Your job contains 1 sequence.
>psy7634
MALSLVNSFKNLLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVE
KGSILYISYVQRLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSGQ
EGLPIYKKHIHVLPEEQHSRFRLVDEPRVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQ
EGEVVEKGSILYISYVQRLDYHPGLN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7634
(206 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0053002 - symbol:mRpL27 "mitochondrial ribosomal p... 349 7.7e-32 1
MGI|MGI:2137224 - symbol:Mrpl27 "mitochondrial ribosomal ... 190 5.4e-15 1
RGD|1309090 - symbol:Mrpl27 "mitochondrial ribosomal prot... 189 6.9e-15 1
ZFIN|ZDB-GENE-050522-129 - symbol:mrpl27 "mitochondrial r... 181 4.9e-14 1
UNIPROTKB|Q32PC3 - symbol:MRPL27 "39S ribosomal protein L... 180 6.2e-14 1
UNIPROTKB|F1RT79 - symbol:LOC100737651 "Uncharacterized p... 179 7.9e-14 1
UNIPROTKB|E2QYN6 - symbol:MRPL27 "Uncharacterized protein... 177 1.3e-13 1
UNIPROTKB|Q9P0M9 - symbol:MRPL27 "39S ribosomal protein L... 174 2.7e-13 1
UNIPROTKB|H7C5U8 - symbol:MRPL27 "39S ribosomal protein L... 149 1.2e-10 1
UNIPROTKB|F1NU81 - symbol:MRPL27 "Uncharacterized protein... 143 5.2e-10 1
TAIR|locus:2150881 - symbol:AT5G15220 species:3702 "Arabi... 117 4.2e-07 1
WB|WBGene00185067 - symbol:Y54G11A.17 species:6239 "Caeno... 115 7.2e-07 1
TAIR|locus:2039390 - symbol:AT2G16930 species:3702 "Arabi... 114 9.4e-07 1
UNIPROTKB|D6RAN8 - symbol:MRPL27 "39S ribosomal protein L... 113 1.2e-06 1
UNIPROTKB|B3KN43 - symbol:MRPL27 "Mitochondrial ribosomal... 107 6.1e-06 1
TIGR_CMR|SO_3651 - symbol:SO_3651 "ribosomal protein L27"... 105 1.0e-05 1
UNIPROTKB|Q9KUS9 - symbol:rpmA "50S ribosomal protein L27... 104 1.4e-05 1
TIGR_CMR|VC_0436 - symbol:VC_0436 "ribosomal protein L27"... 104 1.4e-05 1
UNIPROTKB|P0A7L8 - symbol:rpmA "50S ribosomal subunit pro... 100 3.9e-05 1
UNIPROTKB|P66127 - symbol:rpmA "50S ribosomal protein L27... 100 3.9e-05 1
UNIPROTKB|D6RE11 - symbol:MRPL27 "39S ribosomal protein L... 97 8.6e-05 1
TIGR_CMR|NSE_0897 - symbol:NSE_0897 "ribosomal protein L2... 97 8.6e-05 1
TIGR_CMR|GSU_3235 - symbol:GSU_3235 "ribosomal protein L2... 96 0.00011 1
TIGR_CMR|CBU_0386 - symbol:CBU_0386 "ribosomal protein L2... 95 0.00015 1
TIGR_CMR|CPS_4511 - symbol:CPS_4511 "ribosomal protein L2... 91 0.00041 1
TIGR_CMR|BA_4674 - symbol:BA_4674 "ribosomal protein L27"... 90 0.00054 1
>FB|FBgn0053002 [details] [associations]
symbol:mRpL27 "mitochondrial ribosomal protein L27"
species:7227 "Drosophila melanogaster" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005762 "mitochondrial
large ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 EMBL:AE014134 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR15893 SUPFAM:SSF110324
GeneTree:ENSGT00390000014660 CTD:51264 RefSeq:NP_787971.1
ProteinModelPortal:Q86BM8 SMR:Q86BM8 IntAct:Q86BM8 MINT:MINT-800309
STRING:Q86BM8 PRIDE:Q86BM8 EnsemblMetazoa:FBtr0077451 GeneID:318825
KEGG:dme:Dmel_CG33002 UCSC:CG33002-RA FlyBase:FBgn0053002
InParanoid:Q86BM8 OMA:FAMEHGR OrthoDB:EOG47H46D PhylomeDB:Q86BM8
GenomeRNAi:318825 NextBio:846234 ArrayExpress:Q86BM8 Bgee:Q86BM8
Uniprot:Q86BM8
Length = 138
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 73/136 (53%), Positives = 90/136 (66%)
Query: 13 LTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPK--GFRKQEGEVVEKGSILYISYV 70
L QP+ +VRNA+KKTG STRNK G PK G+R Q+G V +G+IL
Sbjct: 9 LKADQPLMTTVRNASKKTGGSTRNK-----KGHARPKHRGWRVQDGHHVSEGTILATQLT 63
Query: 71 QRLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSGQEGLPIYKKHI 130
R +HPGLNVGFG GTLFAME GKV +T E + NW HTW+ NY+G++G IYKK
Sbjct: 64 TR--FHPGLNVGFGRNGTLFAMEHGKVYVTCEAIDPNWDHTWIQRNYAGRQGQNIYKKFF 121
Query: 131 HVLPEEQHSRFRLVDE 146
+V+PE QH RFRLV+E
Sbjct: 122 NVVPENQHQRFRLVEE 137
Score = 113 (44.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 32/67 (47%), Positives = 39/67 (58%)
