Query psy7639
Match_columns 2568
No_of_seqs 1339 out of 7628
Neff 7.7
Searched_HMMs 46136
Date Fri Aug 16 23:31:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7639.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7639hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0100|consensus 100.0 8E-149 2E-153 1272.1 56.7 574 1981-2558 74-651 (663)
2 KOG0100|consensus 100.0 1E-134 2E-139 1155.9 56.2 602 1379-1984 40-650 (663)
3 KOG0101|consensus 100.0 1E-112 3E-117 1072.7 49.0 570 1981-2551 45-615 (620)
4 KOG0102|consensus 100.0 4E-109 8E-114 988.0 40.3 555 1986-2553 71-630 (640)
5 PTZ00009 heat shock 70 kDa pro 100.0 7E-102 2E-106 1046.3 68.9 584 1984-2568 45-653 (653)
6 KOG0102|consensus 100.0 3E-102 6E-107 929.2 40.6 592 1377-1980 29-630 (640)
7 KOG0101|consensus 100.0 4E-101 8E-106 968.8 48.7 599 1379-1978 11-615 (620)
8 PTZ00186 heat shock 70 kDa pre 100.0 1.7E-99 4E-104 1010.7 67.0 553 1985-2551 69-626 (657)
9 PRK13411 molecular chaperone D 100.0 7.3E-97 2E-101 996.0 67.1 554 1986-2553 46-604 (653)
10 PRK13410 molecular chaperone D 100.0 1.9E-96 4E-101 987.0 65.0 552 1986-2550 46-607 (668)
11 PTZ00400 DnaK-type molecular c 100.0 1.4E-95 3E-100 983.3 65.3 550 1986-2551 85-639 (663)
12 PLN03184 chloroplast Hsp70; Pr 100.0 3E-95 6E-100 979.9 67.7 553 1986-2554 83-640 (673)
13 PTZ00186 heat shock 70 kDa pre 100.0 1.2E-93 2.6E-98 954.5 66.2 609 1379-2000 31-648 (657)
14 PRK00290 dnaK molecular chaper 100.0 1.1E-92 2.3E-97 959.3 68.9 549 1985-2551 45-598 (627)
15 CHL00094 dnaK heat shock prote 100.0 1E-91 2.2E-96 945.8 66.2 549 1986-2550 46-599 (621)
16 TIGR02350 prok_dnaK chaperone 100.0 4.6E-91 9.9E-96 942.0 66.8 547 1986-2549 44-594 (595)
17 TIGR01991 HscA Fe-S protein as 100.0 8.6E-91 1.9E-95 930.2 67.0 543 1986-2551 43-586 (599)
18 PTZ00009 heat shock 70 kDa pro 100.0 1E-90 2.2E-95 938.1 68.2 600 1381-1981 10-618 (653)
19 PRK13411 molecular chaperone D 100.0 2E-90 4.4E-95 933.5 65.4 588 1381-1981 8-605 (653)
20 PRK05183 hscA chaperone protei 100.0 5E-90 1.1E-94 924.0 64.1 540 1986-2551 62-602 (616)
21 COG0443 DnaK Molecular chapero 100.0 6.9E-91 1.5E-95 915.9 54.6 528 1987-2550 51-578 (579)
22 PTZ00400 DnaK-type molecular c 100.0 3.7E-89 7.9E-94 921.1 65.2 585 1381-1980 47-641 (663)
23 PRK13410 molecular chaperone D 100.0 1.6E-88 3.5E-93 910.4 68.9 580 1381-1975 8-601 (668)
24 PLN03184 chloroplast Hsp70; Pr 100.0 3.2E-88 6.8E-93 911.8 66.3 590 1381-1985 45-644 (673)
25 PRK00290 dnaK molecular chaper 100.0 3E-86 6.5E-91 896.5 64.7 583 1381-1980 8-600 (627)
26 TIGR01991 HscA Fe-S protein as 100.0 4.3E-86 9.4E-91 884.9 65.2 575 1381-1977 5-585 (599)
27 PRK01433 hscA chaperone protei 100.0 2.9E-86 6.4E-91 878.0 62.3 517 1986-2550 62-587 (595)
28 KOG0103|consensus 100.0 1.3E-87 2.8E-92 829.1 45.5 554 1981-2542 39-640 (727)
29 CHL00094 dnaK heat shock prote 100.0 7.1E-85 1.5E-89 879.4 66.1 582 1381-1977 8-599 (621)
30 PRK05183 hscA chaperone protei 100.0 6.3E-85 1.4E-89 874.8 64.7 574 1379-1977 23-601 (616)
31 TIGR02350 prok_dnaK chaperone 100.0 4.8E-85 1E-89 883.4 64.1 580 1381-1977 6-595 (595)
32 COG0443 DnaK Molecular chapero 100.0 4.9E-85 1.1E-89 860.4 56.3 562 1380-1977 10-578 (579)
33 PRK01433 hscA chaperone protei 100.0 4.4E-83 9.5E-88 847.7 59.6 552 1379-1978 23-588 (595)
34 PF00012 HSP70: Hsp70 protein; 100.0 3.7E-82 8E-87 867.1 62.9 557 1985-2550 41-602 (602)
35 KOG0104|consensus 100.0 1.5E-78 3.2E-83 745.4 46.2 564 1977-2551 57-738 (902)
36 KOG0103|consensus 100.0 3.9E-78 8.4E-83 745.2 48.4 591 1-608 1-646 (727)
37 PF00012 HSP70: Hsp70 protein; 100.0 2.8E-77 6E-82 818.9 60.0 588 1381-1977 5-602 (602)
38 KOG0104|consensus 100.0 4.2E-72 9.1E-77 688.5 43.2 591 2-609 23-738 (902)
39 PRK11678 putative chaperone; P 100.0 9.8E-47 2.1E-51 484.5 33.9 297 1986-2320 84-448 (450)
40 PRK11678 putative chaperone; P 100.0 2.1E-46 4.5E-51 481.5 34.8 329 1381-1747 6-448 (450)
41 PRK13928 rod shape-determining 100.0 1.6E-31 3.6E-36 338.2 28.9 245 2055-2321 72-325 (336)
42 PRK13928 rod shape-determining 100.0 1.9E-31 4.1E-36 337.7 28.8 308 4-378 6-324 (336)
43 PRK13929 rod-share determining 100.0 3.4E-31 7.3E-36 334.0 28.3 307 2-375 5-324 (335)
44 PRK13929 rod-share determining 100.0 1.2E-30 2.6E-35 328.9 27.2 271 1988-2317 43-324 (335)
45 TIGR00904 mreB cell shape dete 100.0 2.4E-28 5.2E-33 309.3 28.3 308 3-377 4-327 (333)
46 PRK13927 rod shape-determining 100.0 2.3E-28 5E-33 310.3 28.0 308 3-378 7-325 (334)
47 PRK13927 rod shape-determining 100.0 2.5E-28 5.4E-33 310.0 27.0 220 2079-2320 97-325 (334)
48 TIGR00904 mreB cell shape dete 100.0 2.7E-27 5.8E-32 299.8 27.2 238 2056-2319 80-327 (333)
49 PRK13930 rod shape-determining 100.0 6.3E-27 1.4E-31 297.7 29.1 308 4-378 11-329 (335)
50 TIGR02529 EutJ ethanolamine ut 99.9 2.1E-27 4.5E-32 283.8 19.9 204 2052-2315 35-238 (239)
51 PRK13930 rod shape-determining 99.9 2.1E-26 4.5E-31 292.9 29.0 242 2058-2321 80-330 (335)
52 PF06723 MreB_Mbl: MreB/Mbl pr 99.9 4.8E-25 1E-29 270.1 21.1 307 2-375 2-319 (326)
53 TIGR02529 EutJ ethanolamine ut 99.9 9.8E-25 2.1E-29 260.9 21.3 204 1479-1742 35-238 (239)
54 PRK15080 ethanolamine utilizat 99.9 2E-23 4.3E-28 254.1 25.0 202 2056-2317 66-267 (267)
55 COG1077 MreB Actin-like ATPase 99.9 4.9E-23 1.1E-27 239.5 24.4 310 3-379 8-333 (342)
56 PRK15080 ethanolamine utilizat 99.9 1E-21 2.3E-26 239.1 23.0 202 1483-1744 66-267 (267)
57 PF06723 MreB_Mbl: MreB/Mbl pr 99.9 4.8E-21 1E-25 235.1 20.6 296 1381-1744 7-319 (326)
58 COG1077 MreB Actin-like ATPase 99.8 8E-18 1.7E-22 196.5 24.1 247 684-952 75-333 (342)
59 TIGR01174 ftsA cell division p 99.7 2.8E-17 6E-22 211.6 21.1 173 2094-2296 160-340 (371)
60 TIGR01174 ftsA cell division p 99.7 1.2E-16 2.5E-21 205.9 23.8 194 150-374 158-371 (371)
61 PRK09472 ftsA cell division pr 99.7 5.9E-16 1.3E-20 201.2 27.8 196 152-377 168-388 (420)
62 PRK09472 ftsA cell division pr 99.7 1.3E-15 2.8E-20 198.1 24.1 197 1518-1745 166-387 (420)
63 COG0849 ftsA Cell division ATP 99.5 6.7E-12 1.5E-16 158.2 26.4 323 3-378 8-381 (418)
64 COG0849 ftsA Cell division ATP 99.4 3E-12 6.5E-17 161.3 17.3 210 1504-1747 154-381 (418)
65 COG4820 EutJ Ethanolamine util 99.4 3.3E-13 7.2E-18 145.4 6.0 195 1488-1742 76-270 (277)
66 cd00012 ACTIN Actin; An ubiqui 99.2 1.3E-10 2.9E-15 150.4 17.2 238 116-377 76-347 (371)
67 PRK13917 plasmid segregation p 99.1 2.6E-09 5.7E-14 135.4 19.7 210 135-380 109-339 (344)
68 COG4820 EutJ Ethanolamine util 99.1 7.5E-11 1.6E-15 127.6 4.5 195 692-946 76-270 (277)
69 smart00268 ACTIN Actin. ACTIN 99.0 8.9E-10 1.9E-14 142.9 13.8 236 115-377 75-347 (373)
70 cd00012 ACTIN Actin; An ubiqui 99.0 4.1E-09 8.8E-14 136.6 15.8 239 688-950 75-347 (371)
