BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy763
(303 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 208 bits (530), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 93/133 (69%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ LKHPNLVNLLEVFRRK++LHLVFE+CDHTVL+EL+ + G+P L+K ITWQ L+ V+
Sbjct: 57 KQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVN 116
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI-NPGENYTDYVATRWYRAPELLVG 147
+CH+H CIHRD+KPENIL+T + V+KLCDFGFARL+ P + Y D VATRWYR+PELLVG
Sbjct: 117 FCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG 176
Query: 148 DTLYGPAVDVWAI 160
DT YGP VDVWAI
Sbjct: 177 DTQYGPPVDVWAI 189
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 107/133 (80%), Gaps = 1/133 (0%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L+H NLVNLLEV ++KK+ +LVFEF DHT+L++LE P+GL + ++++ +Q++ G+
Sbjct: 79 KQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIG 138
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFAR-LINPGENYTDYVATRWYRAPELLVG 147
+CH H IHRDIKPENIL++ +GVVKLCDFGFAR L PGE Y D VATRWYRAPELLVG
Sbjct: 139 FCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVG 198
Query: 148 DTLYGPAVDVWAI 160
D YG AVDVWAI
Sbjct: 199 DVKYGKAVDVWAI 211
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P YT V T WYRAPE+L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 177 GXKYYSTAVDIWSL 190
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
S+CH H +HRD+KP+N+L+ G +KL DFG AR P YT V T WYRAPE+L+
Sbjct: 117 SFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 177 GCKYYSTAVDIWSL 190
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 64 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P YT V T WYRAPE+L+
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 184 GXKYYSTAVDIWSL 197
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P YT V T WYRAPE+L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 177 GCKYYSTAVDIWSL 190
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P YT V T WYRAPE+L+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 176 GCKYYSTAVDIWSL 189
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P YT V T WYRAPE+L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 177 GCKYYSTAVDIWSL 190
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P YT V T WYRAPE+L+
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 177
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 178 GCKYYSTAVDIWSL 191
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P YT V T WYRAPE+L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 177 GCKYYSTAVDIWSL 190
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P YT V T WYRAPE+L+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 176 GCKYYSTAVDIWSL 189
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + + ++ G+P LIK +Q+L+G+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KPEN+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 117 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 177 GCKYYSTAVDIWSL 190
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P YT V T WYRAPE+L+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 176 GCKYYSTAVDIWSL 189
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 64 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P YT V T WYRAPE+L+
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 184 GCKYYSTAVDIWSL 197
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 61 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P YT V T WYRAPE+L+
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 180
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 181 GCKYYSTAVDIWSL 194
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KPEN+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 178 GCKYYSTAVDIWSL 191
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KPEN+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 178 GCKYYSTAVDIWSL 191
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KPEN+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 119 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 179 GCKYYSTAVDIWSL 192
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KPEN+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 120 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 180 GCKYYSTAVDIWSL 193
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 89/133 (66%), Gaps = 1/133 (0%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L HPN+V+L++V ++ L LVFEF + + L+ + GL IK +Q+LRGV+
Sbjct: 74 KELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
+CH+H +HRD+KP+N+L+ ++G +KL DFG AR P +YT V T WYRAP++L+G
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 148 DTLYGPAVDVWAI 160
Y +VD+W+I
Sbjct: 194 SKKYSTSVDIWSI 206
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 89/133 (66%), Gaps = 1/133 (0%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L HPN+V+L++V ++ L LVFEF + + L+ + GL IK +Q+LRGV+
Sbjct: 74 KELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVA 133
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
+CH+H +HRD+KP+N+L+ ++G +KL DFG AR P +YT V T WYRAP++L+G
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG 193
Query: 148 DTLYGPAVDVWAI 160
Y +VD+W+I
Sbjct: 194 SKKYSTSVDIWSI 206
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + + ++ G+P LIK +Q+L+G+
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 179 GCKYYSTAVDIWSL 192
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + + ++ G+P LIK +Q+L+G+
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 180 GCKYYSTAVDIWSL 193
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 177 GCKYYSTAVDIWSL 190
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 177 GCKYYSTAVDIWSL 190
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 177 GCKYYSTAVDIWSL 190
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 85/141 (60%), Gaps = 16/141 (11%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFE--------FCDHTVLNELENHPHGLPWDLIKQIT 80
+ L HPN+V LL+V + KL+LVFE F D + L G+P LIK
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALT-------GIPLPLIKSYL 108
Query: 81 WQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWY 139
+Q+L+G+++CH H +HRD+KP+N+L+ G +KL DFG AR P YT V T WY
Sbjct: 109 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 140 RAPELLVGDTLYGPAVDVWAI 160
RAPE+L+G Y AVD+W++
Sbjct: 169 RAPEILLGCKYYSTAVDIWSL 189
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 177 GCKYYSTAVDIWSL 190
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 180 GCKYYSTAVDIWSL 193
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 178 GCKYYSTAVDIWSL 191
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFE D + ++ G+P LIK +Q+L+G+
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 180 GCKYYSTAVDIWSL 193
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 176 GCKYYSTAVDIWSL 189
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 61 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 180
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 181 GCKYYSTAVDIWSL 194
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 178 GCKYYSTAVDIWSL 191
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 176 GCKYYSTAVDIWSL 189
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 179 GCKYYSTAVDIWSL 192
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 180 GCKYYSTAVDIWSL 193
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 179 GCKYYSTAVDIWSL 192
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP-HGLPWDLIKQITWQVLRGV 87
+ L HPN+V LL+V + KL+LVFEF + ++ G+P LIK +Q+L+G+
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLV 146
++CH H +HRD+KP+N+L+ G +KL DFG AR P Y V T WYRAPE+L+
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 147 GDTLYGPAVDVWAI 160
G Y AVD+W++
Sbjct: 180 GCKYYSTAVDIWSL 193
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 86/137 (62%), Gaps = 6/137 (4%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELE-----NHPHGLPWDLIKQITWQV 83
+ LKH N+V L +V + KL LVFEF D+ + ++ N P GL +L+K WQ+
Sbjct: 58 KELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117
Query: 84 LRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAP 142
L+G+++CH + +HRD+KP+N+L+ G +KL DFG AR P ++ V T WYRAP
Sbjct: 118 LQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAP 177
Query: 143 ELLVGDTLYGPAVDVWA 159
++L+G Y ++D+W+
Sbjct: 178 DVLMGSRTYSTSIDIWS 194
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 7/150 (4%)
Query: 18 QATEATNKKEKRSLK------HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGL 71
+A + N+ R +K HPN++ LL+ F K + LVF+F + + ++++ L
Sbjct: 50 EAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVL 109
Query: 72 PWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI-NPGENY 130
IK L+G+ Y H+H +HRD+KP N+LL NGV+KL DFG A+ +P Y
Sbjct: 110 TPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY 169
Query: 131 TDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
V TRWYRAPELL G +YG VD+WA+
Sbjct: 170 XHQVVTRWYRAPELLFGARMYGVGVDMWAV 199
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ LKH N+V L +V KKL LVFEFCD + ++ L +++K +Q+L+G+
Sbjct: 56 KELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
+CH +HRD+KP+N+L+ NG +KL DFG AR P Y+ V T WYR P++L G
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 148 DTLYGPAVDVWA 159
LY ++D+W+
Sbjct: 176 AKLYSTSIDMWS 187
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 86/137 (62%), Gaps = 7/137 (5%)
Query: 30 SLKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPH-GLPWDLIKQITWQV 83
+ +HPN+V L +V R+ KL LVFE D + L+ P G+P + IK + +Q+
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 84 LRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPE 143
LRG+ + H H +HRD+KP+NIL+T++G +KL DFG AR+ + T V T WYRAPE
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 144 LLVGDTLYGPAVDVWAI 160
+L+ + Y VD+W++
Sbjct: 190 VLLQSS-YATPVDLWSV 205
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 86/137 (62%), Gaps = 7/137 (5%)
Query: 30 SLKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPH-GLPWDLIKQITWQV 83
+ +HPN+V L +V R+ KL LVFE D + L+ P G+P + IK + +Q+
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 84 LRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPE 143
LRG+ + H H +HRD+KP+NIL+T++G +KL DFG AR+ + T V T WYRAPE
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 144 LLVGDTLYGPAVDVWAI 160
+L+ + Y VD+W++
Sbjct: 190 VLLQSS-YATPVDLWSV 205
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 86/137 (62%), Gaps = 7/137 (5%)
Query: 30 SLKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPH-GLPWDLIKQITWQV 83
+ +HPN+V L +V R+ KL LVFE D + L+ P G+P + IK + +Q+
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 84 LRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPE 143
LRG+ + H H +HRD+KP+NIL+T++G +KL DFG AR+ + T V T WYRAPE
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPE 189
Query: 144 LLVGDTLYGPAVDVWAI 160
+L+ + Y VD+W++
Sbjct: 190 VLLQSS-YATPVDLWSV 205
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 13/142 (9%)
Query: 31 LKHPNLVNLLEVFRRKKK--------LHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
LKH N+VNL+E+ R K ++LVF+FC+H + L N IK++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 133
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN-----YTDYVATR 137
+L G+ Y HR+ +HRD+K N+L+T +GV+KL DFG AR + +N Y + V T
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 138 WYRAPELLVGDTLYGPAVDVWA 159
WYR PELL+G+ YGP +D+W
Sbjct: 194 WYRPPELLLGERDYGPPIDLWG 215
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 13/142 (9%)
Query: 31 LKHPNLVNLLEVFRRKKK--------LHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
LKH N+VNL+E+ R K ++LVF+FC+H + L N IK++
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 132
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN-----YTDYVATR 137
+L G+ Y HR+ +HRD+K N+L+T +GV+KL DFG AR + +N Y + V T
Sbjct: 133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 192
Query: 138 WYRAPELLVGDTLYGPAVDVWA 159
WYR PELL+G+ YGP +D+W
Sbjct: 193 WYRPPELLLGERDYGPPIDLWG 214
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 13/142 (9%)
Query: 31 LKHPNLVNLLEVFRRKKK--------LHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
LKH N+VNL+E+ R K ++LVF+FC+H + L N IK++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 133
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN-----YTDYVATR 137
+L G+ Y HR+ +HRD+K N+L+T +GV+KL DFG AR + +N Y + V T
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 138 WYRAPELLVGDTLYGPAVDVWA 159
WYR PELL+G+ YGP +D+W
Sbjct: 194 WYRPPELLLGERDYGPPIDLWG 215
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 13/142 (9%)
Query: 31 LKHPNLVNLLEVFRRKKK--------LHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
LKH N+VNL+E+ R K ++LVF+FC+H + L N IK++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 133
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN-----YTDYVATR 137
+L G+ Y HR+ +HRD+K N+L+T +GV+KL DFG AR + +N Y + V T
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 138 WYRAPELLVGDTLYGPAVDVWA 159
WYR PELL+G+ YGP +D+W
Sbjct: 194 WYRPPELLLGERDYGPPIDLWG 215
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ LKH N+V L +V KKL LVFEFCD + ++ L +++K +Q+L+G+
Sbjct: 56 KELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
+CH +HRD+KP+N+L+ NG +KL +FG AR P Y+ V T WYR P++L G
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 148 DTLYGPAVDVWA 159
LY ++D+W+
Sbjct: 176 AKLYSTSIDMWS 187
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 83/133 (62%), Gaps = 1/133 (0%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ LKH N+V L ++ +K L LVFE+ D + L++ + + +K +Q+LRG++
Sbjct: 55 KDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLA 114
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
YCHR +HRD+KP+N+L+ G +KL DFG AR + P + Y + V T WYR P++L+G
Sbjct: 115 YCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 148 DTLYGPAVDVWAI 160
T Y +D+W +
Sbjct: 175 STDYSTQIDMWGV 187
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 84/137 (61%), Gaps = 7/137 (5%)
Query: 30 SLKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELEN-HPHGLPWDLIKQITWQV 83
+ +HPN+V L++V R+ K+ LVFE D + L+ P GLP + IK + Q
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 84 LRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPE 143
LRG+ + H + +HRD+KPENIL+T+ G VKL DFG AR+ + T V T WYRAPE
Sbjct: 130 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPE 189
Query: 144 LLVGDTLYGPAVDVWAI 160
+L+ T Y VD+W++
Sbjct: 190 VLLQST-YATPVDMWSV 205
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ LKH N+V L +V KK+L LVFE D + L+ GL K Q+L G++
Sbjct: 55 KELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
YCH +HRD+KP+N+L+ G +K+ DFG AR P YT V T WYRAP++L+G
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 148 DTLYGPAVDVWAI 160
Y +D+W++
Sbjct: 175 SKKYSTTIDIWSV 187
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ LKH N+V L +V KK+L LVFE D + L+ GL K Q+L G++
Sbjct: 55 KELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
YCH +HRD+KP+N+L+ G +K+ DFG AR P YT V T WYRAP++L+G
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 148 DTLYGPAVDVWAI 160
Y +D+W++
Sbjct: 175 SKKYSTTIDIWSV 187
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ LKH N+V L +V KK+L LVFE D + L+ GL K Q+L G++
Sbjct: 55 KELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
YCH +HRD+KP+N+L+ G +K+ DFG AR P YT + T WYRAP++L+G
Sbjct: 115 YCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 148 DTLYGPAVDVWAI 160
Y +D+W++
Sbjct: 175 SKKYSTTIDIWSV 187
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 83/137 (60%), Gaps = 7/137 (5%)
Query: 30 SLKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELEN-HPHGLPWDLIKQITWQV 83
+ +HPN+V L++V R+ K+ LVFE D + L+ P GLP + IK + Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 84 LRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPE 143
LRG+ + H + +HRD+KPENIL+T+ G VKL DFG AR+ + V T WYRAPE
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPE 181
Query: 144 LLVGDTLYGPAVDVWAI 160
+L+ T Y VD+W++
Sbjct: 182 VLLQST-YATPVDMWSV 197
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 83/137 (60%), Gaps = 7/137 (5%)
Query: 30 SLKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELEN-HPHGLPWDLIKQITWQV 83
+ +HPN+V L++V R+ K+ LVFE D + L+ P GLP + IK + Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 84 LRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPE 143
LRG+ + H + +HRD+KPENIL+T+ G VKL DFG AR+ + V T WYRAPE
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPE 181
Query: 144 LLVGDTLYGPAVDVWAI 160
+L+ T Y VD+W++
Sbjct: 182 VLLQST-YATPVDMWSV 197
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 83/137 (60%), Gaps = 7/137 (5%)
Query: 30 SLKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELEN-HPHGLPWDLIKQITWQV 83
+ +HPN+V L++V R+ K+ LVFE D + L+ P GLP + IK + Q
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 84 LRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPE 143
LRG+ + H + +HRD+KPENIL+T+ G VKL DFG AR+ + V T WYRAPE
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPE 181
Query: 144 LLVGDTLYGPAVDVWAI 160
+L+ T Y VD+W++
Sbjct: 182 VLLQST-YATPVDMWSV 197
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 18/150 (12%)
Query: 29 RSLKHPNLVNLLEVF--RRKKKLHLVFEFCDHTVLNELENH--------PHGLPWDLIKQ 78
R LKHPN+++L +VF +K+ L+F++ +H + + ++ H P LP ++K
Sbjct: 73 RELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKS 132
Query: 79 ITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCDFGFARLIN----PGENY 130
+ +Q+L G+ Y H + +HRD+KP NIL+ G VK+ D GFARL N P +
Sbjct: 133 LLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL 192
Query: 131 TDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
V T WYRAPELL+G Y A+D+WAI
Sbjct: 193 DPVVVTFWYRAPELLLGARHYTKAIDIWAI 222
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 84/138 (60%), Gaps = 7/138 (5%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L+H N++ L V +LHL+FE+ ++ + ++ +P + +IK +Q++ GV+
Sbjct: 88 KELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNP-DVSMRVIKSFLYQLINGVN 146
Query: 89 YCHRHACIHRDIKPENILLTANG-----VVKLCDFGFARLIN-PGENYTDYVATRWYRAP 142
+CH C+HRD+KP+N+LL+ + V+K+ DFG AR P +T + T WYR P
Sbjct: 147 FCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPP 206
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+L+G Y +VD+W+I
Sbjct: 207 EILLGSRHYSTSVDIWSI 224
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 82/141 (58%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHP---HGLPWDLIKQI 79
R +KHPN+V+L F + + L+LV E+ TV ++ +P LIK
Sbjct: 87 RIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLY 146
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILL-TANGVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+LR ++Y H HRDIKP+N+LL +GV+KL DFG A+++ GE + +R+
Sbjct: 147 MYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY 206
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y +D+W+
Sbjct: 207 YRAPELIFGATNYTTNIDIWS 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 84/140 (60%), Gaps = 11/140 (7%)
Query: 30 SLKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVL 84
+ +H N++ + ++ R + K +++V + + T L +L H L D I +Q+L
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQIL 136
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYR 140
RG+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYR
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 141 APELLVGDTLYGPAVDVWAI 160
APE+++ Y ++D+W++
Sbjct: 197 APEIMLNSKGYTKSIDIWSV 216
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSV 209
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 23/148 (15%)
Query: 25 KKEKRSLK---HPNLVNLLEVFRRKKKLHLVFEF----------CDHTVLNELENHPHGL 71
K+E ++LK HP+++ L +V +V E+ C H + E+E
Sbjct: 59 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA----- 113
Query: 72 PWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
+++ Q+L V YCHRH +HRD+KPEN+LL A+ K+ DFG + +++ GE
Sbjct: 114 -----RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 168
Query: 132 DYVATRWYRAPELLVGDTLYGPAVDVWA 159
D + Y APE++ G GP VD+W+
Sbjct: 169 DSCGSPNYAAPEVISGRLYAGPEVDIWS 196
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 54 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 110
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 111 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSEL 170
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 171 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 215
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 50 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 106
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 107 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSEL 166
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 167 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 211
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 80/143 (55%), Gaps = 13/143 (9%)
Query: 31 LKHPNLVNLLEVF-------RRKKKLHLVFEFCDHTVLNELENHPH---GLPWDLIKQIT 80
L HPN+V L F RR L++V E+ T+ N+ P LIK
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFL 135
Query: 81 WQVLRGVSYCHRHAC--IHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATR 137
+Q++R + H + HRDIKP N+L+ A+G +KLCDFG A+ ++P E Y+ +R
Sbjct: 136 FQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSR 195
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
+YRAPEL+ G+ Y AVD+W++
Sbjct: 196 YYRAPELIFGNQHYTTAVDIWSV 218
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 84/140 (60%), Gaps = 11/140 (7%)
Query: 30 SLKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVL 84
+ +H N++ + ++ R + K +++V + + T L +L H L D I +Q+L
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQIL 136
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYR 140
RG+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYR
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 141 APELLVGDTLYGPAVDVWAI 160
APE+++ Y ++D+W++
Sbjct: 197 APEIMLNSKGYTKSIDIWSV 216
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 135
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 196 PEIMLNSKGYTKSIDIWSV 214
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 94/169 (55%), Gaps = 12/169 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFR-----RKKKLHLVFEF 55
+R KK S + + Q T K R +H N++ + ++ R + K +++V +
Sbjct: 53 VRVAIKKISPFEHQTYXQRTLREIKILLR-FRHENIIGINDIIRAPTIEQMKDVYIVQDL 111
Query: 56 CDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKL 115
+ T L +L H L D I +Q+LRG+ Y H +HRD+KP N+LL +K+
Sbjct: 112 ME-TDLYKLLKTQH-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 169
Query: 116 CDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
CDFG AR+ +P ++ T+YVATRWYRAPE+++ Y ++D+W++
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 218
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 55 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 111
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 112 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 171
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 172 KILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 216
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 59 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 115
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 116 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXEL 175
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 176 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 220
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 139
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 200 PEIMLNSKGYTKSIDIWSV 218
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 135
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 196 PEIMLNSKGYTKSIDIWSV 214
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 55 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 111
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 112 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 171
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 172 KILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 216
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 55 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 111
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 112 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 171
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 172 KILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 216
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + + L+LV ++ TV ++ LP +K
Sbjct: 96 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 155
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE Y+ +R+
Sbjct: 156 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 215
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 216 YRAPELIFGATDYTSSIDVWS 236
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
Query: 45 RKKKLHLVFEFCD---HTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIK 101
+ K L+++ E+ H VL +P +LI +Q+ R V + H HRDIK
Sbjct: 109 QNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIK 168
Query: 102 PENILLTA-NGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
P+N+L+ + + +KLCDFG A+ + P E + +R+YRAPEL++G T Y P++D+W+I
Sbjct: 169 PQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSI 228
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 53 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 109
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 110 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXEL 169
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 170 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 214
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKK------LHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + L+LV ++ TV ++ LP +K
Sbjct: 147 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 206
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE Y+ +R+
Sbjct: 207 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 266
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 267 YRAPELIFGATDYTSSIDVWS 287
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 86 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 143
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 144 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 203
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 204 PEIMLNSKGYTKSIDIWSV 222
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 135
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 196 PEIMLNSKGYTKSIDIWSV 214
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKK------LHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + L+LV ++ TV ++ LP +K
Sbjct: 104 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 163
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE Y+ +R+
Sbjct: 164 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 223
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 224 YRAPELIFGATDYTSSIDVWS 244
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 53 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 109
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 110 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXEL 169
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 170 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 214
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKK------LHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + L+LV ++ TV ++ LP +K
Sbjct: 102 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 161
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE Y+ +R+
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 221
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 222 YRAPELIFGATDYTSSIDVWS 242
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 60 LRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 116
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 117 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 176
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 177 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 60 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 116
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 117 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 176
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 177 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 221
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 60 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 116
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 117 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 176
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 177 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 221
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 80 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 137
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 198 PEIMLNSKGYTKSIDIWSV 216
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 139
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 200 PEIMLNSKGYTKSIDIWSV 218
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 83 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 140
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 200
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 201 PEIMLNSKGYTKSIDIWSV 219
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 84 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 141
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 142 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 201
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 202 PEIMLNSKGYTKSIDIWSV 220
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 75 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 132
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 133 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 192
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 193 PEIMLNSKGYTKSIDIWSV 211
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + + L+LV ++ TV ++ LP +K
Sbjct: 81 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 140
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE Y+ +R+
Sbjct: 141 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 200
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 201 YRAPELIFGATDYTSSIDVWS 221
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 98 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 155
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 216 PEIMLNSKGYTKSIDIWSV 234
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 139
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 200 PEIMLNSKGYTKSIDIWSV 218
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + + L+LV ++ TV ++ LP +K
Sbjct: 73 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 132
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE Y+ +R+
Sbjct: 133 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 192
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 193 YRAPELIFGATDYTSSIDVWS 213
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKK------LHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + L+LV ++ TV ++ LP +K
Sbjct: 106 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 165
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE Y+ +R+
Sbjct: 166 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 225
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 226 YRAPELIFGATDYTSSIDVWS 246
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 53 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 109
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 110 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 169
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 170 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 214
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 76 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 133
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 194 PEIMLNSKGYTKSIDIWSV 212
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 135
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 196 PEIMLNSKGYTKSIDIWSV 214
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 76 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 133
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 194 PEIMLNSKGYTKSIDIWSV 212
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + + L+LV ++ TV ++ LP +K
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE Y+ +R+
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 188 YRAPELIFGATDYTSSIDVWS 208
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 59 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 115
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 116 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 175
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 176 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 220
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 71 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 127
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 128 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 187
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 188 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 50 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 106
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 107 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 166
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 167 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 211
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + + L+LV ++ TV ++ LP +K
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE Y+ +R+
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 188 YRAPELIFGATDYTSSIDVWS 208
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + + L+LV ++ TV ++ LP +K
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE Y+ +R+
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 188 YRAPELIFGATDYTSSIDVWS 208
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 50 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 106
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 107 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 166
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 167 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 211
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 54 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 110
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 111 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 170
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 171 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 215
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 50 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 106
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 107 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 166
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 167 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 211
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 53 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 109
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 110 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 169
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 170 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 214
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 47 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 103
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 104 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 163
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 164 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 208
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 45 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 101
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 102 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 161
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 162 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 206
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 55 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 111
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 112 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 171
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 172 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 216
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG R + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDFGLCR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 68 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 124
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 125 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 184
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 185 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 229
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 67 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 123
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 124 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 183
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 184 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 228
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 79/139 (56%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K ++LV + L+ L D I +Q+LR
Sbjct: 98 FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILR 155
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 216 PEIMLNSKGYTKSIDIWSV 234
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 44 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 100
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 101 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 160
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 161 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 205
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 46 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 102
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 103 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 162
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 163 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 207
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 45 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 101
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 102 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 161
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 162 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 206
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKCQH-LSNDHICYFLYQILR 139
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++ T+YVATRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 200 PEIMLNSKGYTKSIDIWSV 218
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 54 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 110
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 111 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 170
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 171 KILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 215
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 88/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ D+G AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDYGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 20/139 (14%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEF----------CDHTVLNELENHPHGLPWDLIKQIT 80
+HP+++ L +V + +V E+ C + L+E E+ +++
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKES----------RRLF 122
Query: 81 WQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYR 140
Q+L GV YCHRH +HRD+KPEN+LL A+ K+ DFG + +++ GE + Y
Sbjct: 123 QQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYA 182
Query: 141 APELLVGDTLYGPAVDVWA 159
APE++ G GP VD+W+
Sbjct: 183 APEVISGRLYAGPEVDIWS 201
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGV 87
+ L HPN+V L EV +K L+LV E+ V + L H + + Q++ V
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAV 126
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
YCH+ +HRD+K EN+LL A+ +K+ DFGF+ G ++ + Y APEL G
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQG 186
Query: 148 DTLYGPAVDVWAI 160
GP VDVW++
Sbjct: 187 KKYDGPEVDVWSL 199
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+SL HPN++ L E F ++LV E C L E H +I VL V+
Sbjct: 78 KSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVA 137
Query: 89 YCHRHACIHRDIKPENILL---TANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELL 145
YCH+ HRD+KPEN L + + +KL DFG A PG+ V T +Y +P++L
Sbjct: 138 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL 197
Query: 146 VGDTLYGPAVDVWA 159
G LYGP D W+
Sbjct: 198 EG--LYGPECDEWS 209
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 23/148 (15%)
Query: 25 KKEKRSLK---HPNLVNLLEVFRRKKKLHLVFEF----------CDHTVLNELENHPHGL 71
K+E ++LK HP+++ L +V +V E+ C H + E+E
Sbjct: 59 KREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA----- 113
Query: 72 PWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
+++ Q+L V YCHRH +HRD+KPEN+LL A+ K+ DFG + +++ GE
Sbjct: 114 -----RRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR 168
Query: 132 DYVATRWYRAPELLVGDTLYGPAVDVWA 159
+ Y APE++ G GP VD+W+
Sbjct: 169 TSCGSPNYAAPEVISGRLYAGPEVDIWS 196
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD---- 57
R KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYLV 105
Query: 58 -HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 115 LCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 166 ILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD---- 57
R KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 69 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYLV 125
Query: 58 -HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +K
Sbjct: 126 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 185
Query: 115 LCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 186 ILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 229
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD---- 57
R KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 59 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYLV 115
Query: 58 -HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +K
Sbjct: 116 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 175
Query: 115 LCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 176 ILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 219
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 68/134 (50%), Gaps = 5/134 (3%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+SL HPN++ L E F ++LV E C L E H +I VL V+
Sbjct: 61 KSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVA 120
Query: 89 YCHRHACIHRDIKPENILL---TANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELL 145
YCH+ HRD+KPEN L + + +KL DFG A PG+ V T +Y +P++L
Sbjct: 121 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL 180
Query: 146 VGDTLYGPAVDVWA 159
G LYGP D W+
Sbjct: 181 EG--LYGPECDEWS 192
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 71 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 127
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 128 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 187
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + YVATRWYRAPE+++ Y VD+W++
Sbjct: 188 KILDFGLAR--HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSV 232
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD---- 57
R KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 68 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYLV 124
Query: 58 -HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +K
Sbjct: 125 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 184
Query: 115 LCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 185 ILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 228
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD---- 57
R KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 45 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYLV 101
Query: 58 -HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +K
Sbjct: 102 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161
Query: 115 LCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 162 ILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 205
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 112/217 (51%), Gaps = 31/217 (14%)
Query: 31 LKHPNLVNLLEVFRRK-----KKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + +++V + + + L++ L D I +Q+LR
Sbjct: 98 FRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQ--QLSNDHICYFLYQILR 155
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDY----VATRWYRA 141
G+ Y H +HRD+KP N+L+ +K+CDFG AR+ +P ++T + VATRWYRA
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRA 215
Query: 142 PELLVGDTLYGPAVDVWAI-----EWTS--------HSYSQIGFIGLGNMGSHMARNLLK 188
PE+++ Y ++D+W++ E S H Q+ I LG +GS +L
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-LGILGSPSQEDL-- 272
Query: 189 NNGRVTVILKS--DSLDSETWDLTWQEIFSKTSTTTI 223
N + + ++ SL S+T + W ++F K+ + +
Sbjct: 273 -NCIINMKARNYLQSLPSKT-KVAWAKLFPKSDSKAL 307
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD---- 57
R KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 55 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYLV 111
Query: 58 -HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +K
Sbjct: 112 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 171
Query: 115 LCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 172 ILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 215
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 6/136 (4%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL--NELEN--HPHGLPWDLIKQITWQVL 84
+ LKH N++ LL+VF + E T L +L N L + ++ + +Q+L
Sbjct: 82 KHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLL 141
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPEL 144
RG+ Y H IHRD+KP N+ + + +++ DFG AR + E T YVATRWYRAPE+
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQAD--EEMTGYVATRWYRAPEI 199
Query: 145 LVGDTLYGPAVDVWAI 160
++ Y VD+W++
Sbjct: 200 MLNWMHYNQTVDIWSV 215
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 69/131 (52%), Gaps = 2/131 (1%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGVSY 89
L HPN+V L EV +K L+L+ E+ V + L H + + Q++ V Y
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR-MKEKEARSKFRQIVSAVQY 126
Query: 90 CHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDT 149
CH+ +HRD+K EN+LL A+ +K+ DFGF+ G + + Y APEL G
Sbjct: 127 CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKK 186
Query: 150 LYGPAVDVWAI 160
GP VDVW++
Sbjct: 187 YDGPEVDVWSL 197
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 82/139 (58%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 82 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 139
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDY----VATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++T + VATRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 199
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 200 PEIMLNSKGYTKSIDIWSV 218
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 82/139 (58%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 83 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 140
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDY----VATRWYRA 141
G+ Y H +HRD+KP N+LL +K+CDFG AR+ +P ++T + VATRWYRA
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 200
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 201 PEIMLNSKGYTKSIDIWSV 219
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 34/156 (21%)
Query: 33 HPNLVNLLEVFR--RKKKLHLVFEFCD---HTVLNELENHPHGLPWDLIKQ-ITWQVLRG 86
H N+VNLL V R + ++LVF++ + H V+ P + KQ + +Q+++
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEP------VHKQYVVYQLIKV 121
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL--------------INPG-ENY- 130
+ Y H +HRD+KP NILL A VK+ DFG +R IN EN+
Sbjct: 122 IKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 131 ------TDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
TDYVATRWYRAPE+L+G T Y +D+W++
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSL 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGV 87
+ L HPN+V L EV +K L+LV E+ V + L H + + Q++ V
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAV 126
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
YCH+ +HRD+K EN+LL A+ +K+ DFGF+ G + + Y APEL G
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQG 186
Query: 148 DTLYGPAVDVWAI 160
GP VDVW++
Sbjct: 187 KKYDGPEVDVWSL 199
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R L+HP+++ L +V + K ++ +V E+ + + + + + ++ Q++ V
Sbjct: 69 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR-DKMSEQEARRFFQQIISAVE 127
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGD 148
YCHRH +HRD+KPEN+LL + VK+ DFG + ++ G + Y APE++ G
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 187
Query: 149 TLYGPAVDVWA 159
GP VDVW+
Sbjct: 188 LYAGPEVDVWS 198
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 12/166 (7%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD---- 57
R KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 45 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYLV 101
Query: 58 -HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +K
Sbjct: 102 THLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161
Query: 115 LCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 162 ILDFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 205
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 85/143 (59%), Gaps = 12/143 (8%)
Query: 29 RSLKHPNLVNLLEVFRRK------KKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ KH N++ + ++ R K +++V + + + L+++ + L + ++ +Q
Sbjct: 108 KHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQ 166
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGEN---YTDYVATR 137
+LRG+ Y H IHRD+KP N+L+ N +K+ DFG AR + +P E+ T+YVATR
Sbjct: 167 LLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
WYRAPEL++ Y A+D+W++
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSV 249
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGV 87
+ L HPN+V L EV +K L+LV E+ V + L H + + Q++ V
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAV 126
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
YCH+ +HRD+K EN+LL A+ +K+ DFGF+ G + + Y APEL G
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQG 186
Query: 148 DTLYGPAVDVWAI 160
GP VDVW++
Sbjct: 187 KKYDGPEVDVWSL 199
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGV 87
+ L HPN+V L EV +K L+LV E+ V + L H + + Q++ V
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAV 126
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
YCH+ +HRD+K EN+LL A+ +K+ DFGF+ G + + Y APEL G
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQG 186
Query: 148 DTLYGPAVDVWAI 160
GP VDVW++
Sbjct: 187 KKYDGPEVDVWSL 199
