BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy7634
MALSLVNSFKNLLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVE
KGSILYISYVQRLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSGQ
EGLPIYKKHIHVLPEEQHSRFRLVDEPRVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQ
EGEVVEKGSILYISYVQRLDYHPGLN

High Scoring Gene Products

Symbol, full name Information P value
mRpL27
mitochondrial ribosomal protein L27
protein from Drosophila melanogaster 7.7e-32
Mrpl27
mitochondrial ribosomal protein L27
protein from Mus musculus 5.4e-15
Mrpl27
mitochondrial ribosomal protein L27
gene from Rattus norvegicus 6.9e-15
mrpl27
mitochondrial ribosomal protein L27
gene_product from Danio rerio 4.9e-14
MRPL27
39S ribosomal protein L27, mitochondrial
protein from Bos taurus 6.2e-14
LOC100737651
Uncharacterized protein
protein from Sus scrofa 7.9e-14
MRPL27
Uncharacterized protein
protein from Canis lupus familiaris 1.3e-13
MRPL27
39S ribosomal protein L27, mitochondrial
protein from Homo sapiens 2.7e-13
MRPL27
39S ribosomal protein L41, mitochondrial
protein from Homo sapiens 1.2e-10
AT5G15220 protein from Arabidopsis thaliana 4.2e-07
Y54G11A.17 gene from Caenorhabditis elegans 7.2e-07
AT2G16930 protein from Arabidopsis thaliana 9.4e-07
MRPL27
Mitochondrial ribosomal protein L27, isoform CRA_c
protein from Homo sapiens 1.2e-06
MRPL27
cDNA FLJ13514 fis, clone PLACE1005557, highly similar to Homo sapiens mitochondrial ribosomal protein L27 (MRPL27), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA
protein from Homo sapiens 6.1e-06
SO_3651
ribosomal protein L27
protein from Shewanella oneidensis MR-1 1.0e-05
rpmA
50S ribosomal protein L27
protein from Vibrio cholerae O1 biovar El Tor str. N16961 1.4e-05
VC_0436
ribosomal protein L27
protein from Vibrio cholerae O1 biovar El Tor 1.4e-05
rpmA
50S ribosomal subunit protein L27
protein from Escherichia coli K-12 3.9e-05
rpmA
50S ribosomal protein L27
protein from Mycobacterium tuberculosis 3.9e-05
MRPL27
39S ribosomal protein L41, mitochondrial
protein from Homo sapiens 8.6e-05
NSE_0897
ribosomal protein L27
protein from Neorickettsia sennetsu str. Miyayama 8.6e-05
GSU_3235
ribosomal protein L27
protein from Geobacter sulfurreducens PCA 0.00011
CBU_0386
ribosomal protein L27
protein from Coxiella burnetii RSA 493 0.00015
CPS_4511
ribosomal protein L27
protein from Colwellia psychrerythraea 34H 0.00041
BA_4674
ribosomal protein L27
protein from Bacillus anthracis str. Ames 0.00054

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy7634
        (206 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0053002 - symbol:mRpL27 "mitochondrial ribosomal p...   349  7.7e-32   1
MGI|MGI:2137224 - symbol:Mrpl27 "mitochondrial ribosomal ...   190  5.4e-15   1
RGD|1309090 - symbol:Mrpl27 "mitochondrial ribosomal prot...   189  6.9e-15   1
ZFIN|ZDB-GENE-050522-129 - symbol:mrpl27 "mitochondrial r...   181  4.9e-14   1
UNIPROTKB|Q32PC3 - symbol:MRPL27 "39S ribosomal protein L...   180  6.2e-14   1
UNIPROTKB|F1RT79 - symbol:LOC100737651 "Uncharacterized p...   179  7.9e-14   1
UNIPROTKB|E2QYN6 - symbol:MRPL27 "Uncharacterized protein...   177  1.3e-13   1
UNIPROTKB|Q9P0M9 - symbol:MRPL27 "39S ribosomal protein L...   174  2.7e-13   1
UNIPROTKB|H7C5U8 - symbol:MRPL27 "39S ribosomal protein L...   149  1.2e-10   1
UNIPROTKB|F1NU81 - symbol:MRPL27 "Uncharacterized protein...   143  5.2e-10   1
TAIR|locus:2150881 - symbol:AT5G15220 species:3702 "Arabi...   117  4.2e-07   1
WB|WBGene00185067 - symbol:Y54G11A.17 species:6239 "Caeno...   115  7.2e-07   1
TAIR|locus:2039390 - symbol:AT2G16930 species:3702 "Arabi...   114  9.4e-07   1
UNIPROTKB|D6RAN8 - symbol:MRPL27 "39S ribosomal protein L...   113  1.2e-06   1
UNIPROTKB|B3KN43 - symbol:MRPL27 "Mitochondrial ribosomal...   107  6.1e-06   1
TIGR_CMR|SO_3651 - symbol:SO_3651 "ribosomal protein L27"...   105  1.0e-05   1
UNIPROTKB|Q9KUS9 - symbol:rpmA "50S ribosomal protein L27...   104  1.4e-05   1
TIGR_CMR|VC_0436 - symbol:VC_0436 "ribosomal protein L27"...   104  1.4e-05   1
UNIPROTKB|P0A7L8 - symbol:rpmA "50S ribosomal subunit pro...   100  3.9e-05   1
UNIPROTKB|P66127 - symbol:rpmA "50S ribosomal protein L27...   100  3.9e-05   1
UNIPROTKB|D6RE11 - symbol:MRPL27 "39S ribosomal protein L...    97  8.6e-05   1
TIGR_CMR|NSE_0897 - symbol:NSE_0897 "ribosomal protein L2...    97  8.6e-05   1
TIGR_CMR|GSU_3235 - symbol:GSU_3235 "ribosomal protein L2...    96  0.00011   1
TIGR_CMR|CBU_0386 - symbol:CBU_0386 "ribosomal protein L2...    95  0.00015   1
TIGR_CMR|CPS_4511 - symbol:CPS_4511 "ribosomal protein L2...    91  0.00041   1
TIGR_CMR|BA_4674 - symbol:BA_4674 "ribosomal protein L27"...    90  0.00054   1


