BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7620
(189 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q963B7|RL9_SPOFR 60S ribosomal protein L9 OS=Spodoptera frugiperda GN=RpL9 PE=2 SV=1
Length = 190
Score = 316 bits (810), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 152/188 (80%), Positives = 168/188 (89%), Gaps = 1/188 (0%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
M+QIV+NQ VKIP GL VK+R VTVKGPRG LKR+FKHLA+DI MVN RVLKVEKWFG
Sbjct: 1 MKQIVANQKVKIPEGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRVLKVEKWFG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKY 120
+KKE+AAVRTVCSH+ NM+KGVTKGF YKMR+ YAHFPINCVT+E N+++EIRNFLGEKY
Sbjct: 61 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRSVYAHFPINCVTTEGNSVIEIRNFLGEKY 120
Query: 121 IRRVKMAPGVKVSNS-KQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVS 179
IRRVKMAPGV V NS KQKDELIIEGN +E+VS SAALIQQSTTVKNKDIRKFLDGLYVS
Sbjct: 121 IRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVS 180
Query: 180 EKTTVVTD 187
EKTTV D
Sbjct: 181 EKTTVEVD 188
>sp|P50882|RL9_DROME 60S ribosomal protein L9 OS=Drosophila melanogaster GN=RpL9 PE=1
SV=2
Length = 190
Score = 308 bits (788), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/186 (80%), Positives = 165/186 (88%), Gaps = 1/186 (0%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
MR I SNQ VKIP+ ++ VKAR VT+ G RGTLKR FKHLA+D++M +KR LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKY 120
TKKE+AAVRTVCSHI NM+KGVT GF YKMRA YAHFPINCVTSENNT++EIRNFLGEKY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 121 IRRVKMAPGVKVSNS-KQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVS 179
IRRV+MAPGV V NS QKDELI+EGNDIE+VS SAALIQQSTTVKNKDIRKFLDGLYVS
Sbjct: 121 IRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVS 180
Query: 180 EKTTVV 185
EKTTVV
Sbjct: 181 EKTTVV 186
>sp|P32969|RL9_HUMAN 60S ribosomal protein L9 OS=Homo sapiens GN=RPL9 PE=1 SV=1
Length = 192
Score = 261 bits (666), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 125/187 (66%), Positives = 153/187 (81%), Gaps = 3/187 (1%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M PGV S S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>sp|Q5IFJ7|RL9_MACFA 60S ribosomal protein L9 OS=Macaca fascicularis GN=RPL9 PE=2 SV=1
Length = 192
Score = 260 bits (665), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 124/187 (66%), Positives = 153/187 (81%), Gaps = 3/187 (1%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A +RT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGE
Sbjct: 61 WGNRKELATIRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M PGV S S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>sp|Q3SYR7|RL9_BOVIN 60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1
Length = 192
Score = 260 bits (664), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 125/187 (66%), Positives = 153/187 (81%), Gaps = 3/187 (1%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M PGV S S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>sp|P51410|RL9_MOUSE 60S ribosomal protein L9 OS=Mus musculus GN=Rpl9 PE=2 SV=2
Length = 192
Score = 258 bits (658), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/187 (66%), Positives = 153/187 (81%), Gaps = 3/187 (1%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP ++ +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVEITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M GV S S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>sp|P17077|RL9_RAT 60S ribosomal protein L9 OS=Rattus norvegicus GN=Rpl9 PE=1 SV=1
Length = 192
Score = 256 bits (655), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 124/187 (66%), Positives = 152/187 (81%), Gaps = 3/187 (1%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M GV S S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>sp|Q5R9Q7|RL9_PONAB 60S ribosomal protein L9 OS=Pongo abelii GN=RPL9 PE=2 SV=1
Length = 192
Score = 256 bits (655), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 123/187 (65%), Positives = 152/187 (81%), Gaps = 3/187 (1%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V++W
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDEW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M PGV S S+ QKDELI+ GNDIE VS SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRPGVACSVSQAQKDELILGGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>sp|Q90YW0|RL9_ICTPU 60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1
Length = 192
Score = 252 bits (644), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 120/192 (62%), Positives = 153/192 (79%), Gaps = 3/192 (1%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+S QTV IP + +K RTV+VKGPRG L+R+F H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSTQTVDIPDNVDVTLKGRTVSVKGPRGVLRREFNHINLELRLLGKKQKKLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V E +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVS-NSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M PGV + ++ QKDEL++EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTVVTDAS 189