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKK------LHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + L+LV ++ TV ++ LP +K
Sbjct: 102 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 161
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE + +R+
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 221
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 222 YRAPELIFGATDYTSSIDVWS 242
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R L+HP+++ L +V + K ++ +V E+ + + + + + ++ Q++ V
Sbjct: 68 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR-DKMSEQEARRFFQQIISAVE 126
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGD 148
YCHRH +HRD+KPEN+LL + VK+ DFG + ++ G + Y APE++ G
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 186
Query: 149 TLYGPAVDVWA 159
GP VDVW+
Sbjct: 187 LYAGPEVDVWS 197
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + + L+LV ++ TV ++ LP +K
Sbjct: 80 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 139
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE + +R+
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 199
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 200 YRAPELIFGATDYTSSIDVWS 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ FG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILGFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+SL HPN++ L +VF KK +LV EF + L E + H I Q+L G+
Sbjct: 101 KSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGIC 160
Query: 89 YCHRHACIHRDIKPENILLTANGV---VKLCDFGFARLINPGENYTDYVATRWYRAPELL 145
Y H+H +HRDIKPENILL +K+ DFG + + D + T +Y APE+L
Sbjct: 161 YLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL 220
Query: 146 VGDTLYGPAVDVWA 159
Y DVW+
Sbjct: 221 --KKKYNEKCDVWS 232
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + + L+LV ++ TV ++ LP +K
Sbjct: 80 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 139
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE + +R+
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 199
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 200 YRAPELIFGATDYTSSIDVWS 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T VATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDFGLAR--HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + + L+LV ++ TV ++ LP +K
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE + +R+
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 188 YRAPELIFGATDYTSSIDVWS 208
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + + L+LV ++ TV ++ LP +K
Sbjct: 87 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 146
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE + +R+
Sbjct: 147 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 206
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 207 YRAPELIFGATDYTSSIDVWS 227
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + + L+LV ++ TV ++ LP +K
Sbjct: 76 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 135
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE + +R+
Sbjct: 136 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 195
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 196 YRAPELIFGATDYTSSIDVWS 216
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R L+HP+++ L +V + K ++ +V E+ + + + + + ++ Q++ V
Sbjct: 59 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR-DKMSEQEARRFFQQIISAVE 117
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGD 148
YCHRH +HRD+KPEN+LL + VK+ DFG + ++ G + Y APE++ G
Sbjct: 118 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 177
Query: 149 TLYGPAVDVWA 159
GP VDVW+
Sbjct: 178 LYAGPEVDVWS 188
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + + L+LV ++ TV ++ LP +K
Sbjct: 72 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 131
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE + +R+
Sbjct: 132 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 191
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 192 YRAPELIFGATDYTSSIDVWS 212
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + + L+LV ++ TV ++ LP +K
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE + +R+
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 188 YRAPELIFGATDYTSSIDVWS 208
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + + L+LV ++ TV ++ LP +K
Sbjct: 69 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 128
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE + +R+
Sbjct: 129 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 188
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 189 YRAPELIFGATDYTSSIDVWS 209
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKK------LHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + L+LV ++ TV ++ LP +K
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE + +R+
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 188 YRAPELIFGATDYTSSIDVWS 208
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R L+HP+++ L +V + K ++ +V E+ + + + + + ++ Q++ V
Sbjct: 63 RLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR-DKMSEQEARRFFQQIISAVE 121
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGD 148
YCHRH +HRD+KPEN+LL + VK+ DFG + ++ G + Y APE++ G
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK 181
Query: 149 TLYGPAVDVWA 159
GP VDVW+
Sbjct: 182 LYAGPEVDVWS 192
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ D G AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDAGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGV 87
+ L HPN+V L EV +K L+LV E+ V + L H + + Q++ V
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAV 126
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
YCH+ +HRD+K EN+LL A+ +K+ DFGF+ G + Y APEL G
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQG 186
Query: 148 DTLYGPAVDVWAI 160
GP VDVW++
Sbjct: 187 KKYDGPEVDVWSL 199
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 82/139 (58%), Gaps = 11/139 (7%)
Query: 31 LKHPNLVNLLEVFR-----RKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+H N++ + ++ R + K +++V + + T L +L H L D I +Q+LR
Sbjct: 78 FRHENIIGINDIIRAPTIEQMKDVYIVQDLME-TDLYKLLKTQH-LSNDHICYFLYQILR 135
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRA 141
G+ Y H +HRD+KP N+LL +K+ DFG AR+ +P ++ T+YVATRWYRA
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+++ Y ++D+W++
Sbjct: 196 PEIMLNSKGYTKSIDIWSV 214
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 6/136 (4%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL--NELEN--HPHGLPWDLIKQITWQVL 84
+ LKH N++ LL+VF + E T L +L N L + ++ + +Q+L
Sbjct: 82 KHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 141
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPEL 144
RG+ Y H IHRD+KP N+ + + +++ DFG AR + E T YVATRWYRAPE+
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQAD--EEMTGYVATRWYRAPEI 199
Query: 145 LVGDTLYGPAVDVWAI 160
++ Y VD+W++
Sbjct: 200 MLNWMHYNQTVDIWSV 215
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGVSY 89
L HPN+V L EV +K L+L+ E+ V + L H + + Q++ V Y
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR-MKEKEARSKFRQIVSAVQY 129
Query: 90 CHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDT 149
CH+ +HRD+K EN+LL A+ +K+ DFGF+ G + Y APEL G
Sbjct: 130 CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKK 189
Query: 150 LYGPAVDVWAI 160
GP VDVW++
Sbjct: 190 YDGPEVDVWSL 200
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITW---QVL 84
+ L HPN+V L EV +K L+LV E+ V + L H W K+ Q++
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG----WMKEKEARAKFRQIV 116
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPEL 144
V YCH+ +HRD+K EN+LL A+ +K+ DFGF+ G + + Y APEL
Sbjct: 117 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPEL 176
Query: 145 LVGDTLYGPAVDVWAI 160
G GP VDVW++
Sbjct: 177 FQGKKYDGPEVDVWSL 192
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 85/143 (59%), Gaps = 12/143 (8%)
Query: 29 RSLKHPNLVNLLEVFRRK------KKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ KH N++ + ++ R K +++V + + + L+++ + L + ++ +Q
Sbjct: 109 KHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQ 167
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGEN---YTDYVATR 137
+LRG+ Y H IHRD+KP N+L+ N +K+ DFG AR + +P E+ T+YVATR
Sbjct: 168 LLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
WYRAPEL++ Y A+D+W++
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSV 250
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 10/141 (7%)
Query: 29 RSLKHPNLVNLLEVF------RRKKKLHLVFEFCDHTVLNELENHPHG---LPWDLIKQI 79
R L H N+V L F + + L+LV ++ TV ++ LP +K
Sbjct: 68 RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLY 127
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRW 138
+Q+ R ++Y H HRDIKP+N+LL + V+KLCDFG A+ + GE + +R+
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 187
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
YRAPEL+ G T Y ++DVW+
Sbjct: 188 YRAPELIFGATDYTSSIDVWS 208
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
L+ KK S ++ I + + +KH N++ LL+VF L EF D
Sbjct: 77 LKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLE---EFNDVYL 133
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 134 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 193
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ DFG AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 194 KILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSV 238
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGVSY 89
L HPN+V L EV +K L+LV E+ V + L H + + Q++ V Y
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAVQY 129
Query: 90 CHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDT 149
CH+ +HRD+K EN+LL + +K+ DFGF+ G + + Y APEL G
Sbjct: 130 CHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 150 LYGPAVDVWAI 160
GP VDVW++
Sbjct: 190 YDGPEVDVWSL 200
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ D G AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDGGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 12/167 (7%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD--- 57
LR KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 48 LRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYL 104
Query: 58 --HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVV 113
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +
Sbjct: 105 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCEL 164
Query: 114 KLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
K+ D G AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 165 KILDRGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGV 87
+ L HPN+V L EV +K L+LV E+ V + L H + + Q++ V
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAV 126
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
YCH+ +HRD+K EN+LL A+ +K+ DFGF+ G + Y APEL G
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQG 186
Query: 148 DTLYGPAVDVWAI 160
GP VDVW++
Sbjct: 187 KKYDGPEVDVWSL 199
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 6/136 (4%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL--NELEN--HPHGLPWDLIKQITWQVL 84
+ LKH N++ LL+VF + E T L +L N L + ++ + +Q+L
Sbjct: 74 KHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLL 133
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPEL 144
RG+ Y H IHRD+KP N+ + + +++ DFG AR + E T YVATRWYRAPE+
Sbjct: 134 RGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD--EEMTGYVATRWYRAPEI 191
Query: 145 LVGDTLYGPAVDVWAI 160
++ Y VD+W++
Sbjct: 192 MLNWMHYNQTVDIWSV 207
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD---- 57
R KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYLV 105
Query: 58 -HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 115 LCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+ DFG AR + + +VATRWYRAPE+++ Y VD+W++
Sbjct: 166 ILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD---- 57
R KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYLV 105
Query: 58 -HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 115 LCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+ DFG AR + + +VATRWYRAPE+++ Y VD+W++
Sbjct: 166 ILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD---- 57
R KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 45 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYLV 101
Query: 58 -HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +K
Sbjct: 102 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 161
Query: 115 LCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+ DFG AR + + +VATRWYRAPE+++ Y VD+W++
Sbjct: 162 ILDFGLAR--HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSV 205
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD---- 57
R KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYLV 105
Query: 58 -HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +K
Sbjct: 106 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 165
Query: 115 LCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+ DF AR + + T YVATRWYRAPE+++ Y VD+W++
Sbjct: 166 ILDFYLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSV 209
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 5/137 (3%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L+HPN + + R+ LV E+C + + LE H L I +T L+G++
Sbjct: 109 QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 168
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG- 147
Y H H IHRD+K NILL+ G+VKL DFG A ++ P +V T ++ APE+++
Sbjct: 169 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAM 225
Query: 148 -DTLYGPAVDVWAIEWT 163
+ Y VDVW++ T
Sbjct: 226 DEGQYDGKVDVWSLGIT 242
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 11/97 (11%)
Query: 74 DLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPG------ 127
D I+ +Q LR V H IHRD+KP N+L+ +N +K+CDFG AR+I+
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 128 -----ENYTDYVATRWYRAPELLVGDTLYGPAVDVWA 159
T+YVATRWYRAPE+++ Y A+DVW+
Sbjct: 172 PTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWS 208
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 5/137 (3%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L+HPN + + R+ LV E+C + + LE H L I +T L+G++
Sbjct: 70 QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLA 129
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG- 147
Y H H IHRD+K NILL+ G+VKL DFG A ++ P +V T ++ APE+++
Sbjct: 130 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAM 186
Query: 148 -DTLYGPAVDVWAIEWT 163
+ Y VDVW++ T
Sbjct: 187 DEGQYDGKVDVWSLGIT 203
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + ++ L + + + +Q
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 135 MLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + ++ L + + + +Q
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 135 MLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPWDL----IKQITWQ 82
+ + H N++ LL VF +K L EF D ++ EL N + +L + + +Q
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLE---EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCD---- 57
R KK S ++ I + + +KH N++ LL+VF + L EF D
Sbjct: 69 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE---EFNDVYLV 125
Query: 58 -HTVLNELEN--HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
H + +L N L D ++ + +Q+LRG+ Y H IHRD+KP N+ + + +K
Sbjct: 126 THLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 185
Query: 115 LCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+ DFG AR + + VATRWYRAPE+++ Y VD+W++
Sbjct: 186 ILDFGLAR--HTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSV 229
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + ++ L + + + +Q
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLYQ 127
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 128 MLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 187
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 188 EVILG-MGYKENVDIWSV 204
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPWDL----IKQITWQ 82
+ + H N++ LL VF +K L EF D ++ EL N + +L + + +Q
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLE---EFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N++ LL VF +K L ++V E D + ++ L + + + +Q
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + ++ L + + + +Q
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + ++ L + + + +Q
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L+HP+++ L +V + +V E+ + + + + D ++ Q++ + YC
Sbjct: 66 LRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKR-MTEDEGRRFFQQIICAIEYC 124
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
HRH +HRD+KPEN+LL N VK+ DFG + ++ G + Y APE++ G
Sbjct: 125 HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLY 184
Query: 151 YGPAVDVWA 159
GP VDVW+
Sbjct: 185 AGPEVDVWS 193
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + ++ L + + + +Q
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQ 172
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 173 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 233 EVILG-MGYKENVDIWSV 249
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N++ LL VF +K L ++V E D + ++ L + + + +Q
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N++ LL VF +K L ++V E D + ++ L + + + +Q
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + ++ L + + + +Q
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQ 172
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 173 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 233 EVILG-MGYKENVDIWSV 249
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + ++ L + + + +Q
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQ 135
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 196 EVILG-MGYKENVDIWSV 212
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + ++ L + + + +Q
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 78/137 (56%), Gaps = 9/137 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPH---GLPW--DLIKQITWQV 83
+ ++H N++ LL+VF L ++F + V+ ++ GL + + I+ + +Q+
Sbjct: 78 KHMQHENVIGLLDVFTPASSLRNFYDF--YLVMPFMQTDLQKIMGLKFSEEKIQYLVYQM 135
Query: 84 LRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPE 143
L+G+ Y H +HRD+KP N+ + + +K+ DFG AR + T YV TRWYRAPE
Sbjct: 136 LKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVVTRWYRAPE 193
Query: 144 LLVGDTLYGPAVDVWAI 160
+++ Y VD+W++
Sbjct: 194 VILSWMHYNQTVDIWSV 210
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + ++ L + + + +Q
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + ++ L + + + +Q
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQ 135
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 196 EVILG-MGYKENVDIWSV 212
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + ++ L + + + +Q
Sbjct: 77 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQ 133
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 134 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 193
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 194 EVILG-MGYKENVDIWSV 210
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + ++ L + + + +Q
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQ 127
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 128 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 187
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 188 EVILG-MGYKENVDIWSV 204
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + ++ L + + + +Q
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQ 128
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 189 EVILG-MGYKENVDIWSV 205
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + ++ L + + + +Q
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQ 128
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 189 EVILG-MGYKENVDIWSV 205
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Query: 14 EAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPW 73
E +R+AT ++ HP+++ L++ + + LVF+ L + L
Sbjct: 140 EEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSE 199
Query: 74 DLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDY 133
+ I +L VS+ H + +HRD+KPENILL N ++L DFGF+ + PGE +
Sbjct: 200 KETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLREL 259
Query: 134 VATRWYRAPELL---VGDTL--YGPAVDVWA 159
T Y APE+L + +T YG VD+WA
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWA 290
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N++ LL VF +K L ++V E D + ++ L + + + +Q
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 78/137 (56%), Gaps = 9/137 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPH---GLPW--DLIKQITWQV 83
+ ++H N++ LL+VF L ++F + V+ ++ G+ + + I+ + +Q+
Sbjct: 96 KHMQHENVIGLLDVFTPASSLRNFYDF--YLVMPFMQTDLQKIMGMEFSEEKIQYLVYQM 153
Query: 84 LRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPE 143
L+G+ Y H +HRD+KP N+ + + +K+ DFG AR + T YV TRWYRAPE
Sbjct: 154 LKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVVTRWYRAPE 211
Query: 144 LLVGDTLYGPAVDVWAI 160
+++ Y VD+W++
Sbjct: 212 VILSWMHYNQTVDIWSV 228
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + + L + + + +Q
Sbjct: 76 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHERMSYLLYQ 132
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR + T YV TR+YRAP
Sbjct: 133 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAP 192
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 193 EVILG-MGYKENVDIWSV 209
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N++ LL VF +K L ++V E D + ++ L + + + +Q
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 24/135 (17%)
Query: 48 KLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILL 107
+L++V E D + L +L P L + IK I + +L G ++ H IHRD+KP N LL
Sbjct: 104 ELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL 162
Query: 108 TANGVVKLCDFGFARLIN----------------PG-------ENYTDYVATRWYRAPEL 144
+ VK+CDFG AR IN PG + T +V TRWYRAPEL
Sbjct: 163 NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPEL 222
Query: 145 LVGDTLYGPAVDVWA 159
++ Y ++D+W+
Sbjct: 223 ILLQENYTKSIDIWS 237
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N++ LL VF +K L ++V E D + ++ L + + + +Q
Sbjct: 79 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQ 135
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 196 EVILG-MGYKENVDIWSV 212
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 56/97 (57%), Gaps = 11/97 (11%)
Query: 74 DLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPG------ 127
D I+ +Q LR V H IHRD+KP N+L+ +N +K+CDFG AR+I+
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 128 -----ENYTDYVATRWYRAPELLVGDTLYGPAVDVWA 159
T+ VATRWYRAPE+++ Y A+DVW+
Sbjct: 172 PTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWS 208
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N++ LL VF +K L ++V E D + ++ L + + + +Q
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRRK--KKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN+V LL++ R + K L+FE+ ++T L +P +D I+ +++L+ + YCH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTLTDYD-IRYYIYELLKALDYCH 143
Query: 92 RHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ ++L D+G A +PG+ Y VA+R+++ PELLV
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 204 YDYSLDMWSL 213
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRRK--KKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN+V LL++ R + K L+FE+ ++T L +P +D I+ +++L+ + YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTLTDYD-IRYYIYELLKALDYCH 142
Query: 92 RHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ ++L D+G A +PG+ Y VA+R+++ PELLV
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 203 YDYSLDMWSL 212
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 11/97 (11%)
Query: 74 DLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPG------ 127
D I+ +Q LR V H IHRD+KP N+L+ +N +K+CDFG AR+I+
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 128 -----ENYTDYVATRWYRAPELLVGDTLYGPAVDVWA 159
++VATRWYRAPE+++ Y A+DVW+
Sbjct: 172 PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWS 208
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRRK--KKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN+V LL++ R + K L+FE+ ++T L +P +D I+ +++L+ + YCH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTLTDYD-IRYYIYELLKALDYCH 143
Query: 92 RHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ ++L D+G A +PG+ Y VA+R+++ PELLV
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 204 YDYSLDMWSL 213
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N+++LL VF +K L +LV E D + + L + + + +Q
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYAANVDIWSV 211
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ ++H N++ LL+VF + L +LV F T L +L H L D I+ + +Q
Sbjct: 79 KHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMG-TDLGKLMKH-EKLGEDRIQFLVYQ 136
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L+G+ Y H IHRD+KP N+ + + +K+ DFG AR + V TRWYRAP
Sbjct: 137 MLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD--SEMXGXVVTRWYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++ Y VD+W++
Sbjct: 195 EVILNWMRYTQTVDIWSV 212
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRRK--KKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN+V LL++ R + K L+FE+ ++T L +P +D I+ +++L+ + YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTLTDYD-IRYYIYELLKALDYCH 142
Query: 92 RHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ ++L D+G A +PG+ Y VA+R+++ PELLV
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 203 YDYSLDMWSL 212
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRRK--KKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN+V LL++ R + K L+FE+ ++T L +P +D I+ +++L+ + YCH
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTLTDYD-IRYYIYELLKALDYCH 144
Query: 92 RHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ ++L D+G A +PG+ Y VA+R+++ PELLV
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 204
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 205 YDYSLDMWSL 214
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRRK--KKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN+V LL++ R + K L+FE+ ++T L +P +D I+ +++L+ + YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTLTDYD-IRYYIYELLKALDYCH 142
Query: 92 RHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ ++L D+G A +PG+ Y VA+R+++ PELLV
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 203 YDYSLDMWSL 212
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRRK--KKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN+V LL++ R + K L+FE+ ++T L +P +D I+ +++L+ + YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTLTDYD-IRYYIYELLKALDYCH 142
Query: 92 RHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ ++L D+G A +PG+ Y VA+R+++ PELLV
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 203 YDYSLDMWSL 212
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRRK--KKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN+V LL++ R + K L+FE+ ++T L +P +D I+ +++L+ + YCH
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTLTDYD-IRYYIYELLKALDYCH 163
Query: 92 RHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ ++L D+G A +PG+ Y VA+R+++ PELLV
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 223
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 224 YDYSLDMWSL 233
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRRK--KKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN+V LL++ R + K L+FE+ ++T L +P +D I+ +++L+ + YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTLTDYD-IRYYIYELLKALDYCH 142
Query: 92 RHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ ++L D+G A +PG+ Y VA+R+++ PELLV
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 203 YDYSLDMWSL 212
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 78/130 (60%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRRK--KKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN+V LL++ R + K L+FE+ ++T L +P +D I+ +++L+ + YCH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVL--YPTLTDYD-IRYYIYELLKALDYCH 142
Query: 92 RHACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ ++L D+G A +PG+ Y VA+R+++ PELLV
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 203 YDYSLDMWSL 212
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N++ LL VF +K L ++V E D + ++ L + + + +Q
Sbjct: 83 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQ 139
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 140 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 199
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 200 EVILG-MGYKENVDLWSV 216
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N++ LL VF +K L ++V E D + ++ L + + + +Q
Sbjct: 72 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQ 128
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T YV TR+YRAP
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 189 EVILG-MGYKENVDLWSV 205
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 68/138 (49%), Gaps = 27/138 (19%)
Query: 48 KLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILL 107
+L++V E D + L +L P L +K I + +L G + H IHRD+KP N LL
Sbjct: 106 ELYIVLEIAD-SDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLL 164
Query: 108 TANGVVKLCDFGFARLIN-------------------PG-------ENYTDYVATRWYRA 141
+ VK+CDFG AR IN PG + T +V TRWYRA
Sbjct: 165 NQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRA 224
Query: 142 PELLVGDTLYGPAVDVWA 159
PEL++ Y ++D+W+
Sbjct: 225 PELILLQENYTNSIDIWS 242
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N++ LL VF +K L ++V E D + ++ L + + + +Q
Sbjct: 80 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQ 136
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR +V TR+YRAP
Sbjct: 137 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAP 196
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 197 EVILG-MGYKENVDIWSV 213
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK++ S + + + R ++HPN++ L ++F K + L+ E L
Sbjct: 43 KFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL 102
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILL----TANGVVKLCD 117
+ L D Q Q+L GV Y H H D+KPENI+L N +KL D
Sbjct: 103 FDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLID 162
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I G + + T + APE++ + L G D+W+I
Sbjct: 163 FGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 204
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 34 PNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC-HR 92
P +V F ++ + E D L+++ +P +++ +++ VLRG++Y +
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 133
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLY 151
H +HRD+KP NIL+ + G +KLCDFG + +LI+ N +V TR Y APE L G T Y
Sbjct: 134 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMAPERLQG-THY 190
Query: 152 GPAVDVWAI 160
D+W++
Sbjct: 191 SVQSDIWSM 199
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R K+PN+VN L+ + +L +V E+ L ++ + I + + L+ +
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALE 130
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN-YTDYVATRWYRAPELLVG 147
+ H + IHRDIK +NILL +G VKL DFGF I P ++ ++ V T ++ APE +V
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPE-VVT 189
Query: 148 DTLYGPAVDVWAI 160
YGP VD+W++
Sbjct: 190 RKAYGPKVDIWSL 202
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 76/136 (55%), Gaps = 11/136 (8%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFE-FCDHTVLNELENHPHGLPWDLIKQ--ITWQVLRGV 87
L HPN++ L + F K+ +LV E + + +E+ H + ++ + I QVL GV
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI---IHRMKFNEVDAAVIIKQVLSGV 149
Query: 88 SYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPGENYTDYVATRWYRAPEL 144
+Y H+H +HRD+KPEN+LL + + ++K+ DFG + + + + + T +Y APE+
Sbjct: 150 TYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV 209
Query: 145 LVGDTLYGPAVDVWAI 160
L Y DVW+I
Sbjct: 210 L--RKKYDEKCDVWSI 223
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK++ S + + + R ++HPN++ L ++F K + L+ E L
Sbjct: 36 KFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL 95
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILL----TANGVVKLCD 117
+ L D Q Q+L GV Y H H D+KPENI+L N +KL D
Sbjct: 96 FDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLID 155
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I G + + T + APE++ + L G D+W+I
Sbjct: 156 FGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 197
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N++ LL VF +K L ++V E D + ++ L + + + +Q
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR T V TR+YRAP
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 34/163 (20%)
Query: 31 LKHPNLVNLLEVFRRKK-----KLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
L H ++V +L++ K +L++V E D + +L P L IK + + +L
Sbjct: 109 LNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLV 167
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN---------------- 129
GV Y H +HRD+KP N L+ + VK+CDFG AR ++ EN
Sbjct: 168 GVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227
Query: 130 ------------YTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
T +V TRWYRAPEL++ Y A+DVW+I
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSI 270
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 80/150 (53%), Gaps = 21/150 (14%)
Query: 29 RSLKHPNLVNLLEVF--------------RRKKKLHLVFEFCDHTVLNELENHPHGLPWD 74
R L H N+V + E+ +++V E+ + + N LE P L +
Sbjct: 63 RRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP--LLEE 120
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILL-TANGVVKLCDFGFARLINPGENYTDY 133
+ +Q+LRG+ Y H +HRD+KP N+ + T + V+K+ DFG AR+++P ++ +
Sbjct: 121 HARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGH 180
Query: 134 VA----TRWYRAPELLVGDTLYGPAVDVWA 159
++ T+WYR+P LL+ Y A+D+WA
Sbjct: 181 LSEGLVTKWYRSPRLLLSPNNYTKAIDMWA 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R ++HPN++ L ++F K + L+ E L + L D Q Q+L GV
Sbjct: 84 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH 143
Query: 89 YCHRHACIHRDIKPENILL----TANGVVKLCDFGFARLINPGENYTDYVATRWYRAPEL 144
Y H H D+KPENI+L N +KL DFG A I G + + T + APE+
Sbjct: 144 YLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEI 203
Query: 145 LVGDTLYGPAVDVWAI 160
+ + L G D+W+I
Sbjct: 204 VNYEPL-GLEADMWSI 218
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 14/154 (9%)
Query: 17 RQATEATNKKEK-------RSLKHPNLVNLLEVFRRKKKLHLVFE-FCDHTVLNELENHP 68
RQ + T+K+ + L HPN++ L E F K +LV E + + +E+ +
Sbjct: 62 RQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK 121
Query: 69 HGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILL---TANGVVKLCDFGFARLIN 125
D + I QVL G++Y H++ +HRD+KPEN+LL + + +++ DFG +
Sbjct: 122 RFSEVDAAR-IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
Query: 126 PGENYTDYVATRWYRAPELLVGDTLYGPAVDVWA 159
+ D + T +Y APE+L G Y DVW+
Sbjct: 181 ASKKMKDKIGTAYYIAPEVLHG--TYDEKCDVWS 212
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 14/154 (9%)
Query: 17 RQATEATNKKEK-------RSLKHPNLVNLLEVFRRKKKLHLVFE-FCDHTVLNELENHP 68
RQ + T+K+ + L HPN++ L E F K +LV E + + +E+ +
Sbjct: 86 RQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK 145
Query: 69 HGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILL---TANGVVKLCDFGFARLIN 125
D + I QVL G++Y H++ +HRD+KPEN+LL + + +++ DFG +
Sbjct: 146 RFSEVDAAR-IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 204
Query: 126 PGENYTDYVATRWYRAPELLVGDTLYGPAVDVWA 159
+ D + T +Y APE+L G Y DVW+
Sbjct: 205 ASKKMKDKIGTAYYIAPEVLHG--TYDEKCDVWS 236
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 14/154 (9%)
Query: 17 RQATEATNKKEK-------RSLKHPNLVNLLEVFRRKKKLHLVFE-FCDHTVLNELENHP 68
RQ + T+K+ + L HPN++ L E F K +LV E + + +E+ +
Sbjct: 85 RQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK 144
Query: 69 HGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILL---TANGVVKLCDFGFARLIN 125
D + I QVL G++Y H++ +HRD+KPEN+LL + + +++ DFG +
Sbjct: 145 RFSEVDAAR-IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 203
Query: 126 PGENYTDYVATRWYRAPELLVGDTLYGPAVDVWA 159
+ D + T +Y APE+L G Y DVW+
Sbjct: 204 ASKKMKDKIGTAYYIAPEVLHG--TYDEKCDVWS 235
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE----LENHPHGLPWDLIKQITWQVL 84
+SL HPN++ + EVF +++V E C+ L E + L + ++ Q++
Sbjct: 75 KSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMM 134
Query: 85 RGVSYCHRHACIHRDIKPENILL---TANGVVKLCDFGFARLINPGENYTDYVATRWYRA 141
++Y H +H+D+KPENIL + + +K+ DFG A L E+ T+ T Y A
Sbjct: 135 NALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMA 194
Query: 142 PELLVGDTLYGPAVDVWA 159
PE+ D + D+W+
Sbjct: 195 PEVFKRDVTF--KCDIWS 210
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R K+PN+VN L+ + +L +V E+ L ++ + I + + L+ +
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALE 130
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN-YTDYVATRWYRAPELLVG 147
+ H + IHRDIK +NILL +G VKL DFGF I P ++ + V T ++ APE +V
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE-VVT 189
Query: 148 DTLYGPAVDVWAI 160
YGP VD+W++
Sbjct: 190 RKAYGPKVDIWSL 202
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFE-FCDHTVLNELENHPHGLPWDLIKQITWQVLRGV 87
+ L HPN++ L E+ ++V E + + +E+ D + I QV G+
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR-IIKQVFSGI 134
Query: 88 SYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPGENYTDYVATRWYRAPEL 144
+Y H+H +HRD+KPENILL + + +K+ DFG + D + T +Y APE+
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 145 LVGDTLYGPAVDVWA 159
L G Y DVW+
Sbjct: 195 LRG--TYDEKCDVWS 207
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R K+PN+VN L+ + +L +V E+ L ++ + I + + L+ +
Sbjct: 72 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALE 130
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN-YTDYVATRWYRAPELLVG 147
+ H + IHRDIK +NILL +G VKL DFGF I P ++ + V T ++ APE +V
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE-VVT 189
Query: 148 DTLYGPAVDVWAI 160
YGP VD+W++
Sbjct: 190 RKAYGPKVDIWSL 202
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R K+PN+VN L+ + +L +V E+ L ++ + I + + L+ +
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALE 131
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN-YTDYVATRWYRAPELLVG 147
+ H + IHRDIK +NILL +G VKL DFGF I P ++ + V T ++ APE +V
Sbjct: 132 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE-VVT 190
Query: 148 DTLYGPAVDVWAI 160
YGP VD+W++
Sbjct: 191 RKAYGPKVDIWSL 203
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 16/140 (11%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVF------EFCDHTVLNELENHPHGLPWDLIKQITWQ 82
R L+HPN+V L + + + +LVF E + V E + Q
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA------SHCIQQ 136
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPGENYTDYVATRWY 139
+L ++YCH + +HR++KPEN+LL + VKL DFG A +N E + + T Y
Sbjct: 137 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 196
Query: 140 RAPELLVGDTLYGPAVDVWA 159
+PE+L D Y VD+WA
Sbjct: 197 LSPEVLKKDP-YSKPVDIWA 215
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN++ L ++ + + LVFE ++T +L L I+ +++L+ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLRQ---TLTDYDIRFYMYEILKALDYCH 148
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ + ++L D+G A +PG+ Y VA+R+++ PELLV +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 209 YDYSLDMWSL 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 14/154 (9%)
Query: 17 RQATEATNKKEK-------RSLKHPNLVNLLEVFRRKKKLHLVFE-FCDHTVLNELENHP 68
RQ + T+K+ + L HPN++ L E F K +LV E + + +E+ +
Sbjct: 68 RQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK 127
Query: 69 HGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILL---TANGVVKLCDFGFARLIN 125
D + I QVL G++Y H++ +HRD+KPEN+LL + + +++ DFG +
Sbjct: 128 RFSEVDAAR-IIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 186
Query: 126 PGENYTDYVATRWYRAPELLVGDTLYGPAVDVWA 159
+ D + T +Y APE+L G Y DVW+
Sbjct: 187 ASKKMKDKIGTAYYIAPEVLHG--TYDEKCDVWS 218
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN++ L ++ + + LVFE ++T +L L I+ +++L+ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 148
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+L+ + ++L D+G A +PG+ Y VA+R+++ PELLV +
Sbjct: 149 SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 209 YDYSLDMWSL 218
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 33 HPNLVNLLEVFRR-----KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGV 87
HPN++ L ++F KL+LV E + + + + I+ + +L G+
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
H +HRD+ P NILL N + +CDF AR N T YV RWYRAPEL++
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQ 207
Query: 148 DTLYGPAVDVWA 159
+ VD+W+
Sbjct: 208 FKGFTKLVDMWS 219
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 33 HPNLVNLLEVFRR-----KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGV 87
HPN++ L ++F KL+LV E + + + + I+ + +L G+
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
H +HRD+ P NILL N + +CDF AR N T YV RWYRAPEL++
Sbjct: 148 HVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQ 207
Query: 148 DTLYGPAVDVWA 159
+ VD+W+
Sbjct: 208 FKGFTKLVDMWS 219
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN++ L ++ + + LVFE ++T +L L I+ +++L+ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 148
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ + ++L D+G A +PG+ Y VA+R+++ PELLV +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 209 YDYSLDMWSL 218
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 14/154 (9%)
Query: 17 RQATEATNKKEK-------RSLKHPNLVNLLEVFRRKKKLHLVFE-FCDHTVLNELENHP 68
RQ + T+K+ + L HPN+ L E F K +LV E + + +E+ +
Sbjct: 62 RQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK 121
Query: 69 HGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILL---TANGVVKLCDFGFARLIN 125
D + I QVL G++Y H++ +HRD+KPEN+LL + + +++ DFG +
Sbjct: 122 RFSEVDAAR-IIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
Query: 126 PGENYTDYVATRWYRAPELLVGDTLYGPAVDVWA 159
+ D + T +Y APE+L G Y DVW+
Sbjct: 181 ASKKXKDKIGTAYYIAPEVLHG--TYDEKCDVWS 212
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN++ L ++ + + LVFE ++T +L L I+ +++L+ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 148
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ + ++L D+G A +PG+ Y VA+R+++ PELLV +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 209 YDYSLDMWSL 218
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN++ L ++ + + LVFE ++T +L L I+ +++L+ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 148
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ + ++L D+G A +PG+ Y VA+R+++ PELLV +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 209 YDYSLDMWSL 218
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN++ L ++ + + LVFE ++T +L L I+ +++L+ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 148
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ + ++L D+G A +PG+ Y VA+R+++ PELLV +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 209 YDYSLDMWSL 218
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN++ L ++ + + LVFE ++T +L L I+ +++L+ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 148
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ + ++L D+G A +PG+ Y VA+R+++ PELLV +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 209 YDYSLDMWSL 218
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 16/140 (11%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVF------EFCDHTVLNELENHPHGLPWDLIKQITWQ 82
R L+HPN+V L + + + +LVF E + V E + Q
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA------SHCIQQ 113
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPGENYTDYVATRWY 139
+L ++YCH + +HR++KPEN+LL + VKL DFG A +N E + + T Y
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 173
Query: 140 RAPELLVGDTLYGPAVDVWA 159
+PE+L D Y VD+WA
Sbjct: 174 LSPEVLKKDP-YSKPVDIWA 192
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN++ L ++ + + LVFE ++T +L L I+ +++L+ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 148
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ + ++L D+G A +PG+ Y VA+R+++ PELLV +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 209 YDYSLDMWSL 218
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N++ LL VF +K L ++V E D + ++ L + + + +Q
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR V TR+YRAP
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDIWSV 211
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN++ L ++ + + LVFE ++T +L L I+ +++L+ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 148
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ + ++L D+G A +PG+ Y VA+R+++ PELLV +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 209 YDYSLDMWSL 218
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN++ L ++ + + LVFE ++T +L L I+ +++L+ + YCH
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 147
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ + ++L D+G A +PG+ Y VA+R+++ PELLV +
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 207
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 208 YDYSLDMWSL 217
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN++ L ++ + + LVFE ++T +L L I+ +++L+ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 148
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ + ++L D+G A +PG+ Y VA+R+++ PELLV +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 209 YDYSLDMWSL 218
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN++ L ++ + + LVFE ++T +L L I+ +++L+ + YCH
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 147
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ + ++L D+G A +PG+ Y VA+R+++ PELLV +
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 207
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 208 YDYSLDMWSL 217
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 16/140 (11%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVF------EFCDHTVLNELENHPHGLPWDLIKQITWQ 82
R L+HPN+V L + + + +LVF E + V E + Q
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA------SHCIQQ 112
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPGENYTDYVATRWY 139
+L ++YCH + +HR++KPEN+LL + VKL DFG A +N E + + T Y
Sbjct: 113 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 172
Query: 140 RAPELLVGDTLYGPAVDVWA 159
+PE+L D Y VD+WA
Sbjct: 173 LSPEVLKKDP-YSKPVDIWA 191
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN++ L ++ + + LVFE ++T +L L I+ +++L+ + YCH
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 153
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ + ++L D+G A +PG+ Y VA+R+++ PELLV +
Sbjct: 154 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 213
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 214 YDYSLDMWSL 223
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 13/144 (9%)
Query: 29 RSLKHPNLVNLLE--VFRRKKKLHLVFEFCD----HTVLNELENHPHGLPWDLIKQITWQ 82
R LKHPN+V + + R L++V E+C+ +V+ + L + + ++ Q
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 83 VLRGVSYCHR-----HACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT-DYVAT 136
+ + CHR H +HRD+KP N+ L VKL DFG AR++N E++ ++V T
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGT 179
Query: 137 RWYRAPELLVGDTLYGPAVDVWAI 160
+Y +PE + Y D+W++
Sbjct: 180 PYYMSPEQM-NRMSYNEKSDIWSL 202
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN++ L ++ + + LVFE ++T +L L I+ +++L+ + YCH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 148
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ + ++L D+G A +PG+ Y VA+R+++ PELLV +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 209 YDYSLDMWSL 218
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 16/140 (11%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVF------EFCDHTVLNELENHPHGLPWDLIKQITWQ 82
R L+HPN+V L + + + +LVF E + V E + Q
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA------SHCIQQ 113
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPGENYTDYVATRWY 139
+L ++YCH + +HR++KPEN+LL + VKL DFG A +N E + + T Y
Sbjct: 114 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGY 173
Query: 140 RAPELLVGDTLYGPAVDVWA 159
+PE+L D Y VD+WA
Sbjct: 174 LSPEVLKKDP-YSKPVDIWA 192
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 34 PNLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
PN++ L ++ + + LVFE ++T +L L I+ +++L+ + YCH
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 146
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ + ++L D+G A +PG+ Y VA+R+++ PELLV +
Sbjct: 147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 206
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 207 YDYSLDMWSL 216
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
++KHPN+V E F L++V ++C+ L + N G+ + + + W Q+ +
Sbjct: 79 NMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL 138
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPG-ENYTDYVATRWYRAPELLV 146
+ H +HRDIK +NI LT +G V+L DFG AR++N E + T +Y +PE +
Sbjct: 139 KHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPE-IC 197
Query: 147 GDTLYGPAVDVWAI 160
+ Y D+WA+
Sbjct: 198 ENKPYNNKSDIWAL 211
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 71/137 (51%), Gaps = 9/137 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL--NELENHPHGLPWD--LIKQITWQVLRG 86
LKHP++V LLE + L++VFEF D L ++ G + + Q+L
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 87 VSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFA-RLINPGENYTDYVATRWYRAP 142
+ YCH + IHRD+KPEN+LL + + VKL DFG A +L G V T + AP
Sbjct: 143 LRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 143 ELLVGDTLYGPAVDVWA 159
E +V YG VDVW
Sbjct: 203 E-VVKREPYGKPVDVWG 218
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 10/138 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL------HLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ + H N++ LL VF +K L ++V E D + ++ L + + + +Q
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQ 134
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
+L G+ + H IHRD+KP NI++ ++ +K+ DFG AR V TR+YRAP
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+++G Y VD+W++
Sbjct: 195 EVILG-MGYKENVDLWSV 211
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R K+PN+VN L+ + +L +V E+ L ++ + I + + L+ +
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALE 131
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN-YTDYVATRWYRAPELLVG 147
+ H + IHR+IK +NILL +G VKL DFGF I P ++ + V T ++ APE+ V
Sbjct: 132 FLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV-VT 190
Query: 148 DTLYGPAVDVWAI 160
YGP VD+W++
Sbjct: 191 RKAYGPKVDIWSL 203
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFE-FCDHTVLNELENHPHGLPWDLIKQITWQVLRGV 87
+ L HPN++ L E+ ++V E + + +E+ D + I QV G+
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR-IIKQVFSGI 134
Query: 88 SYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPGENYTDYVATRWYRAPEL 144
+Y H+H +HRD+KPENILL + + +K+ DFG + D + T +Y APE+
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 145 LVGDTLYGPAVDVWA 159
L G Y DVW+
Sbjct: 195 LRG--TYDEKCDVWS 207
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 7/135 (5%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFE-FCDHTVLNELENHPHGLPWDLIKQITWQVLRGV 87
+ L HPN++ L E+ ++V E + + +E+ D + I QV G+
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR-IIKQVFSGI 134
Query: 88 SYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPGENYTDYVATRWYRAPEL 144
+Y H+H +HRD+KPENILL + + +K+ DFG + D + T +Y APE+
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 145 LVGDTLYGPAVDVWA 159
L G Y DVW+
Sbjct: 195 LRG--TYDEKCDVWS 207
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 34 PNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC-HR 92