>FB|FBgn0053002 [details] [associations]
            symbol:mRpL27 "mitochondrial ribosomal protein L27"
            species:7227 "Drosophila melanogaster" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0005762 "mitochondrial
            large ribosomal subunit" evidence=ISS] [GO:0006412 "translation"
            evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063
            ProDom:PD003114 EMBL:AE014134 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 PANTHER:PTHR15893 SUPFAM:SSF110324
            GeneTree:ENSGT00390000014660 CTD:51264 RefSeq:NP_787971.1
            ProteinModelPortal:Q86BM8 SMR:Q86BM8 IntAct:Q86BM8 MINT:MINT-800309
            STRING:Q86BM8 PRIDE:Q86BM8 EnsemblMetazoa:FBtr0077451 GeneID:318825
            KEGG:dme:Dmel_CG33002 UCSC:CG33002-RA FlyBase:FBgn0053002
            InParanoid:Q86BM8 OMA:FAMEHGR OrthoDB:EOG47H46D PhylomeDB:Q86BM8
            GenomeRNAi:318825 NextBio:846234 ArrayExpress:Q86BM8 Bgee:Q86BM8
            Uniprot:Q86BM8
        Length = 138

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 73/136 (53%), Positives = 90/136 (66%)

Query:    13 LTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPK--GFRKQEGEVVEKGSILYISYV 70
             L   QP+  +VRNA+KKTG STRNK      G   PK  G+R Q+G  V +G+IL     
Sbjct:     9 LKADQPLMTTVRNASKKTGGSTRNK-----KGHARPKHRGWRVQDGHHVSEGTILATQLT 63

Query:    71 QRLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSGQEGLPIYKKHI 130
              R  +HPGLNVGFG  GTLFAME GKV +T E  + NW HTW+  NY+G++G  IYKK  
Sbjct:    64 TR--FHPGLNVGFGRNGTLFAMEHGKVYVTCEAIDPNWDHTWIQRNYAGRQGQNIYKKFF 121

Query:   131 HVLPEEQHSRFRLVDE 146
             +V+PE QH RFRLV+E
Sbjct:   122 NVVPENQHQRFRLVEE 137

 Score = 113 (44.8 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 32/67 (47%), Positives = 39/67 (58%)

Query:   145 DEP---RVRNAAKKTGTSTRNKPIRKNSGFRFPK--GFRKQEGEVVEKGSILYISYVQRL 199
             D+P    VRNA+KKTG STRNK      G   PK  G+R Q+G  V +G+IL      R 
Sbjct:    12 DQPLMTTVRNASKKTGGSTRNK-----KGHARPKHRGWRVQDGHHVSEGTILATQLTTR- 65

Query:   200 DYHPGLN 206
              +HPGLN
Sbjct:    66 -FHPGLN 71


>MGI|MGI:2137224 [details] [associations]
            symbol:Mrpl27 "mitochondrial ribosomal protein L27"
            species:10090 "Mus musculus" [GO:0003735 "structural constituent of
            ribosome" evidence=ISO] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
            "mitochondrial large ribosomal subunit" evidence=ISO] [GO:0005840
            "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=ISO]
            [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114
            PROSITE:PS00831 MGI:MGI:2137224 GO:GO:0005739 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 eggNOG:COG0211 HOGENOM:HOG000111610
            PANTHER:PTHR15893 SUPFAM:SSF110324 GeneTree:ENSGT00390000014660
            CTD:51264 HOVERGEN:HBG018255 OMA:HVVPAKP OrthoDB:EOG4J9N1F
            EMBL:AB049648 EMBL:BC030074 IPI:IPI00118227 RefSeq:NP_444391.1
            UniGene:Mm.34951 ProteinModelPortal:Q99N92 SMR:Q99N92 STRING:Q99N92
            PhosphoSite:Q99N92 PaxDb:Q99N92 PRIDE:Q99N92
            Ensembl:ENSMUST00000025278 GeneID:94064 KEGG:mmu:94064
            InParanoid:Q99N92 NextBio:352041 Bgee:Q99N92 CleanEx:MM_MRPL27
            Genevestigator:Q99N92 GermOnline:ENSMUSG00000024414
            GermOnline:ENSMUSG00000071867 Uniprot:Q99N92
        Length = 148

 Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
 Identities = 47/135 (34%), Positives = 77/135 (57%)

Query:    12 LLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQ 71
             LL+ + P  ++VR+A+KKTG S++N    K+ G  +  G +K EG  V  G+IL     +
Sbjct:    17 LLSPTAPTALAVRHASKKTGGSSKNLG-GKSRGKHY--GIKKMEGHYVHAGNILGTQ--R 71

Query:    72 RLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG-QEGLPIYKKHI 130
             +  +HPG +VG G    L+A+E+G V+ T +    N K+T  +   +   +G  +YK  +
Sbjct:    72 QFRWHPGAHVGLGRNKCLYALEEGIVRYTKDVYVPNPKNTEAVDLVTSLPKGAVLYKTFV 131

Query:   131 HVLPEEQHSRFRLVD 145
             HV+P +    F+LVD
Sbjct:   132 HVVPAKPEGTFKLVD 146


>RGD|1309090 [details] [associations]
            symbol:Mrpl27 "mitochondrial ribosomal protein L27"
            species:10116 "Rattus norvegicus" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] InterPro:IPR001684 Pfam:PF01016
            PRINTS:PR00063 ProDom:PD003114 RGD:1309090 GO:GO:0005739
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR15893
            SUPFAM:SSF110324 GeneTree:ENSGT00390000014660 OrthoDB:EOG4J9N1F
            IPI:IPI00369982 Ensembl:ENSRNOT00000004947 UCSC:RGD:1309090
            Uniprot:D3ZTW8
        Length = 150

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 47/135 (34%), Positives = 77/135 (57%)

Query:    12 LLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQ 71
             LL+ + P  ++VR+A+KKTG S++N    K+ G  +  G +K EG  V  G+IL     +
Sbjct:    19 LLSPTAPTALAVRSASKKTGGSSKNLG-GKSRGKHY--GIKKMEGHYVHAGNILGTQ--R 73

Query:    72 RLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG-QEGLPIYKKHI 130
             +  +HPG +VG G    L+A+E+G V+ T E    N K++  +   +   +G  +YK  +
Sbjct:    74 QFRWHPGAHVGLGKNKCLYALEEGIVRYTKEVYVPNPKNSEAVNLVTSLPKGAVLYKTFV 133