VSEK TVV S
Sbjct: 181 VSEKGTVVEPES 192
>sp|Q95Y90|RL9_CAEEL 60S ribosomal protein L9 OS=Caenorhabditis elegans GN=rpl-9 PE=1
SV=1
Length = 189
Score = 233 bits (595), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 110/186 (59%), Positives = 142/186 (76%), Gaps = 1/186 (0%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
M+ I SN TV P G+ VK R V V GPRGT+++DF+HL +++ + K L+V KWFG
Sbjct: 1 MKLIESNDTVVFPEGVTFTVKNRIVHVTGPRGTIRKDFRHLHMEMERIGKSTLRVRKWFG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKY 120
+KE+AA+RTVCSHI NM+KGVT GF YKMR+ YAHFPIN + N +EIRNFLGEK
Sbjct: 61 VRKELAAIRTVCSHIKNMIKGVTVGFRYKMRSVYAHFPINVTLQDGNRTVEIRNFLGEKI 120
Query: 121 IRRVKMAPGVKVS-NSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVS 179
+RRV + GV + ++ QKDE+++EGND++ VS++AA IQQST VK KDIRKFLDG+YVS
Sbjct: 121 VRRVPLPEGVIATISTAQKDEIVVEGNDVQFVSQAAARIQQSTAVKEKDIRKFLDGIYVS 180
Query: 180 EKTTVV 185
EKTT+V
Sbjct: 181 EKTTIV 186
>sp|P49210|RL9_ORYSJ 60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9
PE=2 SV=3
Length = 190
Score = 223 bits (568), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 107/190 (56%), Positives = 143/190 (75%), Gaps = 2/190 (1%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMV-NKRVLKVEKWF 59
M+ I++++T++IP G+ V A+ VTV+GPRG L R+FKHL +D ++ R L+V+ WF
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWF 60
Query: 60 GTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEK 119
GT++ +AA+RT SH+ N++ GVTKG+ YKMR YAHFPIN + +NT +EIRNFLGEK
Sbjct: 61 GTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEK 120
Query: 120 YIRRVKMAPGVKVSNS-KQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYV 178
+R+V M GV + S K KDEL+++GNDIE VSRSAALI Q VKNKDIRKFLDG+YV
Sbjct: 121 KVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYV 180
Query: 179 SEKTTVVTDA 188
S+K T+ DA
Sbjct: 181 SDKGTITEDA 190
>sp|Q9SZX9|RL92_ARATH 60S ribosomal protein L9-2 OS=Arabidopsis thaliana GN=RPL9D PE=2
SV=1
Length = 194
Score = 217 bits (552), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 139/193 (72%), Gaps = 6/193 (3%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMV-----NKRVLKV 55
M+ I+S++T+ IP G+ V A+ + V+GPRG L RDFKHL +D ++ KR LK+
Sbjct: 1 MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60
Query: 56 EKWFGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNF 115
+ WFG++K A++RT SH+ N++ GVT+GFLY+MR YAHFPIN NN +EIRNF
Sbjct: 61 DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120
Query: 116 LGEKYIRRVKMAPGVKVSNSKQ-KDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLD 174
LGEK +R+V+M GVK+ S++ KDE+I+EGNDIE VSRS ALI Q VK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180
Query: 175 GLYVSEKTTVVTD 187
G+YVSEK + +
Sbjct: 181 GIYVSEKGKIAVE 193
>sp|P30707|RL9_PEA 60S ribosomal protein L9 OS=Pisum sativum GN=RPL9 PE=2 SV=1
Length = 193
Score = 207 bits (526), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 137/192 (71%), Gaps = 5/192 (2%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMV----NKRVLKVE 56
M+ I+S++T+ IP G+ V A+ + V+GPRG L RDFKHL +D ++ K+ LK++
Sbjct: 1 MKTILSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITDENGKKKLKID 60
Query: 57 KWFGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFL 116
WFG++K AA+RT SH+ N++ GVTKGF YKMR YA FPIN + +N +EIRNFL
Sbjct: 61 AWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNFL 120
Query: 117 GEKYIRRVKMAPGVKVSNSKQ-KDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDG 175
GEK +R+V + GV + S++ KDE++++GNDIE VSRS ALI Q VK KDIRKFLDG
Sbjct: 121 GEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLDG 180
Query: 176 LYVSEKTTVVTD 187
+YVSEK VV +
Sbjct: 181 IYVSEKGAVVVE 192
>sp|P49209|RL91_ARATH 60S ribosomal protein L9-1 OS=Arabidopsis thaliana GN=RPL9B PE=2
SV=3
Length = 194
Score = 206 bits (523), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 137/193 (70%), Gaps = 6/193 (3%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMV-----NKRVLKV 55
M+ I+S++T+ IP + V A+ + V+GPRG L RDFKHL +D ++ K+ LK+
Sbjct: 1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60
Query: 56 EKWFGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNF 115
+ WFGT+K A++RT SH+ N++ GVT+GF YKMR YAHFPIN + +EIRNF
Sbjct: 61 DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120
Query: 116 LGEKYIRRVKMAPGVKVSNSKQ-KDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLD 174
LGEK +R+V+M GV + S++ KDE++++GNDIE VSRS ALI Q VK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180
Query: 175 GLYVSEKTTVVTD 187
G+YVSEK+ +V +
Sbjct: 181 GIYVSEKSKIVEE 193
>sp|Q10232|RL9A_SCHPO 60S ribosomal protein L9-A OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl9a PE=3 SV=1
Length = 190