P +V F ++ + E D L+++ +P ++ +++ V++G++Y +
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 142
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLY 151
H +HRD+KP NIL+ + G +KLCDFG + +LI+ N +V TR Y +PE L G T Y
Sbjct: 143 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQG-THY 199
Query: 152 GPAVDVWAI 160
D+W++
Sbjct: 200 SVQSDIWSM 208
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR---FDEQRTATYITELANAL 125
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL +NG +K+ DFG++ + P T T Y PE++ G
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 148 DTLYGPAVDVWAIEWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRV 193
++ VD+W++ + + +G+ +H + + RV
Sbjct: 185 -RMHDEKVDLWSLGVLCYEF----LVGMPPFEAHTYQETYRRISRV 225
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 114/258 (44%), Gaps = 34/258 (13%)
Query: 28 KRSLKHPNLVNLLEVFRRKK------KLHLVFEFCDHTVLNELENHPHG--LPWDLIKQI 79
K+ H N+ F +K +L LV EFC + +L + G L + I I
Sbjct: 75 KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYI 134
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGF-ARLINPGENYTDYVATRW 138
++LRG+S+ H+H IHRDIK +N+LLT N VKL DFG A+L ++ T +
Sbjct: 135 CREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPY 194
Query: 139 YRAPELLV----GDTLYGPAVDVWAIEWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVT 194
+ APE++ D Y D+W++ T+ ++ G L +M A L+ N
Sbjct: 195 WMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE-GAPPLCDMHPMRALFLIPRN---- 249
Query: 195 VILKSDSLDSETWDLTWQEIF---------SKTSTTTIFKYLLIRGGNTDRNSHGVVKIL 245
+ L S+ W +Q + +T + K+ IR +R V+I
Sbjct: 250 ---PAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQ----VRIQ 302
Query: 246 GKKLIGRFTYIQSEKQDS 263
K I R + EK ++
Sbjct: 303 LKDHIDRTKKKRGEKDET 320
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R H N+V++ + +L +V EF + L ++ H + + I + VLR +S
Sbjct: 97 RDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIATVCLSVLRALS 155
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGF-ARLINPGENYTDYVATRWYRAPELLVG 147
Y H IHRDIK ++ILLT++G +KL DFGF A++ V T ++ APE ++
Sbjct: 156 YLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPE-VIS 214
Query: 148 DTLYGPAVDVWAI 160
YG VD+W++
Sbjct: 215 RLPYGTEVDIWSL 227
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 34 PNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC-HR 92
P +V F ++ + E D L+++ +P ++ +++ V++G++Y +
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 126
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLY 151
H +HRD+KP NIL+ + G +KLCDFG + +LI+ E ++V TR Y +PE L G T Y
Sbjct: 127 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--EMANEFVGTRSYMSPERLQG-THY 183
Query: 152 GPAVDVWAI 160
D+W++
Sbjct: 184 SVQSDIWSM 192
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 17/140 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFE------FCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ L HPN++ L E F K+ +LV E D +L + + I Q
Sbjct: 59 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV------IMKQ 112
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPGENYTDYVATRWY 139
VL G +Y H+H +HRD+KPEN+LL + + ++K+ DFG + G + + T +Y
Sbjct: 113 VLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYY 172
Query: 140 RAPELLVGDTLYGPAVDVWA 159
APE+L Y DVW+
Sbjct: 173 IAPEVLRKK--YDEKCDVWS 190
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 122
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P TD T Y PE++ G
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEG 181
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 182 -RMHDEKVDLWSL 193
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 126
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P TD T Y PE++ G
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEG 185
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 186 -RMHDEKVDLWSL 197
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 121
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P TD T Y PE++ G
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEG 180
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 181 -RMHDEKVDLWSL 192
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R +H N+V + + +L +V EF + L ++ H + + I + VL+ +S
Sbjct: 83 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALS 141
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGF-ARLINPGENYTDYVATRWYRAPELLVG 147
H IHRDIK ++ILLT +G VKL DFGF A++ V T ++ APE L+
Sbjct: 142 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LIS 200
Query: 148 DTLYGPAVDVWAI 160
YGP VD+W++
Sbjct: 201 RLPYGPEVDIWSL 213
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 121
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P TD T Y PE++ G
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEG 180
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 181 -RMHDEKVDLWSL 192
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R +H N+V + + +L +V EF + L ++ H + + I + VL+ +S
Sbjct: 76 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALS 134
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGF-ARLINPGENYTDYVATRWYRAPELLVG 147
H IHRDIK ++ILLT +G VKL DFGF A++ V T ++ APE L+
Sbjct: 135 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LIS 193
Query: 148 DTLYGPAVDVWAI 160
YGP VD+W++
Sbjct: 194 RLPYGPEVDIWSL 206
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R +H N+V + + +L +V EF + L ++ H + + I + VL+ +S
Sbjct: 72 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALS 130
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGF-ARLINPGENYTDYVATRWYRAPELLVG 147
H IHRDIK ++ILLT +G VKL DFGF A++ V T ++ APE L+
Sbjct: 131 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LIS 189
Query: 148 DTLYGPAVDVWAI 160
YGP VD+W++
Sbjct: 190 RLPYGPEVDIWSL 202
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 34 PNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC-HR 92
P +V F ++ + E D L+++ +P ++ +++ V++G++Y +
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 150
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLY 151
H +HRD+KP NIL+ + G +KLCDFG + +LI+ N +V TR Y +PE L G T Y
Sbjct: 151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQG-THY 207
Query: 152 GPAVDVWAI 160
D+W++
Sbjct: 208 SVQSDIWSM 216
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R +H N+V + + +L +V EF + L ++ H + + I + VL+ +S
Sbjct: 81 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALS 139
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGF-ARLINPGENYTDYVATRWYRAPELLVG 147
H IHRDIK ++ILLT +G VKL DFGF A++ V T ++ APE L+
Sbjct: 140 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LIS 198
Query: 148 DTLYGPAVDVWAI 160
YGP VD+W++
Sbjct: 199 RLPYGPEVDIWSL 211
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 34 PNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC-HR 92
P +V F ++ + E D L+++ +P ++ +++ V++G++Y +
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 185
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLY 151
H +HRD+KP NIL+ + G +KLCDFG + +LI+ N +V TR Y +PE L G T Y
Sbjct: 186 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQG-THY 242
Query: 152 GPAVDVWAI 160
D+W++
Sbjct: 243 SVQSDIWSM 251
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 17/140 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFE------FCDHTVLNELENHPHGLPWDLIKQITWQ 82
+ L HPN++ L E F K+ +LV E D +L + + I Q
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA------AVIMKQ 129
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPGENYTDYVATRWY 139
VL G +Y H+H +HRD+KPEN+LL + + ++K+ DFG + G + + T +Y
Sbjct: 130 VLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYY 189
Query: 140 RAPELLVGDTLYGPAVDVWA 159
APE+L Y DVW+
Sbjct: 190 IAPEVL--RKKYDEKCDVWS 207
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 34 PNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC-HR 92
P +V F ++ + E D L+++ +P ++ +++ V++G++Y +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLY 151
H +HRD+KP NIL+ + G +KLCDFG + +LI+ N +V TR Y +PE L G T Y
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQG-THY 180
Query: 152 GPAVDVWAI 160
D+W++
Sbjct: 181 SVQSDIWSM 189
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 34 PNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC-HR 92
P +V F ++ + E D L+++ +P ++ +++ V++G++Y +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLY 151
H +HRD+KP NIL+ + G +KLCDFG + +LI+ N +V TR Y +PE L G T Y
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQG-THY 180
Query: 152 GPAVDVWAI 160
D+W++
Sbjct: 181 SVQSDIWSM 189
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
RSL+HPN+V EV L ++ E+ L E + D + Q+L GVS
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVS 130
Query: 89 YCHRHACIHRDIKPENILLTANGV--VKLCDFGFARLINPGENYTDYVATRWYRAPELLV 146
YCH HRD+K EN LL + +K+CDFG+++ V T Y APE+L+
Sbjct: 131 YCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 190
Query: 147 GDTLYGPAVDVWA 159
G DVW+
Sbjct: 191 RQEYDGKIADVWS 203
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R +H N+V + + +L +V EF + L ++ H + + I + VL+ +S
Sbjct: 126 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALS 184
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGF-ARLINPGENYTDYVATRWYRAPELLVG 147
H IHRDIK ++ILLT +G VKL DFGF A++ V T ++ APE L+
Sbjct: 185 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LIS 243
Query: 148 DTLYGPAVDVWAI 160
YGP VD+W++
Sbjct: 244 RLPYGPEVDIWSL 256
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 34 PNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC-HR 92
P +V F ++ + E D L+++ +P ++ +++ V++G++Y +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLY 151
H +HRD+KP NIL+ + G +KLCDFG + +LI+ N +V TR Y +PE L G T Y
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQG-THY 180
Query: 152 GPAVDVWAI 160
D+W++
Sbjct: 181 SVQSDIWSM 189
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 34 PNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC-HR 92
P +V F ++ + E D L+++ +P ++ +++ V++G++Y +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLY 151
H +HRD+KP NIL+ + G +KLCDFG + +LI+ N +V TR Y +PE L G T Y
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQG-THY 180
Query: 152 GPAVDVWAI 160
D+W++
Sbjct: 181 SVQSDIWSM 189
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 75/130 (57%), Gaps = 8/130 (6%)
Query: 35 NLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDL-IKQITWQVLRGVSYCH 91
N++ L++ + K LVFE+ ++T +L + + D I+ +++L+ + YCH
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQL----YQILTDFDIRFYMYELLKALDYCH 149
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ ++L D+G A +P + Y VA+R+++ PELLV +
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQM 209
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 210 YDYSLDMWSL 219
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 75/130 (57%), Gaps = 8/130 (6%)
Query: 35 NLVNLLEVFRR--KKKLHLVFEFCDHTVLNELENHPHGLPWDL-IKQITWQVLRGVSYCH 91
N++ L++ + K LVFE+ ++T +L + + D I+ +++L+ + YCH
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQL----YQILTDFDIRFYMYELLKALDYCH 154
Query: 92 RHACIHRDIKPENILLT-ANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+HRD+KP N+++ ++L D+G A +P + Y VA+R+++ PELLV +
Sbjct: 155 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQM 214
Query: 151 YGPAVDVWAI 160
Y ++D+W++
Sbjct: 215 YDYSLDMWSL 224
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 8/159 (5%)
Query: 9 SSYYKEAIRQATEATNKKE---KRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELE 65
S+ E +++ EAT K+ ++ HPN++ L + + LVF+ L +
Sbjct: 43 GSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL 102
Query: 66 NHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN 125
L ++I +L + H+ +HRD+KPENILL + +KL DFGF+ ++
Sbjct: 103 TEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD 162
Query: 126 PGENYTDYVATRWYRAPELL---VGDTL--YGPAVDVWA 159
PGE + T Y APE++ + D YG VD+W+
Sbjct: 163 PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 201
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R +H N+V + + +L +V EF + L ++ H + + I + VL+ +S
Sbjct: 203 RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR-MNEEQIAAVCLAVLQALS 261
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGF-ARLINPGENYTDYVATRWYRAPELLVG 147
H IHRDIK ++ILLT +G VKL DFGF A++ V T ++ APE L+
Sbjct: 262 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LIS 320
Query: 148 DTLYGPAVDVWAI 160
YGP VD+W++
Sbjct: 321 RLPYGPEVDIWSL 333
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 72/129 (55%), Gaps = 5/129 (3%)
Query: 34 PNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC-HR 92
P +V F ++ + E D L+++ +P ++ +++ V++G++Y +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLY 151
H +HRD+KP NIL+ + G +KLCDFG + +LI+ N +V TR Y +PE L G T Y
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQG-THY 180
Query: 152 GPAVDVWAI 160
D+W++
Sbjct: 181 SVQSDIWSM 189
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
RSL+HPN+V EV L +V E+ L E + D + Q++ GVS
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 128
Query: 89 YCHRHACIHRDIKPENILLTANGV--VKLCDFGFARLINPGENYTDYVATRWYRAPELLV 146
YCH HRD+K EN LL + +K+CDFG+++ V T Y APE+L+
Sbjct: 129 YCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 188
Query: 147 GDTLYGPAVDVWA 159
G DVW+
Sbjct: 189 KKEYDGKVADVWS 201
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 10 SYYKEAIRQATEATNKKE---KRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
S+ E +++ EAT K+ ++ HPN++ L + + LVF+ L +
Sbjct: 57 SFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT 116
Query: 67 HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINP 126
L ++I +L + H+ +HRD+KPENILL + +KL DFGF+ ++P
Sbjct: 117 EKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 127 GENYTDYVATRWYRAPELL---VGDTL--YGPAVDVWA 159
GE + T Y APE++ + D YG VD+W+
Sbjct: 177 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
RSL+HPN+V EV L +V E+ L E + D + Q++ GVS
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 89 YCHRHACIHRDIKPENILLTANGV--VKLCDFGFARLINPGENYTDYVATRWYRAPELLV 146
YCH HRD+K EN LL + +K+CDFG+++ V T Y APE+L+
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 189
Query: 147 GDTLYGPAVDVWA 159
G DVW+
Sbjct: 190 KKEYDGKVADVWS 202
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 19/169 (11%)
Query: 6 KKKSSYYKEAIRQATEATNKKEKRS-------LKHPNLVNLLEVFRRKKKLHLVFEFCDH 58
K+K + A++ + +KK R+ L HPN++ L E+F ++ LV E
Sbjct: 73 KQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG 132
Query: 59 TVL----NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NG 111
L E + D +KQI L V+Y H + +HRD+KPEN+L +
Sbjct: 133 GELFDRIVEKGYYSERDAADAVKQI----LEAVAYLHENGIVHRDLKPENLLYATPAPDA 188
Query: 112 VVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+K+ DFG ++++ T Y APE+L G YGP VD+W++
Sbjct: 189 PLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRG-CAYGPEVDMWSV 236
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR---FDEQRTATYITELANAL 125
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL +NG +K+ DFG++ + P T Y PE++ G
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEG 184
Query: 148 DTLYGPAVDVWAIEWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRV 193
++ VD+W++ + + +G+ +H + + RV
Sbjct: 185 -RMHDEKVDLWSLGVLCYEF----LVGMPPFEAHTYQETYRRISRV 225
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 121
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T+ T Y PE++ G
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELCGTLDYLPPEMIEG 180
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 181 -RMHDEKVDLWSL 192
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
RSL+HPN+V EV L +V E+ L E + D + Q++ GVS
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 89 YCHRHACIHRDIKPENILLTANGV--VKLCDFGFARLINPGENYTDYVATRWYRAPELLV 146
YCH HRD+K EN LL + +K+C FG+++ D V T Y APE+L+
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLL 189
Query: 147 GDTLYGPAVDVWA 159
G DVW+
Sbjct: 190 KKEYDGKVADVWS 202
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 147
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P D T Y PE++ G
Sbjct: 148 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEG 206
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 207 -RMHDEKVDLWSL 218
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 10 SYYKEAIRQATEATNKKE---KRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
S+ E +++ EAT K+ ++ HPN++ L + + LVF+ L +
Sbjct: 57 SFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT 116
Query: 67 HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINP 126
L ++I +L + H+ +HRD+KPENILL + +KL DFGF+ ++P
Sbjct: 117 EKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 127 GENYTDYVATRWYRAPELL---VGDTL--YGPAVDVWA 159
GE T Y APE++ + D YG VD+W+
Sbjct: 177 GEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 29 RSLKHPNLVNLLE--VFRRKKKLHLVFEFCD----HTVLNELENHPHGLPWDLIKQITWQ 82
R LKHPN+V + + R L++V E+C+ +V+ + L + + ++ Q
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 83 VLRGVSYCHR-----HACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTD-YVAT 136
+ + CHR H +HRD+KP N+ L VKL DFG AR++N ++ +V T
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGT 179
Query: 137 RWYRAPELLVGDTLYGPAVDVWAI 160
+Y +PE + Y D+W++
Sbjct: 180 PYYMSPEQM-NRMSYNEKSDIWSL 202
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 16/156 (10%)
Query: 16 IRQATEATNKKEKRSLKHPNLVNLLEVFRRKKK----LHLVFEFCDHTVLNELENHPH-G 70
+++ +A N KE S+ +++ LL+ F K + +VFE +L ++ + H G
Sbjct: 69 LQRVNDADNTKED-SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG 127
Query: 71 LPWDLIKQITWQVLRGVSYCHRH-ACIHRDIKPENILL-----TANGV-VKLCDFGFARL 123
+P +KQI+ Q+L G+ Y HR IH DIKPEN+L+ N + +K+ D G A
Sbjct: 128 IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW 187
Query: 124 INPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWA 159
+ E+YT+ + TR YR+PE+L+G +G D+W+
Sbjct: 188 YD--EHYTNSIQTREYRSPEVLLG-APWGCGADIWS 220
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 16/156 (10%)
Query: 16 IRQATEATNKKEKRSLKHPNLVNLLEVFRRKKK----LHLVFEFCDHTVLNELENHPH-G 70
+++ +A N KE S+ +++ LL+ F K + +VFE +L ++ + H G
Sbjct: 69 LQRVNDADNTKED-SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG 127
Query: 71 LPWDLIKQITWQVLRGVSYCHRH-ACIHRDIKPENILL-----TANGV-VKLCDFGFARL 123
+P +KQI+ Q+L G+ Y HR IH DIKPEN+L+ N + +K+ D G A
Sbjct: 128 IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW 187
Query: 124 INPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWA 159
+ E+YT+ + TR YR+PE+L+G +G D+W+
Sbjct: 188 YD--EHYTNSIQTREYRSPEVLLG-APWGCGADIWS 220
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 29 RSLKHPNLVNLLE--VFRRKKKLHLVFEFCD----HTVLNELENHPHGLPWDLIKQITWQ 82
R LKHPN+V + + R L++V E+C+ +V+ + L + + ++ Q
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 83 VLRGVSYCHR-----HACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTD-YVAT 136
+ + CHR H +HRD+KP N+ L VKL DFG AR++N ++ +V T
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGT 179
Query: 137 RWYRAPELLVGDTLYGPAVDVWAI 160
+Y +PE + Y D+W++
Sbjct: 180 PYYMSPEQM-NRMSYNEKSDIWSL 202
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 4/155 (2%)
Query: 8 KSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LEN 66
K + YK + Q + K + LKHP+++ L F ++LV E C + +N L+N
Sbjct: 46 KKAMYKAGMVQRVQNEVKIHCQ-LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN 104
Query: 67 HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA-RLIN 125
+ + Q++ G+ Y H H +HRD+ N+LLT N +K+ DFG A +L
Sbjct: 105 RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164
Query: 126 PGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
P E + T Y +PE + + +G DVW++
Sbjct: 165 PHEKHYTLCGTPNYISPE-IATRSAHGLESDVWSL 198
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 82 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 138
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T T Y PE++ G
Sbjct: 139 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEG 197
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 198 -RMHDEKVDLWSL 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 126
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T T Y PE++ G
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 186 -RMHDEKVDLWSL 197
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 124
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P D T Y PE++ G
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEG 183
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 184 -RMHDEKVDLWSL 195
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 124
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T T Y PE++ G
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 184 -RMHDEKVDLWSL 195
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 147
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T T Y PE++ G
Sbjct: 148 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEG 206
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 207 -RMHDEKVDLWSL 218
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 4 NKKKKSSYYKEAIRQATEATNKKEKRSLK----HPNLVNLLEVFRRKKKLHLVFEFCDHT 59
+KK ++ + I + EA +KE +LK HPN+V L EVF + LV E +
Sbjct: 32 HKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91
Query: 60 VLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLT---ANGVVKLC 116
L E I +++ VS+ H +HRD+KPEN+L T N +K+
Sbjct: 92 ELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKII 151
Query: 117 DFGFARLINP-GENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
DFGFARL P + T Y APELL Y + D+W++
Sbjct: 152 DFGFARLKPPDNQPLKTPCFTLHYAAPELL-NQNGYDESCDLWSL 195
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 12/150 (8%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCD----HTVLNELENHPHGLPWDLIKQITWQVLR 85
S HPN+V LL+ F + L ++ EFC V+ ELE L I+ + Q L
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLD 146
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGF-ARLINPGENYTDYVATRWYRAPEL 144
++Y H + IHRD+K NIL T +G +KL DFG A+ + ++ T ++ APE+
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV 206
Query: 145 LVGDT----LYGPAVDVWAIEWTSHSYSQI 170
++ +T Y DVW++ T ++I
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMAEI 236
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 121
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T T Y PE++ G
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEG 180
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 181 -RMHDEKVDLWSL 192
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 125
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T T Y PE++ G
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 185 -RMHDEKVDLWSL 196
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 12/150 (8%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCD----HTVLNELENHPHGLPWDLIKQITWQVLR 85
S HPN+V LL+ F + L ++ EFC V+ ELE L I+ + Q L
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLD 146
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGF-ARLINPGENYTDYVATRWYRAPEL 144
++Y H + IHRD+K NIL T +G +KL DFG A+ + ++ T ++ APE+
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEV 206
Query: 145 LVGDT----LYGPAVDVWAIEWTSHSYSQI 170
++ +T Y DVW++ T ++I
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMAEI 236
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 124
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T T Y PE++ G
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 184 -RMHDEKVDLWSL 195
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 3/138 (2%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFE--FCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
++H N++ +L++F + LV E + ++ HP L L I Q++ V
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR-LDEPLASYIFRQLVSAVG 144
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGD 148
Y IHRDIK ENI++ + +KL DFG A + G+ + + T Y APE+L+G+
Sbjct: 145 YLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGN 204
Query: 149 TLYGPAVDVWAIEWTSHS 166
GP +++W++ T ++
Sbjct: 205 PYRGPELEMWSLGVTLYT 222
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK+++ + + + + ++HPN++ L EV+ K + L+ E L
Sbjct: 42 KFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + + Q+L GV Y H H D+KPENI+L V +K+ D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I+ G + + T + APE++ + L G D+W+I
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 203
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK+++ + + + + ++HPN++ L EV+ K + L+ E L
Sbjct: 42 KFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + + Q+L GV Y H H D+KPENI+L V +K+ D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I+ G + + T + APE++ + L G D+W+I
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 203
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK+++ + + + + ++HPN++ L EV+ K + L+ E L
Sbjct: 42 KFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + + Q+L GV Y H H D+KPENI+L V +K+ D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I+ G + + T + APE++ + L G D+W+I
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPL-GLEADMWSI 203
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 120
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T T Y PE++ G
Sbjct: 121 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEG 179
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 180 -RMHDEKVDLWSL 191
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 121
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T T Y PE++ G
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPEMIEG 180
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 181 -RMHDEKVDLWSL 192
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 12/150 (8%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCD----HTVLNELENHPHGLPWDLIKQITWQVLR 85
S HPN+V LL+ F + L ++ EFC V+ ELE L I+ + Q L
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLD 146
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGF-ARLINPGENYTDYVATRWYRAPEL 144
++Y H + IHRD+K NIL T +G +KL DFG A+ + ++ T ++ APE+
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEV 206
Query: 145 LVGDT----LYGPAVDVWAIEWTSHSYSQI 170
++ +T Y DVW++ T ++I
Sbjct: 207 VMCETSKDRPYDYKADVWSLGITLIEMAEI 236
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ ++HPN++ L EV+ K + L+ E L + L + + Q+L GV
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 89 YCHRHACIHRDIKPENILLTANGV----VKLCDFGFARLINPGENYTDYVATRWYRAPEL 144
Y H H D+KPENI+L V +K+ DFG A I+ G + + T + APE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 145 LVGDTLYGPAVDVWAI 160
+ + L G D+W+I
Sbjct: 189 VNYEPL-GLEADMWSI 203
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK+++ + + + + ++HPN++ L EV+ K + L+ E L
Sbjct: 42 KFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + + Q+L GV Y H H D+KPENI+L V +K+ D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I+ G + + T + APE++ + L G D+W+I
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 203
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK+++ + + + + ++HPN++ L EV+ K + L+ E L
Sbjct: 42 KFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + + Q+L GV Y H H D+KPENI+L V +K+ D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I+ G + + T + APE++ + L G D+W+I
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 203
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ ++HPN++ L EV+ K + L+ E L + L + + Q+L GV
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 89 YCHRHACIHRDIKPENILLTANGV----VKLCDFGFARLINPGENYTDYVATRWYRAPEL 144
Y H H D+KPENI+L V +K+ DFG A I+ G + + T + APE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 145 LVGDTLYGPAVDVWAI 160
+ + L G D+W+I
Sbjct: 189 VNYEPL-GLEADMWSI 203
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK+++ + + + + ++HPN++ L EV+ K + L+ E L
Sbjct: 42 KFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + + Q+L GV Y H H D+KPENI+L V +K+ D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I+ G + + T + APE++ + L G D+W+I
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 203
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 118
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T T Y PE++ G
Sbjct: 119 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEG 177
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 178 -RMHDEKVDLWSL 189
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 122
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ P T T Y PE++ G
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-CHAPSSRRTTLSGTLDYLPPEMIEG 181
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 182 -RMHDEKVDLWSL 193
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK+++ + + + + ++HPN++ L EV+ K + L+ E L
Sbjct: 42 KFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + + Q+L GV Y H H D+KPENI+L V +K+ D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I+ G + + T + APE++ + L G D+W+I
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 203
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK+++ + + + + ++HPN++ L EV+ K + L+ E L
Sbjct: 41 KFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 100
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + + Q+L GV Y H H D+KPENI+L V +K+ D
Sbjct: 101 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 160
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I+ G + + T + APE++ + L G D+W+I
Sbjct: 161 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 202
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK+++ + + + + ++HPN++ L EV+ K + L+ E L
Sbjct: 42 KFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 101
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + + Q+L GV Y H H D+KPENI+L V +K+ D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I+ G + + T + APE++ + L G D+W+I
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 203
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 5/136 (3%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ ++HPN++ L EV+ K + L+ E L + L + + Q+L GV
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 89 YCHRHACIHRDIKPENILLTANGV----VKLCDFGFARLINPGENYTDYVATRWYRAPEL 144
Y H H D+KPENI+L V +K+ DFG A I+ G + + T + APE+
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEI 188
Query: 145 LVGDTLYGPAVDVWAI 160
+ + L G D+W+I
Sbjct: 189 VNYEPL-GLEADMWSI 203
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK+++ + + + + ++HPN++ L EV+ K + L+ E L
Sbjct: 41 KFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL 100
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + + Q+L GV Y H H D+KPENI+L V +K+ D
Sbjct: 101 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 160
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I+ G + + T + APE++ + L G D+W+I
Sbjct: 161 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 202
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ V EL+ +D + T+ ++ +
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELANAL 126
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T T Y PE++ G
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 186 -RMHDEKVDLWSL 197
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 21/191 (10%)
Query: 28 KRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGV 87
+++ HP LV L F+ + +L V E+ + L LP + + + ++ +
Sbjct: 107 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 166
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATRWYRAPELLV 146
+Y H I+RD+K +N+LL + G +KL D+G + + PG+ + + T Y APE+L
Sbjct: 167 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILR 226
Query: 147 GDTLYGPAVDVWAIEWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILKSDSLDSET 206
G+ YG +VD WA+ + ++ ++ SD+ D T
Sbjct: 227 GED-YGFSVDWWAL-------------------GVLMFEMMAGRSPFDIVGSSDNPDQNT 266
Query: 207 WDLTWQEIFSK 217
D +Q I K
Sbjct: 267 EDYLFQVILEK 277
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 72/134 (53%), Gaps = 2/134 (1%)
Query: 28 KRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGV 87
+++ HP LV L F+ + +L V E+ + L LP + + + ++ +
Sbjct: 75 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 134
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATRWYRAPELLV 146
+Y H I+RD+K +N+LL + G +KL D+G + + PG+ + + T Y APE+L
Sbjct: 135 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 194
Query: 147 GDTLYGPAVDVWAI 160
G+ YG +VD WA+
Sbjct: 195 GED-YGFSVDWWAL 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 21/191 (10%)
Query: 28 KRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGV 87
+++ HP LV L F+ + +L V E+ + L LP + + + ++ +
Sbjct: 64 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 123
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATRWYRAPELLV 146
+Y H I+RD+K +N+LL + G +KL D+G + + PG+ + + T Y APE+L
Sbjct: 124 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 183
Query: 147 GDTLYGPAVDVWAIEWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILKSDSLDSET 206
G+ YG +VD WA+ + ++ ++ SD+ D T
Sbjct: 184 GED-YGFSVDWWAL-------------------GVLMFEMMAGRSPFDIVGSSDNPDQNT 223
Query: 207 WDLTWQEIFSK 217
D +Q I K
Sbjct: 224 EDYLFQVILEK 234
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 14/190 (7%)
Query: 21 EATNKKE---KRSLKHPNLVNLLEVF--RRKKKLHLVFEFCDHTVLNELENHPHG-LPWD 74
EA KKE R L+H N++ L++V K+K+++V E+C + L++ P P
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVC 109
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINP---GENYT 131
Q++ G+ Y H +H+DIKP N+LLT G +K+ G A ++P +
Sbjct: 110 QAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 132 DYVATRWYRAPELLVG-DTLYGPAVDVWAIEWTSHSYSQIGFIGLGNMGSHMARNLLKNN 190
+ ++ PE+ G DT G VD+W+ T ++ + GL L +N
Sbjct: 170 TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNIT----TGLYPFEGDNIYKLFENI 225
Query: 191 GRVTVILKSD 200
G+ + + D
Sbjct: 226 GKGSYAIPGD 235
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHL--VFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRG 86
+ L HPN+V L+EV + HL VFE + + E+ L D + +++G
Sbjct: 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-KPLSEDQARFYFQDLIKG 149
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN-YTDYVATRWYRAPELL 145
+ Y H IHRDIKP N+L+ +G +K+ DFG + + ++ V T + APE L
Sbjct: 150 IEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESL 209
Query: 146 --VGDTLYGPAVDVWAIEWTSHSY 167
G A+DVWA+ T + +
Sbjct: 210 SETRKIFSGKALDVWAMGVTLYCF 233
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 21/191 (10%)
Query: 28 KRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGV 87
+++ HP LV L F+ + +L V E+ + L LP + + + ++ +
Sbjct: 60 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 119
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATRWYRAPELLV 146
+Y H I+RD+K +N+LL + G +KL D+G + + PG+ + + T Y APE+L
Sbjct: 120 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 179
Query: 147 GDTLYGPAVDVWAIEWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILKSDSLDSET 206
G+ YG +VD WA+ + ++ ++ SD+ D T
Sbjct: 180 GED-YGFSVDWWAL-------------------GVLMFEMMAGRSPFDIVGSSDNPDQNT 219
Query: 207 WDLTWQEIFSK 217
D +Q I K
Sbjct: 220 EDYLFQVILEK 230
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
RSL+HPN+V EV L +V E+ L E + D + Q++ GVS
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 89 YCHRHACIHRDIKPENILLTANGV--VKLCDFGFARLINPGENYTDYVATRWYRAPELLV 146
YCH HRD+K EN LL + +K+C FG+++ V T Y APE+L+
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLL 189
Query: 147 GDTLYGPAVDVWA 159
G DVW+
Sbjct: 190 KKEYDGKVADVWS 202
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 124
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T Y PE++ G
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEG 183
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 184 -RMHDEKVDLWSL 195
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 121
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T Y PE++ G
Sbjct: 122 SYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEG 180
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 181 -RMHDEKVDLWSL 192
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P G+ + D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ T+Q+ RG+ Y CIHRD+ N+L+T N V+K+ DFG AR IN + Y +
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 218 NGRLPVKWMAPEALF-DRVYTHQSDVWS 244
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 123
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T Y PE++ G
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEG 182
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 183 -RMHDEKVDLWSL 194
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 123
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ +FG++ + P T T Y PE++ G
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEG 182
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 183 -RMHDEKVDLWSL 194
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
+KHPN+V L +++ L+L+ + L + ++ +QVL V Y
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 91 HRHACIHRDIKPENIL---LTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
H +HRD+KPEN+L L + + + DFG +++ +PG + T Y APE+L
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL-A 191
Query: 148 DTLYGPAVDVWAI 160
Y AVD W+I
Sbjct: 192 QKPYSKAVDCWSI 204
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL-NELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ + F +K+++L+ EF L EL+ H +D + T+ ++ +
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADAL 127
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
YCH IHRDIKPEN+L+ G +K+ DFG++ + P T Y PE++ G
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 148 DTLYGPAVDVW 158
T + VD+W
Sbjct: 187 KT-HDEKVDLW 196
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R +H N+V + + + ++L ++ EF L ++ + L + I + VL+ ++
Sbjct: 97 RDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR-LNEEQIATVCEAVLQALA 155
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGF-ARLINPGENYTDYVATRWYRAPELLVG 147
Y H IHRDIK ++ILLT +G VKL DFGF A++ V T ++ APE ++
Sbjct: 156 YLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPE-VIS 214
Query: 148 DTLYGPAVDVWAI 160
+LY VD+W++
Sbjct: 215 RSLYATEVDIWSL 227
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 122
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T Y PE++ G
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEG 181
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 182 -RMHDEKVDLWSL 193
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 124
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ +FG++ + P T T Y PE++ G
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 184 -RMHDEKVDLWSL 195
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL-NELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ + F +K+++L+ EF L EL+ H +D + T+ ++ +
Sbjct: 72 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADAL 128
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
YCH IHRDIKPEN+L+ G +K+ DFG++ + P T Y PE++ G
Sbjct: 129 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEG 187
Query: 148 DTLYGPAVDVW 158
T + VD+W
Sbjct: 188 KT-HDEKVDLW 197
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
+KHPN+V L +++ L+L+ + L + ++ +QVL V Y
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 91 HRHACIHRDIKPENIL---LTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
H +HRD+KPEN+L L + + + DFG +++ +PG + T Y APE+L
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL-A 191
Query: 148 DTLYGPAVDVWAI 160
Y AVD W+I
Sbjct: 192 QKPYSKAVDCWSI 204
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
+KHPN+V L +++ L+L+ + L + ++ +QVL V Y
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 91 HRHACIHRDIKPENIL---LTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
H +HRD+KPEN+L L + + + DFG +++ +PG + T Y APE+L
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL-A 191
Query: 148 DTLYGPAVDVWAI 160
Y AVD W+I
Sbjct: 192 QKPYSKAVDCWSI 204
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 121
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T Y PE++ G
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEG 180
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 181 -RMHDEKVDLWSL 192
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK+++ + + + + ++HPN++ L EV+ K + L+ E L
Sbjct: 42 KFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGEL 101
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + + Q+L GV Y H H D+KPENI+L V +K+ D
Sbjct: 102 FDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID 161
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I+ G + + T + APE++ + L G D+W+I
Sbjct: 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 203
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 15/144 (10%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLH------LVFEFCD----HTVLNELENHPHGLPWDLIKQ 78
+ L HPN+V+ EV +KL L E+C+ LN+ EN GL I+
Sbjct: 67 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENC-CGLKEGPIRT 125
Query: 79 ITWQVLRGVSYCHRHACIHRDIKPENILLTANG---VVKLCDFGFARLINPGENYTDYVA 135
+ + + Y H + IHRD+KPENI+L + K+ D G+A+ ++ GE T++V
Sbjct: 126 LLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG 185
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA 159
T Y APELL Y VD W+
Sbjct: 186 TLQYLAPELLEQKK-YTVTVDYWS 208
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL-NELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ + F +K+++L+ EF L EL+ H +D + T+ ++ +
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELADAL 127
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
YCH IHRDIKPEN+L+ G +K+ DFG++ + P T Y PE++ G
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEG 186
Query: 148 DTLYGPAVDVW 158
T + VD+W
Sbjct: 187 KT-HDEKVDLW 196
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 15/144 (10%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLH------LVFEFCD----HTVLNELENHPHGLPWDLIKQ 78
+ L HPN+V+ EV +KL L E+C+ LN+ EN GL I+
Sbjct: 68 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENC-CGLKEGPIRT 126
Query: 79 ITWQVLRGVSYCHRHACIHRDIKPENILLTANG---VVKLCDFGFARLINPGENYTDYVA 135
+ + + Y H + IHRD+KPENI+L + K+ D G+A+ ++ GE T++V
Sbjct: 127 LLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG 186
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA 159
T Y APELL Y VD W+
Sbjct: 187 TLQYLAPELLEQKK-YTVTVDYWS 209
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
+KHPN+V L +++ L+L+ + L + ++ +QVL V Y
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 91 HRHACIHRDIKPENIL---LTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
H +HRD+KPEN+L L + + + DFG +++ +PG + T Y APE+L
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVL-A 191
Query: 148 DTLYGPAVDVWAI 160
Y AVD W+I
Sbjct: 192 QKPYSKAVDCWSI 204
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK++S + + + R + HPN++ L +V+ + + L+ E L
Sbjct: 43 KFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGEL 102
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + Q+L GV+Y H H D+KPENI+L + +KL D
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I G + + T + APE++ + L G D+W+I
Sbjct: 163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 204
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 126
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T T Y PE + G
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXIEG 185
Query: 148 DTLYGPAVDVWAI 160
+ VD+W++
Sbjct: 186 RX-HDEKVDLWSL 197
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 124
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T Y PE++ G
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEG 183
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 184 -RMHDEKVDLWSL 195
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ TV EL+ +D + T+ ++ +
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANAL 121
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T Y PE++ G
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEG 180
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 181 -RMHDEKVDLWSL 192
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P G+ + D
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ T+Q+ RG+ Y CIHRD+ N+L+T N V+K+ DFG AR IN + Y
Sbjct: 151 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 210 NGRLPVKWMAPEALF-DRVYTHQSDVWS 236
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P G+ + D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ T+Q+ RG+ Y CIHRD+ N+L+T N V+K+ DFG AR IN + Y
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 218 NGRLPVKWMAPEALF-DRVYTHQSDVWS 244
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P G+ + D
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ T+Q+ RG+ Y CIHRD+ N+L+T N V+K+ DFG AR IN + Y
Sbjct: 205 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 264 NGRLPVKWMAPEALF-DRVYTHQSDVWS 290
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P G+ + D
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ T+Q+ RG+ Y CIHRD+ N+L+T N V+K+ DFG AR IN + Y
Sbjct: 148 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 207 NGRLPVKWMAPEALF-DRVYTHQSDVWS 233
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 13/139 (9%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE----LENHPHGLPWDLIKQITWQVL 84
R LKHPN+V L + + +LVF+ L E E + I+QI L
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI----L 113
Query: 85 RGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPGEN-YTDYVATRWYR 140
V++CH + +HRD+KPEN+LL + VKL DFG A + + + + T Y
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYL 173
Query: 141 APELLVGDTLYGPAVDVWA 159
+PE+L D YG VD+WA
Sbjct: 174 SPEVLRKDP-YGKPVDMWA 191
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P G+ + D
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ T+Q+ RG+ Y CIHRD+ N+L+T N V+K+ DFG AR IN + Y
Sbjct: 146 LV-SCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 205 NGRLPVKWMAPEALF-DRVYTHQSDVWS 231
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGVSY 89
L H N+V++++V +LV E+ + L+E +E+H L D T Q+L G+ +
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKH 126
Query: 90 CHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGE-NYTDYV-ATRWYRAPELLVG 147
H +HRDIKP+NIL+ +N +K+ DFG A+ ++ T++V T Y +PE G
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG 186
Query: 148 DTLYGPAVDVWAI 160
+ D+++I
Sbjct: 187 EAT-DECTDIYSI 198
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 12/147 (8%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCD----HTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
HP +V LL + KL ++ EFC ++ EL+ GL I+ + Q+L ++
Sbjct: 75 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEALN 131
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGF-ARLINPGENYTDYVATRWYRAPELL-- 145
+ H IHRD+K N+L+T G ++L DFG A+ + + ++ T ++ APE++
Sbjct: 132 FLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 146 --VGDTLYGPAVDVWAIEWTSHSYSQI 170
+ DT Y D+W++ T +QI
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQI 218
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITW--QVLRGV 87
L+HPN++ L F +++L+ E+ V EL+ +D + T+ ++ +
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELANAL 126
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
SYCH IHRDIKPEN+LL + G +K+ DFG++ + P T Y PE++ G
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLXGTLDYLPPEMIEG 185
Query: 148 DTLYGPAVDVWAI 160
++ VD+W++
Sbjct: 186 -RMHDEKVDLWSL 197
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGVSY 89
L HP L+NL + F K ++ L+ EF + + + + + + Q G+ +
Sbjct: 105 LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKH 164
Query: 90 CHRHACIHRDIKPENILLTANGV--VKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
H H+ +H DIKPENI+ VK+ DFG A +NP E AT + APE++
Sbjct: 165 MHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR 224
Query: 148 DTLYGPAVDVWAI 160
+ + G D+WAI
Sbjct: 225 EPV-GFYTDMWAI 236
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 76/147 (51%), Gaps = 12/147 (8%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCD----HTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
HP +V LL + KL ++ EFC ++ EL+ GL I+ + Q+L ++
Sbjct: 67 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEALN 123
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGF-ARLINPGENYTDYVATRWYRAPELL-- 145
+ H IHRD+K N+L+T G ++L DFG A+ + + ++ T ++ APE++
Sbjct: 124 FLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 146 --VGDTLYGPAVDVWAIEWTSHSYSQI 170
+ DT Y D+W++ T +QI
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEMAQI 210
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCD----HTVLNELENHPHGLPWDLIKQITWQVLR 85
S HPN+V LL+ F + L ++ EFC V+ ELE L I+ + Q L
Sbjct: 63 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE---RPLTESQIQVVCKQTLD 119
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA--RLINPGENYTDYVATRWYRAPE 143
++Y H + IHRD+K NIL T +G +KL DFG + + ++ T ++ APE
Sbjct: 120 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPE 179
Query: 144 LLVGDT----LYGPAVDVWAIEWTSHSYSQI 170
+++ +T Y DVW++ T ++I
Sbjct: 180 VVMCETSKDRPYDYKADVWSLGITLIEMAEI 210
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 69/139 (49%), Gaps = 13/139 (9%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE----LENHPHGLPWDLIKQITWQVL 84
R LKHPN+V L + + +L+F+ L E E + I+QI L
Sbjct: 76 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI----L 131
Query: 85 RGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFA-RLINPGENYTDYVATRWYR 140
V +CH+ +HRD+KPEN+LL + VKL DFG A + + + + T Y
Sbjct: 132 EAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYL 191
Query: 141 APELLVGDTLYGPAVDVWA 159
+PE+L D YG VD+WA
Sbjct: 192 SPEVLRKDP-YGKPVDLWA 209
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 13/139 (9%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE----LENHPHGLPWDLIKQITWQVL 84
R LKHPN+V L + + +LVF+ L E E + I+QI L
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI----L 113
Query: 85 RGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPGEN-YTDYVATRWYR 140
V++CH + +HRD+KPEN+LL + VKL DFG A + + + + T Y
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYL 173
Query: 141 APELLVGDTLYGPAVDVWA 159
+PE+L D YG VD+WA
Sbjct: 174 SPEVLRKDP-YGKPVDMWA 191
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P G+ + D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ T+Q+ RG+ Y CIHRD+ N+L+T N V+++ DFG AR IN + Y
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 218 NGRLPVKWMAPEALF-DRVYTHQSDVWS 244
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 13 KEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG-L 71
KE +R+ + + L+HP LVNL + F ++ +++EF L E H +
Sbjct: 92 KETVRKEIQTMS-----VLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKM 146
Query: 72 PWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA--NGVVKLCDFGFARLINPGEN 129
D + QV +G+ + H + +H D+KPENI+ T + +KL DFG ++P ++
Sbjct: 147 SEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 206
Query: 130 YTDYVATRWYRAPELLVGDTLYGPAVDVWAIEWTSHSYSQIGFIGLGNMGSHMARNLLKN 189
T + APE+ G + G D+W++ S+ I GL G L+N
Sbjct: 207 VKVTTGTAEFAAPEVAEGKPV-GYYTDMWSVGVLSY----ILLSGLSPFGGENDDETLRN 261
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL--NELENHPHGLPWD--LIKQITWQVLRG 86
LKHP++V LLE + L++VFEF D L ++ G + + Q+L
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 87 VSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFA-RLINPGENYTDYVATRWYRAP 142
+ YCH + IHRD+KP +LL + + VKL FG A +L G V T + AP
Sbjct: 145 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 204
Query: 143 ELLVGDTLYGPAVDVWA 159
E +V YG VDVW
Sbjct: 205 E-VVKREPYGKPVDVWG 220
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG-LPWDLIKQITWQVLRGVSY 89
