Your job contains 1 sequence.
>psy7620
MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG
TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKY
IRRVKMAPGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSE
KTTVVTDAS
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7620
(189 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015756 - symbol:RpL9 "Ribosomal protein L9" speci... 759 2.7e-75 1
UNIPROTKB|E2R149 - symbol:RPL9 "Uncharacterized protein" ... 647 2.0e-63 1
UNIPROTKB|P32969 - symbol:RPL9 "60S ribosomal protein L9"... 647 2.0e-63 1
UNIPROTKB|I3LP78 - symbol:RPL9 "Uncharacterized protein" ... 647 2.0e-63 1
UNIPROTKB|Q3SYR7 - symbol:RPL9 "60S ribosomal protein L9"... 646 2.6e-63 1
MGI|MGI:1298373 - symbol:Rpl9 "ribosomal protein L9" spec... 641 8.8e-63 1
RGD|62049 - symbol:Rpl9 "ribosomal protein L9" species:10... 639 1.4e-62 1
UNIPROTKB|G3N2H8 - symbol:G3N2H8 "Uncharacterized protein... 634 4.8e-62 1
UNIPROTKB|G3MYL1 - symbol:Bt.105281 "Uncharacterized prot... 633 6.2e-62 1
UNIPROTKB|G3N0T8 - symbol:G3N0T8 "Uncharacterized protein... 631 1.0e-61 1
UNIPROTKB|D6RAN4 - symbol:RPL9 "60S ribosomal protein L9"... 629 1.6e-61 1
UNIPROTKB|G3MXR3 - symbol:G3MXR3 "Uncharacterized protein... 627 2.7e-61 1
RGD|1561789 - symbol:RGD1561789 "similar to 60S ribosomal... 621 1.2e-60 1
UNIPROTKB|E1BUZ8 - symbol:RPL9 "Uncharacterized protein" ... 619 1.9e-60 1
ZFIN|ZDB-GENE-030131-8646 - symbol:rpl9 "ribosomal protei... 617 3.1e-60 1
UNIPROTKB|F6PWD5 - symbol:F6PWD5 "Uncharacterized protein... 610 1.7e-59 1
UNIPROTKB|F1NS91 - symbol:RPL9 "Uncharacterized protein" ... 609 2.2e-59 1
UNIPROTKB|H0Y9V9 - symbol:RPL9 "60S ribosomal protein L9"... 604 7.3e-59 1
RGD|1561928 - symbol:RGD1561928 "similar to ribosomal pro... 601 1.5e-58 1
RGD|1559566 - symbol:RGD1559566 "similar to 60S ribosomal... 591 1.7e-57 1
WB|WBGene00004420 - symbol:rpl-9 species:6239 "Caenorhabd... 587 4.6e-57 1
UNIPROTKB|J9NVY8 - symbol:J9NVY8 "Uncharacterized protein... 576 6.8e-56 1
UNIPROTKB|J9P1E5 - symbol:LOC100855666 "Uncharacterized p... 572 1.8e-55 1
UNIPROTKB|F1LX84 - symbol:F1LX84 "Uncharacterized protein... 560 3.4e-54 1
UNIPROTKB|E7ESE0 - symbol:RPL9 "60S ribosomal protein L9"... 551 3.0e-53 1
UNIPROTKB|F1M2X8 - symbol:F1M2X8 "Uncharacterized protein... 549 4.9e-53 1
TAIR|locus:2127661 - symbol:AT4G10450 species:3702 "Arabi... 538 7.2e-52 1
GENEDB_PFALCIPARUM|PF13_0129 - symbol:PF13_0129 "ribosoma... 530 5.1e-51 1
UNIPROTKB|Q8IE85 - symbol:PF13_0129 "60S ribosomal protei... 530 5.1e-51 1
TAIR|locus:2206965 - symbol:AT1G33120 species:3702 "Arabi... 515 2.0e-49 1
TAIR|locus:2196646 - symbol:PGY2 "PIGGYBACK2" species:370... 515 2.0e-49 1
UNIPROTKB|D3ZZQ7 - symbol:D3ZZQ7 "Uncharacterized protein... 512 4.1e-49 1
POMBASE|SPAC4G9.16c - symbol:rpl901 "60S ribosomal protei... 492 5.4e-47 1
DICTYBASE|DDB_G0278959 - symbol:rpl9 "60S ribosomal prote... 484 3.8e-46 1
POMBASE|SPCC613.06 - symbol:rpl902 "60S ribosomal protein... 482 6.2e-46 1
CGD|CAL0003957 - symbol:RPL9B species:5476 "Candida albic... 476 2.7e-45 1
ASPGD|ASPL0000053695 - symbol:AN9465 species:162425 "Emer... 467 2.4e-44 1
SGD|S000005011 - symbol:RPL9B "Ribosomal 60S subunit prot... 452 9.3e-43 1
SGD|S000003115 - symbol:RPL9A "Ribosomal 60S subunit prot... 446 4.0e-42 1
UNIPROTKB|G3MWV9 - symbol:G3MWV9 "Uncharacterized protein... 364 2.0e-33 1
UNIPROTKB|H0Y9R4 - symbol:RPL9 "60S ribosomal protein L9"... 213 9.6e-29 2
UNIPROTKB|F1M309 - symbol:F1M309 "Uncharacterized protein... 232 1.9e-19 1
RGD|1585598 - symbol:LOC683597 "similar to ribosomal prot... 225 1.1e-18 1
TIGR_CMR|CHY_2294 - symbol:CHY_2294 "ribosomal protein L6... 131 1.3e-08 1
TIGR_CMR|SPO_0500 - symbol:SPO_0500 "ribosomal protein L6... 124 2.6e-07 1
UNIPROTKB|P46898 - symbol:rplF "50S ribosomal protein L6"... 116 7.3e-06 1
TIGR_CMR|CBU_0253 - symbol:CBU_0253 "ribosomal protein L6... 114 1.4e-05 1
TIGR_CMR|BA_0125 - symbol:BA_0125 "ribosomal protein L6" ... 114 1.5e-05 1
TIGR_CMR|SO_0246 - symbol:SO_0246 "ribosomal protein L6" ... 110 5.1e-05 1
TIGR_CMR|GSU_2842 - symbol:GSU_2842 "ribosomal protein L6... 106 0.00020 1
>FB|FBgn0015756 [details] [associations]
symbol:RpL9 "Ribosomal protein L9" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0005840 "ribosome" evidence=IDA;NAS] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 EMBL:AE014134
GO:GO:0051298 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 GO:GO:0000022 KO:K02940 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053 OMA:AVRTVCS
GeneTree:ENSGT00390000015224 CTD:6133 EMBL:X94613 EMBL:BT022718
PIR:JC6062 RefSeq:NP_477161.1 RefSeq:NP_723644.1 UniGene:Dm.403
ProteinModelPortal:P50882 SMR:P50882 DIP:DIP-20042N IntAct:P50882
MINT:MINT-319853 STRING:P50882 PaxDb:P50882 PRIDE:P50882
EnsemblMetazoa:FBtr0080163 EnsemblMetazoa:FBtr0080164 GeneID:34526
KEGG:dme:Dmel_CG6141 FlyBase:FBgn0015756 InParanoid:P50882
OrthoDB:EOG4WDBTZ PhylomeDB:P50882 ChiTaRS:RPL9 GenomeRNAi:34526
NextBio:788899 Bgee:P50882 GermOnline:CG6141 Uniprot:P50882
Length = 190
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 150/186 (80%), Positives = 165/186 (88%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
MR I SNQ VKIP+ ++ VKAR VT+ G RGTLKR FKHLA+D++M +KR LKVEKWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKY 120
TKKE+AAVRTVCSHI NM+KGVT GF YKMRA YAHFPINCVTSENNT++EIRNFLGEKY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 121 IRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVS 179
IRRV+MAPGV V NS QKDELI+EGNDIE+VS SAALIQQSTTVKNKDIRKFLDGLYVS
Sbjct: 121 IRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVS 180
Query: 180 EKTTVV 185
EKTTVV
Sbjct: 181 EKTTVV 186
>UNIPROTKB|E2R149 [details] [associations]
symbol:RPL9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 KO:K02940
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053 OMA:AVRTVCS
GeneTree:ENSGT00390000015224 CTD:6133 EMBL:AAEX03002535
RefSeq:XP_003434445.1 RefSeq:XP_536256.1 ProteinModelPortal:E2R149
SMR:E2R149 PRIDE:E2R149 Ensembl:ENSCAFT00000008062 GeneID:479109
KEGG:cfa:479109 NextBio:20854340 Uniprot:E2R149
Length = 192
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 125/187 (66%), Positives = 153/187 (81%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M PGV S S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>UNIPROTKB|P32969 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9606 "Homo
sapiens" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0003735 "structural constituent
of ribosome" evidence=NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0005840 "ribosome" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
Reactome:REACT_116125 GO:GO:0005730 GO:GO:0000184 GO:GO:0006413
GO:GO:0003723 GO:GO:0003735 GO:GO:0019843 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
GO:GO:0019083 KO:K02940 eggNOG:COG0097 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 HOGENOM:HOG000039905 OMA:AVRTVCS
CTD:6133 HOVERGEN:HBG000942 OrthoDB:EOG4T4CWJ EMBL:D14531
EMBL:U09953 EMBL:U09954 EMBL:U21138 EMBL:AB062431 EMBL:BC000483
EMBL:BC004156 EMBL:BC004206 EMBL:BC007967 EMBL:BC012149
EMBL:BC031906 EMBL:BC066318 EMBL:BC070214 EMBL:AB007169
IPI:IPI00031691 PIR:S65792 RefSeq:NP_000652.2 RefSeq:NP_001020092.1
UniGene:Hs.412370 UniGene:Hs.513083 UniGene:Hs.730597
UniGene:Hs.741045 PDB:2CQL PDBsum:2CQL ProteinModelPortal:P32969
SMR:P32969 IntAct:P32969 MINT:MINT-5000985 STRING:P32969
PhosphoSite:P32969 DMDM:417677 SWISS-2DPAGE:P32969 PaxDb:P32969
PeptideAtlas:P32969 PRIDE:P32969 DNASU:6133 Ensembl:ENST00000295955
Ensembl:ENST00000449470 GeneID:6133 KEGG:hsa:6133 UCSC:uc003gub.3
HGNC:HGNC:10369 HPA:HPA003372 MIM:603686 neXtProt:NX_P32969
PharmGKB:PA34769 InParanoid:P32969 PhylomeDB:P32969
EvolutionaryTrace:P32969 GenomeRNAi:6133 NextBio:23821
ArrayExpress:P32969 Bgee:P32969 CleanEx:HS_RPL9
Genevestigator:P32969 GermOnline:ENSG00000163682
GermOnline:ENSG00000169653 GermOnline:ENSG00000182754
GermOnline:ENSG00000185078 Uniprot:P32969
Length = 192
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 125/187 (66%), Positives = 153/187 (81%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M PGV S S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>UNIPROTKB|I3LP78 [details] [associations]