Query:   131 HVLPEEQHSRFRLVD 145
             HV+P +    F+LVD
Sbjct:   134 HVVPAKPEGTFKLVD 148


>ZFIN|ZDB-GENE-050522-129 [details] [associations]
            symbol:mrpl27 "mitochondrial ribosomal protein L27"
            species:7955 "Danio rerio" [GO:0005840 "ribosome" evidence=IEA]
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063
            ProDom:PD003114 ZFIN:ZDB-GENE-050522-129 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 HOGENOM:HOG000111610 PANTHER:PTHR15893
            SUPFAM:SSF110324 CTD:51264 HOVERGEN:HBG018255 OrthoDB:EOG4J9N1F
            eggNOG:NOG290823 EMBL:BC095759 IPI:IPI00493060
            RefSeq:NP_001018516.1 UniGene:Dr.85554 ProteinModelPortal:Q502C4
            STRING:Q502C4 GeneID:553709 KEGG:dre:553709 InParanoid:Q502C4
            NextBio:20880439 ArrayExpress:Q502C4 Uniprot:Q502C4
        Length = 148

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 50/146 (34%), Positives = 80/146 (54%)

Query:     1 MALSLVNSFKNLLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVE 60
             M+L L+ S   +L +  P  +  R A+KK+G S++N    K+SG R+  G++KQ+G  V 
Sbjct:     5 MSL-LLRSKSCILFSETPTVVLARFASKKSGGSSKNLG-GKSSGRRY--GYKKQDGNFVH 60

Query:    61 KGSILYISYVQRLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG- 119
              G+IL       + +HPG +VG G   TL+A+E G V+ T E      +      N    
Sbjct:    61 AGNILATQRKGLMRWHPGAHVGIGTNKTLYALEDGIVRYTKEVYVPLPRSAEARENIPQL 120

Query:   120 QEGLPIYKKHIHVLPEEQHSRFRLVD 145
              +G  +YK  ++V+P +Q ++F LVD
Sbjct:   121 PKGAVLYKTFVNVVPTKQENKFTLVD 146


>UNIPROTKB|Q32PC3 [details] [associations]
            symbol:MRPL27 "39S ribosomal protein L27, mitochondrial"
            species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063
            ProDom:PD003114 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 eggNOG:COG0211 HOGENOM:HOG000111610 PANTHER:PTHR15893
            SUPFAM:SSF110324 PDB:2FTC PDBsum:2FTC GeneTree:ENSGT00390000014660
            EMBL:BC108174 IPI:IPI00685896 RefSeq:NP_001032530.1 UniGene:Bt.3038
            ProteinModelPortal:Q32PC3 STRING:Q32PC3 Ensembl:ENSBTAT00000028954
            GeneID:510058 KEGG:bta:510058 CTD:51264 HOVERGEN:HBG018255
            InParanoid:Q32PC3 OMA:HVVPAKP OrthoDB:EOG4J9N1F
            EvolutionaryTrace:Q32PC3 NextBio:20869255 Uniprot:Q32PC3
        Length = 148

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 48/134 (35%), Positives = 73/134 (54%)

Query:    12 LLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQ 71
             LL+  Q   ++VR A+KKTG S++N    K+ G RF  G RK EG  V  G+IL     +
Sbjct:    17 LLSPPQAAALAVRYASKKTGGSSKNLG-GKSPGKRF--GIRKMEGHYVHAGNILATQ--R 71

Query:    72 RLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG-QEGLPIYKKHI 130
                +HPG +VG G    L+A+E+G V+ T E    +  ++  +   +   EG  +YK  +
Sbjct:    72 HFRWHPGAHVGLGKNKCLYALEEGVVRYTKEVYVPSPSNSEAVDLVTRLPEGAVLYKTFV 131

Query:   131 HVLPEEQHSRFRLV 144
             HV+P +    F+LV
Sbjct:   132 HVVPAKPEGTFKLV 145


>UNIPROTKB|F1RT79 [details] [associations]
            symbol:LOC100737651 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR001684 Pfam:PF01016
            PRINTS:PR00063 ProDom:PD003114 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 PANTHER:PTHR15893 SUPFAM:SSF110324
            GeneTree:ENSGT00390000014660 OMA:HVVPAKP EMBL:FP102382
            EMBL:FP565647 RefSeq:XP_003131628.3 RefSeq:XP_003483058.1
            Ensembl:ENSSSCT00000024316 Ensembl:ENSSSCT00000031817
            GeneID:100514487 GeneID:100737651 KEGG:ssc:100514487
            KEGG:ssc:100737651 Uniprot:F1RT79
        Length = 148

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 47/134 (35%), Positives = 73/134 (54%)

Query:    12 LLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQ 71
             LL+  Q   ++VR A+KKTG S++N    K+ G RF  G +K EG  V  G+IL     +
Sbjct:    17 LLSPPQAAALAVRYASKKTGGSSKNLG-GKSPGKRF--GIKKMEGHYVHAGNILATQ--R 71

Query:    72 RLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG-QEGLPIYKKHI 130
                +HPG +VG G    L+A+E+G V+ T E    N  ++  +   +   +G  +YK  +
Sbjct:    72 HFRWHPGAHVGLGKNKCLYALEEGVVRYTKEVYVPNPSNSEAVDLVTRLPQGAVLYKTFV 131

Query:   131 HVLPEEQHSRFRLV 144
             HV+P +    F+LV
Sbjct:   132 HVVPAKPEGTFKLV 145


>UNIPROTKB|E2QYN6 [details] [associations]
            symbol:MRPL27 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063
            ProDom:PD003114 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 PANTHER:PTHR15893 SUPFAM:SSF110324
            GeneTree:ENSGT00390000014660 OMA:HVVPAKP EMBL:AAEX03006536
            Ensembl:ENSCAFT00000026969 Uniprot:E2QYN6
        Length = 149

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 48/134 (35%), Positives = 73/134 (54%)

Query:    12 LLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQ 71
             LL+  Q   ++VR A+KKTG S++N    K+ G RF  G RK EG  V  G+IL     +
Sbjct:    18 LLSPPQAASLAVRYASKKTGGSSKNLG-GKSPGKRF--GLRKMEGHYVHAGNILATQ--R 72