L+HP LVNL + F ++ +++EF L E H + D + QV +G+ +
Sbjct: 211 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH 270
Query: 90 CHRHACIHRDIKPENILLTA--NGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
H + +H D+KPENI+ T + +KL DFG ++P ++ T + APE+ G
Sbjct: 271 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG 330
Query: 148 DTLYGPAVDVWAIEWTSHSYSQIGFIGLGNMGSHMARNLLKN 189
+ G D+W++ S+ I GL G L+N
Sbjct: 331 KPV-GYYTDMWSVGVLSY----ILLSGLSPFGGENDDETLRN 367
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 40/183 (21%)
Query: 15 AIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLN 62
A++ E + E+ +L H N+VNLL ++L+FE+C + +LN
Sbjct: 79 AVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLN 138
Query: 63 ELENHPHGLPWDLIKQ----------------------ITWQVLRGVSYCHRHACIHRDI 100
L + D I+ +QV +G+ + +C+HRD+
Sbjct: 139 YLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL 198
Query: 101 KPENILLTANGVVKLCDFGFARLINPGENYT----DYVATRWYRAPELLVGDTLYGPAVD 156
N+L+T VVK+CDFG AR I NY + +W APE L + +Y D
Sbjct: 199 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKW-MAPESLF-EGIYTIKSD 256
Query: 157 VWA 159
VW+
Sbjct: 257 VWS 259
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 68/137 (49%), Gaps = 9/137 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL--NELENHPHGLPWD--LIKQITWQVLRG 86
LKHP++V LLE + L++VFEF D L ++ G + + Q+L
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 87 VSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFA-RLINPGENYTDYVATRWYRAP 142
+ YCH + IHRD+KP +LL + + VKL FG A +L G V T + AP
Sbjct: 143 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 143 ELLVGDTLYGPAVDVWA 159
E +V YG VDVW
Sbjct: 203 E-VVKREPYGKPVDVWG 218
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 5/135 (3%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R LKHPN+V L + + +LVF+ L E Q+L V+
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVN 144
Query: 89 YCHRHACIHRDIKPENILLTA---NGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPEL 144
+ H+H +HRD+KPEN+LL + VKL DFG A + + + + T Y +PE+
Sbjct: 145 HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEV 204
Query: 145 LVGDTLYGPAVDVWA 159
L D YG VD+WA
Sbjct: 205 LRKDP-YGKPVDIWA 218
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++ LL + L+++ E+ L E P G+ + D
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ T+Q+ RG+ Y CIHRD+ N+L+T N V+K+ DFG AR IN + Y
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 218 NGRLPVKWMAPEALF-DRVYTHQSDVWS 244
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ + L E P G+ + D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ T+Q+ RG+ Y CIHRD+ N+L+T N V+K+ DFG AR IN + Y
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 218 NGRLPVKWMAPEALF-DRVYTHQSDVWS 244
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 24/149 (16%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P G+ + D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN----PGENY 130
L+ T+Q+ RG+ Y CIHRD+ N+L+T N V+K+ DFG AR IN +
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 131 TDYVATRWYRAPELLVGDTLYGPAVDVWA 159
+ +W APE L D +Y DVW+
Sbjct: 218 NGRLPVKWM-APEALF-DRVYTHQSDVWS 244
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N+++LL + L+++ E+ L E P G+ + D
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ T+Q+ RG+ Y CIHRD+ N+L+T N V+K+ DFG AR IN + Y
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 218 NGRLPVKWMAPEALF-DRVYTHQSDVWS 244
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNX 129
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 189 RSAAVWSL 196
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
RSL+HPN+V EV L +V E+ L E + D + Q++ GVS
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 89 YCHRHACIHRDIKPENILLTANGV--VKLCDFGFARLINPGENYTDYVATRWYRAPELLV 146
Y H HRD+K EN LL + +K+ DFG+++ V T Y APE+L+
Sbjct: 130 YAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLL 189
Query: 147 GDTLYGPAVDVWA 159
G DVW+
Sbjct: 190 KKEYDGKVADVWS 202
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 74 GVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 133
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 192
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 193 RSAAVWSL 200
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK++S + + + R + H N++ L +V+ + + L+ E L
Sbjct: 43 KFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL 102
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + Q+L GV+Y H H D+KPENI+L + +KL D
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I G + + T + APE++ + L G D+W+I
Sbjct: 163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 204
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 134
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 194 RSAAVWSL 201
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK++S + + + R + H N++ L +V+ + + L+ E L
Sbjct: 43 KFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL 102
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + Q+L GV+Y H H D+KPENI+L + +KL D
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I G + + T + APE++ + L G D+W+I
Sbjct: 163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 204
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ + L E P G+ + D
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ T+Q+ RG+ Y CIHRD+ N+L+T N V+K+ DFG AR IN + Y
Sbjct: 159 LV-SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 218 NGRLPVKWMAPEALF-DRVYTHQSDVWS 244
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK++S + + + R + H N++ L +V+ + + L+ E L
Sbjct: 43 KFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL 102
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + Q+L GV+Y H H D+KPENI+L + +KL D
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I G + + T + APE++ + L G D+W+I
Sbjct: 163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 204
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK++S + + + R + H N++ L +V+ + + L+ E L
Sbjct: 43 KFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL 102
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + Q+L GV+Y H H D+KPENI+L + +KL D
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I G + + T + APE++ + L G D+W+I
Sbjct: 163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 204
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 5/163 (3%)
Query: 2 RFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL 61
+F KK++S + + + R + H N++ L +V+ + + L+ E L
Sbjct: 43 KFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL 102
Query: 62 NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV----VKLCD 117
+ L + Q+L GV+Y H H D+KPENI+L + +KL D
Sbjct: 103 FDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLID 162
Query: 118 FGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
FG A I G + + T + APE++ + L G D+W+I
Sbjct: 163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSI 204
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 134
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 194 RSAAVWSL 201
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 75 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 134
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 135 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 193
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 194 RSAAVWSL 201
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 74 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 133
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 134 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 192
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 193 RSAAVWSL 200
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 69/139 (49%), Gaps = 13/139 (9%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE----LENHPHGLPWDLIKQITWQVL 84
R LKHPN+V L + + +L+F+ L E E + I+QI L
Sbjct: 65 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQI----L 120
Query: 85 RGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFA-RLINPGENYTDYVATRWYR 140
V +CH+ +HR++KPEN+LL + VKL DFG A + + + + T Y
Sbjct: 121 EAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYL 180
Query: 141 APELLVGDTLYGPAVDVWA 159
+PE+L D YG VD+WA
Sbjct: 181 SPEVLRKDP-YGKPVDLWA 198
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 236 RSAAVWSL 243
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 222 RSAAVWSL 229
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 97 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 156
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 157 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 215
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 216 RSAAVWSL 223
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 73 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 132
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 133 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 191
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 192 RSAAVWSL 199
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 221 RSAAVWSL 228
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 221 RSAAVWSL 228
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 222 RSAAVWSL 229
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 222 RSAAVWSL 229
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 149
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 209 RSAAVWSL 216
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 122 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 181
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 182 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 240
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 241 RSAAVWSL 248
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 148
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 207
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 208 RSAAVWSL 215
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 103 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 162
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 163 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 221
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 222 RSAAVWSL 229
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 221 RSAAVWSL 228
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 109 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 168
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 169 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 227
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 228 RSAAVWSL 235
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 129
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 189 RSAAVWSL 196
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 236 RSAAVWSL 243
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 177 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 235
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 236 RSAAVWSL 243
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 149
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 209 RSAAVWSL 216
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 70 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 129
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 130 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 188
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 189 RSAAVWSL 196
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 74 DLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDY 133
DLI ++QV RG+ + CIHRD+ NILL+ N VVK+CDFG AR I +Y
Sbjct: 200 DLI-SYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 134 VATRW---YRAPELLVGDTLYGPAVDVWA 159
TR + APE + D +Y DVW+
Sbjct: 259 GDTRLPLKWMAPESIF-DKIYSTKSDVWS 286
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 102 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 161
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 162 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 220
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 221 RSAAVWSL 228
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 89 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 148
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 149 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 207
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 208 RSAAVWSL 215
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTV-LNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
++ LL+ F R L+ E + L + L +L + WQVL V +CH
Sbjct: 90 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 149
Query: 94 ACIHRDIKPENILLTAN-GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
+HRDIK ENIL+ N G +KL DFG L+ YTD+ TR Y PE + +G
Sbjct: 150 GVLHRDIKDENILIDLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHG 208
Query: 153 PAVDVWAI 160
+ VW++
Sbjct: 209 RSAAVWSL 216
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 87/161 (54%), Gaps = 10/161 (6%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKH----PNLVNLLEVFRRKKKLHLVFEFCDHTVLN 62
KK++ ++A + TE T + E++ L+H P LV L F+ + KLHL+ ++ + L
Sbjct: 91 KKATIVQKA--KTTEHT-RTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELF 147
Query: 63 ELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFAR 122
+ ++ +++ + + H+ I+RDIK ENILL +NG V L DFG ++
Sbjct: 148 THLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK 207
Query: 123 --LINPGENYTDYVATRWYRAPELL-VGDTLYGPAVDVWAI 160
+ + E D+ T Y AP+++ GD+ + AVD W++
Sbjct: 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSL 248
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGL--PWDL------------ 75
KH N++NLL + L+++ E+ L E P G+ +D+
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 76 IKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN----PGENYT 131
+ T+Q+ RG+ Y CIHRD+ N+L+T N V+K+ DFG AR IN +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 132 DYVATRWYRAPELLVGDTLYGPAVDVWA 159
+ +W APE L D +Y DVW+
Sbjct: 219 GRLPVKWM-APEALF-DRVYTHQSDVWS 244
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 24/150 (16%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL-----ENHPHGLPWDLIKQITWQVLR 85
L+ N V + ++K L + E+C++ L +L N W L +QI L
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQI----LE 127
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-------------PG--ENY 130
+SY H IHRD+KP NI + + VK+ DFG A+ ++ PG +N
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 131 TDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
T + T Y A E+L G Y +D++++
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSL 217
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R +KH N+V L +++ L+LV + L + + QVL V
Sbjct: 75 RKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVY 134
Query: 89 YCHRHACIHRDIKPENILLTAN---GVVKLCDFGFARLINPGENYTDYVATRWYRAPELL 145
Y HR +HRD+KPEN+L + + + DFG +++ G+ + T Y APE+L
Sbjct: 135 YLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVL 194
Query: 146 VGDTLYGPAVDVWAI 160
Y AVD W+I
Sbjct: 195 -AQKPYSKAVDCWSI 208
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 24/150 (16%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL-----ENHPHGLPWDLIKQITWQVLR 85
L+ N V + ++K L + E+C++ L +L N W L +QI L
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQI----LE 127
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-------------PG--ENY 130
+SY H IHRD+KP NI + + VK+ DFG A+ ++ PG +N
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 131 TDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
T + T Y A E+L G Y +D++++
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSL 217
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHR 92
HP ++ + F+ +++ ++ ++ + L L P + K +V + Y H
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 124
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYG 152
I+RD+KPENILL NG +K+ DFGFA+ + P Y T Y APE +V Y
Sbjct: 125 KDIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVTYX-LCGTPDYIAPE-VVSTKPYN 181
Query: 153 PAVDVWAI 160
++D W+
Sbjct: 182 KSIDWWSF 189
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
++L+H ++ L V K+ +V E+C L + L + + + Q++ V+
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVA 122
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY--TDYVATRWYRAPELLV 146
Y H HRD+KPEN+L +KL DFG ++Y + Y APEL+
Sbjct: 123 YVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQ 182
Query: 147 GDTLYGPAVDVWAI 160
G + G DVW++
Sbjct: 183 GKSYLGSEADVWSM 196
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 22/149 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P GL + D
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ +QV RG+ Y CIHRD+ N+L+T + V+K+ DFG AR I+ + Y
Sbjct: 193 LV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWAI 160
R + APE L D +Y DVW+
Sbjct: 252 NGRLPVKWMAPEALF-DRIYTHQSDVWSF 279
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P GL + D
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ +QV RG+ Y CIHRD+ N+L+T + V+K+ DFG AR I+ + Y
Sbjct: 144 LV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 203 NGRLPVKWMAPEALF-DRIYTHQSDVWS 229
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P GL + D
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ +QV RG+ Y CIHRD+ N+L+T + V+K+ DFG AR I+ + Y
Sbjct: 152 LV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 211 NGRLPVKWMAPEALF-DRIYTHQSDVWS 237
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 14/146 (9%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELEN------HPHG-LPWDLIKQITWQVL 84
HPN+V+ F K +L LV + +VL+ +++ H G L I I +VL
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT------DYVATRW 138
G+ Y H++ IHRD+K NILL +G V++ DFG + + G + T +V T
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 139 YRAPELLVGDTLYGPAVDVWAIEWTS 164
+ APE++ Y D+W+ T+
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITA 217
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P GL + D
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ +QV RG+ Y CIHRD+ N+L+T + V+K+ DFG AR I+ + Y
Sbjct: 141 LV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 200 NGRLPVKWMAPEALF-DRIYTHQSDVWS 226
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P GL + D
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ +QV RG+ Y CIHRD+ N+L+T + V+K+ DFG AR I+ + Y
Sbjct: 152 LV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 211 NGRLPVKWMAPEALF-DRIYTHQSDVWS 237
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLH--LVFEFCD----HTVLNELENHPHGLPWDLIKQITWQ 82
+ L H N+V L + H L+ EFC +TVL E N +GLP +
Sbjct: 62 KKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRD 120
Query: 83 VLRGVSYCHRHACIHRDIKPENILLT----ANGVVKLCDFGFARLINPGENYTDYVATRW 138
V+ G+++ + +HR+IKP NI+ V KL DFG AR + E + T
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEE 180
Query: 139 YRAPELLVGDTL-------YGPAVDVWAIEWT 163
Y P++ L YG VD+W+I T
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVT 212
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P GL + D
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ +QV RG+ Y CIHRD+ N+L+T + V+K+ DFG AR I+ + Y
Sbjct: 145 LV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 204 NGRLPVKWMAPEALF-DRIYTHQSDVWS 230
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQI---TWQVLR 85
+ LKH N+V L F + + E L+ L G D + I T Q+L
Sbjct: 74 KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE 133
Query: 86 GVSYCHRHACIHRDIKPENILL-TANGVVKLCDFGFARL---INP-GENYTDYVATRWYR 140
G+ Y H + +HRDIK +N+L+ T +GV+K+ DFG ++ INP E +T T Y
Sbjct: 134 GLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYM 190
Query: 141 APELL-VGDTLYGPAVDVWAIEWT 163
APE++ G YG A D+W++ T
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCT 214
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKL----HLVFEFC 56
LR + + S+Y R+A A +L HP +V + + + ++V E+
Sbjct: 45 LRADLARDPSFYLRFRREAQNAA------ALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 57 DHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLC 116
D L ++ + + ++ + +++ H++ IHRD+KP NIL++A VK+
Sbjct: 99 DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVV 158
Query: 117 DFGFARLINPGENYTDYVA----TRWYRAPELLVGDTL 150
DFG AR I N A T Y +PE GD++
Sbjct: 159 DFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV 196
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 14/146 (9%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELEN------HPHG-LPWDLIKQITWQVL 84
HPN+V+ F K +L LV + +VL+ +++ H G L I I +VL
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT------DYVATRW 138
G+ Y H++ IHRD+K NILL +G V++ DFG + + G + T +V T
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 139 YRAPELLVGDTLYGPAVDVWAIEWTS 164
+ APE++ Y D+W+ T+
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITA 212
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKL----HLVFEFC 56
LR + + S+Y R+A A +L HP +V + + + ++V E+
Sbjct: 62 LRADLARDPSFYLRFRREAQNAA------ALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 115
Query: 57 DHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLC 116
D L ++ + + ++ + +++ H++ IHRD+KP NI+++A VK+
Sbjct: 116 DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVM 175
Query: 117 DFGFARLI-NPGENYTDYVA---TRWYRAPELLVGDTL 150
DFG AR I + G + T A T Y +PE GD++
Sbjct: 176 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 213
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 43 FRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIK 101
+ + KL ++ E+ + L+ LE P L I I ++L+G+ Y H IHRDIK
Sbjct: 94 YLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSEKKIHRDIK 151
Query: 102 PENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
N+LL+ +G VKL DFG A +L + +V T ++ APE ++ + Y D+W++
Sbjct: 152 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIKQSAYDSKADIWSL 210
Query: 161 EWTS 164
T+
Sbjct: 211 GITA 214
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P GL + D
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ +QV RG+ Y CIHRD+ N+L+T + V+K+ DFG AR I+ + Y
Sbjct: 152 LV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 211 NGRLPVKWMAPEALF-DRIYTHQSDVWS 237
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P GL + D
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
L+ +QV RG+ Y CIHRD+ N+L+T + V+K+ DFG AR I+ + Y
Sbjct: 137 LV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 135 ATRW---YRAPELLVGDTLYGPAVDVWA 159
R + APE L D +Y DVW+
Sbjct: 196 NGRLPVKWMAPEALF-DRIYTHQSDVWS 222
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKL----HLVFEFC 56
LR + + S+Y R+A A +L HP +V + + + ++V E+
Sbjct: 45 LRADLARDPSFYLRFRREAQNAA------ALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 57 DHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLC 116
D L ++ + + ++ + +++ H++ IHRD+KP NI+++A VK+
Sbjct: 99 DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVM 158
Query: 117 DFGFARLI-NPGENYTDYVA---TRWYRAPELLVGDTL 150
DFG AR I + G + T A T Y +PE GD++
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 6/134 (4%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGL-PWDLIKQITWQVLRGVSY 89
L HP LV L V + + LVFEF +H L++ GL + + + V G++Y
Sbjct: 59 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 118
Query: 90 CHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLV 146
+ IHRD+ N L+ N V+K+ DFG R + + YT T++ + +PE+
Sbjct: 119 LEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF- 176
Query: 147 GDTLYGPAVDVWAI 160
+ Y DVW+
Sbjct: 177 SFSRYSSKSDVWSF 190
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKL----HLVFEFC 56
LR + + S+Y R+A A +L HP +V + + + ++V E+
Sbjct: 45 LRADLARDPSFYLRFRREAQNAA------ALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 57 DHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLC 116
D L ++ + + ++ + +++ H++ IHRD+KP NI+++A VK+
Sbjct: 99 DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVM 158
Query: 117 DFGFARLI-NPGENYTDYVA---TRWYRAPELLVGDTL 150
DFG AR I + G + T A T Y +PE GD++
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKL----HLVFEFC 56
LR + + S+Y R+A A +L HP +V + + + ++V E+
Sbjct: 45 LRADLARDPSFYLRFRREAQNAA------ALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 57 DHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLC 116
D L ++ + + ++ + +++ H++ IHRD+KP NI+++A VK+
Sbjct: 99 DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVM 158
Query: 117 DFGFARLI-NPGENYTDYVA---TRWYRAPELLVGDTL 150
DFG AR I + G + T A T Y +PE GD++
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQI---TWQVLR 85
+ LKH N+V L F + + E L+ L G D + I T Q+L
Sbjct: 60 KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE 119
Query: 86 GVSYCHRHACIHRDIKPENILL-TANGVVKLCDFGFARL---INP-GENYTDYVATRWYR 140
G+ Y H + +HRDIK +N+L+ T +GV+K+ DFG ++ INP E +T T Y
Sbjct: 120 GLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYM 176
Query: 141 APELL-VGDTLYGPAVDVWAIEWT 163
APE++ G YG A D+W++ T
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCT 200
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 79/188 (42%), Gaps = 31/188 (16%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKK-KLH 50
F K ++ A++ E E R+L H N+VNLL + L
Sbjct: 50 FGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 109
Query: 51 LVFEFCD----HTVLNELENH--PHGLPWDLIKQI---------TWQVLRGVSYCHRHAC 95
++ EFC T L N P+ P DL K ++QV +G+ + C
Sbjct: 110 VIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC 169
Query: 96 IHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLVGDTLYG 152
IHRD+ NILL+ VVK+CDFG AR I + R + APE + D +Y
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF-DRVYT 228
Query: 153 PAVDVWAI 160
DVW+
Sbjct: 229 IQSDVWSF 236
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITW----QVL 84
+ L HPN++ F +L++V E D L+ + H + ++ W Q+
Sbjct: 87 KQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC 146
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT-DYVATRWYRAPE 143
+ + H +HRDIKP N+ +TA GVVKL D G R + V T +Y +PE
Sbjct: 147 SALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 206
Query: 144 LLVGDTLYGPAVDVWAI 160
+ + Y D+W++
Sbjct: 207 -RIHENGYNFKSDIWSL 222
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGL-PWDLIKQITWQVLRGVSY 89
L HP LV L V + + LVFEF +H L++ GL + + + V G++Y
Sbjct: 59 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 118
Query: 90 CHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLV 146
IHRD+ N L+ N V+K+ DFG R + + YT T++ + +PE+
Sbjct: 119 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF- 176
Query: 147 GDTLYGPAVDVWAI 160
+ Y DVW+
Sbjct: 177 SFSRYSSKSDVWSF 190
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 43 FRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIK 101
+ + KL ++ E+ + L+ LE P L I I ++L+G+ Y H IHRDIK
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 102 PENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
N+LL+ +G VKL DFG A +L + +V T ++ APE ++ + Y D+W++
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIKQSAYDSKADIWSL 190
Query: 161 EWTS 164
T+
Sbjct: 191 GITA 194
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 68/152 (44%), Gaps = 18/152 (11%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLH--LVFEFCD----HTVLNELENHPHGLPWDLIKQITWQ 82
+ L H N+V L + H L+ EFC +TVL E N +GLP +
Sbjct: 62 KKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRD 120
Query: 83 VLRGVSYCHRHACIHRDIKPENILLT----ANGVVKLCDFGFARLINPGENYTDYVATRW 138
V+ G+++ + +HR+IKP NI+ V KL DFG AR + E + T
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEE 180
Query: 139 YRAPELLVGDTL-------YGPAVDVWAIEWT 163
Y P++ L YG VD+W+I T
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVT 212
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 43 FRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIK 101
+ + KL ++ E+ + L+ LE P L I I ++L+G+ Y H IHRDIK
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 102 PENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
N+LL+ +G VKL DFG A +L + +V T ++ APE ++ + Y D+W++
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDSKADIWSL 190
Query: 161 EWTS 164
T+
Sbjct: 191 GITA 194
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGL-PWDLIKQITWQVLRGVSY 89
L HP LV L V + + LVFEF +H L++ GL + + + V G++Y
Sbjct: 57 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 116
Query: 90 CHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLV 146
IHRD+ N L+ N V+K+ DFG R + + YT T++ + +PE+
Sbjct: 117 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF- 174
Query: 147 GDTLYGPAVDVWA---IEWTSHSYSQIGF 172
+ Y DVW+ + W S +I +
Sbjct: 175 SFSRYSSKSDVWSFGVLMWEVFSEGKIPY 203
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 5/124 (4%)
Query: 43 FRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIK 101
+ + KL ++ E+ + L+ LE P L I I ++L+G+ Y H IHRDIK
Sbjct: 89 YLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLHSEKKIHRDIK 146
Query: 102 PENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
N+LL+ +G VKL DFG A +L + +V T ++ APE ++ + Y D+W++
Sbjct: 147 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAYDSKADIWSL 205
Query: 161 EWTS 164
T+
Sbjct: 206 GITA 209
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 13/139 (9%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE----LENHPHGLPWDLIKQITWQVL 84
R LKH N+V L + + +LVF+ L E E + I+QI L
Sbjct: 58 RLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI----L 113
Query: 85 RGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPGEN-YTDYVATRWYR 140
V +CH+ +HRD+KPEN+LL + VKL DFG A + + + + T Y
Sbjct: 114 EAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYL 173
Query: 141 APELLVGDTLYGPAVDVWA 159
+PE+L + YG VD+WA
Sbjct: 174 SPEVLRKEA-YGKPVDIWA 191
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGL-PWDLIKQITWQVLRGVSY 89
L HP LV L V + + LVFEF +H L++ GL + + + V G++Y
Sbjct: 79 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 138
Query: 90 CHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLV 146
IHRD+ N L+ N V+K+ DFG R + + YT T++ + +PE+
Sbjct: 139 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF- 196
Query: 147 GDTLYGPAVDVWA---IEWTSHSYSQIGF 172
+ Y DVW+ + W S +I +
Sbjct: 197 SFSRYSSKSDVWSFGVLMWEVFSEGKIPY 225
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 6/134 (4%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGL-PWDLIKQITWQVLRGVSY 89
L HP LV L V + + LVFEF +H L++ GL + + + V G++Y
Sbjct: 62 LSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 121
Query: 90 CHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLV 146
IHRD+ N L+ N V+K+ DFG R + + YT T++ + +PE+
Sbjct: 122 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF- 179
Query: 147 GDTLYGPAVDVWAI 160
+ Y DVW+
Sbjct: 180 SFSRYSSKSDVWSF 193
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
+H N+++L E F ++L ++FEF + + L I QV + +
Sbjct: 59 RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFL 118
Query: 91 HRHACIHRDIKPENILLTA--NGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGD 148
H H H DI+PENI+ + +K+ +FG AR + PG+N+ Y APE+ D
Sbjct: 119 HSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHD 178
Query: 149 TLYGPAVDVWAI 160
+ A D+W++
Sbjct: 179 VV-STATDMWSL 189
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 16 IRQATEATNKKEKRSL----KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGL 71
+R A + + K +R++ KHP +V+L+ F+ KL+L+ E+ L
Sbjct: 59 VRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIF 118
Query: 72 PWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFAR-LINPGENY 130
D ++ + + H+ I+RD+KPENI+L G VKL DFG + I+ G
Sbjct: 119 MEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT 178
Query: 131 TDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+ T Y APE+L+ + + AVD W++
Sbjct: 179 HXFCGTIEYMAPEILM-RSGHNRAVDWWSL 207
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKL----HLVFEFC 56
LR + + S+Y R+A A +L HP +V + + ++V E+
Sbjct: 45 LRADLARDPSFYLRFRREAQNAA------ALNHPAIVAVYATGEAETPAGPLPYIVMEYV 98
Query: 57 DHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLC 116
D L ++ + + ++ + +++ H++ IHRD+KP NI+++A VK+
Sbjct: 99 DGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVM 158
Query: 117 DFGFARLI-NPGENYTDYVA---TRWYRAPELLVGDTL 150
DFG AR I + G + T A T Y +PE GD++
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 16 IRQATEATNKKEKRSL----KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGL 71
+R A + + K +R++ KHP +V+L+ F+ KL+L+ E+ L
Sbjct: 59 VRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIF 118
Query: 72 PWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFAR-LINPGENY 130
D ++ + + H+ I+RD+KPENI+L G VKL DFG + I+ G
Sbjct: 119 MEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT 178
Query: 131 TDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+ T Y APE+L+ + + AVD W++
Sbjct: 179 HTFCGTIEYMAPEILM-RSGHNRAVDWWSL 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 183 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 81/189 (42%), Gaps = 32/189 (16%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKK-KLH 50
F K ++ A++ E E R+L H N+VNLL + L
Sbjct: 86 FGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 145
Query: 51 LVFEFCD----HTVLNELENH--PHGL-PWDLIKQI---------TWQVLRGVSYCHRHA 94
++ EFC T L N P+ + P DL K ++QV +G+ +
Sbjct: 146 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 205
Query: 95 CIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLVGDTLY 151
CIHRD+ NILL+ VVK+CDFG AR I +Y R + APE + D +Y
Sbjct: 206 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVY 264
Query: 152 GPAVDVWAI 160
DVW+
Sbjct: 265 TIQSDVWSF 273
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 209 KSA-SKSSDLWAL 220
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 183 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 34 PNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPW--------DLIKQITWQVLR 85
P ++NL EV+ ++ L+ E+ + L LP D+I+ I Q+L
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSL-----CLPELAEMVSENDVIRLIK-QILE 142
Query: 86 GVSYCHRHACIHRDIKPENILLTAN---GVVKLCDFGFARLINPGENYTDYVATRWYRAP 142
GV Y H++ +H D+KP+NILL++ G +K+ DFG +R I + + T Y AP
Sbjct: 143 GVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAP 202
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+L D + A D+W I
Sbjct: 203 EILNYDPI-TTATDMWNI 219
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 14 EAIRQATEATNKKEK--RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGL 71
E I Q E ++ K LKHPN++ L V ++ L LV EF LN + + +
Sbjct: 44 EDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR-I 102
Query: 72 PWDLIKQITWQVLRGVSYCHRHA---CIHRDIKPENILL--------TANGVVKLCDFGF 120
P D++ Q+ RG++Y H A IHRD+K NIL+ +N ++K+ DFG
Sbjct: 103 PPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162
Query: 121 ARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWA 159
AR + + A W APE++ +++ DVW+
Sbjct: 163 AREWHRTTKMSAAGAYAWM-APEVIRA-SMFSKGSDVWS 199
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 15 AIRQATEATNKKEK----RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG 70
+ R+A A N + + + L HP ++ + F + ++V E + L +
Sbjct: 191 SAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR 249
Query: 71 LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPG 127
L K +Q+L V Y H + IHRD+KPEN+LL++ + ++K+ DFG ++++
Sbjct: 250 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 309
Query: 128 ENYTDYVATRWYRAPELL--VGDTLYGPAVDVWAI 160
T Y APE+L VG Y AVD W++
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 344
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 81/189 (42%), Gaps = 32/189 (16%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKK-KLH 50
F K ++ A++ E E R+L H N+VNLL + L
Sbjct: 49 FGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 108
Query: 51 LVFEFCD----HTVLNELENH--PHGL-PWDLIKQI---------TWQVLRGVSYCHRHA 94
++ EFC T L N P+ + P DL K ++QV +G+ +
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 168
Query: 95 CIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLVGDTLY 151
CIHRD+ NILL+ VVK+CDFG AR I +Y R + APE + D +Y
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVY 227
Query: 152 GPAVDVWAI 160
DVW+
Sbjct: 228 TIQSDVWSF 236
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 15 AIRQATEATNKKEK----RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG 70
+ R+A A N + + + L HP ++ + F + ++V E + L +
Sbjct: 52 SAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR 110
Query: 71 LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPG 127
L K +Q+L V Y H + IHRD+KPEN+LL++ + ++K+ DFG ++++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 128 ENYTDYVATRWYRAPELL--VGDTLYGPAVDVWAI 160
T Y APE+L VG Y AVD W++
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 45 RKKKLHLVFEFCDHTVLNELENHPHGLPWD--LIKQITWQVLRGVSYCHRHACIHRDIKP 102
+ K L + EFCD L + G D L ++ Q+ +GV Y H IHRD+KP
Sbjct: 105 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKP 164
Query: 103 ENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
NI L VK+ DFG + T T Y +PE + YG VD++A+
Sbjct: 165 SNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQD-YGKEVDLYAL 221
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 128
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 129 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 188 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 15 AIRQATEATNKKEK----RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG 70
+ R+A A N + + + L HP ++ + F + ++V E + L +
Sbjct: 52 SAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR 110
Query: 71 LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPG 127
L K +Q+L V Y H + IHRD+KPEN+LL++ + ++K+ DFG ++++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 128 ENYTDYVATRWYRAPELL--VGDTLYGPAVDVWAI 160
T Y APE+L VG Y AVD W++
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 183 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 183 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 15 AIRQATEATNKKEK----RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG 70
+ R+A A N + + + L HP ++ + F + ++V E + L +
Sbjct: 51 SAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR 109
Query: 71 LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPG 127
L K +Q+L V Y H + IHRD+KPEN+LL++ + ++K+ DFG ++++
Sbjct: 110 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 169
Query: 128 ENYTDYVATRWYRAPELL--VGDTLYGPAVDVWAI 160
T Y APE+L VG Y AVD W++
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 204
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 129 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 188 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 15 AIRQATEATNKKEK----RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG 70
+ R+A A N + + + L HP ++ + F + ++V E + L +
Sbjct: 52 SAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR 110
Query: 71 LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPG 127
L K +Q+L V Y H + IHRD+KPEN+LL++ + ++K+ DFG ++++
Sbjct: 111 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 128 ENYTDYVATRWYRAPELL--VGDTLYGPAVDVWAI 160
T Y APE+L VG Y AVD W++
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 205
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 15 AIRQATEATNKKEK----RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG 70
+ R+A A N + + + L HP ++ + F + ++V E + L +
Sbjct: 58 SAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR 116
Query: 71 LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPG 127
L K +Q+L V Y H + IHRD+KPEN+LL++ + ++K+ DFG ++++
Sbjct: 117 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 176
Query: 128 ENYTDYVATRWYRAPELL--VGDTLYGPAVDVWAI 160
T Y APE+L VG Y AVD W++
Sbjct: 177 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 211
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 15 AIRQATEATNKKEK----RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG 70
+ R+A A N + + + L HP ++ + F + ++V E + L +
Sbjct: 177 SAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR 235
Query: 71 LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPG 127
L K +Q+L V Y H + IHRD+KPEN+LL++ + ++K+ DFG ++++
Sbjct: 236 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 295
Query: 128 ENYTDYVATRWYRAPELL--VGDTLYGPAVDVWAI 160
T Y APE+L VG Y AVD W++
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 330
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 180 KRREFHAEPVDVWS 193
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 81/189 (42%), Gaps = 32/189 (16%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKK-KLH 50
F K ++ A++ E E R+L H N+VNLL + L
Sbjct: 40 FGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 99
Query: 51 LVFEFCD----HTVLNELENH--PHGL-PWDLIKQI---------TWQVLRGVSYCHRHA 94
++ EFC T L N P+ + P DL K ++QV +G+ +
Sbjct: 100 VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 159
Query: 95 CIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLVGDTLY 151
CIHRD+ NILL+ VVK+CDFG AR I +Y R + APE + D +Y
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVY 218
Query: 152 GPAVDVWAI 160
DVW+
Sbjct: 219 TIQSDVWSF 227
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 81/189 (42%), Gaps = 32/189 (16%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKK-KLH 50
F K ++ A++ E E R+L H N+VNLL + L
Sbjct: 40 FGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 99
Query: 51 LVFEFCD----HTVLNELENH--PHGL-PWDLIKQI---------TWQVLRGVSYCHRHA 94
++ EFC T L N P+ + P DL K ++QV +G+ +
Sbjct: 100 VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 159
Query: 95 CIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLVGDTLY 151
CIHRD+ NILL+ VVK+CDFG AR I +Y R + APE + D +Y
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVY 218
Query: 152 GPAVDVWAI 160
DVW+
Sbjct: 219 TIQSDVWSF 227
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 179 KRREFHAEPVDVWS 192
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 79/190 (41%), Gaps = 34/190 (17%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKK-KLH 50
F K ++ A++ E E R+L H N+VNLL + L
Sbjct: 51 FGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 110
Query: 51 LVFEFCDHTVL--------NELENHPHGLPWDLIKQI---------TWQVLRGVSYCHRH 93
++ EFC L NE + P DL K ++QV +G+ +
Sbjct: 111 VIVEFCKFGNLSTYLRSKRNEFVPYKEA-PEDLYKDFLTLEHLICYSFQVAKGMEFLASR 169
Query: 94 ACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLVGDTL 150
CIHRD+ NILL+ VVK+CDFG AR I +Y R + APE + D +
Sbjct: 170 KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRV 228
Query: 151 YGPAVDVWAI 160
Y DVW+
Sbjct: 229 YTIQSDVWSF 238
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 24/149 (16%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENHPHGLPW---------------D 74
KH N++NLL + L+++ E+ L E P GL + D
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN----PGENY 130
L+ +QV RG+ Y CIHRD+ N+L+T + V+K+ DFG AR I+ +
Sbjct: 152 LV-SCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 131 TDYVATRWYRAPELLVGDTLYGPAVDVWA 159
+ +W APE L D +Y DVW+
Sbjct: 211 NGRLPVKWM-APEALF-DRIYTHQSDVWS 237
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEK--RSLKHPNLVNLLEVFRR----KKKLHLVFEFC 56
FNK+ + + + ++ +A + E R+ + P++V +++V+ +K L +V E
Sbjct: 36 FNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 95
Query: 57 DH-TVLNELENH-PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NG 111
D + + +++ +I + + Y H HRD+KPEN+L T+ N
Sbjct: 96 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 155
Query: 112 VVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
++KL DFGFA+ + T+ T +Y APE+L G Y + D+W++
Sbjct: 156 ILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVL-GPEKYDKSCDMWSL 203
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 71/179 (39%), Gaps = 48/179 (26%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL--------------------------- 61
+ L HPN+ L EV+ ++ + LV E C L
Sbjct: 83 KKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPC 142
Query: 62 ---NE--LENHPHGLPWDL--------IKQITWQVLRGVSYCHRHACIHRDIKPENILLT 108
NE + HG L I I Q+ + Y H HRDIKPEN L +
Sbjct: 143 PECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFS 202
Query: 109 ANGV--VKLCDFGFAR---LINPGENY--TDYVATRWYRAPELL-VGDTLYGPAVDVWA 159
N +KL DFG ++ +N GE Y T T ++ APE+L + YGP D W+
Sbjct: 203 TNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 179 KRREFHAEPVDVWS 192
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 180 KRREFHAEPVDVWS 193
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 180 KRREFHAEPVDVWS 193
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 180 KRREFHAEPVDVWS 193
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 146 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 206 KSA-CKSSDLWAL 217
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 6/129 (4%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTVLNELE-NHPHGLPWDLIKQITWQVLRGVSYCHRH 93
N++++LE F + + + FE + ++ N G L+++ +L+ + H++
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219
Query: 94 ACIHRDIKPENILLTANGV--VKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLY 151
IH D+KPENILL G +K+ DFG + YT + +R+YRAPE+++G Y
Sbjct: 220 RIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYT-XIQSRFYRAPEVILG-ARY 276
Query: 152 GPAVDVWAI 160
G +D+W++
Sbjct: 277 GMPIDMWSL 285
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 179 KRREFHAEPVDVWS 192
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 179 KRREFHAEPVDVWS 192
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 71/129 (55%), Gaps = 6/129 (4%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTVLNELE-NHPHGLPWDLIKQITWQVLRGVSYCHRH 93
N++++LE F + + + FE + ++ N G L+++ +L+ + H++
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219
Query: 94 ACIHRDIKPENILLTANGV--VKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLY 151
IH D+KPENILL G +K+ DFG + YT + +R+YRAPE+++G Y
Sbjct: 220 RIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYT-XIQSRFYRAPEVILG-ARY 276
Query: 152 GPAVDVWAI 160
G +D+W++
Sbjct: 277 GMPIDMWSL 285
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 209 KSAXK-SSDLWAL 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 129 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 188 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 179 KRREFHAEPVDVWS 192
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 58 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 117
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 118 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 178 KRREFHAEPVDVWS 191
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 126 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 184
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 185 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 218
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 179 KRREFHAEPVDVWS 192
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 180 KRREFHAEPVDVWS 193
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 179 KRREFHAEPVDVWS 192
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 77 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 136
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 137 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 195
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 196 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 229
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 179 KRREFHAEPVDVWS 192
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 180 KRREFHAEPVDVWS 193
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 179 KRREFHAEPVDVWS 192
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 126 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 184
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 185 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 218
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 71/129 (55%), Gaps = 6/129 (4%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTVLNELE-NHPHGLPWDLIKQITWQVLRGVSYCHRH 93
N++++LE F + + + FE + ++ N G L+++ +L+ + H++
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN 219
Query: 94 ACIHRDIKPENILLTANGV--VKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLY 151
IH D+KPENILL G +K+ DFG + + + + +R+YRAPE+++G Y
Sbjct: 220 RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH--QRVYXXIQSRFYRAPEVILG-ARY 276
Query: 152 GPAVDVWAI 160
G +D+W++
Sbjct: 277 GMPIDMWSL 285
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 149
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 150 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 210 KSACK-SSDLWAL 221
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 183 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 129 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 187
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 188 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 27/182 (14%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKKKLHL 51
F K+ + K A++ + EK +L +H N+VNLL + +
Sbjct: 60 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV 119
Query: 52 VFEFCDH-TVLNELE-------NHPHGLPWDL--IKQITWQVLRGVSYCHRHACIHRDIK 101
+ E+C + +LN L + G P +L + + QV +G+++ CIHRD+
Sbjct: 120 ITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVA 179
Query: 102 PENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDV 157
N+LLT V K+ DFG AR I NY + +W APE + D +Y DV
Sbjct: 180 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW-MAPESIF-DCVYTVQSDV 237
Query: 158 WA 159
W+
Sbjct: 238 WS 239
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V + ++V E+ + +L+ L E + + ++ + Q+
Sbjct: 83 KEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSA 142
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N VVK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 143 MEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 201
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L +T + DVWA + W +Y + G+
Sbjct: 202 SLAYNT-FSIKSDVWAFGVLLWEIATYGMSPYPGI 235
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 127
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 128 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 186
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 187 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 220
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 5/133 (3%)
Query: 34 PNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGVSYCHR 92
P + + + KL ++ E+ + L+ L+ P L I I ++L+G+ Y H
Sbjct: 77 PYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP--LEETYIATILREILKGLDYLHS 134
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLY 151
IHRDIK N+LL+ G VKL DFG A +L + +V T ++ APE ++ + Y
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAY 193
Query: 152 GPAVDVWAIEWTS 164
D+W++ T+
Sbjct: 194 DFKADIWSLGITA 206
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 124 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 182
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 183 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 216
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 179 KRREFHAEPVDVWS 192
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 82/182 (45%), Gaps = 27/182 (14%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKKKLHL 51
F K+ + K A++ + EK +L +H N+VNLL + +
Sbjct: 68 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV 127
Query: 52 VFEFCDH-TVLNELE-------NHPHGLPWDL--IKQITWQVLRGVSYCHRHACIHRDIK 101
