plv~~~l~G~n~tifAYGqTGS 92 (355)
T 1goj_A 71 PTVDDILNGYNGTVFAYGQTGA 92 (355)
T ss_dssp HHHHHHTTTCCEEEEEECSTTS
T ss_pred HHHHHHhCCCcceEEEECCCCC
Confidence 9999999999999999999997
No 4
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=99.98 E-value=2e-32 Score=187.00 Aligned_cols=96 Identities=41% Similarity=0.762 Sum_probs=80.7
Q ss_pred CCCCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHHHH
Q psy7619 3 SYDENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVRPM 82 (102)
Q Consensus 3 ~~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~~ 82 (102)
...++|+|+||+||++..|...+...++.+++....+.+..+... .....+.|.||+||+++++|++||+.+++|+
T Consensus 5 ~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~~~~~~~~----~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~pl 80 (359)
T 1x88_A 5 EKGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLA----DKSSRKTYTFDMVFGASTKQIDVYRSVVCPI 80 (359)
T ss_dssp ----CCEEEEEECCCCHHHHHTTCCCCEEEETTTTEEEEEEEEET----TEEEEEEEECSEEECTTCCHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEeCCCChhhhhcCCceEEEEcCCCcEEEEeCCCcc----CCcCceEEeceEEEeccCchhHHHHHHHHHh
Confidence 456899999999999999998888889999887777777543211 1234678999999999999999999999999
Q ss_pred HHHhhCcccEEEEEeccCCC
Q psy7619 83 VNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 83 v~~~l~G~n~~i~aYGqTgS 102 (102)
|+.+|+|||+||||||||||
T Consensus 81 v~~~l~G~n~tifAYGqTGS 100 (359)
T 1x88_A 81 LDEVIMGYNCTIFAYGQTGT 100 (359)
T ss_dssp HHHHHTTCEEEEEEEECTTS
T ss_pred HHHHhCCCceEEEEeCCCCC
Confidence 99999999999999999997
No 5
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=99.98 E-value=2.1e-32 Score=188.05 Aligned_cols=98 Identities=31% Similarity=0.454 Sum_probs=81.3
Q ss_pred CCCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHHHHH
Q psy7619 4 YDENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVRPMV 83 (102)
Q Consensus 4 ~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~~v 83 (102)
++++|+|+||+||++.+|...+..+++.+.. +..+.+..|............+.|.||+||+++++|++||+.+++|+|
T Consensus 49 ~~~~I~V~vRvRP~~~~E~~~~~~~~v~~~~-~~~~~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~sQ~~Vy~~~~~plv 127 (387)
T 2heh_A 49 EEHRICVCVRKRPLNKQELAKKEIDVISIPS-KCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLV 127 (387)
T ss_dssp CCCSEEEEEEECCCCHHHHHTTCCBCEECCB-SSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTTHHHH
T ss_pred CCCCeEEEEECCCCChHHhccCCceEEEECC-CCEEEEeCCCccccccccccccEEeeeEEEecCCCceeehhhhHHHHH
Confidence 4689999999999999999888888888754 456666655543221112245789999999999999999999999999
Q ss_pred HHhhCcccEEEEEeccCCC
Q psy7619 84 NHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 84 ~~~l~G~n~~i~aYGqTgS 102 (102)
+.+|+|||+||||||||||
T Consensus 128 ~~~l~G~N~tifAYGQTGS 146 (387)
T 2heh_A 128 QTIFEGGKATCFAYGQTGS 146 (387)
T ss_dssp HHHHTTCEEEEEEESCTTS
T ss_pred HHHhcCCceEEEEecCCCC
Confidence 9999999999999999997
No 6
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=99.97 E-value=4.7e-32 Score=187.32 Aligned_cols=98 Identities=30% Similarity=0.451 Sum_probs=81.2
Q ss_pred CCCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHHHHH
Q psy7619 4 YDENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVRPMV 83 (102)
Q Consensus 4 ~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~~v 83 (102)
+.++|+|+||+||++..|...+..+++.+.. ...+.+..|............+.|.||+||+++++|++||+.+++|+|
T Consensus 69 ~~~~I~V~vRvRPl~~~E~~~~~~~~v~~~~-~~~v~v~~~~~~~~~~~~~~~~~F~FD~VF~~~~tQ~~Vy~~~~~plV 147 (410)
T 1v8k_A 69 EEHRICVCVRKRPLNKQELAKKEIDVISVPS-KCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLV 147 (410)
T ss_dssp SCCCEEEEEEECCCCHHHHHTTCCBCEECCS-SSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTTHHHH
T ss_pred CCCCeEEEEEeCCCChhHhhcCCccEEEECC-CCEEEEecCcccccccccccceEEeeeEEEecCCChhhhhHHHHHHHH
Confidence 3689999999999999999888888888764 456666655432221112235789999999999999999999999999
Q ss_pred HHhhCcccEEEEEeccCCC
Q psy7619 84 NHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 84 ~~~l~G~n~~i~aYGqTgS 102 (102)
+.+|+|||+||||||||||
T Consensus 148 ~~~l~G~N~tifAYGQTGS 166 (410)
T 1v8k_A 148 QTIFEGGKATCFAYGQTGS 166 (410)
T ss_dssp HHHHTTCEEEEEEEESTTS
T ss_pred HHHhcCCceeEEeecCCCC
Confidence 9999999999999999997
No 7
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=99.97 E-value=1.8e-31 Score=181.60 Aligned_cols=88 Identities=27% Similarity=0.576 Sum_probs=78.3
Q ss_pred CCCCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHHHH
Q psy7619 3 SYDENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVRPM 82 (102)
Q Consensus 3 ~~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~~ 82 (102)
.++.+|+|+||+||++.+|...+...++.+.+....+.+. ..+.|.||+||+++++|++||+.+++|+
T Consensus 8 ~~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~------------~~~~f~FD~Vf~~~~~Q~~vy~~~~~pl 75 (344)
T 4a14_A 8 AEEAPVRVALRVRPLLPKELLHGHQSCLQVEPGLGRVTLG------------RDRHFGFHVVLAEDAGQEAVYQACVQPL 75 (344)
T ss_dssp -CCCCCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEET------------TTEEEECSEEECTTCCHHHHHHHHTHHH
T ss_pred ccccceEEEEEecccchHHHhccCeeEEEEcCCCceEEec------------ccceEEEEEEEecCcchhHHHHHHHHHH
Confidence 4578999999999999999988888888887766666542 3578999999999999999999999999
Q ss_pred HHHhhCcccEEEEEeccCCC
Q psy7619 83 VNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 83 v~~~l~G~n~~i~aYGqTgS 102 (102)
|+.+|+|||+||||||||||
T Consensus 76 v~~~l~G~n~tifAYGqTGS 95 (344)
T 4a14_A 76 LEAFFEGFNATVFAYGQTGS 95 (344)
T ss_dssp HHHHHTTCCEEEEEESSTTS
T ss_pred HHHHHhhcCeeEEEecccCC
Confidence 99999999999999999997
No 8
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=99.97 E-value=2.2e-31 Score=181.63 Aligned_cols=97 Identities=34% Similarity=0.622 Sum_probs=73.8
Q ss_pred CCCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCc-C------------CCCCCCceeeecceeeCCCCC
Q psy7619 4 YDENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRL-K------------PRQPGKARRFTFDAVYGMQAT 70 (102)
Q Consensus 4 ~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~-~------------~~~~~~~~~f~FD~Vf~~~~s 70 (102)
..++|+|+||+||++.+|...+..+++.+... ..+ +.+|.... . .......+.|.||+||+++++
T Consensus 8 ~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~-~~~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~FD~vf~~~~~ 85 (355)
T 3lre_A 8 LCHHMKVVVRVRPENTKEKAAGFHKVVHVVDK-HIL-VFDPKQEEVSFFHGKKTTNQNVIKKQNKDLKFVFDAVFDETST 85 (355)
T ss_dssp ----CEEEEEECCCCHHHHHTTCCBSEEECSS-SEE-EEC------------------------CCEEEECSEEECTTCC
T ss_pred ccCCCEEEEEeCcCChHHHhcCCceEEEecCC-ceE-EecCCCCcceeecccccccccchhccCCCceEEeceEECCCCC
Confidence 46899999999999999999998888888643 333 33333210 0 111235678999999999999
Q ss_pred hHHHHHHhHHHHHHHhhCcccEEEEEeccCCC
Q psy7619 71 QTEIYENSVRPMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 71 q~~vy~~~~~~~v~~~l~G~n~~i~aYGqTgS 102 (102)
|++||+.+++|+|+.+|+|||+||||||||||
T Consensus 86 Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGS 117 (355)
T 3lre_A 86 QSEVFEHTTKPILRSFLNGYNCTVLAYGATGA 117 (355)
T ss_dssp HHHHHHTTHHHHHHHHTTTCCEEEEEECCTTS
T ss_pred hHHHHHHHHHHHHHHHhCCCceEEEEeCCCCC
Confidence 99999999999999999999999999999997
No 9
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=99.97 E-value=2.6e-31 Score=185.42 Aligned_cols=99 Identities=30% Similarity=0.490 Sum_probs=81.6
Q ss_pred CCCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcC-------CCCCCCceeeecceeeCC-------CC
Q psy7619 4 YDENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLK-------PRQPGKARRFTFDAVYGM-------QA 69 (102)
Q Consensus 4 ~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~-------~~~~~~~~~f~FD~Vf~~-------~~ 69 (102)
..++|+|+|||||++++|...+..+++.+++....+.+..|..... .......+.|+||+||++ .+
T Consensus 36 ~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~~~~~a 115 (443)