Score = 194 bits (493), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 134/185 (72%), Gaps = 4/185 (2%)
Query: 2 RQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNK-RVLKVEKWFG 60
R I ++T+ IP+G+ +KAR VTV GPRGTLK++ +H +DI M + +K W G
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRH--VDIEMKKQGNTIKFIVWHG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKY 120
++K A +R+V S I+NM+ GVT+GF YKMR YAHFPIN +EN T++EIRNFLGE+
Sbjct: 61 SRKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERI 120
Query: 121 IRRVKMAPGVKVS-NSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVS 179
R +K PGV VS +S KDE+I+EGN +ENVS+SAA I+Q V+NKDIRKFLDG+YVS
Sbjct: 121 TRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVS 180
Query: 180 EKTTV 184
E+ +
Sbjct: 181 ERGNI 185
>sp|Q54XI5|RL9_DICDI 60S ribosomal protein L9 OS=Dictyostelium discoideum GN=rpl9 PE=1
SV=2
Length = 188
Score = 192 bits (487), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 130/185 (70%), Gaps = 1/185 (0%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
M+ I S++ V+IP + VK R+V V GPRGTL + F H ++DI++V K+ L V+ WFG
Sbjct: 1 MKVINSSRKVQIPENVTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKY 120
+K+IA ++T+ S I NM+ GVTKG+ YKMR YAHFPIN ++ ++EIRNF GEK
Sbjct: 61 NRKQIACIKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKI 120
Query: 121 IRRVKMAPGVKV-SNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVS 179
+RR+++ G+ N K KDE+++ GN +E +S+S A IQ + +K KD+RKFLDG+YVS
Sbjct: 121 VRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVS 180
Query: 180 EKTTV 184
E+ +
Sbjct: 181 ERNVL 185
>sp|O74905|RL9B_SCHPO 60S ribosomal protein L9-B OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rpl9b PE=3 SV=1
Length = 189
Score = 190 bits (483), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/184 (53%), Positives = 130/184 (70%), Gaps = 2/184 (1%)
Query: 2 RQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGT 61
R I ++T+ IP G+ +KAR VTVKGPRG LK++ + + I++ +K W G+
Sbjct: 3 RDIYKDETLTIPEGVSVDIKARLVTVKGPRGVLKQNLRRVDIELKK-QGNTIKFIVWHGS 61
Query: 62 KKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYI 121
+K A +RT S I+NM+ GVT+GF YKMR YAHFPIN +EN T++EIRNFLGE+
Sbjct: 62 RKHNACIRTAYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERIT 121
Query: 122 RRVKMAPGVKVS-NSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSE 180
R +K PGV VS +S KDE+IIEGN +ENVS+SAA I+Q V+NKDIRKFLDG+YVSE
Sbjct: 122 RVIKCLPGVTVSISSAVKDEIIIEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSE 181
Query: 181 KTTV 184
+ +
Sbjct: 182 RGNI 185
>sp|P51401|RL9B_YEAST 60S ribosomal protein L9-B OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL9B PE=1 SV=1
Length = 191
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 128/190 (67%), Gaps = 3/190 (1%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
M+ I + Q ++IP G+ +K+R V V GPRGTL ++ KH+ + VN +++KV G
Sbjct: 1 MKYIQTEQQIEIPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINC--VTSENNTLLEIRNFLGE 118
+K +AA+RTV S + NM+ GVTKG+ YKMR YAHFPIN V + +E+RNFLG+
Sbjct: 61 DRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD 120
Query: 119 KYIRRVKMAPGVKVSNSKQ-KDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
K IR V + GV + S KDE+++ GN +E+VS++AA +QQ V+NKDIRKFLDG+Y
Sbjct: 121 KKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIY 180
Query: 178 VSEKTTVVTD 187
VS K +V D
Sbjct: 181 VSHKGFIVED 190
>sp|P05738|RL9A_YEAST 60S ribosomal protein L9-A OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL9A PE=1 SV=2
Length = 191
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/190 (46%), Positives = 127/190 (66%), Gaps = 3/190 (1%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
M+ I + Q +++P G+ +K+R V V GPRGTL ++ KH+ + VN +++KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINC--VTSENNTLLEIRNFLGE 118
+K +AA+RTV S + NM+ GVTKG+ YKMR YAHFPIN V + +E+RNFLG+
Sbjct: 61 GRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD 120
Query: 119 KYIRRVKMAPGVKVSNSKQ-KDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
K IR V + GV + S KDE+++ GN +E+VS++AA +QQ V+NKDIRKFLDG+Y
Sbjct: 121 KKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIY 180
Query: 178 VSEKTTVVTD 187
VS K + D
Sbjct: 181 VSHKGFITED 190
>sp|Q22AX5|RL9_TETTS 60S ribosomal protein L9 OS=Tetrahymena thermophila (strain SB210)
GN=RPL9 PE=1 SV=1
Length = 188
Score = 171 bits (434), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 127/182 (69%), Gaps = 1/182 (0%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
MR +++ V IP + K R V VKGP GT+KR F++ ++DI +K++ W
Sbjct: 1 MRHLLTEVNVPIPDKVTITAKQRVVEVKGPLGTIKRAFRYASVDIQKPTADNVKLQIWQA 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKY 120
++KE A ++++ S I NM++GVT+G+ +KM+ A+AHFPI +++ + +EI++FLGEK
Sbjct: 61 SRKERAVLQSIASQIKNMIRGVTEGYKFKMKLAFAHFPIQEAVAKDGSSIEIKHFLGEKR 120
Query: 121 IRRVKMAPGVKVS-NSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVS 179