71 PRK13917 plasmid segregation p 98.9 3.8E-08 8.3E-13 124.9 19.2 211 1504-1750 109-340 (344)
72 smart00268 ACTIN Actin. ACTIN 98.8 1.2E-08 2.6E-13 132.3 13.2 239 687-950 74-347 (373)
73 TIGR03739 PRTRC_D PRTRC system 98.8 2.2E-07 4.8E-12 117.4 20.4 207 135-375 101-318 (320)
74 TIGR03739 PRTRC_D PRTRC system 98.6 1.4E-06 3E-11 110.3 18.6 223 1484-1744 85-318 (320)
75 PF00022 Actin: Actin; InterP 98.5 9.4E-07 2E-11 115.8 16.8 247 687-951 73-368 (393)
76 PF00022 Actin: Actin; InterP 98.5 1.3E-06 2.8E-11 114.4 17.9 246 115-377 74-367 (393)
77 TIGR01175 pilM type IV pilus a 98.5 1.7E-06 3.6E-11 111.5 17.0 164 1508-1722 136-307 (348)
78 TIGR01175 pilM type IV pilus a 98.4 3.7E-06 8E-11 108.3 18.6 159 721-926 141-307 (348)
79 PTZ00280 Actin-related protein 98.4 4.2E-06 9.1E-11 109.9 18.6 222 688-926 82-337 (414)
80 PTZ00280 Actin-related protein 98.4 5.1E-06 1.1E-10 109.1 19.1 224 1484-1722 82-337 (414)
81 PF11104 PilM_2: Type IV pilus 98.4 3.8E-06 8.2E-11 107.4 15.9 180 1519-1744 136-339 (340)
82 PTZ00452 actin; Provisional 98.4 6.4E-06 1.4E-10 106.3 18.0 233 117-376 82-348 (375)
83 PTZ00281 actin; Provisional 98.4 3E-06 6.4E-11 109.7 14.6 217 137-376 102-349 (376)
84 PF11104 PilM_2: Type IV pilus 98.4 5.8E-06 1.3E-10 105.7 17.1 181 722-948 135-339 (340)
85 PTZ00004 actin-2; Provisional 98.1 2.3E-05 4.9E-10 101.7 15.7 217 136-376 101-351 (378)
86 PTZ00004 actin-2; Provisional 98.1 2E-05 4.3E-10 102.2 14.3 233 688-949 81-351 (378)
87 PTZ00281 actin; Provisional 98.1 2.7E-05 5.9E-10 100.8 15.1 237 688-950 81-350 (376)
88 PF07520 SrfB: Virulence facto 98.1 0.00031 6.6E-09 95.7 24.5 333 1406-1745 325-833 (1002)
89 PTZ00466 actin-like protein; P 98.0 6.9E-05 1.5E-09 96.9 15.8 236 688-949 87-353 (380)
90 PTZ00466 actin-like protein; P 98.0 6.9E-05 1.5E-09 96.9 15.7 235 116-376 88-353 (380)
91 PF06406 StbA: StbA protein; 98.0 3.7E-05 8E-10 97.1 12.7 174 1534-1741 141-316 (318)
92 PTZ00452 actin; Provisional 97.9 0.0001 2.2E-09 95.3 15.7 236 688-950 80-349 (375)
93 PF06406 StbA: StbA protein; 97.9 4.6E-05 1E-09 96.3 11.9 174 738-945 141-316 (318)
94 PF07520 SrfB: Virulence facto 97.9 0.0013 2.8E-08 89.9 24.3 263 110-378 416-835 (1002)
95 TIGR00241 CoA_E_activ CoA-subs 97.8 0.00021 4.6E-09 87.2 14.5 173 1537-1742 73-247 (248)
96 TIGR00241 CoA_E_activ CoA-subs 97.7 0.00059 1.3E-08 83.3 15.8 170 741-947 73-248 (248)
97 PF08841 DDR: Diol dehydratase 97.6 0.0022 4.7E-08 75.1 16.9 192 1526-1743 103-328 (332)
98 KOG0679|consensus 97.5 0.002 4.2E-08 78.4 16.7 114 115-242 86-202 (426)
99 KOG0679|consensus 97.5 0.0022 4.8E-08 78.0 16.9 115 687-815 85-202 (426)
100 COG4972 PilM Tfp pilus assembl 97.3 0.0025 5.5E-08 76.6 13.2 174 1523-1744 153-332 (354)
101 COG5277 Actin and related prot 97.1 0.0055 1.2E-07 79.9 15.5 98 709-815 106-204 (444)
102 COG4972 PilM Tfp pilus assembl 97.1 0.0092 2E-07 72.0 15.5 172 726-945 152-329 (354)
103 COG5277 Actin and related prot 97.0 0.008 1.7E-07 78.4 14.8 97 137-242 107-204 (444)
104 PF08841 DDR: Diol dehydratase 96.9 0.015 3.3E-07 68.3 14.8 190 733-948 106-329 (332)
105 TIGR03192 benz_CoA_bzdQ benzoy 96.7 0.06 1.3E-06 66.0 18.7 219 1477-1746 61-288 (293)
106 PRK10719 eutA reactivating fac 96.7 0.0027 5.8E-08 81.0 7.5 161 1505-1711 88-269 (475)
107 KOG0797|consensus 96.6 0.017 3.6E-07 72.6 12.4 154 1433-1609 162-321 (618)
108 KOG0797|consensus 96.5 0.021 4.6E-07 71.7 13.1 155 637-814 162-322 (618)
109 TIGR02261 benz_CoA_red_D benzo 96.5 0.099 2.2E-06 63.2 18.5 212 1479-1744 37-262 (262)
110 TIGR03286 methan_mark_15 putat 96.4 0.066 1.4E-06 68.0 16.6 176 1537-1745 220-402 (404)
111 COG1924 Activator of 2-hydroxy 96.2 0.15 3.1E-06 63.3 17.6 176 1534-1745 208-389 (396)
112 TIGR02259 benz_CoA_red_A benzo 96.0 0.12 2.6E-06 64.8 15.5 173 1537-1744 249-432 (432)
113 COG1924 Activator of 2-hydroxy 95.9 0.14 3E-06 63.5 15.2 74 872-950 316-390 (396)
114 COG4457 SrfB Uncharacterized p 95.4 1.2 2.6E-05 58.0 21.4 53 900-952 777-848 (1014)
115 TIGR03286 methan_mark_15 putat 95.4 0.14 3E-06 65.2 13.1 71 301-376 331-402 (404)
116 TIGR02261 benz_CoA_red_D benzo 95.2 0.4 8.8E-06 58.1 16.0 72 874-948 187-262 (262)
117 PRK13317 pantothenate kinase; 95.2 0.33 7.1E-06 60.1 15.6 49 901-949 222-273 (277)
118 COG4457 SrfB Uncharacterized p 95.2 1.5 3.2E-05 57.2 21.1 82 291-378 743-847 (1014)
119 TIGR02259 benz_CoA_red_A benzo 95.1 0.18 3.8E-06 63.4 12.7 71 302-375 358-432 (432)
120 PRK13317 pantothenate kinase; 95.0 0.29 6.2E-06 60.6 14.4 49 328-376 222-273 (277)
121 PRK10719 eutA reactivating fac 94.1 0.11 2.3E-06 67.0 7.8 114 110-233 62-183 (475)
122 PF02782 FGGY_C: FGGY family o 94.1 0.077 1.7E-06 62.6 6.1 75 301-377 121-196 (198)
123 KOG0676|consensus 94.0 0.31 6.7E-06 61.8 11.5 208 118-352 82-314 (372)
124 PF02782 FGGY_C: FGGY family o 94.0 0.099 2.1E-06 61.7 6.8 76 873-950 120-196 (198)
125 KOG0676|consensus 93.9 0.75 1.6E-05 58.4 14.4 205 691-925 82-314 (372)
126 TIGR03192 benz_CoA_bzdQ benzoy 93.6 0.16 3.4E-06 62.4 7.6 71 302-377 217-288 (293)
127 COG1069 AraB Ribulose kinase [ 92.6 1.3 2.7E-05 57.9 13.8 184 191-382 269-483 (544)
128 TIGR01315 5C_CHO_kinase FGGY-f 91.8 0.35 7.7E-06 66.2 8.2 85 295-381 410-494 (541)
129 PRK15027 xylulokinase; Provisi 91.4 0.35 7.6E-06 65.4 7.6 62 317-382 378-439 (484)
130 PLN02669 xylulokinase 91.0 0.43 9.3E-06 65.3 7.8 72 303-377 421-492 (556)
131 PF01968 Hydantoinase_A: Hydan 90.9 0.33 7.2E-06 60.7 6.1 68 1672-1742 216-283 (290)
132 PRK15027 xylulokinase; Provisi 90.9 0.49 1.1E-05 64.0 8.2 77 876-953 361-437 (484)
133 TIGR01315 5C_CHO_kinase FGGY-f 90.9 0.58 1.3E-05 64.1 8.9 85 867-953 409-493 (541)
134 PRK11031 guanosine pentaphosph 90.9 2.4 5.1E-05 57.3 14.4 110 1488-1604 62-171 (496)
135 PLN02669 xylulokinase 90.7 0.59 1.3E-05 64.0 8.7 72 876-950 421-492 (556)
136 PF14450 FtsA: Cell division p 90.5 0.67 1.5E-05 50.0 7.2 30 192-221 1-30 (120)
137 COG1069 AraB Ribulose kinase [ 90.4 3.5 7.6E-05 54.0 14.4 183 764-954 269-482 (544)
138 PF01968 Hydantoinase_A: Hydan 89.6 1 2.2E-05 56.5 8.7 66 878-946 218-283 (290)
139 KOG2517|consensus 88.8 3.3 7.2E-05 54.6 12.7 79 301-381 386-465 (516)
140 PF14450 FtsA: Cell division p 88.6 0.96 2.1E-05 48.8 6.6 49 765-813 1-53 (120)
141 TIGR02628 fuculo_kin_coli L-fu 88.6 1.1 2.5E-05 60.2 8.8 76 303-382 367-445 (465)
142 TIGR01311 glycerol_kin glycero 88.1 0.84 1.8E-05 61.9 7.2 53 328-382 399-451 (493)
143 PRK00047 glpK glycerol kinase; 87.9 0.98 2.1E-05 61.4 7.6 78 303-382 377-455 (498)
144 PTZ00294 glycerol kinase-like 87.9 1 2.2E-05 61.3 7.8 78 303-382 380-458 (504)
145 TIGR01311 glycerol_kin glycero 87.8 0.96 2.1E-05 61.4 7.5 78 874-953 371-449 (493)
