BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7630
(160 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|241567430|ref|XP_002402293.1| conserved hypothetical protein [Ixodes scapularis]
gi|215501983|gb|EEC11477.1| conserved hypothetical protein [Ixodes scapularis]
Length = 345
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 42 DWLHIYTDGSLINPEDG-AGAGIFCELFS--FYKRLGTFTTNFDGEIAAIKIALLQILNR 98
DWLH++TDGS ++P G A A +F +RL ++ E+AAI+ L ++
Sbjct: 65 DWLHVFTDGS-VDPVRGTASAAVFIPHIGRRLAERLTFHASSTTAELAAIETGLRELFPW 123
Query: 99 TNQFERAVILSDSKAAI 115
RAV+LSDS+ A+
Sbjct: 124 PPG--RAVVLSDSRTAL 138
>gi|312376130|gb|EFR23313.1| hypothetical protein AND_13122 [Anopheles darlingi]
Length = 361
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 43 WLHIYTDGSLINPEDGAGAGIFCEL--FSFYKRLGTFTTNFDGEIAAIKIALLQILNRTN 100
W+HIYTD S +P+ G G++ E +L T+ E AIK+A+ I +R
Sbjct: 173 WVHIYTDASK-SPDGQCGIGVYDETNDVRIALQLALDTSIMTAETLAIKVAMQHIADRG- 230
Query: 101 QFERAVILSDSKAA 114
RAV+L+DS+AA
Sbjct: 231 -IRRAVLLTDSQAA 243
>gi|307107204|gb|EFN55447.1| hypothetical protein CHLNCDRAFT_52244 [Chlorella variabilis]
Length = 843
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 19/112 (16%)
Query: 23 PLIAKTMALETINTRYPSDDW-LHIYTDGSLINPEDGA--GAGIFCELFSFYKRLGTFTT 79
P +A+ L P +W L +TDGS+ E+ A GA ++ YK T
Sbjct: 595 PPVAQLQQLYGSQQHRPRYEWRLAFFTDGSVQATEEAALVGAAVWHSTLGAYK----INT 650
Query: 80 NFDG--------EIAAIKIALLQILNRTNQFERAVILSDSKAAIHPMN-SVH 122
N DG E+AAI + Q L RT++ VI +DS+AAIH ++ +VH
Sbjct: 651 NGDGPDNTITRAELAAIFCTVAQRLPRTDE---GVIFTDSQAAIHLLHRAVH 699
>gi|342880420|gb|EGU81546.1| hypothetical protein FOXB_07941 [Fusarium oxysporum Fo5176]
Length = 182
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 11/83 (13%)
Query: 42 DWLHIYTDGSLINPEDGAGAGIFC----ELFSFYKRLGTFTTNFDGEIAAIKIALLQILN 97
D +HIYTDGS IN G GA C E S Y T +T + GE+ I +A LQI
Sbjct: 91 DAIHIYTDGSGIN--GGVGAAAVCTTTQETKSAYMGDDTTSTVYAGELQGISLA-LQIAQ 147
Query: 98 ----RTNQFERAVILSDSKAAIH 116
+ N+ + +I +D++AAI
Sbjct: 148 EDRTKGNRRSKVMIYTDNQAAIR 170
>gi|2708267|gb|AAB92394.1| putative reverse transcriptase [Drosophila subobscura]
Length = 675
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 41 DDWL----------HIYTDGSLINPEDGAGAGIFCELF--SFYKRLGTFTTNFDGEIAAI 88
+DWL I+TDGS + ++ G GI+ EL S+ RL + F E+ AI
Sbjct: 382 NDWLEGPPGPKEAIQIFTDGSKL--DNKVGGGIYSELLNISYSFRLPDHCSVFQAEVIAI 439
Query: 89 KIALLQILNRTNQFERAVILSDSKAAIHPMNSVHLNS 125
K AL + T + I SDS+AAI +N++ +S
Sbjct: 440 KEALSCLQELTPEATYINIYSDSQAAIKSLNAITTSS 476
>gi|56963779|ref|YP_175510.1| ribonuclease HI [Bacillus clausii KSM-K16]
gi|56910022|dbj|BAD64549.1| ribonuclease HI [Bacillus clausii KSM-K16]
Length = 133
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 14/107 (13%)
Query: 44 LHIYTDGSLINPEDGAGAGIF----CELFSFYKRLGTFTTNFDGEIAAIKIALLQILNRT 99
+H+YTDG+ +GAG+ E F LG TN + E AA+ IAL L +