Query: 145 DEP---RVRNAAKKTGTSTRNKPIRKNSGFRFPK--GFRKQEGEVVEKGSILYISYVQRL 199
D+P VRNA+KKTG STRNK G PK G+R Q+G V +G+IL R
Sbjct: 12 DQPLMTTVRNASKKTGGSTRNK-----KGHARPKHRGWRVQDGHHVSEGTILATQLTTR- 65
Query: 200 DYHPGLN 206
+HPGLN
Sbjct: 66 -FHPGLN 71
>MGI|MGI:2137224 [details] [associations]
symbol:Mrpl27 "mitochondrial ribosomal protein L27"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISO] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114
PROSITE:PS00831 MGI:MGI:2137224 GO:GO:0005739 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 eggNOG:COG0211 HOGENOM:HOG000111610
PANTHER:PTHR15893 SUPFAM:SSF110324 GeneTree:ENSGT00390000014660
CTD:51264 HOVERGEN:HBG018255 OMA:HVVPAKP OrthoDB:EOG4J9N1F
EMBL:AB049648 EMBL:BC030074 IPI:IPI00118227 RefSeq:NP_444391.1
UniGene:Mm.34951 ProteinModelPortal:Q99N92 SMR:Q99N92 STRING:Q99N92
PhosphoSite:Q99N92 PaxDb:Q99N92 PRIDE:Q99N92
Ensembl:ENSMUST00000025278 GeneID:94064 KEGG:mmu:94064
InParanoid:Q99N92 NextBio:352041 Bgee:Q99N92 CleanEx:MM_MRPL27
Genevestigator:Q99N92 GermOnline:ENSMUSG00000024414
GermOnline:ENSMUSG00000071867 Uniprot:Q99N92
Length = 148
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 47/135 (34%), Positives = 77/135 (57%)
Query: 12 LLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQ 71
LL+ + P ++VR+A+KKTG S++N K+ G + G +K EG V G+IL +
Sbjct: 17 LLSPTAPTALAVRHASKKTGGSSKNLG-GKSRGKHY--GIKKMEGHYVHAGNILGTQ--R 71
Query: 72 RLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG-QEGLPIYKKHI 130
+ +HPG +VG G L+A+E+G V+ T + N K+T + + +G +YK +
Sbjct: 72 QFRWHPGAHVGLGRNKCLYALEEGIVRYTKDVYVPNPKNTEAVDLVTSLPKGAVLYKTFV 131
Query: 131 HVLPEEQHSRFRLVD 145
HV+P + F+LVD
Sbjct: 132 HVVPAKPEGTFKLVD 146
>RGD|1309090 [details] [associations]
symbol:Mrpl27 "mitochondrial ribosomal protein L27"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR001684 Pfam:PF01016
PRINTS:PR00063 ProDom:PD003114 RGD:1309090 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR15893
SUPFAM:SSF110324 GeneTree:ENSGT00390000014660 OrthoDB:EOG4J9N1F
IPI:IPI00369982 Ensembl:ENSRNOT00000004947 UCSC:RGD:1309090
Uniprot:D3ZTW8
Length = 150
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 47/135 (34%), Positives = 77/135 (57%)
Query: 12 LLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQ 71
LL+ + P ++VR+A+KKTG S++N K+ G + G +K EG V G+IL +
Sbjct: 19 LLSPTAPTALAVRSASKKTGGSSKNLG-GKSRGKHY--GIKKMEGHYVHAGNILGTQ--R 73
Query: 72 RLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG-QEGLPIYKKHI 130
+ +HPG +VG G L+A+E+G V+ T E N K++ + + +G +YK +
Sbjct: 74 QFRWHPGAHVGLGKNKCLYALEEGIVRYTKEVYVPNPKNSEAVNLVTSLPKGAVLYKTFV 133
Query: 131 HVLPEEQHSRFRLVD 145
HV+P + F+LVD
Sbjct: 134 HVVPAKPEGTFKLVD 148
>ZFIN|ZDB-GENE-050522-129 [details] [associations]
symbol:mrpl27 "mitochondrial ribosomal protein L27"
species:7955 "Danio rerio" [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 ZFIN:ZDB-GENE-050522-129 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 HOGENOM:HOG000111610 PANTHER:PTHR15893
SUPFAM:SSF110324 CTD:51264 HOVERGEN:HBG018255 OrthoDB:EOG4J9N1F
eggNOG:NOG290823 EMBL:BC095759 IPI:IPI00493060
RefSeq:NP_001018516.1 UniGene:Dr.85554 ProteinModelPortal:Q502C4
STRING:Q502C4 GeneID:553709 KEGG:dre:553709 InParanoid:Q502C4
NextBio:20880439 ArrayExpress:Q502C4 Uniprot:Q502C4
Length = 148
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 50/146 (34%), Positives = 80/146 (54%)
Query: 1 MALSLVNSFKNLLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVE 60
M+L L+ S +L + P + R A+KK+G S++N K+SG R+ G++KQ+G V
Sbjct: 5 MSL-LLRSKSCILFSETPTVVLARFASKKSGGSSKNLG-GKSSGRRY--GYKKQDGNFVH 60
Query: 61 KGSILYISYVQRLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG- 119
G+IL + +HPG +VG G TL+A+E G V+ T E + N
Sbjct: 61 AGNILATQRKGLMRWHPGAHVGIGTNKTLYALEDGIVRYTKEVYVPLPRSAEARENIPQL 120
Query: 120 QEGLPIYKKHIHVLPEEQHSRFRLVD 145
+G +YK ++V+P +Q ++F LVD