+ E+C + +LN L + G P +L + + QV +G+++ CIHRD+
Sbjct: 128 ITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVA 187
Query: 102 PENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDV 157
N+LLT V K+ DFG AR I NY + +W APE + D +Y DV
Sbjct: 188 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW-MAPESIF-DCVYTVQSDV 245
Query: 158 WA 159
W+
Sbjct: 246 WS 247
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L H N+V R +L E+C L + G+P ++ Q++ GV Y
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELLVG 147
H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 148 DTLYGPAVDVWA 159
+ VDVW+
Sbjct: 182 REFHAEPVDVWS 193
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 179 KRREFHAEPVDVWS 192
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 179 KRREFHAEPVDVWS 192
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+ L H N+V R +L E+C L + G+P ++ Q++ GV
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFA---RLINPGENYTDYVATRWYRAPELL 145
Y H HRDIKPEN+LL +K+ DFG A R N T Y APELL
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 146 VGDTLYGPAVDVWA 159
+ VDVW+
Sbjct: 180 KRREFHAEPVDVWS 193
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 207 KSA-CKSSDLWAL 218
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 146 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 206 KSA-CKSSDLWAL 217
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 71 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 130
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 131 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 191 KSA-CKSSDLWAL 202
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 209 KSA-CKSSDLWAL 220
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 207 KSA-CKSSDLWAL 218
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 207 KSA-CKSSDLWAL 218
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 209 KSACK-SSDLWAL 220
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ +T + ++ + APE
Sbjct: 122 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPE 180
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 181 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 214
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 123
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 124 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 184 KSA-CKSSDLWAL 195
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Query: 36 LVNLLEVFRRKKKLHLVFEFCD-----HTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
+V+L F K L LV + + + N E++P G T Q++ G+ +
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP-GFQEPRAIFYTAQIVSGLEHL 305
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT-DYVATRWYRAPELLVGDT 149
H+ I+RD+KPEN+LL +G V++ D G A + G+ T Y T + APELL+G+
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE 365
Query: 150 LYGPAVDVWAIEWT 163
Y +VD +A+ T
Sbjct: 366 -YDFSVDYFALGVT 378
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEK--RSLKHPNLVNLLEVFRR----KKKLHLVFEFC 56
FNK+ + + + ++ +A + E R+ + P++V +++V+ +K L +V E
Sbjct: 52 FNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 111
Query: 57 DH-TVLNELENH-PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NG 111
D + + +++ +I + + Y H HRD+KPEN+L T+ N
Sbjct: 112 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 171
Query: 112 VVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
++KL DFGFA+ + T T +Y APE+L G Y + D+W++
Sbjct: 172 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSL 219
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEK--RSLKHPNLVNLLEVFRR----KKKLHLVFEFC 56
FNK+ + + + ++ +A + E R+ + P++V +++V+ +K L +V E
Sbjct: 88 FNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 147
Query: 57 DH-TVLNELENH-PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NG 111
D + + +++ +I + + Y H HRD+KPEN+L T+ N
Sbjct: 148 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 207
Query: 112 VVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
++KL DFGFA+ + T T +Y APE+L G Y + D+W++
Sbjct: 208 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSL 255
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEK--RSLKHPNLVNLLEVFRR----KKKLHLVFEFC 56
FNK+ + + + ++ +A + E R+ + P++V +++V+ +K L +V E
Sbjct: 82 FNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 141
Query: 57 DH-TVLNELENH-PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NG 111
D + + +++ +I + + Y H HRD+KPEN+L T+ N
Sbjct: 142 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 201
Query: 112 VVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
++KL DFGFA+ + T T +Y APE+L G Y + D+W++
Sbjct: 202 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSL 249
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 209 KSACK-SSDLWAL 220
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Query: 36 LVNLLEVFRRKKKLHLVFEFCD-----HTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
+V+L F K L LV + + + N E++P G T Q++ G+ +
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP-GFQEPRAIFYTAQIVSGLEHL 305
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT-DYVATRWYRAPELLVGDT 149
H+ I+RD+KPEN+LL +G V++ D G A + G+ T Y T + APELL+G+
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE 365
Query: 150 LYGPAVDVWAIEWT 163
Y +VD +A+ T
Sbjct: 366 -YDFSVDYFALGVT 378
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 207 KSA-CKSSDLWAL 218
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 92 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 151
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 152 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 212 KSACK-SSDLWAL 223
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 149
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 150 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 210 KSACK-SSDLWAL 221
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEK--RSLKHPNLVNLLEVFRR----KKKLHLVFEFC 56
FNK+ + + + ++ +A + E R+ + P++V +++V+ +K L +V E
Sbjct: 38 FNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97
Query: 57 DH-TVLNELENH-PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NG 111
D + + +++ +I + + Y H HRD+KPEN+L T+ N
Sbjct: 98 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 157
Query: 112 VVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
++KL DFGFA+ + T T +Y APE+L G Y + D+W++
Sbjct: 158 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSL 205
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 66 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 125
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 126 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 186 KSACK-SSDLWAL 197
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 209 KSACK-SSDLWAL 220
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 124
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 125 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 185 KSA-CKSSDLWAL 196
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Query: 36 LVNLLEVFRRKKKLHLVFEFCD-----HTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
+V+L F K L LV + + + N E++P G T Q++ G+ +
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP-GFQEPRAIFYTAQIVSGLEHL 305
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT-DYVATRWYRAPELLVGDT 149
H+ I+RD+KPEN+LL +G V++ D G A + G+ T Y T + APELL+G+
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE 365
Query: 150 LYGPAVDVWAIEWT 163
Y +VD +A+ T
Sbjct: 366 -YDFSVDYFALGVT 378
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEK--RSLKHPNLVNLLEVFRR----KKKLHLVFEFC 56
FNK+ + + + ++ +A + E R+ + P++V +++V+ +K L +V E
Sbjct: 38 FNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97
Query: 57 DH-TVLNELENH-PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NG 111
D + + +++ +I + + Y H HRD+KPEN+L T+ N
Sbjct: 98 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 157
Query: 112 VVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
++KL DFGFA+ + T T +Y APE+L G Y + D+W++
Sbjct: 158 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSL 205
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEK--RSLKHPNLVNLLEVFRR----KKKLHLVFEFC 56
FNK+ + + + ++ +A + E R+ + P++V +++V+ +K L +V E
Sbjct: 37 FNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 96
Query: 57 DH-TVLNELENH-PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NG 111
D + + +++ +I + + Y H HRD+KPEN+L T+ N
Sbjct: 97 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 156
Query: 112 VVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
++KL DFGFA+ + T T +Y APE+L G Y + D+W++
Sbjct: 157 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSL 204
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEK--RSLKHPNLVNLLEVFRR----KKKLHLVFEFC 56
FNK+ + + + ++ +A + E R+ + P++V +++V+ +K L +V E
Sbjct: 36 FNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 95
Query: 57 DH-TVLNELENH-PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NG 111
D + + +++ +I + + Y H HRD+KPEN+L T+ N
Sbjct: 96 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 155
Query: 112 VVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
++KL DFGFA+ + T T +Y APE+L G Y + D+W++
Sbjct: 156 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSL 203
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEK--RSLKHPNLVNLLEVFRR----KKKLHLVFEFC 56
FNK+ + + + ++ +A + E R+ + P++V +++V+ +K L +V E
Sbjct: 43 FNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 102
Query: 57 DH-TVLNELENH-PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NG 111
D + + +++ +I + + Y H HRD+KPEN+L T+ N
Sbjct: 103 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 162
Query: 112 VVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
++KL DFGFA+ + T T +Y APE+L G Y + D+W++
Sbjct: 163 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSL 210
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEK--RSLKHPNLVNLLEVFRR----KKKLHLVFEFC 56
FNK+ + + + ++ +A + E R+ + P++V +++V+ +K L +V E
Sbjct: 42 FNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 101
Query: 57 DH-TVLNELENH-PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NG 111
D + + +++ +I + + Y H HRD+KPEN+L T+ N
Sbjct: 102 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 161
Query: 112 VVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
++KL DFGFA+ + T T +Y APE+L G Y + D+W++
Sbjct: 162 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSL 209
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 12/169 (7%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEK--RSLKHPNLVNLLEVFRR----KKKLHLVFEFC 56
FNK+ + + + ++ +A + E R+ + P++V +++V+ +K L +V E
Sbjct: 44 FNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 103
Query: 57 DH-TVLNELENH-PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NG 111
D + + +++ +I + + Y H HRD+KPEN+L T+ N
Sbjct: 104 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 163
Query: 112 VVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
++KL DFGFA+ + T T +Y APE+L G Y + D+W++
Sbjct: 164 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSL 211
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Query: 72 PWDLIKQITW--QVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA-RLINPGE 128
P+D + T ++L+G+ Y H IHRDIK N+LL+ G VKL DFG A +L +
Sbjct: 116 PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 175
Query: 129 NYTDYVATRWYRAPELLVGDTLYGPAVDVWAIEWTS 164
+V T ++ APE ++ + Y D+W++ T+
Sbjct: 176 KRNTFVGTPFWMAPE-VIQQSAYDSKADIWSLGITA 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 126
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 127 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 187 KSACK-SSDLWAL 198
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 13 KEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGL 71
KE ++ N+ L H NL+ L + F K + LV E+ D + + + + + L
Sbjct: 130 KEEVKNEISVMNQ-----LDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNL 184
Query: 72 PWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV--VKLCDFGFARLINPGEN 129
Q+ G+ + H+ +H D+KPENIL +K+ DFG AR P E
Sbjct: 185 TELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK 244
Query: 130 YTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
T + APE++ D + P D+W++
Sbjct: 245 LKVNFGTPEFLAPEVVNYDFVSFP-TDMWSV 274
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HP V L F+ +KL+ + + L + + T +++ + Y
Sbjct: 94 LDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 153
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT---DYVATRWYRAPELLVG 147
H IHRD+KPENILL + +++ DFG A++++P +V T Y +PELL
Sbjct: 154 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 148 DTLYGPAVDVWAI 160
+ + D+WA+
Sbjct: 214 KSACK-SSDLWAL 225
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+SL +P++V F +++V E C L EL + + Q ++GV
Sbjct: 81 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 140
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
Y H + IHRD+K N+ L + VK+ DFG A I GE D T Y APE+L
Sbjct: 141 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK 200
Query: 148 DTLYGPAVDVWAI 160
+ VD+W++
Sbjct: 201 KG-HSFEVDIWSL 212
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 14 EAIRQATEATNKKEKRSLKHPN---LVNLLEVFRRKKKLHLVFEF-CDHTVLNELENHPH 69
E +++A A ++E+ L + + + L F+ + L+LV ++ +L L
Sbjct: 127 EMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED 186
Query: 70 GLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN 129
LP D+ + +++ + H+ +HRDIKP+N+LL NG ++L DFG +N
Sbjct: 187 KLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT 246
Query: 130 YTDYVA--TRWYRAPELLV----GDTLYGPAVDVWAI 160
VA T Y +PE+L G YGP D W++
Sbjct: 247 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSL 283
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Query: 36 LVNLLEVFRRKKKLHLVFEFCD-----HTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
+V+L F K L LV + + + N E++P G T Q++ G+ +
Sbjct: 247 IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP-GFQEPRAIFYTAQIVSGLEHL 305
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT-DYVATRWYRAPELLVGDT 149
H+ I+RD+KPEN+LL +G V++ D G A + G+ T Y T + APELL+G+
Sbjct: 306 HQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE 365
Query: 150 LYGPAVDVWAIEWT 163
Y +VD +A+ T
Sbjct: 366 -YDFSVDYFALGVT 378
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL-----ENHPHGLPWDLIKQITWQVLR 85
L+ N V ++K L + E+C++ L +L N W L +QI L
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQI----LE 127
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-------------PG--ENY 130
+SY H IHR++KP NI + + VK+ DFG A+ ++ PG +N
Sbjct: 128 ALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 131 TDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
T + T Y A E+L G Y +D +++
Sbjct: 188 TSAIGTAXYVATEVLDGTGHYNEKIDXYSL 217
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 10/157 (6%)
Query: 14 EAIRQATEATNKKEKRSLKHPN---LVNLLEVFRRKKKLHLVFEF-CDHTVLNELENHPH 69
E +++A A ++E+ L + + + L F+ + L+LV ++ +L L
Sbjct: 111 EMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED 170
Query: 70 GLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN 129
LP D+ + +++ + H+ +HRDIKP+N+LL NG ++L DFG +N
Sbjct: 171 KLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT 230
Query: 130 YTDYVA--TRWYRAPELLV----GDTLYGPAVDVWAI 160
VA T Y +PE+L G YGP D W++
Sbjct: 231 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSL 267
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 69/158 (43%), Gaps = 33/158 (20%)
Query: 33 HPNLVNLL--------EVFRRKKKLHLVFEFCDHTVLNELENHPHGLPW--DLIKQITWQ 82
HPN+V E + + L+ E C ++ L+ P D + +I +Q
Sbjct: 85 HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQ 144
Query: 83 VLRGVSYCHRH--ACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV------ 134
R V + HR IHRD+K EN+LL+ G +KLCDFG A I+ +Y DY
Sbjct: 145 TCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS---HYPDYSWSAQRR 201
Query: 135 ----------ATRWYRAPEL--LVGDTLYGPAVDVWAI 160
T YR PE+ L + G D+WA+
Sbjct: 202 ALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWAL 239
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+SL +P++V F +++V E C L EL + + Q ++GV
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
Y H + IHRD+K N+ L + VK+ DFG A I GE D T Y APE+L
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK 216
Query: 148 DTLYGPAVDVWAI 160
+ VD+W++
Sbjct: 217 KG-HSFEVDIWSL 228
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT ++ + APE
Sbjct: 125 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPE 183
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 184 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 217
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 80/189 (42%), Gaps = 32/189 (16%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKK-KLH 50
F K ++ A++ E E R+L H N+VNLL + L
Sbjct: 40 FGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 99
Query: 51 LVFEFCD----HTVLNELENH--PHGL-PWDLIKQI---------TWQVLRGVSYCHRHA 94
++ EFC T L N P+ + P DL K ++QV +G+ +
Sbjct: 100 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 159
Query: 95 CIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLVGDTLY 151
CIHRD+ NILL+ VVK+CDFG AR I + R + APE + D +Y
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF-DRVY 218
Query: 152 GPAVDVWAI 160
DVW+
Sbjct: 219 TIQSDVWSF 227
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 4/141 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLN-ELENHPHGLPWDLIKQITWQVLRGV 87
+ L+HP LVNL F+ ++ + +V + L L+ + H + +K +++ +
Sbjct: 70 QGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH-FKEETVKLFICELVMAL 128
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
Y IHRD+KP+NILL +G V + DF A ++ T T+ Y APE+
Sbjct: 129 DYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSS 188
Query: 148 --DTLYGPAVDVWAIEWTSHS 166
Y AVD W++ T++
Sbjct: 189 RKGAGYSFAVDWWSLGVTAYE 209
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGVSY 89
L HP LV V ++ +++V E+ + +LN L +H GL + ++ + V G+++
Sbjct: 60 LSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAF 119
Query: 90 CHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLV 146
H IHRD+ N L+ + VK+ DFG R + + Y V T++ + APE+
Sbjct: 120 LESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVF- 177
Query: 147 GDTLYGPAVDVWAI 160
Y DVWA
Sbjct: 178 HYFKYSSKSDVWAF 191
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ YT ++ + APE
Sbjct: 126 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPE 184
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 185 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 218
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGL-PWDLIKQITWQVLRGVSY 89
L HP LV L V + + LV EF +H L++ GL + + + V G++Y
Sbjct: 60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 119
Query: 90 CHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLV 146
IHRD+ N L+ N V+K+ DFG R + + YT T++ + +PE+
Sbjct: 120 LEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEVF- 177
Query: 147 GDTLYGPAVDVWAI 160
+ Y DVW+
Sbjct: 178 SFSRYSSKSDVWSF 191
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 80/189 (42%), Gaps = 32/189 (16%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKK-KLH 50
F K ++ A++ E E R+L H N+VNLL + L
Sbjct: 49 FGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 108
Query: 51 LVFEFCD----HTVLNELENH--PHGL-PWDLIKQI---------TWQVLRGVSYCHRHA 94
++ EFC T L N P+ + P DL K ++QV +G+ +
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 168
Query: 95 CIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLVGDTLY 151
CIHRD+ NILL+ VVK+CDFG AR I + R + APE + D +Y
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF-DRVY 227
Query: 152 GPAVDVWAI 160
DVW+
Sbjct: 228 TIQSDVWSF 236
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 14 EAIRQATEATNKKEKRSLKHPN---LVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG 70
E I+++ A +E+ + N +V L F+ K L++V E+ L L ++ +
Sbjct: 112 EMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN-YD 170
Query: 71 LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA-RLINPGEN 129
+P K T +V+ + H IHRD+KP+N+LL +G +KL DFG ++ G
Sbjct: 171 VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 230
Query: 130 YTD-YVATRWYRAPELLV---GDTLYGPAVDVWAI 160
+ D V T Y +PE+L GD YG D W++
Sbjct: 231 HCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 265
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ T + ++ + APE
Sbjct: 122 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE 180
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 181 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 214
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 80/189 (42%), Gaps = 32/189 (16%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKK-KLH 50
F K ++ A++ E E R+L H N+VNLL + L
Sbjct: 40 FGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 99
Query: 51 LVFEFCD----HTVLNELENH--PHGL-PWDLIKQI---------TWQVLRGVSYCHRHA 94
++ EFC T L N P+ + P DL K ++QV +G+ +
Sbjct: 100 VITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 159
Query: 95 CIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLVGDTLY 151
CIHRD+ NILL+ VVK+CDFG AR I + R + APE + D +Y
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF-DRVY 218
Query: 152 GPAVDVWAI 160
DVW+
Sbjct: 219 TIQSDVWSF 227
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 271 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 330
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHR++ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 331 MEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 389
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 390 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 423
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 35/189 (18%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKKKLHL 51
F K+ + K A++ + EK +L +H N+VNLL + +
Sbjct: 68 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV 127
Query: 52 VFEFCDH-TVLNELE-NHPHGLPW---------------DLIKQITWQVLRGVSYCHRHA 94
+ E+C + +LN L P GL + DL+ + QV +G+++
Sbjct: 128 ITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL-HFSSQVAQGMAFLASKN 186
Query: 95 CIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTL 150
CIHRD+ N+LLT V K+ DFG AR I NY + +W APE + D +
Sbjct: 187 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW-MAPESIF-DCV 244
Query: 151 YGPAVDVWA 159
Y DVW+
Sbjct: 245 YTVQSDVWS 253
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 80/189 (42%), Gaps = 32/189 (16%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKK-KLH 50
F K ++ A++ E E R+L H N+VNLL + L
Sbjct: 49 FGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 108
Query: 51 LVFEFCD----HTVLNELENH--PHGL-PWDLIKQI---------TWQVLRGVSYCHRHA 94
++ EFC T L N P+ + P DL K ++QV +G+ +
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 168
Query: 95 CIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLVGDTLY 151
CIHRD+ NILL+ VVK+CDFG AR I + R + APE + D +Y
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIF-DRVY 227
Query: 152 GPAVDVWAI 160
DVW+
Sbjct: 228 TIQSDVWSF 236
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 121
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ T + ++ + APE
Sbjct: 122 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE 180
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 181 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 214
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 16 IRQATEATNKKE-KRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH------- 67
++Q N+K ++++ P LV L F+ L++V E+ E+ +H
Sbjct: 83 LKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPG---GEMFSHLRRIGRF 139
Query: 68 --PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN 125
PH + Q++ Y H I+RD+KPEN+L+ G +K+ DFGFA+ +
Sbjct: 140 SEPHA------RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK 193
Query: 126 PGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
G + T Y APE+++ Y AVD WA+
Sbjct: 194 -GRTWX-LCGTPEYLAPEIILSKG-YNKAVDWWAL 225
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSY 89
L P +V L R +++ E + L +L LP D Q L G+ Y
Sbjct: 122 GLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEY 181
Query: 90 CHRHACIHRDIKPENILLTANGV-VKLCDFGFARLINP---GENY--TDYV-ATRWYRAP 142
H +H D+K +N+LL+++G LCDFG A + P G++ DY+ T + AP
Sbjct: 182 LHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAP 241
Query: 143 ELLVGDTLYGPAVDVWA 159
E+++G + VDVW+
Sbjct: 242 EVVLGRSCDA-KVDVWS 257
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ T + ++ + APE
Sbjct: 125 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE 183
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 184 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 217
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 12/169 (7%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEK--RSLKHPNLVNLLEVFRR----KKKLHLVFEFC 56
FNK+ + + + ++ +A + E R+ + P++V +++V+ +K L +V E
Sbjct: 82 FNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECL 141
Query: 57 DH-TVLNELENH-PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NG 111
D + + +++ +I + + Y H HRD+KPEN+L T+ N
Sbjct: 142 DGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 201
Query: 112 VVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
++KL DFGFA+ + T T +Y APE+L G Y + D W++
Sbjct: 202 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDXWSL 249
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 6/139 (4%)
Query: 27 EKRSLK----HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
EKR L HP L L F+ +L V EF + L + +
Sbjct: 73 EKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAE 132
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATRWYRA 141
++ + + H I+RD+K +N+LL G KL DFG + I G + T Y A
Sbjct: 133 IISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIA 192
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+L + LYGPAVD WA+
Sbjct: 193 PEIL-QEMLYGPAVDWWAM 210
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 268 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 327
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHR++ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 328 MEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 386
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 387 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 420
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 16/192 (8%)
Query: 13 KEAIRQATEATNKKEKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHP 68
+E + +A +E R LK HPN+V L+ V +K+ +++V E L L
Sbjct: 148 RETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG 207
Query: 69 HGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL----I 124
L + Q+ G+ Y CIHRD+ N L+T V+K+ DFG +R +
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267
Query: 125 NPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGNMGSH 181
V +W APE L Y DVW+ + W + S +G N+ +
Sbjct: 268 XAASGGLRQVPVKW-TAPEAL-NYGRYSSESDVWSFGILLWETFS---LGASPYPNLSNQ 322
Query: 182 MARNLLKNNGRV 193
R ++ GR+
Sbjct: 323 QTREFVEKGGRL 334
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSY 89
L P +V L R +++ E + L +L LP D Q L G+ Y
Sbjct: 141 GLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEY 200
Query: 90 CHRHACIHRDIKPENILLTANGV-VKLCDFGFARLINP---GENY--TDYV-ATRWYRAP 142
H +H D+K +N+LL+++G LCDFG A + P G++ DY+ T + AP
Sbjct: 201 LHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAP 260
Query: 143 ELLVGDTLYGPAVDVWA 159
E+++G + VDVW+
Sbjct: 261 EVVLGRSCDA-KVDVWS 276
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSY 89
L P +V L R +++ E + L +L LP D Q L G+ Y
Sbjct: 120 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY 179
Query: 90 CHRHACIHRDIKPENILLTANGV-VKLCDFGFARLINP---GENY--TDYV-ATRWYRAP 142
H +H D+K +N+LL+++G LCDFG A + P G++ DY+ T + AP
Sbjct: 180 LHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 239
Query: 143 ELLVGDTLYGPAVDVWA 159
E+++G VD+W+
Sbjct: 240 EVVMGKPCDA-KVDIWS 255
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 17/160 (10%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSY 89
HPN+V+L V R K + +V EF ++ L+ H + +I+ + +LRG++
Sbjct: 100 QFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRK-HDGQFTVIQLVG--MLRGIAA 156
Query: 90 CHRHAC----IHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYR 140
R+ +HRD+ NIL+ +N V K+ DFG +R+I +P YT + RW
Sbjct: 157 GMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW-T 215
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
APE + + A DVW+ + W SY + + + N
Sbjct: 216 APE-AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 254
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 40/195 (20%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKKKLHL 51
F K+ + K A++ + EK +L +H N+VNLL + +
Sbjct: 53 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV 112
Query: 52 VFEFCDH-TVLNELE--------------NHPHGL------PWDL--IKQITWQVLRGVS 88
+ E+C + +LN L P GL P +L + + QV +G++
Sbjct: 113 ITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMA 172
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRAPEL 144
+ CIHRD+ N+LLT V K+ DFG AR I NY + +W APE
Sbjct: 173 FLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM-APES 231
Query: 145 LVGDTLYGPAVDVWA 159
+ D +Y DVW+
Sbjct: 232 IF-DCVYTVQSDVWS 245
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 27 EKRSL----KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
EKR L +HP L ++ F+ K+ L V E+ + L H +
Sbjct: 68 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAE 127
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT-DYVATRWYRA 141
++ G+ + H ++RD+K +NILL +G +K+ DFG + G+ T ++ T Y A
Sbjct: 128 IILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIA 187
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+L+G Y +VD W+
Sbjct: 188 PEILLGQK-YNHSVDWWSF 205
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 19 ATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQ 78
A T + ++ +HP L L F+ +L V E+ + L + + +
Sbjct: 53 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF 112
Query: 79 ITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATR 137
+++ + Y H ++RDIK EN++L +G +K+ DFG + I+ G + T
Sbjct: 113 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 172
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+L D YG AVD W +
Sbjct: 173 EYLAPEVL-EDNDYGRAVDWWGL 194
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSY 89
L P +V L R +++ E + L +L LP D Q L G+ Y
Sbjct: 106 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY 165
Query: 90 CHRHACIHRDIKPENILLTANGV-VKLCDFGFARLINP---GENY--TDYV-ATRWYRAP 142
H +H D+K +N+LL+++G LCDFG A + P G++ DY+ T + AP
Sbjct: 166 LHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 225
Query: 143 ELLVGDTLYGPAVDVWA 159
E+++G VD+W+
Sbjct: 226 EVVMGKPCDA-KVDIWS 241
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 14 EAIRQATEATNKKEKRSLKHPN---LVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG 70
E I+++ A +E+ + N +V L F+ + L++V E+ L L ++ +
Sbjct: 111 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YD 169
Query: 71 LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGEN 129
+P + T +V+ + H IHRD+KP+N+LL +G +KL DFG +N G
Sbjct: 170 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 130 YTD-YVATRWYRAPELLV---GDTLYGPAVDVWAI 160
D V T Y +PE+L GD YG D W++
Sbjct: 230 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 264
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 16/192 (8%)
Query: 13 KEAIRQATEATNKKEKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHP 68
+E + +A +E R LK HPN+V L+ V +K+ +++V E L L
Sbjct: 148 RETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG 207
Query: 69 HGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL----I 124
L + Q+ G+ Y CIHRD+ N L+T V+K+ DFG +R +
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267
Query: 125 NPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGNMGSH 181
V +W APE L Y DVW+ + W + S +G N+ +
Sbjct: 268 YAASGGLRQVPVKW-TAPEAL-NYGRYSSESDVWSFGILLWETFS---LGASPYPNLSNQ 322
Query: 182 MARNLLKNNGRV 193
R ++ GR+
Sbjct: 323 QTREFVEKGGRL 334
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 310 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 369
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHR++ N L+ N +VK+ DFG +RL+ G+ YT + ++ + APE
Sbjct: 370 MEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 428
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 429 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 462
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 19 ATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQ 78
A T + ++ +HP L L F+ +L V E+ + L + + +
Sbjct: 55 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF 114
Query: 79 ITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATR 137
+++ + Y H ++RDIK EN++L +G +K+ DFG + I+ G + T
Sbjct: 115 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP 174
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+L D YG AVD W +
Sbjct: 175 EYLAPEVL-EDNDYGRAVDWWGL 196
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 19 ATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQ 78
A T + ++ +HP L L F+ +L V E+ + L + + +
Sbjct: 50 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF 109
Query: 79 ITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATR 137
+++ + Y H ++RDIK EN++L +G +K+ DFG + I+ G + T
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 169
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+L D YG AVD W +
Sbjct: 170 EYLAPEVL-EDNDYGRAVDWWGL 191
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 19 ATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQ 78
A T + ++ +HP L L F+ +L V E+ + L + + +
Sbjct: 50 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF 109
Query: 79 ITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATR 137
+++ + Y H ++RDIK EN++L +G +K+ DFG + I+ G + T
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 169
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+L D YG AVD W +
Sbjct: 170 EYLAPEVL-EDNDYGRAVDWWGL 191
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
RSL H ++V F + +V E C L EL L + Q++ G
Sbjct: 72 RSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 131
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
Y HR+ IHRD+K N+ L + VK+ DFG A + GE T Y APE+L
Sbjct: 132 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSK 191
Query: 148 DTLYGPAVDVWAI 160
+ VDVW+I
Sbjct: 192 KG-HSFEVDVWSI 203
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
RSL H ++V F + +V E C L EL L + Q++ G
Sbjct: 72 RSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 131
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
Y HR+ IHRD+K N+ L + VK+ DFG A + GE T Y APE+L
Sbjct: 132 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-S 190
Query: 148 DTLYGPAVDVWAI 160
+ VDVW+I
Sbjct: 191 KKGHSFEVDVWSI 203
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 27 EKRSL----KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQ 82
EKR L +HP L ++ F+ K+ L V E+ + L H +
Sbjct: 67 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAE 126
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTD-YVATRWYRA 141
++ G+ + H ++RD+K +NILL +G +K+ DFG + G+ T+ + T Y A
Sbjct: 127 IILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIA 186
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+L+G Y +VD W+
Sbjct: 187 PEILLGQK-YNHSVDWWSF 204
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSY 89
L P +V L R +++ E + L +L LP D Q L G+ Y
Sbjct: 122 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY 181
Query: 90 CHRHACIHRDIKPENILLTANGV-VKLCDFGFARLINP---GENY--TDYV-ATRWYRAP 142
H +H D+K +N+LL+++G LCDFG A + P G++ DY+ T + AP
Sbjct: 182 LHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP 241
Query: 143 ELLVGDTLYGPAVDVWA 159
E+++G VD+W+
Sbjct: 242 EVVMGKPCDA-KVDIWS 257
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 19 ATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQ 78
A T + ++ +HP L L F+ +L V E+ + L + + +
Sbjct: 50 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF 109
Query: 79 ITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATR 137
+++ + Y H ++RDIK EN++L +G +K+ DFG + I+ G + T
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+L D YG AVD W +
Sbjct: 170 EYLAPEVL-EDNDYGRAVDWWGL 191
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 19 ATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQ 78
A T + ++ +HP L L F+ +L V E+ + L + + +
Sbjct: 50 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF 109
Query: 79 ITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATR 137
+++ + Y H ++RDIK EN++L +G +K+ DFG + I+ G + T
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+L D YG AVD W +
Sbjct: 170 EYLAPEVL-EDNDYGRAVDWWGL 191
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------R 165
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +T T
Sbjct: 166 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GATWT-LCGTP 223
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+++ Y AVD WA+
Sbjct: 224 EYLAPEIILSKG-YNKAVDWWAL 245
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 14/162 (8%)
Query: 15 AIRQATEATNKKEKR-----------SLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE 63
A++Q + NK+E + S P +V F + + E T +
Sbjct: 54 AVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMG-TCAEK 112
Query: 64 LENHPHG-LPWDLIKQITWQVLRGVSYC-HRHACIHRDIKPENILLTANGVVKLCDFGFA 121
L+ G +P ++ ++T +++ + Y +H IHRD+KP NILL G +KLCDFG +
Sbjct: 113 LKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGIS 172
Query: 122 RLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAIEWT 163
+ + Y APE + P D+ A W+
Sbjct: 173 GRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWS 214
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNEL-ENHPHGLPWDLIKQITWQVLRG 86
+ +KHPNLV LL V R+ +++ EF + +L+ L E + + ++ + Q+
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+ Y + IHRD+ N L+ N +VK+ DFG +RL+ G+ T + ++ + APE
Sbjct: 129 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPE 187
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
L + + DVWA + W +Y + G+
Sbjct: 188 SLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGI 221
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 2/143 (1%)
Query: 19 ATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQ 78
A T + ++ +HP L L F+ +L V E+ + L + + +
Sbjct: 50 AHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF 109
Query: 79 ITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATR 137
+++ + Y H ++RDIK EN++L +G +K+ DFG + I+ G + T
Sbjct: 110 YGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+L D YG AVD W +
Sbjct: 170 EYLAPEVL-EDNDYGRAVDWWGL 191
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFSEPHA---- 144
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +T
Sbjct: 145 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWT-LC 200
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 201 GTPEYLAPEIILSKG-YNKAVDWWAL 225
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
RSL H ++V F + +V E C L EL L + Q++ G
Sbjct: 76 RSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 135
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
Y HR+ IHRD+K N+ L + VK+ DFG A + GE T Y APE+L
Sbjct: 136 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL-S 194
Query: 148 DTLYGPAVDVWAI 160
+ VDVW+I
Sbjct: 195 KKGHSFEVDVWSI 207
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFE--FCDHTVLNEL-ENHPHGLPWDLIKQITWQVLRGVSY 89
HP ++ LL+ F ++ LV E + + + E P G + QV+ + +
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGE--GPSRCFFGQVVAAIQH 154
Query: 90 CHRHACIHRDIKPENILLTA-NGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGD 148
CH +HRDIK ENIL+ G KL DFG L++ E YTD+ TR Y PE +
Sbjct: 155 CHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH-DEPYTDFDGTRVYSPPEWISRH 213
Query: 149 TLYGPAVDVWAI 160
+ VW++
Sbjct: 214 QYHALPATVWSL 225
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 31/186 (16%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKKKLHL 51
F K+ + K A++ + EK +L +H N+VNLL + +
Sbjct: 68 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV 127
Query: 52 VFEFCDH-TVLNELENHPHGLPWDLIKQI-------------TWQVLRGVSYCHRHACIH 97
+ E+C + +LN L L D I + QV +G+++ CIH
Sbjct: 128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIH 187
Query: 98 RDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGP 153
RD+ N+LLT V K+ DFG AR I NY + +W APE + D +Y
Sbjct: 188 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW-MAPESIF-DCVYTV 245
Query: 154 AVDVWA 159
DVW+
Sbjct: 246 QSDVWS 251
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 14 EAIRQATEATNKKEKRSLKHPN---LVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG 70
E I+++ A +E+ + N +V L F+ + L++V E+ L L ++ +
Sbjct: 111 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YD 169
Query: 71 LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGEN 129
+P + T +V+ + H IHRD+KP+N+LL +G +KL DFG +N G
Sbjct: 170 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 229
Query: 130 YTD-YVATRWYRAPELLV---GDTLYGPAVDVWAI 160
D V T Y +PE+L GD YG D W++
Sbjct: 230 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 264
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 14 EAIRQATEATNKKEKRSLKHPN---LVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG 70
E I+++ A +E+ + N +V L F+ + L++V E+ L L ++ +
Sbjct: 106 EMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YD 164
Query: 71 LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGEN 129
+P + T +V+ + H IHRD+KP+N+LL +G +KL DFG +N G
Sbjct: 165 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224
Query: 130 YTD-YVATRWYRAPELLV---GDTLYGPAVDVWAI 160
D V T Y +PE+L GD YG D W++
Sbjct: 225 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSV 259
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 16 IRQATEATNKKE-KRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH------- 67
++Q N+K +++ P LV L F+ L++V E+ E+ +H
Sbjct: 68 LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRF 124
Query: 68 --PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN 125
PH + Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ +
Sbjct: 125 SEPHA------RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 178
Query: 126 PGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
G +T T Y APE+++ Y AVD WA+
Sbjct: 179 -GRTWT-LCGTPEYLAPEIILSKG-YNKAVDWWAL 210
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 31/186 (16%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKKKLHL 51
F K+ + K A++ + EK +L +H N+VNLL + +
Sbjct: 68 FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV 127
Query: 52 VFEFCDH-TVLNELENHPHGLPWDLIKQI-------------TWQVLRGVSYCHRHACIH 97
+ E+C + +LN L L D I + QV +G+++ CIH
Sbjct: 128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIH 187
Query: 98 RDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGP 153
RD+ N+LLT V K+ DFG AR I NY + +W APE + D +Y
Sbjct: 188 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW-MAPESIF-DCVYTV 245
Query: 154 AVDVWA 159
DVW+
Sbjct: 246 QSDVWS 251
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 65 ENHPHGLPWDLIKQITWQVLRGVSYCHRHACI-HRDIKPENILLTANGVVKLCDFGFARL 123
+N+ +P +IK I VL SY H I HRD+KP NIL+ NG VKL DFG +
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEY 201
Query: 124 INPGENYTDYVATRWYRAPELLVGDTLY-GPAVDVWAI 160
+ + T + PE ++ Y G VD+W++
Sbjct: 202 M-VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSL 238
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
RSL H ++V F + +V E C L EL L + Q++ G
Sbjct: 70 RSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 129
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
Y HR+ IHRD+K N+ L + VK+ DFG A + GE T Y APE+L
Sbjct: 130 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-S 188
Query: 148 DTLYGPAVDVWAI 160
+ VDVW+I
Sbjct: 189 KKGHSFEVDVWSI 201
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 3/118 (2%)
Query: 45 RKKKLHLVFEFCDHTVLNELENHPHGLPWD--LIKQITWQVLRGVSYCHRHACIHRDIKP 102
+ K L + EFCD L + G D L ++ Q+ +GV Y H I+RD+KP
Sbjct: 91 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKP 150
Query: 103 ENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
NI L VK+ DFG + T Y +PE + YG VD++A+
Sbjct: 151 SNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQD-YGKEVDLYAL 207
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFSEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +K+ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 29/177 (16%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTV 60
+RF+++ + ++ KE K R L+HPN++ + V + K+L+ + E+
Sbjct: 44 IRFDEETQRTFLKEV----------KVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGT 93
Query: 61 LNEL-ENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFG 119
L + ++ PW + G++Y H IHRD+ N L+ N V + DFG
Sbjct: 94 LRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFG 153
Query: 120 FARLI----------------NPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
ARL+ + + YT V ++ APE++ G + Y VDV++
Sbjct: 154 LARLMVDEKTQPEGLRSLKKPDRKKRYT-VVGNPYWMAPEMINGRS-YDEKVDVFSF 208
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 57/133 (42%), Gaps = 4/133 (3%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
+HP V L + + L+L E C ++ E LP + L +++ H
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH 174
Query: 92 RHACIHRDIKPENILLTANGVVKLCDFG-FARLINPGENYTDYVATRWYRAPELLVGDTL 150
+H D+KP NI L G KL DFG L G R Y APELL G
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR-YMAPELLQGS-- 231
Query: 151 YGPAVDVWAIEWT 163
YG A DV+++ T
Sbjct: 232 YGTAADVFSLGLT 244
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
KKS ++++ + A KK +KH N+V L +++ +LV + L +
Sbjct: 43 KKSPAFRDSSLENEIAVLKK----IKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRIL 98
Query: 67 HPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARL 123
+ QVL V Y H + +HRD+KPEN+L N + + DFG +++
Sbjct: 99 ERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158
Query: 124 INPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
G T T Y APE+L Y AVD W+I
Sbjct: 159 EQNGIMSTA-CGTPGYVAPEVL-AQKPYSKAVDCWSI 193
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
RSL H ++V F + +V E C L EL L + Q++ G
Sbjct: 94 RSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 153
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
Y HR+ IHRD+K N+ L + VK+ DFG A + GE T Y APE+L
Sbjct: 154 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-S 212
Query: 148 DTLYGPAVDVWAI 160
+ VDVW+I
Sbjct: 213 KKGHSFEVDVWSI 225
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 14 EAIRQATEATNKKEKRSLKHPN---LVNLLEVFRRKKKLHLVFEF-CDHTVLNELENHPH 69
E +++A A ++E+ L + + + L F+ L+LV ++ +L L
Sbjct: 111 EMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFED 170
Query: 70 GLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA-RLINPGE 128
LP ++ + +++ + H+ +HRDIKP+NIL+ NG ++L DFG +L+ G
Sbjct: 171 RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230
Query: 129 NYTDY-VATRWYRAPELLV----GDTLYGPAVDVWAI 160
+ V T Y +PE+L G YGP D W++
Sbjct: 231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSL 267
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+SL +P++V F +++V E C L EL + + Q ++GV
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
Y H + IHRD+K N+ L + VK+ DFG A I GE T Y APE+L
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCK 216
Query: 148 DTLYGPAVDVWAI 160
+ VD+W++
Sbjct: 217 KG-HSFEVDIWSL 228
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
RSL H ++V F + +V E C L EL L + Q++ G
Sbjct: 96 RSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 155
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
Y HR+ IHRD+K N+ L + VK+ DFG A + GE T Y APE+L
Sbjct: 156 YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL-S 214
Query: 148 DTLYGPAVDVWAI 160
+ VDVW+I
Sbjct: 215 KKGHSFEVDVWSI 227
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+SL +P++V F +++V E C L EL + + Q ++GV
Sbjct: 97 KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLIN-PGENYTDYVATRWYRAPELLVG 147
Y H + IHRD+K N+ L + VK+ DFG A I GE T Y APE+L
Sbjct: 157 YLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCK 216
Query: 148 DTLYGPAVDVWAI 160
+ VD+W++
Sbjct: 217 KG-HSFEVDIWSL 228
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------R 144
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G + T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LAGTP 202
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+++ Y AVD WA+
Sbjct: 203 EYLAPEIILSKG-YNKAVDWWAL 224
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHA------R 144
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +K+ DFGFA+ + G + T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX-LCGTP 202
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+++ Y AVD WA+
Sbjct: 203 EYLAPEIILSKG-YNKAVDWWAL 224
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHA------R 144
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +K+ DFGFA+ + G + T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-GRTWX-LCGTP 202
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+++ Y AVD WA+
Sbjct: 203 EYLAPEIILSKG-YNKAVDWWAL 224
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 3/133 (2%)
Query: 34 PNLVNLLEVFRRKKKLHLVFEFCDH-TVLNELENHPHGLPWDLIKQITWQVLRGVSYCHR 92
P++V + + L +V E+C +V + + L D I I L+G+ Y H
Sbjct: 84 PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF 143
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFA-RLINPGENYTDYVATRWYRAPELLVGDTLY 151
IHRDIK NILL G KL DFG A +L + + T ++ APE ++ + Y
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPE-VIQEIGY 202
Query: 152 GPAVDVWAIEWTS 164
D+W++ T+
Sbjct: 203 NCVADIWSLGITA 215
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG---GEMFSHLRRIGRFSEPHA---- 144
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+++ G +K+ DFGFA+ + G +
Sbjct: 145 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LC 200
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 201 GTPEYLAPEIILSKG-YNKAVDWWAL 225
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW- 138
++QV +G+ + CIHRD+ NILL+ VVK+CDFG AR I +Y R
Sbjct: 204 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 139 --YRAPELLVGDTLYGPAVDVWAI 160
+ APE + D +Y DVW+
Sbjct: 264 LKWMAPETIF-DRVYTIQSDVWSF 286
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG---GEMFSHLRRIGRFXEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+++ G +K+ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG---GEMFSHLRRIGRFSEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+++ G +K+ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW- 138
++QV +G+ + CIHRD+ NILL+ VVK+CDFG AR I +Y R
Sbjct: 206 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 139 --YRAPELLVGDTLYGPAVDVWAI 160
+ APE + D +Y DVW+
Sbjct: 266 LKWMAPETIF-DRVYTIQSDVWSF 288
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 55 FCDHTVLNELENHPHGLPWDLIKQI---------TWQVLRGVSYCHRHACIHRDIKPENI 105
F + L+++E P DL K ++QV +G+ + CIHRD+ NI
Sbjct: 165 FVEEKSLSDVEEEE--APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 222
Query: 106 LLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLVGDTLYGPAVDVWAI 160
LL+ VVK+CDFG AR I +Y R + APE + D +Y DVW+
Sbjct: 223 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVYTIQSDVWSF 279
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 80 TWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW- 138