146 TIGR01312 XylB D-xylulose kina 87.7 1.1 2.4E-05 60.8 7.9 53 328-382 390-442 (481)
147 COG0248 GppA Exopolyphosphatas 87.4 27 0.00058 46.9 19.9 99 110-209 48-148 (492)
148 PRK04123 ribulokinase; Provisi 87.3 1 2.2E-05 62.0 7.3 74 303-381 413-490 (548)
149 KOG2517|consensus 87.2 1.6 3.4E-05 57.5 8.4 79 874-954 386-465 (516)
150 PRK00047 glpK glycerol kinase; 87.1 1.3 2.8E-05 60.2 8.1 78 874-953 375-453 (498)
151 TIGR01234 L-ribulokinase L-rib 87.1 1.2 2.6E-05 61.1 7.8 62 316-382 426-488 (536)
152 TIGR01312 XylB D-xylulose kina 87.0 1.4 3.1E-05 59.6 8.4 79 873-953 361-440 (481)
153 PRK04123 ribulokinase; Provisi 86.8 1.3 2.8E-05 61.0 7.9 77 875-953 412-489 (548)
154 TIGR02628 fuculo_kin_coli L-fu 86.7 1.3 2.8E-05 59.6 7.7 76 874-953 365-443 (465)
155 PRK10331 L-fuculokinase; Provi 86.6 1.2 2.7E-05 59.9 7.4 82 296-382 359-441 (470)
156 TIGR01234 L-ribulokinase L-rib 86.5 1.5 3.3E-05 60.1 8.3 76 876-953 410-486 (536)
157 PTZ00294 glycerol kinase-like 86.4 1.5 3.3E-05 59.6 8.2 77 875-953 379-456 (504)
158 PRK10331 L-fuculokinase; Provi 86.3 1.5 3.2E-05 59.2 7.8 76 876-953 363-439 (470)
159 PLN02295 glycerol kinase 86.0 1.3 2.8E-05 60.4 7.1 77 303-381 381-463 (512)
160 TIGR02627 rhamnulo_kin rhamnul 85.7 1.6 3.4E-05 58.7 7.6 52 328-382 387-438 (454)
161 TIGR01314 gntK_FGGY gluconate 85.5 1.5 3.2E-05 59.7 7.4 52 328-381 401-452 (505)
162 PRK09604 UGMP family protein; 85.4 19 0.00042 46.1 16.8 219 2076-2322 71-311 (332)
163 PF02541 Ppx-GppA: Ppx/GppA ph 85.2 3.7 8E-05 51.5 10.1 112 1486-1604 40-151 (285)
164 PLN02295 glycerol kinase 85.0 1.8 3.9E-05 59.0 7.9 78 874-953 379-462 (512)
165 TIGR02627 rhamnulo_kin rhamnul 84.9 1.8 3.8E-05 58.2 7.6 50 901-953 387-436 (454)
166 TIGR01314 gntK_FGGY gluconate 84.4 2.1 4.5E-05 58.3 8.0 78 874-953 373-451 (505)
167 KOG2531|consensus 84.3 2.5 5.5E-05 53.5 7.7 57 892-950 433-489 (545)
168 KOG0677|consensus 84.3 3.8 8.3E-05 47.9 8.5 222 709-953 101-364 (389)
169 TIGR00555 panK_eukar pantothen 84.2 14 0.0003 45.8 14.0 47 327-373 229-278 (279)
170 TIGR00744 ROK_glcA_fam ROK fam 84.1 37 0.00079 43.3 18.7 113 2033-2150 14-141 (318)
171 PRK10939 autoinducer-2 (AI-2) 83.9 1.8 3.9E-05 59.2 7.1 52 328-381 409-460 (520)
172 PRK10640 rhaB rhamnulokinase; 83.2 2.3 5.1E-05 57.2 7.6 52 328-382 375-426 (471)
173 PRK10854 exopolyphosphatase; P 83.2 5.5 0.00012 54.2 11.2 113 1485-1604 64-176 (513)
174 PRK10939 autoinducer-2 (AI-2) 82.8 2.7 5.7E-05 57.6 8.1 51 901-953 409-459 (520)
175 PRK09557 fructokinase; Reviewe 82.7 44 0.00094 42.3 18.4 92 2054-2149 35-139 (301)
176 PRK10640 rhaB rhamnulokinase; 82.6 2.5 5.5E-05 56.9 7.6 50 901-953 375-424 (471)
177 KOG2531|consensus 82.4 2.9 6.2E-05 53.1 7.2 55 321-377 435-489 (545)
178 TIGR00555 panK_eukar pantothen 81.7 20 0.00043 44.5 14.0 48 899-946 228-278 (279)
179 TIGR00744 ROK_glcA_fam ROK fam 80.5 68 0.0015 40.9 19.2 94 685-780 32-140 (318)
180 KOG0677|consensus 80.1 33 0.00071 40.6 13.9 208 122-352 84-318 (389)
181 PRK11031 guanosine pentaphosph 79.8 8.1 0.00017 52.4 10.8 117 110-234 51-170 (496)
182 COG1070 XylB Sugar (pentulose 79.7 5.2 0.00011 54.4 9.1 80 296-379 371-450 (502)
183 KOG0680|consensus 79.3 21 0.00046 43.7 12.5 207 136-352 93-341 (400)
184 PRK09604 UGMP family protein; 78.6 1.7E+02 0.0036 37.7 21.6 67 1678-1749 240-311 (332)
185 PLN02666 5-oxoprolinase 77.3 13 0.00028 55.1 12.3 75 2238-2315 455-530 (1275)
186 PF07318 DUF1464: Protein of u 77.3 19 0.00041 45.4 11.9 74 1674-1751 241-320 (343)
187 PF02541 Ppx-GppA: Ppx/GppA ph 75.8 14 0.0003 46.4 10.7 116 683-808 31-151 (285)
188 PRK10854 exopolyphosphatase; P 75.7 10 0.00023 51.5 10.1 115 110-234 56-175 (513)
189 TIGR03706 exo_poly_only exopol 74.8 15 0.00033 46.4 10.7 92 1484-1577 52-143 (300)
190 COG1070 XylB Sugar (pentulose 74.3 7.7 0.00017 52.8 8.4 50 901-952 401-450 (502)
191 COG0533 QRI7 Metal-dependent p 73.9 1.6E+02 0.0034 37.5 18.4 156 1558-1742 125-307 (342)
192 PLN02666 5-oxoprolinase 72.7 21 0.00046 53.0 12.5 77 1664-1743 454-531 (1275)
193 KOG0680|consensus 72.0 58 0.0013 40.2 13.5 98 709-812 93-197 (400)
194 PF02543 CmcH_NodU: Carbamoylt 69.4 42 0.00091 43.5 12.9 82 1663-1749 132-216 (360)
195 COG0533 QRI7 Metal-dependent p 68.3 58 0.0012 41.2 13.0 133 2133-2294 127-285 (342)
196 PF01869 BcrAD_BadFG: BadF/Bad 68.3 12 0.00026 46.6 7.6 71 875-948 197-271 (271)
197 PF07318 DUF1464: Protein of u 67.8 48 0.001 42.0 12.3 56 899-954 258-319 (343)
198 COG0248 GppA Exopolyphosphatas 66.7 21 0.00046 47.8 9.6 96 1482-1577 50-147 (492)
199 TIGR03706 exo_poly_only exopol 64.6 44 0.00095 42.3 11.6 94 683-781 45-143 (300)
200 PF01869 BcrAD_BadFG: BadF/Bad 63.4 16 0.00036 45.4 7.5 70 303-375 198-271 (271)
201 PTZ00340 O-sialoglycoprotein e 62.6 2.6E+02 0.0057 36.0 17.7 229 1479-1740 39-307 (345)
202 KOG0681|consensus 61.7 11 0.00024 49.1 5.3 74 868-950 534-614 (645)
203 PTZ00340 O-sialoglycoprotein e 61.0 4.5E+02 0.0097 34.0 19.3 209 684-926 40-288 (345)
204 KOG2708|consensus 60.8 57 0.0012 38.1 10.1 128 2139-2294 131-278 (336)
205 KOG0681|consensus 60.0 8.4 0.00018 50.0 3.9 66 312-377 540-614 (645)
206 PRK13310 N-acetyl-D-glucosamin 58.1 2.5E+02 0.0054 35.5 16.9 87 2053-2142 34-133 (303)
207 PF03702 UPF0075: Uncharacteri 57.8 25 0.00055 45.3 7.7 75 873-950 259-337 (364)
208 COG0145 HyuA N-methylhydantoin 57.0 9.8 0.00021 52.8 4.1 52 2097-2150 244-296 (674)
209 COG3426 Butyrate kinase [Energ 56.0 83 0.0018 38.3 10.7 50 324-373 292-344 (358)
210 COG3426 Butyrate kinase [Energ 55.4 91 0.002 38.0 10.9 49 897-945 292-343 (358)
211 TIGR03281 methan_mark_12 putat 54.9 46 0.001 41.2 8.7 50 2270-2322 262-314 (326)
212 TIGR03723 bact_gcp putative gl 53.7 1.7E+02 0.0036 37.5 14.1 60 1678-1742 245-309 (314)
213 PRK09557 fructokinase; Reviewe 53.1 5.3E+02 0.012 32.5 18.7 44 735-780 96-139 (301)
214 PRK14878 UGMP family protein; 52.9 2.8E+02 0.006 35.6 16.0 42 901-942 241-287 (323)
215 COG0554 GlpK Glycerol kinase [ 52.3 32 0.00069 45.0 7.1 76 301-381 374-453 (499)
216 COG2377 Predicted molecular ch 52.0 1.8E+02 0.0039 37.3 13.3 166 762-951 162-344 (371)
217 KOG2708|consensus 51.9 1.3E+02 0.0027 35.4 10.9 131 1596-1742 149-300 (336)
218 TIGR03281 methan_mark_12 putat 50.8 67 0.0014 39.8 9.1 51 1698-1751 263-316 (326)
219 PF06277 EutA: Ethanolamine ut 50.6 47 0.001 43.7 8.4 86 1508-1599 88-177 (473)
220 PF03702 UPF0075: Uncharacteri 50.2 38 0.00083 43.8 7.6 74 301-377 260-337 (364)
221 PRK14878 UGMP family protein; 50.1 3.4E+02 0.0073 34.9 16.1 41 1676-1721 225-265 (323)
222 COG0554 GlpK Glycerol kinase [ 48.9 44 0.00096 43.7 7.7 76 874-954 374-453 (499)
223 PRK09605 bifunctional UGMP fam 48.5 7.4E+02 0.016 34.2 20.3 69 1676-1749 229-302 (535)