Query:    72 RLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG-QEGLPIYKKHI 130
                +HPG +VG G +  L+A+E+G V  T E    +  +T  +   +   +G  +YK  +
Sbjct:    73 HFRWHPGAHVGLGKKKHLYALEEGVVHYTKEVYVPSPSNTEAVELVTRLPKGAVLYKTFV 132

Query:   131 HVLPEEQHSRFRLV 144
             HV+P +    F+LV
Sbjct:   133 HVVPVKPEGTFKLV 146


>UNIPROTKB|Q9P0M9 [details] [associations]
            symbol:MRPL27 "39S ribosomal protein L27, mitochondrial"
            species:9606 "Homo sapiens" [GO:0005762 "mitochondrial large
            ribosomal subunit" evidence=NAS] [GO:0006412 "translation"
            evidence=NAS] [GO:0003735 "structural constituent of ribosome"
            evidence=NAS] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063
            ProDom:PD003114 PROSITE:PS00831 GO:GO:0006412 GO:GO:0005762
            GO:GO:0003735 EMBL:CH471109 HOGENOM:HOG000111610 PANTHER:PTHR15893
            SUPFAM:SSF110324 CTD:51264 HOVERGEN:HBG018255 OMA:HVVPAKP
            EMBL:AB049647 EMBL:AF151084 EMBL:AK315758 EMBL:BC001066
            EMBL:BC021986 IPI:IPI00009444 RefSeq:NP_057588.1 UniGene:Hs.7736
            ProteinModelPortal:Q9P0M9 SMR:Q9P0M9 IntAct:Q9P0M9 STRING:Q9P0M9
            PhosphoSite:Q9P0M9 DMDM:20139806 PaxDb:Q9P0M9 PRIDE:Q9P0M9
            Ensembl:ENST00000225969 GeneID:51264 KEGG:hsa:51264 UCSC:uc002iqq.3
            GeneCards:GC17M048445 HGNC:HGNC:14483 HPA:HPA021416 MIM:611837
            neXtProt:NX_Q9P0M9 PharmGKB:PA30957 eggNOG:NOG290823
            PhylomeDB:Q9P0M9 ChiTaRS:MRPL27 GenomeRNAi:51264 NextBio:54441
            ArrayExpress:Q9P0M9 Bgee:Q9P0M9 CleanEx:HS_MRPL27
            Genevestigator:Q9P0M9 GermOnline:ENSG00000108826 Uniprot:Q9P0M9
        Length = 148

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 47/145 (32%), Positives = 81/145 (55%)

Query:     1 MALSLVNSFKNLLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVE 60
             +AL    +  +LL+ +    ++VR A+KK+G S++N    K+SG R  +G +K EG  V 
Sbjct:     6 LALRTRTAVTSLLSPTPATALAVRYASKKSGGSSKNLG-GKSSGRR--QGIKKMEGHYVH 62

Query:    61 KGSILYISYVQRLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG- 119
              G+I  I+  +   +HPG +VG G    L+A+E+G V+ T E    + ++T  +   +  
Sbjct:    63 AGNI--IATQRHFRWHPGAHVGVGKNKCLYALEEGIVRYTKEVYVPHPRNTEAVDLITRL 120

Query:   120 QEGLPIYKKHIHVLPEEQHSRFRLV 144
              +G  +YK  +HV+P +    F+LV
Sbjct:   121 PKGAVLYKTFVHVVPAKPEGTFKLV 145


>UNIPROTKB|H7C5U8 [details] [associations]
            symbol:MRPL27 "39S ribosomal protein L27, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001684
            Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR15893 SUPFAM:SSF110324
            HGNC:HGNC:14483 ChiTaRS:MRPL27 EMBL:AC015909 EMBL:AC004707
            Ensembl:ENST00000508200 Uniprot:H7C5U8
        Length = 136

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 44/130 (33%), Positives = 72/130 (55%)

Query:    21 MSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPG-- 78
             ++VR A+KK+G S++N    K+SG R  +G +K EG  V  G+I  I+  +   +HPG  
Sbjct:     9 LAVRYASKKSGGSSKNLG-GKSSGRR--QGIKKMEGHYVHAGNI--IATQRHFRWHPGAH 63

Query:    79 ---LNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSG-QEGLPIYKKHIHVLP 134
                L VG G    L+A+E+G V+ T E    + ++T  +   +   +G  +YK  +HV+P
Sbjct:    64 VCVLQVGVGKNKCLYALEEGIVRYTKEVYVPHPRNTEAVDLITRLPKGAVLYKTFVHVVP 123

Query:   135 EEQHSRFRLV 144
              +    F+LV
Sbjct:   124 AKPEGTFKLV 133


>UNIPROTKB|F1NU81 [details] [associations]
            symbol:MRPL27 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063
            ProDom:PD003114 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 PANTHER:PTHR15893 SUPFAM:SSF110324
            GeneTree:ENSGT00390000014660 OMA:HVVPAKP EMBL:AADN02053625
            IPI:IPI00594545 Ensembl:ENSGALT00000012452 Uniprot:F1NU81
        Length = 146

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 49/137 (35%), Positives = 73/137 (53%)

Query:    12 LLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQ 71
             +L+  Q    +VR A+KK+G S++N   R + G R+  G +K EG  V  G+IL     Q
Sbjct:    15 VLSVPQTSLAAVRCASKKSGGSSKNLGGR-SPGKRY--GAKKVEGAYVHAGNILA---TQ 68

Query:    72 RL-DYHPGLNVGFGARGTLFAMEKGKVKITVEKC---NLNWKHTWVIANYSGQEGLPIYK 127
             RL  +HPG +VG G   TL+A+E G V+ T E       + +   VI +    +G  +YK
Sbjct:    69 RLIRWHPGAHVGMGRNKTLYALEDGIVRYTKEVYVPPPRSSESREVICSLP--KGAILYK 126