Sbjct: 2 IHVYTDGASAGNPGPSGAGLVFIKDGEAQEFRFHLGD-KTNHEAEFAAVDIALELCLQK- 59
Query: 100 NQFERAVILSDSKAAIHPMNSVHLNSCPALEASNDIVGTLCSVLNKI 146
++++ + +DSK + H+ + G LCS+L+KI
Sbjct: 60 -EWQQVSVRTDSKLVSDSIEKAHVK-------TKAYAGYLCSILDKI 98
>gi|427783065|gb|JAA56984.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 456
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 17 RKQDVAPLIAKTMALETINTRYPSDDWLHIYTDGSLINPEDGAGAGIFCELFSFYKRLGT 76
+K +++ + K ++L ++ +Y D +HIYTDGS I + +
Sbjct: 146 KKSELSSPVLKQLSLRLLHEKY--ADHVHIYTDGSTTIRSSSGAVVIPARGVTVSFKTDH 203
Query: 77 FTTNFDGEIAAIKIALLQILNRTNQFERAVILSDSKAAIHPMNS 120
T++ E+AA++ AL +LNR Q +R I +DSKAA+ + S
Sbjct: 204 PTSSTAAELAALRTALC-VLNR-EQPQRWSIFTDSKAALQSLLS 245
>gi|427783061|gb|JAA56982.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 460
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 17 RKQDVAPLIAKTMALETINTRYPSDDWLHIYTDGSLINPEDGAGAGIFCELFSFYKRLGT 76
+K +++ + K ++L ++ +Y D +HIYTDGS + + +
Sbjct: 146 KKAELSSPVLKQLSLRLMHEKY--TDHVHIYTDGSTTIRSSSGAVVVPARGVTVSFKTDH 203
Query: 77 FTTNFDGEIAAIKIALLQILNRTNQFERAVILSDSKAAIHPMNS 120
T++ E+AA++ AL +LNR Q +R I +DSKAA+ + S
Sbjct: 204 PTSSTAAELAALRTALC-VLNR-EQPQRWSIFTDSKAALQSLLS 245
>gi|427783063|gb|JAA56983.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 460
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 17 RKQDVAPLIAKTMALETINTRYPSDDWLHIYTDGSLINPEDGAGAGIFCELFSFYKRLGT 76
+K +++ + K ++L ++ +Y D +HIYTDGS + + +
Sbjct: 146 KKAELSSPVLKQLSLRLMHEKY--TDHVHIYTDGSTTIRSSSGAVVVPARGVTVSFKTDH 203
Query: 77 FTTNFDGEIAAIKIALLQILNRTNQFERAVILSDSKAAIHPMNS 120
T++ E+AA++ AL +LNR Q +R I +DSKAA+ + S
Sbjct: 204 PTSSTAAELAALRTALC-VLNR-EQPQRWSIFTDSKAALQSLLS 245
>gi|427778517|gb|JAA54710.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 468
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 17 RKQDVAPLIAKTMALETINTRYPSDDW---LHIYTDGSLINPEDGAGAGIFCELFSFYKR 73
RK D+ T AL+ ++ D++ +HIYTDGS + G I + + +
Sbjct: 153 RKSDL-----PTHALKQLSLLLQYDNYSNHVHIYTDGSTTSCSSGGAVVIPSQGITLRFK 207
Query: 74 LGTFTTNFDGEIAAIKIALLQILNRTNQFERAVILSDSKAAIHPMNSVHLNSC 126
TT+ E+AA++ A L+ +N + + + SDSK A+ + SV C
Sbjct: 208 TSHATTSTAAELAALRSA-LEFINSEERPSKWAVFSDSKPALQCLGSVLRRGC 259
>gi|198459368|ref|XP_002136090.1| GA23309 [Drosophila pseudoobscura pseudoobscura]
gi|198140278|gb|EDY71053.1| GA23309 [Drosophila pseudoobscura pseudoobscura]
Length = 216
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 16/100 (16%)
Query: 39 PSDDW----------LHIYTDGSLINPEDG-AGAGIFCELFSFYK--RLGTFTTNFDGEI 85
P +DW +H YTDGS + DG G G++C + RL + F +I
Sbjct: 78 PREDWEMGEPGPANAVHFYTDGSKL---DGRVGGGVYCSELNISHCFRLPDHCSVFQADI 134
Query: 86 AAIKIALLQILNRTNQFERAVILSDSKAAIHPMNSVHLNS 125
AIK A+ + + SDS+AAI + S+ NS
Sbjct: 135 EAIKEAISIVSKLRLDTHLVCVFSDSQAAIKALGSISSNS 174
>gi|427781947|gb|JAA56425.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 17 RKQDVAPLIAKTMALETINTRYPSDDWLHIYTDGSLINPEDGAGAGIFCELFSFYKRLGT 76