Sbjct: 121 PKGAVLYKTFVNVVPTKQENKFTLVD 146
>UNIPROTKB|Q32PC3 [details] [associations]
symbol:MRPL27 "39S ribosomal protein L27, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 eggNOG:COG0211 HOGENOM:HOG000111610 PANTHER:PTHR15893
SUPFAM:SSF110324 PDB:2FTC PDBsum:2FTC GeneTree:ENSGT00390000014660
EMBL:BC108174 IPI:IPI00685896 RefSeq:NP_001032530.1 UniGene:Bt.3038
ProteinModelPortal:Q32PC3 STRING:Q32PC3 Ensembl:ENSBTAT00000028954
GeneID:510058 KEGG:bta:510058 CTD:51264 HOVERGEN:HBG018255
InParanoid:Q32PC3 OMA:HVVPAKP OrthoDB:EOG4J9N1F
EvolutionaryTrace:Q32PC3 NextBio:20869255 Uniprot:Q32PC3
Length = 148
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 48/134 (35%), Positives = 73/134 (54%)
Query: 12 LLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQ 71
LL+ Q ++VR A+KKTG S++N K+ G RF G RK EG V G+IL +
Sbjct: 17 LLSPPQAAALAVRYASKKTGGSSKNLG-GKSPGKRF--GIRKMEGHYVHAGNILATQ--R 71
Query: 72 RLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG-QEGLPIYKKHI 130
+HPG +VG G L+A+E+G V+ T E + ++ + + EG +YK +
Sbjct: 72 HFRWHPGAHVGLGKNKCLYALEEGVVRYTKEVYVPSPSNSEAVDLVTRLPEGAVLYKTFV 131
Query: 131 HVLPEEQHSRFRLV 144
HV+P + F+LV
Sbjct: 132 HVVPAKPEGTFKLV 145
>UNIPROTKB|F1RT79 [details] [associations]
symbol:LOC100737651 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001684 Pfam:PF01016
PRINTS:PR00063 ProDom:PD003114 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR15893 SUPFAM:SSF110324
GeneTree:ENSGT00390000014660 OMA:HVVPAKP EMBL:FP102382
EMBL:FP565647 RefSeq:XP_003131628.3 RefSeq:XP_003483058.1
Ensembl:ENSSSCT00000024316 Ensembl:ENSSSCT00000031817
GeneID:100514487 GeneID:100737651 KEGG:ssc:100514487
KEGG:ssc:100737651 Uniprot:F1RT79
Length = 148
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 47/134 (35%), Positives = 73/134 (54%)
Query: 12 LLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQ 71
LL+ Q ++VR A+KKTG S++N K+ G RF G +K EG V G+IL +
Sbjct: 17 LLSPPQAAALAVRYASKKTGGSSKNLG-GKSPGKRF--GIKKMEGHYVHAGNILATQ--R 71
Query: 72 RLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG-QEGLPIYKKHI 130
+HPG +VG G L+A+E+G V+ T E N ++ + + +G +YK +
Sbjct: 72 HFRWHPGAHVGLGKNKCLYALEEGVVRYTKEVYVPNPSNSEAVDLVTRLPQGAVLYKTFV 131
Query: 131 HVLPEEQHSRFRLV 144
HV+P + F+LV
Sbjct: 132 HVVPAKPEGTFKLV 145
>UNIPROTKB|E2QYN6 [details] [associations]
symbol:MRPL27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR15893 SUPFAM:SSF110324
GeneTree:ENSGT00390000014660 OMA:HVVPAKP EMBL:AAEX03006536
Ensembl:ENSCAFT00000026969 Uniprot:E2QYN6
Length = 149
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 48/134 (35%), Positives = 73/134 (54%)
Query: 12 LLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQ 71
LL+ Q ++VR A+KKTG S++N K+ G RF G RK EG V G+IL +
Sbjct: 18 LLSPPQAASLAVRYASKKTGGSSKNLG-GKSPGKRF--GLRKMEGHYVHAGNILATQ--R 72
Query: 72 RLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG-QEGLPIYKKHI 130
+HPG +VG G + L+A+E+G V T E + +T + + +G +YK +
Sbjct: 73 HFRWHPGAHVGLGKKKHLYALEEGVVHYTKEVYVPSPSNTEAVELVTRLPKGAVLYKTFV 132
Query: 131 HVLPEEQHSRFRLV 144
HV+P + F+LV
Sbjct: 133 HVVPVKPEGTFKLV 146
>UNIPROTKB|Q9P0M9 [details] [associations]
symbol:MRPL27 "39S ribosomal protein L27, mitochondrial"
species:9606 "Homo sapiens" [GO:0005762 "mitochondrial large
ribosomal subunit" evidence=NAS] [GO:0006412 "translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=NAS] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 GO:GO:0006412 GO:GO:0005762
GO:GO:0003735 EMBL:CH471109 HOGENOM:HOG000111610 PANTHER:PTHR15893
SUPFAM:SSF110324 CTD:51264 HOVERGEN:HBG018255 OMA:HVVPAKP
EMBL:AB049647 EMBL:AF151084 EMBL:AK315758 EMBL:BC001066
EMBL:BC021986 IPI:IPI00009444 RefSeq:NP_057588.1 UniGene:Hs.7736
ProteinModelPortal:Q9P0M9 SMR:Q9P0M9 IntAct:Q9P0M9 STRING:Q9P0M9
PhosphoSite:Q9P0M9 DMDM:20139806 PaxDb:Q9P0M9 PRIDE:Q9P0M9
Ensembl:ENST00000225969 GeneID:51264 KEGG:hsa:51264 UCSC:uc002iqq.3