IRR++ PGVK+S ++K+ L ++G D+ NVS++ ALI QS VK KDIR+FLDG+YVS
Sbjct: 121 IRRIQALPGVKISRKDEEKNTLTLQGIDLNNVSQTCALIHQSCLVKEKDIRQFLDGIYVS 180
Query: 180 EK 181
+K
Sbjct: 181 DK 182
>sp|O02376|RL9_HAECO 60S ribosomal protein L9 (Fragment) OS=Haemonchus contortus PE=2
SV=1
Length = 141
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 91/126 (72%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
M+ + SN TV P G+ VK R V V GPRGTLKRDF+HL +++ V K L+V KWFG
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKY 120
+KEIAA+RTVCSHI NM+KGVTKGF YKMR+ YAHFPIN + +EIRNFLGEK
Sbjct: 61 VRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKI 120
Query: 121 IRRVKM 126
+R V +
Sbjct: 121 VRPVPL 126
>sp|A2BMD5|RL6_HYPBU 50S ribosomal protein L6P OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rpl6p PE=3 SV=1
Length = 186
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 115/179 (64%), Gaps = 10/179 (5%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKH-----LAIDIHMVNKRVLKVEKWFGTK 62
+ V++P G++ + VTVKGP+G L RDF H + +D K+V+ VE +F +
Sbjct: 9 EEVRVPEGVEVSIDGLKVTVKGPKGELTRDFSHARNIVIRLDEDEEGKKVV-VEAYFANR 67
Query: 63 KEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIR 122
+ A V T+ +HI NM+ GVTKGF YK++ Y+HFP+ + ++E NFLGEK R
Sbjct: 68 RVKALVGTIAAHIENMITGVTKGFRYKLKIVYSHFPVTVKVQGDKVVIE--NFLGEKAPR 125
Query: 123 RVKMAPGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEK 181
K+ PGV V QKD++I+EG DIE V ++AA I+Q+T VK+KD R F+DG+Y+ EK
Sbjct: 126 IAKIMPGVTVKV--QKDDVIVEGIDIEAVGQTAANIEQATKVKDKDRRVFIDGIYIYEK 182
>sp|Q9V1V1|RL6_PYRAB 50S ribosomal protein L6P OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=rpl6p PE=3 SV=1
Length = 184
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 111/175 (63%), Gaps = 5/175 (2%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ ++IP G++ V+ TV VKGP+G ++R+ + I + +V+ + K F +K++A
Sbjct: 9 EEIEIPEGVEVSVQGNTVKVKGPKGEVERELFWPGVKIFVEGGKVV-IYKDFPRRKDVAI 67
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
VRT +HI+NM+KGVT+GF YK++ Y+HFPI + ++E NFLGEK RR K+
Sbjct: 68 VRTFKAHINNMIKGVTEGFTYKLKVVYSHFPITVKVQGDEVIIE--NFLGEKAPRRAKIL 125
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEKT 182
PGV V Q E+I+EG D E V ++AA I+Q+T + D R F DG+Y+ EK
Sbjct: 126 PGVTVKVKGQ--EIIVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEKA 178
>sp|B8D5V4|RL6_DESK1 50S ribosomal protein L6P OS=Desulfurococcus kamchatkensis (strain
1221n / DSM 18924) GN=rpl6p PE=3 SV=1
Length = 184
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 107/174 (61%), Gaps = 2/174 (1%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ V+IP + V VTVKGP+G + RDF H + RV+ VE + +K+ A
Sbjct: 9 EKVEIPENVAVEVDGLRVTVKGPKGIITRDFSHARGVFIRLEDRVVIVETFVADRKQKAL 68
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
V T+ +HI NM+ GV +G+ YK++ ++HFPI E N ++ IRNF+GEK R K+
Sbjct: 69 VGTIAAHIRNMITGVVRGYRYKLKIIFSHFPITVSVDEKNKVVRIRNFMGEKSDRIAKIY 128
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEK 181
VKV S + ++IIEG DIE V +AA I+++T V ++D R F+DG+Y+ EK
Sbjct: 129 GNVKVKVSGE--DIIIEGVDIEEVGLTAASIERATRVTDRDRRVFMDGIYIYEK 180
>sp|Q8U015|RL6_PYRFU 50S ribosomal protein L6P OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=rpl6p PE=1 SV=1
Length = 184
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ V+IP G++ V+ V VKGP+G L+R+F I I + V+ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
RT +HI NM+KGVT+GF YK++ Y+HFPI+ + ++E NFLGEK R+ K+
Sbjct: 68 ARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPISVKVQGDEVIIE--NFLGEKAPRKAKIL 125
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEKT 182
PGV V Q E+I+EG D E V ++AA I+Q+T + D R F DG+Y+ EK
Sbjct: 126 PGVTVKVRGQ--EIIVEGIDKEAVGQTAANIEQATRITKWDRRIFQDGIYIVEKA 178
>sp|Q5JJG4|RL6_PYRKO 50S ribosomal protein L6P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rpl6p PE=3 SV=1
Length = 184
Score = 137 bits (345), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 113/177 (63%), Gaps = 9/177 (5%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ ++IP G++ V+ TV VKGP+G L+R+ K+ + I + +V+ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
VRT +HI+NM+KGVT+GF Y+++ Y+HFP+ + ++E NFLGEK RR K+
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMTVKVQGDEVVIE--NFLGEKNPRRAKIL 125
Query: 128 PG--VKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEKT 182
PG VKV S E+ +EG D E V ++AA I+Q+T + D R F DG+Y+ EK
Sbjct: 126 PGVTVKVKGS----EIEVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEKA 178
>sp|B6YSN0|RL6_THEON 50S ribosomal protein L6P OS=Thermococcus onnurineus (strain NA1)
GN=rpl6p PE=3 SV=1
Length = 184
Score = 136 bits (343), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 112/177 (63%), Gaps = 9/177 (5%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ V+IP G++ ++ V V+GP+G L+R+ K+ + I + +V+ + K F KK+IA
Sbjct: 9 EEVEIPEGVEVTIERNVVKVRGPKGELERELKYPGVQIFTEDGKVV-IYKEFPRKKDIAI 67
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