+K++++ L K AL+ ++T Y D +H+YTDGS I +L
Sbjct: 141 KKKNLSTLALKQAALDCLHTFYA--DRIHVYTDGSTTQTSSTGATVIPSRHIHLTYKLCH 198
Query: 77 FTTNFDGEIAAIKIALLQILNRTNQFERAVILSDSKAAIHPMNS 120
+T+ E+AA++ A+ I + R + DSKAA+ ++S
Sbjct: 199 VSTSTGSELAALRGAVNHI--KEQPANRWAVFCDSKAALQCLSS 240
>gi|542601|pir||S37765 hypothetical protein - fruit fly (Drosophila miranda) transposon
TRIM
Length = 426
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 44 LHIYTDGSLINPEDG-AGAGIFC-EL-FSFYKRLGTFTTNFDGEIAAIKIALLQILNRTN 100
+H YTDGS + DG G G++C EL S RL + F EI AIK A+ +
Sbjct: 146 VHFYTDGSKL---DGRVGGGVYCSELEISHCFRLPDHCSVFQAEIEAIKEAISIVSKLRL 202
Query: 101 QFERAVILSDSKAAIHPMNSVHLNS 125
+ SDS+AAI + S+ NS
Sbjct: 203 DTHLVCVFSDSQAAIKALGSISSNS 227
>gi|427798325|gb|JAA64614.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 339
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 17 RKQDVAPLIAKTMALETINTRYPSDDWLHIYTDGSLINPEDGAGAGIFCELFSFYKRLGT 76
+K++++ L K AL+ ++T Y D +H+YTDGS I +L
Sbjct: 141 KKKNLSTLALKQAALDCLHTFYA--DRIHVYTDGSTTQTSSTGATVIPSRHIHLTYKLCH 198
Query: 77 FTTNFDGEIAAIKIALLQILNRTNQFERAVILSDSKAAIHPMNS 120
+T+ E+AA++ A+ I + R + DSKAA+ ++S
Sbjct: 199 VSTSTGSELAALRGAVNHI--KEQPANRWAVFCDSKAALQCLSS 240
>gi|1335691|emb|CAA41925.1| unnamed protein product [Drosophila miranda]
Length = 521
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 44 LHIYTDGSLINPEDG-AGAGIFC-EL-FSFYKRLGTFTTNFDGEIAAIKIALLQILNRTN 100
+H YTDGS + DG G G++C EL S RL + F EI AIK A+ +
Sbjct: 241 VHFYTDGSKL---DGRVGGGVYCSELEISHCFRLPDHCSVFQAEIEAIKEAISIVSKLRL 297
Query: 101 QFERAVILSDSKAAIHPMNSVHLNS 125
+ SDS+AAI + S+ NS
Sbjct: 298 DTHLVCVFSDSQAAIKALGSISSNS 322
>gi|427780533|gb|JAA55718.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 380
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 17 RKQDVAPLIAKTMALETINTRYPSDDWLHIYTDGSLINPEDGAGAGIFCELFSFYKRLGT 76
+K++++ L K AL+ ++T Y D +H+YTDGS I +L
Sbjct: 141 KKKNLSTLALKQAALDCLHTFYA--DRIHVYTDGSTTQTSSTGATVIPSRHIHLTYKLCH 198
Query: 77 FTTNFDGEIAAIKIALLQILNRTNQFERAVILSDSKAAIHPMNS 120
+T+ E+AA++ A+ I + R + DSKAA+ ++S
Sbjct: 199 VSTSTGSELAALRGAVNHI--KEQPANRWAVFCDSKAALQCLSS 240
>gi|315282898|ref|ZP_07871203.1| ribonuclease HI [Listeria marthii FSL S4-120]
gi|313613453|gb|EFR87292.1| ribonuclease HI [Listeria marthii FSL S4-120]
Length = 133
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 44 LHIYTDGSLINPEDGAGAGIFCELFSFYKRLG---TFTTNFDGEIAAIKIALLQILNRTN 100
+ ++ DG+ +GAGI + Y++L TN + E AIK+ L + L +
Sbjct: 1 MEVFVDGASAGNPGPSGAGIVLKADGIYEQLAIPLEIMTNHEAEFIAIKLGLEEALKKQA 60
Query: 101 QFERAVILSDSKAAIHPMNSVHLNSC---PALEA 131
F R + SDSK AI ++ H + P LEA
Sbjct: 61 TFIR--LYSDSKVAIEAIHKRHAKNPLFKPHLEA 92
>gi|427779393|gb|JAA55148.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 424
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 17 RKQDVAPLIAKTMALETINTRYPSDDWLHIYTDGSLINPEDGAGAGIFCELFSFYKRLGT 76