GeneCards:GC17M048445 HGNC:HGNC:14483 HPA:HPA021416 MIM:611837
neXtProt:NX_Q9P0M9 PharmGKB:PA30957 eggNOG:NOG290823
PhylomeDB:Q9P0M9 ChiTaRS:MRPL27 GenomeRNAi:51264 NextBio:54441
ArrayExpress:Q9P0M9 Bgee:Q9P0M9 CleanEx:HS_MRPL27
Genevestigator:Q9P0M9 GermOnline:ENSG00000108826 Uniprot:Q9P0M9
Length = 148
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 47/145 (32%), Positives = 81/145 (55%)
Query: 1 MALSLVNSFKNLLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVE 60
+AL + +LL+ + ++VR A+KK+G S++N K+SG R +G +K EG V
Sbjct: 6 LALRTRTAVTSLLSPTPATALAVRYASKKSGGSSKNLG-GKSSGRR--QGIKKMEGHYVH 62
Query: 61 KGSILYISYVQRLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG- 119
G+I I+ + +HPG +VG G L+A+E+G V+ T E + ++T + +
Sbjct: 63 AGNI--IATQRHFRWHPGAHVGVGKNKCLYALEEGIVRYTKEVYVPHPRNTEAVDLITRL 120
Query: 120 QEGLPIYKKHIHVLPEEQHSRFRLV 144
+G +YK +HV+P + F+LV
Sbjct: 121 PKGAVLYKTFVHVVPAKPEGTFKLV 145
>UNIPROTKB|H7C5U8 [details] [associations]
symbol:MRPL27 "39S ribosomal protein L27, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001684
Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR15893 SUPFAM:SSF110324
HGNC:HGNC:14483 ChiTaRS:MRPL27 EMBL:AC015909 EMBL:AC004707
Ensembl:ENST00000508200 Uniprot:H7C5U8
Length = 136
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 44/130 (33%), Positives = 72/130 (55%)
Query: 21 MSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPG-- 78
++VR A+KK+G S++N K+SG R +G +K EG V G+I I+ + +HPG
Sbjct: 9 LAVRYASKKSGGSSKNLG-GKSSGRR--QGIKKMEGHYVHAGNI--IATQRHFRWHPGAH 63
Query: 79 ---LNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG-QEGLPIYKKHIHVLP 134
L VG G L+A+E+G V+ T E + ++T + + +G +YK +HV+P
Sbjct: 64 VCVLQVGVGKNKCLYALEEGIVRYTKEVYVPHPRNTEAVDLITRLPKGAVLYKTFVHVVP 123
Query: 135 EEQHSRFRLV 144
+ F+LV
Sbjct: 124 AKPEGTFKLV 133
>UNIPROTKB|F1NU81 [details] [associations]
symbol:MRPL27 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR15893 SUPFAM:SSF110324
GeneTree:ENSGT00390000014660 OMA:HVVPAKP EMBL:AADN02053625
IPI:IPI00594545 Ensembl:ENSGALT00000012452 Uniprot:F1NU81
Length = 146
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 49/137 (35%), Positives = 73/137 (53%)
Query: 12 LLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQ 71
+L+ Q +VR A+KK+G S++N R + G R+ G +K EG V G+IL Q
Sbjct: 15 VLSVPQTSLAAVRCASKKSGGSSKNLGGR-SPGKRY--GAKKVEGAYVHAGNILA---TQ 68
Query: 72 RL-DYHPGLNVGFGARGTLFAMEKGKVKITVEKC---NLNWKHTWVIANYSGQEGLPIYK 127
RL +HPG +VG G TL+A+E G V+ T E + + VI + +G +YK
Sbjct: 69 RLIRWHPGAHVGMGRNKTLYALEDGIVRYTKEVYVPPPRSSESREVICSLP--KGAILYK 126
Query: 128 KHIHVLPEEQHSRFRLV 144
I V+P + F+LV
Sbjct: 127 TFISVIPTTEVGSFKLV 143
>TAIR|locus:2150881 [details] [associations]
symbol:AT5G15220 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR001684
InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114
PROSITE:PS00831 HAMAP:MF_00539 EMBL:CP002688 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 eggNOG:COG0211 ProtClustDB:CLSN2686202
PANTHER:PTHR15893 SUPFAM:SSF110324 TIGRFAMs:TIGR00062 EMBL:AY048281
EMBL:AY079120 IPI:IPI01018435 RefSeq:NP_568310.1 UniGene:At.1768
UniGene:At.48483 ProteinModelPortal:Q94AC6 SMR:Q94AC6 STRING:Q94AC6
PRIDE:Q94AC6 EnsemblPlants:AT5G15220.1 GeneID:831374
KEGG:ath:AT5G15220 TAIR:At5g15220 InParanoid:Q94AC6 OMA:KWVHVEP
PhylomeDB:Q94AC6 Genevestigator:Q94AC6 Uniprot:Q94AC6
Length = 154
Score = 117 (46.2 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 39/106 (36%), Positives = 57/106 (53%)
Query: 24 RNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGF 83
R A KKT ST+N ++S +F G +K GE V G+I+ R +HPG VG
Sbjct: 45 RWATKKTAGSTKNG---RDSNPKF-LGVKKFGGESVIPGNIIVRQRGTR--FHPGDYVGI 98
Query: 84 GARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSGQEGL-PIYKK 128
G TLFA+++G+V+ EK + + W+ + +G L PIY K
Sbjct: 99 GKDHTLFALKEGRVRF--EKSKITGRK-WIHVDPTGGHVLHPIYTK 141