T 2owm_A 36 PGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTEDEHYA 115 (443)
T ss_dssp CCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTTSTTCC
T ss_pred CCCCeEEEEEeCCCChHHhhcCCceEEEEcCCCccEEEecCCCcccccccccccccccCCceEecCeEeCCCCcCCccCC
Confidence 4579999999999999999989999999988777777766543211 011234689999999976 48
Q ss_pred ChHHHHHHhHHHHHHHhhCcccEEEEEeccCCC
Q psy7619 70 TQTEIYENSVRPMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 70 sq~~vy~~~~~~~v~~~l~G~n~~i~aYGqTgS 102 (102)
+|++||+.++.|+|+.+|+|||+||||||||||
T Consensus 116 sQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGS 148 (443)
T 2owm_A 116 TQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGS 148 (443)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTS
T ss_pred CHHHHHHhhhhhHHHHhhcCCceEEEEeCCCCC
Confidence 999999999999999999999999999999997
No 10
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=99.97 E-value=6.7e-31 Score=179.86 Aligned_cols=91 Identities=34% Similarity=0.599 Sum_probs=78.3
Q ss_pred CCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCC--------CChHHHHH
Q psy7619 5 DENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQ--------ATQTEIYE 76 (102)
Q Consensus 5 ~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~--------~sq~~vy~ 76 (102)
.++|+|+||+||++.+|...+..+++.++++ .+.+..|.. .....+.|.||+||+++ ++|++||+
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~--~~~i~~~~~-----~~~~~~~f~FD~vf~~~~~~~~~~~asQ~~Vy~ 75 (366)
T 2zfi_A 3 GASVKVAVRVRPFNSREMSRDSKCIIQMSGS--TTTIVNPKQ-----PKETPKSFSFDYSYWSHTSPEDINYASQKQVYR 75 (366)
T ss_dssp -CCEEEEEEECCCCHHHHHTTCCBCEEEETT--EEEECCTTC-----TTSCCEEEECSEEEECSSCTTSSSCCCHHHHHH
T ss_pred CCCcEEEEECCCCChhhccCCCCeEEEECCC--cEEEeccCC-----CCCCceEEecceEeecCccccccccCcHHHHHH
Confidence 5699999999999999998888888888753 555555543 23457899999999987 89999999
Q ss_pred HhHHHHHHHhhCcccEEEEEeccCCC
Q psy7619 77 NSVRPMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 77 ~~~~~~v~~~l~G~n~~i~aYGqTgS 102 (102)
.+++|+|+.+|+|||+||||||||||
T Consensus 76 ~~~~plv~~~l~G~N~tifAYGqTGS 101 (366)
T 2zfi_A 76 DIGEEMLQHAFEGYNVCIFAYGQTGA 101 (366)
T ss_dssp HTHHHHHHHHHTTCCEEEEEECSTTS
T ss_pred HHHHHHHHHHhcCCeeEEEEeCCCCC
Confidence 99999999999999999999999997
No 11
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=99.97 E-value=4.8e-31 Score=178.22 Aligned_cols=86 Identities=34% Similarity=0.601 Sum_probs=75.8
Q ss_pred CCCCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHHHH
Q psy7619 3 SYDENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVRPM 82 (102)
Q Consensus 3 ~~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~~ 82 (102)
..+++|+|+||+||++.+|...+...++.+..+ ..+.+. .+.|.||+||+++++|++||+.+++|+
T Consensus 4 ~~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~-~~~~~~-------------~~~f~FD~Vf~~~~sQ~~Vy~~~~~pl 69 (325)
T 1bg2_A 4 LAECNIKVMCRFRPLNESEVNRGDKYIAKFQGE-DTVVIA-------------SKPYAFDRVFQSSTSQEQVYNDCAKKI 69 (325)
T ss_dssp CSSCEEEEEEEECCCCHHHHHHTCCBCCEEETT-TEEEET-------------TEEEECSEEECTTCCHHHHHHHHTHHH
T ss_pred CCCCCEEEEEEcCCCChhHhccCCeeEEEECCC-CeEEEC-------------CEEEECCeEeCCCCCHHHHHHHHhhhh
Confidence 457899999999999999998888777777654 445431 468999999999999999999999999
Q ss_pred HHHhhCcccEEEEEeccCCC
Q psy7619 83 VNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 83 v~~~l~G~n~~i~aYGqTgS 102 (102)
|+.+|+|||+||||||||||
T Consensus 70 v~~~l~G~n~tifAYGqTGS 89 (325)
T 1bg2_A 70 VKDVLEGYNGTIFAYGQTSS 89 (325)
T ss_dssp HHHHHTTCCEEEEEECSTTS
T ss_pred HHHHhCCCeEEEEEECCCCC
Confidence 99999999999999999997
No 12
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=99.97 E-value=6.1e-31 Score=180.38 Aligned_cols=92 Identities=36% Similarity=0.670 Sum_probs=78.4
Q ss_pred CCCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHHHHH
Q psy7619 4 YDENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVRPMV 83 (102)
Q Consensus 4 ~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~~v 83 (102)
..++|+|+||+||++.+|...+...++.+... ..+.+..+. .....+.|.||+||+++++|++||+.+++|+|
T Consensus 21 ~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~-~~~~~~~~~------~~~~~~~F~FD~vf~~~~~Q~~Vy~~~~~plv 93 (373)
T 2wbe_C 21 SNQNIQVYVRVRPLNSRERCIRSAEVVDVVGP-REVVTRHTL------DSKLTKKFTFDRSFGPESKQCDVYSVVVSPLI 93 (373)
T ss_dssp CCEECEEEEEECCCCHHHHHHTCCBCEEEETT-TEEEESSSS------SSTTCEEEECSEEECTTCCHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEcCCCChhhhccCCCceEEEcCC-CeEEEecCC------CCCCceEEeccEEeccccchhHHHHHHHHHHH
Confidence 46799999999999999988777778877654 445554332 22456889999999999999999999999999
Q ss_pred HHhhCcccEEEEEeccCCC
Q psy7619 84 NHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 84 ~~~l~G~n~~i~aYGqTgS 102 (102)
+.+|+|||+||||||||||
T Consensus 94 ~~~l~G~n~tifAYGqTGS 112 (373)
T 2wbe_C 94 EEVLNGYNCTVFAYGQTGT 112 (373)
T ss_dssp HHHHHTCCEEEEEECSTTS
T ss_pred HHHhCCceEEEEeecCCCC
Confidence 9999999999999999997
No 13
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=99.97 E-value=6.8e-31 Score=179.69 Aligned_cols=86 Identities=41% Similarity=0.726 Sum_probs=75.0
Q ss_pred CCCceEEEEEeCCCChhhhhcCCccEEEEcCC--CcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHHH
Q psy7619 4 YDENIKVVVRCRPMNVPERKAHVENVIKIDTT--KKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVRP 81 (102)
Q Consensus 4 ~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~--~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~ 81 (102)
.+++|+|+||+||++..|...+...++.+..+ ..++.+ ..+.|.||+||+++++|++||+.+++|
T Consensus 9 ~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~-------------~~~~f~FD~Vf~~~~~Q~~Vy~~~~~p 75 (365)
T 2y65_A 9 AEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISI-------------AGKVYLFDKVFKPNASQEKVYNEAAKS 75 (365)
T ss_dssp CEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEE-------------TTEEEECSEEECTTCCHHHHHHHHTHH
T ss_pred CCCCeEEEEEcCcCChhHhccCCceEEEeCCCCCCcEEEE-------------CCEEEeCceEecCCCCHHHHHHHhhhh
Confidence 45799999999999999988887777777653 344433 247899999999999999999999999
Q ss_pred HHHHhhCcccEEEEEeccCCC
Q psy7619 82 MVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 82 ~v~~~l~G~n~~i~aYGqTgS 102 (102)
+|+.+|+|||+||||||||||
T Consensus 76 lv~~~l~G~n~tifAYGqTGS 96 (365)
T 2y65_A 76 IVTDVLAGYNGTIFAYGQTSS 96 (365)
T ss_dssp HHHHHHTTCCEEEEEECSTTS
T ss_pred HHHHHhCCCceEEEeecCCCC
Confidence 999999999999999999997
No 14
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=99.97 E-value=5.8e-31 Score=180.93 Aligned_cols=95 Identities=31% Similarity=0.518 Sum_probs=62.3
Q ss_pred CCCCCCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHH
Q psy7619 1 MKSYDENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVR 80 (102)
Q Consensus 1 ~~~~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~ 80 (102)
++...++|+|+|||||++..|...+...++.... ...+.+..+. .....+.|.||+||+++++|++||+.+++
T Consensus 16 ~~~~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~-~~~~~i~~~~------~~~~~~~f~FD~Vf~~~~tQ~~Vy~~~~~ 88 (388)
T 3bfn_A 16 FQGPPARVRVAVRLRPFVDGTAGASDPPCVRGMD-SCSLEIANWR------NHQETLKYQFDAFYGERSTQQDIYAGSVQ 88 (388)
T ss_dssp SSSCCCCCEEEEEECCCC------------------------------------CEEEEECSEEECTTCCHHHHHHHHTG
T ss_pred ccCCCCCEEEEEECCCCChhhhccCCCceEEecC-CCeEEEecCC------CCCCeeEEEcceEecCCCCHhHHHHHHHH
Confidence 3567799999999999999987665444444322 2344444332 22356789999999999999999999999
Q ss_pred HHHHHhhCcccEEEEEeccCCC
Q psy7619 81 PMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 81 ~~v~~~l~G~n~~i~aYGqTgS 102 (102)
|+|+.+|+|||+||||||||||
T Consensus 89 plv~~~l~G~N~tifAYGqTGS 110 (388)
T 3bfn_A 89 PILRHLLEGQNASVLAYGPTGA 110 (388)
T ss_dssp GGHHHHTTTCCEEEEEESCTTS
T ss_pred HHHHHhhcCceeeEeeecCCCC
Confidence 9999999999999999999997
No 15
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=99.97 E-value=6.1e-31 Score=179.10 Aligned_cols=88 Identities=31% Similarity=0.539 Sum_probs=72.5