224 PF13941 MutL: MutL protein 47.9 18 0.00039 47.8 4.2 30 1694-1723 382-412 (457)
225 COG0145 HyuA N-methylhydantoin 46.6 26 0.00057 48.7 5.7 86 1482-1577 211-296 (674)
226 TIGR03722 arch_KAE1 universal 46.1 7.6E+02 0.016 31.7 18.5 57 1678-1739 228-289 (322)
227 PF08735 DUF1786: Putative pyr 45.3 79 0.0017 38.5 8.6 103 109-219 88-194 (254)
228 PRK09698 D-allose kinase; Prov 44.1 7.6E+02 0.016 31.1 18.6 87 2059-2149 44-146 (302)
229 PRK09585 anmK anhydro-N-acetyl 43.7 82 0.0018 40.7 9.1 72 875-950 263-338 (365)
230 PF06277 EutA: Ethanolamine ut 43.7 53 0.0012 43.3 7.4 116 110-231 59-178 (473)
231 TIGR00329 gcp_kae1 metallohydr 42.7 5.6E+02 0.012 32.6 16.3 43 1676-1723 242-284 (305)
232 COG2192 Predicted carbamoyl tr 41.9 8.1E+02 0.018 33.3 17.4 83 1663-1750 255-339 (555)
233 smart00842 FtsA Cell division 41.6 96 0.0021 36.3 8.7 30 150-179 157-186 (187)
234 PF00349 Hexokinase_1: Hexokin 41.4 59 0.0013 38.7 6.8 55 2130-2186 61-118 (206)
235 PRK00976 hypothetical protein; 41.0 68 0.0015 40.6 7.5 51 1697-1750 263-315 (326)
236 TIGR03723 bact_gcp putative gl 40.6 6.3E+02 0.014 32.3 16.3 46 2269-2314 258-308 (314)
237 PF14574 DUF4445: Domain of un 40.5 2.3E+02 0.005 37.4 12.5 48 1668-1715 54-101 (412)
238 cd06007 R3H_DEXH_helicase R3H 40.4 65 0.0014 30.3 5.4 41 2067-2109 5-45 (59)
239 PRK00976 hypothetical protein; 40.1 77 0.0017 40.1 7.7 50 2270-2322 263-314 (326)
240 PF03630 Fumble: Fumble ; Int 37.9 2.4E+02 0.0051 36.4 11.8 72 1670-1743 261-339 (341)
241 TIGR00067 glut_race glutamate 37.8 6.4E+02 0.014 31.1 15.2 40 2270-2313 172-211 (251)
242 COG2377 Predicted molecular ch 37.3 3.3E+02 0.0072 35.0 12.4 184 2115-2319 148-343 (371)
243 PRK03011 butyrate kinase; Prov 36.3 68 0.0015 41.6 6.8 47 901-947 295-344 (358)
244 PF14574 DUF4445: Domain of un 35.5 1.5E+02 0.0033 39.1 9.7 104 2135-2294 4-107 (412)
245 PRK09585 anmK anhydro-N-acetyl 35.3 1.2E+02 0.0026 39.4 8.6 67 307-377 268-338 (365)
246 PLN02920 pantothenate kinase 1 35.2 3.9E+02 0.0084 34.9 12.8 49 327-375 296-350 (398)
247 TIGR03123 one_C_unchar_1 proba 35.2 24 0.00052 44.6 2.4 51 2237-2295 245-299 (318)
248 TIGR00329 gcp_kae1 metallohydr 35.2 2.6E+02 0.0057 35.5 11.7 26 2269-2294 257-282 (305)
249 TIGR03722 arch_KAE1 universal 34.5 9.1E+02 0.02 30.9 16.5 42 329-370 243-289 (322)
250 PRK07058 acetate kinase; Provi 34.1 3.6E+02 0.0078 35.3 12.4 46 877-926 298-344 (396)
251 TIGR00143 hypF [NiFe] hydrogen 33.8 47 0.001 46.9 5.1 64 1676-1744 642-710 (711)
252 PRK03011 butyrate kinase; Prov 33.6 60 0.0013 42.0 5.7 46 328-373 295-343 (358)
253 PRK09605 bifunctional UGMP fam 33.3 1E+03 0.022 32.9 17.9 79 2243-2322 219-302 (535)
254 cd02640 R3H_NRF R3H domain of 33.1 1.1E+02 0.0023 29.0 5.6 43 2066-2109 4-46 (60)
255 COG3894 Uncharacterized metal- 32.3 93 0.002 40.8 6.7 46 2132-2177 164-209 (614)
256 PLN02920 pantothenate kinase 1 32.0 2.1E+02 0.0045 37.3 9.7 73 1670-1744 271-350 (398)
257 PF02543 CmcH_NodU: Carbamoylt 31.5 1.1E+02 0.0023 39.9 7.5 82 867-953 132-216 (360)
258 COG2192 Predicted carbamoyl tr 31.2 1E+03 0.022 32.5 15.8 82 868-953 256-338 (555)
259 PF14628 DUF4454: Domain of un 30.6 1.1E+02 0.0023 35.2 6.1 83 2079-2166 52-143 (216)
260 cd06007 R3H_DEXH_helicase R3H 30.3 1.2E+02 0.0025 28.7 5.3 38 127-166 7-44 (59)
261 TIGR00143 hypF [NiFe] hydrogen 29.9 71 0.0015 45.2 5.8 61 884-949 646-711 (711)
262 PF02801 Ketoacyl-synt_C: Beta 29.4 60 0.0013 34.9 4.0 45 2253-2297 27-73 (119)
263 PRK09698 D-allose kinase; Prov 29.3 1.2E+03 0.027 29.2 20.6 45 1530-1577 103-147 (302)
264 PF00349 Hexokinase_1: Hexokin 28.8 1.3E+02 0.0028 35.9 6.9 55 761-817 61-118 (206)
265 TIGR03123 one_C_unchar_1 proba 27.9 51 0.0011 41.7 3.6 19 763-781 128-146 (318)
266 COG4012 Uncharacterized protei 27.8 1.6E+02 0.0036 35.4 7.2 58 142-208 185-245 (342)
267 COG5026 Hexokinase [Carbohydra 27.5 2E+02 0.0043 37.6 8.4 28 2130-2158 73-101 (466)
268 cd02646 R3H_G-patch R3H domain 26.9 1.2E+02 0.0026 28.4 4.9 42 2064-2108 2-43 (58)
269 KOG1939|consensus 25.8 42 0.00092 45.5 2.4 38 2110-2147 282-320 (1247)
270 PRK07058 acetate kinase; Provi 25.4 5.1E+02 0.011 34.0 11.7 42 308-353 302-344 (396)
271 COG2441 Predicted butyrate kin 24.0 3.6E+02 0.0079 32.9 9.1 152 1559-1751 163-337 (374)
272 PF00480 ROK: ROK family; Int 23.9 2.8E+02 0.006 31.9 8.5 111 2031-2149 11-134 (179)
273 cd00327 cond_enzymes Condensin 23.2 1.9E+02 0.0041 35.3 7.4 66 2252-2318 10-78 (254)
274 cd02641 R3H_Smubp-2_like R3H d 23.0 1.9E+02 0.0041 27.3 5.4 42 2066-2108 4-45 (60)
275 cd02640 R3H_NRF R3H domain of 22.9 2.1E+02 0.0046 27.1 5.7 41 125-166 5-45 (60)
276 PRK00180 acetate kinase A/prop 22.3 3.7E+02 0.008 35.4 9.8 47 877-926 302-349 (402)
277 PF00480 ROK: ROK family; Int 22.1 9.3E+02 0.02 27.5 12.5 95 1480-1581 30-137 (179)
278 COG3894 Uncharacterized metal- 21.9 3.3E+02 0.0072 36.1 8.8 44 1562-1605 167-210 (614)
279 PTZ00288 glucokinase 1; Provis 21.0 4.8E+02 0.01 34.6 10.5 257 2035-2321 49-392 (405)
280 COG4819 EutA Ethanolamine util 20.3 1.7E+02 0.0038 36.3 5.7 86 1508-1599 90-179 (473)
281 TIGR00016 ackA acetate kinase. 20.2 6.5E+02 0.014 33.2 11.2 46 878-926 307-353 (404)
282 KOG1385|consensus 20.1 79 0.0017 40.6 3.0 32 2120-2151 200-232 (453)
283 PLN02377 3-ketoacyl-CoA syntha 20.0 2E+02 0.0044 39.0 7.0 67 2251-2317 174-243 (502)
No 1
>KOG0100|consensus
Probab=100.00 E-value=7.9e-149 Score=1272.11 Aligned_cols=574 Identities=60% Similarity=0.966 Sum_probs=559.9
Q ss_pred CCCCCCCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEEecCCCceEEEEEc-CceeeeChhhhH
Q psy7639 1981 GASAGDMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFK-GERKTFAPEEIS 2059 (2568)
Q Consensus 1981 ~~~~~~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~~~~~~~~~~v~~~-~~~~~~~peei~ 2059 (2568)
.++.+++|++|++||+|+..||+|||+++||||||+|+|+.||+++++|||+|++++++|.++|..+ |+.+.|+|||||
T Consensus 74 VaFt~derLiGdAAKNQ~~~NPenTiFD~KRLIGr~~~d~~vq~Dik~~Pfkvv~k~~kp~i~v~v~~g~~K~FtPeEiS 153 (663)
T KOG0100|consen 74 VAFTDDERLIGDAAKNQLTSNPENTIFDAKRLIGRKFNDKSVQKDIKFLPFKVVNKDGKPYIQVKVGGGETKVFTPEEIS 153 (663)
T ss_pred eeeccchhhhhhHhhcccccCcccceechHHHhCcccCChhhhhhhhcCceEEEcCCCCccEEEEccCCcccccCHHHHH
Confidence 3677889999999999999999999999999999999999999999999999999999999999987 568899999999
Q ss_pred HHHHHHHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEee
Q psy7639 2060 SMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDL 2139 (2568)
Q Consensus 2060 a~iL~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~Dl 2139 (2568)
||||.+||++||+|||.+|++||+||||||||+|||||+||+.||||||+||||||||||+|||++++ ..+++||||||
T Consensus 154 aMiL~KMKe~AEayLGkkv~~AVvTvPAYFNDAQrQATKDAGtIAgLnV~RIiNePTaAAIAYGLDKk-~gEknilVfDL 232 (663)