symbol:RPL9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0022625 KO:K02940 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 OMA:AVRTVCS GeneTree:ENSGT00390000015224 CTD:6133
EMBL:FP312767 RefSeq:NP_001230410.1 UniGene:Ssc.26752
ProteinModelPortal:I3LP78 SMR:I3LP78 PRIDE:I3LP78
Ensembl:ENSSSCT00000026428 GeneID:100627537 KEGG:ssc:100627537
Uniprot:I3LP78
Length = 192
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 125/187 (66%), Positives = 153/187 (81%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M PGV S S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>UNIPROTKB|Q3SYR7 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9913 "Bos
taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 KO:K02940 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 OMA:AVRTVCS GeneTree:ENSGT00390000015224
EMBL:AY911321 EMBL:BC103427 IPI:IPI00686559 RefSeq:NP_001019640.2
UniGene:Bt.48917 ProteinModelPortal:Q3SYR7 SMR:Q3SYR7 STRING:Q3SYR7
PRIDE:Q3SYR7 Ensembl:ENSBTAT00000019298 GeneID:282884
KEGG:bta:282884 CTD:6133 HOVERGEN:HBG000942 InParanoid:Q3SYR7
OrthoDB:EOG4T4CWJ NextBio:20806412 Uniprot:Q3SYR7
Length = 192
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 125/187 (66%), Positives = 153/187 (81%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M PGV S S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>MGI|MGI:1298373 [details] [associations]
symbol:Rpl9 "ribosomal protein L9" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IC] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IC]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO;IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000702
InterPro:IPR002359 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PROSITE:PS00700 MGI:MGI:1298373 GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0022625 KO:K02940 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 OMA:AVRTVCS CTD:6133 HOVERGEN:HBG000942
OrthoDB:EOG4T4CWJ EMBL:AF260271 EMBL:AK012331 EMBL:AK012445
EMBL:AK017388 EMBL:AK017427 EMBL:AK084278 EMBL:BC013165
EMBL:BC081435 EMBL:BC083166 EMBL:BC083329 EMBL:U17332 EMBL:U17331
IPI:IPI00122413 RefSeq:NP_035422.1 UniGene:Mm.300271
UniGene:Mm.383918 UniGene:Mm.422908 ProteinModelPortal:P51410
SMR:P51410 STRING:P51410 PhosphoSite:P51410 PaxDb:P51410
PRIDE:P51410 Ensembl:ENSMUST00000057885 Ensembl:ENSMUST00000120094
GeneID:20005 KEGG:mmu:20005 InParanoid:P51410 NextBio:297507
Bgee:P51410 CleanEx:MM_RPL9 Genevestigator:P51410
GermOnline:ENSMUSG00000071269 Uniprot:P51410
Length = 192
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 124/187 (66%), Positives = 153/187 (81%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP ++ +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVEITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M GV S S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>RGD|62049 [details] [associations]
symbol:Rpl9 "ribosomal protein L9" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
RGD:62049 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
KO:K02940 eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 HOGENOM:HOG000039905 OMA:AVRTVCS
GeneTree:ENSGT00390000015224 CTD:6133 HOVERGEN:HBG000942
OrthoDB:EOG4T4CWJ EMBL:X51706 EMBL:BC086561 IPI:IPI00515778
PIR:JH0222 RefSeq:NP_001007599.3 RefSeq:XP_002725578.1
RefSeq:XP_002729193.1 RefSeq:XP_003748822.1 RefSeq:XP_003753735.1
UniGene:Rn.107914 UniGene:Rn.201359 ProteinModelPortal:P17077
SMR:P17077 IntAct:P17077 STRING:P17077 PhosphoSite:P17077
PRIDE:P17077 Ensembl:ENSRNOT00000038927 Ensembl:ENSRNOT00000042201
GeneID:100360449 GeneID:100364457 GeneID:29257 KEGG:rno:100360449
KEGG:rno:100364457 KEGG:rno:29257 UCSC:RGD:62049 InParanoid:P17077
NextBio:608568 Genevestigator:P17077 GermOnline:ENSRNOG00000026716
GermOnline:ENSRNOG00000030476 Uniprot:P17077
Length = 192
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 124/187 (66%), Positives = 152/187 (81%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M GV S S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>UNIPROTKB|G3N2H8 [details] [associations]
symbol:G3N2H8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 GeneTree:ENSGT00390000015224
EMBL:DAAA02001715 Ensembl:ENSBTAT00000066335 OMA:SHMENAM
NextBio:20868221 Uniprot:G3N2H8
Length = 191
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 123/186 (66%), Positives = 150/186 (80%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV-LKVEKWF 59
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+ W+
Sbjct: 1 MKTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKRLRVDNWW 60
Query: 60 GTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEK 119
G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L EIRNFLGE
Sbjct: 61 GNRKELATVRTICSHVQNMIKGVTLGFHYKMRSVYAHFPINVVIQENGSLAEIRNFLGET 120
Query: 120 YIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYV 178
YIRRV+M PGV S S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+YV
Sbjct: 121 YIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYV 180
Query: 179 SEKTTV 184
SEK TV
Sbjct: 181 SEKGTV 186
>UNIPROTKB|G3MYL1 [details] [associations]
symbol:Bt.105281 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 OMA:RDTRIFQ
GeneTree:ENSGT00390000015224 EMBL:DAAA02036360
Ensembl:ENSBTAT00000057439 NextBio:20925586 Uniprot:G3MYL1
Length = 192
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 122/187 (65%), Positives = 152/187 (81%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EI+NF GE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIQNFWGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M PGV S S+ Q+DELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRPGVACSVSQAQRDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>UNIPROTKB|G3N0T8 [details] [associations]
symbol:G3N0T8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 GeneTree:ENSGT00390000015224
OMA:EGNDIDN EMBL:DAAA02072417 Ensembl:ENSBTAT00000065194
NextBio:20901425 Uniprot:G3N0T8
Length = 192
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 123/187 (65%), Positives = 150/187 (80%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + VK RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDINVKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNF GE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFWGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYI RV+M PGV S S+ QKDELI+EGNDIE VS SA LIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYICRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAVLIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>UNIPROTKB|D6RAN4 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0005737 GO:GO:0005730 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 HOGENOM:HOG000039905 HGNC:HGNC:10369 EMBL:AC021148
IPI:IPI00965303 ProteinModelPortal:D6RAN4 SMR:D6RAN4
Ensembl:ENST00000503040 ArrayExpress:D6RAN4 Bgee:D6RAN4
Uniprot:D6RAN4
Length = 182
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 123/186 (66%), Positives = 151/186 (81%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYV 178
KYIRRV+M P VS + QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+YV
Sbjct: 121 KYIRRVRMRP---VSQA-QKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYV 176
Query: 179 SEKTTV 184
SEK TV
Sbjct: 177 SEKGTV 182
>UNIPROTKB|G3MXR3 [details] [associations]
symbol:G3MXR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 GeneTree:ENSGT00390000015224
EMBL:DAAA02034597 PRIDE:G3MXR3 Ensembl:ENSBTAT00000064379
OMA:HFPMRVS NextBio:20925657 Uniprot:G3MXR3
Length = 192
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 122/187 (65%), Positives = 150/187 (80%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVNIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNF GE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFPYKMRSVYAHFPINVVIQENGSLVEIRNFGGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYI RV+M PGV S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIHRVRMRPGVACLVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>RGD|1561789 [details] [associations]