Query:   128 KHIHVLPEEQHSRFRLV 144
               I V+P  +   F+LV
Sbjct:   127 TFISVIPTTEVGSFKLV 143


>TAIR|locus:2150881 [details] [associations]
            symbol:AT5G15220 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
            [GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR001684
            InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114
            PROSITE:PS00831 HAMAP:MF_00539 EMBL:CP002688 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 eggNOG:COG0211 ProtClustDB:CLSN2686202
            PANTHER:PTHR15893 SUPFAM:SSF110324 TIGRFAMs:TIGR00062 EMBL:AY048281
            EMBL:AY079120 IPI:IPI01018435 RefSeq:NP_568310.1 UniGene:At.1768
            UniGene:At.48483 ProteinModelPortal:Q94AC6 SMR:Q94AC6 STRING:Q94AC6
            PRIDE:Q94AC6 EnsemblPlants:AT5G15220.1 GeneID:831374
            KEGG:ath:AT5G15220 TAIR:At5g15220 InParanoid:Q94AC6 OMA:KWVHVEP
            PhylomeDB:Q94AC6 Genevestigator:Q94AC6 Uniprot:Q94AC6
        Length = 154

 Score = 117 (46.2 bits), Expect = 4.2e-07, P = 4.2e-07
 Identities = 39/106 (36%), Positives = 57/106 (53%)

Query:    24 RNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGF 83
             R A KKT  ST+N    ++S  +F  G +K  GE V  G+I+      R  +HPG  VG 
Sbjct:    45 RWATKKTAGSTKNG---RDSNPKF-LGVKKFGGESVIPGNIIVRQRGTR--FHPGDYVGI 98

Query:    84 GARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSGQEGL-PIYKK 128
             G   TLFA+++G+V+   EK  +  +  W+  + +G   L PIY K
Sbjct:    99 GKDHTLFALKEGRVRF--EKSKITGRK-WIHVDPTGGHVLHPIYTK 141


>WB|WBGene00185067 [details] [associations]
            symbol:Y54G11A.17 species:6239 "Caenorhabditis elegans"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040010
            "positive regulation of growth rate" evidence=IMP] [GO:0006898
            "receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001684
            Pfam:PF01016 GO:GO:0006898 GO:GO:0040010 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 EMBL:AL034488 SUPFAM:SSF110324
            RefSeq:NP_001254426.1 ProteinModelPortal:C0Z3L6 SMR:C0Z3L6
            STRING:C0Z3L6 EnsemblMetazoa:Y54G11A.17 GeneID:13187936
            KEGG:cel:CELE_Y54G11A.17 CTD:13187936 WormBase:Y54G11A.17
            OMA:LPFRGIF Uniprot:C0Z3L6
        Length = 124

 Score = 115 (45.5 bits), Expect = 7.2e-07, P = 7.2e-07
 Identities = 36/109 (33%), Positives = 59/109 (54%)

Query:    41 KNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGF-GARGT--LFAMEKGKV 97
             KN  FR   G  +++GEVV K  +L   +  +++YHPGLNV +   RG   L A   G V
Sbjct:    21 KNLPFR---GIFRKDGEVVRKDDLLVNQF--KMNYHPGLNVYYENDRGERLLRAHCDGIV 75

Query:    98 KITVEKCNLNWKHTWVIANYSGQEGLPIYKKHIHVLPEEQHSRFRLVDE 146
             +I+ EKC+ +++    +  Y  ++ + +YK   +V+P E   +  L  E
Sbjct:    76 RISQEKCDPDYEIE-EMKGYEYRKDVDLYKMTFNVIPLELSQKHTLRHE 123


>TAIR|locus:2039390 [details] [associations]
            symbol:AT2G16930 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0005840 "ribosome"
            evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
            InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
            ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            EMBL:AC005167 HOGENOM:HOG000111610 ProtClustDB:CLSN2686202
            PANTHER:PTHR15893 SUPFAM:SSF110324 TIGRFAMs:TIGR00062
            UniGene:At.48483 EMBL:BT003674 EMBL:AK118574 IPI:IPI00537213
            PIR:A84546 RefSeq:NP_001077904.1 RefSeq:NP_565398.1
            RefSeq:NP_849961.1 ProteinModelPortal:Q9ZVX0 SMR:Q9ZVX0
            IntAct:Q9ZVX0 STRING:Q9ZVX0 EnsemblPlants:AT2G16930.1
            EnsemblPlants:AT2G16930.2 EnsemblPlants:AT2G16930.3 GeneID:816196
            KEGG:ath:AT2G16930 TAIR:At2g16930 InParanoid:Q9ZVX0 OMA:LHPVYTS
            PhylomeDB:Q9ZVX0 ArrayExpress:Q9ZVX0 Genevestigator:Q9ZVX0
            Uniprot:Q9ZVX0
        Length = 154

 Score = 114 (45.2 bits), Expect = 9.4e-07, P = 9.4e-07
 Identities = 39/106 (36%), Positives = 56/106 (52%)

Query:    24 RNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGF 83
             R A KKT  ST+N    ++S  +F  G +K  GE V  G+I+      R  +HPG  VG 
Sbjct:    45 RWATKKTAGSTKNG---RDSNPKF-LGVKKFGGESVIPGNIIVRQRGTR--FHPGDYVGI 98

Query:    84 GARGTLFAMEKGKVKITVEKCNLNWKHTWVIANYSGQEGL-PIYKK 128
             G   TLFA+++G+V+   EK  +  +  W+  +  G   L PIY K
Sbjct:    99 GKDHTLFALKEGRVRF--EKSKITGRK-WIHVDPIGGHVLHPIYTK 141


>UNIPROTKB|D6RAN8 [details] [associations]
            symbol:MRPL27 "39S ribosomal protein L27, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
            evidence=IEA] InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063
            ProDom:PD003114 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 EMBL:CH471109 HOGENOM:HOG000111610 PANTHER:PTHR15893
            SUPFAM:SSF110324 OrthoDB:EOG4J9N1F UniGene:Hs.7736 HGNC:HGNC:14483
            ChiTaRS:MRPL27 EMBL:AC015909 EMBL:AC004707 IPI:IPI00472168
            SMR:D6RAN8 Ensembl:ENST00000507088 Ensembl:ENST00000511860
            Uniprot:D6RAN8
        Length = 93

 Score = 113 (44.8 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 29/91 (31%), Positives = 49/91 (53%)

Query:    55 EGEVVEKGSILYISYVQRLDYHPGLNVGFGARGTLFAMEKGKVKITVEKCNLNWKHTWVI 114
             EG  V  G+I  I+  +   +HPG +VG G    L+A+E+G V+ T E    + ++T  +
Sbjct:     2 EGHYVHAGNI--IATQRHFRWHPGAHVGVGKNKCLYALEEGIVRYTKEVYVPHPRNTEAV 59