T KOG0100|consen 154 AMILTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKK-DGEKNILVFDL 232 (663)
T ss_pred HHHHHHHHHHHHHHhCCcccceEEecchhcchHHHhhhcccceeccceEEEeecCccHHHHHhccccc-CCcceEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999987 46899999999
Q ss_pred CCeeeEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcce
Q psy7639 2140 GGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTE 2219 (2568)
Q Consensus 2140 Gggt~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~ 2219 (2568)
||||||||+|.+++| +|+|+||+||+||||+|||+++++||++-+++|++.|++.|.||+++|+.+||+||+.||++.+
T Consensus 233 GGGTFDVSlLtIdnG-VFeVlaTnGDThLGGEDFD~rvm~~fiklykkK~gkDv~kdnkA~~KLrRe~EkAKRaLSsqhq 311 (663)
T KOG0100|consen 233 GGGTFDVSLLTIDNG-VFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKHGKDVRKDNKAVQKLRREVEKAKRALSSQHQ 311 (663)
T ss_pred CCceEEEEEEEEcCc-eEEEEecCCCcccCccchHHHHHHHHHHHHhhhcCCccchhhHHHHHHHHHHHHHHhhhccccc
Confidence 999999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCC
Q psy7639 2220 ASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSL 2299 (2568)
Q Consensus 2220 ~~~~i~~~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~ 2299 (2568)
+.|+|++|++|.||+-++||++||+|+.+||+.++.|++++|++++|.++|||+|+|||||||||+||++|++||+|+++
T Consensus 312 ~riEIeS~fdG~DfSEtLtRAkFEElNmDLFr~TlkPv~kvl~Ds~lkKsdideiVLVGGsTrIPKvQqllk~fF~GKep 391 (663)
T KOG0100|consen 312 VRIEIESLFDGVDFSETLTRAKFEELNMDLFRKTLKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKVQQLLKDFFNGKEP 391 (663)
T ss_pred eEEeeeeccccccccchhhhhHHHHhhhHHHHHhhHHHHHHHhhcCcccccCceEEEecCcccChhHHHHHHHHhCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEE
Q psy7639 2300 NLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVT 2379 (2568)
Q Consensus 2300 ~~~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~ 2379 (2568)
++.+|||||||+|||+||+.|||+ ....+++|+||+|+++|||+.||+|++||||||.||+++++.|+|+.|||+.|.
T Consensus 392 skGinPdEAVAYGAAVQaGvlsGe--e~t~divLLDv~pLtlGIETvGGVMTklI~RNTviPTkKSQvFsTa~DnQ~tV~ 469 (663)
T KOG0100|consen 392 SKGINPDEAVAYGAAVQAGVLSGE--EDTGDIVLLDVNPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAQDNQPTVT 469 (663)
T ss_pred cCCCChHHHHHhhhhhhhcccccc--cCcCcEEEEeeccccceeeeecceeeccccCCcccCccccceeeecccCCceEE
Confidence 999999999999999999999994 578899999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHH
Q psy7639 2380 IQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMI 2459 (2568)
Q Consensus 2380 i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~ 2459 (2568)
|+||+|||++.+||++||+|.|+||||+|+|+|+|+|||++|+||||+|+|.|+.||++++|+|+++.++||+|+|++|+
T Consensus 470 I~vyEGER~mtkdn~lLGkFdltGipPAPRGvpqIEVtFevDangiL~VsAeDKgtg~~~kitItNd~~rLt~EdIerMv 549 (663)
T KOG0100|consen 470 IQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEVDANGILQVSAEDKGTGKKEKITITNDKGRLTPEDIERMV 549 (663)
T ss_pred EEEeeccccccccccccccccccCCCCCCCCCccEEEEEEEccCceEEEEeeccCCCCcceEEEecCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhhhcc---CCCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHH
Q psy7639 2460 NDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAG---NKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQ 2536 (2568)
Q Consensus 2460 ~~~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~~~~---~~l~~~ek~~i~~~l~e~~~WL~~~~~a~~ee~~~k~~~ 2536 (2568)
.++++|+++|++.++++++||+||+|.|++++.+.+.. .+++++++++++.+++++.+||+.|++|++|+|++++++
T Consensus 550 ~eAekFAeeDk~~KekieaRN~LE~YayslKnqi~dkekLg~Kl~~edKe~~e~av~e~~eWL~~n~~a~~Ee~~ek~ke 629 (663)
T KOG0100|consen 550 NEAEKFAEEDKKLKEKIEARNELESYAYSLKNQIGDKEKLGGKLSDEDKETIEDAVEEALEWLESNQDASKEEFKEKKKE 629 (663)
T ss_pred HHHHHHhhhhHHHHHHHHhHHHHHHHHHHhhhccCchhHhcccCChhHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHH
Confidence 99999999999999999999999999999999997643 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCC
Q psy7639 2537 LQKSCMPLMSKMHGGASAGDMP 2558 (2568)
Q Consensus 2537 L~~~~~pi~~r~~e~~g~~~~~ 2558 (2568)
|+.+|+||++++|+.+|++|.+
T Consensus 630 le~vv~PiisklY~~ag~~~~~ 651 (663)
T KOG0100|consen 630 LEAVVQPIISKLYGGAGGAPEP 651 (663)
T ss_pred HHHHHHHHHHHHhhhcCCCCCC
Confidence 9999999999999876655543
No 2
>KOG0100|consensus
Probab=100.00 E-value=1.1e-134 Score=1155.87 Aligned_cols=602 Identities=58% Similarity=0.934 Sum_probs=585.4
Q ss_pred HHHhcccccEEEEEEcccccc--cccCCcccccccccc---hhhhhHHHHhhhcCCCccccccccccccccCChhhhhcc
Q psy7639 1379 KERISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRC---REECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDM 1453 (2568)
Q Consensus 1379 ~~~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~---~~~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~~ 1453 (2568)
...||||.||++++.|+..++ |++|||+|||+|+|+ +.+|++|++|+..||+||+++.||+|||.|+|+.+|+++
T Consensus 40 gIdLGTTYsCVgV~kNgrvEIiANdQGNRItPSyVaFt~derLiGdAAKNQ~~~NPenTiFD~KRLIGr~~~d~~vq~Di 119 (663)
T KOG0100|consen 40 GIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFTDDERLIGDAAKNQLTSNPENTIFDAKRLIGRKFNDKSVQKDI 119 (663)
T ss_pred EEecCCceeeEEEEeCCeEEEEecCCCCccccceeeeccchhhhhhHhhcccccCcccceechHHHhCcccCChhhhhhh
Confidence 345999999999999999888 999999999999995 447999999999999999999999999999999999999
Q ss_pred cccccEEeeCCCCCceeEEec-CCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcC
Q psy7639 1454 KHWPFTVVNDCSKPKIQVEFK-GERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAG 1532 (2568)
Q Consensus 1454 k~~~~~~~~~~~~~~~~v~~~-~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AG 1532 (2568)
|+|||+++..+++|+++|.+. +..+.|+|+||+||+|.+||+.||.|||.+++++|+|||||||++|||++++|+.+||
T Consensus 120 k~~Pfkvv~k~~kp~i~v~v~~g~~K~FtPeEiSaMiL~KMKe~AEayLGkkv~~AVvTvPAYFNDAQrQATKDAGtIAg 199 (663)
T KOG0100|consen 120 KFLPFKVVNKDGKPYIQVKVGGGETKVFTPEEISAMILTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAG 199 (663)
T ss_pred hcCceEEEcCCCCccEEEEccCCcccccCHHHHHHHHHHHHHHHHHHHhCCcccceEEecchhcchHHHhhhcccceecc
Confidence 999999999999999999998 4588999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHH
Q psy7639 1533 LNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 1612 (2568)
Q Consensus 1533 L~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~ 1612 (2568)
|+|+||||||||||++|++++.. .++++||||+||||||||++.+++| +|+|++++||++|||+|||.++++||.+-+
T Consensus 200 LnV~RIiNePTaAAIAYGLDKk~-gEknilVfDLGGGTFDVSlLtIdnG-VFeVlaTnGDThLGGEDFD~rvm~~fikly 277 (663)
T KOG0100|consen 200 LNVVRIINEPTAAAIAYGLDKKD-GEKNILVFDLGGGTFDVSLLTIDNG-VFEVLATNGDTHLGGEDFDQRVMEYFIKLY 277 (663)
T ss_pred ceEEEeecCccHHHHHhcccccC-CcceEEEEEcCCceEEEEEEEEcCc-eEEEEecCCCcccCccchHHHHHHHHHHHH
Confidence 99999999999999999998854 5789999999999999999999888 999999999999999999999999999999