Q ss_pred CCCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHHHHH
Q psy7619 4 YDENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVRPMV 83 (102)
Q Consensus 4 ~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~~v 83 (102)
+.++|+|+||+||++.+|...+...++.+..+...+... ...+.|.||+||+++++|++||+.+++|+|
T Consensus 2 e~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~-----------~~~~~F~FD~Vf~~~~tQ~~Vy~~~~~plv 70 (349)
T 1t5c_A 2 EEGAVAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQV-----------DGSKSFNFDRVFHGNETTKNVYEEIAAPII 70 (349)
T ss_dssp -CCCEEEEEEECCCSCSSCTTTTCCCCCEEEETTEEEET-----------TSSCEEECSCEECTTSCHHHHHHHTTHHHH
T ss_pred CCCCEEEEEECCCCChhhhccCCCcEEEEeCCCCeEEEC-----------CCCeEEECCEEECCCCCHHHHHHHHHHHHH
Confidence 578999999999999999876665544444333444321 135789999999999999999999999999
Q ss_pred HHhhCcccEEEEEeccCCC
Q psy7619 84 NHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 84 ~~~l~G~n~~i~aYGqTgS 102 (102)
+.+|+|||+||||||||||
T Consensus 71 ~~~l~G~n~tifAYGqTGS 89 (349)
T 1t5c_A 71 DSAIQGYNGTIFAYGQTAS 89 (349)
T ss_dssp HHHHTTCCEEEEEEESTTS
T ss_pred HHHHcCCccceeeecCCCC
Confidence 9999999999999999997
No 16
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=99.97 E-value=2.1e-30 Score=176.76 Aligned_cols=95 Identities=32% Similarity=0.554 Sum_probs=74.8
Q ss_pred CceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCc-CCCCCCCceeeecceee--------CCCCChHHHHH
Q psy7619 6 ENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRL-KPRQPGKARRFTFDAVY--------GMQATQTEIYE 76 (102)
Q Consensus 6 ~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~-~~~~~~~~~~f~FD~Vf--------~~~~sq~~vy~ 76 (102)
++|+|+||+||++.+|...+..+++.++.. .+.+..+.... ........+.|.||+|| ++.++|++||+
T Consensus 1 S~VkV~vRvRPl~~~E~~~~~~~vv~~~~~--~~~~~~~~~~~~~~~~~~~~k~F~FD~vF~~~d~~~~~~~a~Q~~vy~ 78 (354)
T 3gbj_A 1 SKVKVAVRIRPMNRRETDLHTKCVVDVDAN--KVILNPVNTNLSKGDARGQPKVFAYDHCFWSMDESVKEKYAGQDIVFK 78 (354)
T ss_dssp -CEEEEEEECCCCHHHHHHTCCBCEEEETT--EEEECCC-----------CCEEEECSEEEECSCTTCTTTBCCHHHHHH
T ss_pred CCcEEEEECCCCChhhhccCCceEEEeCCC--eEEEeCCccccccccccCCceEEEeeEEeccCccccccccccHHHHHH
Confidence 489999999999999998888888888753 45554443221 11233457899999999 45689999999
Q ss_pred HhHHHHHHHhhCcccEEEEEeccCCC
Q psy7619 77 NSVRPMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 77 ~~~~~~v~~~l~G~n~~i~aYGqTgS 102 (102)
.++.|+|+.+|+|||+||||||||||
T Consensus 79 ~~~~~lv~~~l~G~n~tifAYGqTGS 104 (354)
T 3gbj_A 79 CLGENILQNAFDGYNACIFAYGQTGS 104 (354)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEECTTS
T ss_pred HhhHHHHHHHhCCceeEEEeeCCCCC
Confidence 99999999999999999999999997
No 17
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=99.97 E-value=7.7e-31 Score=179.16 Aligned_cols=95 Identities=29% Similarity=0.501 Sum_probs=78.8
Q ss_pred ceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHHHHHHHh
Q psy7619 7 NIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVRPMVNHM 86 (102)
Q Consensus 7 ~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~~v~~~ 86 (102)
+|||+||+||++..|...+..+++.+.+ ...+.+..|............+.|.||+||+++++|++||+.+++|+|..+
T Consensus 1 ~IrV~vRvRP~~~~E~~~~~~~~v~~~~-~~~i~i~~~~~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~plv~~~ 79 (360)
T 1ry6_A 1 MIKVVVRKRPLSELEKKKKDSDIITVKN-NCTLYIDEPRYKVDMTKYIERHEFIVDKVFDDTVDNFTVYENTIKPLIIDL 79 (360)
T ss_dssp CEEEEEEECCCCHHHHHTTCCBCEEEEE-TTEEEEEEEEEETTTEEEEEEEEEECSEEECTTCCHHHHHHHHTHHHHHHH
T ss_pred CeEEEEECCCCChHHhccCCceEEEECC-CCEEEEeCCccccccccccccceEEeeeEecCCCCHHHHHHHHhhhhhhhh
Confidence 6999999999999999888888888764 467777666532221111235789999999999999999999999999999
Q ss_pred hC-cccEEEEEeccCCC
Q psy7619 87 LH-GYNVTIFAYGQTGT 102 (102)
Q Consensus 87 l~-G~n~~i~aYGqTgS 102 (102)
++ ||||||||||||||
T Consensus 80 ~~~G~n~tifAYGqTGS 96 (360)
T 1ry6_A 80 YENGCVCSCFAYGQTGS 96 (360)
T ss_dssp HHHCCEEEEEEECCTTS
T ss_pred ccCCceeEEEeeCCCCC
Confidence 96 99999999999997
No 18
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=99.97 E-value=2.4e-30 Score=176.66 Aligned_cols=93 Identities=28% Similarity=0.495 Sum_probs=74.3
Q ss_pred CCCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcC--CCCCCCceeeecceeeCCCCChHHHHHHhHHH
Q psy7619 4 YDENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLK--PRQPGKARRFTFDAVYGMQATQTEIYENSVRP 81 (102)
Q Consensus 4 ~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~--~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~ 81 (102)
..++|||+|||||++..|. ..+....+...+.+..+..... .......+.|.||+||+ +++|++||+.+++|
T Consensus 22 ~~~~i~V~vRvRP~~~~e~-----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~F~FD~Vf~-~~sQ~~Vy~~~~~p 95 (359)
T 3nwn_A 22 TRKKVHAFVRVKPTDDFAH-----EMIRYGDDKRSIDIHLKKDIRRGVVNNQQTDWSFKLDGVLH-DASQDLVYETVAKD 95 (359)
T ss_dssp --CCEEEEEEECCCSSCCT-----TTEEECTTSSEEEEECCCCSSHHHHTTSCCEEEEECSEEEE-SCCHHHHHHHHTHH
T ss_pred CCCCEEEEEEcCCCCcccc-----cceeecCCCcEEEEecCCccccccccCCcCceEeecCccCC-CCCHHHHHHHHHHH
Confidence 3579999999999975553 3466666777888876654321 12345678899999996 68999999999999
Q ss_pred HHHHhhCcccEEEEEeccCCC
Q psy7619 82 MVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 82 ~v~~~l~G~n~~i~aYGqTgS 102 (102)
+|+.+|+|||+||||||||||
T Consensus 96 lv~~~l~G~N~tifAYGQTGS 116 (359)
T 3nwn_A 96 VVSQALDGYNGTIMCYGQTGA 116 (359)
T ss_dssp HHHHHHTTCCEEEEEEESTTS
T ss_pred HHHHHhCCCCEEEEEeCCCCC
Confidence 999999999999999999998
No 19
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=99.96 E-value=8.8e-30 Score=173.06 Aligned_cols=85 Identities=28% Similarity=0.525 Sum_probs=65.6
Q ss_pred CCCceEEEEEeCCCChhhhhcCCccEEEEcC--CCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHHH
Q psy7619 4 YDENIKVVVRCRPMNVPERKAHVENVIKIDT--TKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVRP 81 (102)
Q Consensus 4 ~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~--~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~ 81 (102)
+.++|||+||+||+++.|.. +...++...+ +...+.+ ..+.|.||+||+++++|++||+.+++|
T Consensus 20 ~~~~VrV~vRvRP~~~~e~~-~~~~~v~~~~~~~~~~~~~-------------~~~~F~FD~Vf~~~~sQ~~Vy~~~~~p 85 (344)
T 3dc4_A 20 KLSAVRIAVREAPYRQFLGR-REPSVVQFPPWSDGKSLIV-------------DQNEFHFDHAFPATISQDEMYQALILP 85 (344)
T ss_dssp CCSEEEEEEEECCCC--------CCSEECCSSSCSSEEEE-------------TTEEEECSEEECTTCCHHHHHHHHTHH
T ss_pred CCCCeEEEEECCCCCccccc-CCceEEEecCCCCCceEEe-------------cCcEEEcceEECCCCCHHHHHHhhccc
Confidence 45799999999999887733 3444555543 2233332 257899999999999999999999999
Q ss_pred HHHHhhCcccEEEEEeccCCC
Q psy7619 82 MVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 82 ~v~~~l~G~n~~i~aYGqTgS 102 (102)
+|+.+|+|||+||||||||||
T Consensus 86 lv~~~l~G~N~tifAYGQTGS 106 (344)
T 3dc4_A 86 LVDKLLEGFQCTALAYGQTGT 106 (344)
T ss_dssp HHHHHHHTCCEEEEEESSTTS
T ss_pred hhhHhhCCCceEEEEecCCCC
Confidence 999999999999999999997
No 20
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=99.96 E-value=4.1e-30 Score=176.34 Aligned_cols=99 Identities=33% Similarity=0.487 Sum_probs=67.1
Q ss_pred CCCCceEEEEEeCCCChhhhhcCCccEEEEc------CCCcEEEEeccCCCcC----CCCCCCceeeecceeeCCCCChH
Q psy7619 3 SYDENIKVVVRCRPMNVPERKAHVENVIKID------TTKKCLSIQYSTDRLK----PRQPGKARRFTFDAVYGMQATQT 72 (102)
Q Consensus 3 ~~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~------~~~~~i~i~~~~~~~~----~~~~~~~~~f~FD~Vf~~~~sq~ 72 (102)
...++|+|+|||||+++.|...+...+.... .+...+.+..+..... .......+.|.||+||+++++|+
T Consensus 19 ~~~~~irV~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~FD~Vf~~~~~Q~ 98 (376)
T 2rep_A 19 SLKGNIRVFCRVRPVLPGEPTPPPGLLLFPSGPGGPSDPPTRLSLSRSDERRGTLSGAPAPPPRHDFSFDRVFPPGSGQD 98 (376)
T ss_dssp ----CEEEEEEECCCCTTSCCCCGGGSBCCC------CCCCEEECCC-----------------CEEECSEEECTTCCHH
T ss_pred ccCCCeEEEEEcCCCChhhcccCCceEEEccCcccccCCCcEEEEecCCccccccccccCCCCceeeeecEEcCCcccch