RT +HI+NM+KGVT+GF YK++ Y+HFP+ + ++E NFLGEK RR K+
Sbjct: 68 ARTFKAHIANMIKGVTEGFTYKLKVVYSHFPMTVKVQGDEVVIE--NFLGEKNPRRAKIL 125
Query: 128 PG--VKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEKT 182
PG VKV S E+I+EG D E V ++AA I+Q+T + D R F DG+Y+ EK
Sbjct: 126 PGVTVKVMGS----EVIVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEKA 178
>sp|Q9YF91|RL6_AERPE 50S ribosomal protein L6P OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rpl6p PE=3
SV=1
Length = 182
Score = 136 bits (343), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 113/178 (63%), Gaps = 6/178 (3%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHL-AIDIHMVNKRVLKVEKWFGTKKEIA 66
+ V++P G+ + V V GP+G ++RDF H + I + + V+ VE +F ++ A
Sbjct: 9 ERVEVPEGVTVSIDGMRVKVSGPKGEVERDFSHARGVLIRLEDNSVV-VESFFAKARQRA 67
Query: 67 AVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKM 126
V + HI NM+KGV GF YK++ Y+HFPIN V E + + I NFLGEK +R ++
Sbjct: 68 LVGAIAGHIRNMIKGVQGGFRYKLKIMYSHFPIN-VKVEGDKFI-ISNFLGEKGLRIARI 125
Query: 127 APGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 184
PGVKV + ++I+EG D+E V+++AA I+ +T VK+KD RKF+DG+Y+ E+ +
Sbjct: 126 MPGVKV--QVKGSDVIVEGIDVEKVAQTAANIELATKVKDKDRRKFMDGIYIYEREVI 181
>sp|C5A269|RL6_THEGJ 50S ribosomal protein L6P OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=rpl6p PE=3 SV=1
Length = 184
Score = 133 bits (334), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 110/175 (62%), Gaps = 5/175 (2%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ V+IP G++ V+ V VKGP+G L+R+ K+ + I + +V+ V K F KK+IA
Sbjct: 9 EEVEIPEGVEVTVENNVVKVKGPKGELERELKYPGVKIFTEDGKVV-VYKEFPRKKDIAI 67
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
RT +HI+NM+KGVT+GF YK++ Y+HFP+ + ++E NFLGEK RR K+
Sbjct: 68 ARTFKAHINNMIKGVTEGFTYKLKVVYSHFPVTVKVQGDEVIIE--NFLGEKNPRRAKIL 125
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEKT 182
PGV V Q E+ +EG D E V ++AA I+Q+T + D R F DG+Y+ EK
Sbjct: 126 PGVTVKVRGQ--EITVEGIDKEKVGQTAANIEQATRITKWDRRVFQDGIYIVEKA 178
>sp|O59433|RL6_PYRHO 50S ribosomal protein L6P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl6p PE=3 SV=2
Length = 184
Score = 131 bits (329), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 109/175 (62%), Gaps = 5/175 (2%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ ++IP G++ V+ V VKGP+G +++ + I + + +V+ + K F +K++A
Sbjct: 9 EEIEIPEGVEVSVQDYNVKVKGPKGEVEKKLFWPGVKIFVEDGKVV-IYKDFPRRKDVAI 67
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
VRT +HI+NM+KGVT+GF YK++ Y+HFPI + ++E NFLGEK RR K+
Sbjct: 68 VRTFKAHINNMIKGVTEGFTYKLKVVYSHFPITVKVQGDEVIIE--NFLGEKAPRRAKIL 125
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEKT 182
PGV V Q E+I+EG D E ++AA I+Q+T + D R F DG+Y+ EK
Sbjct: 126 PGVTVKVKGQ--EIIVEGIDKEATGQTAANIEQATRITKWDRRVFQDGIYIVEKA 178
>sp|A3DNC3|RL6_STAMF 50S ribosomal protein L6P OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rpl6p PE=3 SV=1
Length = 185
Score = 130 bits (328), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 111/174 (63%), Gaps = 3/174 (1%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHL-AIDIHMVNKRVLKVEKWFGTKKEIA 66
+ + IP + + V V GP+G+++RDF H+ I + N +++ VE +F +++ A
Sbjct: 9 EEIDIPENVTVEINGLKVKVNGPKGSIERDFSHVRNIILRKENSKII-VETFFADRRKKA 67
Query: 67 AVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKM 126
V T+ SHI NM+KGV KG+ YK++ Y+HFPI + N ++ I+NFLGEK R K+
Sbjct: 68 LVGTIASHIENMIKGVLKGYRYKLKIIYSHFPITVEVDDRNRIVRIKNFLGEKSDRIAKI 127
Query: 127 APGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSE 180
G V + + +++I+EG DIE+V ++AA I+ +T VK+KD R F DG+Y+ +
Sbjct: 128 I-GEDVKVTVKGEDIIVEGIDIEHVGQTAANIELATKVKDKDRRVFADGIYIYD 180
>sp|Q975J6|RL6_SULTO 50S ribosomal protein L6P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rpl6p PE=3 SV=1
Length = 186
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 119/190 (62%), Gaps = 6/190 (3%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLA-IDIHMVNKRVLKVEKWF 59
M+ + + ++IP+G+ ++ + VKGP+G +++DF H++ I+I + +++ VE F
Sbjct: 1 MKAVHLYEEIEIPQGINVNIEGMKIKVKGPKGEIEKDFSHISGIEIRKEDNKIV-VETTF 59
Query: 60 GTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEK 119
+++ A ++ +HI NM GVTKG+ Y ++ Y HFP+ S N ++I+N +GEK
Sbjct: 60 ADRRKKAQFYSIIAHIENMFTGVTKGYRYYLKIIYTHFPVTVKVSGNE--VQIQNLIGEK 117
Query: 120 YIRRVKMAPGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVS 179
IRR K+ GVKV N K +D +I+EG DIE V ++AA I+ ++ + D R F DG+Y+
Sbjct: 118 NIRRAKIMTGVKV-NVKGED-IIVEGQDIEKVGQTAANIELASKITGYDRRVFADGIYIY 175
Query: 180 EKTTVVTDAS 189
+K + ++ +
Sbjct: 176 KKEVIGSEQT 185
>sp|A8AC04|RL6_IGNH4 50S ribosomal protein L6P OS=Ignicoccus hospitalis (strain KIN4/I /
DSM 18386 / JCM 14125) GN=rpl6p PE=3 SV=1
Length = 186
Score = 126 bits (317), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 101/158 (63%), Gaps = 8/158 (5%)
Query: 25 VTVKGPRGTLKRDFKHL-AIDIHMV---NKRVLKVEKWFGTKKEIAAVRTVCSHISNMLK 80
V V+GP+G L+RDF H I I +V K+ + VE +F +K A V TV +HI NM+