+K++++ L K AL+ ++T Y D +H+YTDGS I +L
Sbjct: 141 KKKNLSTLALKQAALDCLHTFY--ADRIHVYTDGSTTQTSSTGATVIPSRHIHLTYKLCH 198
Query: 77 FTTNFDGEIAAIKIALLQILNRTNQFERAVILSDSKAAIHPMNS 120
+T+ E+AA++ A+ I + R + DSKAA+ ++S
Sbjct: 199 VSTSTGSELAALRGAVNHI--KEQPANRWAVFCDSKAALQCLSS 240
>gi|427791527|gb|JAA61215.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1298
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 17 RKQDVAPLIAKTMALETINTRYPSDDWLHIYTDGSLINPEDGAGAGIFCELFSFYKRLGT 76
+K++++ L K AL+ ++T Y D +H+YTDGS I +L
Sbjct: 939 KKKNLSTLALKQAALDCLHTFYA--DRIHVYTDGSTTQTSSTGATVIPSRHIHLTYKLCH 996
Query: 77 FTTNFDGEIAAIKIALLQILNRTNQFERAVILSDSKAAIHPMNS 120
+T+ E+AA++ A+ I + R + DSKAA+ ++S
Sbjct: 997 VSTSTGSELAALRGAVNHI--KEQPANRWAVFCDSKAALQCLSS 1038
>gi|427784659|gb|JAA57781.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 454
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 17 RKQDVAPLIAKTMALETINTRYPSDDWLHIYTDGSLINPEDGAGAGIFCE---LFSFYKR 73
+K ++PL K ++L ++ Y D +H+YTDGS N GA + L F R
Sbjct: 140 KKARMSPLALKQLSLRLLDETY--FDRMHVYTDGS-TNSNSSTGAVVLPSDEVLLQF--R 194
Query: 74 LGTFTTNFDGEIAAIKIALLQILNRTNQFERAVILSDSKAAI 115
TT+ E+AA++ A+ IL + R I DS++A+
Sbjct: 195 YSHITTSTAAELAALQGAVKYILQ--QRPNRWAIFCDSRSAL 234
>gi|427784657|gb|JAA57780.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 454
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 17 RKQDVAPLIAKTMALETINTRYPSDDWLHIYTDGSLINPEDGAGAGIFCE---LFSFYKR 73
+K ++PL K ++L ++ Y D +H+YTDGS N GA + L F R
Sbjct: 140 KKARMSPLALKQLSLRLLDETY--FDRMHVYTDGS-TNSNSSTGAVVLPSDEVLLQF--R 194
Query: 74 LGTFTTNFDGEIAAIKIALLQILNRTNQFERAVILSDSKAAI 115
TT+ E+AA++ A+ IL + R I DS++A+
Sbjct: 195 YSHITTSTAAELAALQGAVKYILQ--QRPNRWAIFCDSRSAL 234
>gi|307153698|ref|YP_003889082.1| phage tail protein [Cyanothece sp. PCC 7822]
gi|306983926|gb|ADN15807.1| phage tail protein [Cyanothece sp. PCC 7822]
Length = 339
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 42 DWLHIYTDGSLINPEDGAGAGIFCELFS-FYKRLGTFTTNFDGEIAAIKI--ALLQILNR 98
DW+ I+ +G I P GI+ ++ + F++ T++ +G+ + A+
Sbjct: 78 DWMRIHAEGPSIFPHQQMWCGIYFDVPADFFEGNATWS---EGKQPPLDYTCAIYIYYGN 134
Query: 99 TNQFERAVILSDSKAAIHPMNSVHLNSCPALEASNDIVGTLCSVLNK 145
Q RA + + KA I P +S++LN PAL D+VG L + +
Sbjct: 135 PEQTARACEIIEFKAYIRP-HSIYLNFLPALYREVDLVGRLLKIFEQ 180
>gi|67537820|ref|XP_662684.1| hypothetical protein AN5080.2 [Aspergillus nidulans FGSC A4]
gi|40740985|gb|EAA60175.1| hypothetical protein AN5080.2 [Aspergillus nidulans FGSC A4]
Length = 804
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 14/104 (13%)
Query: 46 IYTDGSLINPEDGAGAGIFCELF----SFYKRLGTFTTNFDGEIAAIKIALLQILNRTNQ 101
+YTDGS IN GA A C + S Y + +T + E+ I +AL+ IL R Q
Sbjct: 185 LYTDGSGINGRVGAAA--ICPKYLISRSSYMGQQSESTVYVAELQGILLALVIILQR--Q 240
Query: 102 FERAVILSDSKAAIHPMNSVHLNSCPALEASNDIVGTLCSVLNK 145