Confidence 4568999999999999998765432221111 2345566654322111 01123457899999999999999
Q ss_pred HHHHHhHHHHHHHhhCcccEEEEEeccCCC
Q psy7619 73 EIYENSVRPMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 73 ~vy~~~~~~~v~~~l~G~n~~i~aYGqTgS 102 (102)
+||+.+ .++|+.+|+|||+||||||||||
T Consensus 99 ~Vy~~v-~~lv~~~l~G~N~tifAYGqTGS 127 (376)
T 2rep_A 99 EVFEEI-AMLVQSALDGYPVCIFAYGQTGS 127 (376)
T ss_dssp HHHHHH-HHHHHGGGGTCCEEEEEECSTTS
T ss_pred hhhhhH-HHHHHHhcCCCceEEEEeCCCCC
Confidence 999996 68999999999999999999997
No 21
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=99.96 E-value=1.6e-29 Score=172.18 Aligned_cols=91 Identities=35% Similarity=0.519 Sum_probs=69.6
Q ss_pred CCceEEEEEeCCCChhhhhcCCccEEEEc-C--CCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHHH
Q psy7619 5 DENIKVVVRCRPMNVPERKAHVENVIKID-T--TKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVRP 81 (102)
Q Consensus 5 ~~~i~V~vRvRP~~~~e~~~~~~~~~~~~-~--~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~ 81 (102)
.++|+|+|||||++..|...+...++... . ....+.+..+. .....+.|.||+||+++++|++||+.+ .|
T Consensus 4 kgnIrV~vRvRP~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~f~FD~Vf~~~~~Q~~vf~~v-~~ 76 (349)
T 3t0q_A 4 RGNIRVYCRVRPPLLNEPQDMSHILIEKFNEAKGAQSLTINRNE------GRILSYNFQFDMIFEPSHTNKEIFEEI-RQ 76 (349)
T ss_dssp -CEEEEEEEECCCCTTSCCCCTTEEECCCBC--CBEEEEEEECC--------CEEEEEEESEEECTTCCHHHHHHHH-HH
T ss_pred CCCcEEEEEeCCCCccccccCceEEEeeccCCCCceEEEEcCCC------CcccceeeecCEEECCCccHHHHHHHH-HH
Confidence 57999999999999988766544333321 1 12244454332 223467899999999999999999985 79
Q ss_pred HHHHhhCcccEEEEEeccCCC
Q psy7619 82 MVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 82 ~v~~~l~G~n~~i~aYGqTgS 102 (102)
+|+.+|+|||+||||||||||
T Consensus 77 lv~~~l~G~n~tifAYGqTGS 97 (349)
T 3t0q_A 77 LVQSSLDGYNVCIFAYGQTGS 97 (349)
T ss_dssp HHHGGGTTCEEEEEEECSTTS
T ss_pred HHHHHHCCcceeEEEeCCCCC
Confidence 999999999999999999997
No 22
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=99.96 E-value=2e-29 Score=170.61 Aligned_cols=88 Identities=32% Similarity=0.639 Sum_probs=69.6
Q ss_pred CCceEEEEEeCCCChhhhhcC-CccEEEEcCCC-cEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHHHH
Q psy7619 5 DENIKVVVRCRPMNVPERKAH-VENVIKIDTTK-KCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVRPM 82 (102)
Q Consensus 5 ~~~i~V~vRvRP~~~~e~~~~-~~~~~~~~~~~-~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~~ 82 (102)
.++|+|+||+||++.+|.... ...++.+++.+ ..+.+.. ....+.|.||+||+++++|++||+.+ .|+
T Consensus 3 ~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~f~FD~Vf~~~~~Q~~Vy~~v-~~l 72 (330)
T 2h58_A 3 KGNIRVIARVRPVTKEDGEGPEATNAVTFDADDDSIIHLLH---------KGKPVSFELDKVFSPQASQQDVFQEV-QAL 72 (330)
T ss_dssp --CEEEEEEECCCCGGGCSSGGGSBCEEECSSCTTEEEEEE---------TTEEEEEECSEEECTTCCHHHHHTTT-HHH
T ss_pred CCCEEEEEEcCCCChhhcccCCCccEEEEeCCCCcEEEEcC---------CCCeeEEecCeEeCCCCCcHhHHHHH-HHH
Confidence 579999999999999886432 34566666543 3343332 12467899999999999999999985 899
Q ss_pred HHHhhCcccEEEEEeccCCC
Q psy7619 83 VNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 83 v~~~l~G~n~~i~aYGqTgS 102 (102)
|+.+|+|||+||||||||||
T Consensus 73 v~~~l~G~n~tifAYGqTGS 92 (330)
T 2h58_A 73 VTSCIDGFNVCIFAYGQTGA 92 (330)
T ss_dssp HHHHHTTCCEEEEEESSTTS
T ss_pred HHHHhCCCEEEEEeECCCCC
Confidence 99999999999999999997
No 23
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=99.96 E-value=9.5e-29 Score=169.25 Aligned_cols=89 Identities=34% Similarity=0.569 Sum_probs=70.8
Q ss_pred CCCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHHHHH
Q psy7619 4 YDENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVRPMV 83 (102)
Q Consensus 4 ~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~~v 83 (102)
-.++|+|+||+||++..|...+....+.. .+...+.... .....+.|.||+||+++++|++||+. ++|+|
T Consensus 3 ~~~~i~V~vRvRP~~~~E~~~~~~~~~~~-~~~~~v~~~~--------~~~~~~~f~FD~Vf~~~~~Q~~Vy~~-~~~lv 72 (369)
T 3cob_A 3 MKGKIRVYCRLRPLCEKEIIAKERNAIRS-VDEFTVEHLW--------KDDKAKQHMYDRVFDGNATQDDVFED-TKYLV 72 (369)
T ss_dssp -CCBCEEEEEECCCCHHHHHTTCCBCEEE-CSSSEEEEEC--------TTSCEEEEECSEEECTTCCHHHHHHT-TTHHH
T ss_pred CCCCeEEEEECCCCChhhccCCCcEEEEc-CCcEEEEecC--------CCCCceEEecCEEECCCCCcceehhh-hhhhh
Confidence 45899999999999999987665444433 2333343322 12346899999999999999999999 69999
Q ss_pred HHhhCcccEEEEEeccCCC
Q psy7619 84 NHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 84 ~~~l~G~n~~i~aYGqTgS 102 (102)
+.+|+|||+||||||||||
T Consensus 73 ~~~l~G~n~tifAYGqTGS 91 (369)
T 3cob_A 73 QSAVDGYNVCIFAYGQTGS 91 (369)
T ss_dssp HHHHTTCEEEEEEEECTTS
T ss_pred HhhhcCCceEEEEECCCCC
Confidence 9999999999999999997
No 24
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=99.96 E-value=1.4e-28 Score=167.84 Aligned_cols=94 Identities=28% Similarity=0.491 Sum_probs=75.3
Q ss_pred CCCCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcC--CCCCCCceeeecceeeCCCCChHHHHHHhHH
Q psy7619 3 SYDENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLK--PRQPGKARRFTFDAVYGMQATQTEIYENSVR 80 (102)
Q Consensus 3 ~~~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~--~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~ 80 (102)
+..++|||+|||||+... ...++.++++...+.+..+..... .......+.|.||+|| ++++|++||+.+++
T Consensus 20 ~~~g~IrV~vRvRP~~~~-----~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~F~fD~Vf-~~~sQ~~Vy~~~~~ 93 (358)
T 2nr8_A 20 GTRKKVHAFVRVKPTDDF-----AHEMIRYGDDKRSIDIHLKKDIRRGVVNNQQTDWSFKLDGVL-HDASQDLVYETVAK 93 (358)
T ss_dssp ---CCEEEEEEECCCSSC-----CTTTEEECTTSSEEEEECCCCSSHHHHTTSCCEEEEECSEEE-ESCCHHHHHHHHTH
T ss_pred CCCCCeEEEEEcCCCCCC-----ccceeEECCCCCEEEEecCCccccccccCCCcceEEECCeec-CCcCHHHHHHHHHH
Confidence 346899999999998643 335677888888888877654321 1233457889999999 58999999999999
Q ss_pred HHHHHhhCcccEEEEEeccCCC
Q psy7619 81 PMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 81 ~~v~~~l~G~n~~i~aYGqTgS 102 (102)
|+|+.+|+|||+||||||||||
T Consensus 94 ~lv~~~l~G~N~tIfAYGqTGS 115 (358)
T 2nr8_A 94 DVVSQALDGYNGTIMCYGQTGA 115 (358)
T ss_dssp HHHHHHHTTCCEEEEEEESTTS
T ss_pred HHHHHHhCCCceEEEEECCCCC
Confidence 9999999999999999999997
No 25
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=99.95 E-value=2.1e-28 Score=166.54 Aligned_cols=90 Identities=29% Similarity=0.545 Sum_probs=68.1
Q ss_pred CCceEEEEEeCCCChhhhhcCCccEEEEcC-----CCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhH
Q psy7619 5 DENIKVVVRCRPMNVPERKAHVENVIKIDT-----TKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSV 79 (102)
Q Consensus 5 ~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~-----~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~ 79 (102)
.++|+|+|||||++..+. .....++.+.. ....+.+..+. .....+.|.||+||+++++|++||+.+
T Consensus 2 k~nIrV~vRvRP~~~~~e-~~~~~~~~v~~~~~~~~~~~~~~~~~~------~~~~~~~f~FD~Vf~~~~~Q~~Vy~~v- 73 (347)
T 1f9v_A 2 RGNIRVYCRIRPALKNLE-NSDTSLINVNEFDDNSGVQSMEVTKIQ------NTAQVHEFKFDKIFDQQDTNVDVFKEV- 73 (347)
T ss_dssp -CEEEEEEEECCCCTTTC-CCTTEEEEECCCBTTTTBEEEEEEEGG------GTTCEEEEEESEEECTTCCHHHHHHHH-
T ss_pred CCCeEEEEEeCCCCcccc-cCCCceEEEecccCCCCceEEEEecCC------CCcCceEEeeCEEECCCCCHHHHHHHH-
Confidence 479999999999987321 22334454432 12345555432 224568999999999999999999985
Q ss_pred HHHHHHhhCcccEEEEEeccCCC
Q psy7619 80 RPMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 80 ~~~v~~~l~G~n~~i~aYGqTgS 102 (102)
.|+|+.+|+|||+||||||||||
T Consensus 74 ~~lv~~~l~G~n~tifAYGqTGS 96 (347)
T 1f9v_A 74 GQLVQSSLDGYNVCIFAYGQTGS 96 (347)
T ss_dssp HHHHGGGGGTCCEEEEEECCTTS
T ss_pred HHHHHHhcCCceeEEEEECCCCC
Confidence 69999999999999999999997
No 26
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=99.95 E-value=1.8e-28 Score=169.89 Aligned_cols=93 Identities=32% Similarity=0.535 Sum_probs=70.0
Q ss_pred CCceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhHHHHHH
Q psy7619 5 DENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSVRPMVN 84 (102)