Query:   115 ANYSG-QEGLPIYKKHIHVLPEEQHSRFRLV 144
                +   +G  +YK  +HV+P +    F+LV
Sbjct:    60 DLITRLPKGAVLYKTFVHVVPAKPEGTFKLV 90


>UNIPROTKB|B3KN43 [details] [associations]
            symbol:MRPL27 "Mitochondrial ribosomal protein L27, isoform
            CRA_a" species:9606 "Homo sapiens" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            InterPro:IPR001684 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CH471109
            PANTHER:PTHR15893 SUPFAM:SSF110324 UniGene:Hs.7736 HGNC:HGNC:14483
            ChiTaRS:MRPL27 EMBL:AC015909 EMBL:AC004707 EMBL:AK023576
            IPI:IPI00375343 SMR:B3KN43 STRING:B3KN43 Ensembl:ENST00000442592
            UCSC:uc002iqr.2 Uniprot:B3KN43
        Length = 94

 Score = 107 (42.7 bits), Expect = 6.1e-06, P = 6.1e-06
 Identities = 30/90 (33%), Positives = 49/90 (54%)

Query:     1 MALSLVNSFKNLLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVE 60
             +AL    +  +LL+ +    ++VR A+KK+G S++N    K+SG R  +G +K EG  V 
Sbjct:     6 LALRTRTAVTSLLSPTPATALAVRYASKKSGGSSKNLG-GKSSGRR--QGIKKMEGHYVH 62

Query:    61 KGSILYISYVQRLDYHPGLNVGFGARGTLF 90
              G+I  I+  +   +HPG +V       LF
Sbjct:    63 AGNI--IATQRHFRWHPGAHVSCSVAAPLF 90


>TIGR_CMR|SO_3651 [details] [associations]
            symbol:SO_3651 "ribosomal protein L27" species:211586
            "Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
            ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
            GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
            eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
            SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
            ProtClustDB:PRK05435 RefSeq:NP_719193.1 ProteinModelPortal:Q8EB81
            SMR:Q8EB81 GeneID:1171310 KEGG:son:SO_3651 PATRIC:23526988
            Uniprot:Q8EB81
        Length = 84

 Score = 105 (42.0 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 32/80 (40%), Positives = 42/80 (52%)

Query:    26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
             A KK G STRN   R +   R   G ++  GE V  G+I+     +   +H G+NVG G 
Sbjct:     2 AHKKAGGSTRNG--RDSESKRL--GVKRFGGESVLAGNIIVRQ--RGTKFHAGVNVGIGR 55

Query:    86 RGTLFAMEKGKVKITVEKCN 105
               TLFA+  GKVK  V+  N
Sbjct:    56 DHTLFALTDGKVKFEVKGPN 75


>UNIPROTKB|Q9KUS9 [details] [associations]
            symbol:rpmA "50S ribosomal protein L27" species:243277
            "Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
            "structural constituent of ribosome" evidence=ISS] [GO:0006412
            "translation" evidence=ISS] InterPro:IPR001684 InterPro:IPR018261
            Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831
            HAMAP:MF_00539 GO:GO:0006412 EMBL:AE003852
            GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
            eggNOG:COG0211 KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324
            TIGRFAMs:TIGR00062 OMA:DGIVKFE ProtClustDB:PRK05435 PIR:C82322
            RefSeq:NP_230090.1 ProteinModelPortal:Q9KUS9 SMR:Q9KUS9
            DNASU:2615697 GeneID:2615697 KEGG:vch:VC0436 PATRIC:20079951
            Uniprot:Q9KUS9
        Length = 86

 Score = 104 (41.7 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 32/80 (40%), Positives = 41/80 (51%)

Query:    26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
             A KK G STRN   R +   R   G ++  GE V  G+I+     +   +H G NVG G 
Sbjct:     2 AHKKAGGSTRNG--RDSESKRL--GVKRFGGESVLAGNIIVRQ--RGTKFHAGTNVGIGK 55

Query:    86 RGTLFAMEKGKVKITVEKCN 105
               TLFA+  GKVK  V+  N
Sbjct:    56 DHTLFALSDGKVKFEVKGPN 75


>TIGR_CMR|VC_0436 [details] [associations]
            symbol:VC_0436 "ribosomal protein L27" species:686 "Vibrio
            cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
            ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
            EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
            eggNOG:COG0211 KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324
            TIGRFAMs:TIGR00062 OMA:DGIVKFE ProtClustDB:PRK05435 PIR:C82322
            RefSeq:NP_230090.1 ProteinModelPortal:Q9KUS9 SMR:Q9KUS9
            DNASU:2615697 GeneID:2615697 KEGG:vch:VC0436 PATRIC:20079951
            Uniprot:Q9KUS9
        Length = 86

 Score = 104 (41.7 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 32/80 (40%), Positives = 41/80 (51%)

Query:    26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
             A KK G STRN   R +   R   G ++  GE V  G+I+     +   +H G NVG G 
Sbjct:     2 AHKKAGGSTRNG--RDSESKRL--GVKRFGGESVLAGNIIVRQ--RGTKFHAGTNVGIGK 55