>WB|WBGene00185067 [details] [associations]
symbol:Y54G11A.17 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001684
Pfam:PF01016 GO:GO:0006898 GO:GO:0040010 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AL034488 SUPFAM:SSF110324
RefSeq:NP_001254426.1 ProteinModelPortal:C0Z3L6 SMR:C0Z3L6
STRING:C0Z3L6 EnsemblMetazoa:Y54G11A.17 GeneID:13187936
KEGG:cel:CELE_Y54G11A.17 CTD:13187936 WormBase:Y54G11A.17
OMA:LPFRGIF Uniprot:C0Z3L6
Length = 124
Score = 115 (45.5 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 36/109 (33%), Positives = 59/109 (54%)
Query: 41 KNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGF-GARGT--LFAMEKGKV 97
KN FR G +++GEVV K +L + +++YHPGLNV + RG L A G V
Sbjct: 21 KNLPFR---GIFRKDGEVVRKDDLLVNQF--KMNYHPGLNVYYENDRGERLLRAHCDGIV 75
Query: 98 KITVEKCNLNWKHTWVIANYSGQEGLPIYKKHIHVLPEEQHSRFRLVDE 146
+I+ EKC+ +++ + Y ++ + +YK +V+P E + L E
Sbjct: 76 RISQEKCDPDYEIE-EMKGYEYRKDVDLYKMTFNVIPLELSQKHTLRHE 123
>TAIR|locus:2039390 [details] [associations]
symbol:AT2G16930 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AC005167 HOGENOM:HOG000111610 ProtClustDB:CLSN2686202
PANTHER:PTHR15893 SUPFAM:SSF110324 TIGRFAMs:TIGR00062
UniGene:At.48483 EMBL:BT003674 EMBL:AK118574 IPI:IPI00537213
PIR:A84546 RefSeq:NP_001077904.1 RefSeq:NP_565398.1
RefSeq:NP_849961.1 ProteinModelPortal:Q9ZVX0 SMR:Q9ZVX0
IntAct:Q9ZVX0 STRING:Q9ZVX0 EnsemblPlants:AT2G16930.1
EnsemblPlants:AT2G16930.2 EnsemblPlants:AT2G16930.3 GeneID:816196
KEGG:ath:AT2G16930 TAIR:At2g16930 InParanoid:Q9ZVX0 OMA:LHPVYTS
PhylomeDB:Q9ZVX0 ArrayExpress:Q9ZVX0 Genevestigator:Q9ZVX0
Uniprot:Q9ZVX0
Length = 154
Score = 114 (45.2 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 39/106 (36%), Positives = 56/106 (52%)
Query: 24 RNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGF 83
R A KKT ST+N ++S +F G +K GE V G+I+ R +HPG VG
Sbjct: 45 RWATKKTAGSTKNG---RDSNPKF-LGVKKFGGESVIPGNIIVRQRGTR--FHPGDYVGI 98
Query: 84 GARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSGQEGL-PIYKK 128
G TLFA+++G+V+ EK + + W+ + G L PIY K
Sbjct: 99 GKDHTLFALKEGRVRF--EKSKITGRK-WIHVDPIGGHVLHPIYTK 141
>UNIPROTKB|D6RAN8 [details] [associations]
symbol:MRPL27 "39S ribosomal protein L27, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:CH471109 HOGENOM:HOG000111610 PANTHER:PTHR15893
SUPFAM:SSF110324 OrthoDB:EOG4J9N1F UniGene:Hs.7736 HGNC:HGNC:14483
ChiTaRS:MRPL27 EMBL:AC015909 EMBL:AC004707 IPI:IPI00472168
SMR:D6RAN8 Ensembl:ENST00000507088 Ensembl:ENST00000511860
Uniprot:D6RAN8
Length = 93
Score = 113 (44.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 29/91 (31%), Positives = 49/91 (53%)
Query: 55 EGEVVEKGSILYISYVQRLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVI 114
EG V G+I I+ + +HPG +VG G L+A+E+G V+ T E + ++T +
Sbjct: 2 EGHYVHAGNI--IATQRHFRWHPGAHVGVGKNKCLYALEEGIVRYTKEVYVPHPRNTEAV 59
Query: 115 ANYSG-QEGLPIYKKHIHVLPEEQHSRFRLV 144
+ +G +YK +HV+P + F+LV
Sbjct: 60 DLITRLPKGAVLYKTFVHVVPAKPEGTFKLV 90
>UNIPROTKB|B3KN43 [details] [associations]
symbol:MRPL27 "Mitochondrial ribosomal protein L27, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CH471109
PANTHER:PTHR15893 SUPFAM:SSF110324 UniGene:Hs.7736 HGNC:HGNC:14483
ChiTaRS:MRPL27 EMBL:AC015909 EMBL:AC004707 EMBL:AK023576
IPI:IPI00375343 SMR:B3KN43 STRING:B3KN43 Ensembl:ENST00000442592
UCSC:uc002iqr.2 Uniprot:B3KN43
Length = 94
Score = 107 (42.7 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 30/90 (33%), Positives = 49/90 (54%)
Query: 1 MALSLVNSFKNLLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVE 60
+AL + +LL+ + ++VR A+KK+G S++N K+SG R +G +K EG V
Sbjct: 6 LALRTRTAVTSLLSPTPATALAVRYASKKSGGSSKNLG-GKSSGRR--QGIKKMEGHYVH 62
Query: 61 KGSILYISYVQRLDYHPGLNVGFGARGTLF 90
G+I I+ + +HPG +V LF
Sbjct: 63 AGNI--IATQRHFRWHPGAHVSCSVAAPLF 90
>TIGR_CMR|SO_3651 [details] [associations]