Q Consensus 5 ~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~~~~v~ 84 (102)
.++|+|+|||||+...|.... .+.+... +...+.+..+..... .....+.|.||+||+++++|++||+. +.|+|+
T Consensus 58 ~gnIrV~vRvRP~~~~E~~~~-~~~~~~~-~~~~v~~~~~~~~~~--~~~~~~~F~FD~VF~~~~~Q~~Vf~~-v~plv~ 132 (412)
T 3u06_A 58 RDNIRVFCRIRPPLESEENRM-CCTWTYH-DESTVELQSIDAQAK--SKMGQQIFSFDQVFHPLSSQSDIFEM-VSPLIQ 132 (412)
T ss_dssp TCSEEEEEEECCCCGGGTTSC-BCEEEEE-ETTEEEEECCC---------CCCEEECSEEECTTCCHHHHHTT-THHHHH
T ss_pred CCCEEEEEEcCCCCchhccCc-ceEEEec-CCCEEEEecCCcccc--cccCceEEeeCeEcCCCCCHHHHHHH-HHHHHH
Confidence 589999999999998886443 3344443 345666654433211 22235789999999999999999986 479999
Q ss_pred HhhCcccEEEEEeccCCC
Q psy7619 85 HMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 85 ~~l~G~n~~i~aYGqTgS 102 (102)
.+|+|||+||||||||||
T Consensus 133 ~~l~G~n~tifAYGqTGS 150 (412)
T 3u06_A 133 SALDGYNICIFAYGQTGS 150 (412)
T ss_dssp HHHTTCCEEEEEESSTTS
T ss_pred HHHCCCceEEEEecCCCC
Confidence 999999999999999997
No 27
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.5e-27 Score=165.04 Aligned_cols=90 Identities=29% Similarity=0.589 Sum_probs=66.5
Q ss_pred CCceEEEEEeCCCChhhhhcCCccEEEEcC---CC--cEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHHHHHHhH
Q psy7619 5 DENIKVVVRCRPMNVPERKAHVENVIKIDT---TK--KCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTEIYENSV 79 (102)
Q Consensus 5 ~~~i~V~vRvRP~~~~e~~~~~~~~~~~~~---~~--~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~vy~~~~ 79 (102)
.++|+|+|||||+...+.... ...+.+.. .. ..+.+..+. .....+.|.||+||+++++|++||+.+
T Consensus 58 kgnIrV~vRvRP~~~~~e~~~-~~~~~v~~~~~~~~~~~~~~~~~~------~~~~~~~F~FD~VF~~~~~Q~~Vf~~v- 129 (403)
T 4etp_A 58 RGNIRVYLRIRPALKNLENSD-TSLINVNEFDDNSGVQSMEVTKIQ------NTAQVHEFKFDKIFDQQDTNVDVFKEV- 129 (403)
T ss_dssp HCSEEEEEEECCCCTTTSCSC-CTTEEECCCBTTTTBEEEEEEECS------SSCEEEEEEESEEECTTCCHHHHHHHH-
T ss_pred CCCeEEEEEeCCCCCcccccC-CCeeEEeeccCCCCceEEEEecCC------CCcCceEEEcCEEECCCCchHHHHHHH-
Confidence 479999999999987632222 22333321 11 233333322 223468899999999999999999985
Q ss_pred HHHHHHhhCcccEEEEEeccCCC
Q psy7619 80 RPMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 80 ~~~v~~~l~G~n~~i~aYGqTgS 102 (102)
.|+|+.+|+|||+||||||||||
T Consensus 130 ~~lv~~~l~G~N~tifAYGqTGS 152 (403)
T 4etp_A 130 GQLVQSSLDGYNVAIFAYGQTGS 152 (403)
T ss_dssp HHHHHHHHTTCCEEEEEESCTTS
T ss_pred HHHHHHHhCCcceEEEEECCCCC
Confidence 58999999999999999999997
No 28
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=99.91 E-value=7.1e-25 Score=160.40 Aligned_cols=91 Identities=27% Similarity=0.474 Sum_probs=63.6
Q ss_pred CCceEEEEEeC----CCChhhhhcCCccEEEEc-------CCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChHH
Q psy7619 5 DENIKVVVRCR----PMNVPERKAHVENVIKID-------TTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQTE 73 (102)
Q Consensus 5 ~~~i~V~vRvR----P~~~~e~~~~~~~~~~~~-------~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~~ 73 (102)
-++++|||||| |....|...+... +.+. +....|.+..+.. +....+.|+||+||+++++|++
T Consensus 373 l~~~rV~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~f~fd~vf~~~~~q~~ 446 (715)
T 4h1g_A 373 KGNIRVFCRIRNVSSSSSSSSSSSSEDI-IQYEAPQDINDESKQELVITRNIN-----NNFSNLRFLFDKIFEREQSNDL 446 (715)
T ss_dssp SCSEEEEEEECCCC-------------B-CEEECCC-------CEEEEEEEET-----TEEEEEEEECSEEECSSCCHHH
T ss_pred HhcCeEEEEEeccccccccccccccccc-eeccCCCCCCCCCCCeEEEcCCCC-----CCCCCeEEEeceEeCCCCCHHH
Confidence 47899999999 4444444333322 2222 2345566665554 5567899999999999999999
Q ss_pred HHHHhHHHHHHHhhCcccEEEEEeccCCC
Q psy7619 74 IYENSVRPMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 74 vy~~~~~~~v~~~l~G~n~~i~aYGqTgS 102 (102)
||+.+ .|+|+.+|+|||+||||||||||
T Consensus 447 v~~~~-~~~v~~~~~G~n~~i~ayGqtgs 474 (715)
T 4h1g_A 447 VFEEL-SQLIQCSLDGTNVCVFAYGQTGS 474 (715)
T ss_dssp HGGGT-HHHHHHHHTTCCEEEEEESSTTS
T ss_pred HHHHH-HHHHHHHhCCceEEEEccCCCCC
Confidence 99976 68999999999999999999998
No 29
>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}
Probab=99.86 E-value=8.6e-22 Score=129.57 Aligned_cols=78 Identities=8% Similarity=0.057 Sum_probs=61.3
Q ss_pred CCceEEEEEeCCCC-hhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCCChH--HHHHHhHHH
Q psy7619 5 DENIKVVVRCRPMN-VPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQATQT--EIYENSVRP 81 (102)
Q Consensus 5 ~~~i~V~vRvRP~~-~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~sq~--~vy~~~~~~ 81 (102)
.++||||+|+||.. + ..+.+.... ..|.+ .. ..+.|.||+||++.++|+ +||+++ .+
T Consensus 23 KGnIRVFcrvrp~~~p------~~~~v~y~~--~~I~v-~~----------~~k~f~FDRVf~p~s~Qe~~~vf~E~-~~ 82 (298)
T 2o0a_A 23 KGTMRCYAYVMEQNLP------ENLLFDYEN--GVITQ-GL----------SEHVYKFNRVIPHLKVSEDKFFTQEY-SV 82 (298)
T ss_dssp HTCCEEEEEECGGGSC------TTEEEETTT--TEEEE-TT----------TCCEEECSEEEETTTSCHHHHHHHTT-HH
T ss_pred hCceEEEEEeccccCC------ccceeecCc--cceee-cC----------CCceEEeeeEECccccccHHHHHHHH-HH
Confidence 37999999999953 2 222233332 33554 21 137899999999999999 999995 99
Q ss_pred HHHHhhC-cccEEEEEeccCCC
Q psy7619 82 MVNHMLH-GYNVTIFAYGQTGT 102 (102)
Q Consensus 82 ~v~~~l~-G~n~~i~aYGqTgS 102 (102)
+|+.+|+ |||+||||||||||
T Consensus 83 ~i~scLd~GyNvcIfSyGQTGs 104 (298)
T 2o0a_A 83 YHDMCLNQKKNFNLISLSTTPH 104 (298)
T ss_dssp HHHHHHHTTCCEEEEEECSSCC
T ss_pred HHHHHHhCCCceEEEEECCCCC
Confidence 9999998 99999999999997
No 30
>4etp_B Spindle POLE BODY-associated protein VIK1; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=94.89 E-value=0.25 Score=33.31 Aligned_cols=76 Identities=12% Similarity=0.124 Sum_probs=50.5
Q ss_pred CceEEEEEeCCCChhhhhcCCccEEEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCCC--ChHHHHHHhHHHHH
Q psy7619 6 ENIKVVVRCRPMNVPERKAHVENVIKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQA--TQTEIYENSVRPMV 83 (102)
Q Consensus 6 ~~i~V~vRvRP~~~~e~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~~--sq~~vy~~~~~~~v 83 (102)
+.||+|+=+-.-. ...-+.++-.+++|. .....+.|.|++|++... .+..+|+++ ...+
T Consensus 59 G~IRcFAYi~~~~-------~p~~~~idY~~~~It-----------~~~~~~~y~FnRiIp~~~~~e~~~l~qE~-q~y~ 119 (333)
T 4etp_B 59 GTMRVYAYVMEQN-------LPENLLFDYENGVIT-----------QGLSEHVYKFNRVIPHLKVSEDCFFTQEY-SVYH 119 (333)
T ss_dssp TCCEEEEEECCSS-------CCSSCEEETTTTEEE-----------C--CCCEEECSEEEETTTCCHHHHHHHTT-HHHH
T ss_pred CcEEEEEEECccc-------CCccEEEecccceEe-----------ecCCcceEEEeeeechhhcchHHHHHHHH-HHHH
Confidence 4566666665421 111244555556664 123578899999997766 566677776 7888
Q ss_pred HHhh-CcccEEEEEeccC
Q psy7619 84 NHML-HGYNVTIFAYGQT 100 (102)
Q Consensus 84 ~~~l-~G~n~~i~aYGqT 100 (102)
+-.+ ++.|+.|+.-|+.
T Consensus 120 DmcL~~~~NfslIsis~~ 137 (333)
T 4etp_B 120 DMALNQKKNFNLISLSTT 137 (333)
T ss_dssp HHHHHTTCCEEEEEEESS
T ss_pred HHHHccCCCeeEEEecCC
Confidence 8888 8999999998753
No 31
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=74.70 E-value=1.2 Score=26.60 Aligned_cols=44 Identities=14% Similarity=0.101 Sum_probs=27.4
Q ss_pred eeecceeeCCCCChHHHHHHhHHHHHHHhhCcccEEEEEeccCCC
Q psy7619 58 RFTFDAVYGMQATQTEIYENSVRPMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 58 ~f~FD~Vf~~~~sq~~vy~~~~~~~v~~~l~G~n~~i~aYGqTgS 102 (102)
..+||..-.....|+++++.+ ..++..+-....-.++-||.+|+
T Consensus 6 ~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~l~G~~G~ 49 (180)
T 3ec2_A 6 NANLDTYHPKNVSQNRALLTI-RVFVHNFNPEEGKGLTFVGSPGV 49 (180)
T ss_dssp TCCSSSCCCCSHHHHHHHHHH-HHHHHSCCGGGCCEEEECCSSSS
T ss_pred hCccccccCCCHHHHHHHHHH-HHHHHhccccCCCEEEEECCCCC
Confidence 356777554455688888765 55665543222344566899986
No 32
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=70.27 E-value=3.4 Score=24.89 Aligned_cols=44 Identities=14% Similarity=0.133 Sum_probs=26.9
Q ss_pred eeecceeeCCCCChHHHHHHhHHHHHHHhhCccc-EEEEEeccCCC
Q psy7619 58 RFTFDAVYGMQATQTEIYENSVRPMVNHMLHGYN-VTIFAYGQTGT 102 (102)
Q Consensus 58 ~f~FD~Vf~~~~sq~~vy~~~~~~~v~~~l~G~n-~~i~aYGqTgS 102 (102)
..+||........+.++++.+ ...+...-.+.. ..++-||.+|+