Query:    86 RGTLFAMEKGKVKITVEKCN 105
               TLFA+  GKVK  V+  N
Sbjct:    56 DHTLFALSDGKVKFEVKGPN 75


>UNIPROTKB|P0A7L8 [details] [associations]
            symbol:rpmA "50S ribosomal subunit protein L27"
            species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
            evidence=IEA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            [GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000049
            "tRNA binding" evidence=IEA] InterPro:IPR001684 InterPro:IPR018261
            Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831
            HAMAP:MF_00539 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
            GenomeReviews:U00096_GR GO:GO:0006412 EMBL:U18997 GO:GO:0005840
            GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 PDB:2VHM PDBsum:2VHM
            PDB:2RDO PDBsum:2RDO EMBL:D13267 eggNOG:COG0211
            HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324
            TIGRFAMs:TIGR00062 PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12
            PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y
            PDBsum:3J11 PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS
            PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB
            PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO
            PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV
            PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N
            PDB:3DF2 PDB:3DF4 PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P
            PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01
            PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ
            PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR
            PDB:4GAU PDBsum:1P85 PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8
            PDBsum:1VT2 PDBsum:2AW4 PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC
            PDBsum:2I2T PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO
            PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI
            PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1
            PDBsum:2VHN PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2
            PDBsum:3DF4 PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N
            PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T PDBsum:3I20 PDBsum:3I22
            PDBsum:3IZT PDBsum:3IZU PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR
            PDBsum:3OAS PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ
            PDBsum:3OFR PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S
            PDBsum:3R8T PDBsum:4GAR PDBsum:4GAU PDB:3BBX PDBsum:3BBX
            OMA:DGIVKFE ProtClustDB:PRK05435 PIR:JS0767 RefSeq:NP_417652.1
            RefSeq:YP_491370.1 ProteinModelPortal:P0A7L8 SMR:P0A7L8
            DIP:DIP-47933N IntAct:P0A7L8 MINT:MINT-1317488 PRIDE:P0A7L8
            EnsemblBacteria:EBESCT00000003477 EnsemblBacteria:EBESCT00000016576
            GeneID:12932199 GeneID:945190 KEGG:ecj:Y75_p3105 KEGG:eco:b3185
            PATRIC:32121790 EchoBASE:EB4296 EcoGene:EG50002
            BioCyc:EcoCyc:EG50002-MONOMER BioCyc:ECOL316407:JW3152-MONOMER
            EvolutionaryTrace:P0A7L8 Genevestigator:P0A7L8 Uniprot:P0A7L8
        Length = 85

 Score = 100 (40.3 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 32/77 (41%), Positives = 39/77 (50%)

Query:    26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
             A KK G STRN   R +   R   G ++  GE V  GSI+     +   +H G NVG G 
Sbjct:     2 AHKKAGGSTRNG--RDSEAKRL--GVKRFGGESVLAGSIIVRQ--RGTKFHAGANVGCGR 55

Query:    86 RGTLFAMEKGKVKITVE 102
               TLFA   GKVK  V+
Sbjct:    56 DHTLFAKADGKVKFEVK 72


>UNIPROTKB|P66127 [details] [associations]
            symbol:rpmA "50S ribosomal protein L27" species:1773
            "Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
            evidence=IMP] InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016
            PRINTS:PR00063 ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539
            GO:GO:0005886 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
            GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 EMBL:BX842579 eggNOG:COG0211
            HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324
            TIGRFAMs:TIGR00062 OMA:DGIVKFE ProtClustDB:PRK05435 PIR:G70680
            RefSeq:NP_216957.1 RefSeq:NP_337000.1 RefSeq:YP_006515878.1
            ProteinModelPortal:P66127 SMR:P66127 PRIDE:P66127
            EnsemblBacteria:EBMYCT00000003382 EnsemblBacteria:EBMYCT00000072324
            GeneID:13319151 GeneID:885919 GeneID:925819 KEGG:mtc:MT2517
            KEGG:mtu:Rv2441c KEGG:mtv:RVBD_2441c PATRIC:18127284
            TubercuList:Rv2441c Uniprot:P66127
        Length = 86

 Score = 100 (40.3 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 28/78 (35%), Positives = 43/78 (55%)

Query:    26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
             A KK  +S+RN   R ++  R   G ++  G+VV+ G IL     +   +HPG+NVG G 
Sbjct:     2 AHKKGASSSRNG--RDSAAQRL--GVKRYGGQVVKAGEILVRQ--RGTKFHPGVNVGRGG 55

Query:    86 RGTLFAMEKGKVKITVEK 103
               TLFA   G V+  +++
Sbjct:    56 DDTLFAKTAGAVEFGIKR 73


>UNIPROTKB|D6RE11 [details] [associations]
            symbol:MRPL27 "39S ribosomal protein L27, mitochondrial"
            species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001684
            Pfam:PF01016 PRINTS:PR00063 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 PANTHER:PTHR15893 SUPFAM:SSF110324 HGNC:HGNC:14483
            ChiTaRS:MRPL27 EMBL:AC015909 EMBL:AC004707 IPI:IPI00965395
            ProteinModelPortal:D6RE11 SMR:D6RE11 Ensembl:ENST00000503633
            ArrayExpress:D6RE11 Bgee:D6RE11 Uniprot:D6RE11
        Length = 84

 Score = 97 (39.2 bits), Expect = 8.6e-05, P = 8.6e-05
 Identities = 27/78 (34%), Positives = 45/78 (57%)

Query:     1 MALSLVNSFKNLLTTSQPVCMSVRNAAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVE 60
             +AL    +  +LL+ +    ++VR A+KK+G S++N    K+SG R  +G +K EG  V 
Sbjct:     6 LALRTRTAVTSLLSPTPATALAVRYASKKSGGSSKNLG-GKSSGRR--QGIKKMEGHYVH 62

Query:    61 KGSILYISYVQRLDYHPG 78
              G+I  I+  +   +HPG
Sbjct:    63 AGNI--IATQRHFRWHPG 78


>TIGR_CMR|NSE_0897 [details] [associations]
            symbol:NSE_0897 "ribosomal protein L27" species:222891
            "Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
            constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
            evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
            InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
            ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 EMBL:CP000237 GenomeReviews:CP000237_GR
            eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
            SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
            ProtClustDB:PRK05435 RefSeq:YP_506763.1 ProteinModelPortal:Q2GCN3
            SMR:Q2GCN3 STRING:Q2GCN3 GeneID:3931866 KEGG:nse:NSE_0897
            PATRIC:22681785 BioCyc:NSEN222891:GHFU-900-MONOMER Uniprot:Q2GCN3
        Length = 82

 Score = 97 (39.2 bits), Expect = 8.6e-05, P = 8.6e-05
 Identities = 29/76 (38%), Positives = 39/76 (51%)

Query:    26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
             A KK G S+ N   R + G R   G +K   E V  G I+     +   +HPG NVG G+
Sbjct:     2 ATKKAGGSSSNG--RDSIGKRL--GVKKFGSERVIPGDIIVRQ--RGTKFHPGRNVGMGS 55