Sbjct: 26 VKVRGPKGELERDFSHAKGIRIRVVEEEGKKQVLVETFFANRKRKALVNTVAAHIKNMIT 85
Query: 81 GVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMAPGVKVSNSKQKDE 140
GVTKG+ YKM+ ++HFPI+ + +EI NF+GEK R K+ PGV V Q +
Sbjct: 86 GVTKGWRYKMKIVFSHFPISVKVVGDR--VEIHNFIGEKAPRVAKVLPGVTVKV--QGRD 141
Query: 141 LIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYV 178
+IIEG DIE V+++AA I+Q+T + D R F+DG+Y+
Sbjct: 142 VIIEGTDIEKVAQTAANIEQATKITEFDRRVFMDGIYI 179
>sp|A6UQ60|RL6_METVS 50S ribosomal protein L6P OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=rpl6p PE=3 SV=1
Length = 182
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 106/174 (60%), Gaps = 5/174 (2%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ ++IP + V V VK LKR+ I+I M N++V+ VE F K + A
Sbjct: 9 EEIEIPGNVSVEVNGSEVVVKSGAKVLKRELAFPGIEIKMENEKVV-VESTFPKKNQTAM 67
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
V T SHI NM+KGV++GF YK+ YAHFP+ VT + NT++ I NFLGEKY R K+
Sbjct: 68 VGTYRSHIQNMIKGVSEGFEYKLVIRYAHFPMK-VTFKGNTVI-IDNFLGEKYPRTAKVM 125
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEK 181
GV V + +E+I+ G + E V ++AA I+Q+T VK +D R F DG+Y+ EK
Sbjct: 126 EGVTVKVN--GEEVIVSGTNKEFVGQTAANIEQATKVKGRDTRIFQDGIYIVEK 177
>sp|P14030|RL6_METVA 50S ribosomal protein L6P OS=Methanococcus vannielii GN=rpl6p PE=3
SV=1
Length = 182
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 106/174 (60%), Gaps = 5/174 (2%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ ++IP + V V VK LKR+ I+I M N++V+ VE F K + A
Sbjct: 9 EEIEIPGNVSVEVNGSEVVVKSGAKVLKRELAFPGIEIKMENEKVV-VESTFPKKNQTAM 67
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
V T SHI NM+KGV++GF YK+ YAHFP+ VT + NT++ I NFLGEKY R K+
Sbjct: 68 VGTYRSHIQNMIKGVSEGFEYKLVIRYAHFPMK-VTFKGNTVI-IDNFLGEKYPRTAKVM 125
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEK 181
GV V + +E+I+ G + E V ++AA I+Q+T VK +D R F DG+Y+ EK
Sbjct: 126 EGVTVKVN--GEEVIVSGTNKEFVGQTAANIEQATKVKGRDTRIFQDGIYIVEK 177
>sp|A9A9P8|RL6_METM6 50S ribosomal protein L6P OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=rpl6p PE=3 SV=1
Length = 182
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 106/174 (60%), Gaps = 5/174 (2%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ ++IP + + TV VK LKRD + I+I + +V+ +E F K + A
Sbjct: 9 EEIEIPANVNVEINGNTVAVKSGAKELKRDLLYPGIEISTEDGKVV-IECTFPRKAQTAI 67
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
V T SHI NM+KGVT GF YK+ YAHFP+ V+++ NT++ I NFLGEKY R K+
Sbjct: 68 VGTYRSHIQNMIKGVTDGFEYKLVIRYAHFPMK-VSAKGNTVM-IDNFLGEKYTRTAKIM 125
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEK 181
GV V S + E+I+ G + E V ++AA I+Q+T VK +D R F DG+Y+ EK
Sbjct: 126 DGVTVKVSGE--EVIVSGANKEFVGQTAANIEQATKVKGRDTRIFQDGIYIVEK 177
>sp|A6VH01|RL6_METM7 50S ribosomal protein L6P OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=rpl6p PE=3 SV=1
Length = 182
Score = 121 bits (303), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 104/174 (59%), Gaps = 5/174 (2%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ ++IP + V TV VK LKRD + I+I + +V+ +E F K + A
Sbjct: 9 EEIEIPENVNVEVNGSTVAVKSGAKELKRDLLYPGIEISTEDGKVV-IECTFPRKAQTAI 67
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
V T SHI NM+ GVT GF YK+ YAHFP+ V+++ NT+ I NFLGEKY R K+
Sbjct: 68 VGTYRSHIQNMITGVTDGFEYKLVIRYAHFPMK-VSAKGNTVT-IDNFLGEKYTRTAKIM 125
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEK 181
GV V S + E+I+ G + E V ++AA I+Q+T VK +D R F DG+Y+ EK
Sbjct: 126 DGVTVKVSGE--EVIVSGANKEFVGQTAANIEQATKVKGRDTRIFQDGIYIVEK 177
>sp|A0B9V4|RL6_METTP 50S ribosomal protein L6P OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=rpl6p PE=3 SV=1
Length = 176
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 100/170 (58%), Gaps = 5/170 (2%)
Query: 12 IPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAAVRTV 71
IP G+ + R+V VKGP+G L R+ + I+I + ++L + K+ +A V T+
Sbjct: 11 IPDGVDVQISGRSVRVKGPKGELSRELWYPDIEIKREDSKIL-IRSVARKKQHLAMVGTI 69
Query: 72 CSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMAPGVK 131
+HI NM++GVT GF Y+MR Y+HFPI ++ + I NFLGE+ R + V
Sbjct: 70 AAHIKNMIRGVTDGFEYRMRVVYSHFPIQVKVADGK--VAISNFLGERKPRFATIVGDVN 127
Query: 132 VSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEK 181
V KDE++I G D E V ++ A I+Q+T V+ D+R F DG+Y+ EK
Sbjct: 128 VEVG--KDEILIRGMDKEAVGQTMANIEQATRVRGFDVRIFQDGIYLVEK 175
>sp|A4FWA5|RL6_METM5 50S ribosomal protein L6P OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=rpl6p PE=3 SV=1
Length = 182
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 104/174 (59%), Gaps = 5/174 (2%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ ++IP + + TV VK L+RD + I+I + +V+ +E F K + A
Sbjct: 9 EEIEIPENVNVEINGNTVAVKSGAKELRRDLMYPGIEISTEDGKVV-IECTFPRKVQTAI 67
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
V T SHI NM+ GVT GF YK+ YAHFP+ V+++ NT+ I NFLGEKY R K+
Sbjct: 68 VGTYRSHIQNMITGVTDGFEYKLVIRYAHFPMK-VSAKGNTVT-IDNFLGEKYTRTAKIM 125