T Consensus 21 ~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~G~~Gt 65 (202)
T 2w58_A 21 RASLSDVDLNDDGRIKAIRFA-ERFVAEYEPGKKMKGLYLHGSFGV 65 (202)
T ss_dssp CCCTTSSCCSSHHHHHHHHHH-HHHHHHCCSSCCCCEEEEECSTTS
T ss_pred cCCHhhccCCChhHHHHHHHH-HHHHHHhhhccCCCeEEEECCCCC
Confidence 456777554444666677753 455554433322 56778999986
No 33
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=62.83 E-value=5.7 Score=26.14 Aligned_cols=43 Identities=14% Similarity=0.302 Sum_probs=25.3
Q ss_pred eecceeeCCCCChHHHHHHhHHHHHHHhhCcccEEEEEeccCCC
Q psy7619 59 FTFDAVYGMQATQTEIYENSVRPMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 59 f~FD~Vf~~~~sq~~vy~~~~~~~v~~~l~G~n~~i~aYGqTgS 102 (102)
.+||........+..+++. +...+...-.+....|+-||.+|+
T Consensus 121 ~tfd~f~~~~~~~~~~~~~-~~~~i~~~~~~~~~~lll~G~~Gt 163 (308)
T 2qgz_A 121 IHLSDIDVNNASRMEAFSA-ILDFVEQYPSAEQKGLYLYGDMGI 163 (308)
T ss_dssp CCGGGSCCCSHHHHHHHHH-HHHHHHHCSCSSCCEEEEECSTTS
T ss_pred CCHhhCcCCChHHHHHHHH-HHHHHHhccccCCceEEEECCCCC
Confidence 5676644333355666663 455555544443456778999996
No 34
>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A
Probab=58.70 E-value=3.2 Score=27.31 Aligned_cols=21 Identities=19% Similarity=0.403 Sum_probs=14.2
Q ss_pred HHHHHHhhCcccEEEEEeccC
Q psy7619 80 RPMVNHMLHGYNVTIFAYGQT 100 (102)
Q Consensus 80 ~~~v~~~l~G~n~~i~aYGqT 100 (102)
......+++-++.+++||||+
T Consensus 55 ~~aA~~lm~~~~~i~~aYg~S 75 (269)
T 3otd_A 55 TKCAQTVMEELEDIVIAYGQS 75 (269)
T ss_dssp HHHHHHHHHHSSSEEEEEEET
T ss_pred HHHHHHHHHHcCCeEEEEecC
Confidence 333344455578899999986
No 35
>4epz_A Transcription anti-terminator antagonist UPXZ; transcription regulation, antagonist of transcription anti- termination; HET: MSE; 1.68A {Bacteroides uniformis atcc 8492}
Probab=48.66 E-value=1.4 Score=26.55 Aligned_cols=19 Identities=37% Similarity=0.690 Sum_probs=15.5
Q ss_pred HHHHHhhCcccEEEEEecc
Q psy7619 81 PMVNHMLHGYNVTIFAYGQ 99 (102)
Q Consensus 81 ~~v~~~l~G~n~~i~aYGq 99 (102)
.+.-.+|-|||+||+++|-
T Consensus 61 ~LCLaLLmGYnatiyd~ge 79 (162)
T 4epz_A 61 NLCLALLMGYNATIYDNGD 79 (162)
T ss_dssp HHHHHHHHHHHHCSCCCSC
T ss_pred HHHHHHHHhccchhhhCcc
Confidence 4556788999999999884
No 36
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=44.83 E-value=20 Score=23.16 Aligned_cols=42 Identities=12% Similarity=0.192 Sum_probs=24.6
Q ss_pred cceeeCCCCChHHHHHHhHHHHHHHhhC--ccc--EEEEEeccCCC
Q psy7619 61 FDAVYGMQATQTEIYENSVRPMVNHMLH--GYN--VTIFAYGQTGT 102 (102)
Q Consensus 61 FD~Vf~~~~sq~~vy~~~~~~~v~~~l~--G~n--~~i~aYGqTgS 102 (102)
||..|+..---+.+-+.++..++...+. |.. -.++-||.+|+
T Consensus 2 ~~~~~~~~y~~~~~~~~~~~~~~k~~l~~~~~~~p~~lLl~GppGt 47 (293)
T 3t15_A 2 LDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQ 47 (293)
T ss_dssp CCCEETTEECCHHHHHHHHHHHHHTTSCCTTCCCCSEEEEEECTTS
T ss_pred cccccCcccCCHHHHHHHHHHHHHHHHhcCCCCCCeEEEEECCCCC
Confidence 4444444334456666777777766553 221 24667899985
No 37
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=41.61 E-value=29 Score=23.13 Aligned_cols=27 Identities=7% Similarity=0.217 Sum_probs=17.9
Q ss_pred HHhHHHHHHHhhCcccEEEEEeccCCC
Q psy7619 76 ENSVRPMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 76 ~~~~~~~v~~~l~G~n~~i~aYGqTgS 102 (102)
+.+...+-..+-.|...+++-||.+|+
T Consensus 30 ~~i~~~L~~~i~~~~~~~lli~GpPGT 56 (318)
T 3te6_A 30 TRIFLPIYDSLMSSQNKLFYITNADDS 56 (318)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEECCCSH
T ss_pred HHHHHHHHHHhcCCCCCeEEEECCCCC
Confidence 343333444445677889999999985
No 38
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=40.75 E-value=35 Score=19.45 Aligned_cols=23 Identities=13% Similarity=0.199 Sum_probs=15.1
Q ss_pred HHHHHHhhCcccEEEEEeccCCC
Q psy7619 80 RPMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 80 ~~~v~~~l~G~n~~i~aYGqTgS 102 (102)
..++..+..+....++-||..|+
T Consensus 32 ~~l~~~l~~~~~~~~ll~G~~G~ 54 (195)
T 1jbk_A 32 RRTIQVLQRRTKNNPVLIGEPGV 54 (195)
T ss_dssp HHHHHHHTSSSSCEEEEECCTTS
T ss_pred HHHHHHHhcCCCCceEEECCCCC
Confidence 33444445565667888999986
No 39
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=35.81 E-value=21 Score=22.41 Aligned_cols=38 Identities=24% Similarity=0.331 Sum_probs=15.1
Q ss_pred eecceeeCCCCChHHHHHHhHHHHHHHhhCcccEEEEEeccCCC
Q psy7619 59 FTFDAVYGMQATQTEIYENSVRPMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 59 f~FD~Vf~~~~sq~~vy~~~~~~~v~~~l~G~n~~i~aYGqTgS 102 (102)
|+||.+.+.+..-..+.+. +..+... +..|+-||.+|+
T Consensus 3 ~~f~~~ig~~~~~~~~~~~-----~~~~~~~-~~~vll~G~~Gt 40 (265)
T 2bjv_A 3 EYKDNLLGEANSFLEVLEQ-----VSHLAPL-DKPVLIIGERGT 40 (265)
T ss_dssp -------CCCHHHHHHHHH-----HHHHTTS-CSCEEEECCTTS
T ss_pred cccccceeCCHHHHHHHHH-----HHHHhCC-CCCEEEECCCCC
Confidence 6778776543333333322 2333322 345777999996
No 40
>1cix_A Protein (tachystatin A); antimicrobial peptide, chitin-binding peptide; NMR {Tachypleus tridentatus} SCOP: g.3.6.2
Probab=35.43 E-value=3.4 Score=18.92 Aligned_cols=14 Identities=36% Similarity=0.797 Sum_probs=11.3
Q ss_pred hhCcccEEEEEecc
Q psy7619 86 MLHGYNVTIFAYGQ 99 (102)
Q Consensus 86 ~l~G~n~~i~aYGq 99 (102)
.|+|+||-|..||.
T Consensus 5 ~~~g~~c~v~s~gl 18 (44)
T 1cix_A 5 QLQGFNCVVRSYGL 18 (44)
T ss_dssp CCTTEEECSCCTTS
T ss_pred EEecceEEEEeCCC
Confidence 47899999888874
No 41
>4hpq_A ATG31, KLTH0C07942P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=33.54 E-value=25 Score=18.02 Aligned_cols=13 Identities=38% Similarity=0.309 Sum_probs=9.5
Q ss_pred CCCceEEEEEeCC
Q psy7619 4 YDENIKVVVRCRP 16 (102)
Q Consensus 4 ~~~~i~V~vRvRP 16 (102)
.+.|..|+||+.-
T Consensus 2 n~~NttVyVRlPg 14 (69)
T 4hpq_A 2 NSENTIVYVRVAG 14 (69)
T ss_dssp CSSSCEEEEECSS
T ss_pred CCCCeEEEEEecC
Confidence 3567889999853
No 42
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=32.34 E-value=41 Score=19.20 Aligned_cols=23 Identities=13% Similarity=0.199 Sum_probs=14.9
Q ss_pred HHHHHHhhCcccEEEEEeccCCC
Q psy7619 80 RPMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 80 ~~~v~~~l~G~n~~i~aYGqTgS 102 (102)
..++..+..+....++-||.+|+
T Consensus 32 ~~l~~~l~~~~~~~vll~G~~G~ 54 (187)
T 2p65_A 32 RRAIQILSRRTKNNPILLGDPGV 54 (187)
T ss_dssp HHHHHHHTSSSSCEEEEESCGGG
T ss_pred HHHHHHHhCCCCCceEEECCCCC
Confidence 33444445555667788999885
No 43
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=31.70 E-value=80 Score=19.39 Aligned_cols=30 Identities=13% Similarity=0.345 Sum_probs=23.6
Q ss_pred hHHHHHHhHHHHHHHhhCcccEEEEEeccC
Q psy7619 71 QTEIYENSVRPMVNHMLHGYNVTIFAYGQT 100 (102)
Q Consensus 71 q~~vy~~~~~~~v~~~l~G~n~~i~aYGqT 100 (102)
-+..+++.+..+++.+.+|.+.++++.|-.
T Consensus 76 ~~~~~~~~~~~i~~~~~~g~~V~~l~~GDP 105 (232)
T 2qbu_A 76 LESHWDSAARMVAAELEDGRDVAFITLGDP 105 (232)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEESBCT
T ss_pred HHHHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 345677777788888889999999998854
No 44
>4gkp_A Spindle POLE BODY-associated protein VIK1; kinesin motor domain-like fold, microtubule binding protein, KAR3, structural protein; 2.42A {Candida glabrata} PDB: 4gkq_A
Probab=31.12 E-value=1e+02 Score=20.34 Aligned_cols=58 Identities=10% Similarity=0.253 Sum_probs=36.8
Q ss_pred EEEcCCCcEEEEeccCCCcCCCCCCCceeeecceeeCCC--CChHHHHHHhHHHHHHHhh-CcccEEEEEecc
Q psy7619 30 IKIDTTKKCLSIQYSTDRLKPRQPGKARRFTFDAVYGMQ--ATQTEIYENSVRPMVNHML-HGYNVTIFAYGQ 99 (102)
Q Consensus 30 ~~~~~~~~~i~i~~~~~~~~~~~~~~~~~f~FD~Vf~~~--~sq~~vy~~~~~~~v~~~l-~G~n~~i~aYGq 99 (102)
+.++=..++|. .....+.|.|+||-+.. .-++-+++++ ..-.+-.| ++.|++++.-++
T Consensus 30 ~~IdY~~~tI~-----------~~~~~~~y~F~RiIp~~~~~e~~ll~qE~-~~Y~DmCL~k~~NfnlISiS~ 90 (275)
T 4gkp_A 30 LIVNYSDESIE-----------DMKNHKTYKFTKLIQNFSHQNKDLFKEDL-HVYIDFCLKRRENFNLFSVGS 90 (275)
T ss_dssp EEEETTTTEEE-----------ETTTTEEEECSEEEEECSSSCCCGGGTHH-HHHHHHHHHTTCCEEEEEECC
T ss_pred EEEecccceec-----------cCCCccEEEEEeeeccccCCHHHHHHHHH-HHHHHHHhccCCCceEEEecC
Confidence 45555556664 12346889999999554 3344455555 44445544 789999998765