symbol:RGD1561789 "similar to 60S ribosomal protein L9"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
RGD:1561789 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
IPI:IPI00369278 RefSeq:XP_001074676.1 RefSeq:XP_003750128.1
RefSeq:XP_345601.1 PRIDE:D3ZMB8 Ensembl:ENSRNOT00000041351
GeneID:100910002 GeneID:366500 KEGG:rno:100910002 KEGG:rno:366500
UCSC:RGD:1561789 CTD:366500 OMA:EKGTMQQ OrthoDB:EOG4ZGPDH
NextBio:689547 Uniprot:D3ZMB8
Length = 192
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 120/187 (64%), Positives = 151/187 (80%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K TV VKGP+GTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVNIPENVDITLKGCTVIVKGPKGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M GV S S+ QKDELI+EGNDIE VS SAA+IQQ+TTVKNKDIRKFLDG+Y
Sbjct: 121 KYIRRVQMRTGVARSVSQAQKDELILEGNDIELVSNSAAVIQQATTVKNKDIRKFLDGIY 180
Query: 178 VSEKTTV 184
VSEK T+
Sbjct: 181 VSEKGTM 187
>UNIPROTKB|E1BUZ8 [details] [associations]
symbol:RPL9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053 OMA:RDTRIFQ
GeneTree:ENSGT00390000015224 EMBL:AADN02031187 IPI:IPI00812619
Ensembl:ENSGALT00000023127 Uniprot:E1BUZ8
Length = 187
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 121/187 (64%), Positives = 150/187 (80%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNK--RVLKVEKW 58
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K R L+V+KW
Sbjct: 1 MKTILSNQTVDIPEQVSVSLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKRRKLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V +N +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQDNGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAP-GVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGL 176
KYIRRV+M P GV + S+ QKDELI+EGNDIE VS S ALIQQ+TTVKNK IRKFLDG+
Sbjct: 121 KYIRRVRMRPVGVSCAVSQAQKDELILEGNDIELVSNSGALIQQATTVKNKKIRKFLDGI 180
Query: 177 YVSEKTT 183
YVSEK T
Sbjct: 181 YVSEKGT 187
>ZFIN|ZDB-GENE-030131-8646 [details] [associations]
symbol:rpl9 "ribosomal protein L9" species:7955
"Danio rerio" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR000702
InterPro:IPR002359 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PROSITE:PS00700 ZFIN:ZDB-GENE-030131-8646
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 KO:K02940
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 GeneTree:ENSGT00390000015224 CTD:6133
HOVERGEN:HBG000942 EMBL:CR759875 EMBL:AY648736 IPI:IPI00497811
RefSeq:NP_001003861.1 UniGene:Dr.29079 SMR:Q6DRM3 STRING:Q6DRM3
Ensembl:ENSDART00000054340 GeneID:336702 KEGG:dre:336702
InParanoid:Q6DRM3 NextBio:20811865 Uniprot:Q6DRM3
Length = 193
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 118/188 (62%), Positives = 152/188 (80%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K RTVTVKGPRG L+R+F H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPDNVTVSLKGRTVTVKGPRGVLRREFNHINLELSLLGKKQKKLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V E+ +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQESGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVS-NSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIRRV+M GV + ++ QKDEL++EGNDIE VS SAALIQQ+TTV+ KDIRKFLDG+Y
Sbjct: 121 KYIRRVRMRQGVACAVSAAQKDELVLEGNDIELVSNSAALIQQATTVRKKDIRKFLDGIY 180
Query: 178 VSEKTTVV 185
VSEK TVV
Sbjct: 181 VSEKGTVV 188
>UNIPROTKB|F6PWD5 [details] [associations]
symbol:F6PWD5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 GeneTree:ENSGT00390000015224
IPI:IPI00686559 EMBL:DAAA02020438 Ensembl:ENSBTAT00000023649
OMA:TINIRNF Uniprot:F6PWD5
Length = 192
Score = 610 (219.8 bits), Expect = 1.7e-59, P = 1.7e-59
Identities = 120/186 (64%), Positives = 147/186 (79%)
Query: 2 RQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKWF 59
+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L V+KW+
Sbjct: 2 KTILSNQTVDIPENVDINLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLHVDKWW 61
Query: 60 GTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEK 119
G +KE+A VRT+CS + NM+K VT GF YKMR+ YAHFPIN V EN +L+EIRNF GEK
Sbjct: 62 GNRKELATVRTICSQVQNMIKSVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFWGEK 121
Query: 120 YIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYV 178
YI RV+M PGV S S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+YV
Sbjct: 122 YICRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYV 181
Query: 179 SEKTTV 184
SEK TV
Sbjct: 182 SEKGTV 187
>UNIPROTKB|F1NS91 [details] [associations]
symbol:RPL9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053 OMA:AVRTVCS
GeneTree:ENSGT00390000015224 EMBL:AADN02015873 EMBL:AADN02015874
EMBL:AADN02015875 EMBL:AADN02015876 EMBL:AADN02015877
EMBL:AADN02015878 EMBL:AADN02015879 EMBL:AADN02015880
EMBL:AADN02015886 EMBL:AADN02015881 EMBL:AADN02015882
EMBL:AADN02015883 EMBL:AADN02015884 EMBL:AADN02015885
EMBL:AADN02015867 EMBL:AADN02015868 EMBL:AADN02015869
EMBL:AADN02015870 EMBL:AADN02015871 EMBL:AADN02015872
IPI:IPI00601775 Ensembl:ENSGALT00000000206 Uniprot:F1NS91
Length = 181
Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
Identities = 117/176 (66%), Positives = 144/176 (81%)
Query: 12 IPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNK--RVLKVEKWFGTKKEIAAVR 69
IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K R L+V+KW+G +KE+A VR
Sbjct: 1 IPEQVSVSLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKRRKLRVDKWWGNRKELATVR 60
Query: 70 TVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMAPG 129
T+CSH+ NM+KGVT GF YKMR+ YAHFPIN V +N +L+EIRNFLGEKYIRRV+M PG
Sbjct: 61 TICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQDNGSLVEIRNFLGEKYIRRVRMRPG 120
Query: 130 VKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 184
V + S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+YVSEK TV
Sbjct: 121 VSCAVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 176
>UNIPROTKB|H0Y9V9 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0005737 GO:GO:0005730 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 HGNC:HGNC:10369 EMBL:AC021148
Ensembl:ENST00000508595 Uniprot:H0Y9V9
Length = 189
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 116/168 (69%), Positives = 141/168 (83%)
Query: 20 VKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKWFGTKKEIAAVRTVCSHISN 77
+K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW+G +KE+A VRT+CSH+ N
Sbjct: 17 LKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKELATVRTICSHVQN 76
Query: 78 MLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKMAPGVKVSNSK- 136
M+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGEKYIRRV+M PGV S S+
Sbjct: 77 MIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQA 136
Query: 137 QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 184
QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+YVSEK TV
Sbjct: 137 QKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 184
>RGD|1561928 [details] [associations]
symbol:RGD1561928 "similar to ribosomal protein L9"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR000702 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 RGD:1561928 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 GeneTree:ENSGT00390000015224
IPI:IPI00959106 PRIDE:F1M7A9 Ensembl:ENSRNOT00000042609
Uniprot:F1M7A9
Length = 192
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 118/186 (63%), Positives = 145/186 (77%)
Query: 2 RQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKWF 59
+ I+SNQTV IP + +K RT V+GPRGTL+RDF H+ +++ ++ K+ L+V+KW+
Sbjct: 2 KTILSNQTVDIPENVDITLKGRTAIVEGPRGTLRRDFNHINVELSLLGKKEKRLRVDKWW 61
Query: 60 GTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEK 119
G KE+A VRT+CSH+ N++KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGEK
Sbjct: 62 GNGKELATVRTICSHVQNVIKGVTLGFCYKMRSVYAHFPINVVIQENGSLVEIRNFLGEK 121
Query: 120 YIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYV 178
YIRRV M V S S+ QKDELI+EGNDIE VS SAALIQQ TTVKNKDI KFLDG+YV
Sbjct: 122 YIRRVWMRTNVACSVSQAQKDELILEGNDIELVSNSAALIQQGTTVKNKDISKFLDGIYV 181
Query: 179 SEKTTV 184
SEK TV
Sbjct: 182 SEKGTV 187
>RGD|1559566 [details] [associations]
symbol:RGD1559566 "similar to 60S ribosomal protein L9"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
RGD:1559566 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