Q ss_pred HhhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHHcC
Q psy7639 1613 KRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAK 1692 (2568)
Q Consensus 1613 ~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~a~ 1692 (2568)
+++++.|++.+.+++++|+++||+||+.||+..++.|.|+++.+|.||+.++||+.||++..++|.+++.|++++|++++
T Consensus 278 kkK~gkDv~kdnkA~~KLrRe~EkAKRaLSsqhq~riEIeS~fdG~DfSEtLtRAkFEElNmDLFr~TlkPv~kvl~Ds~ 357 (663)
T KOG0100|consen 278 KKKHGKDVRKDNKAVQKLRREVEKAKRALSSQHQVRIEIESLFDGVDFSETLTRAKFEELNMDLFRKTLKPVQKVLEDSD 357 (663)
T ss_pred hhhcCCccchhhHHHHHHHHHHHHHHhhhccccceEEeeeeccccccccchhhhhHHHHhhhHHHHHhhHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeecccccceee
Q psy7639 1693 LDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIET 1772 (2568)
Q Consensus 1693 ~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slGie~ 1772 (2568)
+.+++||.|+|||||+|+|.||++|+++|+++.++..+||+||||+|||+||++++|.. ...+++|+||+|+|+|||+
T Consensus 358 lkKsdideiVLVGGsTrIPKvQqllk~fF~GKepskGinPdEAVAYGAAVQaGvlsGee--~t~divLLDv~pLtlGIET 435 (663)
T KOG0100|consen 358 LKKSDIDEIVLVGGSTRIPKVQQLLKDFFNGKEPSKGINPDEAVAYGAAVQAGVLSGEE--DTGDIVLLDVNPLTLGIET 435 (663)
T ss_pred cccccCceEEEecCcccChhHHHHHHHHhCCCCccCCCChHHHHHhhhhhhhccccccc--CcCcEEEEeeccccceeee
Confidence 99999999999999999999999999999999999999999999999999999999975 5679999999999999999
Q ss_pred cCcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcCCee
Q psy7639 1773 AGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGI 1852 (2568)
Q Consensus 1773 ~~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~nGi 1852 (2568)
.||.|+++|||||.||+++++.|+|+.|||+.+.|.||+||++|.++|++||+|.|+||||+|+|+|+|+|||++|.|||
T Consensus 436 vGGVMTklI~RNTviPTkKSQvFsTa~DnQ~tV~I~vyEGER~mtkdn~lLGkFdltGipPAPRGvpqIEVtFevDangi 515 (663)
T KOG0100|consen 436 VGGVMTKLIPRNTVIPTKKSQVFSTAQDNQPTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEVDANGI 515 (663)
T ss_pred ecceeeccccCCcccCccccceeeecccCCceEEEEEeeccccccccccccccccccCCCCCCCCCccEEEEEEEccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhcCCCCH
Q psy7639 1853 LNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALD---NAGNKLTE 1929 (2568)
Q Consensus 1853 L~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~---~~~~~~~~ 1929 (2568)
|+|+|.|+.||++.+|+|+|+.++||.|+|++|+++|++|+++|+..++++++||.||+|.|++++.+. .++.++++
T Consensus 516 L~VsAeDKgtg~~~kitItNd~~rLt~EdIerMv~eAekFAeeDk~~KekieaRN~LE~YayslKnqi~dkekLg~Kl~~ 595 (663)
T KOG0100|consen 516 LQVSAEDKGTGKKEKITITNDKGRLTPEDIERMVNEAEKFAEEDKKLKEKIEARNELESYAYSLKNQIGDKEKLGGKLSD 595 (663)
T ss_pred EEEEeeccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHHhhhccCchhHhcccCCh
Confidence 999999999999999999999999999999999999999999999999999999999999999999993 47899999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhcccccccCCCCCCCC
Q psy7639 1930 SEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGGASA 1984 (2568)
Q Consensus 1930 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~ 1984 (2568)
++++.+..++++..+||+.|+.+++|+|+++.++|+.+|.||.+++|+++|++..
T Consensus 596 edKe~~e~av~e~~eWL~~n~~a~~Ee~~ek~kele~vv~PiisklY~~ag~~~~ 650 (663)
T KOG0100|consen 596 EDKETIEDAVEEALEWLESNQDASKEEFKEKKKELEAVVQPIISKLYGGAGGAPE 650 (663)
T ss_pred hHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCC
Confidence 9999999999999999999999999999999999999999999999998876644
No 3
>KOG0101|consensus
Probab=100.00 E-value=1.2e-112 Score=1072.71 Aligned_cols=570 Identities=71% Similarity=1.088 Sum_probs=557.6
Q ss_pred CCCCCCCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEE-ecCCCceEEEEEcCceeeeChhhhH
Q psy7639 1981 GASAGDMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVV-NDCSKPKIQVEFKGERKTFAPEEIS 2059 (2568)
Q Consensus 1981 ~~~~~~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~-~~~~~~~~~v~~~~~~~~~~peei~ 2059 (2568)
-++.++++++|.+|++|..+||.||++++||||||.|+||.+|.++++|||.|. +.++.+.+++.+.++.+.|+|++++
T Consensus 45 vaf~~~e~~vg~~a~~qv~~np~ntv~~~krliGr~f~d~~v~~~~k~~pf~V~~~~~~~~~i~~~~~~~~~~f~peeis 124 (620)
T KOG0101|consen 45 VAFTDTERLIGDAAKNQVARNPDNTVFDAKRLIGRFFDDPEVQSDMKLWPFKVISDQGGKPKIQVTYKGETKSFNPEEIS 124 (620)
T ss_pred eeecccccchhhhhhhhhhcCCcceeeehhhhcCccccchhhHhHhhcCCcccccccCCcceEEecccccceeeeeeeee
Confidence 355667899999999999999999999999999999999999999999999999 5566899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEee
Q psy7639 2060 SMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDL 2139 (2568)
Q Consensus 2060 a~iL~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~Dl 2139 (2568)
+|+|.+||+.|++|||.+|.+||||||+||++.||+||++||.+|||+|+||||||||||||||++++.....+|||||+
T Consensus 125 s~~L~klke~Ae~~Lg~~v~~aviTVPa~F~~~Qr~at~~A~~iaGl~vlrii~EPtAaalAygl~k~~~~~~~VlI~Dl 204 (620)
T KOG0101|consen 125 SMVLTKLKETAEAYLGKTVKKAVVTVPAYFNDSQRAATKDAALIAGLNVLRIINEPTAAALAYGLDKKVLGERNVLIFDL 204 (620)
T ss_pred ehhccccHHHHHHHhcCceeeEEEEecCCcCHHHHHHHHHHHHhcCCceeeeecchHHHHHHhhccccccceeeEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999988667899999999
Q ss_pred CCeeeEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcce
Q psy7639 2140 GGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTE 2219 (2568)
Q Consensus 2140 Gggt~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~ 2219 (2568)
||||||||++.+.+| .++|++++||+||||+|||++|+.||+.+|++|++.|++.|+++++||+.+||++|+.||+.++
T Consensus 205 Gggtfdvs~l~i~gG-~~~vkat~gd~~lGGedf~~~l~~h~~~ef~~k~~~d~~~n~r~l~rLR~a~E~aKr~LS~~~~ 283 (620)
T KOG0101|consen 205 GGGTFDVSVLSLEGG-IFEVKATAGDTHLGGEDFDNKLVNHFAAEFKRKAGKDIGGNARALRRLRTACERAKRTLSSSTQ 283 (620)
T ss_pred CCCceeeeeEEeccc-hhhhhhhcccccccchhhhHHHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHhhhccccc
Confidence 999999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCC
Q psy7639 2220 ASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSL 2299 (2568)
Q Consensus 2220 ~~~~i~~~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~ 2299 (2568)
+++.+++|++|.||..+|||++||++|.+||.+|+++++++|+++++++.+|++|+|||||||||++|++|+++|+++++
T Consensus 284 ~~i~vdsL~~g~d~~~~itrarfe~l~~dlf~~~~~~v~~~L~da~~dk~~i~~vvlVGGstriPk~~~ll~d~f~~k~~ 363 (620)
T KOG0101|consen 284 ASIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALKDAKLDKSDIDEVVLVGGSTRIPKVQKLLEDFFNGKEL 363 (620)
T ss_pred ceeccchhhccccccceeehhhhhhhhhHHHHHHHHHHHHHHHhhccCccCCceeEEecCcccchHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEE
Q psy7639 2300 NLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVT 2379 (2568)
Q Consensus 2300 ~~~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~ 2379 (2568)
..++||||+||+|||+|||.++|.....+.++++.|++|+|+||++.+|.|+++|+|||++|++++++|+|+.|||+.|.