No 45
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=29.46 E-value=45 Score=20.76 Aligned_cols=44 Identities=16% Similarity=0.208 Sum_probs=25.2
Q ss_pred eeecceeeCCCCChHHHHHHhHHHHH-HHhh----CcccEEEEEeccCCC
Q psy7619 58 RFTFDAVYGMQATQTEIYENSVRPMV-NHML----HGYNVTIFAYGQTGT 102 (102)
Q Consensus 58 ~f~FD~Vf~~~~sq~~vy~~~~~~~v-~~~l----~G~n~~i~aYGqTgS 102 (102)
.+.|+.+.+.+...+.+.+.+ ..+- ...+ ......++-||.+|+
T Consensus 7 ~~~~~~i~G~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~vll~G~~Gt 55 (268)
T 2r62_A 7 NVRFKDMAGNEEAKEEVVEIV-DFLKYPERYANLGAKIPKGVLLVGPPGT 55 (268)
T ss_dssp CCCSTTSSSCTTTHHHHHHHH-HHHHCHHHHHHHSCCCCSCCCCBCSSCS
T ss_pred CCCHHHhCCcHHHHHHHHHHH-HHHHChHHHHHCCCCCCceEEEECCCCC
Confidence 467888888777777666543 2211 1111 112233778899986
No 46
>2e52_A Type II restriction enzyme HINDIII; type II restriction enzyme HINDIII(E.C.3.1.21.4)/DNA, hydrol complex; HET: DNA; 2.00A {Haemophilus influenzae} PDB: 3a4k_A*
Probab=27.67 E-value=30 Score=22.98 Aligned_cols=32 Identities=9% Similarity=0.171 Sum_probs=25.8
Q ss_pred eeCCCCChHHHHHHhHHHHHHHhhC--cccEEEE
Q psy7619 64 VYGMQATQTEIYENSVRPMVNHMLH--GYNVTIF 95 (102)
Q Consensus 64 Vf~~~~sq~~vy~~~~~~~v~~~l~--G~n~~i~ 95 (102)
.+.++++||.+|...+.-++...+. |+++.++
T Consensus 53 ~y~~dSSeEkLySK~~D~lla~~~~~mg~~a~vl 86 (300)
T 2e52_A 53 AIKPSSTQEKLFSKAGDIVLAKAFQLLNLNSKPL 86 (300)
T ss_dssp TSCTTSHHHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred cccCCchHHHHHHHHHHHHHHHHHHHcCcchhhh
Confidence 4678999999999998888877763 8877654
No 47
>2vpb_B B-cell CLL/lymphoma 9 protein; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_B 2vp7_B 2vpg_B* 2vpe_B*
Probab=27.54 E-value=9.7 Score=16.88 Aligned_cols=21 Identities=19% Similarity=0.297 Sum_probs=15.9
Q ss_pred HhHHHHHHHhhCcccEEEEEe
Q psy7619 77 NSVRPMVNHMLHGYNVTIFAY 97 (102)
Q Consensus 77 ~~~~~~v~~~l~G~n~~i~aY 97 (102)
.++..--+.+++|.--+|+||
T Consensus 13 ~lANkaAeaVl~G~~~sIIay 33 (35)
T 2vpb_B 13 EMANKAAEAVLKGQVETIVSF 33 (35)
T ss_dssp HHHHHHHHHHHTTSCSSTTCC
T ss_pred HHhhhHHHHHHcCcccceeee
Confidence 345566678899988888887
No 48
>1qde_A EIF4A, translation initiation factor 4A; DEAD box protein family, gene regulation; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 1qva_A
Probab=25.42 E-value=63 Score=19.35 Aligned_cols=19 Identities=26% Similarity=0.545 Sum_probs=13.0
Q ss_pred HHHHhhCcccEEEEEeccCCC
Q psy7619 82 MVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 82 ~v~~~l~G~n~~i~aYGqTgS 102 (102)
.+..+++|.| ++..++|||
T Consensus 44 ~i~~~~~~~~--~lv~~pTGs 62 (224)
T 1qde_A 44 AIMPIIEGHD--VLAQAQSGT 62 (224)
T ss_dssp HHHHHHTTCC--EEEECCTTS
T ss_pred HHHHHhcCCC--EEEECCCCC
Confidence 3455678877 456679986
No 49
>1nvp_B Transcription initiation factor IIA alpha chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: a.32.1.1
Probab=25.35 E-value=69 Score=15.70 Aligned_cols=18 Identities=17% Similarity=0.486 Sum_probs=13.6
Q ss_pred CChHHHHHHhHHHHHHHh
Q psy7619 69 ATQTEIYENSVRPMVNHM 86 (102)
Q Consensus 69 ~sq~~vy~~~~~~~v~~~ 86 (102)
.....+|+.++.++|..+
T Consensus 7 ~~v~~vY~~VIedVI~~v 24 (57)
T 1nvp_B 7 NTVPKLYRSVIEDVINDV 24 (57)
T ss_dssp -CHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHH
Confidence 456789999988888764
No 50
>3bor_A Human initiation factor 4A-II; translation initiation, DEAD BOX, structural genomics, helic binding, HOST-virus interaction, hydrolase; 1.85A {Homo sapiens} PDB: 2g9n_A*
Probab=24.50 E-value=42 Score=20.59 Aligned_cols=19 Identities=32% Similarity=0.635 Sum_probs=13.1
Q ss_pred HHHHhhCcccEEEEEeccCCC
Q psy7619 82 MVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 82 ~v~~~l~G~n~~i~aYGqTgS 102 (102)
.+..+++|.| ++..++|||
T Consensus 60 ai~~i~~~~~--~li~apTGs 78 (237)
T 3bor_A 60 AIIPCIKGYD--VIAQAQSGT 78 (237)
T ss_dssp HHHHHHTTCC--EEECCCSSH
T ss_pred HHHHHhCCCC--EEEECCCCC
Confidence 3455678877 456789986
No 51
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=24.37 E-value=82 Score=20.54 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=23.8
Q ss_pred eecceeeCCCCChHHHHHHhHHHHHHHhhCcccE--EEEEeccCCC
Q psy7619 59 FTFDAVYGMQATQTEIYENSVRPMVNHMLHGYNV--TIFAYGQTGT 102 (102)
Q Consensus 59 f~FD~Vf~~~~sq~~vy~~~~~~~v~~~l~G~n~--~i~aYGqTgS 102 (102)
+.||.+.+ |+.+-+.. ..++..+..|... .++-||.+|+
T Consensus 41 ~~~~~ivG----~~~~~~~l-~~l~~~~~~~~~~~~~vLl~GppGt 81 (368)
T 3uk6_A 41 QASQGMVG----QLAARRAA-GVVLEMIREGKIAGRAVLIAGQPGT 81 (368)
T ss_dssp SEETTEES----CHHHHHHH-HHHHHHHHTTCCTTCEEEEEESTTS
T ss_pred cchhhccC----hHHHHHHH-HHHHHHHHcCCCCCCEEEEECCCCC
Confidence 44666554 55555443 4455555566543 6788999985
No 52
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=23.83 E-value=37 Score=21.97 Aligned_cols=39 Identities=18% Similarity=0.324 Sum_probs=22.6
Q ss_pred ceeeecceeeCCCCChHHHHHHhHHHHHHHhhCcccEEEEEeccCCC
Q psy7619 56 ARRFTFDAVYGMQATQTEIYENSVRPMVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 56 ~~~f~FD~Vf~~~~sq~~vy~~~~~~~v~~~l~G~n~~i~aYGqTgS 102 (102)
...+.|+.+.+. +.+-+. +...++.+....|+-||.+|+
T Consensus 18 ~~~~~f~~i~G~----~~~~~~----l~~~~~~~~~~~vLl~G~~Gt 56 (350)
T 1g8p_A 18 RPVFPFSAIVGQ----EDMKLA----LLLTAVDPGIGGVLVFGDRGT 56 (350)
T ss_dssp CCCCCGGGSCSC----HHHHHH----HHHHHHCGGGCCEEEECCGGG
T ss_pred CCCCCchhccCh----HHHHHH----HHHHhhCCCCceEEEECCCCc
Confidence 345788887763 343332 223334334445888999985
No 53
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=22.83 E-value=57 Score=20.97 Aligned_cols=44 Identities=18% Similarity=0.335 Sum_probs=24.0
Q ss_pred eecceeeCCCCChHHHHHHhHHHHHHH-hhC----cccEEEEEeccCCC
Q psy7619 59 FTFDAVYGMQATQTEIYENSVRPMVNH-MLH----GYNVTIFAYGQTGT 102 (102)
Q Consensus 59 f~FD~Vf~~~~sq~~vy~~~~~~~v~~-~l~----G~n~~i~aYGqTgS 102 (102)
.+||.+.+.+..-+.+.+.+..|+... .+. .....|+-||.+|+
T Consensus 12 ~~~~di~G~~~~~~~l~~~v~~~~~~~~~~~~~~~~~~~~vLL~Gp~Gt 60 (301)
T 3cf0_A 12 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGC 60 (301)
T ss_dssp CCGGGSCSCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCSEEEEECSSSS
T ss_pred CCHHHhCCHHHHHHHHHHHHHHHhhCHHHHHHcCCCCCceEEEECCCCc
Confidence 567777765554555555544443211 111 22345778999986
No 54
>1egw_A MADS box transcription enhancer factor 2, polypeptide A; MADS-box transcription factor, DNA/protein complex, transcription/DNA; HET: DNA; 1.50A {Homo sapiens} SCOP: d.88.1.1 PDB: 1c7u_A 3mu6_A*
Probab=22.82 E-value=69 Score=16.68 Aligned_cols=17 Identities=6% Similarity=0.372 Sum_probs=14.9
Q ss_pred HhhCcccEEEEEeccCC
Q psy7619 85 HMLHGYNVTIFAYGQTG 101 (102)
Q Consensus 85 ~~l~G~n~~i~aYGqTg 101 (102)
.+|.|-..+++.|+.+|
T Consensus 35 svLCdaeV~livfs~~g 51 (77)
T 1egw_A 35 SVLCDCEIALIIFNSSN 51 (77)
T ss_dssp HHHTTCEEEEEEECTTC
T ss_pred hcccCCeEEEEEECCCC
Confidence 47899999999999887
No 55
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=22.79 E-value=44 Score=21.20 Aligned_cols=45 Identities=16% Similarity=0.412 Sum_probs=24.9
Q ss_pred eeecceeeCCCCChHHHHHHhHHHHHH-HhhCc---ccEEEEEeccCCC
Q psy7619 58 RFTFDAVYGMQATQTEIYENSVRPMVN-HMLHG---YNVTIFAYGQTGT 102 (102)
Q Consensus 58 ~f~FD~Vf~~~~sq~~vy~~~~~~~v~-~~l~G---~n~~i~aYGqTgS 102 (102)
...|+.+.+.+..-+.+.+.+..++.. .++.| -...++-||.+|+
T Consensus 17 ~~~~~~i~G~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~vll~Gp~Gt 65 (297)
T 3b9p_A 17 KVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGN 65 (297)
T ss_dssp CCCGGGSCCCHHHHHHHHHHTHHHHHCGGGSCGGGCCCSEEEEESSSSS
T ss_pred CCCHHHhCChHHHHHHHHHHHHhhhhCHHHHhcCCCCCCeEEEECcCCC
Confidence 356787776544444444444444331 12222 2346788999986
No 56
>3dfe_A Putative PII-like signaling protein; YP_323533.1, structur genomics, joint center for structural genomics, JCSG; 2.35A {Anabaena variabilis atcc 29413} SCOP: d.58.5.0
Probab=22.57 E-value=1.1e+02 Score=16.97 Aligned_cols=27 Identities=15% Similarity=0.260 Sum_probs=22.3
Q ss_pred hHHHHHHhHHHHHHHhhCcccEEEEEe