OrthoDB:EOG4ZGPDH IPI:IPI00203400 RefSeq:XP_001056263.1
RefSeq:XP_003752034.1 RefSeq:XP_234521.1 Ensembl:ENSRNOT00000042622
GeneID:100911472 GeneID:314434 KEGG:rno:100911472 KEGG:rno:314434
UCSC:RGD:1559566 CTD:314434 NextBio:667677 Uniprot:D4ABC9
Length = 193
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 116/184 (63%), Positives = 145/184 (78%)
Query: 4 IVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKWFGT 61
I+SN+TV IP + +K TV V+ PRGTL+RDF H+ +++ ++ K+ L V+KW+G
Sbjct: 5 ILSNETVDIPENVDITLKGCTVIVRDPRGTLRRDFNHINVELSLLGKKKKRLCVDKWWGN 64
Query: 62 KKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYI 121
KE+A VRT+CSH+ NM+KGVT GF Y+MR+ AHFPIN + EN +L+EIRNFLGEKYI
Sbjct: 65 SKELATVRTICSHVQNMIKGVTLGFCYEMRSVDAHFPINVIIQENGSLVEIRNFLGEKYI 124
Query: 122 RRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSE 180
RRV+M GV S S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+YVSE
Sbjct: 125 RRVRMRTGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSE 184
Query: 181 KTTV 184
K TV
Sbjct: 185 KGTV 188
>WB|WBGene00004420 [details] [associations]
symbol:rpl-9 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] [GO:0009408 "response to heat"
evidence=IMP] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
GO:GO:0006412 GO:GO:0010171 GO:GO:0000003 GO:GO:0009408
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 EMBL:FO080424 KO:K02940
eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 OMA:AVRTVCS GeneTree:ENSGT00390000015224
RefSeq:NP_498660.1 ProteinModelPortal:Q95Y90 SMR:Q95Y90
DIP:DIP-26431N IntAct:Q95Y90 MINT:MINT-214155 STRING:Q95Y90
PaxDb:Q95Y90 PRIDE:Q95Y90 EnsemblMetazoa:R13A5.8.1
EnsemblMetazoa:R13A5.8.2 GeneID:176071 KEGG:cel:CELE_R13A5.8
UCSC:R13A5.8.1 CTD:176071 WormBase:R13A5.8 InParanoid:Q95Y90
NextBio:890984 Uniprot:Q95Y90
Length = 189
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 112/189 (59%), Positives = 144/189 (76%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
M+ I SN TV P G+ VK R V V GPRGT+++DF+HL +++ + K L+V KWFG
Sbjct: 1 MKLIESNDTVVFPEGVTFTVKNRIVHVTGPRGTIRKDFRHLHMEMERIGKSTLRVRKWFG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKY 120
+KE+AA+RTVCSHI NM+KGVT GF YKMR+ YAHFPIN + N +EIRNFLGEK
Sbjct: 61 VRKELAAIRTVCSHIKNMIKGVTVGFRYKMRSVYAHFPINVTLQDGNRTVEIRNFLGEKI 120
Query: 121 IRRVKMAPGVKVS-NSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVS 179
+RRV + GV + ++ QKDE+++EGND++ VS++AA IQQST VK KDIRKFLDG+YVS
Sbjct: 121 VRRVPLPEGVIATISTAQKDEIVVEGNDVQFVSQAAARIQQSTAVKEKDIRKFLDGIYVS 180
Query: 180 EKTTVV-TD 187
EKTT+V TD
Sbjct: 181 EKTTIVPTD 189
>UNIPROTKB|J9NVY8 [details] [associations]
symbol:J9NVY8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 EMBL:AAEX03008706
Ensembl:ENSCAFT00000001006 Uniprot:J9NVY8
Length = 192
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 116/187 (62%), Positives = 144/187 (77%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K TV VKGPRGTL+RDF H+ +++ ++ K+ ++V+KW
Sbjct: 1 MKIILSNQTVNIPENVDNTLKGCTVIVKGPRGTLRRDFNHINVELSLLGKKKKRIRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G KE+ V T+CSHI NM+KGVT+GF YKM + YAHF IN V EN +L+EIRNFLGE
Sbjct: 61 WGNTKELTTVCTMCSHIQNMIKGVTQGFCYKMTSVYAHFRINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYIR V M PGV S S+ QKDELI+EGNDIE VS SAALIQQ+ TVK+KDIRKF DG+Y
Sbjct: 121 KYIRGVWMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQAITVKDKDIRKFGDGIY 180
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 181 VSEKGTV 187
>UNIPROTKB|J9P1E5 [details] [associations]
symbol:LOC100855666 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR000702 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 EMBL:AAEX03002898
RefSeq:XP_003639053.1 Ensembl:ENSCAFT00000025164 GeneID:100855666
KEGG:cfa:100855666 Uniprot:J9P1E5
Length = 191
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 112/186 (60%), Positives = 143/186 (76%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV-LKVEKWF 59
M+ I+SN+TV IP + +K TV VKGPRGTL+R+F H+ I++ + K+ L+ +KW+
Sbjct: 1 MKTILSNKTVDIPENVDITLKGCTVIVKGPRGTLRRNFNHINIELSLPGKKKRLQADKWW 60
Query: 60 GTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEK 119
G +KE+A + T+CSH+ NM+KG+T GF YKMR+ YAHFPIN V EN +L+EIRNFLGEK
Sbjct: 61 GNRKELATICTICSHVQNMIKGMTLGFCYKMRSVYAHFPINVVIQENVSLVEIRNFLGEK 120
Query: 120 YIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYV 178
YI RV+M PGV S S+ QKDELI+EGNDIE V SAA IQQ+TTVKN+DIRK L G+YV
Sbjct: 121 YIHRVRMRPGVACSVSQAQKDELILEGNDIELVLNSAASIQQATTVKNQDIRKILGGIYV 180
Query: 179 SEKTTV 184
SE TV
Sbjct: 181 SENGTV 186
>UNIPROTKB|F1LX84 [details] [associations]
symbol:F1LX84 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 IPI:IPI00189880
Ensembl:ENSRNOT00000048551 Uniprot:F1LX84
Length = 194
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 109/179 (60%), Positives = 138/179 (77%)
Query: 9 TVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKWFGTKKEIA 66
+V IP + +K TV VKGPRGTL+RDF H+++++ ++ K+ L+V+KW+G +KE+A
Sbjct: 11 SVNIPENVDITLKGHTVIVKGPRGTLRRDFNHISVELSLLGKKKKRLRVDKWWGNRKELA 70
Query: 67 AVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRVKM 126
VRT+CS + N++KGVT GF YK R+ AHFPIN V EN +L+EI+NFLGEKYIRRV+M
Sbjct: 71 TVRTICSRVQNLIKGVTLGFRYKRRSVCAHFPINVVVQENGSLVEIQNFLGEKYIRRVRM 130
Query: 127 APGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 184
V S S QKDELI+EGN IE VS S ALIQQ+TTVKNKDIRKFLDG+YVSEK TV
Sbjct: 131 RTSVACSVSPAQKDELILEGNGIELVSNSTALIQQATTVKNKDIRKFLDGIYVSEKGTV 189
>UNIPROTKB|E7ESE0 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HGNC:HGNC:10369 EMBL:AC021148 IPI:IPI00966707
ProteinModelPortal:E7ESE0 SMR:E7ESE0 Ensembl:ENST00000504470
ArrayExpress:E7ESE0 Bgee:E7ESE0 Uniprot:E7ESE0
Length = 166
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 106/166 (63%), Positives = 133/166 (80%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV IP + +K RTV VKGPRGTL+RDF H+ +++ ++ K+ L+V+KW
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKW 60
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+G +KE+A VRT+CSH+ NM+KGVT GF YKMR+ YAHFPIN V EN +L+EIRNFLGE
Sbjct: 61 WGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTT 163
KYIRRV+M PGV S S+ QKDELI+EGNDIE VS SAALIQQ+TT
Sbjct: 121 KYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATT 166
>UNIPROTKB|F1M2X8 [details] [associations]
symbol:F1M2X8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 IPI:IPI00393445
Ensembl:ENSRNOT00000033203 Uniprot:F1M2X8
Length = 189
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 113/184 (61%), Positives = 142/184 (77%)
Query: 6 SNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKWFGTKK 63
S QTV IP + +K RTV VKGP GTL+RDF H+ +++ ++ K+ L+V+KW+G K
Sbjct: 6 SQQTVNIPENVDISLKGRTVIVKGP-GTLRRDFNHINVELSLLGKKKKRLRVDKWWGNGK 64
Query: 64 EIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRR 123
E+A VRT+CS + NM+KG+T GF YKMR+ YAHFPIN VT EN +L+EI+NFL EKYIRR
Sbjct: 65 ELATVRTICSRVQNMIKGMTLGFHYKMRSVYAHFPINVVTQENGSLVEIQNFLDEKYIRR 124
Query: 124 VKMAPGV---KVSNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSE 180
V+M+ GV VS + QKDELI+EGNDIE VS SAALI+ TVKNK+IRKFLDG+YVSE
Sbjct: 125 VRMSTGVVAYSVSQA-QKDELILEGNDIELVSNSAALIK---TVKNKNIRKFLDGIYVSE 180
Query: 181 KTTV 184
K TV
Sbjct: 181 KGTV 184
>TAIR|locus:2127661 [details] [associations]
symbol:AT4G10450 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015934 "large ribosomal
subunit" evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0001510 "RNA
methylation" evidence=RCA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:AL161517 EMBL:AL049524 GO:GO:0022625 KO:K02940
eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 ProtClustDB:CLSN2685696 EMBL:AY065259
EMBL:AY117346 EMBL:AY086090 IPI:IPI00517389 PIR:T04180
RefSeq:NP_192783.1 UniGene:At.24000 ProteinModelPortal:Q9SZX9
SMR:Q9SZX9 STRING:Q9SZX9 PaxDb:Q9SZX9 PRIDE:Q9SZX9
EnsemblPlants:AT4G10450.1 GeneID:826637 KEGG:ath:AT4G10450
GeneFarm:419 TAIR:At4g10450 InParanoid:Q9SZX9 OMA:AVRTVCS
PhylomeDB:Q9SZX9 Genevestigator:Q9SZX9 GermOnline:AT4G10450
Uniprot:Q9SZX9
Length = 194
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 105/193 (54%), Positives = 138/193 (71%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVN-----KRVLKV 55