T Consensus 364 ~~sinpDeavA~GAavqaa~~~g~~~~~~~~l~lid~~pl~~gve~a~~~~~~~i~~~t~~P~~k~~~ftt~~dnQp~V~ 443 (620)
T KOG0101|consen 364 NKSINPDEAVAYGAAVQAAILSGDKSLNIQDLLLIDVAPLSLGVETAGGVFTVLIPRNTSIPTKKTQTFTTYSDNQPGVL 443 (620)
T ss_pred ccCCCHHHHHHhhHHHHhhhccCCccccccceeeeecccccccccccCCcceeeeecccccceeeeeeeeeecCCCCcee
Confidence 99999999999999999999999888888999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHH
Q psy7639 2380 IQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMI 2459 (2568)
Q Consensus 2380 i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~ 2459 (2568)
|.|||||+.+++||++||.|+|+||||+|+|+|+|+|+|++|.||||+|+|++++|||...++|++..++||+++|++|.
T Consensus 444 I~VyEger~~~kdn~~lg~feL~gippaprgvp~IevtfdiD~ngiL~Vta~d~stgK~~~i~i~n~~grls~~~Ierm~ 523 (620)
T KOG0101|consen 444 IQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVTAVDKSTGKENKITITNDKGRLSKEEIERMV 523 (620)
T ss_pred EEEEeccccccccccccceeeecCCCccccCCcceeEEEecCCCcEEEEeeccccCCccceEEEecccceeehhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHH
Q psy7639 2460 NDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQK 2539 (2568)
Q Consensus 2460 ~~~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~~~~~~l~~~ek~~i~~~l~e~~~WL~~~~~a~~ee~~~k~~~L~~ 2539 (2568)
.+++.+..+|+..++++.++|+||+|+|+++..+++..++++++++.++.++|+++..||+.++.+.+++|++|.++|+.
T Consensus 524 ~ea~~~~~~d~~~~~~v~~~~~le~~~f~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~wl~~~~~~~~~e~e~k~~el~~ 603 (620)
T KOG0101|consen 524 QEAEKYKAEDEKQKDKVAAKNSLESYAFNMKATVEDEKGKINEEDKQKILDKCNEVINWLDKNQLAEKEEFEHKQKELEL 603 (620)
T ss_pred hhhhhccccCHHHHHHHHHHhhHHHHHHhhhhhhhhhccccChhhhhhHHHHHHHHHHHhhhcccccccHHHHHHHHHHh
Confidence 99999999999999999999999999999999999877899999999999999999999999998899999999999999
Q ss_pred HHHHHHHHHhcC
Q psy7639 2540 SCMPLMSKMHGG 2551 (2568)
Q Consensus 2540 ~~~pi~~r~~e~ 2551 (2568)
.|.||+.+++++
T Consensus 604 ~~~p~~~~~~~~ 615 (620)
T KOG0101|consen 604 VCNPIISKLYQG 615 (620)
T ss_pred hccHHHHhhhcc
Confidence 999999999865
No 4
>KOG0102|consensus
Probab=100.00 E-value=3.5e-109 Score=988.04 Aligned_cols=555 Identities=51% Similarity=0.816 Sum_probs=533.4
Q ss_pred CCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEEe-cCCCceEEEEEcCceeeeChhhhHHHHHH
Q psy7639 1986 DMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DCSKPKIQVEFKGERKTFAPEEISSMVLT 2064 (2568)
Q Consensus 1986 ~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~peei~a~iL~ 2064 (2568)
+++|||..|++|...||.||++.-||||||+|+||++|.+++..||+++. .+|..+++. .| +.|+|.++.+|+|.
T Consensus 71 ge~Lvg~~akrqav~n~~ntffatKrligRrf~d~evq~~~k~vpyKiVk~~ngdaw~e~--~G--~~~spsqig~~vl~ 146 (640)
T KOG0102|consen 71 GERLVGMPAKRQAVTNPENTFFATKRLIGRRFDDPEVQKDIKQVPYKIVKASNGDAWVEA--RG--KQYSPSQIGAFVLM 146 (640)
T ss_pred ccEEecchhhhhhccCCCceEEEehhhhhhhccCHHHHHHHHhCCcceEEccCCcEEEEe--CC--eEecHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999994 677766665 44 89999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCeee
Q psy7639 2065 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTF 2144 (2568)
Q Consensus 2065 ~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt~ 2144 (2568)
+||+.|++|+|.+|+++||||||||||.||+||++|++||||+|+|+|||||||||+||++++. +..++|||||||||
T Consensus 147 kmk~tae~yl~~~v~~avvtvpAyfndsqRqaTkdag~iagl~vlrvineptaaalaygld~k~--~g~iaV~dLgggtf 224 (640)
T KOG0102|consen 147 KMKETAEAYLGKKVKNAVITVPAYFNDSQRQATKDAGQIAGLNVLRVINEPTAAALAYGLDKKE--DGVIAVFDLGGGTF 224 (640)
T ss_pred HHHHHHHHHcCchhhheeeccHHHHhHHHHHHhHhhhhhccceeeccCCccchhHHhhcccccC--CCceEEEEcCCcee
Confidence 9999999999999999999999999999999999999999999999999999999999999873 68899999999999
Q ss_pred EEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcceeEEEE
Q psy7639 2145 DVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEI 2224 (2568)
Q Consensus 2145 dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~~~i 2224 (2568)
|+||+.+.+| +|+|++|.||+||||+|||..+++|++.+|++..++|+..|.+|++||+++||+||..||+..+..+++
T Consensus 225 disilei~~g-vfevksTngdtflggedfd~~~~~~~v~~fk~~~gidl~kd~~a~qrl~eaaEkaKielSs~~~tei~l 303 (640)
T KOG0102|consen 225 DISILEIEDG-VFEVKSTNGDTHLGGEDFDNALVRFIVSEFKKEEGIDLTKDRMALQRLREAAEKAKIELSSRQQTEINL 303 (640)
T ss_pred eeeeehhccc-eeEEEeccCccccChhHHHHHHHHHHHHhhhcccCcchhhhHHHHHHHHHHHHhhhhhhhhcccceecc
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCC----cceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCCC
Q psy7639 2225 DALYDG----IDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLN 2300 (2568)
Q Consensus 2225 ~~~~~~----~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~ 2300 (2568)
+.+..+ .++++++||++||+++.+|++|+++||+++|++|++..+||++|+||||+||||+||+.|.+.| |+.++
T Consensus 304 p~iTada~gpkh~~i~~tr~efe~~v~~lI~Rti~p~~~aL~dA~~~~~di~EV~lvggmtrmpkv~s~V~e~f-gk~p~ 382 (640)
T KOG0102|consen 304 PFITADASGPKHLNIELTRGEFEELVPSLIARTIEPCKKALRDASLSSSDINEVILVGGMTRMPKVQSTVKELF-GKGPS 382 (640)
T ss_pred ceeeccCCCCeeEEEeecHHHHHHhhHHHHHhhhhHHHHHHHhccCChhhhhhhhhhcchhhcHHHHHHHHHHh-CCCCC
Confidence 999877 6899999999999999999999999999999999999999999999999999999999999999 78999
Q ss_pred CCCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEEE
Q psy7639 2301 LSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTI 2380 (2568)
Q Consensus 2301 ~~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~i 2380 (2568)
.++||||+||.|||+|++.|+| .|++++|+||+|++||||+.||.|++||||||+||+++++.|+|..|+|+.|.|
T Consensus 383 ~~vnPdeava~GAaiqggvl~g----eVkdvlLLdVtpLsLgietlggvft~Li~rnttIptkksqvfstaadgqt~V~i 458 (640)
T KOG0102|consen 383 KGVNPDEAVAGGAAIQGGVLSG----EVKDVLLLDVTPLSLGIETLGGVFTKLIPRNTTIPTKKSQVFSTAADGQTQVEI 458 (640)
T ss_pred CCcCCcchhccchhhccchhhc----cccceeeeecchHHHHHHhhhhhheecccCCcccCchhhhheeecccCCceEEE
Confidence 9999999999999999999999 699999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHHH
Q psy7639 2381 QVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMIN 2460 (2568)
Q Consensus 2381 ~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~~ 2460 (2568)
.|+||||+++.+|++||.|.|.||||+|+|.|+|+|+|+||+|||.+|+|.|+.|||.+++++... ++||+++|++|++
T Consensus 459 kv~qgere~~~dnk~lG~f~l~gipp~pRgvpqieVtfDIdanGI~~vsA~dk~t~K~qsi~i~~s-ggLs~~ei~~mV~ 537 (640)
T KOG0102|consen 459 KVFQGEREMVNDNKLLGSFILQGIPPAPRGVPQIEVTFDIDANGIGTVSAKDKGTGKSQSITIASS-GGLSKDEIELMVG 537 (640)
T ss_pred EeeechhhhhccCcccceeeecccCCCCCCCCceeEEEeecCCceeeeehhhcccCCccceEEeec-CCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999987 5699999999999
Q ss_pred HHHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHH
Q psy7639 2461 DAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKS 2540 (2568)
Q Consensus 2461 ~~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~~~~~~l~~~ek~~i~~~l~e~~~WL~~~~~a~~ee~~~k~~~L~~~ 2540 (2568)
++++|+..|+.+|++++..|++++++|+.+..+.++.++++.++..+|+..+....+.+..-...+.++++.+...|++.