+ AVI +D++A + + + P ++ I+ + LNK
Sbjct: 241 MQHAVIFTDNQATLQALRN------PGSQSGQYILEAIIMALNK 278
>gi|341899017|gb|EGT54952.1| hypothetical protein CAEBREN_14004 [Caenorhabditis brenneri]
Length = 172
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 44 LHIYTDG-SLINPEDGAGAG--IFCELFSFYKRLG----TFTTNFDGEIAAIKIALLQIL 96
LHIYTDG +L N + GA G I E +F G + TN E+ AIK ALLQ L
Sbjct: 10 LHIYTDGCALRNGQPGAKGGWAIVYEFGNFKNDKGHSDIGYQTNNRYELEAIKQALLQSL 69
Query: 97 NRTNQFERAVILSDSKAAIHPM 118
+++ I +DS AI+ +
Sbjct: 70 KSGGKYD-VTIFTDSMYAINSI 90
>gi|427779397|gb|JAA55150.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 425
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 44 LHIYTDGSLINPEDGAGAGIFCELFSFYKRLGTFTTNFDGEIAAIKIALLQILNRTNQFE 103
+H+YTDGS++ A I + + + TT+ E+AA+++AL I + Q
Sbjct: 171 MHVYTDGSVMPNSSTAAVVIPMKATTIKFKTSHLTTSTAAELAALRVALDFITDERAQ-- 228
Query: 104 RAVILSDSKAAIHPMNS 120
+ I SDSKAA+ + S
Sbjct: 229 KWAIFSDSKAALQSLLS 245
>gi|427779423|gb|JAA55163.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 435
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 44 LHIYTDGSLINPEDGAGAGIFCELFSFYKRLGTFTTNFDGEIAAIKIALLQILNRTNQFE 103
+H+YTDGS++ A I + + + TT+ E+AA+++AL I + Q
Sbjct: 171 MHVYTDGSVMPNSSTAAVVIPMKATTIKFKTSHLTTSTAAELAALRVALDFITDERAQ-- 228
Query: 104 RAVILSDSKAAIHPMNS 120
+ I SDSKAA+ + S
Sbjct: 229 KWAIFSDSKAALQSLLS 245
>gi|2290213|gb|AAB65093.1| Lian-Aa1 retrotransposon protein [Aedes aegypti]
Length = 1189
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 19/117 (16%)
Query: 25 IAKTMALETINTRYPS-DDW------------LHIYTDGSLINPEDGAGAGIFCE---LF 68
IA + T T++PS ++W + YTDGSL+ E AGAG++ L
Sbjct: 881 IACNLPYRTFTTQFPSREEWTSGYLERSISNNIVCYTDGSLL--EGRAGAGVYSRELRLN 938
Query: 69 SFYKRLGTFTTNFDGEIAAIKIALLQILNRTNQFERAVILSDSKAAIHPMNSVHLNS 125
FY LG T F EI A+ + L + + SDS+AAI + S + S
Sbjct: 939 QFYS-LGRNCTVFQAEIFALMCGVQSALQQRVMGKVIYFCSDSQAAIKALASANSRS 994
>gi|259482037|tpe|CBF76131.1| TPA: hypothetical protein ANIA_10625 [Aspergillus nidulans FGSC A4]
Length = 486
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 46 IYTDGSLINPEDGAGAGIFCELFSFYKRLG--TFTTNFDGEIAAIKIALLQILNRTNQFE 103
+YTDGS IN GA A L S +G + +T + E+ I +AL+ IL R Q +
Sbjct: 185 LYTDGSGINGRVGAAAICPKYLISRSSYMGQQSESTVYVAELQGILLALVIILQR--QMQ 242
Query: 104 RAVILSDSKAAIHPMNSVHLNSCPALEASNDIVGTLCSVLNK 145
AVI +D++A + + + P ++ I+ + LNK
Sbjct: 243 HAVIFTDNQATLQALRN------PGSQSGQYILEAIIMALNK 278
>gi|427782519|gb|JAA56711.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 460
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 44 LHIYTDGSLINPEDGAGAGIFCELFSFYKRLGTFTTNFDGEIAAIKIALLQILNRTNQFE 103
+H+YTDGS++ A I + + + TT+ E+AA+++AL I + Q
Sbjct: 171 MHVYTDGSVMPNSSTAAVVIPMKATTIKFKTSHLTTSTAAELAALRVALDFITDERAQ-- 228
Query: 104 RAVILSDSKAAIHPMNS 120
+ I SDSKAA+ + S
Sbjct: 229 KWAIFSDSKAALQSLLS 245
>gi|268530932|ref|XP_002630592.1| C. briggsae CBR-RNH-1.1 protein [Caenorhabditis briggsae]