++QV +G+ + CIHRD+ NILL+ VVK+CDFG AR I +Y R
Sbjct: 199 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 139 --YRAPELLVGDTLYGPAVDVWAI 160
+ APE + D +Y DVW+
Sbjct: 259 LKWMAPETIF-DRVYTIQSDVWSF 281
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------R 144
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G + T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LXGTP 202
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+++ Y AVD WA+
Sbjct: 203 EYLAPEIILSKG-YNKAVDWWAL 224
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 28/180 (15%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE--LENHPHG---------------LPW 73
L+HPN+V LL V + + L ++F +C H L+E + PH P
Sbjct: 86 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 145
Query: 74 DLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY--- 130
D + + Q+ G+ Y H +H+D+ N+L+ VK+ D G R + + Y
Sbjct: 146 DFVHLVA-QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 204
Query: 131 -TDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGNMG-SHMARN 185
+ RW ++ G + D+W+ + W SY + G N M RN
Sbjct: 205 GNSLLPIRWMAPEAIMYGK--FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN 262
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------R 145
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G + T
Sbjct: 146 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTP 203
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+++ Y AVD WA+
Sbjct: 204 EYLAPEIILSKG-YNKAVDWWAL 225
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------R 144
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G + T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTP 202
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+++ Y AVD WA+
Sbjct: 203 EYLAPEIILSKG-YNKAVDWWAL 224
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------R 144
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G + T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTP 202
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+++ Y AVD WA+
Sbjct: 203 EYLAPEIILSKG-YNKAVDWWAL 224
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------R 144
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G + T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTP 202
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+++ Y AVD WA+
Sbjct: 203 EYLAPEIILSKG-YNKAVDWWAL 224
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%), Gaps = 28/180 (15%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE--LENHPHG---------------LPW 73
L+HPN+V LL V + + L ++F +C H L+E + PH P
Sbjct: 69 LQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPP 128
Query: 74 DLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY--- 130
D + + Q+ G+ Y H +H+D+ N+L+ VK+ D G R + + Y
Sbjct: 129 DFVHLVA-QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 187
Query: 131 -TDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGNMG-SHMARN 185
+ RW ++ G + D+W+ + W SY + G N M RN
Sbjct: 188 GNSLLPIRWMAPEAIMYGK--FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRN 245
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKK-KLH 50
F K ++ A++ E E R+L H N+VNLL + L
Sbjct: 49 FGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 108
Query: 51 LVFEFCD----HTVLNELENHPHGLPW-DLIKQI---------TWQVLRGVSYCHRHACI 96
++ EFC T L N +P+ DL K ++QV +G+ + I
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNE--FVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXI 166
Query: 97 HRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLVGDTLYGP 153
HRD+ NILL+ VVK+CDFG AR I +Y R + APE + D +Y
Sbjct: 167 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVYTI 225
Query: 154 AVDVWAI 160
DVW+
Sbjct: 226 QSDVWSF 232
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFSEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFSEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------R 144
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G + T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTP 202
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+++ Y AVD WA+
Sbjct: 203 EYLAPEIILSKG-YNKAVDWWAL 224
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------R 144
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+++ G +++ DFGFA+ + G + T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTP 202
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+++ Y AVD WA+
Sbjct: 203 EYLAPEIIISKG-YNKAVDWWAL 224
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGEMFSHLRRIGRFXEPHA---- 138
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 139 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 194
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 195 GTPEYLAPEIILSKG-YNKAVDWWAL 219
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------R 131
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G + T
Sbjct: 132 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK-GRTWX-LCGTP 189
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+++ Y AVD WA+
Sbjct: 190 EYLAPEIILSKG-YNKAVDWWAL 211
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------R 144
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G + T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTP 202
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+++ Y AVD WA+
Sbjct: 203 EYLAPEIILSKG-YNKAVDWWAL 224
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------R 144
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G + T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTP 202
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+++ Y AVD WA+
Sbjct: 203 EYLAPEIILSKG-YNKAVDWWAL 224
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGEMFSHLRRIGRFXEPHA---- 164
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 165 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 220
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 221 GTPEYLAPEIILSKG-YNKAVDWWAL 245
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFSEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGEMFSHLRRIGRFXEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 81/199 (40%), Gaps = 36/199 (18%)
Query: 13 KEAIRQATEATNKKEKR---SLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL--ENH 67
KE +A ++E +PN+V LL V K + L+FE+ + LNE
Sbjct: 86 KEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMS 145
Query: 68 PHGL--------------------PWDLIKQ--ITWQVLRGVSYCHRHACIHRDIKPENI 105
PH + P +Q I QV G++Y +HRD+ N
Sbjct: 146 PHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNC 205
Query: 106 LLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWA-- 159
L+ N VVK+ DFG +R I + Y D + RW PE + + Y DVWA
Sbjct: 206 LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRW-MPPESIFYNR-YTTESDVWAYG 263
Query: 160 -IEWTSHSYSQIGFIGLGN 177
+ W SY + G+ +
Sbjct: 264 VVLWEIFSYGLQPYYGMAH 282
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFXEPHA---- 136
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 137 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 192
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 193 GTPEYLAPEIILSKG-YNKAVDWWAL 217
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFSEPHA---- 136
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 137 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 192
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 193 GTPEYLAPEIILSKG-YNKAVDWWAL 217
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------R 144
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G + T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTP 202
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y APE+++ Y AVD WA+
Sbjct: 203 EYLAPEIILSKG-YNKAVDWWAL 224
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGEMFSHLRRIGRFXEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFSEPHA---- 144
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 145 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 200
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 201 GTPEYLAPEIILSKG-YNKAVDWWAL 225
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGEMFSHLRRIGRFAEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFSEPHA---- 144
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 145 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 200
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 201 GTPEYLAPEIILSKG-YNKAVDWWAL 225
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFSEPHA---- 144
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 145 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 200
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 201 GTPEYLAPEIILSKG-YNKAVDWWAL 225
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFSEPHA---- 144
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 145 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 200
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 201 GTPEYLAPEIILSKG-YNKAVDWWAL 225
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 7/142 (4%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTV---LNELENHPHGLPWDLIKQITWQVLR 85
R++ P V R+ + + E D ++ ++ + +P D++ +I +++
Sbjct: 105 RTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK 164
Query: 86 GVSYCH-RHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPEL 144
+ + H + + IHRD+KP N+L+ A G VK+CDFG + + T + Y APE
Sbjct: 165 ALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPER 224
Query: 145 L---VGDTLYGPAVDVWAIEWT 163
+ + Y D+W++ T
Sbjct: 225 INPELNQKGYSVKSDIWSLGIT 246
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFSEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFXEPHA---- 144
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 145 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 200
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 201 GTPEYLAPEIILSKG-YNKAVDWWAL 225
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFSEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV---AGGEMFSHLRRIGRFXEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFXEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFSEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 78/188 (41%), Gaps = 32/188 (17%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKK-KLH 50
F K ++ A++ E E R+L H N+VNLL + L
Sbjct: 51 FGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 110
Query: 51 LVFEFCD----HTVLNELENH--PHGLPWDLIKQI---------TWQVLRGVSYCHRHAC 95
++ EFC T L N P+ P DL K ++QV +G+ +
Sbjct: 111 VIVEFCKFGNLSTYLRSKRNEFVPYK-PEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKX 169
Query: 96 IHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLVGDTLYG 152
IHRD+ NILL+ VVK+CDFG AR I + R + APE + D +Y
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIF-DRVYT 228
Query: 153 PAVDVWAI 160
DVW+
Sbjct: 229 IQSDVWSF 236
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFXEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPG---GEMFSHLRRIGRFSEPHA---- 164
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G +
Sbjct: 165 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LC 220
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 221 GTPEYLAPEIILSKG-YNKAVDWWAL 245
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG---GEMFSHLRRIGRFSEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+++ G +++ DFGFA+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ EF + L E L+ H + + Q T Q+ +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICK 128
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHRD+ NIL+ VK+ DFG +++ PGE+
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----P 183
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 184 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
Query: 181 HMARNLLKNNGRV 193
LLKNNGR+
Sbjct: 242 FHLIELLKNNGRL 254
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+L H LV L V +++ + ++ E+ + +LN L H + ++ V +
Sbjct: 55 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 114
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELL 145
Y +HRD+ N L+ GVVK+ DFG +R + E YT V +++ + PE+L
Sbjct: 115 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVL 173
Query: 146 VGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN--MGSHMARNL 186
+ + D+WA + W +S ++ + N H+A+ L
Sbjct: 174 MYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 218
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P L L F+ L++V E+ E+ +H PH
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPG---GEMFSHLRRIGRFSEPHA---- 144
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+++ G +K+ DFGFA+ + G +
Sbjct: 145 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LC 200
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 201 GTPEYLAPEIILSKG-YNKAVDWWAL 225
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 34/206 (16%)
Query: 12 YKEAIR---QATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHP 68
Y EA R Q E N + S V +LE F + +VFE + + ++ +
Sbjct: 54 YCEAARSEIQVLEHLNTTDPNSTF--RCVQMLEWFEHHGHICIVFELLGLSTYDFIKENG 111
Query: 69 HGLPW--DLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA----------------- 109
LP+ D I+++ +Q+ + V++ H + H D+KPENIL
Sbjct: 112 F-LPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170
Query: 110 --NGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAIEWTSHSY 167
N +K+ DFG A + E+++ V+TR YRAPE+++ P DVW+I Y
Sbjct: 171 LINPDIKVVDFGSATYDD--EHHSTLVSTRHYRAPEVILALGWSQPC-DVWSIGCILIEY 227
Query: 168 SQIGFIGLGNMGSHMARNLLKNNGRV 193
++G +H ++ L R+
Sbjct: 228 ----YLGFTVFPTHDSKEHLAMMERI 249
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITW--QVLRG 86
++L+H LV L V +++ ++++ EF L + G L K I + Q+ G
Sbjct: 62 KTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEG 121
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
++Y R IHRD++ N+L++ + + K+ DFG AR+I E YT ++ + APE
Sbjct: 122 MAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPE 180
Query: 144 LL 145
+
Sbjct: 181 AI 182
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P L L F+ L++V E+ E+ +H PH
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPG---GEMFSHLRRIGRFSEPHA---- 144
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+++ G +K+ DFGFA+ + G +
Sbjct: 145 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LC 200
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 201 GTPEYLAPEIILSKG-YNKAVDWWAL 225
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P L L F+ L++V E+ E+ +H PH
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPG---GEMFSHLRRIGRFXEPHA---- 144
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+++ G +K+ DFGFA+ + G +
Sbjct: 145 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-GRTWX-LC 200
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 201 GTPEYLAPEIILSKG-YNKAVDWWAL 225
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITW--QVLRG 86
++L+H LV L V R++ ++++ E+ L + G L K I + Q+ G
Sbjct: 63 KTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEG 122
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGE 128
++Y R IHRD++ N+L++ + + K+ DFG AR+I E
Sbjct: 123 MAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 164
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS-- 88
HPN++ L V + K + +V E+ ++ L+ H + +I+ + +LRG++
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVG--MLRGIASG 159
Query: 89 --YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRA 141
Y +HRD+ NIL+ +N V K+ DFG AR++ +P YT + RW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 142 PELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
PE + + A DVW+ + W SY + + + N
Sbjct: 219 PE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+L H LV L V +++ + ++ E+ + +LN L H + ++ V +
Sbjct: 59 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 118
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELL 145
Y +HRD+ N L+ GVVK+ DFG +R + E YT V +++ + PE+L
Sbjct: 119 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVL 177
Query: 146 VGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN--MGSHMARNL 186
+ + D+WA + W +S ++ + N H+A+ L
Sbjct: 178 MYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 222
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT----DY 133
++QV +G+++ CIHRD+ NILLT + K+CDFG AR I NY
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 134 VATRWYRAPELLVGDTLYGPAVDVWA 159
+ +W APE + + +Y DVW+
Sbjct: 232 LPVKW-MAPESIF-NCVYTFESDVWS 255
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 14/137 (10%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLP---WDLIKQITWQVLRGVS 88
+H NLV LL L LV+ + + L + + G P W + +I G++
Sbjct: 88 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTD------YVATRWYRAP 142
+ H + IHRDIK NILL K+ DFG AR E + V T Y AP
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQTVMXSRIVGTTAYMAP 204
Query: 143 ELLVGDTLYGPAVDVWA 159
E L G+ P D+++
Sbjct: 205 EALRGEIT--PKSDIYS 219
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 14/137 (10%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLP---WDLIKQITWQVLRGVS 88
+H NLV LL L LV+ + + L + + G P W + +I G++
Sbjct: 88 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 147
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTD------YVATRWYRAP 142
+ H + IHRDIK NILL K+ DFG AR E + V T Y AP
Sbjct: 148 FLHENHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQTVMXXRIVGTTAYMAP 204
Query: 143 ELLVGDTLYGPAVDVWA 159
E L G+ P D+++
Sbjct: 205 EALRGEIT--PKSDIYS 219
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+L H LV L V +++ + ++ E+ + +LN L H + ++ V +
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 119
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELL 145
Y +HRD+ N L+ GVVK+ DFG +R + E YT V +++ + PE+L
Sbjct: 120 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVL 178
Query: 146 VGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN--MGSHMARNL 186
+ + D+WA + W +S ++ + N H+A+ L
Sbjct: 179 MYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 30/204 (14%)
Query: 12 YKEAIRQATEATNKKEKRSLKHPNL-VNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG 70
YKEA R K ++ + NL V + + F + + FE + + L+++ +
Sbjct: 73 YKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNY- 131
Query: 71 LPWDL--IKQITWQVLRGVSYCHRHACIHRDIKPENIL-------LTAN----------- 110
LP+ + ++ + +Q+ + V + H + H D+KPENIL LT N
Sbjct: 132 LPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVK 191
Query: 111 -GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAIEWTSHSYSQ 169
V++ DFG A + E+++ V+TR YRAPE+++ + + DVW+I Y
Sbjct: 192 STAVRVVDFGSATFDH--EHHSTIVSTRHYRAPEVIL-ELGWSQPCDVWSIGCIIFEY-- 246
Query: 170 IGFIGLGNMGSHMARNLLKNNGRV 193
++G +H R L R+
Sbjct: 247 --YVGFTLFQTHDNREHLAMMERI 268
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT----DY 133
++QV +G+++ CIHRD+ NILLT + K+CDFG AR I NY
Sbjct: 165 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 134 VATRWYRAPELLVGDTLYGPAVDVWA 159
+ +W APE + + +Y DVW+
Sbjct: 225 LPVKW-MAPESIF-NCVYTFESDVWS 248
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT----DY 133
++QV +G+++ CIHRD+ NILLT + K+CDFG AR I NY
Sbjct: 167 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 226
Query: 134 VATRWYRAPELLVGDTLYGPAVDVWA 159
+ +W APE + + +Y DVW+
Sbjct: 227 LPVKW-MAPESIF-NCVYTFESDVWS 250
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT----DY 133
++QV +G+++ CIHRD+ NILLT + K+CDFG AR I NY
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 134 VATRWYRAPELLVGDTLYGPAVDVWA 159
+ +W APE + + +Y DVW+
Sbjct: 209 LPVKW-MAPESIF-NCVYTFESDVWS 232
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+L H LV L V +++ + ++ E+ + +LN L H + ++ V +
Sbjct: 66 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 125
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELL 145
Y +HRD+ N L+ GVVK+ DFG +R + E YT V +++ + PE+L
Sbjct: 126 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVL 184
Query: 146 VGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN--MGSHMARNL 186
+ + D+WA + W +S ++ + N H+A+ L
Sbjct: 185 MYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 229
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT----DY 133
++QV +G+++ CIHRD+ NILLT + K+CDFG AR I NY
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 231
Query: 134 VATRWYRAPELLVGDTLYGPAVDVWA 159
+ +W APE + + +Y DVW+
Sbjct: 232 LPVKW-MAPESIF-NCVYTFESDVWS 255
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 36 LVNLLEVFRRKKKLHLVFEFCDHTVLNELEN-HPHGLPWDLIKQITWQVLRGVSYCH--R 92
+V+L F + L LVFE + + + L N + G+ +L ++ Q+ + +
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPE 177
Query: 93 HACIHRDIKPENILL--TANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+ IH D+KPENILL +K+ DFG + + G+ + +R+YR+PE+L+G
Sbjct: 178 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLLG-MP 234
Query: 151 YGPAVDVWAI 160
Y A+D+W++
Sbjct: 235 YDLAIDMWSL 244
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 61/137 (44%), Gaps = 14/137 (10%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLP---WDLIKQITWQVLRGVS 88
+H NLV LL L LV+ + + L + + G P W + +I G++
Sbjct: 82 QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGIN 141
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDY------VATRWYRAP 142
+ H + IHRDIK NILL K+ DFG AR E + V T Y AP
Sbjct: 142 FLHENHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQXVMXXRIVGTTAYMAP 198
Query: 143 ELLVGDTLYGPAVDVWA 159
E L G+ P D+++
Sbjct: 199 EALRGEIT--PKSDIYS 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 78/168 (46%), Gaps = 33/168 (19%)
Query: 15 AIRQATEATNKK----EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCD----HTVLNE 63
AI+Q + +K E R L HPN+V L + LV E+ + + VL+
Sbjct: 36 AIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHG 93
Query: 64 LENHP-----HGLPWDLIKQITWQVLRGVSYCHR---HACIHRDIKPENILLTANG-VVK 114
E P H + W L Q +GV+Y H A IHRD+KP N+LL A G V+K
Sbjct: 94 AEPLPYYTAAHAMSWCL------QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLK 147
Query: 115 LCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDV--WAI 160
+CDFG A I + T+ + + APE+ G Y DV W I
Sbjct: 148 ICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSN-YSEKCDVFSWGI 192
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+L H LV L V +++ + ++ E+ + +LN L H + ++ V +
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 134
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELL 145
Y +HRD+ N L+ GVVK+ DFG +R + E YT V +++ + PE+L
Sbjct: 135 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVL 193
Query: 146 VGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN--MGSHMARNL 186
+ + D+WA + W +S ++ + N H+A+ L
Sbjct: 194 MYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 36 LVNLLEVFRRKKKLHLVFEFCDHTVLNELEN-HPHGLPWDLIKQITWQVLRGVSYCH--R 92
+V+L F + L LVFE + + + L N + G+ +L ++ Q+ + +
Sbjct: 99 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPE 158
Query: 93 HACIHRDIKPENILL--TANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+ IH D+KPENILL +K+ DFG + + G+ + +R+YR+PE+L+G
Sbjct: 159 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIYQXIQSRFYRSPEVLLG-MP 215
Query: 151 YGPAVDVWAI 160
Y A+D+W++
Sbjct: 216 YDLAIDMWSL 225
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 17/157 (10%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS---- 88
HPN++ L V + K + +V E+ ++ L+ H + +I+ + +LRG++
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVG--MLRGIASGMK 132
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRAPE 143
Y +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW +PE
Sbjct: 133 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPE 191
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
+ + A DVW+ + W SY + + + N
Sbjct: 192 -AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 78/168 (46%), Gaps = 33/168 (19%)
Query: 15 AIRQATEATNKK----EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCD----HTVLNE 63
AI+Q + +K E R L HPN+V L + LV E+ + + VL+
Sbjct: 35 AIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHG 92
Query: 64 LENHP-----HGLPWDLIKQITWQVLRGVSYCHR---HACIHRDIKPENILLTANG-VVK 114
E P H + W L Q +GV+Y H A IHRD+KP N+LL A G V+K
Sbjct: 93 AEPLPYYTAAHAMSWCL------QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLK 146
Query: 115 LCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDV--WAI 160
+CDFG A I + T+ + + APE+ G Y DV W I
Sbjct: 147 ICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSN-YSEKCDVFSWGI 191
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 17/149 (11%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS---- 88
HPN++ L V + K + +V E+ ++ L+ H + +I+ + +LRG++
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVG--MLRGIASGMK 149
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRAPE 143
Y +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW +PE
Sbjct: 150 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPE 208
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQ 169
+ + A DVW+ + W SY +
Sbjct: 209 -AIAYRKFTSASDVWSYGIVLWEVMSYGE 236
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS---- 88
HPN+++L V + K + +V E+ ++ L+ G + +I+ + +LRG+S
Sbjct: 82 HPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVG--MLRGISAGMK 138
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRAPE 143
Y +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW APE
Sbjct: 139 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TAPE 197
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQ 169
+ + A DVW+ + W SY +
Sbjct: 198 AIAFRK-FTSASDVWSYGIVMWEVVSYGE 225
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG-------LPWDLIKQITWQVL 84
+HP+LV+L+ + ++ L++++ ++ L+ H +G + W+ +I
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMEN---GNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFAR 122
RG+ Y H A IHRD+K NILL N V K+ DFG ++
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK 187
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG---GEMFSHLRRIGRFSEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+++ G +K+ DFG A+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 38/242 (15%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ E+ + L + L+ H + + Q T Q+ +
Sbjct: 70 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 129
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHRD+ NIL+ VK+ DFG +++ PGE+
Sbjct: 130 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----P 184
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 185 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 242
Query: 181 HMARNLLKNNGRVTVILKSDSLDSETWDLTWQEIFSKTSTTTIFKYLLIRGGNTDRNSHG 240
LLKNNGR+ + D E + + + + + F+ L +R N G
Sbjct: 243 FHLIELLKNNGRLP---RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMAG 299
Query: 241 VV 242
+V
Sbjct: 300 LV 301
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHG-------LPWDLIKQITWQVL 84
+HP+LV+L+ + ++ L++++ ++ L+ H +G + W+ +I
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMEN---GNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFAR 122
RG+ Y H A IHRD+K NILL N V K+ DFG ++
Sbjct: 150 RGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK 187
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHR 92
HP +V L F+ + KL+L+ +F L + + +K ++ G+ + H
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS 148
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFAR-LINPGENYTDYVATRWYRAPELL 145
I+RD+KPENILL G +KL DFG ++ I+ + + T Y APE++
Sbjct: 149 LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV 202
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------R 144
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G + T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTP 202
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
Y AP +++ Y AVD WA+
Sbjct: 203 EYLAPAIILSKG-YNKAVDWWAL 224
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 8/130 (6%)
Query: 36 LVNLLEVFRRKKKLHLVFEFCDHTVLNELEN-HPHGLPWDLIKQITWQVLRGVSYCH--R 92
+V+L F + L LVFE + + + L N + G+ +L ++ Q+ + +
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPE 177
Query: 93 HACIHRDIKPENILL--TANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
+ IH D+KPENILL +K+ DFG + G+ + +R+YR+PE+L+G
Sbjct: 178 LSIIHCDLKPENILLCNPKRXAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLG-MP 234
Query: 151 YGPAVDVWAI 160
Y A+D+W++
Sbjct: 235 YDLAIDMWSL 244
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
L HPN++ L F +++++L+ E+ L + I ++ + YC
Sbjct: 80 LHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYC 139
Query: 91 HRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTL 150
H IHRDIKPEN+LL G +K+ DFG++ + P T Y PE++ G +
Sbjct: 140 HGKKVIHRDIKPENLLLGLKGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEMIEG-RM 197
Query: 151 YGPAVDVWAI 160
+ VD+W I
Sbjct: 198 HNEKVDLWCI 207
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS-- 88
HPN++ L V + K + +V E+ ++ L+ H + +I+ + +LRG++
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVG--MLRGIASG 159
Query: 89 --YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRA 141
Y +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW +
Sbjct: 160 MKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 142 PELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
PE + + A DVW+ + W SY + + + N
Sbjct: 219 PE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS-- 88
HPN++ L V + K + +V E+ ++ L+ H + +I+ + +LRG++
Sbjct: 101 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVG--MLRGIASG 157
Query: 89 --YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRA 141
Y +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW +
Sbjct: 158 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 216
Query: 142 PELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
PE + + A DVW+ + W SY + + + N
Sbjct: 217 PE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 254
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS-- 88
HPN++ L V + K + +V E+ ++ L+ H + +I+ + +LRG++
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVG--MLRGIASG 159
Query: 89 --YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRA 141
Y +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 142 PELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
PE + + A DVW+ + W SY + + + N
Sbjct: 219 PE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 17/159 (10%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS-- 88
HPN+++L V + K + ++ E+ ++ L+ G + +I+ + +LRG+
Sbjct: 87 FDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVG--MLRGIGSG 143
Query: 89 --YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRA 141
Y + +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW A
Sbjct: 144 MKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWT-A 202
Query: 142 PELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
PE + + A DVW+ + W SY + + + N
Sbjct: 203 PE-AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 240
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS-- 88
HPN++ L V + K + +V E+ ++ L+ H + +I+ + +LRG++
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVG--MLRGIASG 159
Query: 89 --YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRA 141
Y +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 142 PELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
PE + + A DVW+ + W SY + + + N
Sbjct: 219 PE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS-- 88
HPN++ L V + K + +V E+ ++ L+ H + +I+ + +LRG++
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVG--MLRGIASG 159
Query: 89 --YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRA 141
Y +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 142 PELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
PE + + A DVW+ + W SY + + + N
Sbjct: 219 PE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITW--QVLRG 86
++L+H LV L V K+ ++++ EF L + G L K I + Q+ G
Sbjct: 238 KTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 296
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+++ + IHRD++ NIL++A+ V K+ DFG AR+I E YT ++ + APE
Sbjct: 297 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPE 355
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
+ + + DVW+ + +Y +I + G+ N
Sbjct: 356 AINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSN 391
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 17/159 (10%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS-- 88
HPN++ L V + K + +V E+ ++ L+ H + +I+ + +LRG++
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVG--MLRGIASG 159
Query: 89 --YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRA 141
Y +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 142 PELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
PE + + A DVW+ + W SY + + + N
Sbjct: 219 PE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
+HP L L F+ +L V E+ + L + D + +++ + Y H
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 265
Query: 92 RHA-CIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATRWYRAPELLVGDT 149
++RD+K EN++L +G +K+ DFG + I G + T Y APE+L D
Sbjct: 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL-EDN 324
Query: 150 LYGPAVDVWAI 160
YG AVD W +
Sbjct: 325 DYGRAVDWWGL 335
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
+HP L L F+ +L V E+ + L + D + +++ + Y H
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 268
Query: 92 RHA-CIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATRWYRAPELLVGDT 149
++RD+K EN++L +G +K+ DFG + I G + T Y APE+L D
Sbjct: 269 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL-EDN 327
Query: 150 LYGPAVDVWAI 160
YG AVD W +
Sbjct: 328 DYGRAVDWWGL 338
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
+HP L L F+ +L V E+ + L + D + +++ + Y H
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 125
Query: 92 RHA-CIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATRWYRAPELLVGDT 149
++RD+K EN++L +G +K+ DFG + I G + T Y APE+L D
Sbjct: 126 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL-EDN 184
Query: 150 LYGPAVDVWAI 160
YG AVD W +
Sbjct: 185 DYGRAVDWWGL 195
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 46 KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPEN 104
++ L LV E+ L + L+ H L + + Q+ +G+ Y C+HRD+ N
Sbjct: 85 RQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARN 144
Query: 105 ILLTANGVVKLCDFGFARLINPGENYTDYVATR-------WYRAPELLVGDTLYGPAVDV 157
IL+ + VK+ DFG A+L+ ++Y YV WY APE L D ++ DV
Sbjct: 145 ILVESEAHVKIADFGLAKLLPLDKDY--YVVREPGQSPIFWY-APESL-SDNIFSRQSDV 200
Query: 158 WAI 160
W+
Sbjct: 201 WSF 203
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 17/151 (11%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS-- 88
HPN++ L V + K + +V E+ ++ L+ H + +I+ + +LRG++
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK-HDAQFTVIQLVG--MLRGIASG 159
Query: 89 --YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRA 141
Y +HRD+ NIL+ +N V K+ DFG R++ +P YT + RW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 142 PELLVGDTLYGPAVDVWA---IEWTSHSYSQ 169
PE + + A DVW+ + W SY +
Sbjct: 219 PE-AIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
+HP L L F+ +L V E+ + L + D + +++ + Y H
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 126
Query: 92 RHA-CIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATRWYRAPELLVGDT 149
++RD+K EN++L +G +K+ DFG + I G + T Y APE+L D
Sbjct: 127 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL-EDN 185
Query: 150 LYGPAVDVWAI 160
YG AVD W +
Sbjct: 186 DYGRAVDWWGL 196
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 11/157 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITW--QVLRG 86
++L+H LV L V K+ ++++ EF L + G L K I + Q+ G
Sbjct: 65 KTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 123
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+++ + IHRD++ NIL++A+ V K+ DFG AR+I E YT ++ + APE
Sbjct: 124 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPE 182
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
+ + + DVW+ + +Y +I + G+ N
Sbjct: 183 AINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSN 218
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
+HP L L F+ +L V E+ + L + D + +++ + Y H
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 127
Query: 92 RHA-CIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATRWYRAPELLVGDT 149
++RD+K EN++L +G +K+ DFG + I G + T Y APE+L D
Sbjct: 128 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL-EDN 186
Query: 150 LYGPAVDVWAI 160
YG AVD W +
Sbjct: 187 DYGRAVDWWGL 197
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 46 KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPEN 104
++ L LV E+ L + L+ H L + + Q+ +G+ Y C+HRD+ N
Sbjct: 98 RQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARN 157
Query: 105 ILLTANGVVKLCDFGFARLINPGENYTDYVATR-------WYRAPELLVGDTLYGPAVDV 157
IL+ + VK+ DFG A+L+ ++Y YV WY APE L D ++ DV
Sbjct: 158 ILVESEAHVKIADFGLAKLLPLDKDY--YVVREPGQSPIFWY-APESL-SDNIFSRQSDV 213
Query: 158 WAI 160
W+
Sbjct: 214 WSF 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTV---LNELENHPHGLPWDLIKQITWQVLR 85
R++ P V R+ + + E D ++ ++ + +P D++ +I +++
Sbjct: 61 RTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK 120
Query: 86 GVSYCH-RHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPEL 144
+ + H + + IHRD+KP N+L+ A G VK+CDFG + + + Y APE
Sbjct: 121 ALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPER 180
Query: 145 L---VGDTLYGPAVDVWAIEWT 163
+ + Y D+W++ T
Sbjct: 181 INPELNQKGYSVKSDIWSLGIT 202
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS---- 88
HPN++ L V + K + +V E ++ L+ H + +I+ + +LRG++
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK-HDAQFTVIQLVG--MLRGIASGMK 161
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRAPE 143
Y +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW +PE
Sbjct: 162 YLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPE 220
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
+ + A DVW+ + W SY + + + N
Sbjct: 221 -AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLP---WDLIKQITWQVLRGVS 88
+H NLV LL L LV+ + + L + + G P W +I G++
Sbjct: 79 QHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGIN 138
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDY------VATRWYRAP 142
+ H + IHRDIK NILL K+ DFG AR E + V T Y AP
Sbjct: 139 FLHENHHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQXVXXSRIVGTTAYXAP 195
Query: 143 ELLVGDTLYGPAVDVWA 159
E L G+ P D+++
Sbjct: 196 EALRGEIT--PKSDIYS 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ E+ + L + L+ H + + Q T Q+ +
Sbjct: 97 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 156
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHRD+ NIL+ VK+ DFG +++ PGE+
Sbjct: 157 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----P 211
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 212 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 269
Query: 181 HMARNLLKNNGRV 193
LLKNNGR+
Sbjct: 270 FHLIELLKNNGRL 282
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 18/143 (12%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELE-----NHPHGLPWDLIK 77
EKR L+ P LV L F+ L++V E+ + + L + PH +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHA------R 144
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR 137
Q++ Y H I+RD+KPEN+L+ G +++ DFGFA+ + G + T
Sbjct: 145 FYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-GRTWX-LCGTP 202
Query: 138 WYRAPELLVGDTLYGPAVDVWAI 160
APE+++ Y AVD WA+
Sbjct: 203 EALAPEIILSKG-YNKAVDWWAL 224
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 24/146 (16%)
Query: 27 EKRSLK---HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENH---------PHGLPWD 74
EKR L+ P LV L F+ L++V E+ E+ +H PH
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG---GEMFSHLRRIGRFSEPHA---- 143
Query: 75 LIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYV 134
+ Q++ Y H I+RD+KPEN+++ G +++ DFG A+ + G +
Sbjct: 144 --RFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK-GRTWX-LC 199
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE+++ Y AVD WA+
Sbjct: 200 GTPEYLAPEIILSKG-YNKAVDWWAL 224
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPGENYTDYV 134
+I + + + H H HRD+KPEN+L T+ + V+KL DFGFA+ T
Sbjct: 132 EIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP-C 190
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T +Y APE+L G Y + D+W++
Sbjct: 191 YTPYYVAPEVL-GPEKYDKSCDMWSL 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ E+ + L + L+ H + + Q T Q+ +
Sbjct: 65 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 124
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHRD+ NIL+ VK+ DFG +++ PGE+
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----P 179
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 180 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 237
Query: 181 HMARNLLKNNGRV 193
LLKNNGR+
Sbjct: 238 FHLIELLKNNGRL 250
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTA---NGVVKLCDFGFARLINPGENYTDYV 134
+I + + + H H HRD+KPEN+L T+ + V+KL DFGFA+ T
Sbjct: 113 EIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP-C 171
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T +Y APE+L G Y + D+W++
Sbjct: 172 YTPYYVAPEVL-GPEKYDKSCDMWSL 196
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ E+ + L + L+ H + + Q T Q+ +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 128
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHRD+ NIL+ VK+ DFG +++ PGE+
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----P 183
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 184 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
Query: 181 HMARNLLKNNGRV 193
LLKNNGR+
Sbjct: 242 FHLIELLKNNGRL 254
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 46 KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPEN 104
++ L LV E+ L + L+ H L + + Q+ +G+ Y C+HRD+ N
Sbjct: 86 RQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARN 145
Query: 105 ILLTANGVVKLCDFGFARLINPGENYTDYVATR-------WYRAPELLVGDTLYGPAVDV 157
IL+ + VK+ DFG A+L+ ++Y YV WY APE L D ++ DV
Sbjct: 146 ILVESEAHVKIADFGLAKLLPLDKDY--YVVREPGQSPIFWY-APESL-SDNIFSRQSDV 201
Query: 158 WAI 160
W+
Sbjct: 202 WSF 204
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ E+ + L + L+ H + + Q T Q+ +
Sbjct: 72 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 131
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHRD+ NIL+ VK+ DFG +++ PGE+
Sbjct: 132 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----P 186
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 187 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 244
Query: 181 HMARNLLKNNGRV 193
LLKNNGR+
Sbjct: 245 FHLIELLKNNGRL 257
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ E+ + L + L+ H + + Q T Q+ +
Sbjct: 73 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 132
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHRD+ NIL+ VK+ DFG +++ PGE+
Sbjct: 133 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----P 187
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 188 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 245
Query: 181 HMARNLLKNNGRV 193
LLKNNGR+
Sbjct: 246 FHLIELLKNNGRL 258
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ E+ + L + L+ H + + Q T Q+ +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHRD+ NIL+ VK+ DFG +++ PGE+
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----P 180
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 181 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
Query: 181 HMARNLLKNNGRV 193
LLKNNGR+
Sbjct: 239 FHLIELLKNNGRL 251
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ E+ + L + L+ H + + Q T Q+ +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHRD+ NIL+ VK+ DFG +++ PGE+
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGES-----P 180
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 181 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
Query: 181 HMARNLLKNNGRV 193
LLKNNGR+
Sbjct: 239 FHLIELLKNNGRL 251
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ E+ + L + L+ H + + Q T Q+ +
Sbjct: 64 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 123
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHRD+ NIL+ VK+ DFG +++ PGE+
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----P 178
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 179 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 236
Query: 181 HMARNLLKNNGRV 193
LLKNNGR+
Sbjct: 237 FHLIELLKNNGRL 249
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ E+ + L + L+ H + + Q T Q+ +
Sbjct: 71 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 130
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHRD+ NIL+ VK+ DFG +++ PGE+
Sbjct: 131 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----P 185
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 186 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 243
Query: 181 HMARNLLKNNGRV 193
LLKNNGR+
Sbjct: 244 FHLIELLKNNGRL 256
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS---- 88
HPN++ L V + K + +V E ++ L+ H + +I+ + +LRG++
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK-HDAQFTVIQLVG--MLRGIASGMK 132
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRAPE 143
Y +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW +PE
Sbjct: 133 YLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TSPE 191
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
+ + A DVW+ + W SY + + + N
Sbjct: 192 -AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ E+ + L + L+ H + + Q T Q+ +
Sbjct: 66 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 125
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHRD+ NIL+ VK+ DFG +++ PGE+
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----P 180
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 181 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 238
Query: 181 HMARNLLKNNGRV 193
LLKNNGR+
Sbjct: 239 FHLIELLKNNGRL 251
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 17/157 (10%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS---- 88
HPN+++L V + K + ++ E+ ++ L+ G + +I+ + +LRG+
Sbjct: 74 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVG--MLRGIGSGMK 130
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRAPE 143
Y + +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW APE
Sbjct: 131 YLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW-TAPE 189
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
+ + A DVW+ + W SY + + + N
Sbjct: 190 -AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 225
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 78/157 (49%), Gaps = 17/157 (10%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS---- 88
HPN+++L V + K + ++ E+ ++ L+ G + +I+ + +LRG+
Sbjct: 68 HPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVG--MLRGIGSGMK 124
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRAPE 143
Y + +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW APE
Sbjct: 125 YLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRW-TAPE 183
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
+ + A DVW+ + W SY + + + N
Sbjct: 184 -AIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ E+ + L + L+ H + + Q T Q+ +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHRD+ NIL+ VK+ DFG +++ PGE+
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----P 198
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 199 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 256
Query: 181 HMARNLLKNNGRV 193
LLKNNGR+
Sbjct: 257 FHLIELLKNNGRL 269
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ E+ + L + L+ H + + Q T Q+ +
Sbjct: 69 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICK 128
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHRD+ NIL+ VK+ DFG +++ PGE+
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----P 183
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 184 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 241
Query: 181 HMARNLLKNNGRV 193
LLKNNGR+
Sbjct: 242 FHLIELLKNNGRL 254
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 32/205 (15%)
Query: 12 YKEAIR---QATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL-ENH 67
Y EA R Q E N + S V +LE F + +VFE + + + EN
Sbjct: 54 YCEAARSEIQVLEHLNTTDPNSTF--RCVQMLEWFEHHGHICIVFELLGLSTYDFIKENG 111
Query: 68 PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA------------------ 109
D I+++ +Q+ + V++ H + H D+KPENIL
Sbjct: 112 FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTL 171
Query: 110 -NGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAIEWTSHSYS 168
N +K+ DFG A + E+++ V R YRAPE+++ P DVW+I Y
Sbjct: 172 INPDIKVVDFGSATYDD--EHHSTLVXXRHYRAPEVILALGWSQPC-DVWSIGCILIEY- 227
Query: 169 QIGFIGLGNMGSHMARNLLKNNGRV 193
++G +H ++ L R+
Sbjct: 228 ---YLGFTVFPTHDSKEHLAMMERI 249
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+L H LV L V +++ + ++ E+ + +LN L H + ++ V +
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 119
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELL 145
Y +HRD+ N L+ GVVK+ DFG +R + E YT +++ + PE+L
Sbjct: 120 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSRGSKFPVRWSPPEVL 178
Query: 146 VGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN--MGSHMARNL 186
+ + D+WA + W +S ++ + N H+A+ L
Sbjct: 179 MYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 78/187 (41%), Gaps = 32/187 (17%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL-----------KHPNLVNLLEVFRRKK-KLH 50
F K ++ A++ E E R+L H N+VNLL + L
Sbjct: 49 FGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM 108
Query: 51 LVFEFCD----HTVLNELENHPHGLPW-DLIKQI---------TWQVLRGVSYCHRHACI 96
++ EFC T L N +P+ DL K ++QV +G+ + I
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNE--FVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXI 166
Query: 97 HRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELLVGDTLYGP 153
HRD+ NILL+ VVK+ DFG AR I +Y R + APE + D +Y
Sbjct: 167 HRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF-DRVYTI 225
Query: 154 AVDVWAI 160
DVW+
Sbjct: 226 QSDVWSF 232
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ E+ + L + L+ H + + Q T Q+ +
Sbjct: 84 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 143
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHRD+ NIL+ VK+ DFG +++ PGE+
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES-----P 198
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 199 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 256
Query: 181 HMARNLLKNNGRV 193
LLKNNGR+
Sbjct: 257 FHLIELLKNNGRL 269
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGVSY 89
HPN++ L V R + +V E+ ++ L+ L H + + V G+ Y
Sbjct: 107 FDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRY 166
Query: 90 CHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYTDY---VATRWYRAPEL 144
+HRD+ N+L+ +N V K+ DFG +R++ +P YT + RW APE
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW-TAPEA 225
Query: 145 LVGDTLYGPAVDVWA---IEWTSHSYSQ 169
+ T + A DVW+ + W +Y +
Sbjct: 226 IAFRT-FSSASDVWSFGVVMWEVLAYGE 252
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ L +
Sbjct: 51 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVMEYMSKGCLLDFLK 104
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 164
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGPAV---DVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 165 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 201