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEK 181
GV V S + E+I+ G + E V ++AA I+Q+T VK +D R F DG+Y+ EK
Sbjct: 126 DGVTVKVSGE--EVIVSGANKEFVGQTAANIEQATKVKGRDTRIFQDGIYIVEK 177
>sp|Q2FSG5|RL6_METHJ 50S ribosomal protein L6P OS=Methanospirillum hungatei (strain JF-1
/ DSM 864) GN=rpl6p PE=3 SV=1
Length = 176
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 102/178 (57%), Gaps = 15/178 (8%)
Query: 10 VKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAAVR 69
V IP G+ + + VKGP+G L+RD + I+I + ++ V F T+ + AV
Sbjct: 7 VSIPSGVSVTMDGTVLHVKGPKGNLQRDMWYPGIEITIGSEDVR-----FTTESQKKAVT 61
Query: 70 ----TVCSHISNMLKGVTKGFLYKMRAAYAHFPINC-VTSENNTLLEIRNFLGEKYIRRV 124
T+ SH SNM GVTKG+LY M+ Y+HFPI V E LEI NFLGEKY R
Sbjct: 62 SMVGTLASHCSNMCTGVTKGYLYSMKVVYSHFPIQIKVVGET---LEIVNFLGEKYPRSA 118
Query: 125 KMAPGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEKT 182
++ PG V DE+ + G D E V +AA I+++T ++++D R F DG+Y+ ++
Sbjct: 119 RILPGTTVKVG--SDEVTVTGIDKEVVGSTAANIERATRIRDRDPRVFQDGIYIVSRS 174
>sp|Q6LXD7|RL6_METMP 50S ribosomal protein L6P OS=Methanococcus maripaludis (strain S2 /
LL) GN=rpl6p PE=3 SV=1
Length = 182
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 105/174 (60%), Gaps = 5/174 (2%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ ++IP + + TV VK LKR+ + I+I + +V+ +E F K + A
Sbjct: 9 EEIEIPENVNVEINGSTVVVKSGAKELKRELMYPGIEISTEDGKVV-IECAFPRKAQTAI 67
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
V T SHI NM+ GVT GF YK+ YAHFP+ V+++ NT++ I NFLGEKY R K+
Sbjct: 68 VGTYRSHIQNMITGVTDGFEYKLVIRYAHFPMK-VSAKGNTVM-IDNFLGEKYTRTAKIM 125
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEK 181
GV V S + ++++ G + E V ++AA I+Q+T VK +D R F DG+Y+ EK
Sbjct: 126 DGVTVKVSGE--DVVVSGANKEFVGQTAANIEQATKVKGRDTRIFQDGIYIVEK 177
>sp|P54042|RL6_METJA 50S ribosomal protein L6P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rpl6p PE=3 SV=1
Length = 182
Score = 117 bits (293), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 104/175 (59%), Gaps = 5/175 (2%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ VKIP +Q + V VK L+R F+H I I ++ + + +K+ A
Sbjct: 9 ERVKIPENVQVEINNNEVVVKSGGKELRRRFEHPKIVIKKEGDEIV-IFCEYPRRKDKAM 67
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
V T+ +HI+NM+KGVT+GF YK++ YAHFP+ N ++E NFLGEK+ RR ++
Sbjct: 68 VGTIRAHINNMIKGVTEGFTYKLKIRYAHFPMKVSVKGNEVIIE--NFLGEKHPRRARIM 125
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEKT 182
GV V S + ++I+ G D E V ++AA I+Q+T +K +D R F DG+Y+ EK
Sbjct: 126 EGVTVKISGE--DVIVTGIDKEKVGQTAANIEQATRIKGRDPRVFQDGIYIVEKA 178
>sp|A5UL72|RL6_METS3 50S ribosomal protein L6P OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rpl6p PE=3 SV=1
Length = 178
Score = 116 bits (291), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 101/174 (58%), Gaps = 5/174 (2%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ ++IP G++ + VTVKGP G R F + +DI V V+ +E F KK+ A
Sbjct: 9 EEIEIPEGVEVIINNNEVTVKGPNGEDSRKFTYPNVDITEVENNVV-LETSFPRKKDKAM 67
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
+ T +HISNM+ GVT GF Y M+ +AHFP+ N ++ I NFLGE++ R K+
Sbjct: 68 IGTTKAHISNMITGVTDGFEYHMKIVFAHFPMTVKV--NKDVVVIDNFLGERHPRTAKVV 125
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEK 181
KV + DE+ I G + E+V ++ A ++Q+T +K +D R F DG+Y+ K
Sbjct: 126 GSAKV--VVKGDEVTITGINKEHVGQTMANLEQATKIKGRDPRVFQDGIYLISK 177
>sp|O26127|RL6_METTH 50S ribosomal protein L6P OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rpl6p PE=3 SV=1
Length = 177
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 105/174 (60%), Gaps = 6/174 (3%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ + IP G+ + VTVKGP+ L R F H I + + + +V+ +E F KK+ A
Sbjct: 9 EEIPIPDGVDVTIDG-GVTVKGPKWELSRKFNHSEISMAVEDDKVV-LEVKFPKKKDKAM 66
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
+ TV +HISNM+ GVT+GF Y+M+ YAHFP++ + + ++E NFLGE++ R +
Sbjct: 67 IGTVRAHISNMITGVTEGFRYRMKIVYAHFPMSVKVAGDKVVIE--NFLGERHPRTARFV 124
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEK 181
KV + DE+ I G + E+V ++ A I+Q+T +K +D R F DG+Y+ K
Sbjct: 125 GDTKV--QVKGDEVEITGINKEHVGQTMANIEQATKIKGRDPRVFQDGIYLVSK 176
>sp|Q2NFX3|RL6_METST 50S ribosomal protein L6P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rpl6p PE=3 SV=1
Length = 184
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 100/174 (57%), Gaps = 4/174 (2%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+ + IP + + VTVKG G +KR+F H I I + V V+ F KK+ A
Sbjct: 9 EIIPIPEDVTVTINGSEVTVKGNGGEIKRNFNHNKITISNDEENVT-VKVAFPNKKDKAM 67
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
V T+ SHISNM+ GV GF YKM+ YAHFP+ ++ I NFLGE+ R+ K+
Sbjct: 68 VGTIRSHISNMIYGVDHGFTYKMKIVYAHFPMTVKVQ--GKIVTIDNFLGERSPRKAKII 125
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEK 181
G V S + +++ I G + E+V ++ A I+Q+T +K +D R F DG+Y+ +K
Sbjct: 126 -GDDVKVSVKGEDVTITGINKEHVGQTMANIEQATKIKGRDPRIFQDGIYLVDK 178