Length = 482
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 35 NTRYPSDDWLHIYTDGSLINPEDGAGAGIFC----ELFSFYKRLGTFTTNFDGEIAAIKI 90
N +P L +YTDGS + E +G GIF EL + G N E A+K
Sbjct: 295 NETFPKGS-LIMYTDGSYLKREHRSGIGIFVAPGHELNRSQRIHGNIQDNNFAEFLAVKT 353
Query: 91 ALLQIL-NRTNQFERAVILSDSKAAIHPMNSVHLNSCPALEA 131
AL L N T + ++ VI +D I ++ V S P L++
Sbjct: 354 ALQNALKNETYRNQKIVIRTDCLNVIEALSGVRGTSYPGLKS 395
>gi|387906911|ref|YP_006337246.1| ribonuclease HI [Blattabacterium sp. (Blaberus giganteus)]
gi|387581803|gb|AFJ90581.1| ribonuclease HI [Blattabacterium sp. (Blaberus giganteus)]
Length = 168
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 44 LHIYTDGSLINPEDGAGAGIFCELF--SFYKRL-----GTFTTNFDGEIAAIKIALLQIL 96
+HIYTDGS G G+F E+F FY R +TTN E+ ++ + L +I
Sbjct: 12 IHIYTDGSSKGNPGPGGYGVFIEIFFGRFYNRKIISEGFRYTTNNRMELLSVIVGLEKIE 71
Query: 97 NRTNQFERAVILSDSKAAIHPMNS 120
N+ + ++ +DSK ++ + +
Sbjct: 72 NKK---QNIIVFTDSKYIVNTVQN 92
>gi|427798001|gb|JAA64452.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1259
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 9 SLFLEETFRKQDVAPLIAKTMALETINTRYPSDDWLHIYTDGSLINPEDGAGAGIFCELF 68
SL + +K D++ K +AL + +Y +H+YTDGS++ A I +
Sbjct: 940 SLAIPGIRKKADMSSPALKQLALLMLYEKY--QGCIHVYTDGSVLQNSSTASVVIPIKAT 997
Query: 69 SFYKRLGTFTTNFDGEIAAIKIALLQILNRTNQFERAVILSDSKAAIHPMNS 120
+ + TT+ E+ A++ AL I + Q + I SDSKAA+ + S
Sbjct: 998 TIKCKTCHLTTSTGAELTALRAALQFISDERAQ--KWTIFSDSKAALQSLLS 1047
>gi|427798837|gb|JAA64870.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1174
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 9 SLFLEETFRKQDVAPLIAKTMALETINTRYPSDDWLHIYTDGSLINPEDGAGAGIFCELF 68
SL + +K D++ K +AL + +Y +H+YTDGS++ A I +
Sbjct: 901 SLAIPGIRKKADMSSPALKQLALLMLYEKY--QGCIHVYTDGSVLQNSSTASVVIPIKAT 958
Query: 69 SFYKRLGTFTTNFDGEIAAIKIALLQILNRTNQFERAVILSDSKAAIHPMNS 120
+ + TT+ E+ A++ AL I + Q + I SDSKAA+ + S
Sbjct: 959 TIKCKTCHLTTSTGAELTALRAALQFISDERAQ--KWTIFSDSKAALQSLLS 1008
>gi|342867783|gb|EGU72563.1| hypothetical protein FOXB_16927 [Fusarium oxysporum Fo5176]
Length = 1790
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 42 DWLHIYTDGSLINPEDGAGAGIFC----ELFSFYKRLGTFTTNFDGEIAAIKIAL---LQ 94
D +HIYTDGS IN G+ A C + S Y T +T + GE+ + +AL Q
Sbjct: 1486 DAIHIYTDGSRINGHVGSAA--VCTTTNQAKSAYMGEDTVSTVYAGELQGVSLALQIAQQ 1543
Query: 95 ILNRTNQFERAVILSDSKAAI 115
++ N + +I +D++AAI
Sbjct: 1544 DRDQGNVRTKVMIYTDNQAAI 1564
>gi|427798201|gb|JAA64552.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1128
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 9 SLFLEETFRKQDVAPLIAKTMALETINTRYPSDDWLHIYTDGSLINPEDGAGAGIFCELF 68
SL + +K D++ K +AL + +Y +H+YTDGS++ A I +
Sbjct: 901 SLAIPGIRKKADMSSPALKQLALLMLYEKY--QGCIHVYTDGSVLQNSSTASVVIPIKAT 958
Query: 69 SFYKRLGTFTTNFDGEIAAIKIALLQILNRTNQFERAVILSDSKAAIHPMNS 120
+ + TT+ E+ A++ AL I + Q + I SDSKAA+ + S