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Query: 79 ITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN--------- 129
I Q+ V + H +HRD+KP NI T + VVK+ DFG ++ E
Sbjct: 123 IFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 130 ----YTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+T V T+ Y +PE + G++ Y VD++++
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSL 216
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
+L H LV L V +++ + ++ E+ + +LN L H + ++ V +
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME 134
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPELL 145
Y +HRD+ N L+ GVVK+ DFG +R + E T V +++ + PE+L
Sbjct: 135 YLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE-TSSVGSKFPVRWSPPEVL 193
Query: 146 VGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN--MGSHMARNL 186
+ + D+WA + W +S ++ + N H+A+ L
Sbjct: 194 MYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 12 YKEAIRQATEATNKKEKRSLKHPNLVNLL-EVFRRKKKLHLVFEFCDHTVLNEL-ENHPH 69
Y+EA R K +++ ++ L L+ + F + + FE L EN+
Sbjct: 91 YREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQ 150
Query: 70 GLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILL-------------------TAN 110
P ++ + +Q+ + + H + H D+KPENIL N
Sbjct: 151 PYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKN 210
Query: 111 GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+++ DFG A + E++T VATR YR PE+++ + + DVW+I
Sbjct: 211 TSIRVADFGSATFDH--EHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSI 257
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 17/159 (10%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS-- 88
HPN++ L V + K + +V E ++ L+ H + +I+ + +LRG++
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK-HDAQFTVIQLVG--MLRGIASG 159
Query: 89 --YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYT---DYVATRWYRA 141
Y +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW +
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW-TS 218
Query: 142 PELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
PE + + A DVW+ + W SY + + + N
Sbjct: 219 PE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHR 92
HP +V L F+ + KL+L+ +F L + + +K ++ + + H
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFAR-LINPGENYTDYVATRWYRAPELL 145
I+RD+KPENILL G +KL DFG ++ I+ + + T Y APE++
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R +HPN++ L +V+ K +++V E L + + + + + V
Sbjct: 71 RYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVE 130
Query: 89 YCHRHACIHRDIKPENILLTANG----VVKLCDFGFARLINPGEN--YTDYVATRWYRAP 142
Y H +HRD+KP NIL +++CDFGFA+ + EN T + AP
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR-AENGLLMTPCYTANFVAP 189
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+L Y A D+W++
Sbjct: 190 EVLERQG-YDAACDIWSL 206
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHR 92
HP +V L F+ + KL+L+ +F L + + +K ++ + + H
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFAR-LINPGENYTDYVATRWYRAPELL 145
I+RD+KPENILL G +KL DFG ++ I+ + + T Y APE++
Sbjct: 146 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 199
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 25/146 (17%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTVLNE-------LENHPHGLPWDLIKQITWQVLRGV 87
N V L+ K L++ + C L + LE+ HG+ I Q+ V
Sbjct: 122 NTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV----CLHIFIQIAEAV 177
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFA----------RLINPGENYTDY---V 134
+ H +HRD+KP NI T + VVK+ DFG ++ P Y + V
Sbjct: 178 EFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQV 237
Query: 135 ATRWYRAPELLVGDTLYGPAVDVWAI 160
T+ Y +PE + G+ Y VD++++
Sbjct: 238 GTKLYMSPEQIHGNN-YSHKVDIFSL 262
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIK--QITWQVLRG 86
+ L+H LV L V ++ ++++ E+ ++ L + P G+ + K + Q+ G
Sbjct: 58 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 116
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+++ IHRD++ NIL++ K+ DFG ARLI E YT ++ + APE
Sbjct: 117 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPE 175
Query: 144 LLVGDTLYGPAVDVWAI-----EWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILK 198
+ T + DVW+ E +H +I + G+ N +++N R +++
Sbjct: 176 AINYGT-FTIKSDVWSFGILLTEIVTH--GRIPYPGMTN------PEVIQNLERGYRMVR 226
Query: 199 SDSLDSETWDLT---WQEIFSKTSTTTIFKYL 227
D+ E + L W+E + F YL
Sbjct: 227 PDNCPEELYQLMRLCWKE---RPEDRPTFDYL 255
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ L +
Sbjct: 51 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVIEYMSKGSLLDFLK 104
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 164
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGPAV---DVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 165 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 201
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 12 YKEAIRQATEATNKKEKRSLKHPNLVNLL-EVFRRKKKLHLVFEFCDHTVLNEL-ENHPH 69
Y+EA R K +++ ++ L L+ + F + + FE L EN+
Sbjct: 68 YREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQ 127
Query: 70 GLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILL-------------------TAN 110
P ++ + +Q+ + + H + H D+KPENIL N
Sbjct: 128 PYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKN 187
Query: 111 GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+++ DFG A + E++T VATR YR PE+++ + + DVW+I
Sbjct: 188 TSIRVADFGSATFDH--EHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSI 234
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHR 92
HP +V L F+ + KL+L+ +F L + + +K ++ + + H
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 93 HACIHRDIKPENILLTANGVVKLCDFGFAR-LINPGENYTDYVATRWYRAPELL 145
I+RD+KPENILL G +KL DFG ++ I+ + + T Y APE++
Sbjct: 145 LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVV 198
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 24/170 (14%)
Query: 12 YKEAIRQATEATNKKEKRSLKHPNLVNLL-EVFRRKKKLHLVFEFCDHTVLNEL-ENHPH 69
Y+EA R K +++ ++ L L+ + F + + FE L EN+
Sbjct: 59 YREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQ 118
Query: 70 GLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILL-------------------TAN 110
P ++ + +Q+ + + H + H D+KPENIL N
Sbjct: 119 PYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKN 178
Query: 111 GVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+++ DFG A + E++T VATR YR PE+++ + + DVW+I
Sbjct: 179 TSIRVADFGSATFDH--EHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSI 225
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 13/167 (7%)
Query: 6 KKKSSYYKEAIRQATEATNKKEKR-----------SLKHPNLVNLLEVFRRKKKLHLVFE 54
K + +Y + Q KKE++ ++KHP LV L F+ KL+ V +
Sbjct: 60 KAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLD 119
Query: 55 FCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
+ + L + ++ + Y H ++RD+KPENILL + G +
Sbjct: 120 YINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIV 179
Query: 115 LCDFGFARL-INPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
L DFG + I + + T Y APE+L Y VD W +
Sbjct: 180 LTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP-YDRTVDWWCL 225
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R +HPN++ L +V+ K +++V E L + + + + + V
Sbjct: 71 RYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVE 130
Query: 89 YCHRHACIHRDIKPENILLTANG----VVKLCDFGFARLINPGEN--YTDYVATRWYRAP 142
Y H +HRD+KP NIL +++CDFGFA+ + EN T + AP
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR-AENGLLXTPCYTANFVAP 189
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+L Y A D+W++
Sbjct: 190 EVLERQG-YDAACDIWSL 206
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ + L +
Sbjct: 48 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLK 101
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + ++ Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 102 GETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 161
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGPAV---DVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 162 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 198
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ L +
Sbjct: 217 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK 270
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 271 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGPAV---DVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 331 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 367
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ L +
Sbjct: 217 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK 270
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 271 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGPAV---DVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 331 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 367
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 59/149 (39%), Gaps = 27/149 (18%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLK-----------HPNLVNLLEVFRRKKKL 49
L+ KK AI++ E +K + R HPN++NLL + L
Sbjct: 42 LKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101
Query: 50 HLVFEFCDHTVLNE-------LENHP---------HGLPWDLIKQITWQVLRGVSYCHRH 93
+L E+ H L + LE P L + V RG+ Y +
Sbjct: 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK 161
Query: 94 ACIHRDIKPENILLTANGVVKLCDFGFAR 122
IHRD+ NIL+ N V K+ DFG +R
Sbjct: 162 QFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ L +
Sbjct: 300 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK 353
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 354 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 413
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGP---AVDVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 414 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 450
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ L +
Sbjct: 217 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVGEYMSKGSLLDFLK 270
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 271 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 330
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGPAV---DVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 331 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 367
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ L +
Sbjct: 51 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVTEYMSKGCLLDFLK 104
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 164
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGPAV---DVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 165 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 201
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIK--QITWQVLRG 86
+ L+H LV L V ++ ++++ E+ ++ L + P G+ + K + Q+ G
Sbjct: 73 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 131
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+++ IHRD++ NIL++ K+ DFG ARLI E YT ++ + APE
Sbjct: 132 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPE 190
Query: 144 LLVGDTLYGPAVDVWAI-----EWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILK 198
+ T + DVW+ E +H +I + G+ N +++N R +++
Sbjct: 191 AINYGT-FTIKSDVWSFGILLTEIVTH--GRIPYPGMTN------PEVIQNLERGYRMVR 241
Query: 199 SDSLDSETWDLT---WQEIFSKTSTTTIFKYL 227
D+ E + L W+E + F YL
Sbjct: 242 PDNCPEELYQLMRLCWKE---RPEDRPTFDYL 270
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 59/149 (39%), Gaps = 27/149 (18%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLK-----------HPNLVNLLEVFRRKKKL 49
L+ KK AI++ E +K + R HPN++NLL + L
Sbjct: 32 LKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 91
Query: 50 HLVFEFCDHTVLNE-------LENHP---------HGLPWDLIKQITWQVLRGVSYCHRH 93
+L E+ H L + LE P L + V RG+ Y +
Sbjct: 92 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK 151
Query: 94 ACIHRDIKPENILLTANGVVKLCDFGFAR 122
IHRD+ NIL+ N V K+ DFG +R
Sbjct: 152 QFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIK--QITWQVLRG 86
+ L+H LV L V ++ ++++ E+ ++ L + P G+ + K + Q+ G
Sbjct: 68 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 126
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+++ IHRD++ NIL++ K+ DFG ARLI E YT ++ + APE
Sbjct: 127 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPE 185
Query: 144 LLVGDTLYGPAVDVWAI-----EWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILK 198
+ T + DVW+ E +H +I + G+ N +++N R +++
Sbjct: 186 AINYGT-FTIKSDVWSFGILLTEIVTH--GRIPYPGMTN------PEVIQNLERGYRMVR 236
Query: 199 SDSLDSETWDLT---WQEIFSKTSTTTIFKYL 227
D+ E + L W+E + F YL
Sbjct: 237 PDNCPEELYQLMRLCWKE---RPEDRPTFDYL 265
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIK--QITWQVLRG 86
+ L+H LV L V ++ ++++ E+ ++ L + P G+ + K + Q+ G
Sbjct: 69 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 127
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+++ IHRD++ NIL++ K+ DFG ARLI E YT ++ + APE
Sbjct: 128 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPE 186
Query: 144 LLVGDTLYGPAVDVWAI-----EWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILK 198
+ T + DVW+ E +H +I + G+ N +++N R +++
Sbjct: 187 AINYGT-FTIKSDVWSFGILLTEIVTH--GRIPYPGMTN------PEVIQNLERGYRMVR 237
Query: 199 SDSLDSETWDLT---WQEIFSKTSTTTIFKYL 227
D+ E + L W+E + F YL
Sbjct: 238 PDNCPEELYQLMRLCWKE---RPEDRPTFDYL 266
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 18/126 (14%)
Query: 46 KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPEN 104
+ +L LV E+ L + L+ H L + + Q+ +G+ Y C+HRD+ N
Sbjct: 82 RPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARN 141
Query: 105 ILLTANGVVKLCDFGFARLI----------NPGENYTDYVATRWYRAPELLVGDTLYGPA 154
IL+ + VK+ DFG A+L+ PG++ WY APE L D ++
Sbjct: 142 ILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQS-----PIFWY-APESL-SDNIFSRQ 194
Query: 155 VDVWAI 160
DVW+
Sbjct: 195 SDVWSF 200
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ L +
Sbjct: 51 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK 104
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 164
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGPAV---DVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 165 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 201
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ L +
Sbjct: 51 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVCEYMSKGSLLDFLK 104
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 164
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGPAV---DVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 165 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 201
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIK--QITWQVLRG 86
+ L+H LV L V ++ ++++ E+ ++ L + P G+ + K + Q+ G
Sbjct: 63 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+++ IHRD++ NIL++ K+ DFG ARLI E YT ++ + APE
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPE 180
Query: 144 LLVGDTLYGPAVDVWAI-----EWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILK 198
+ T + DVW+ E +H +I + G+ N +++N R +++
Sbjct: 181 AINYGT-FTIKSDVWSFGILLTEIVTH--GRIPYPGMTN------PEVIQNLERGYRMVR 231
Query: 199 SDSLDSETWDLT---WQEIFSKTSTTTIFKYL 227
D+ E + L W+E + F YL
Sbjct: 232 PDNCPEELYQLMRLCWKE---RPEDRPTFDYL 260
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 16/150 (10%)
Query: 21 EATNKKEKRSLKHPN---LVNLLEVFRRKKKLHLVFEFCDHTVLN--ELENHPH-----G 70
EA EK+ L+ N +V+L + K L LV T++N +L+ H + G
Sbjct: 228 EAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL-----TLMNGGDLKFHIYHMGQAG 282
Query: 71 LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY 130
P ++ G+ HR ++RD+KPENILL +G +++ D G A + G+
Sbjct: 283 FPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 342
Query: 131 TDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
V T Y APE +V + Y + D WA+
Sbjct: 343 KGRVGTVGYMAPE-VVKNERYTFSPDWWAL 371
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 85/193 (44%), Gaps = 35/193 (18%)
Query: 29 RSLKHPNLVNLLEVFRR--KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLR 85
+SL+H N+V V ++ L L+ E+ + L + L+ H + + Q T Q+ +
Sbjct: 67 KSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICK 126
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI----------NPGENYTDYVA 135
G+ Y IHR++ NIL+ VK+ DFG +++ PGE+
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGES-----P 181
Query: 136 TRWYRAPELLVGDTLYGPAVDVWA-----------IEWTSHSYSQ----IGFIGLGNMGS 180
WY APE L ++ + A DVW+ IE + ++ IG G M
Sbjct: 182 IFWY-APESLT-ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIV 239
Query: 181 HMARNLLKNNGRV 193
LLKNNGR+
Sbjct: 240 FHLIELLKNNGRL 252
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ L +
Sbjct: 42 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK 95
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 96 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 155
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGPAV---DVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 156 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 192
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ L +
Sbjct: 40 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK 93
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 94 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 153
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGPAV---DVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 154 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 190
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 16/150 (10%)
Query: 21 EATNKKEKRSLKHPN---LVNLLEVFRRKKKLHLVFEFCDHTVLN--ELENHPH-----G 70
EA EK+ L+ N +V+L + K L LV T++N +L+ H + G
Sbjct: 228 EAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL-----TLMNGGDLKFHIYHMGQAG 282
Query: 71 LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY 130
P ++ G+ HR ++RD+KPENILL +G +++ D G A + G+
Sbjct: 283 FPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 342
Query: 131 TDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
V T Y APE +V + Y + D WA+
Sbjct: 343 KGRVGTVGYMAPE-VVKNERYTFSPDWWAL 371
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS-- 88
H N++ L V + K + ++ E+ ++ L++ G + +++ + +LRG++
Sbjct: 103 FSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDG-EFSVLQLVG--MLRGIAAG 159
Query: 89 --YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYTDY---VATRWYRA 141
Y +HRD+ NIL+ +N V K+ DFG +R++ +P YT + RW A
Sbjct: 160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW-TA 218
Query: 142 PELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILK 198
PE + + A DVW+ + W +Y + + L N H + + R+ +
Sbjct: 219 PE-AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN---HEVMKAINDGFRLPTPMD 274
Query: 199 SDSLDSETWDLTWQE 213
S + WQ+
Sbjct: 275 CPSAIYQLMMQCWQQ 289
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 71 LPWDLIKQITWQVLRGVSYCHRH-ACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN 129
+P +++ +IT ++ +++ + IHRDIKP NILL +G +KLCDFG + +
Sbjct: 122 IPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA 181
Query: 130 YTDYVATRWYRAPELL---VGDTLYGPAVDVWAIEWT 163
T R Y APE + Y DVW++ T
Sbjct: 182 KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT 218
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 46 KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPEN 104
+K L LV E+ L + L H GL L+ Q+ G++Y H IHR++ N
Sbjct: 90 EKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL--FAQQICEGMAYLHSQHYIHRNLAARN 147
Query: 105 ILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+LL + +VK+ DFG A+ + G Y D + ++ APE L Y A DVW+
Sbjct: 148 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYY-ASDVWSF 206
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ L +
Sbjct: 44 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK 97
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 98 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 157
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGPAV---DVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 158 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 194
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTV---LNELENHPHGLPWDLIKQITWQVLR 85
R++ P V R+ + + E D ++ ++ + +P D++ +I +++
Sbjct: 88 RTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK 147
Query: 86 GVSYCH-RHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPEL 144
+ + H + + IHRD+KP N+L+ A G VK CDFG + + + Y APE
Sbjct: 148 ALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPER 207
Query: 145 L---VGDTLYGPAVDVWAIEWT 163
+ + Y D+W++ T
Sbjct: 208 INPELNQKGYSVKSDIWSLGIT 229
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ L +
Sbjct: 51 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVIEYMSKGSLLDFLK 104
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 164
Query: 125 NPGENYTDYVA---TRWYRAPELLVGDTLYGPAV---DVWAI 160
E A +W APE LYG DVW+
Sbjct: 165 EDNEXTARQGAKFPIKW-TAPEA----ALYGRFTIKSDVWSF 201
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 19/136 (13%)
Query: 30 SLKHPNLVNLLEVFRRKKKLH----LVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+KH NL+ + +R L L+ F D L + + + W+ + + + R
Sbjct: 65 GMKHENLLQFIAAEKRGSNLEVELWLITAFHDKGSLTDYLKG-NIITWNELCHVAETMSR 123
Query: 86 GVSYCH-----------RHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTD-- 132
G+SY H + + HRD K +N+LL ++ L DFG A PG+ D
Sbjct: 124 GLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTH 183
Query: 133 -YVATRWYRAPELLVG 147
V TR Y APE+L G
Sbjct: 184 GQVGTRRYMAPEVLEG 199
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 46 KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPEN 104
+K L LV E+ L + L H GL L+ Q+ G++Y H IHR++ N
Sbjct: 90 EKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL--FAQQICEGMAYLHAQHYIHRNLAARN 147
Query: 105 ILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+LL + +VK+ DFG A+ + G Y D + ++ APE L Y A DVW+
Sbjct: 148 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYY-ASDVWSF 206
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
+ L +P +V ++ + + + LV E + LN+ L+ + H ++I ++ QV G+
Sbjct: 73 QQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGM 130
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA-------TRWYR 140
Y +HRD+ N+LL K+ DFG ++ + ENY Y A +WY
Sbjct: 131 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--YKAQTHGKWPVKWY- 187
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
APE + + DVW+ + W + SY Q + G+
Sbjct: 188 APE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 224
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 88/223 (39%), Gaps = 33/223 (14%)
Query: 9 SSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEV-FRRKKKLHL-----VFEFCDHTVL- 61
SS +E +R EA KE HP++ L+ V R + K L + F H L
Sbjct: 66 SSDIEEFLR---EAACMKE---FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLH 119
Query: 62 -----NELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLC 116
+ + +P LP + + + G+ Y IHRD+ N +L + V +
Sbjct: 120 AFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVA 179
Query: 117 DFGFARLINPGENYTDYVAT----RWYRAPELLVGDTLYGPAVDVWAI---EWTSHSYSQ 169
DFG +R I G+ Y A+ +W L D LY DVWA W + Q
Sbjct: 180 DFGLSRKIYSGDYYRQGCASKLPVKWLALESL--ADNLYTVHSDVWAFGVTMWEIMTRGQ 237
Query: 170 IGFIGLGNMGSHMARNLLKNNGRVTVILKSDSLDSETWDLTWQ 212
+ G+ N + N L R+ + E +DL +Q
Sbjct: 238 TPYAGIENAEIY---NYLIGGNRLK---QPPECMEEVYDLMYQ 274
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
+ L +P +V ++ + + + LV E + LN+ L+ + H ++I ++ QV G+
Sbjct: 61 QQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGM 118
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA-------TRWYR 140
Y +HRD+ N+LL K+ DFG ++ + ENY Y A +WY
Sbjct: 119 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--YKAQTHGKWPVKWY- 175
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
APE + + DVW+ + W + SY Q + G+
Sbjct: 176 APE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 212
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
+ L +P +V ++ + + + LV E + LN+ L+ + H ++I ++ QV G+
Sbjct: 63 QQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGM 120
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA-------TRWYR 140
Y +HRD+ N+LL K+ DFG ++ + ENY Y A +WY
Sbjct: 121 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--YKAQTHGKWPVKWY- 177
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
APE + + DVW+ + W + SY Q + G+
Sbjct: 178 APE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 214
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
+ L +P +V ++ + + + LV E + LN+ L+ + H ++I ++ QV G+
Sbjct: 67 QQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGM 124
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA-------TRWYR 140
Y +HRD+ N+LL K+ DFG ++ + ENY Y A +WY
Sbjct: 125 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--YKAQTHGKWPVKWY- 181
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
APE + + DVW+ + W + SY Q + G+
Sbjct: 182 APE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ + L +
Sbjct: 48 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLK 101
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + ++ Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 102 GETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 161
Query: 125 NPGE 128
E
Sbjct: 162 EDNE 165
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
+ L +P +V ++ + + + LV E + LN+ L+ + H ++I ++ QV G+
Sbjct: 83 QQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGM 140
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA-------TRWYR 140
Y +HRD+ N+LL K+ DFG ++ + ENY Y A +WY
Sbjct: 141 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--YKAQTHGKWPVKWY- 197
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
APE + + DVW+ + W + SY Q + G+
Sbjct: 198 APE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
+ L +P +V ++ + + + LV E + LN+ L+ + H ++I ++ QV G+
Sbjct: 83 QQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGM 140
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA-------TRWYR 140
Y +HRD+ N+LL K+ DFG ++ + ENY Y A +WY
Sbjct: 141 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--YKAQTHGKWPVKWY- 197
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
APE + + DVW+ + W + SY Q + G+
Sbjct: 198 APE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
+ L +P +V ++ + + + LV E + LN+ L+ + H ++I ++ QV G+
Sbjct: 81 QQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGM 138
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA-------TRWYR 140
Y +HRD+ N+LL K+ DFG ++ + ENY Y A +WY
Sbjct: 139 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--YKAQTHGKWPVKWY- 195
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
APE + + DVW+ + W + SY Q + G+
Sbjct: 196 APE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 232
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K ++H LV L V ++ +++V E+ L +
Sbjct: 51 KPGTMSPEAFLQEAQVMKK-----IRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK 104
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 164
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGPAV---DVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 165 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 201
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ L +
Sbjct: 51 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK 104
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD+ NIL+ N V K+ DFG ARLI
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLI 164
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGPAV---DVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 165 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 201
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIK--QITWQVLRG 86
+ L+H LV L V ++ ++++ E+ ++ L + P G+ + K + Q+ G
Sbjct: 63 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA---TRWYRAPE 143
+++ IHRD++ NIL++ K+ DFG ARLI E A +W APE
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKW-TAPE 180
Query: 144 LLVGDTLYGPAVDVWAI-----EWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILK 198
+ T + DVW+ E +H +I + G+ N +++N R +++
Sbjct: 181 AINYGT-FTIKSDVWSFGILLTEIVTH--GRIPYPGMTN------PEVIQNLERGYRMVR 231
Query: 199 SDSLDSETWDLT---WQEIFSKTSTTTIFKYL 227
D+ E + L W+E + F YL
Sbjct: 232 PDNCPEELYQLMRLCWKE---RPEDRPTFDYL 260
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 61/211 (28%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPN---LVNLLEVFR----RKKKLHLVFEFCDHT 59
K + +Y E PN +V LL+ F+ + +VFE H
Sbjct: 71 KSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHH 130
Query: 60 VLNEL-ENHPHGLPWDLIKQITWQVLRGVSYCHRHA-CIHRDIKPENILLTANGV----- 112
+L + +++ GLP +K+I QVL+G+ Y H IH DIKPENILL+ N
Sbjct: 131 LLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRL 190
Query: 113 --------------------------------------------VKLCDFGFARLINPGE 128
VK+ D G A ++ +
Sbjct: 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH--K 248
Query: 129 NYTDYVATRWYRAPELLVGDTLYGPAVDVWA 159
++T+ + TR YR+ E+L+G PA D+W+
Sbjct: 249 HFTEDIQTRQYRSLEVLIGSGYNTPA-DIWS 278
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITW--QVLRG 86
++L+H LV L V K+ ++++ EF L + G L K I + Q+ G
Sbjct: 232 KTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 290
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL 123
+++ + IHRD++ NIL++A+ V K+ DFG AR+
Sbjct: 291 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV 327
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 61/211 (28%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPN---LVNLLEVFR----RKKKLHLVFEFCDHT 59
K + +Y E PN +V LL+ F+ + +VFE H
Sbjct: 55 KSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHH 114
Query: 60 VLNEL-ENHPHGLPWDLIKQITWQVLRGVSYCHRHA-CIHRDIKPENILLTANGV----- 112
+L + +++ GLP +K+I QVL+G+ Y H IH DIKPENILL+ N
Sbjct: 115 LLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRL 174
Query: 113 --------------------------------------------VKLCDFGFARLINPGE 128
VK+ D G A ++ +
Sbjct: 175 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH--K 232
Query: 129 NYTDYVATRWYRAPELLVGDTLYGPAVDVWA 159
++T+ + TR YR+ E+L+G PA D+W+
Sbjct: 233 HFTEDIQTRQYRSLEVLIGSGYNTPA-DIWS 262
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTVLN--------ELENHPHGLPWDL--IKQITWQVL 84
++V LL V + + +V E H L E EN+P P L + Q+ ++
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYR 140
G++Y + +HRD+ N ++ + VK+ DFG R I + Y + RW
Sbjct: 140 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM- 198
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
APE L D ++ + D+W+ + W S ++ + GL N
Sbjct: 199 APESL-KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 237
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ +++V E+ L +
Sbjct: 218 KPGNMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLK 271
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG RLI
Sbjct: 272 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLI 331
Query: 125 NPGENYTDYVATRW---YRAPELLVGDTLYGPAV---DVWAI 160
E YT ++ + APE LYG DVW+
Sbjct: 332 EDNE-YTARQGAKFPIKWTAPEA----ALYGRFTIKSDVWSF 368
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 97/212 (45%), Gaps = 27/212 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIK--QITWQVLRG 86
+ L+H LV L V ++ ++++ E+ ++ L + P G+ + K + Q+ G
Sbjct: 59 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 117
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPE 143
+++ IHR+++ NIL++ K+ DFG ARLI E YT ++ + APE
Sbjct: 118 MAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPE 176
Query: 144 LLVGDTLYGPAVDVWAI-----EWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILK 198
+ T + DVW+ E +H +I + G+ N +++N R +++
Sbjct: 177 AINYGT-FTIKSDVWSFGILLTEIVTH--GRIPYPGMTN------PEVIQNLERGYRMVR 227
Query: 199 SDSLDSETWDLT---WQEIFSKTSTTTIFKYL 227
D+ E + L W+E + F YL
Sbjct: 228 PDNCPEELYQLMRLCWKE---RPEDRPTFDYL 256
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIK--QITWQVLRG 86
+ L+H LV L V ++ ++++ E+ ++ L + P G+ + K + Q+ G
Sbjct: 71 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 129
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA---TRWYRAPE 143
+++ IHRD++ NIL++ K+ DFG ARLI E A +W APE
Sbjct: 130 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPE 188
Query: 144 LLVGDTLYGPAVDVWAI-----EWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILK 198
+ T + DVW+ E +H +I + G+ N +++N R +++
Sbjct: 189 AINYGT-FTIKSDVWSFGILLTEIVTH--GRIPYPGMTN------PEVIQNLERGYRMVR 239
Query: 199 SDSLDSETWDLT---WQEIFSKTSTTTIFKYL 227
D+ E + L W+E + F YL
Sbjct: 240 PDNCPEELYQLMRLCWKE---RPEDRPTFDYL 268
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIK--QITWQVLRG 86
+ L+H LV L V ++ ++++ E+ ++ L + P G+ + K + Q+ G
Sbjct: 69 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 127
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA---TRWYRAPE 143
+++ IHRD++ NIL++ K+ DFG ARLI E A +W APE
Sbjct: 128 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPE 186
Query: 144 LLVGDTLYGPAVDVWAI-----EWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILK 198
+ T + DVW+ E +H +I + G+ N +++N R +++
Sbjct: 187 AINYGT-FTIKSDVWSFGILLTEIVTH--GRIPYPGMTN------PEVIQNLERGYRMVR 237
Query: 199 SDSLDSETWDLT---WQEIFSKTSTTTIFKYL 227
D+ E + L W+E + F YL
Sbjct: 238 PDNCPEELYQLMRLCWKE---RPEDRPTFDYL 266
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDL--IKQITWQVLRG 86
+ LKH LV L V ++ +++V E+ + L + G L + + QV G
Sbjct: 59 KKLKHDKLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAG 117
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA---TRWYRAPE 143
++Y R IHRD++ NIL+ + K+ DFG ARLI E A +W APE
Sbjct: 118 MAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKW-TAPE 176
Query: 144 LLVGDTLYGPAV---DVWA 159
LYG DVW+
Sbjct: 177 A----ALYGRFTIKSDVWS 191
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTVLN--------ELENHPHGLPWDL--IKQITWQVL 84
++V LL V + + +V E H L E EN+P P L + Q+ ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYR 140
G++Y + +HRD+ N ++ + VK+ DFG R I + Y + RW
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM- 199
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
APE L D ++ + D+W+ + W S ++ + GL N
Sbjct: 200 APESL-KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
+ L +P +V ++ + + + LV E + LN+ L+ + H ++I ++ QV G+
Sbjct: 425 QQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGM 482
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA-------TRWYR 140
Y +HRD+ N+LL K+ DFG ++ + ENY Y A +WY
Sbjct: 483 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--YKAQTHGKWPVKWY- 539
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
APE + + DVW+ + W + SY Q + G+
Sbjct: 540 APE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 576
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIK--QITWQVLRG 86
+ L+H LV L V ++ ++++ E+ ++ L + P G+ + K + Q+ G
Sbjct: 72 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 130
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA---TRWYRAPE 143
+++ IHRD++ NIL++ K+ DFG ARLI E A +W APE
Sbjct: 131 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPE 189
Query: 144 LLVGDTLYGPAVDVWAI-----EWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILK 198
+ T + DVW+ E +H +I + G+ N +++N R +++
Sbjct: 190 AINYGT-FTIKSDVWSFGILLTEIVTH--GRIPYPGMTN------PEVIQNLERGYRMVR 240
Query: 199 SDSLDSETWDLT---WQEIFSKTSTTTIFKYL 227
D+ E + L W+E + F YL
Sbjct: 241 PDNCPEELYQLMRLCWKE---RPEDRPTFDYL 269
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIK--QITWQVLRG 86
+ L+H LV L V ++ ++++ E+ ++ L + P G+ + K + Q+ G
Sbjct: 65 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 123
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA---TRWYRAPE 143
+++ IHRD++ NIL++ K+ DFG ARLI E A +W APE
Sbjct: 124 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPE 182
Query: 144 LLVGDTLYGPAVDVWAI-----EWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILK 198
+ T + DVW+ E +H +I + G+ N +++N R +++
Sbjct: 183 AINYGT-FTIKSDVWSFGILLTEIVTH--GRIPYPGMTN------PEVIQNLERGYRMVR 233
Query: 199 SDSLDSETWDLT---WQEIFSKTSTTTIFKYL 227
D+ E + L W+E + F YL
Sbjct: 234 PDNCPEELYQLMRLCWKE---RPEDRPTFDYL 262
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIK--QITWQVLRG 86
+ L+H LV L V ++ ++++ E+ ++ L + P G+ + K + Q+ G
Sbjct: 63 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA---TRWYRAPE 143
+++ IHRD++ NIL++ K+ DFG ARLI E A +W APE
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPE 180
Query: 144 LLVGDTLYGPAVDVWAI-----EWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILK 198
+ T + DVW+ E +H +I + G+ N +++N R +++
Sbjct: 181 AINYGT-FTIKSDVWSFGILLTEIVTH--GRIPYPGMTN------PEVIQNLERGYRMVR 231
Query: 199 SDSLDSETWDLT---WQEIFSKTSTTTIFKYL 227
D+ E + L W+E + F YL
Sbjct: 232 PDNCPEELYQLMRLCWKE---RPEDRPTFDYL 260
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 29 RSLKHPNLVNLLEVFRRKKKL-HLVFEFCDHTVLNELENHPHGLPW--DLIKQITWQVLR 85
R L HPN++ L+ + + L H++ + H L + P P DLI QV R
Sbjct: 77 RGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLIS-FGLQVAR 135
Query: 86 GVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
G+ Y +HRD+ N +L + VK+ DFG AR I E Y+
Sbjct: 136 GMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
+ L +P +V ++ + + + LV E + LN+ L+ + H ++I ++ QV G+
Sbjct: 426 QQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGM 483
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA-------TRWYR 140
Y +HRD+ N+LL K+ DFG ++ + ENY Y A +WY
Sbjct: 484 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--YKAQTHGKWPVKWY- 540
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
APE + + DVW+ + W + SY Q + G+
Sbjct: 541 APE-CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 577
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIK--QITWQVLRG 86
+ L+H LV L V ++ ++++ E+ ++ L + P G+ + K + Q+ G
Sbjct: 64 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 122
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA---TRWYRAPE 143
+++ IHRD++ NIL++ K+ DFG ARLI E A +W APE
Sbjct: 123 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPE 181
Query: 144 LLVGDTLYGPAVDVWAI-----EWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILK 198
+ T + DVW+ E +H +I + G+ N +++N R +++
Sbjct: 182 AINYGT-FTIKSDVWSFGILLTEIVTH--GRIPYPGMTN------PEVIQNLERGYRMVR 232
Query: 199 SDSLDSETWDLT---WQEIFSKTSTTTIFKYL 227
D+ E + L W+E + F YL
Sbjct: 233 PDNCPEELYQLMRLCWKE---RPEDRPTFDYL 261
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGVSY 89
HPN++ L V R + +V E+ ++ L+ L H + + V G+ Y
Sbjct: 107 FDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRY 166
Query: 90 CHRHACIHRDIKPENILLTANGVVKLCDFGFARLI--NPGENYTDY---VATRWYRAPEL 144
+HRD+ N+L+ +N V K+ DFG +R++ +P T + RW APE
Sbjct: 167 LSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWT-APEA 225
Query: 145 LVGDTLYGPAVDVWA---IEWTSHSYSQ 169
+ T + A DVW+ + W +Y +
Sbjct: 226 IAFRT-FSSASDVWSFGVVMWEVLAYGE 252
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 27/149 (18%)
Query: 1 LRFNKKKKSSYYKEAIRQATEATNKKEKRSLK-----------HPNLVNLLEVFRRKKKL 49
L+ KK AI++ E +K + R HPN++NLL + L
Sbjct: 39 LKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 98
Query: 50 HLVFEFCDHTVLNE-------LENHP---------HGLPWDLIKQITWQVLRGVSYCHRH 93
+L E+ H L + LE P L + V RG+ Y +
Sbjct: 99 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK 158
Query: 94 ACIHRDIKPENILLTANGVVKLCDFGFAR 122
IHR++ NIL+ N V K+ DFG +R
Sbjct: 159 QFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%), Gaps = 27/212 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIK--QITWQVLRG 86
+ L+H LV L V ++ ++++ E+ ++ L + P G+ + K + Q+ G
Sbjct: 63 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG 121
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVA---TRWYRAPE 143
+++ IHRD++ NIL++ K+ DFG ARLI E A +W APE
Sbjct: 122 MAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TAPE 180
Query: 144 LLVGDTLYGPAVDVWAI-----EWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILK 198
+ T + DVW+ E +H +I + G+ N +++N R +++
Sbjct: 181 AINYGT-FTIKSDVWSFGILLTEIVTH--GRIPYPGMTN------PEVIQNLERGYRMVR 231
Query: 199 SDSLDSETWDLT---WQEIFSKTSTTTIFKYL 227
D+ E + L W+E + F YL
Sbjct: 232 PDNCPEELYQLMRLCWKE---RPEDRPTFDYL 260
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
++L HP++V L+ + + ++ E + L LE + + L + + Q+ + +
Sbjct: 68 KNLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 126
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPEL 144
+Y C+HRDI NIL+ + VKL DFG +R I E+Y TR + +PE
Sbjct: 127 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPE- 184
Query: 145 LVGDTLYGPAVDVWAIE---WTSHSYSQIGFIGLGN 177
+ + A DVW W S+ + F L N
Sbjct: 185 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 220
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
++L HP++V L+ + + ++ E + L LE + + L + + Q+ + +
Sbjct: 80 KNLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 138
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPEL 144
+Y C+HRDI NIL+ + VKL DFG +R I E+Y TR + +PE
Sbjct: 139 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPE- 196
Query: 145 LVGDTLYGPAVDVWAIE---WTSHSYSQIGFIGLGN 177
+ + A DVW W S+ + F L N
Sbjct: 197 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 232
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 10/156 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
++L HP++V L+ + + ++ E + L LE + + L + + Q+ + +
Sbjct: 64 KNLDHPHIVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 122
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW---YRAPEL 144
+Y C+HRDI NIL+ + VKL DFG +R I E+Y TR + +PE
Sbjct: 123 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE-DEDYYKASVTRLPIKWMSPE- 180
Query: 145 LVGDTLYGPAVDVWAIE---WTSHSYSQIGFIGLGN 177
+ + A DVW W S+ + F L N
Sbjct: 181 SINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 216
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 17/180 (9%)
Query: 5 KKKKSSYYKEAIRQATEATNKKEK-------RSLKHPNLVNLLEVFRRKKKLHLVFEFCD 57
+KK+ + ++Q TE + +E L +P +V L+ V + + L LV E
Sbjct: 34 RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAG 92
Query: 58 HTVLNE-LENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLC 116
L++ L +P + ++ QV G+ Y +HRD+ N+LL K+
Sbjct: 93 GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKIS 152
Query: 117 DFGFARLINPGEN-YTDYVATRW---YRAPELLVGDTLYGPAVDVWA---IEWTSHSYSQ 169
DFG ++ + ++ YT A +W + APE + + DVW+ W + SY Q
Sbjct: 153 DFGLSKALGADDSYYTARSAGKWPLKWYAPE-CINFRKFSSRSDVWSYGVTMWEALSYGQ 211
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 19/153 (12%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
HPN+++L V + + ++ EF ++ L+ G + +I+ + +LRG++
Sbjct: 91 FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVG--MLRGIAAG 147
Query: 91 HRHAC----IHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDY-------VATRWY 139
++ +HRD+ NIL+ +N V K+ DFG +R + + Y + RW
Sbjct: 148 MKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW- 206
Query: 140 RAPELLVGDTLYGPAVDVWA---IEWTSHSYSQ 169
APE + + A DVW+ + W SY +
Sbjct: 207 TAPE-AIQYRKFTSASDVWSYGIVMWEVMSYGE 238
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGVS 88
S+ HP+LV LL V + LV + H L E + H + L+ Q+ +G+
Sbjct: 73 SMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMM 131
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGE 128
Y +HRD+ N+L+ + VK+ DFG ARL+ E
Sbjct: 132 YLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 171
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 30 SLKHPNLVNLLEVFRRKKK----LHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLR 85
+KH N++ + +R L L+ F + L++ + + W+ + I + R
Sbjct: 74 GMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLK-ANVVSWNELCHIAETMAR 132
Query: 86 GVSYCH----------RHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTD--- 132
G++Y H + A HRDIK +N+LL N + DFG A G++ D
Sbjct: 133 GLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHG 192
Query: 133 YVATRWYRAPELLVG 147
V TR Y APE+L G
Sbjct: 193 QVGTRRYMAPEVLEG 207
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGVS 88
S+ HP+LV LL V + LV + H L E + H + L+ Q+ +G+
Sbjct: 96 SMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMM 154
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGE 128
Y +HRD+ N+L+ + VK+ DFG ARL+ E
Sbjct: 155 YLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 194
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 31 LKHPNLVNLLEVF-RRKKKLHLVFEF-CDHTVLNELENHPHG-LPWDLIKQITWQVLRGV 87
L+H NLV LL V K L++V E+ ++++ L + L D + + + V +
Sbjct: 62 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 121
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
Y + +HRD+ N+L++ + V K+ DFG + + ++ T + +W APE L
Sbjct: 122 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEALR- 178
Query: 148 DTLYGPAVDVWA---IEWTSHSYSQIGF 172
+ + DVW+ + W +S+ ++ +
Sbjct: 179 EAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 15 AIRQATEATNKKEK----------RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLN-- 62
AI+ EA + +E+ + ++V LL V + + ++ E L
Sbjct: 50 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 109
Query: 63 ------ELENHPHGLPWDLIK--QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
E+EN+P P L K Q+ ++ G++Y + + +HRD+ N ++ + VK
Sbjct: 110 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 169
Query: 115 LCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSY 167
+ DFG R I + Y + RW +PE L D ++ DVW+ + W +
Sbjct: 170 IGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESL-KDGVFTTYSDVWSFGVVLWEIATL 227
Query: 168 SQIGFIGLGN 177
++ + GL N
Sbjct: 228 AEQPYQGLSN 237
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 15 AIRQATEATNKKEK----------RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLN-- 62
AI+ EA + +E+ + ++V LL V + + ++ E L
Sbjct: 53 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 112
Query: 63 ------ELENHPHGLPWDLIK--QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
E+EN+P P L K Q+ ++ G++Y + + +HRD+ N ++ + VK
Sbjct: 113 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 172
Query: 115 LCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSY 167
+ DFG R I + Y + RW +PE L D ++ DVW+ + W +
Sbjct: 173 IGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESL-KDGVFTTYSDVWSFGVVLWEIATL 230
Query: 168 SQIGFIGLGN 177
++ + GL N
Sbjct: 231 AEQPYQGLSN 240
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 15 AIRQATEATNKKEK----------RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLN-- 62
AI+ EA + +E+ + ++V LL V + + ++ E L
Sbjct: 52 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 111
Query: 63 ------ELENHPHGLPWDLIK--QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
E+EN+P P L K Q+ ++ G++Y + + +HRD+ N ++ + VK
Sbjct: 112 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 171
Query: 115 LCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSY 167
+ DFG R I + Y + RW +PE L D ++ DVW+ + W +
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESL-KDGVFTTYSDVWSFGVVLWEIATL 229
Query: 168 SQIGFIGLGN 177
++ + GL N
Sbjct: 230 AEQPYQGLSN 239
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 15 AIRQATEATNKKEK----------RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLN-- 62
AI+ EA + +E+ + ++V LL V + + ++ E L
Sbjct: 46 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 105
Query: 63 ------ELENHPHGLPWDLIK--QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
E+EN+P P L K Q+ ++ G++Y + + +HRD+ N ++ + VK
Sbjct: 106 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 165
Query: 115 LCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSY 167
+ DFG R I + Y + RW +PE L D ++ DVW+ + W +
Sbjct: 166 IGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESL-KDGVFTTYSDVWSFGVVLWEIATL 223
Query: 168 SQIGFIGLGN 177
++ + GL N
Sbjct: 224 AEQPYQGLSN 233
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTVLN--------ELENHPHGLPWDL--IKQITWQVL 84
++V LL V + + +V E H L E EN+P P L + Q+ ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYR 140
G++Y + +HRD+ N ++ + VK+ DFG R I Y + RW
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM- 199
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
APE L D ++ + D+W+ + W S ++ + GL N
Sbjct: 200 APESL-KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 15 AIRQATEATNKKEK----------RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLN-- 62
AI+ EA + +E+ + ++V LL V + + ++ E L
Sbjct: 52 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 111
Query: 63 ------ELENHPHGLPWDLIK--QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
E+EN+P P L K Q+ ++ G++Y + + +HRD+ N ++ + VK
Sbjct: 112 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 171
Query: 115 LCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSY 167
+ DFG R I + Y + RW +PE L D ++ DVW+ + W +
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESL-KDGVFTTYSDVWSFGVVLWEIATL 229
Query: 168 SQIGFIGLGN 177
++ + GL N
Sbjct: 230 AEQPYQGLSN 239
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 72/174 (41%), Gaps = 16/174 (9%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
SL H NL+ L V + +V E ++L+ L H + + QV G+
Sbjct: 77 SLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 135
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYR------AP 142
Y IHRD+ N+LL +VK+ DFG R + +N YV + AP
Sbjct: 136 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP--QNDDHYVMQEHRKVPFAWCAP 193
Query: 143 ELLVGDTLYGPAVDVWAIE---WTSHSYSQIGFIGLGNMGSHMARNLLKNNGRV 193
E L T + A D W W +Y Q +IGL GS + + K R+
Sbjct: 194 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLN--GSQILHKIDKEGERL 244
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL-NELENHPHGLPWDLIKQITWQVLRGV 87
R +H N++ L + K +L +V ++C+ + L + L + I Q RG+
Sbjct: 75 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGM 133
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFA 121
Y H + IHRD+K NI L + VK+ DFG A
Sbjct: 134 DYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 15 AIRQATEATNKKEK----------RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLN-- 62
AI+ EA + +E+ + ++V LL V + + ++ E L
Sbjct: 81 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 140
Query: 63 ------ELENHPHGLPWDLIK--QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
E+EN+P P L K Q+ ++ G++Y + + +HRD+ N ++ + VK
Sbjct: 141 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 200
Query: 115 LCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSY 167
+ DFG R I + Y + RW +PE L D ++ DVW+ + W +
Sbjct: 201 IGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESL-KDGVFTTYSDVWSFGVVLWEIATL 258
Query: 168 SQIGFIGLGN 177
++ + GL N
Sbjct: 259 AEQPYQGLSN 268
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 23/163 (14%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS-- 88
+HPN++ L V + ++ EF ++ L+ G + +I+ + +LRG++
Sbjct: 74 FEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVG--MLRGIASG 130
Query: 89 --YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVAT---------R 137
Y + +HRD+ NIL+ +N V K+ DFG +R + EN +D T R
Sbjct: 131 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLE--ENSSDPTETSSLGGKIPIR 188
Query: 138 WYRAPELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
W APE + + A D W+ + W S+ + + + N
Sbjct: 189 WT-APEAIAFRK-FTSASDAWSYGIVMWEVMSFGERPYWDMSN 229
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 8/138 (5%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
R +HPN++ L +V+ K ++LV E L + + + + V
Sbjct: 76 RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVE 135
Query: 89 YCHRHACIHRDIKPENILLTANG----VVKLCDFGFARLINPGEN--YTDYVATRWYRAP 142
Y H +HRD+KP NIL +++CDFGFA+ + EN T + AP
Sbjct: 136 YLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR-AENGLLMTPCYTANFVAP 194
Query: 143 ELLVGDTLYGPAVDVWAI 160
E+L Y D+W++