M+ I+S++T+ IP G+ V A+ + V+GPRG L RDFKHL +D ++ KR LK+
Sbjct: 1 MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60
Query: 56 EKWFGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNF 115
+ WFG++K A++RT SH+ N++ GVT+GFLY+MR YAHFPIN NN +EIRNF
Sbjct: 61 DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120
Query: 116 LGEKYIRRVKMAPGVKVSNS-KQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLD 174
LGEK +R+V+M GVK+ S K KDE+I+EGNDIE VSRS ALI Q VK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180
Query: 175 GLYVSEKTTVVTD 187
G+YVSEK + +
Sbjct: 181 GIYVSEKGKIAVE 193
>GENEDB_PFALCIPARUM|PF13_0129 [details] [associations]
symbol:PF13_0129 "ribosomal protein L6
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0015934 "large
ribosomal subunit" evidence=ISS] InterPro:IPR000702
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0019843 EMBL:AL844509
GO:GO:0015934 KO:K02940 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 HOGENOM:HOG000039905 RefSeq:XP_001349971.1
ProteinModelPortal:Q8IE85 IntAct:Q8IE85 MINT:MINT-1554718
PRIDE:Q8IE85 EnsemblProtists:PF13_0129:mRNA GeneID:814100
KEGG:pfa:PF13_0129 EuPathDB:PlasmoDB:PF3D7_1323100 OMA:EGNDIDN
ProtClustDB:PTZ00027 Uniprot:Q8IE85
Length = 190
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 107/189 (56%), Positives = 131/189 (69%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVN-KRVLKVEKWF 59
M+ IVS Q V IP G++ + AR VTV G GTL+R F+HL IDI + K+ +KV WF
Sbjct: 1 MKTIVSTQKVLIPEGVKVAINARKVTVSGKYGTLRRSFRHLPIDIRLNKLKKYIKVVMWF 60
Query: 60 GTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEK 119
G +A +RTVC+H+ NM GVTK FLYKMR +AHFPIN +NNT +EIRN+LGEK
Sbjct: 61 GVPDSLACIRTVCTHLKNMFTGVTKKFLYKMRLVHAHFPINSNIVDNNTRIEIRNYLGEK 120
Query: 120 YIRRVKMAPGVKVSNSKQ-KDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYV 178
+R VK PGV + S KDE+ + G DIENVS +AALI QS +NKDIRKFLDG+YV
Sbjct: 121 SVRFVKALPGVVIEKSPNVKDEIYVSGADIENVSLTAALIHQSVLCRNKDIRKFLDGIYV 180
Query: 179 SEKTTVVTD 187
SE TTV D
Sbjct: 181 SEVTTVEKD 189
>UNIPROTKB|Q8IE85 [details] [associations]
symbol:PF13_0129 "60S ribosomal protein L6, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000702 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0019843 EMBL:AL844509 GO:GO:0015934 KO:K02940
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 RefSeq:XP_001349971.1
ProteinModelPortal:Q8IE85 IntAct:Q8IE85 MINT:MINT-1554718
PRIDE:Q8IE85 EnsemblProtists:PF13_0129:mRNA GeneID:814100
KEGG:pfa:PF13_0129 EuPathDB:PlasmoDB:PF3D7_1323100 OMA:EGNDIDN
ProtClustDB:PTZ00027 Uniprot:Q8IE85
Length = 190
Score = 530 (191.6 bits), Expect = 5.1e-51, P = 5.1e-51
Identities = 107/189 (56%), Positives = 131/189 (69%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVN-KRVLKVEKWF 59
M+ IVS Q V IP G++ + AR VTV G GTL+R F+HL IDI + K+ +KV WF
Sbjct: 1 MKTIVSTQKVLIPEGVKVAINARKVTVSGKYGTLRRSFRHLPIDIRLNKLKKYIKVVMWF 60
Query: 60 GTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEK 119
G +A +RTVC+H+ NM GVTK FLYKMR +AHFPIN +NNT +EIRN+LGEK
Sbjct: 61 GVPDSLACIRTVCTHLKNMFTGVTKKFLYKMRLVHAHFPINSNIVDNNTRIEIRNYLGEK 120
Query: 120 YIRRVKMAPGVKVSNSKQ-KDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYV 178
+R VK PGV + S KDE+ + G DIENVS +AALI QS +NKDIRKFLDG+YV
Sbjct: 121 SVRFVKALPGVVIEKSPNVKDEIYVSGADIENVSLTAALIHQSVLCRNKDIRKFLDGIYV 180
Query: 179 SEKTTVVTD 187
SE TTV D
Sbjct: 181 SEVTTVEKD 189
>TAIR|locus:2206965 [details] [associations]
symbol:AT1G33120 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015934 "large ribosomal
subunit" evidence=ISS] [GO:0019843 "rRNA binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR000702
InterPro:IPR002359 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PROSITE:PS00700 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005774
GO:GO:0005730 GO:GO:0006412 GO:GO:0009941 GO:GO:0003735
GO:GO:0019843 GO:GO:0022625 GO:GO:0009955 KO:K02940 EMBL:AC021045
eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
EMBL:X91958 EMBL:AF324688 EMBL:AF326873 EMBL:AF339694 EMBL:AF375419
EMBL:AY039593 EMBL:AY054156 EMBL:AY058051 EMBL:AY072446
EMBL:AY128910 EMBL:Z17727 EMBL:Z17728 IPI:IPI00545250 PIR:F86455
PIR:S71255 RefSeq:NP_564417.1 RefSeq:NP_564418.1 UniGene:At.22864
UniGene:At.23014 UniGene:At.68560 ProteinModelPortal:P49209
SMR:P49209 IntAct:P49209 STRING:P49209 PaxDb:P49209 PRIDE:P49209
EnsemblPlants:AT1G33120.1 EnsemblPlants:AT1G33140.1 GeneID:840208
GeneID:840211 KEGG:ath:AT1G33120 KEGG:ath:AT1G33140 GeneFarm:416
GeneFarm:420 TAIR:At1g33120 TAIR:At1g33140 HOGENOM:HOG000039905
InParanoid:P49209 OMA:RDTRIFQ PhylomeDB:P49209
ProtClustDB:CLSN2685696 Genevestigator:P49209 GermOnline:AT1G33120
Uniprot:P49209
Length = 194
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 100/193 (51%), Positives = 136/193 (70%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVN-----KRVLKV 55
M+ I+S++T+ IP + V A+ + V+GPRG L RDFKHL +D ++ K+ LK+
Sbjct: 1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60
Query: 56 EKWFGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNF 115
+ WFGT+K A++RT SH+ N++ GVT+GF YKMR YAHFPIN + +EIRNF
Sbjct: 61 DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120
Query: 116 LGEKYIRRVKMAPGVKVSNS-KQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLD 174
LGEK +R+V+M GV + S K KDE++++GNDIE VSRS ALI Q VK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180
Query: 175 GLYVSEKTTVVTD 187
G+YVSEK+ +V +
Sbjct: 181 GIYVSEKSKIVEE 193
>TAIR|locus:2196646 [details] [associations]
symbol:PGY2 "PIGGYBACK2" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0005773 "vacuole" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0009955 "adaxial/abaxial pattern
specification" evidence=IGI] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=RCA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506
GO:GO:0005774 GO:GO:0005730 GO:GO:0006412 GO:GO:0009941
GO:GO:0003735 GO:GO:0019843 GO:GO:0022625 GO:GO:0009955 KO:K02940
EMBL:AC021045 eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 EMBL:X91958 EMBL:AF324688 EMBL:AF326873
EMBL:AF339694 EMBL:AF375419 EMBL:AY039593 EMBL:AY054156
EMBL:AY058051 EMBL:AY072446 EMBL:AY128910 EMBL:Z17727 EMBL:Z17728
IPI:IPI00545250 PIR:F86455 PIR:S71255 RefSeq:NP_564417.1
RefSeq:NP_564418.1 UniGene:At.22864 UniGene:At.23014
UniGene:At.68560 ProteinModelPortal:P49209 SMR:P49209 IntAct:P49209
STRING:P49209 PaxDb:P49209 PRIDE:P49209 EnsemblPlants:AT1G33120.1
EnsemblPlants:AT1G33140.1 GeneID:840208 GeneID:840211
KEGG:ath:AT1G33120 KEGG:ath:AT1G33140 GeneFarm:416 GeneFarm:420
TAIR:At1g33120 TAIR:At1g33140 HOGENOM:HOG000039905
InParanoid:P49209 OMA:RDTRIFQ PhylomeDB:P49209
ProtClustDB:CLSN2685696 Genevestigator:P49209 GermOnline:AT1G33120
Uniprot:P49209
Length = 194
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 100/193 (51%), Positives = 136/193 (70%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVN-----KRVLKV 55
M+ I+S++T+ IP + V A+ + V+GPRG L RDFKHL +D ++ K+ LK+
Sbjct: 1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60
Query: 56 EKWFGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNF 115
+ WFGT+K A++RT SH+ N++ GVT+GF YKMR YAHFPIN + +EIRNF
Sbjct: 61 DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120
Query: 116 LGEKYIRRVKMAPGVKVSNS-KQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLD 174
LGEK +R+V+M GV + S K KDE++++GNDIE VSRS ALI Q VK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180
Query: 175 GLYVSEKTTVVTD 187
G+YVSEK+ +V +
Sbjct: 181 GIYVSEKSKIVEE 193
>UNIPROTKB|D3ZZQ7 [details] [associations]
symbol:D3ZZQ7 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 OrthoDB:EOG4ZGPDH IPI:IPI00209078
Ensembl:ENSRNOT00000028742 Uniprot:D3ZZQ7
Length = 190
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 111/187 (59%), Positives = 138/187 (73%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
M+ I+SNQTV P+ + +K TV +KGPRGTL+RDF H+ +++ ++ K+ L V+K
Sbjct: 1 MKIILSNQTVDNPKNVDITLKEHTV-IKGPRGTLRRDFNHINVELSLLGKKKKRLCVDKC 59
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
G +KE+A VRT CSH+ +KGVT GF Y+MR+ A FPIN V EN +L+EIRNFLGE
Sbjct: 60 GGNRKELATVRTSCSHVQTTMKGVTLGFHYEMRSV-ASFPINVVIQENWSLVEIRNFLGE 118