Sbjct: 959 TIKCKTCHLTTSTGAELTALRAALQFISDERAQ--KWTIFSDSKAALQSLLS 1008
>gi|427798839|gb|JAA64871.1| Putative tick transposon, partial [Rhipicephalus pulchellus]
Length = 1220
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 44 LHIYTDGSLINPEDGAGAGIFCELFSFYKRLGTFTTNFDGEIAAIKIALLQILNRTNQFE 103
+H+YTDGS++ A I + + + TT+ E+AA+++AL I + Q
Sbjct: 934 MHVYTDGSVMPNSSTAAVVIPMKATTIKFKTSHLTTSTAAELAALRVALDFITDERAQ-- 991
Query: 104 RAVILSDSKAAIHPMNS 120
+ I SDSKAA+ + S
Sbjct: 992 KWAIFSDSKAALQSLLS 1008
>gi|347549277|ref|YP_004855605.1| putative RNase HI [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346982348|emb|CBW86342.1| Putative similar to RNase HI [Listeria ivanovii subsp. ivanovii PAM
55]
Length = 132
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 44 LHIYTDGSLINPEDGAGAGIFCELFSFYKRLG---TFTTNFDGEIAAIKIALLQILNRTN 100
+ ++ DG+ +GAGI + Y++L TN + E AIK+ L L +
Sbjct: 1 MEVFVDGASAGNPGPSGAGIVLKADGIYEQLAIPLAVMTNHEAEFIAIKLGLEAALKKQA 60
Query: 101 QFERAVILSDSKAAIHPMNSVH 122
F R + SDSK AI + H
Sbjct: 61 TFIR--LYSDSKVAIEAIQKRH 80
>gi|427782051|gb|JAA56477.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 44 LHIYTDGSLINPEDGAGAGIFCELFSFYKRLGTFTTNFDGEIAAIKIALLQILNRTNQFE 103
+HIYTDGS G I + + TT+ E+ A++ AL I + +
Sbjct: 166 VHIYTDGSTTVSSSGGAVVIPAREITLRLKTSHVTTSTAAELTALRCALEYI--DSERPS 223
Query: 104 RAVILSDSKAAIHPMNSVHLNSC 126
R + SDSK A+ + SV C
Sbjct: 224 RWAVFSDSKPALQCVRSVLRRGC 246
>gi|90409437|ref|ZP_01217503.1| hypothetical protein PCNPT3_00010, partial [Psychromonas sp. CNPT3]
gi|90309457|gb|EAS37676.1| hypothetical protein PCNPT3_00010 [Psychromonas sp. CNPT3]
Length = 776
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 45 HIYTDGSLINPEDGAGAGIFCELFSFYKRLGTFTTNFDGEIAAIKIALLQILNRTNQFER 104
YTDGS + E+G G G+F E + +L T F E+AAI ALL I + ++
Sbjct: 632 QFYTDGS--SSEEGTGFGVFSETTGAFFKLRQPCTVFTAELAAIFYALLLI--AASPPDQ 687
Query: 105 AVILSDSKAAIHPMNS 120
I +DS +AI + +
Sbjct: 688 YFIFTDSLSAIEALKT 703
>gi|427784665|gb|JAA57784.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 17 RKQDVAPLIAKTMALETINTRYPSDDWLHIYTDGSLINPEDGAGAGIFCEL-FSFYKRLG 75
+K ++PL K +L IN Y D +H+YTDGS N GA + S +
Sbjct: 141 KKARLSPLALKQFSLCLINETY--FDRVHVYTDGS-TNSNSSTGAVVVPSGDISMQLKFS 197
Query: 76 TFTTNFDGEIAAIKIALLQILNR-TNQFERAVILSDSKAAIHPMN 119
TT+ E+ A++ A+ IL + NQ+ I DS++A+ +
Sbjct: 198 HITTSTAAELGALQAAVKYILRQPPNQW---AIFCDSRSALQTLQ 239
>gi|427779469|gb|JAA55186.1| Putative tick transposon [Rhipicephalus pulchellus]
gi|427782053|gb|JAA56478.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 455
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 44 LHIYTDGSLINPEDGAGAGIFCELFSFYKRLGTFTTNFDGEIAAIKIALLQILNRTNQFE 103
+HIYTDGS G I + + TT+ E+ A++ AL I + +
Sbjct: 166 VHIYTDGSTTVSSSGGAVVIPAREITLRLKTSHVTTSTAAELTALRCALEYI--DSERPS 223
Query: 104 RAVILSDSKAAIHPMNSVHLNSC 126
R + SDSK A+ + SV C