symbol:SO_3651 "ribosomal protein L27" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
ProtClustDB:PRK05435 RefSeq:NP_719193.1 ProteinModelPortal:Q8EB81
SMR:Q8EB81 GeneID:1171310 KEGG:son:SO_3651 PATRIC:23526988
Uniprot:Q8EB81
Length = 84
Score = 105 (42.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 32/80 (40%), Positives = 42/80 (52%)
Query: 26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
A KK G STRN R + R G ++ GE V G+I+ + +H G+NVG G
Sbjct: 2 AHKKAGGSTRNG--RDSESKRL--GVKRFGGESVLAGNIIVRQ--RGTKFHAGVNVGIGR 55
Query: 86 RGTLFAMEKGKVKITVEKCN 105
TLFA+ GKVK V+ N
Sbjct: 56 DHTLFALTDGKVKFEVKGPN 75
>UNIPROTKB|Q9KUS9 [details] [associations]
symbol:rpmA "50S ribosomal protein L27" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001684 InterPro:IPR018261
Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831
HAMAP:MF_00539 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
eggNOG:COG0211 KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324
TIGRFAMs:TIGR00062 OMA:DGIVKFE ProtClustDB:PRK05435 PIR:C82322
RefSeq:NP_230090.1 ProteinModelPortal:Q9KUS9 SMR:Q9KUS9
DNASU:2615697 GeneID:2615697 KEGG:vch:VC0436 PATRIC:20079951
Uniprot:Q9KUS9
Length = 86
Score = 104 (41.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/80 (40%), Positives = 41/80 (51%)
Query: 26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
A KK G STRN R + R G ++ GE V G+I+ + +H G NVG G
Sbjct: 2 AHKKAGGSTRNG--RDSESKRL--GVKRFGGESVLAGNIIVRQ--RGTKFHAGTNVGIGK 55
Query: 86 RGTLFAMEKGKVKITVEKCN 105
TLFA+ GKVK V+ N
Sbjct: 56 DHTLFALSDGKVKFEVKGPN 75
>TIGR_CMR|VC_0436 [details] [associations]
symbol:VC_0436 "ribosomal protein L27" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
eggNOG:COG0211 KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324
TIGRFAMs:TIGR00062 OMA:DGIVKFE ProtClustDB:PRK05435 PIR:C82322
RefSeq:NP_230090.1 ProteinModelPortal:Q9KUS9 SMR:Q9KUS9
DNASU:2615697 GeneID:2615697 KEGG:vch:VC0436 PATRIC:20079951
Uniprot:Q9KUS9
Length = 86
Score = 104 (41.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 32/80 (40%), Positives = 41/80 (51%)
Query: 26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
A KK G STRN R + R G ++ GE V G+I+ + +H G NVG G
Sbjct: 2 AHKKAGGSTRNG--RDSESKRL--GVKRFGGESVLAGNIIVRQ--RGTKFHAGTNVGIGK 55
Query: 86 RGTLFAMEKGKVKITVEKCN 105
TLFA+ GKVK V+ N
Sbjct: 56 DHTLFALSDGKVKFEVKGPN 75
>UNIPROTKB|P0A7L8 [details] [associations]
symbol:rpmA "50S ribosomal subunit protein L27"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] InterPro:IPR001684 InterPro:IPR018261
Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831
HAMAP:MF_00539 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 EMBL:U18997 GO:GO:0005840
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 PDB:2VHM PDBsum:2VHM
PDB:2RDO PDBsum:2RDO EMBL:D13267 eggNOG:COG0211
HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324
TIGRFAMs:TIGR00062 PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12
PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y
PDBsum:3J11 PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS
PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB
PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO
PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV
PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N
PDB:3DF2 PDB:3DF4 PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P
PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01
PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ
PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR
PDB:4GAU PDBsum:1P85 PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8
PDBsum:1VT2 PDBsum:2AW4 PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC
PDBsum:2I2T PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO
PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI
PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1