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYI RV M GV S S+ QKDELI+EGNDIE V SAAL QQ+TTVKNKDIRKFLDG+
Sbjct: 119 KYICRVWMRTGVACSVSQAQKDELILEGNDIELVPNSAALTQQATTVKNKDIRKFLDGIR 178
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 179 VSEKGTV 185
>POMBASE|SPAC4G9.16c [details] [associations]
symbol:rpl901 "60S ribosomal protein L9" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR000702
InterPro:IPR002359 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PROSITE:PS00700 PomBase:SPAC4G9.16c GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 GO:GO:0022625 KO:K02940 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 OMA:AVRTVCS PIR:T38875 RefSeq:NP_593698.1
ProteinModelPortal:Q10232 STRING:Q10232 PRIDE:Q10232
EnsemblFungi:SPAC4G9.16c.1 GeneID:2543380 KEGG:spo:SPAC4G9.16c
OrthoDB:EOG4RJK9X NextBio:20804395 Uniprot:Q10232
Length = 190
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 100/185 (54%), Positives = 134/185 (72%)
Query: 2 RQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNK-RVLKVEKWFG 60
R I ++T+ IP+G+ +KAR VTV GPRGTLK++ +H +DI M + +K W G
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRH--VDIEMKKQGNTIKFIVWHG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKY 120
++K A +R+V S I+NM+ GVT+GF YKMR YAHFPIN +EN T++EIRNFLGE+
Sbjct: 61 SRKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERI 120
Query: 121 IRRVKMAPGVKVS-NSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVS 179
R +K PGV VS +S KDE+I+EGN +ENVS+SAA I+Q V+NKDIRKFLDG+YVS
Sbjct: 121 TRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVS 180
Query: 180 EKTTV 184
E+ +
Sbjct: 181 ERGNI 185
>DICTYBASE|DDB_G0278959 [details] [associations]
symbol:rpl9 "60S ribosomal protein L9" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000702
InterPro:IPR002359 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PROSITE:PS00700 dictyBase:DDB_G0278959
GO:GO:0045335 GenomeReviews:CM000152_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AAFI02000024 GO:GO:0019843 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053 HSSP:P32969
OMA:AVRTVCS RefSeq:XP_647818.2 ProteinModelPortal:Q54XI5
STRING:Q54XI5 PRIDE:Q54XI5 EnsemblProtists:DDB0231259
GeneID:8621778 KEGG:ddi:DDB_G0278959 Uniprot:Q54XI5
Length = 188
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 89/185 (48%), Positives = 130/185 (70%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
M+ I S++ V+IP + VK R+V V GPRGTL + F H ++DI++V K+ L V+ WFG
Sbjct: 1 MKVINSSRKVQIPENVTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKY 120
+K+IA ++T+ S I NM+ GVTKG+ YKMR YAHFPIN ++ ++EIRNF GEK
Sbjct: 61 NRKQIACIKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKI 120
Query: 121 IRRVKMAPGVKV-SNSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVS 179
+RR+++ G+ N K KDE+++ GN +E +S+S A IQ + +K KD+RKFLDG+YVS
Sbjct: 121 VRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVS 180
Query: 180 EKTTV 184
E+ +
Sbjct: 181 ERNVL 185
>POMBASE|SPCC613.06 [details] [associations]
symbol:rpl902 "60S ribosomal protein L9" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
PomBase:SPCC613.06 GO:GO:0005730 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0019843
GO:GO:0022625 KO:K02940 Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 HOGENOM:HOG000039905 OMA:RDTRIFQ OrthoDB:EOG4RJK9X
PIR:T41472 RefSeq:NP_587694.1 ProteinModelPortal:O74905
STRING:O74905 PRIDE:O74905 EnsemblFungi:SPCC613.06.1 GeneID:2539464
KEGG:spo:SPCC613.06 NextBio:20800626 Uniprot:O74905
Length = 189
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 98/184 (53%), Positives = 130/184 (70%)
Query: 2 RQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGT 61
R I ++T+ IP G+ +KAR VTVKGPRG LK++ + + I++ + K W G+
Sbjct: 3 RDIYKDETLTIPEGVSVDIKARLVTVKGPRGVLKQNLRRVDIELKKQGNTI-KFIVWHGS 61
Query: 62 KKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYI 121
+K A +RT S I+NM+ GVT+GF YKMR YAHFPIN +EN T++EIRNFLGE+
Sbjct: 62 RKHNACIRTAYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERIT 121
Query: 122 RRVKMAPGVKVS-NSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSE 180
R +K PGV VS +S KDE+IIEGN +ENVS+SAA I+Q V+NKDIRKFLDG+YVSE
Sbjct: 122 RVIKCLPGVTVSISSAVKDEIIIEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSE 181
Query: 181 KTTV 184
+ +
Sbjct: 182 RGNI 185
>CGD|CAL0003957 [details] [associations]
symbol:RPL9B species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0002181 "cytoplasmic translation"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
CGD:CAL0003957 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 EMBL:AACQ01000027 EMBL:AACQ01000026 KO:K02940
eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 RefSeq:XP_719935.1 RefSeq:XP_720065.1
ProteinModelPortal:Q5AEN2 STRING:Q5AEN2 GeneID:3638287
GeneID:3638348 KEGG:cal:CaO19.236 KEGG:cal:CaO19.7866
Uniprot:Q5AEN2
Length = 191
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 96/190 (50%), Positives = 132/190 (69%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
M+ I ++Q + IP G+ +KAR V V GPRG L +D KH+ + + +N R +K+ G
Sbjct: 1 MKYIQTDQILDIPEGVTVDIKARVVKVTGPRGELTKDLKHIDVTFNKINNRAIKITVHNG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINC--VTSENNTLLEIRNFLGE 118
+K +AA+RTV S I+N++ GVTKG+ YKMR YAHFPIN + + +EIRNFLGE
Sbjct: 61 DRKHVAALRTVKSLIANLITGVTKGYKYKMRFVYAHFPINVNIIKKDGQDYVEIRNFLGE 120
Query: 119 KYIRRVKMAPGVKVS-NSKQKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
K +R VK+ GV + +S QKDELI+ GN +E VS++AA IQQ V+NKDIRKFLDG+Y
Sbjct: 121 KRVREVKIHEGVTMEISSTQKDELIVSGNSLEAVSQNAADIQQICRVRNKDIRKFLDGIY 180
Query: 178 VSEKTTVVTD 187
VSE+ T+V +
Sbjct: 181 VSERGTIVEE 190
>ASPGD|ASPL0000053695 [details] [associations]
symbol:AN9465 species:162425 "Emericella nidulans"
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 EMBL:BN001308
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 KO:K02940
eggNOG:COG0097 Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 OMA:AVRTVCS EMBL:AACD01000192
RefSeq:XP_868847.1 ProteinModelPortal:Q5AQG5 STRING:Q5AQG5
EnsemblFungi:CADANIAT00001236 GeneID:3684062 KEGG:ani:AN9465.2
Uniprot:Q5AQG5
Length = 192
Score = 467 (169.5 bits), Expect = 2.4e-44, P = 2.4e-44
Identities = 100/193 (51%), Positives = 131/193 (67%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
MR I S +T+ IP ++ +++R VTV+GPRG L +D H+A+ K V+ +E G
Sbjct: 1 MRYIHSEETLPIPENVKVHIRSRVVTVEGPRGKLTKDLSHIAVTFGRPKKDVISIEMHHG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTL-----LEIRNF 115
++K +A +RTV + I+N++ GVTKGF YKMR YAHFPIN V E N +EIRNF
Sbjct: 61 SRKGVATLRTVRTLINNLIIGVTKGFKYKMRYVYAHFPIN-VNIEKNAETGQYDVEIRNF 119
Query: 116 LGEKYIRRVKMAPGVKVSNSKQ-KDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLD 174
LGEKY+RRV PGV++ S KDEL + GN +E VS+SAA IQQ V+NKDIRKFLD
Sbjct: 120 LGEKYVRRVVCQPGVEIIASPNVKDELQLSGNSLEAVSQSAADIQQICRVRNKDIRKFLD 179
Query: 175 GLYVSEKTTVVTD 187
GLYVSEK +V +
Sbjct: 180 GLYVSEKGNIVEE 192
>SGD|S000005011 [details] [associations]
symbol:RPL9B "Ribosomal 60S subunit protein L9B" species:4932
"Saccharomyces cerevisiae" [GO:0002181 "cytoplasmic translation"
evidence=IDA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=IDA] [GO:0019843 "rRNA binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR000702 InterPro:IPR002359 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700 SGD:S000005011
EMBL:BK006947 GO:GO:0003735 GO:GO:0002181 EMBL:U12141 GO:GO:0019843
EMBL:X86470 EMBL:Z71343 GO:GO:0022625 KO:K02940 eggNOG:COG0097
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
HOGENOM:HOG000039905 OMA:AVRTVCS OrthoDB:EOG4RJK9X
GeneTree:ENSGT00390000015224 EMBL:AY693129 PIR:S53915
RefSeq:NP_014332.1 ProteinModelPortal:P51401 SMR:P51401
IntAct:P51401 MINT:MINT-2732420 STRING:P51401 PaxDb:P51401
PeptideAtlas:P51401 EnsemblFungi:YNL067W GeneID:855658
KEGG:sce:YNL067W CYGD:YNL067w NextBio:979917 Genevestigator:P51401
GermOnline:YNL067W Uniprot:P51401
Length = 191
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 91/190 (47%), Positives = 128/190 (67%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
M+ I + Q ++IP G+ +K+R V V GPRGTL ++ KH+ + VN +++KV G
Sbjct: 1 MKYIQTEQQIEIPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINC--VTSENNTLLEIRNFLGE 118