Sbjct: 224 RWAVFSDSKPALQCVRSVLRRGC 246
>gi|374290535|ref|YP_005037588.1| ribonuclease HI [Blattabacterium sp. (Cryptocercus punctulatus)
str. Cpu]
gi|358377327|gb|AEU09515.1| ribonuclease HI [Blattabacterium sp. (Cryptocercus punctulatus)
str. Cpu]
Length = 160
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 44 LHIYTDGSLINPEDGAGAGIFCEL--FSFYKRLG---TFTTNFDGEIAAIKIALLQILNR 98
+HIYTDGS G IF E+ S++K + +TTN E+ AI + L +I
Sbjct: 5 IHIYTDGSSKGNPGPGGYAIFIEIAGTSYWKIISEGFRYTTNNRMELLAIIVGLEKI--- 61
Query: 99 TNQFERAVILSDSKAAIHPMNSVHLN 124
T + + +I +DSK I NS+ N
Sbjct: 62 TKKKQNIIIFTDSKYII---NSIQKN 84
>gi|331242530|ref|XP_003333911.1| hypothetical protein PGTG_15334 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 475
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 18/107 (16%)
Query: 26 AKTMALETINTRYPS---DDWLHIYTDGSLINPEDGAGA------GIFCELFSFYKRLGT 76
+K+ A ET++ S D L ++TDGS +P++G GA G+ ++ +F LG
Sbjct: 258 SKSAAKETVSCYLESVDHTDTLLVFTDGS-AHPKEGLGAAAVTADGLSVQM-AF---LGP 312
Query: 77 --FTTNFDGEIAAIKIALL--QILNRTNQFERAVILSDSKAAIHPMN 119
+NF+ E+ I++ L ++L F + V+L+DS+AAI M
Sbjct: 313 PEIASNFECELVGIRLGLEMGRVLTTEAGFRQIVLLTDSQAAIERMR 359
>gi|310820211|ref|YP_003952569.1| Excinuclease ABC subunit A family protein [Stigmatella aurantiaca
DW4/3-1]
gi|309393283|gb|ADO70742.1| Excinuclease ABC, A subunit family protein [Stigmatella aurantiaca
DW4/3-1]
Length = 1766
Score = 35.8 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 49 DGSLINPEDGAGAGIFCELFSFYKRLGTFTTNFDGEIAAIKIALLQILNRTNQFERAVIL 108
DG++++P A GI+ +LF+ R G T DGE+AA L +T + + ++L
Sbjct: 1076 DGTVLSPAVRARKGIYLDLFNAASRAGILTAIVDGEVAATDSP--PRLAKTREHDIDLVL 1133
Query: 109 SDSKAAIHP 117
+ K A P
Sbjct: 1134 YEGKLAKLP 1142
>gi|115375273|ref|ZP_01462538.1| excinuclease ABC, A subunit, putative [Stigmatella aurantiaca
DW4/3-1]
gi|115367740|gb|EAU66710.1| excinuclease ABC, A subunit, putative [Stigmatella aurantiaca
DW4/3-1]
Length = 1821
Score = 35.8 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 49 DGSLINPEDGAGAGIFCELFSFYKRLGTFTTNFDGEIAAIKIALLQILNRTNQFERAVIL 108
DG++++P A GI+ +LF+ R G T DGE+AA L +T + + ++L
Sbjct: 1131 DGTVLSPAVRARKGIYLDLFNAASRAGILTAIVDGEVAATDSP--PRLAKTREHDIDLVL 1188
Query: 109 SDSKAAIHP 117
+ K A P
Sbjct: 1189 YEGKLAKLP 1197
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,292,539,797
Number of Sequences: 23463169
Number of extensions: 87894052
Number of successful extensions: 180247
Number of sequences better than 100.0: 61
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 180238
Number of HSP's gapped (non-prelim): 61
length of query: 160
length of database: 8,064,228,071
effective HSP length: 122
effective length of query: 38
effective length of database: 9,496,688,749
effective search space: 360874172462
effective search space used: 360874172462
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)