Q psy7619 71 QTEIYENSVRPMVNHMLHGYNVTIFAY 97 (102)
Q Consensus 71 q~~vy~~~~~~~v~~~l~G~n~~i~aY 97 (102)
.++.-+.++..++..++.|+.+-+|.+
T Consensus 69 ~de~vd~vv~~I~~~~~t~~~G~ifVs 95 (111)
T 3dfe_A 69 NREMAEKIADQVAIKFFTDYAGIIYIC 95 (111)
T ss_dssp SHHHHHHHHHHHHHHHTTTSCEEEEEE
T ss_pred CHHHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 467778888888889999999988864
No 57
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=21.80 E-value=31 Score=22.95 Aligned_cols=44 Identities=27% Similarity=0.505 Sum_probs=22.1
Q ss_pred eecceeeCCCCChHHHHHHhHHHHHHH-h---hCcccEEEEEeccCCC
Q psy7619 59 FTFDAVYGMQATQTEIYENSVRPMVNH-M---LHGYNVTIFAYGQTGT 102 (102)
Q Consensus 59 f~FD~Vf~~~~sq~~vy~~~~~~~v~~-~---l~G~n~~i~aYGqTgS 102 (102)
..||.+.+.+..-+.+.+.+..++... + +......|+-||.+|+
T Consensus 81 ~~~~~i~G~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~vLl~GppGt 128 (357)
T 3d8b_A 81 VNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLRGPPKGILLFGPPGT 128 (357)
T ss_dssp CCGGGSCSCHHHHHHHHHHTHHHHHCTTTSCGGGSCCSEEEEESSTTS
T ss_pred CCHHHhCChHHHHHHHHHHHHHHhhChHhHhhccCCCceEEEECCCCC
Confidence 456666654333333443333332211 1 1233456788999986
No 58
>1jy4_A B4dimer; eight-stranded beta-sheet, disulfide bond, de novo protein design; HET: DPR; NMR {Synthetic} SCOP: k.35.1.1 PDB: 1jy6_A*
Probab=21.62 E-value=28 Score=14.82 Aligned_cols=6 Identities=50% Similarity=1.060 Sum_probs=2.4
Q ss_pred cccEEE
Q psy7619 89 GYNVTI 94 (102)
Q Consensus 89 G~n~~i 94 (102)
||.|-|
T Consensus 28 gykcei 33 (35)
T 1jy4_A 28 GYKCEI 33 (35)
T ss_dssp TEEEEE
T ss_pred CceeEe
Confidence 444333
No 59
>2gxq_A Heat resistant RNA dependent ATPase; RNA helicase, atomic resolution, AMP complex, ribosome biogenesis, thermophilic, hydrolase; HET: AMP; 1.20A {Thermus thermophilus HB27} PDB: 2gxs_A* 2gxu_A 3mwj_A 3mwk_A* 3mwl_A* 3nbf_A* 3nej_A
Probab=21.33 E-value=86 Score=18.36 Aligned_cols=18 Identities=28% Similarity=0.457 Sum_probs=11.8
Q ss_pred HHHhhCcccEEEEEeccCCC
Q psy7619 83 VNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 83 v~~~l~G~n~~i~aYGqTgS 102 (102)
+..+++|.+. +..++|||
T Consensus 32 i~~~~~~~~~--li~~~TGs 49 (207)
T 2gxq_A 32 LPLALEGKDL--IGQARTGT 49 (207)
T ss_dssp HHHHHTTCCE--EEECCTTS
T ss_pred HHHHcCCCCE--EEECCCCC
Confidence 3456778764 45578886
No 60
>1i96_V Translation initiation factor IF3; 30S ribosome; HET: WO2; 4.20A {Thermus thermophilus} SCOP: d.68.1.1
Probab=20.99 E-value=62 Score=17.41 Aligned_cols=13 Identities=23% Similarity=0.309 Sum_probs=10.6
Q ss_pred CCCceEEEEEeCC
Q psy7619 4 YDENIKVVVRCRP 16 (102)
Q Consensus 4 ~~~~i~V~vRvRP 16 (102)
+...|+|.||.|-
T Consensus 29 ~GdKVKvti~fRG 41 (89)
T 1i96_V 29 EGHKVKVTIMFRG 41 (89)
T ss_pred CCCEEEEEEEECC
Confidence 4678999999885
No 61
>3fmo_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 2.51A {Homo sapiens}
Probab=20.65 E-value=72 Score=20.57 Aligned_cols=21 Identities=29% Similarity=0.290 Sum_probs=14.1
Q ss_pred HHHHhhCcccEEEEEeccCCC
Q psy7619 82 MVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 82 ~v~~~l~G~n~~i~aYGqTgS 102 (102)
.+..++.|-.-.+++.++|||
T Consensus 122 ai~~il~~~~~~~l~~a~TGs 142 (300)
T 3fmo_B 122 ALPLMLAEPPQNLIAQSQSGT 142 (300)
T ss_dssp HHHHHTSSSCCCEEEECCTTS
T ss_pred HHHHHHcCCCCeEEEECCCCC
Confidence 456678873334667789997
No 62
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=20.64 E-value=1.7e+02 Score=20.38 Aligned_cols=44 Identities=30% Similarity=0.523 Sum_probs=27.6
Q ss_pred eecceeeCCCCChHHHHHHhHHHHHH-HhhC--cc--cEEEEEeccCCC
Q psy7619 59 FTFDAVYGMQATQTEIYENSVRPMVN-HMLH--GY--NVTIFAYGQTGT 102 (102)
Q Consensus 59 f~FD~Vf~~~~sq~~vy~~~~~~~v~-~~l~--G~--n~~i~aYGqTgS 102 (102)
-+||.|-+-+.--+++-+.+..|+.. ..+. |. .-.|+-||+.|+
T Consensus 169 v~~~digGl~~~k~~l~e~v~~pl~~p~~~~~~g~~~prGiLL~GPPGt 217 (428)
T 4b4t_K 169 VTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGT 217 (428)
T ss_dssp CCGGGSCSCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCEEEEESCTTT
T ss_pred CCHHHhccHHHHHHHHHHHHHHHHhCHHHHHhCCCCCCceEEEECCCCC
Confidence 56788777666666666666666653 2332 22 234788999885
No 63
>3p57_A Myocyte-specific enhancer factor 2A; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3kov_A* 1tqe_P 1n6j_A
Probab=20.53 E-value=57 Score=17.63 Aligned_cols=18 Identities=6% Similarity=0.353 Sum_probs=14.9
Q ss_pred HhhCcccEEEEEeccCCC
Q psy7619 85 HMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 85 ~~l~G~n~~i~aYGqTgS 102 (102)
.+|.|...+++.|+.+|.
T Consensus 35 svLCda~Valiifs~~gk 52 (90)
T 3p57_A 35 SVLCDCEIALIIFNSSNK 52 (90)
T ss_dssp HHHHTCEEEEEEECTTCC
T ss_pred HhccCCceEEEEECCCCC
Confidence 467899999999998873
No 64
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=20.47 E-value=40 Score=22.01 Aligned_cols=40 Identities=20% Similarity=0.208 Sum_probs=22.2
Q ss_pred ceeeCCCCChHHHHHHhHHHHHHHhh-CcccEEEEEeccCCC
Q psy7619 62 DAVYGMQATQTEIYENSVRPMVNHML-HGYNVTIFAYGQTGT 102 (102)
Q Consensus 62 D~Vf~~~~sq~~vy~~~~~~~v~~~l-~G~n~~i~aYGqTgS 102 (102)
+..++.-..+++..+.+.. .+..++ .+....++-||.+|+
T Consensus 15 ~~~p~~~~gr~~~~~~l~~-~l~~~~~~~~~~~vll~G~~G~ 55 (387)
T 2v1u_A 15 DYVPDVLPHREAELRRLAE-VLAPALRGEKPSNALLYGLTGT 55 (387)
T ss_dssp TCCCSCCTTCHHHHHHHHH-TTGGGTSSCCCCCEEECBCTTS
T ss_pred ccCCCCCCCHHHHHHHHHH-HHHHHHcCCCCCcEEEECCCCC
Confidence 3333344456666666532 333333 344557888999986
No 65
>1vec_A ATP-dependent RNA helicase P54; DEAD-box protein, RNA binding protein; HET: TLA; 2.01A {Homo sapiens} SCOP: c.37.1.19
Probab=20.31 E-value=94 Score=18.22 Aligned_cols=18 Identities=28% Similarity=0.508 Sum_probs=11.6
Q ss_pred HHHhhCcccEEEEEeccCCC
Q psy7619 83 VNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 83 v~~~l~G~n~~i~aYGqTgS 102 (102)
++.+++|.|. +..++|||
T Consensus 34 i~~~~~~~~~--lv~apTGs 51 (206)
T 1vec_A 34 IPIALSGRDI--LARAKNGT 51 (206)
T ss_dssp HHHHHTTCCE--EEECCSSS
T ss_pred HHHHccCCCE--EEECCCCC
Confidence 4455678764 45678886
No 66
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=20.27 E-value=49 Score=20.78 Aligned_cols=45 Identities=22% Similarity=0.376 Sum_probs=24.1
Q ss_pred eeecceeeCCCCChHHHHHHhHHHHHHH-hh----CcccEEEEEeccCCC
Q psy7619 58 RFTFDAVYGMQATQTEIYENSVRPMVNH-ML----HGYNVTIFAYGQTGT 102 (102)
Q Consensus 58 ~f~FD~Vf~~~~sq~~vy~~~~~~~v~~-~l----~G~n~~i~aYGqTgS 102 (102)
.+.|+.+.+.+..-+.+.+.+..++... .+ -.....++-||.+|+
T Consensus 13 ~~~~~~i~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll~G~~Gt 62 (285)
T 3h4m_A 13 NVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGT 62 (285)
T ss_dssp CCCGGGSCSCHHHHHHHHHHTHHHHHCHHHHHHHCCCCCSEEEEESSSSS
T ss_pred CCCHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhcCCCCCCeEEEECCCCC
Confidence 4778887765554455544443332211 11 122345777899986
No 67
>3dkp_A Probable ATP-dependent RNA helicase DDX52; DEAD, ADP, structural genomics, structural GEN consortium, SGC, rRNA, ATP-binding, hydrolase; HET: ADP; 2.10A {Homo sapiens}
Probab=20.21 E-value=91 Score=18.99 Aligned_cols=19 Identities=37% Similarity=0.627 Sum_probs=13.0
Q ss_pred HHHHhhCcccEEEEEeccCCC
Q psy7619 82 MVNHMLHGYNVTIFAYGQTGT 102 (102)
Q Consensus 82 ~v~~~l~G~n~~i~aYGqTgS 102 (102)
.+..+++|.+ ++.-++|||
T Consensus 59 ~i~~~~~~~~--~l~~a~TGs 77 (245)
T 3dkp_A 59 AIPVMLHGRE--LLASAPTGS 77 (245)
T ss_dssp HHHHHHTTCC--EEEECCTTS
T ss_pred HHHHHhCCCC--EEEECCCCC
Confidence 3455678877 455678986
No 68
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=20.16 E-value=1.1e+02 Score=16.70 Aligned_cols=23 Identities=22% Similarity=0.468 Sum_probs=17.4
Q ss_pred HhHHHHHHHhhCcccEEEEE-ecc
Q psy7619 77 NSVRPMVNHMLHGYNVTIFA-YGQ 99 (102)
Q Consensus 77 ~~~~~~v~~~l~G~n~~i~a-YGq 99 (102)
+.+..+++.+.+|.+.++++ .|-
T Consensus 67 ~~~~~i~~~~~~G~~V~~l~d~Gd 90 (117)
T 3hh1_A 67 RAVRQVIELLEEGSDVALVTDAGT 90 (117)
T ss_dssp HHHHHHHHHHHTTCCEEEEEETTS
T ss_pred HHHHHHHHHHHCCCeEEEEecCCc
Confidence 33456778888999999998 564
Done!