Query:    86 RGTLFAMEKGKVKITV 101
               T+FAM+ G V  +V
Sbjct:    56 DHTIFAMKSGSVSFSV 71


>TIGR_CMR|GSU_3235 [details] [associations]
            symbol:GSU_3235 "ribosomal protein L27" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001684
            InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063 ProDom:PD003114
            PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412 GO:GO:0005840
            EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
            eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
            SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
            ProtClustDB:PRK05435 RefSeq:NP_954276.1 ProteinModelPortal:Q747N0
            SMR:Q747N0 GeneID:2688301 KEGG:gsu:GSU3235 PATRIC:22029317
            BioCyc:GSUL243231:GH27-3213-MONOMER Uniprot:Q747N0
        Length = 85

 Score = 96 (38.9 bits), Expect = 0.00011, P = 0.00011
 Identities = 31/73 (42%), Positives = 39/73 (53%)

Query:    26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
             A KK   STRN   R +   R   G +K  GE V+ G+I+Y     ++  HPG NVG G 
Sbjct:     2 AHKKGVGSTRNG--RDSESKRL--GCKKFGGETVKAGNIIYRQRGTQI--HPGTNVGCGK 55

Query:    86 RGTLFAMEKGKVK 98
               TLFA+  G VK
Sbjct:    56 DYTLFALIDGVVK 68


>TIGR_CMR|CBU_0386 [details] [associations]
            symbol:CBU_0386 "ribosomal protein L27" species:227377
            "Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
            ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
            ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
            GO:GO:0005840 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
            eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
            SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
            ProtClustDB:PRK05435 RefSeq:NP_819425.1 ProteinModelPortal:Q83ED9
            SMR:Q83ED9 GeneID:1208269 KEGG:cbu:CBU_0386 PATRIC:17929469
            BioCyc:CBUR227377:GJ7S-389-MONOMER Uniprot:Q83ED9
        Length = 90

 Score = 95 (38.5 bits), Expect = 0.00015, P = 0.00015
 Identities = 31/77 (40%), Positives = 42/77 (54%)

Query:    26 AAKKTGTSTRNKPIRKNSGFRFPK--GFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGF 83
             A KK G STRN    ++S    PK  G ++  GE V  G+I+     +   Y PG N+G 
Sbjct:     2 AHKKAGGSTRNG---RDSN---PKMLGVKRFGGERVLAGNIIVRQ--RGTHYRPGENMGM 53

Query:    84 GARGTLFAMEKGKVKIT 100
             G   TL+A+ +GKVK T
Sbjct:    54 GRDHTLYALIEGKVKFT 70


>TIGR_CMR|CPS_4511 [details] [associations]
            symbol:CPS_4511 "ribosomal protein L27" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0015934 "large ribosomal subunit" evidence=ISS]
            InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
            ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 GO:GO:0006412
            GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
            eggNOG:COG0211 HOGENOM:HOG000111610 KO:K02899 PANTHER:PTHR15893
            SUPFAM:SSF110324 TIGRFAMs:TIGR00062 OMA:DGIVKFE
            ProtClustDB:PRK05435 RefSeq:YP_271159.1 ProteinModelPortal:Q47VL3
            SMR:Q47VL3 STRING:Q47VL3 GeneID:3522522 KEGG:cps:CPS_4511
            PATRIC:21471845 BioCyc:CPSY167879:GI48-4520-MONOMER Uniprot:Q47VL3
        Length = 85

 Score = 91 (37.1 bits), Expect = 0.00041, P = 0.00041
 Identities = 29/77 (37%), Positives = 39/77 (50%)

Query:    26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
             A KK   STRN   R +   R   G ++  GE V  G+I+      R  +H G N+G G 
Sbjct:     2 AHKKAAGSTRNG--RDSEAKRL--GVKRFGGESVLAGNIIVRQRGTR--FHAGSNMGIGK 55

Query:    86 RGTLFAMEKGKVKITVE 102
               TLFA+  GKV+  V+
Sbjct:    56 DHTLFALSDGKVQFEVK 72


>TIGR_CMR|BA_4674 [details] [associations]
            symbol:BA_4674 "ribosomal protein L27" species:198094
            "Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
            of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            InterPro:IPR001684 InterPro:IPR018261 Pfam:PF01016 PRINTS:PR00063
            ProDom:PD003114 PROSITE:PS00831 HAMAP:MF_00539 EMBL:AE016879
            EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 eggNOG:COG0211 HOGENOM:HOG000111610
            KO:K02899 PANTHER:PTHR15893 SUPFAM:SSF110324 TIGRFAMs:TIGR00062
            OMA:DGIVKFE ProtClustDB:PRK05435 RefSeq:NP_846888.1
            RefSeq:YP_021322.1 RefSeq:YP_030587.1 ProteinModelPortal:Q81LE8
            SMR:Q81LE8 DNASU:1086262 EnsemblBacteria:EBBACT00000012483
            EnsemblBacteria:EBBACT00000014952 EnsemblBacteria:EBBACT00000020200
            GeneID:1086262 GeneID:2817426 GeneID:2849082 KEGG:ban:BA_4674
            KEGG:bar:GBAA_4674 KEGG:bat:BAS4340
            BioCyc:BANT260799:GJAJ-4395-MONOMER
            BioCyc:BANT261594:GJ7F-4543-MONOMER Uniprot:Q81LE8
        Length = 96

 Score = 90 (36.7 bits), Expect = 0.00054, P = 0.00054
 Identities = 27/73 (36%), Positives = 40/73 (54%)

Query:    26 AAKKTGTSTRNKPIRKNSGFRFPKGFRKQEGEVVEKGSILYISYVQRLDYHPGLNVGFGA 85
             A+KK   ST+N   R +   R   G ++ +G+ V  GSILY     ++  +PG+NVG G 
Sbjct:    10 ASKKGVGSTKNG--RDSQSKRL--GAKRADGQTVSGGSILYRQRGTKI--YPGVNVGRGG 63

Query:    86 RGTLFAMEKGKVK 98
               TL+A   G V+
Sbjct:    64 DDTLYAKVDGVVR 76


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.135   0.402    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      206       206   0.00097  111 3  11 22  0.37    33
                                                     31  0.47    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  26
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  163 KB (2096 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.38u 0.12s 17.50t   Elapsed:  00:00:01
  Total cpu time:  17.38u 0.12s 17.50t   Elapsed:  00:00:01
  Start:  Thu Aug 15 14:22:53 2013   End:  Thu Aug 15 14:22:54 2013

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