>sp|O05637|RL6_SULAC 50S ribosomal protein L6P OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=rpl6p PE=3 SV=1
Length = 189
Score = 110 bits (274), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 111/183 (60%), Gaps = 6/183 (3%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHL-AIDIHMVNKRVLKVEKWFGTKKEIA 66
+ ++IP ++ ++ + VKGP+G + +DF + I I + +++ +E F +++ A
Sbjct: 11 EEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSYAKGIRIQLNEGKII-LETTFADRRKKA 69
Query: 67 AVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKM 126
+ ++ +HI NM+ G G+ Y ++ HFPI+ S + +++ N +GEK IRR K+
Sbjct: 70 LLYSIIAHIKNMITGTINGYRYYLKVISTHFPISVKVSGDE--VQVSNLIGEKNIRRAKI 127
Query: 127 APGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVT 186
PGVKV + + +++++EG+DI NV+++AA I+ ST + D R F DG+Y+ +K +
Sbjct: 128 LPGVKV--TVKGEDIVVEGSDIYNVAQTAANIESSTKIVGYDRRIFSDGIYIYKKEVIGL 185
Query: 187 DAS 189
+ S
Sbjct: 186 EQS 188
>sp|Q0W1X2|RL6_UNCMA 50S ribosomal protein L6P OS=Uncultured methanogenic archaeon RC-I
GN=rpl6p PE=3 SV=1
Length = 177
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 100/172 (58%), Gaps = 4/172 (2%)
Query: 10 VKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAAVR 69
+++P+G+ V T+T KG +G + R+F+ I + +V+ VE K+ A V
Sbjct: 9 IEVPQGVTVTVSGATLTTKGQKGQISREFRFPGISVRTDGGKVI-VETGKDDKQTKATVG 67
Query: 70 TVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMAPG 129
T SHI NM+ GV++G+ Y M+ YAHFPI V E + I NFLGE+ R +
Sbjct: 68 TYASHIKNMMTGVSEGYEYHMKIVYAHFPIQ-VKVEGKDKVTIGNFLGERKARTANIVGE 126
Query: 130 VKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEK 181
KV + Q D++++ G + E++ ++AA I+Q+ ++ +D R F DG+Y++ K
Sbjct: 127 TKV--TVQGDKVVLTGINKEDLGQTAANIEQACRIRKRDPRVFQDGIYITSK 176
>sp|Q8PV34|RL6_METMA 50S ribosomal protein L6P OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rpl6p PE=3 SV=1
Length = 176
Score = 107 bits (267), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 102/175 (58%), Gaps = 5/175 (2%)
Query: 8 QTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAA 67
+T++IP G+ + T KGP+GT++R F + I I + V+ V+ K++ A
Sbjct: 7 RTIEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAM 65
Query: 68 VRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMA 127
V T SH+ N++ GV++GF KM YAHFP+ V E TL+ I NFLGEK R K+
Sbjct: 66 VGTFASHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL 123
Query: 128 PGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEKT 182
KV S +E+++ G + E+V ++AA I+Q T +K D R F DG+Y+ +K
Sbjct: 124 GETKVKVS--GNEIVVSGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQKA 176
>sp|Q9UX91|RL6_SULSO 50S ribosomal protein L6P OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rpl6p PE=3 SV=1
Length = 181
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 110/185 (59%), Gaps = 6/185 (3%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHL-AIDIHMVNKRVLKVEKWF 59
M+ ++ + ++IP+ + +K + +KGP+G + +DF I I + +++ +E F
Sbjct: 1 MQIVILREEIEIPKNVVVDLKGSIIKIKGPKGEVVKDFSFAKGIQISLDGNKIV-LETTF 59
Query: 60 GTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEK 119
+++ A ++ SHI NM+ GVTKG+ Y ++ Y HFP + N ++I N +GEK
Sbjct: 60 ANRRKKAVFYSIVSHIKNMITGVTKGYRYYLKIIYTHFPTSVKVVGNE--VQITNLIGEK 117
Query: 120 YIRRVKMAPGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVS 179
RR ++ GVKV + + +++++EG ++E V+++AA I+ ++ + D R F DG+++
Sbjct: 118 NTRRAQILEGVKV--TVKGEDIVVEGPNLEAVAQTAANIESASKISGFDRRIFSDGIFIY 175
Query: 180 EKTTV 184
+K +
Sbjct: 176 KKEVI 180
>sp|Q74MR6|RL6_NANEQ 50S ribosomal protein L6P OS=Nanoarchaeum equitans (strain Kin4-M)
GN=rpl6p PE=3 SV=1
Length = 192
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 107/192 (55%), Gaps = 17/192 (8%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
MR + + IP ++ + + V GP+G ++R F H I + + + +++ +E +F
Sbjct: 1 MRIPIIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKLSVNDNKII-LETYFA 59
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEK- 119
T++E + T SHI NML+GV F+Y+++ Y HFP+ V E N L+ + NFLGEK
Sbjct: 60 TRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEKA 117
Query: 120 -------YIRRVKMAPGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTV--KNKDIR 170
Y+ +VK VK+ +K + E+++E D E A++I+QST K KD R
Sbjct: 118 PIIKELPYLDKVK----VKIEQNKDETEIVVESPDKEKAGIVASMIEQSTRFLHKRKDRR 173
Query: 171 KFLDGLYVSEKT 182
+F DG+++ K
Sbjct: 174 RFTDGIWLYYKA 185
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,380,395
Number of Sequences: 539616
Number of extensions: 2266400
Number of successful extensions: 7231
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 486
Number of HSP's that attempted gapping in prelim test: 6395
Number of HSP's gapped (non-prelim): 731
length of query: 189
length of database: 191,569,459
effective HSP length: 111
effective length of query: 78
effective length of database: 131,672,083
effective search space: 10270422474
effective search space used: 10270422474
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)