PDBsum:2VHN PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2
PDBsum:3DF4 PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N
PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T PDBsum:3I20 PDBsum:3I22
PDBsum:3IZT PDBsum:3IZU PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR
PDBsum:3OAS PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ
PDBsum:3OFR PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S
PDBsum:3R8T PDBsum:4GAR PDBsum:4GAU PDB:3BBX PDBsum:3BBX
OMA:DGIVKFE ProtClustDB:PRK05435 PIR:JS0767 RefSeq:NP_417652.1
RefSeq:YP_491370.1 ProteinModelPortal:P0A7L8 SMR:P0A7L8
DIP:DIP-47933N IntAct:P0A7L8 MINT:MINT-1317488 PRIDE:P0A7L8
EnsemblBacteria:EBESCT00000003477 EnsemblBacteria:EBESCT00000016576
GeneID:12932199 GeneID:945190 KEGG:ecj:Y75_p3105 KEGG:eco:b3185
PATRIC:32121790 EchoBASE:EB4296 EcoGene:EG50002
BioCyc:EcoCyc:EG50002-MONOMER BioCyc:ECOL316407:JW3152-MONOMER
EvolutionaryTrace:P0A7L8 Genevestigator:P0A7L8 Uniprot:P0A7L8
Length = 85
Score = 100 (40.3 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 32/77 (41%), Positives = 39/77 (50%)
Query: 26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
A KK G STRN R + R G ++ GE V GSI+ + +H G NVG G
Sbjct: 2 AHKKAGGSTRNG--RDSEAKRL--GVKRFGGESVLAGSIIVRQ--RGTKFHAGANVGCGR 55
Query: 86 RGTLFAMEKGKVKITVE 102
TLFA GKVK V+
Sbjct: 56 DHTLFAKADGKVKFEVK 72
>UNIPROTKB|P66127 [details] [associations]
symbol:rpmA "50S ribosomal protein L27" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016
PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539
GO:GO:0005886 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:BX842579 eggNOG:COG0211
HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324
TIGRFAMs:TIGR00062 OMA:DGIVKFE ProtClustDB:PRK05435 PIR:G70680
RefSeq:NP_216957.1 RefSeq:NP_337000.1 RefSeq:YP_006515878.1
ProteinModelPortal:P66127 SMR:P66127 PRIDE:P66127
EnsemblBacteria:EBMYCT00000003382 EnsemblBacteria:EBMYCT00000072324
GeneID:13319151 GeneID:885919 GeneID:925819 KEGG:mtc:MT2517
KEGG:mtu:Rv2441c KEGG:mtv:RVBD_2441c PATRIC:18127284
TubercuList:Rv2441c Uniprot:P66127
Length = 86
Score = 100 (40.3 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 28/78 (35%), Positives = 43/78 (55%)
Query: 26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
A KK +S+RN R ++ R G ++ G+VV+ G IL + +HPG+NVG G
Sbjct: 2 AHKKGASSSRNG--RDSAAQRL--GVKRYGGQVVKAGEILVRQ--RGTKFHPGVNVGRGG 55
Query: 86 RGTLFAMEKGKVKITVEK 103
TLFA G V+ +++
Sbjct: 56 DDTLFAKTAGAVEFGIKR 73
>UNIPROTKB|D6RE11 [details] [associations]
symbol:MRPL27 "39S ribosomal protein L27, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001684
Pfam:PF01016 PRINTS:PR00063 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR15893 SUPFAM:SSF110324 HGNC:HGNC:14483
ChiTaRS:MRPL27 EMBL:AC015909 EMBL:AC004707 IPI:IPI00965395
ProteinModelPortal:D6RE11 SMR:D6RE11 Ensembl:ENST00000503633
ArrayExpress:D6RE11 Bgee:D6RE11 Uniprot:D6RE11
Length = 84
Score = 97 (39.2 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 1 MALSLVNSFKNLLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVE 60
+AL + +LL+ + ++VR A+KK+G S++N K+SG R +G +K EG V
Sbjct: 6 LALRTRTAVTSLLSPTPATALAVRYASKKSGGSSKNLG-GKSSGRR--QGIKKMEGHYVH 62
Query: 61 KGSILYISYVQRLDYHPG 78
G+I I+ + +HPG
Sbjct: 63 AGNI--IATQRHFRWHPG 78
>TIGR_CMR|NSE_0897 [details] [associations]
symbol:NSE_0897 "ribosomal protein L27" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
ProtClustDB:PRK05435 RefSeq:YP_506763.1 ProteinModelPortal:Q2GCN3
SMR:Q2GCN3 STRING:Q2GCN3 GeneID:3931866 KEGG:nse:NSE_0897
PATRIC:22681785 BioCyc:NSEN222891:GHFU-900-MONOMER Uniprot:Q2GCN3
Length = 82
Score = 97 (39.2 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 29/76 (38%), Positives = 39/76 (51%)
Query: 26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
A KK G S+ N R + G R G +K E V G I+ + +HPG NVG G+