+K +AA+RTV S + NM+ GVTKG+ YKMR YAHFPIN V + +E+RNFLG+
Sbjct: 61 DRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD 120
Query: 119 KYIRRVKMAPGVKVSNSKQ-KDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
K IR V + GV + S KDE+++ GN +E+VS++AA +QQ V+NKDIRKFLDG+Y
Sbjct: 121 KKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIY 180
Query: 178 VSEKTTVVTD 187
VS K +V D
Sbjct: 181 VSHKGFIVED 190
>SGD|S000003115 [details] [associations]
symbol:RPL9A "Ribosomal 60S subunit protein L9A" species:4932
"Saccharomyces cerevisiae" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IDA] [GO:0002181 "cytoplasmic translation"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PROSITE:PS00700
SGD:S000003115 EMBL:BK006941 GO:GO:0003735 GO:GO:0002181
GO:GO:0019843 EMBL:X60190 EMBL:X99960 PDB:4B6A PDBsum:4B6A PDB:3J16
PDBsum:3J16 GO:GO:0022625 RefSeq:NP_011368.3 GeneID:852730
KEGG:sce:YGL147C KO:K02940 KO:K02835 RefSeq:NP_011372.3
GeneID:852734 KEGG:sce:YGL143C Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H
PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS PDBsum:3O58
PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I HOGENOM:HOG000039905
OMA:RDTRIFQ OrthoDB:EOG4RJK9X EMBL:Z72669 PIR:S19077
ProteinModelPortal:P05738 SMR:P05738 DIP:DIP-4826N IntAct:P05738
MINT:MINT-493534 STRING:P05738 PeptideAtlas:P05738
EnsemblFungi:YGL147C CYGD:YGL147c GeneTree:ENSGT00390000015224
EvolutionaryTrace:P05738 NextBio:972123 Genevestigator:P05738
GermOnline:YGL147C Uniprot:P05738
Length = 191
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 89/190 (46%), Positives = 127/190 (66%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFG 60
M+ I + Q +++P G+ +K+R V V GPRGTL ++ KH+ + VN +++KV G
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNG 60
Query: 61 TKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINC--VTSENNTLLEIRNFLGE 118
+K +AA+RTV S + NM+ GVTKG+ YKMR YAHFPIN V + +E+RNFLG+
Sbjct: 61 GRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGD 120
Query: 119 KYIRRVKMAPGVKVSNSKQ-KDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
K IR V + GV + S KDE+++ GN +E+VS++AA +QQ V+NKDIRKFLDG+Y
Sbjct: 121 KKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIY 180
Query: 178 VSEKTTVVTD 187
VS K + D
Sbjct: 181 VSHKGFITED 190
>UNIPROTKB|G3MWV9 [details] [associations]
symbol:G3MWV9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000702 InterPro:IPR020040 PIRSF:PIRSF002162
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
GeneTree:ENSGT00390000015224 EMBL:DAAA02053278
Ensembl:ENSBTAT00000009223 Uniprot:G3MWV9
Length = 178
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 88/187 (47%), Positives = 116/187 (62%)
Query: 4 IVSNQTVKIPRGLQCFVKARTV---TVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
I+SN T +P + A T+ TVKGPRGT RDF H+ + ++ K+ L+V+KW
Sbjct: 2 ILSNWTAGVPE-----ISAHTLKGCTVKGPRGTQWRDFNHIDVAFSLLGKKKKRLQVDKW 56
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
+ KKE+ V T+CS + NM+K VT GF YKMR+ AHFPI+ EN +L EI NF
Sbjct: 57 WRNKKELVTVCTICSRVQNMIKSVTLGFCYKMRSVRAHFPIDVAIQENGSLAEI-NFGDG 115
Query: 119 KYIRRVKMAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLY 177
KYI R +M+ + S + Q+DEL +EGN E VS SA+ +KDIRKFLDG+Y
Sbjct: 116 KYIHRGQMSLDMAYSVPQAQEDELSLEGNHTELVSDSAS---------HKDIRKFLDGIY 166
Query: 178 VSEKTTV 184
VSEK TV
Sbjct: 167 VSEKGTV 173
>UNIPROTKB|H0Y9R4 [details] [associations]
symbol:RPL9 "60S ribosomal protein L9" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR002359
InterPro:IPR020040 Pfam:PF00347 PROSITE:PS00700 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 Gene3D:3.90.930.12
PANTHER:PTHR11655 SUPFAM:SSF56053 HGNC:HGNC:10369 EMBL:AC021148
Ensembl:ENST00000506581 Uniprot:H0Y9R4
Length = 91
Score = 213 (80.0 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 47/60 (78%), Positives = 51/60 (85%)
Query: 126 MAPGVKVSNSK-QKDELIIEGNDIENVSRSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 184
M GV S S+ QKDELI+EGNDIE VS SAALIQQ+TTVKNKDIRKFLDG+YVSEK TV
Sbjct: 27 MIKGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 86
Score = 122 (48.0 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 53 LKVEKWFGTKKEIAAVRTVCSHISNMLKGV 82
L+V+KW+G +KE+A VRT+CSH+ NM+KGV
Sbjct: 2 LRVDKWWGNRKELATVRTICSHVQNMIKGV 31
>UNIPROTKB|F1M309 [details] [associations]
symbol:F1M309 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR020040 Pfam:PF00347
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
IPI:IPI00778956 Ensembl:ENSRNOT00000039259 Uniprot:F1M309
Length = 113
Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 44/93 (47%), Positives = 63/93 (67%)
Query: 20 VKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKEIAAVRTVCSHISNML 79
+K RTV VKGPRGTL RDF + +++ ++ K + G +KE+ VR+VC+ + N++
Sbjct: 23 LKGRTVIVKGPRGTLWRDFNRINVELRLLGKEKSVLTN--GNRKELVTVRSVCTRVQNVI 80
Query: 80 KGVTKGFLYKMRAAYAHFPINCVTSENNTLLEI 112
KGVT GF YK R+A HFPIN V EN +++EI
Sbjct: 81 KGVTLGFRYKTRSACVHFPINVVIQENGSVVEI 113
>RGD|1585598 [details] [associations]
symbol:LOC683597 "similar to ribosomal protein L9" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA] InterPro:IPR000702 InterPro:IPR020040 RGD:1585598
GO:GO:0005730 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0022625 Gene3D:3.90.930.12 PANTHER:PTHR11655
GeneTree:ENSGT00390000015224 IPI:IPI00388839
Ensembl:ENSRNOT00000030099 Uniprot:D3ZKV5
Length = 152
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 63/164 (38%), Positives = 90/164 (54%)
Query: 1 MRQIVSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRV--LKVEKW 58
MR I NQ VKIP A V VK RGTL+RDF H+ I++ ++ KR L+V+KW
Sbjct: 1 MRIIHINQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKW 54
Query: 59 FGTKKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGE 118
T K +A T+ SH+ NM+K V G +++ + P EN +L+EI NFLGE
Sbjct: 55 LKTMK-LATAHTIYSHVQNMIKRVD-GLVFQDVILVSSIPQQ---QENQSLVEISNFLGE 109
Query: 119 KYIRRVKMAPGVKVSNSKQKDELIIEGNDIENVSRSAALIQQST 162
KYI+ V+M V +L ++ DI VS S + +++T
Sbjct: 110 KYIQGVQMRTDVV-------RKLQVKNKDIREVSNSVYVSEKAT 146
>TIGR_CMR|CHY_2294 [details] [associations]
symbol:CHY_2294 "ribosomal protein L6" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000702 InterPro:IPR002358
InterPro:IPR019906 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PRINTS:PR00059 PROSITE:PS00525 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 eggNOG:COG0097 HOGENOM:HOG000039903 KO:K02933
OMA:INNMVVG Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
TIGRFAMs:TIGR03654 ProtClustDB:PRK05498 HAMAP:MF_01365_B
PANTHER:PTHR11655:SF6 RefSeq:YP_361103.1 HSSP:Q5SHQ3
ProteinModelPortal:Q3A9T1 SMR:Q3A9T1 STRING:Q3A9T1 GeneID:3726911
KEGG:chy:CHY_2294 PATRIC:21277659
BioCyc:CHYD246194:GJCN-2293-MONOMER Uniprot:Q3A9T1
Length = 182
Score = 131 (51.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 49/175 (28%), Positives = 85/175 (48%)
Query: 5 VSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKKE 64
+ + + +P+G++ V+ TVTVKGP+G+L R+F H + I ++L VE+ K+
Sbjct: 4 IGRKPIPVPQGVEVKVEGTTVTVKGPKGSLTREF-HPDMKITFDGSQIL-VERPSDEKEH 61
Query: 65 IAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRRV 124
A + I+NM+ GVT G+ + + + L+ L Y V
Sbjct: 62 KALHGLTRTLINNMIVGVTNGYQKSLELVGVGYR---AAKQGRKLV-----LTVGYSHPV 113
Query: 125 KMAP--GVKVSNSKQKDELIIEGNDIENVSRSAALIQ---QSTTVKNKDIRKFLD 174
+M P G+++ Q +++I++G D E V AA I+ + K K I K+ D
Sbjct: 114 EMDPPEGIEIEVPAQ-NQIIVKGIDKELVGNFAATIRAVREPEPYKGKGI-KYTD 166
>TIGR_CMR|SPO_0500 [details] [associations]
symbol:SPO_0500 "ribosomal protein L6" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR000702
InterPro:IPR002358 InterPro:IPR019906 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PRINTS:PR00059 PROSITE:PS00525
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0019843 eggNOG:COG0097 HOGENOM:HOG000039903
KO:K02933 OMA:INNMVVG Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 TIGRFAMs:TIGR03654 HSSP:P02391 ProtClustDB:PRK05498
HAMAP:MF_01365_B PANTHER:PTHR11655:SF6 RefSeq:YP_165762.1
ProteinModelPortal:Q5LW43 SMR:Q5LW43 GeneID:3195456
KEGG:sil:SPO0500 PATRIC:23374261 Uniprot:Q5LW43
Length = 177
Score = 124 (48.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 46/172 (26%), Positives = 85/172 (49%)