Sbjct: 195 EVLKRQG-YDEGCDIWSL 211
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 72/174 (41%), Gaps = 16/174 (9%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
SL H NL+ L V + +V E ++L+ L H + + QV G+
Sbjct: 71 SLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYR------AP 142
Y IHRD+ N+LL +VK+ DFG R + +N YV + AP
Sbjct: 130 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP--QNDDHYVMQEHRKVPFAWCAP 187
Query: 143 ELLVGDTLYGPAVDVWAIE---WTSHSYSQIGFIGLGNMGSHMARNLLKNNGRV 193
E L T + A D W W +Y Q +IGL GS + + K R+
Sbjct: 188 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLN--GSQILHKIDKEGERL 238
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 72/174 (41%), Gaps = 16/174 (9%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
SL H NL+ L V + +V E ++L+ L H + + QV G+
Sbjct: 71 SLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYR------AP 142
Y IHRD+ N+LL +VK+ DFG R + +N YV + AP
Sbjct: 130 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP--QNDDHYVMQEHRKVPFAWCAP 187
Query: 143 ELLVGDTLYGPAVDVWAIE---WTSHSYSQIGFIGLGNMGSHMARNLLKNNGRV 193
E L T + A D W W +Y Q +IGL GS + + K R+
Sbjct: 188 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLN--GSQILHKIDKEGERL 238
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 19/161 (11%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVS-- 88
+HPN++ L V + ++ EF ++ L+ G + +I+ + +LRG++
Sbjct: 72 FEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVG--MLRGIASG 128
Query: 89 --YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVAT-------RWY 139
Y + +HRD+ NIL+ +N V K+ DFG +R + + Y ++ RW
Sbjct: 129 MRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRW- 187
Query: 140 RAPELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
APE + + A D W+ + W S+ + + + N
Sbjct: 188 TAPEAIAFRK-FTSASDAWSYGIVMWEVMSFGERPYWDMSN 227
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 72/174 (41%), Gaps = 16/174 (9%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
SL H NL+ L V + +V E ++L+ L H + + QV G+
Sbjct: 67 SLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYR------AP 142
Y IHRD+ N+LL +VK+ DFG R + +N YV + AP
Sbjct: 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP--QNDDHYVMQEHRKVPFAWCAP 183
Query: 143 ELLVGDTLYGPAVDVWAIE---WTSHSYSQIGFIGLGNMGSHMARNLLKNNGRV 193
E L T + A D W W +Y Q +IGL GS + + K R+
Sbjct: 184 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLN--GSQILHKIDKEGERL 234
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 12/141 (8%)
Query: 27 EKRSL----KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITW- 81
EKR L K P L L F+ +L+ V E+ + +L H + Q +
Sbjct: 69 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNG---GDLMYHIQQVGKFKEPQAVFY 125
Query: 82 --QVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVATRW 138
++ G+ + H+ I+RD+K +N++L + G +K+ DFG + + G ++ T
Sbjct: 126 AAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPD 185
Query: 139 YRAPELLVGDTLYGPAVDVWA 159
Y APE++ YG +VD WA
Sbjct: 186 YIAPEIIAYQP-YGKSVDWWA 205
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQ----ITWQVL 84
+ L+HPN+V + + L +V E+ L L H G L ++ + + V
Sbjct: 89 KRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLL-HKSGAREQLDERRRLSMAYDVA 147
Query: 85 RGVSYCHRH--ACIHRDIKPENILLTANGVVKLCDFGFARL 123
+G++Y H +HRD+K N+L+ VK+CDFG +RL
Sbjct: 148 KGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 12/172 (6%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
SL H NL+ L V + +V E ++L+ L H + + QV G+
Sbjct: 77 SLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 135
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR----WYRAPEL 144
Y IHRD+ N+LL +VK+ DFG R + +++ R + APE
Sbjct: 136 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 195
Query: 145 LVGDTLYGPAVDVWAIE---WTSHSYSQIGFIGLGNMGSHMARNLLKNNGRV 193
L T + A D W W +Y Q +IGL GS + + K R+
Sbjct: 196 LKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLN--GSQILHKIDKEGERL 244
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 12/172 (6%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
SL H NL+ L V + +V E ++L+ L H + + QV G+
Sbjct: 67 SLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR----WYRAPEL 144
Y IHRD+ N+LL +VK+ DFG R + +++ R + APE
Sbjct: 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 185
Query: 145 LVGDTLYGPAVDVWAIE---WTSHSYSQIGFIGLGNMGSHMARNLLKNNGRV 193
L T + A D W W +Y Q +IGL GS + + K R+
Sbjct: 186 LKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLN--GSQILHKIDKEGERL 234
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL-NELENHPHGLPWDLIKQITWQVLRGV 87
R +H N++ L + K +L +V ++C+ + L + L + I Q RG+
Sbjct: 63 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGM 121
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFA 121
Y H + IHRD+K NI L + VK+ DFG A
Sbjct: 122 DYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 155
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 19/162 (11%)
Query: 7 KKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN 66
K + EA Q + K L+H LV L V ++ + +V E+ L +
Sbjct: 41 KPGTMSPEAFLQEAQVMKK-----LRHEKLVQLYAVVS-EEPIXIVTEYMSKGSLLDFLK 94
Query: 67 HPHG--LPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLI 124
G L + + Q+ G++Y R +HRD++ NIL+ N V K+ DFG ARLI
Sbjct: 95 GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLI 154
Query: 125 NPGENYTDYVA---TRWYRAPELLVGDTLYGPAV---DVWAI 160
E A +W APE LYG DVW+
Sbjct: 155 EDNEXTARQGAKFPIKW-TAPEA----ALYGRFTIKSDVWSF 191
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 72/174 (41%), Gaps = 16/174 (9%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
SL H NL+ L V + +V E ++L+ L H + + QV G+
Sbjct: 67 SLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYR------AP 142
Y IHRD+ N+LL +VK+ DFG R + +N YV + AP
Sbjct: 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP--QNDDHYVMQEHRKVPFAWCAP 183
Query: 143 ELLVGDTLYGPAVDVWAIE---WTSHSYSQIGFIGLGNMGSHMARNLLKNNGRV 193
E L T + A D W W +Y Q +IGL GS + + K R+
Sbjct: 184 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLN--GSQILHKIDKEGERL 234
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Query: 49 LHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILL 107
L LV E+ L + L H GL L+ Q+ G++Y H IHRD+ N+LL
Sbjct: 110 LQLVMEYVPLGSLRDYLPRHSIGLAQLLL--FAQQICEGMAYLHAQHYIHRDLAARNVLL 167
Query: 108 TANGVVKLCDFGFARLINPG-ENY---TDYVATRWYRAPELLVGDTLYGPAVDVWAIEWT 163
+ +VK+ DFG A+ + G E Y D + ++ APE L Y A DVW+ T
Sbjct: 168 DNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYY-ASDVWSFGVT 226
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 31 LKHPNLVNLLEVF-RRKKKLHLVFEF-CDHTVLNELENHPHG-LPWDLIKQITWQVLRGV 87
L+H NLV LL V K L++V E+ ++++ L + L D + + + V +
Sbjct: 71 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 130
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
Y + +HRD+ N+L++ + V K+ DFG + + ++ T + +W APE L
Sbjct: 131 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEALR- 187
Query: 148 DTLYGPAVDVWA---IEWTSHSYSQIGF 172
+ + DVW+ + W +S+ ++ +
Sbjct: 188 EKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
+ L +P +V ++ + + + LV E + LN+ L+ + H ++I ++ QV G+
Sbjct: 67 QQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNII-ELVHQVSMGM 124
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGEN-YTDYVATRW---YRAPE 143
Y +HRD+ N+LL K+ DFG ++ + EN Y +W + APE
Sbjct: 125 KYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE 184
Query: 144 LLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGL 175
+ + DVW+ + W + SY Q + G+
Sbjct: 185 -CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 15 AIRQATEATNKKEK----------RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLN-- 62
AI+ EA + +E+ + ++V LL V + + ++ E L
Sbjct: 59 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 118
Query: 63 ------ELENHPHGLPWDLIK--QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
E+EN+P P L K Q+ ++ G++Y + + +HRD+ N ++ + VK
Sbjct: 119 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 178
Query: 115 LCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSY 167
+ DFG R I + Y + RW +PE L D ++ DVW+ + W +
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESL-KDGVFTTYSDVWSFGVVLWEIATL 236
Query: 168 SQIGFIGLGN 177
++ + GL N
Sbjct: 237 AEQPYQGLSN 246
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 17/139 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN--HPHGLPWDLIKQI--TWQVL 84
R HP++V L+ V + + ++ E C L EL + DL I +Q+
Sbjct: 446 RQFDHPHIVKLIGVIT-ENPVWIIMELC---TLGELRSFLQVRKFSLDLASLILYAYQLS 501
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW-----Y 139
++Y +HRDI N+L+++N VKL DFG +R + E+ T Y A++ +
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKW 558
Query: 140 RAPELLVGDTLYGPAVDVW 158
APE + + A DVW
Sbjct: 559 MAPE-SINFRRFTSASDVW 576
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Query: 32 KHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCH 91
+HPN++ L +V+ K ++LV E L + + + + V Y H
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 92 RHACIHRDIKPENILLTANG----VVKLCDFGFARLINPGEN--YTDYVATRWYRAPELL 145
+HRD+KP NIL +++CDFGFA+ + EN T + APE+L
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLR-AENGLLMTPCYTANFVAPEVL 197
Query: 146 VGDTLYGPAVDVWAI 160
Y D+W++
Sbjct: 198 KRQG-YDEGCDIWSL 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
R HP++V L+ V + + ++ E C L L+ + L + +Q+ +
Sbjct: 94 RQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 152
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW-----YRAP 142
+Y +HRDI N+L+++N VKL DFG +R + E+ T Y A++ + AP
Sbjct: 153 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 209
Query: 143 ELLVGDTLYGPAVDVW 158
E + + A DVW
Sbjct: 210 E-SINFRRFTSASDVW 224
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Query: 42 VFRRKKKLHLVFEF-CDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDI 100
F+ + L+LV E+ +L L +P ++ + +++ + HR +HRDI
Sbjct: 129 AFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDI 188
Query: 101 KPENILLTANGVVKLCDFGFARLINPGENYTDYVA--TRWYRAPELL 145
KP+NILL G ++L DFG + VA T Y +PE+L
Sbjct: 189 KPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEIL 235
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTVLN--------ELENHPHGLPWDL--IKQITWQVL 84
++V LL V + + +V E H L E EN+P P L + Q+ ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYR 140
G++Y + +HRD+ N ++ + VK+ DFG R I + + RW
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM- 199
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
APE L D ++ + D+W+ + W S ++ + GL N
Sbjct: 200 APESL-KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
R HP++V L+ V + + ++ E C L L+ + L + +Q+ +
Sbjct: 71 RQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 129
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW-----YRAP 142
+Y +HRDI N+L+++N VKL DFG +R + E+ T Y A++ + AP
Sbjct: 130 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 186
Query: 143 ELLVGDTLYGPAVDVW 158
E + + A DVW
Sbjct: 187 E-SINFRRFTSASDVW 201
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 46 KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPEN 104
+K + LV E+ L + L H GL L+ Q+ G++Y H IHR + N
Sbjct: 85 EKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL--FAQQICEGMAYLHAQHYIHRALAARN 142
Query: 105 ILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+LL + +VK+ DFG A+ + G Y D + ++ APE L Y A DVW+
Sbjct: 143 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYY-ASDVWSF 201
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTVLN--------ELENHPHGLPWDL--IKQITWQVL 84
++V LL V + + +V E H L E EN+P P L + Q+ ++
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYR 140
G++Y + +HRD+ N ++ + VK+ DFG R I + + RW
Sbjct: 138 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM- 196
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
APE L D ++ + D+W+ + W S ++ + GL N
Sbjct: 197 APESL-KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 235
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 46 KKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPEN 104
+K + LV E+ L + L H GL L+ Q+ G++Y H IHR + N
Sbjct: 84 EKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL--FAQQICEGMAYLHAQHYIHRALAARN 141
Query: 105 ILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWAI 160
+LL + +VK+ DFG A+ + G Y D + ++ APE L Y A DVW+
Sbjct: 142 VLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYY-ASDVWSF 200
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
R HP++V L+ V + + ++ E C L L+ + L + +Q+ +
Sbjct: 69 RQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 127
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW-----YRAP 142
+Y +HRDI N+L+++N VKL DFG +R + E+ T Y A++ + AP
Sbjct: 128 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 184
Query: 143 ELLVGDTLYGPAVDVW 158
E + + A DVW
Sbjct: 185 E-SINFRRFTSASDVW 199
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 31 LKHPNLVNLLEVF-RRKKKLHLVFEF-CDHTVLNELENHPHG-LPWDLIKQITWQVLRGV 87
L+H NLV LL V K L++V E+ ++++ L + L D + + + V +
Sbjct: 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 115
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
Y + +HRD+ N+L++ + V K+ DFG + + ++ T + +W APE L
Sbjct: 116 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEAL-R 172
Query: 148 DTLYGPAVDVWA---IEWTSHSYSQIGF 172
+ + DVW+ + W +S+ ++ +
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTVLN--------ELENHPHGLPWDL--IKQITWQVL 84
++V LL V + + +V E H L E EN+P P L + Q+ ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYR 140
G++Y + +HRD+ N ++ + VK+ DFG R I + + RW
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM- 199
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
APE L D ++ + D+W+ + W S ++ + GL N
Sbjct: 200 APESL-KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 31 LKHPNLVNLLEVF-RRKKKLHLVFEF-CDHTVLNELENHPHG-LPWDLIKQITWQVLRGV 87
L+H NLV LL V K L++V E+ ++++ L + L D + + + V +
Sbjct: 243 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 302
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRAPELLVG 147
Y + +HRD+ N+L++ + V K+ DFG + + ++ T + +W APE L
Sbjct: 303 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEALR- 359
Query: 148 DTLYGPAVDVWA---IEWTSHSYSQIGF 172
+ + DVW+ + W +S+ ++ +
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYSFGRVPY 387
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
R HP++V L+ V + + ++ E C L L+ + L + +Q+ +
Sbjct: 68 RQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 126
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW-----YRAP 142
+Y +HRDI N+L+++N VKL DFG +R + E+ T Y A++ + AP
Sbjct: 127 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 183
Query: 143 ELLVGDTLYGPAVDVW 158
E + + A DVW
Sbjct: 184 E-SINFRRFTSASDVW 198
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
R HP++V L+ V + + ++ E C L L+ + L + +Q+ +
Sbjct: 66 RQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 124
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW-----YRAP 142
+Y +HRDI N+L+++N VKL DFG +R + E+ T Y A++ + AP
Sbjct: 125 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 181
Query: 143 ELLVGDTLYGPAVDVW 158
E + + A DVW
Sbjct: 182 E-SINFRRFTSASDVW 196
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
R HP++V L+ V + + ++ E C L L+ + L + +Q+ +
Sbjct: 66 RQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 124
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW-----YRAP 142
+Y +HRDI N+L+++N VKL DFG +R + E+ T Y A++ + AP
Sbjct: 125 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 181
Query: 143 ELLVGDTLYGPAVDVW 158
E + + A DVW
Sbjct: 182 E-SINFRRFTSASDVW 196
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTVLN--------ELENHPHGLPWDL--IKQITWQVL 84
++V LL V + + +V E H L E EN+P P L + Q+ ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYR 140
G++Y + +HR++ N ++ + VK+ DFG R I + Y + RW
Sbjct: 141 DGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM- 199
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
APE L D ++ + D+W+ + W S ++ + GL N
Sbjct: 200 APESL-KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITWQVLRGV 87
R HP++V L+ V + + ++ E C L L+ + L + +Q+ +
Sbjct: 63 RQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 121
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW-----YRAP 142
+Y +HRDI N+L+++N VKL DFG +R + E+ T Y A++ + AP
Sbjct: 122 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAP 178
Query: 143 ELLVGDTLYGPAVDVW 158
E + + A DVW
Sbjct: 179 E-SINFRRFTSASDVW 193
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 35 NLVNLLEVFRRKKKLHLVFEFCDHTVLN--------ELENHPHGLPWDL--IKQITWQVL 84
++V LL V + + +V E H L E EN+P P L + Q+ ++
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY----TDYVATRWYR 140
G++Y + +HR++ N ++ + VK+ DFG R I + Y + RW
Sbjct: 142 DGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM- 200
Query: 141 APELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIGLGN 177
APE L D ++ + D+W+ + W S ++ + GL N
Sbjct: 201 APESL-KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 239
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 29/190 (15%)
Query: 15 AIRQATEATNKKEK----------RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLN-- 62
AI+ EA + +E+ + ++V LL V + + ++ E L
Sbjct: 46 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 105
Query: 63 ------ELENHPHGLPWDLIK--QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
E+EN+P P L K Q+ ++ G++Y + + +HRD+ N + + VK
Sbjct: 106 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVK 165
Query: 115 LCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSY 167
+ DFG R I + Y + RW +PE L D ++ DVW+ + W +
Sbjct: 166 IGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESL-KDGVFTTYSDVWSFGVVLWEIATL 223
Query: 168 SQIGFIGLGN 177
++ + GL N
Sbjct: 224 AEQPYQGLSN 233
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 28/150 (18%)
Query: 27 EKRSL----KHPNLVNLLEVFRRKKKLHLVFEFCD------HTVLNELENHPHGLPWDLI 76
EKR L K P L L F+ +L+ V E+ + H PH + +
Sbjct: 70 EKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY--- 126
Query: 77 KQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVAT 136
++ G+ + I+RD+K +N++L + G +K+ DFG + EN D V T
Sbjct: 127 ---AAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK-----ENIWDGVTT 178
Query: 137 RW------YRAPELLVGDTLYGPAVDVWAI 160
+ Y APE++ YG +VD WA
Sbjct: 179 KXFCGTPDYIAPEIIAYQP-YGKSVDWWAF 207
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 88/248 (35%), Gaps = 43/248 (17%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL----------KHPNLVNLLEVFRRKKKLHLV 52
F+ K ++ Y A++ E + E R L HP+++ L + L L+
Sbjct: 45 FHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLI 104
Query: 53 FEFCDHTVLNELE----------------------NHP--HGLPWDLIKQITWQVLRGVS 88
E+ + L +HP L + WQ+ +G+
Sbjct: 105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQ 164
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT----DYVATRWYRAPEL 144
Y +HRD+ NIL+ +K+ DFG +R + ++Y + +W L
Sbjct: 165 YLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESL 224
Query: 145 LVGDTLYGPAVDVWAIEWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILKSDSLDS 204
D +Y DVW+ +G + NLLK R+ + D+
Sbjct: 225 F--DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRME---RPDNCSE 279
Query: 205 ETWDLTWQ 212
E + L Q
Sbjct: 280 EMYRLMLQ 287
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 12/139 (8%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEK--RSLKHPNLVNLLEVFRR----KKKLHLVFEFC 56
FNK+ + + + ++ +A + E R+ + P++V +++V+ +K L +V E
Sbjct: 38 FNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97
Query: 57 DH-TVLNELENH-PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTA---NG 111
D + + +++ +I + + Y H HRD+KPEN+L T+ N
Sbjct: 98 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 157
Query: 112 VVKLCDFGFARLINPGENY 130
++KL DFGFA+ GE Y
Sbjct: 158 ILKLTDFGFAKETT-GEKY 175
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN--HPHGLPWDLIKQI--TWQVL 84
R HP++V L+ V + + ++ E C L EL + DL I +Q+
Sbjct: 446 RQFDHPHIVKLIGVIT-ENPVWIIMELC---TLGELRSFLQVRKFSLDLASLILYAYQLS 501
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW-----Y 139
++Y +HRDI N+L++A VKL DFG +R + E+ T Y A++ +
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKW 558
Query: 140 RAPELLVGDTLYGPAVDVW 158
APE + + A DVW
Sbjct: 559 MAPE-SINFRRFTSASDVW 576
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
SL H ++V LL + L LV ++ ++L+ + H L L+ Q+ +G+
Sbjct: 71 SLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMY 129
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDY 133
Y H +HR++ N+LL + V++ DFG A L+ P + Y
Sbjct: 130 YLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY 174
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 30 SLKHPNLVNLLEVFRRKKKLHLVFEFCD-HTVLNELENHPHGLPWDLIKQITWQVLRGVS 88
SL H ++V LL + L LV ++ ++L+ + H L L+ Q+ +G+
Sbjct: 89 SLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMY 147
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDY 133
Y H +HR++ N+LL + V++ DFG A L+ P + Y
Sbjct: 148 YLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY 192
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 29/190 (15%)
Query: 15 AIRQATEATNKKEK----------RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLN-- 62
AI+ EA + +E+ + ++V LL V + + ++ E L
Sbjct: 44 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 103
Query: 63 ------ELENHPHGLPWDLIK--QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
E+EN+P P L K Q+ ++ G++Y + + +HRD+ N ++ + VK
Sbjct: 104 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 163
Query: 115 LCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSY 167
+ DFG R I + + RW +PE L D ++ DVW+ + W +
Sbjct: 164 IGDFGMTRDIXETDXXRKGGKGLLPVRWM-SPESL-KDGVFTTYSDVWSFGVVLWEIATL 221
Query: 168 SQIGFIGLGN 177
++ + GL N
Sbjct: 222 AEQPYQGLSN 231
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQ----ITWQVL 84
+ L+HPN+V + + L +V E+ L L H G L ++ + + V
Sbjct: 89 KRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLL-HKSGAREQLDERRRLSMAYDVA 147
Query: 85 RGVSYCHRH--ACIHRDIKPENILLTANGVVKLCDFGFARL 123
+G++Y H +HR++K N+L+ VK+CDFG +RL
Sbjct: 148 KGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 29/190 (15%)
Query: 15 AIRQATEATNKKEK----------RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLN-- 62
AI+ EA + +E+ + ++V LL V + + ++ E L
Sbjct: 53 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 112
Query: 63 ------ELENHPHGLPWDLIK--QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
E+EN+P P L K Q+ ++ G++Y + + +HRD+ N ++ + VK
Sbjct: 113 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 172
Query: 115 LCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSY 167
+ DFG R I + + RW +PE L D ++ DVW+ + W +
Sbjct: 173 IGDFGMTRDIXETDXXRKGGKGLLPVRWM-SPESL-KDGVFTTYSDVWSFGVVLWEIATL 230
Query: 168 SQIGFIGLGN 177
++ + GL N
Sbjct: 231 AEQPYQGLSN 240
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLP--WDLIK--QITWQVL 84
R +H N++ L + K +L +V ++C+ + L +H H + +++IK I Q
Sbjct: 87 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGS---SLYHHLHIIETKFEMIKLIDIARQTA 142
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA 121
+G+ Y H + IHRD+K NI L + VK+ DFG A
Sbjct: 143 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLP--WDLIK--QITWQVL 84
R +H N++ L + K +L +V ++C+ + L +H H + +++IK I Q
Sbjct: 86 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGS---SLYHHLHIIETKFEMIKLIDIARQTA 141
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA 121
+G+ Y H + IHRD+K NI L + VK+ DFG A
Sbjct: 142 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLP--WDLIK--QITWQVL 84
R +H N++ L + K +L +V ++C+ + L +H H + +++IK I Q
Sbjct: 64 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGS---SLYHHLHIIETKFEMIKLIDIARQTA 119
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA 121
+G+ Y H + IHRD+K NI L + VK+ DFG A
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLP--WDLIK--QITWQVL 84
R +H N++ L + K +L +V ++C+ + L +H H + +++IK I Q
Sbjct: 87 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGS---SLYHHLHIIETKFEMIKLIDIARQTA 142
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA 121
+G+ Y H + IHRD+K NI L + VK+ DFG A
Sbjct: 143 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLP--WDLIK--QITWQVL 84
R +H N++ L + K +L +V ++C+ + L +H H + +++IK I Q
Sbjct: 79 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGS---SLYHHLHIIETKFEMIKLIDIARQTA 134
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA 121
+G+ Y H + IHRD+K NI L + VK+ DFG A
Sbjct: 135 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 19/147 (12%)
Query: 28 KRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN----HPHGLPWDLIKQITWQV 83
+ S +HPN++ + ++ ++ E C T+ +E H P L++Q T
Sbjct: 72 RESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTT--- 128
Query: 84 LRGVSYCHRHACIHRDIKPENILLT---ANGVVK--LCDFGFARLINPGENY----TDYV 134
G+++ H +HRD+KP NIL++ A+G +K + DFG + + G + +
Sbjct: 129 -SGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP 187
Query: 135 ATRWYRAPELLVGDTLYGP--AVDVWA 159
T + APE+L D P VD+++
Sbjct: 188 GTEGWIAPEMLSEDCKENPTYTVDIFS 214
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVL-NELENHPHGLPWDLIKQITWQVLRGV 87
R +H N++ L + +L +V ++C+ + L + L + I Q RG+
Sbjct: 75 RKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGM 133
Query: 88 SYCHRHACIHRDIKPENILLTANGVVKLCDFGFA 121
Y H + IHRD+K NI L + VK+ DFG A
Sbjct: 134 DYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLP--WDLIK--QITWQVL 84
R +H N++ L + K +L +V ++C+ + L +H H + +++IK I Q
Sbjct: 64 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGS---SLYHHLHIIETKFEMIKLIDIARQTA 119
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA 121
+G+ Y H + IHRD+K NI L + VK+ DFG A
Sbjct: 120 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN--HPHGLPWDLIKQI--TWQVL 84
R HP++V L+ V + + ++ E C L EL + DL I +Q+
Sbjct: 66 RQFDHPHIVKLIGVIT-ENPVWIIMELC---TLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW-----Y 139
++Y +HRDI N+L++A VKL DFG +R + E+ T Y A++ +
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKW 178
Query: 140 RAPELLVGDTLYGPAVDVW 158
APE + + A DVW
Sbjct: 179 MAPE-SINFRRFTSASDVW 196
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLP--WDLIK--QITWQVL 84
R +H N++ L + K +L +V ++C+ + L +H H + +++IK I Q
Sbjct: 59 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGS---SLYHHLHIIETKFEMIKLIDIARQTA 114
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA 121
+G+ Y H + IHRD+K NI L + VK+ DFG A
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLP--WDLIK--QITWQVL 84
R +H N++ L + K +L +V ++C+ + L +H H + +++IK I Q
Sbjct: 61 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGS---SLYHHLHIIETKFEMIKLIDIARQTA 116
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA 121
+G+ Y H + IHRD+K NI L + VK+ DFG A
Sbjct: 117 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 153
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLP--WDLIK--QITWQVL 84
R +H N++ L + K +L +V ++C+ + L +H H + +++IK I Q
Sbjct: 59 RKTRHVNIL-LFMGYSTKPQLAIVTQWCEGS---SLYHHLHIIETKFEMIKLIDIARQTA 114
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA 121
+G+ Y H + IHRD+K NI L + VK+ DFG A
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 18/145 (12%)
Query: 27 EKRSL----KHPNLVNLLEVFRRKKKLHLVFEFCD------HTVLNELENHPHGLPWDLI 76
EKR L K P L L F+ +L+ V E+ + H PH + +
Sbjct: 391 EKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY--- 447
Query: 77 KQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARL-INPGENYTDYVA 135
++ G+ + I+RD+K +N++L + G +K+ DFG + I G +
Sbjct: 448 ---AAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCG 504
Query: 136 TRWYRAPELLVGDTLYGPAVDVWAI 160
T Y APE++ YG +VD WA
Sbjct: 505 TPDYIAPEIIAYQP-YGKSVDWWAF 528
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 82 QVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRA 141
+++ G+ + H ++RD+KP NILL +G V++ D G A + + + V T Y A
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMA 358
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+L Y + D +++
Sbjct: 359 PEVLQKGVAYDSSADWFSL 377
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 82 QVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRA 141
+++ G+ + H ++RD+KP NILL +G V++ D G A + + + V T Y A
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMA 358
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+L Y + D +++
Sbjct: 359 PEVLQKGVAYDSSADWFSL 377
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 82 QVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRA 141
+++ G+ + H ++RD+KP NILL +G V++ D G A + + + V T Y A
Sbjct: 300 EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMA 358
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+L Y + D +++
Sbjct: 359 PEVLQKGVAYDSSADWFSL 377
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 82 QVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRWYRA 141
+++ G+ + H ++RD+KP NILL +G V++ D G A + + + V T Y A
Sbjct: 299 EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMA 357
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE+L Y + D +++
Sbjct: 358 PEVLQKGVAYDSSADWFSL 376
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 31 LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYC 90
HPN+++L V + + ++ EF ++ L+ G + +I+ + +LRG++
Sbjct: 65 FDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG-QFTVIQLVG--MLRGIAAG 121
Query: 91 HRHAC----IHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDY-------VATRWY 139
++ +HR + NIL+ +N V K+ DFG +R + + Y + RW
Sbjct: 122 MKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW- 180
Query: 140 RAPELLVGDTLYGPAVDVWA---IEWTSHSYSQ 169
APE + + A DVW+ + W SY +
Sbjct: 181 TAPE-AIQYRKFTSASDVWSYGIVMWEVMSYGE 212
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 52/158 (32%)
Query: 51 LVFEFCDHTVLNEL-ENHPHGLPWDLIKQITWQVLRGVSYCHRHA-CIHRDIKPENILLT 108
+VFE H +L + +++ GLP +K I QVL+G+ Y H IH DIKPENIL+
Sbjct: 116 MVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMC 175
Query: 109 ANGV-----------------------------------------------VKLCDFGFA 121
+ VK+ D G A
Sbjct: 176 VDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNA 235
Query: 122 RLINPGENYTDYVATRWYRAPELLVGDTLYGPAVDVWA 159
++ +++T+ + TR YR+ E+L+G PA D+W+
Sbjct: 236 CWVH--KHFTEDIQTRQYRSIEVLIGAGYSTPA-DIWS 270
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 32/145 (22%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN----------HPHGLPWDLIKQITWQ 82
HPN++ + L++ E C+ + + +E+ P L++QI
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA-- 143
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTA-------------NGVVKLCDFGFARLINPGE- 128
GV++ H IHRD+KP+NIL++ N + + DFG + ++ G+
Sbjct: 144 --SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 129 ----NYTDYVATRWYRAPELLVGDT 149
N + T +RAPELL T
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEEST 226
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 32/145 (22%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN----------HPHGLPWDLIKQITWQ 82
HPN++ + L++ E C+ + + +E+ P L++QI
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA-- 143
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTA-------------NGVVKLCDFGFARLINPGE- 128
GV++ H IHRD+KP+NIL++ N + + DFG + ++ G+
Sbjct: 144 --SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 129 ----NYTDYVATRWYRAPELLVGDT 149
N + T +RAPELL T
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEEST 226
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 32/141 (22%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN----------HPHGLPWDLIKQITWQ 82
HPN++ + L++ E C+ + + +E+ P L++QI
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA-- 125
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTA-------------NGVVKLCDFGFARLINPGE- 128
GV++ H IHRD+KP+NIL++ N + + DFG + ++ G+
Sbjct: 126 --SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS 183
Query: 129 ----NYTDYVATRWYRAPELL 145
N + T +RAPELL
Sbjct: 184 SFRTNLNNPSGTSGWRAPELL 204
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 32/141 (22%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN----------HPHGLPWDLIKQITWQ 82
HPN++ + L++ E C+ + + +E+ P L++QI
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA-- 125
Query: 83 VLRGVSYCHRHACIHRDIKPENILLTA-------------NGVVKLCDFGFARLINPGE- 128
GV++ H IHRD+KP+NIL++ N + + DFG + ++ G+
Sbjct: 126 --SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 183
Query: 129 ----NYTDYVATRWYRAPELL 145
N + T +RAPELL
Sbjct: 184 XFRXNLNNPSGTSGWRAPELL 204
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELEN--HPHGLPWDLIKQI--TWQVL 84
R HP++V L+ V + + ++ E C L EL + DL I +Q+
Sbjct: 66 RQFDHPHIVKLIGVIT-ENPVWIIMELC---TLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATRW-----Y 139
++Y +HRDI N+L+++N VKL DFG +R + E+ T A++ +
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTXXKASKGKLPIKW 178
Query: 140 RAPELLVGDTLYGPAVDVW 158
APE + + A DVW
Sbjct: 179 MAPE-SINFRRFTSASDVW 196
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 30/148 (20%)
Query: 14 EAIRQATEATNKKEKRS------LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LEN 66
+A+++A+E+ + +R L+H ++V V + L +VFE+ H LN L +
Sbjct: 77 KALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRS 136
Query: 67 H--------------PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV 112
H P L + + QV G+ Y +HRD+ N L+ V
Sbjct: 137 HGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV 196
Query: 113 VKLCDFGFARLINPGENYTDYVATRWYR 140
VK+ DFG +R D +T +YR
Sbjct: 197 VKIGDFGMSR---------DIYSTDYYR 215
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 17/180 (9%)
Query: 5 KKKKSSYYKEAIRQATEATNKKEK-------RSLKHPNLVNLLEVFRRKKKLHLVFEFCD 57
+KK+ + ++Q TE + +E L +P +V L+ V + + L LV E
Sbjct: 360 RKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAG 418
Query: 58 HTVLNE-LENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLC 116
L++ L +P + ++ QV G+ Y +HR++ N+LL K+
Sbjct: 419 GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKIS 478
Query: 117 DFGFARLINPGEN-YTDYVATRW---YRAPELLVGDTLYGPAVDVWA---IEWTSHSYSQ 169
DFG ++ + ++ YT A +W + APE + + DVW+ W + SY Q
Sbjct: 479 DFGLSKALGADDSYYTARSAGKWPLKWYAPE-CINFRKFSSRSDVWSYGVTMWEALSYGQ 537
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 88/248 (35%), Gaps = 43/248 (17%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL----------KHPNLVNLLEVFRRKKKLHLV 52
F+ K ++ Y A++ E + E R L HP+++ L + L L+
Sbjct: 45 FHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLI 104
Query: 53 FEFCDHTVLNELE----------------------NHP--HGLPWDLIKQITWQVLRGVS 88
E+ + L +HP L + WQ+ +G+
Sbjct: 105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQ 164
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT----DYVATRWYRAPEL 144
Y + +HRD+ NIL+ +K+ DFG +R + ++ + +W L
Sbjct: 165 YLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESL 224
Query: 145 LVGDTLYGPAVDVWAIEWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILKSDSLDS 204
D +Y DVW+ +G + NLLK R+ + D+
Sbjct: 225 F--DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRME---RPDNCSE 279
Query: 205 ETWDLTWQ 212
E + L Q
Sbjct: 280 EMYRLMLQ 287
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 72 PWDLIKQITWQ-VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY 130
PW+ ++ W+ +L V H+H +H D+KP N L+ +G++KL DFG A + P
Sbjct: 154 PWE--RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210
Query: 131 T---DYVATRWYRAPELL 145
V T Y PE +
Sbjct: 211 VVKDSQVGTVNYMPPEAI 228
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 31/193 (16%)
Query: 14 EAIRQATEATNKKEKR------SLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE---- 63
+A++ T A K +R +L+H ++V V L +VFE+ H LN+
Sbjct: 51 KALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRA 110
Query: 64 --------LENHPHGLPWDL----IKQITWQVLRGVSYCHRHACIHRDIKPENILLTANG 111
++ P +L + I Q+ G+ Y +HRD+ N L+ AN
Sbjct: 111 HGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL 170
Query: 112 VVKLCDFGFARLINPGENYT----DYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTS 164
+VK+ DFG +R + + Y + RW PE ++ + DVW+ I W
Sbjct: 171 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM-PPESIMYRK-FTTESDVWSFGVILWEI 228
Query: 165 HSYSQIGFIGLGN 177
+Y + + L N
Sbjct: 229 FTYGKQPWFQLSN 241
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 71/180 (39%), Gaps = 17/180 (9%)
Query: 29 RSLKHPNLVNLLEVF-----RRKKKLHLVFEFCD----HTVL--NELENHPHGLPWDLIK 77
+ HPN++ LL V + K ++ F HT L + LE P +P +
Sbjct: 91 KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150
Query: 78 QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTD----Y 133
+ + G+ Y +HRD+ N +L + V + DFG ++ I G+ Y
Sbjct: 151 KFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAK 210
Query: 134 VATRWYRAPELLVGDTLYGPAVDVWAIEWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRV 193
+ +W L D +Y DVWA T + G + +H + L + R+
Sbjct: 211 MPVKWIAIESL--ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRL 268
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 14 EAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLP 72
++ R NK ++ S K ++ L + + +++V E C + LN L+ P
Sbjct: 71 DSYRNEIAYLNKLQQHSDK---IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDP 126
Query: 73 WDLIKQITWQ-VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
W+ ++ W+ +L V H+H +H D+KP N L+ +G++KL DFG A + P
Sbjct: 127 WE--RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSV 183
Query: 132 ---DYVATRWYRAPELL 145
V T Y PE +
Sbjct: 184 VKDSQVGTVNYMPPEAI 200
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 14 EAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLP 72
++ R NK ++ S K ++ L + + +++V E C + LN L+ P
Sbjct: 71 DSYRNEIAYLNKLQQHSDK---IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDP 126
Query: 73 WDLIKQITWQ-VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
W+ ++ W+ +L V H+H +H D+KP N L+ +G++KL DFG A + P
Sbjct: 127 WE--RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXV 183
Query: 132 ---DYVATRWYRAPELL 145
V T Y PE +
Sbjct: 184 VKDSQVGTVNYMPPEAI 200
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNELENHPHGLP--WDLIK--QITWQVL 84
R +H N++ L + +L +V ++C+ + L +H H + +++IK I Q
Sbjct: 59 RKTRHVNIL-LFMGYSTAPQLAIVTQWCEGS---SLYHHLHIIETKFEMIKLIDIARQTA 114
Query: 85 RGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA 121
+G+ Y H + IHRD+K NI L + VK+ DFG A
Sbjct: 115 QGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 72 PWDLIKQITWQ-VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY 130
PW+ ++ W+ +L V H+H +H D+KP N L+ +G++KL DFG A + P
Sbjct: 107 PWE--RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTS 163
Query: 131 T---DYVATRWYRAPELL 145
V T Y PE +
Sbjct: 164 VVKDSQVGTVNYMPPEAI 181
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 29 RSLKHPNLVNLLE----VFRRKKKLHLVFEFCDHTVLNELENHPHGLPWDLIKQITWQVL 84
+ L+HPN+V + + KK + LV E L +++ Q+L
Sbjct: 80 KGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQIL 139
Query: 85 RGVSYCHRHA--CIHRDIKPENILLTA-NGVVKLCDFGFARLINPGENYTDYVATRWYRA 141
+G+ + H IHRD+K +NI +T G VK+ D G A L + T + A
Sbjct: 140 KGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL-KRASFAKAVIGTPEFXA 198
Query: 142 PELLVGDTLYGPAVDVWAI 160
PE + Y +VDV+A
Sbjct: 199 PEXY--EEKYDESVDVYAF 215
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 30/192 (15%)
Query: 14 EAIRQATEATNKKEKRS------LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LEN 66
+A+++A+E+ + +R L+H ++V V + L +VFE+ H LN L +
Sbjct: 54 KALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRS 113
Query: 67 H--------------PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV 112
H P L + + QV G+ Y +HRD+ N L+ V
Sbjct: 114 HGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV 173
Query: 113 VKLCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSH 165
VK+ DFG +R I + Y + RW +L + DVW+ + W
Sbjct: 174 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK--FTTESDVWSFGVVLWEIF 231
Query: 166 SYSQIGFIGLGN 177
+Y + + L N
Sbjct: 232 TYGKQPWYQLSN 243
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 21/138 (15%)
Query: 14 EAIRQATEATNKKEKRS------LKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LEN 66
+A+++A+E+ + +R L+H ++V V + L +VFE+ H LN L +
Sbjct: 48 KALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRS 107
Query: 67 H--------------PHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANGV 112
H P L + + QV G+ Y +HRD+ N L+ V
Sbjct: 108 HGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLV 167
Query: 113 VKLCDFGFARLINPGENY 130
VK+ DFG +R I + Y
Sbjct: 168 VKIGDFGMSRDIYSTDYY 185
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 72 PWDLIKQITWQ-VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENY 130
PW+ ++ W+ +L V H+H +H D+KP N L+ +G++KL DFG A + P
Sbjct: 154 PWE--RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210
Query: 131 T---DYVATRWYRAPELL 145
V T Y PE +
Sbjct: 211 VVKDSQVGTVNYMPPEAI 228
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 14 EAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLP 72
++ R NK ++ S K ++ L + + +++V E C + LN L+ P
Sbjct: 55 DSYRNEIAYLNKLQQHSDK---IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDP 110
Query: 73 WDLIKQITWQ-VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
W+ ++ W+ +L V H+H +H D+KP N L+ +G++KL DFG A + P
Sbjct: 111 WE--RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSV 167
Query: 132 ---DYVATRWYRAPELL 145
V T Y PE +
Sbjct: 168 VKDSQVGTVNYMPPEAI 184
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 29/190 (15%)
Query: 15 AIRQATEATNKKEK----------RSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE- 63
AI+ EA + +E+ + ++V LL V + + ++ E L
Sbjct: 49 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 108
Query: 64 -------LENHPHGLPWDLIK--QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVK 114
+ N+P P L K Q+ ++ G++Y + + +HRD+ N ++ + VK
Sbjct: 109 LRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 168
Query: 115 LCDFGFARLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSY 167
+ DFG R I + Y + RW +PE L D ++ DVW+ + W +
Sbjct: 169 IGDFGMTRDIYETDYYRKGGKGLLPVRWM-SPESL-KDGVFTTYSDVWSFGVVLWEIATL 226
Query: 168 SQIGFIGLGN 177
++ + GL N
Sbjct: 227 AEQPYQGLSN 236
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 12/137 (8%)
Query: 14 EAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNE-LENHPHGLP 72
++ R NK ++ S K ++ L + + +++V E C + LN L+ P
Sbjct: 51 DSYRNEIAYLNKLQQHSDK---IIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDP 106
Query: 73 WDLIKQITWQ-VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
W+ ++ W+ +L V H+H +H D+KP N L+ +G++KL DFG A + P
Sbjct: 107 WE--RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV 163
Query: 132 ---DYVATRWYRAPELL 145
V T Y PE +
Sbjct: 164 VKDSQVGTVNYMPPEAI 180
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 87/248 (35%), Gaps = 43/248 (17%)
Query: 3 FNKKKKSSYYKEAIRQATEATNKKEKRSL----------KHPNLVNLLEVFRRKKKLHLV 52
F+ K ++ Y A++ E + E R L HP+++ L + L L+
Sbjct: 45 FHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLI 104
Query: 53 FEFCDHTVLNELE----------------------NHP--HGLPWDLIKQITWQVLRGVS 88
E+ + L +HP L + WQ+ +G+
Sbjct: 105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQ 164
Query: 89 YCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT----DYVATRWYRAPEL 144
Y +HRD+ NIL+ +K+ DFG +R + ++ + +W L
Sbjct: 165 YLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESL 224
Query: 145 LVGDTLYGPAVDVWAIEWTSHSYSQIGFIGLGNMGSHMARNLLKNNGRVTVILKSDSLDS 204
D +Y DVW+ +G + NLLK R+ + D+
Sbjct: 225 F--DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRME---RPDNCSE 279
Query: 205 ETWDLTWQ 212
E + L Q
Sbjct: 280 EMYRLMLQ 287
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 29 RSLKHPNLVNLLEVFRRK--KKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITW--QV 83
R+L H N+V + + L+ EF L E L + + + +L +Q+ + Q+
Sbjct: 78 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI--NLKQQLKYAVQI 135
Query: 84 LRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR-----W 138
+G+ Y +HRD+ N+L+ + VK+ DFG + I + R W
Sbjct: 136 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFW 195
Query: 139 YRAPELLVGDTLYGPAVDVWAIEWTSH 165
Y APE L+ Y A DVW+ T H
Sbjct: 196 Y-APECLMQSKFY-IASDVWSFGVTLH 220
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 64 LENHPHGLPWDLIK--QITWQVLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFA 121
+ N+P P L K Q+ ++ G++Y + + +HRD+ N ++ + VK+ DFG
Sbjct: 126 MANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 185
Query: 122 RLINPGENY----TDYVATRWYRAPELLVGDTLYGPAVDVWA---IEWTSHSYSQIGFIG 174
R I + Y + RW +PE L D ++ DVW+ + W + ++ + G
Sbjct: 186 RDIYETDYYRKGGKGLLPVRWM-SPESL-KDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 243
Query: 175 LGN 177
L N
Sbjct: 244 LSN 246
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 60/150 (40%), Gaps = 28/150 (18%)
Query: 5 KKKKSSYYKEAIRQATEATNKKEKRSLKHPNLVNLLEVFRRKKKLHLVFEFCDHTVLNEL 64
K + K+ R+A TN L+H ++V V L +VFE+ H LN+
Sbjct: 52 KDASDNARKDFHREAELLTN------LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 65 -------------ENHPHGLPWDLIKQITWQVLRGVSYCHRHACIHRDIKPENILLTANG 111
N P L + I Q+ G+ Y +HRD+ N L+ N
Sbjct: 106 LRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL 165
Query: 112 VVKLCDFGFARLINPGENYTDYVATRWYRA 141
+VK+ DFG +R D +T +YR
Sbjct: 166 LVKIGDFGMSR---------DVYSTDYYRV 186
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 29 RSLKHPNLVNLLEVFRRK--KKLHLVFEFCDHTVLNE-LENHPHGLPWDLIKQITW--QV 83
R+L H N+V + + L+ EF L E L + + + +L +Q+ + Q+
Sbjct: 66 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI--NLKQQLKYAVQI 123
Query: 84 LRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYTDYVATR-----W 138
+G+ Y +HRD+ N+L+ + VK+ DFG + I + R W
Sbjct: 124 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFW 183
Query: 139 YRAPELLVGDTLYGPAVDVWAIEWTSHS 166
Y APE L+ Y A DVW+ T H
Sbjct: 184 Y-APECLMQSKFY-IASDVWSFGVTLHE 209
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLV-FEFCDHTVL-NELENHPHGLPWDLIKQITWQVLRG 86
+ HPN+++LL + R + LV + H L N + N H + QV +G
Sbjct: 104 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 163
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
+ Y +HRD+ N +L VK+ DFG AR + E Y+
Sbjct: 164 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 208
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLV-FEFCDHTVL-NELENHPHGLPWDLIKQITWQVLRG 86
+ HPN+++LL + R + LV + H L N + N H + QV +G
Sbjct: 78 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 137
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
+ Y +HRD+ N +L VK+ DFG AR + E Y+
Sbjct: 138 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 182
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLV-FEFCDHTVL-NELENHPHGLPWDLIKQITWQVLRG 86
+ HPN+++LL + R + LV + H L N + N H + QV +G
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
+ Y +HRD+ N +L VK+ DFG AR + E Y+
Sbjct: 146 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 190
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLV-FEFCDHTVL-NELENHPHGLPWDLIKQITWQVLRG 86
+ HPN+++LL + R + LV + H L N + N H + QV +G
Sbjct: 81 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 140
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
+ Y +HRD+ N +L VK+ DFG AR + E Y+
Sbjct: 141 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 185
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 72 PWDLIKQITWQ-VLRGVSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINP 126
PW+ ++ W+ +L V H+H +H D+KP N L+ +G++KL DFG A + P
Sbjct: 154 PWE--RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLV-FEFCDHTVL-NELENHPHGLPWDLIKQITWQVLRG 86
+ HPN+++LL + R + LV + H L N + N H + QV +G
Sbjct: 84 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 143
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
+ Y +HRD+ N +L VK+ DFG AR + E Y+
Sbjct: 144 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 188
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLV-FEFCDHTVL-NELENHPHGLPWDLIKQITWQVLRG 86
+ HPN+++LL + R + LV + H L N + N H + QV +G
Sbjct: 105 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 164
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
+ Y +HRD+ N +L VK+ DFG AR + E Y+
Sbjct: 165 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 209
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLV-FEFCDHTVL-NELENHPHGLPWDLIKQITWQVLRG 86
+ HPN+++LL + R + LV + H L N + N H + QV +G
Sbjct: 83 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 142
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
+ Y +HRD+ N +L VK+ DFG AR + E Y+
Sbjct: 143 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 187
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLV-FEFCDHTVL-NELENHPHGLPWDLIKQITWQVLRG 86
+ HPN+++LL + R + LV + H L N + N H + QV +G
Sbjct: 85 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 144
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
+ Y +HRD+ N +L VK+ DFG AR + E Y+
Sbjct: 145 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 189
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLV-FEFCDHTVL-NELENHPHGLPWDLIKQITWQVLRG 86
+ HPN+++LL + R + LV + H L N + N H + QV +G
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 145
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFARLINPGENYT 131
+ Y +HRD+ N +L VK+ DFG AR + E Y+
Sbjct: 146 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 190
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 21/144 (14%)
Query: 35 NLVNLLEVFRRKKKLHLVFE-FCDHTVLNELENHPHGLPWDLIKQITWQVLRGVSYCHRH 93
N++ L+E F + +LVFE ++L ++ H ++ V + + H
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH-FNEREASRVVRDVAAALDFLHTK 130
Query: 94 ACIHRDIKPENILLTAN---GVVKLCDFGFAR----------LINPGENYTDYVATRWYR 140
HRD+KPENIL + VK+CDF + P T + Y
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTP--ELTTPCGSAEYM 188
Query: 141 APELLV----GDTLYGPAVDVWAI 160
APE++ T Y D+W++
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSL 212
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Query: 29 RSLKHPNLVNLLEVFRRKKKLHLV-FEFCDHTVL-NELENHPHGLPWDLIKQITWQVLRG 86
+ HPN+++LL + R + LV + H L N + N H + QV +G
Sbjct: 85 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG 144
Query: 87 VSYCHRHACIHRDIKPENILLTANGVVKLCDFGFAR 122
+ Y +HRD+ N +L VK+ DFG AR
Sbjct: 145 MKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELENHPHGLP---WDLIKQITWQVLRGVS 88
H NL+ L + LV+ + + +V + L P P W ++I RG++
Sbjct: 86 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 145
Query: 89 YCHRHA---CIHRDIKPENILLTANGVVKLCDFGFARLIN 125
Y H H IHRD+K NILL + DFG A+L++
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 33 HPNLVNLLEVFRRKKKLHLVFEF-CDHTVLNELENHPHGLP---WDLIKQITWQVLRGVS 88
H NL+ L + LV+ + + +V + L P P W ++I RG++
Sbjct: 94 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 153
Query: 89 YCHRHA---CIHRDIKPENILLTANGVVKLCDFGFARLIN 125
Y H H IHRD+K NILL + DFG A+L++
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 193
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,675,820
Number of Sequences: 62578
Number of extensions: 419645
Number of successful extensions: 2995
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1119
Number of HSP's gapped (non-prelim): 1143
length of query: 303
length of database: 14,973,337
effective HSP length: 98
effective length of query: 205
effective length of database: 8,840,693
effective search space: 1812342065
effective search space used: 1812342065
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)