Sbjct: 2 ATKKAGGSSSNG--RDSIGKRL--GVKKFGSERVIPGDIIVRQ--RGTKFHPGRNVGMGS 55
Query: 86 RGTLFAMEKGKVKITV 101
T+FAM+ G V +V
Sbjct: 56 DHTIFAMKSGSVSFSV 71
>TIGR_CMR|GSU_3235 [details] [associations]
symbol:GSU_3235 "ribosomal protein L27" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001684
InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114
PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412 GO:GO:0005840
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
ProtClustDB:PRK05435 RefSeq:NP_954276.1 ProteinModelPortal:Q747N0
SMR:Q747N0 GeneID:2688301 KEGG:gsu:GSU3235 PATRIC:22029317
BioCyc:GSUL243231:GH27-3213-MONOMER Uniprot:Q747N0
Length = 85
Score = 96 (38.9 bits), Expect = 0.00011, P = 0.00011
Identities = 31/73 (42%), Positives = 39/73 (53%)
Query: 26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
A KK STRN R + R G +K GE V+ G+I+Y ++ HPG NVG G
Sbjct: 2 AHKKGVGSTRNG--RDSESKRL--GCKKFGGETVKAGNIIYRQRGTQI--HPGTNVGCGK 55
Query: 86 RGTLFAMEKGKVK 98
TLFA+ G VK
Sbjct: 56 DYTLFALIDGVVK 68
>TIGR_CMR|CBU_0386 [details] [associations]
symbol:CBU_0386 "ribosomal protein L27" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
GO:GO:0005840 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
ProtClustDB:PRK05435 RefSeq:NP_819425.1 ProteinModelPortal:Q83ED9
SMR:Q83ED9 GeneID:1208269 KEGG:cbu:CBU_0386 PATRIC:17929469
BioCyc:CBUR227377:GJ7S-389-MONOMER Uniprot:Q83ED9
Length = 90
Score = 95 (38.5 bits), Expect = 0.00015, P = 0.00015
Identities = 31/77 (40%), Positives = 42/77 (54%)
Query: 26 AAKKTGTSTRNKPIRKNSGFRFPK--GFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGF 83
A KK G STRN ++S PK G ++ GE V G+I+ + Y PG N+G
Sbjct: 2 AHKKAGGSTRNG---RDSN---PKMLGVKRFGGERVLAGNIIVRQ--RGTHYRPGENMGM 53
Query: 84 GARGTLFAMEKGKVKIT 100
G TL+A+ +GKVK T
Sbjct: 54 GRDHTLYALIEGKVKFT 70
>TIGR_CMR|CPS_4511 [details] [associations]
symbol:CPS_4511 "ribosomal protein L27" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
ProtClustDB:PRK05435 RefSeq:YP_271159.1 ProteinModelPortal:Q47VL3
SMR:Q47VL3 STRING:Q47VL3 GeneID:3522522 KEGG:cps:CPS_4511
PATRIC:21471845 BioCyc:CPSY167879:GI48-4520-MONOMER Uniprot:Q47VL3
Length = 85
Score = 91 (37.1 bits), Expect = 0.00041, P = 0.00041
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
A KK STRN R + R G ++ GE V G+I+ R +H G N+G G
Sbjct: 2 AHKKAAGSTRNG--RDSEAKRL--GVKRFGGESVLAGNIIVRQRGTR--FHAGSNMGIGK 55
Query: 86 RGTLFAMEKGKVKITVE 102
TLFA+ GKV+ V+
Sbjct: 56 DHTLFALSDGKVQFEVK 72
>TIGR_CMR|BA_4674 [details] [associations]
symbol:BA_4674 "ribosomal protein L27" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 eggNOG:COG0211 HOGENOM:HOG000111610
KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324 TIGRFAMs:TIGR00062
OMA:DGIVKFE ProtClustDB:PRK05435 RefSeq:NP_846888.1
RefSeq:YP_021322.1 RefSeq:YP_030587.1 ProteinModelPortal:Q81LE8
SMR:Q81LE8 DNASU:1086262 EnsemblBacteria:EBBACT00000012483
EnsemblBacteria:EBBACT00000014952 EnsemblBacteria:EBBACT00000020200
GeneID:1086262 GeneID:2817426 GeneID:2849082 KEGG:ban:BA_4674
KEGG:bar:GBAA_4674 KEGG:bat:BAS4340
BioCyc:BANT260799:GJAJ-4395-MONOMER
BioCyc:BANT261594:GJ7F-4543-MONOMER Uniprot:Q81LE8
Length = 96
Score = 90 (36.7 bits), Expect = 0.00054, P = 0.00054
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
A+KK ST+N R + R G ++ +G+ V GSILY ++ +PG+NVG G
Sbjct: 10 ASKKGVGSTKNG--RDSQSKRL--GAKRADGQTVSGGSILYRQRGTKI--YPGVNVGRGG 63
Query: 86 RGTLFAMEKGKVK 98
TL+A G V+
Sbjct: 64 DDTLYAKVDGVVR 76
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 206 206 0.00097 111 3 11 22 0.37 33
31 0.47 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 591 (63 KB)
Total size of DFA: 163 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.38u 0.12s 17.50t Elapsed: 00:00:01
Total cpu time: 17.38u 0.12s 17.50t Elapsed: 00:00:01
Start: Thu Aug 15 14:22:53 2013 End: Thu Aug 15 14:22:54 2013