Query: 5 VSNQTVKIPRGLQCFVKARTVTVKGPRGTLK---RDFKHLAIDIHMVNKRVLKVEKWFGT 61
+ + V++P G+ V +T+ VKGP+G D + +D ++V+ + K
Sbjct: 4 IGKKPVELPSGVSAAVSGQTIEVKGPKGARSFTATDDVTITVDGNVVSITPRGMSK--RA 61
Query: 62 KKEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYI 121
+++ RT+ ++N++ GVT+GF ++ + N ++ NTL ++ LG +
Sbjct: 62 RQQWGMSRTM---VANLVAGVTEGFKKELEITGVGYRAN---AQGNTL-KLN--LGYSHD 112
Query: 122 RRVKMAPGVKVSNSKQKDELIIEGNDIENVSRSAALIQQSTT---VKNKDIR 170
+ GV VS KQ E+++EG D + V AA I++ + K K IR
Sbjct: 113 VDFTVPAGVTVSTPKQT-EIVVEGIDQQQVGEVAAKIREWRSPEPYKGKGIR 163
>UNIPROTKB|P46898 [details] [associations]
symbol:rplF "50S ribosomal protein L6" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000702 InterPro:IPR002358
InterPro:IPR019906 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PRINTS:PR00059 PROSITE:PS00525 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AL009126 GenomeReviews:AL009126_GR
GO:GO:0019843 eggNOG:COG0097 HOGENOM:HOG000039903 KO:K02933
OMA:INNMVVG Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
TIGRFAMs:TIGR03654 ProtClustDB:PRK05498 HAMAP:MF_01365_B
PANTHER:PTHR11655:SF6 EMBL:L47971 EMBL:D64125 PIR:B69695
RefSeq:NP_388012.1 ProteinModelPortal:P46898 SMR:P46898
EnsemblBacteria:EBBACT00000001337 GeneID:938229 KEGG:bsu:BSU01310
PATRIC:18971771 GenoList:BSU01310 BioCyc:BSUB:BSU01310-MONOMER
Uniprot:P46898
Length = 179
Score = 116 (45.9 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 49/172 (28%), Positives = 80/172 (46%)
Query: 5 VSNQTVKIPRGLQCFVKAR-TVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKK 63
V + ++IP + + TV VKGP+G L R F H ++I V VL V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 64 EIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRR 123
A T S + NM++GV+KGF + + + S N +L + G Y
Sbjct: 62 HRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYRAS--KSGNKLVLNV----G--YSHP 113
Query: 124 VKMAP--GVKVSNSKQKDELIIEGNDIENVSRSAA---LIQQSTTVKNKDIR 170
V++ P G+++ Q +++++G D E V AA ++ K K IR
Sbjct: 114 VEIVPEEGIEIEVPSQT-KVVVKGTDKERVGAIAANIRAVRSPEPYKGKGIR 164
>TIGR_CMR|CBU_0253 [details] [associations]
symbol:CBU_0253 "ribosomal protein L6" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR000702 InterPro:IPR002358
InterPro:IPR019906 InterPro:IPR020040 Pfam:PF00347
PIRSF:PIRSF002162 PRINTS:PR00059 PROSITE:PS00525 GO:GO:0006412
GO:GO:0005840 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
GO:GO:0019843 eggNOG:COG0097 HOGENOM:HOG000039903 KO:K02933
OMA:INNMVVG Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
TIGRFAMs:TIGR03654 HSSP:P02391 ProtClustDB:PRK05498
HAMAP:MF_01365_B PANTHER:PTHR11655:SF6 RefSeq:NP_819297.1
ProteinModelPortal:Q83ER1 SMR:Q83ER1 GeneID:1208134
KEGG:cbu:CBU_0253 PATRIC:17929199
BioCyc:CBUR227377:GJ7S-259-MONOMER Uniprot:Q83ER1
Length = 178
Score = 114 (45.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 45/171 (26%), Positives = 76/171 (44%)
Query: 5 VSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKV--EKWFGTK 62
V+ +KIP G++ V + +TVKG GTL R H A+ + + + + G+
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAELQTICANDSPGSN 63
Query: 63 KEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIR 122
R V ++NM++GV GF K+ + + N + G +
Sbjct: 64 ALAGTARAV---LANMVQGVHTGFQRKLVMVGVGYRAKAEGKKLNLTV------GLSHPV 114
Query: 123 RVKMAPGVKVSNSKQKDELIIEGNDIENVSRSAALIQQ---STTVKNKDIR 170
++M G+ V Q E+I++G D + VS+ AA I++ K K IR
Sbjct: 115 NIEMPEGITVETPSQT-EIIVKGADKQRVSQVAANIREIRPPEPYKGKGIR 164
>TIGR_CMR|BA_0125 [details] [associations]
symbol:BA_0125 "ribosomal protein L6" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000702 InterPro:IPR002358 InterPro:IPR019906
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PRINTS:PR00059
PROSITE:PS00525 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 eggNOG:COG0097 HOGENOM:HOG000039903 KO:K02933
OMA:INNMVVG Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
TIGRFAMs:TIGR03654 RefSeq:NP_842693.1 RefSeq:YP_016730.1
RefSeq:YP_026411.1 HSSP:P02391 ProteinModelPortal:Q81VR5 SMR:Q81VR5
DNASU:1087011 EnsemblBacteria:EBBACT00000009556
EnsemblBacteria:EBBACT00000015765 EnsemblBacteria:EBBACT00000024025
GeneID:1087011 GeneID:2818227 GeneID:2851257 KEGG:ban:BA_0125
KEGG:bar:GBAA_0125 KEGG:bat:BAS0125 ProtClustDB:PRK05498
BioCyc:BANT260799:GJAJ-136-MONOMER
BioCyc:BANT261594:GJ7F-138-MONOMER HAMAP:MF_01365_B
PANTHER:PTHR11655:SF6 Uniprot:Q81VR5
Length = 179
Score = 114 (45.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 48/172 (27%), Positives = 79/172 (45%)
Query: 5 VSNQTVKIPRGLQCFV-KARTVTVKGPRGTLKRDFKHLAIDIHMVNKRVLKVEKWFGTKK 63
+ + ++IP G+ V + TVTVKGP+G L R F A + + + L VE+ K+
Sbjct: 4 IGKKILEIPAGVTITVAEDNTVTVKGPKGELTRTFN--ADMLIKIEENTLTVERPSEQKE 61
Query: 64 EIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIRR 123
A T + I NM++GVT+GF + + + + L+ L Y
Sbjct: 62 HRALHGTTRALIGNMVEGVTEGFARGLELVGVGYRAQ---KQGDKLV-----LSVGYSHP 113
Query: 124 VKMAP--GVKVSNSKQKDELIIEGNDIENVSRSAA---LIQQSTTVKNKDIR 170
V+M P G++V +++I+G D + V AA ++ K K IR
Sbjct: 114 VEMTPEAGLEVE-VPAPTKIVIKGIDKQRVGEFAANIRAVRAPEPYKGKGIR 164
>TIGR_CMR|SO_0246 [details] [associations]
symbol:SO_0246 "ribosomal protein L6" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000702 InterPro:IPR002358 InterPro:IPR019906
InterPro:IPR020040 Pfam:PF00347 PIRSF:PIRSF002162 PRINTS:PR00059
PROSITE:PS00525 GO:GO:0006412 GO:GO:0005840 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0019843
eggNOG:COG0097 HOGENOM:HOG000039903 KO:K02933 OMA:INNMVVG
Gene3D:3.90.930.12 PANTHER:PTHR11655 SUPFAM:SSF56053
TIGRFAMs:TIGR03654 HSSP:P02391 ProtClustDB:PRK05498
HAMAP:MF_01365_B PANTHER:PTHR11655:SF6 RefSeq:NP_715886.1
ProteinModelPortal:Q8EK54 SMR:Q8EK54 GeneID:1168129
KEGG:son:SO_0246 PATRIC:23520185 Uniprot:Q8EK54
Length = 177
Score = 110 (43.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 40/157 (25%), Positives = 78/157 (49%)
Query: 5 VSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKHLAIDIHMVNK--RVLKVEKWFGTK 62
V+ V IP G++ + +T+TVKG +G+L R + A+++ + N + L VE G
Sbjct: 4 VAKAPVSIPAGVEVTLNEQTLTVKGAKGSLTRVINN-AVNVVIENGVIKFLPVEGAVGAW 62
Query: 63 KEIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNFLGEKYIR 122
+ R + ++NM+ GV++GF K++ + V ++ +++ LG +
Sbjct: 63 AQAGTTRAL---VNNMVVGVSQGFERKLKLVGVGYRAKLVGAD----IDLT--LGFSHPL 113
Query: 123 RVKMAPGVKVSNSKQKDELIIEGNDIENVSRSAALIQ 159
K+ GV Q D +++ G D + + + AA I+
Sbjct: 114 VHKLPAGVTAECPSQTD-IVLRGVDKQLIGQVAAEIR 149
>TIGR_CMR|GSU_2842 [details] [associations]
symbol:GSU_2842 "ribosomal protein L6" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR000702
InterPro:IPR002358 InterPro:IPR019906 InterPro:IPR020040
Pfam:PF00347 PIRSF:PIRSF002162 PRINTS:PR00059 PROSITE:PS00525
GO:GO:0006412 GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0003735 GO:GO:0019843 eggNOG:COG0097 HOGENOM:HOG000039903
KO:K02933 OMA:INNMVVG Gene3D:3.90.930.12 PANTHER:PTHR11655
SUPFAM:SSF56053 TIGRFAMs:TIGR03654 HSSP:P02391 ProtClustDB:PRK05498
HAMAP:MF_01365_B PANTHER:PTHR11655:SF6 RefSeq:NP_953885.1
ProteinModelPortal:Q749A2 GeneID:2687150 KEGG:gsu:GSU2842
PATRIC:22028531 BioCyc:GSUL243231:GH27-2808-MONOMER Uniprot:Q749A2
Length = 179
Score = 106 (42.4 bits), Expect = 0.00020, P = 0.00020
Identities = 40/157 (25%), Positives = 74/157 (47%)
Query: 5 VSNQTVKIPRGLQCFVKARTVTVKGPRGTLKRDFKH-LAIDIHMVNKRVLKVEKWFGTKK 63
+ + ++IP G++ +T++GP+G L R ++++I + V + + +
Sbjct: 4 IGKRPIEIPSGVKVEFSDSVLTIEGPKGKLSRQVMDGVSLEITPSSIEVKRADDGLKARS 63
Query: 64 EIAAVRTVCSHISNMLKGVTKGFLYKMRAAYAHFPINCVTSENNTLLEIRNF-LGEKYIR 122
RT+ ++NM+ GVTKGF RA IN V ++ N LG +
Sbjct: 64 AHGLTRTL---VNNMVVGVTKGF---ERA----LEINGVGYRAEAKGDVLNLSLGYSHPI 113
Query: 123 RVKMAPGVKVSNSKQKDELIIEGNDIENVSRSAALIQ 159
+ G+ V K +L+++G D E V ++AA I+
Sbjct: 114 NYALPAGIIVEVDKMT-KLVVKGIDKELVGQTAAKIR 149
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 189 189 0.00089 110 3 11 22 0.42 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 50
No. of states in DFA: 594 (63 KB)
Total size of DFA: 144 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.38u 0.09s 17.47t Elapsed: 00:00:09
Total cpu time: 17.39u 0.09s 17.48t Elapsed: 00:00:09
Start: Thu Aug 15 13:56:09 2013 End: Thu Aug 15 13:56:18 2013