T Consensus 538 eaer~~~~d~~~~~~ie~~nka~s~~~~te~~~~~~~~~~~~~~~~~i~~~i~~l~~~~~~~~~~~~~~~k~~~~~l~q~ 617 (640)
T KOG0102|consen 538 EAERLASTDKEKREAIETKNKADSIIYDTEKSLKEFEEKIPAEECEKLEEKISDLRELVANKDSGDMEEIKKAMSALQQA 617 (640)
T ss_pred HHHHHHhhhHHHHHHhhhhcchhheecCchhhhhhhhhhCcHHHHHHHHHHHHHHHHHHhhhccCChhhHHHHHHHHHHh
Confidence 99999999999999999999999999999999999889999999999999999999988642223458999999999999
Q ss_pred HHHHHHHHhcCCC
Q psy7639 2541 CMPLMSKMHGGAS 2553 (2568)
Q Consensus 2541 ~~pi~~r~~e~~g 2553 (2568)
..|+++.++..++
T Consensus 618 ~lkl~es~~k~~~ 630 (640)
T KOG0102|consen 618 SLKLFESAYKNMG 630 (640)
T ss_pred hhHHHHHHHhhhc
Confidence 9999999997543
No 5
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=100.00 E-value=7.4e-102 Score=1046.29 Aligned_cols=584 Identities=69% Similarity=1.068 Sum_probs=552.1
Q ss_pred CCCCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEE-ecCCCceEEEEEcCceeeeChhhhHHHH
Q psy7639 1984 AGDMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVV-NDCSKPKIQVEFKGERKTFAPEEISSMV 2062 (2568)
Q Consensus 1984 ~~~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~-~~~~~~~~~v~~~~~~~~~~peei~a~i 2062 (2568)
.++.+++|++|+.++.+||+||++++|||||++|+|+.+|.+.++|||.++ ..++.+.+.+.+.++.+.|+||||+||+
T Consensus 45 ~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~peel~a~i 124 (653)
T PTZ00009 45 TDTERLIGDAAKNQVARNPENTVFDAKRLIGRKFDDSVVQSDMKHWPFKVTTGGDDKPMIEVTYQGEKKTFHPEEISSMV 124 (653)
T ss_pred CCCCEEEcHHHHHhhhhCcccEEhhhHHHhCCCCCchhHhhhhhcCceEEEEcCCCceEEEEEeCCceEEECHHHHHHHH
Confidence 346789999999999999999999999999999999999999999999987 4677888999888877899999999999
Q ss_pred HHHHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCe
Q psy7639 2063 LTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGG 2142 (2568)
Q Consensus 2063 L~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGgg 2142 (2568)
|++||+.|++++|.+|++|||||||||++.||+||++||++|||+|++|||||||||++||+.+....++++||||||||
T Consensus 125 L~~lk~~ae~~~g~~v~~~VItVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EptAAAl~y~~~~~~~~~~~vlv~D~Ggg 204 (653)
T PTZ00009 125 LQKMKEIAEAYLGKQVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKGDGEKNVLIFDLGGG 204 (653)
T ss_pred HHHHHHHHHHHhCCCcceeEEEeCCCCCHHHHHHHHHHHHHcCCceeEEecchHHHHHHHhhhccCCCCCEEEEEECCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999765445688999999999
Q ss_pred eeEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHh-CCCCCCCHHHHHHHHHHHHHHhhccCCcceeE
Q psy7639 2143 TFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKY-KKDMSVNPRALRRLRTAAERAKRTLSSSTEAS 2221 (2568)
Q Consensus 2143 t~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~-~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~ 2221 (2568)
||||||+++.+| .++|+++.||.+|||+|||++|++|++++|++++ +.++..++++++||+.+||+||+.||++.++.
T Consensus 205 T~dvsv~~~~~~-~~~v~a~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~aEkaK~~LS~~~~~~ 283 (653)
T PTZ00009 205 TFDVSLLTIEDG-IFEVKATAGDTHLGGEDFDNRLVEFCVQDFKRKNRGKDLSSNQRALRRLRTQCERAKRTLSSSTQAT 283 (653)
T ss_pred eEEEEEEEEeCC-eEEEEEecCCCCCChHHHHHHHHHHHHHHHHHhccCCCCccCHHHHHHHHHHHHHHHHhCCCCceEE
Confidence 999999999988 8999999999999999999999999999999988 47888999999999999999999999999999
Q ss_pred EEEecccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCCCC
Q psy7639 2222 IEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNL 2301 (2568)
Q Consensus 2222 ~~i~~~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~~ 2301 (2568)
+.|+++++|.|++++|||++||++|++++++++.+|+++|+++++++.+|+.|+|||||||||+||++|+++|+++++..
T Consensus 284 i~i~~~~~~~d~~~~itR~~fe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~i~~~f~~~~~~~ 363 (653)
T PTZ00009 284 IEIDSLFEGIDYNVTISRARFEELCGDYFRNTLQPVEKVLKDAGMDKRSVHEVVLVGGSTRIPKVQSLIKDFFNGKEPCK 363 (653)
T ss_pred EEEEeccCCceEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCCChhHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888999
Q ss_pred CCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEEEE
Q psy7639 2302 SINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQ 2381 (2568)
Q Consensus 2302 ~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~i~ 2381 (2568)
++|||||||+|||++||+|++...++++++.+.|++|++||+++.+|.+.+|||||++||++++++|+|..|+|+.+.|+
T Consensus 364 ~~npdeaVA~GAa~~aa~ls~~~~~~~~~~~~~dv~p~slgi~~~~~~~~~ii~~~t~iP~~~~~~f~t~~d~q~~~~i~ 443 (653)
T PTZ00009 364 SINPDEAVAYGAAVQAAILTGEQSSQVQDLLLLDVTPLSLGLETAGGVMTKLIERNTTIPTKKSQIFTTYADNQPGVLIQ 443 (653)
T ss_pred CCCcchHHhhhhhhhHHHhcCCccccccceEEEeecccccCccccCCceEEEEeCCCcCCccceeEeEeecCCCceEEEE
Confidence 99999999999999999999866678899999999999999999999999999999999999999999999999999999
Q ss_pred EeecCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHHHH
Q psy7639 2382 VFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMIND 2461 (2568)
Q Consensus 2382 v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~ 2461 (2568)
||||++..+.+|..||+|.|.++|++++|.++|+|+|++|.||+|+|++.++.||+...+++.....+||++++++++++
T Consensus 444 i~ege~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~id~~Gil~v~~~~~~t~~~~~~~i~~~~~~ls~~~i~~~~~~ 523 (653)
T PTZ00009 444 VFEGERAMTKDNNLLGKFHLDGIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNKITITNDKGRLSKADIDRMVNE 523 (653)
T ss_pred EEecccccCCCCceEEEEEEcCCCCCCCCCceEEEEEEECCCCeEEEEEecccCCceeeEEEeeccccccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988866678999999999999
Q ss_pred HHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhhh--ccCCCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHH
Q psy7639 2462 AERYKDEDERQKERISARNNLEAYVFNVKQALDN--AGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQK 2539 (2568)
Q Consensus 2462 ~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~~--~~~~l~~~ek~~i~~~l~e~~~WL~~~~~a~~ee~~~k~~~L~~ 2539 (2568)
+.++..+|+.++++.+++|+||+|||++|++|.+ +...+++++++++++.+++.++||+++++++.++|++++++|++
T Consensus 524 ~~~~~~~d~~~~~~~eakN~lEs~Iy~~r~~L~~~~~~~~~t~ee~~~l~~~l~~~~~wL~~~~~~~~~~~~~kl~eL~~ 603 (653)
T PTZ00009 524 AEKYKAEDEANRERVEAKNGLENYCYSMKNTLQDEKVKGKLSDSDKATIEKAIDEALEWLEKNQLAEKEEFEHKQKEVES 603 (653)
T ss_pred HHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhccCCHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999975 44789999999999999999999998878899999999999999
Q ss_pred HHHHHHHHHhcCC-CCCC------CC----C----------CCCCcCCCC
Q psy7639 2540 SCMPLMSKMHGGA-SAGD------MP----R----------GGPTVEEVD 2568 (2568)
Q Consensus 2540 ~~~pi~~r~~e~~-g~~~------~~----g----------~g~~~~e~d 2568 (2568)
.+.|+..|++..+ ||+| +| | +||||||||
T Consensus 604 ~~~pi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (653)
T PTZ00009 604 VCNPIMTKMYQAAGGGMPGGMPGGMPGGMPGGAGPAGAGASSGPTVEEVD 653 (653)
T ss_pred HHHHHHHHHHhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccccCC
Confidence 9999999998642 2222 11 1 479999998
No 6
>KOG0102|consensus
Probab=100.00 E-value=2.6e-102 Score=929.15 Aligned_cols=592 Identities=49% Similarity=0.773 Sum_probs=566.2
Q ss_pred HHHHHhcccccEEEEEEcccccc--cccCCcccccccccchh----hhhHHHHhhhcCCCccccccccccccccCChhhh
Q psy7639 1377 RQKERISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRCRE----ECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQ 1450 (2568)
Q Consensus 1377 ~~~~~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~~~----~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~ 1450 (2568)
-..-++||||||++++.+..+.. |.+|.|+|||+|+|+.+ +|..|++|+..||.||++.-||+|||+++|+.++
T Consensus 29 vigidlgttnS~va~meg~~~kiienaegqrtTpsvva~~kdge~Lvg~~akrqav~n~~ntffatKrligRrf~d~evq 108 (640)
T KOG0102|consen 29 VIGIDLGTTNSCVAVMEGKKPKIIENAEGQRTTPSVVAFTKDGERLVGMPAKRQAVTNPENTFFATKRLIGRRFDDPEVQ 108 (640)
T ss_pred eeeEeeeccceeEEEEeCCCceEeecccccccCCceEEEeccccEEecchhhhhhccCCCceEEEehhhhhhhccCHHHH
Confidence 35567999999999999988877 99999999999999544 6999999999999999999999999999999999
Q ss_pred hcccccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHH
Q psy7639 1451 QDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAI 1530 (2568)
Q Consensus 1451 ~~~k~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~ 1530 (2568)
++++.+||++++ ..+...++++ .++.|+|.++.+++|.+||++|+.|++..+..+|+|||||||+.||+++++|+++
T Consensus 109 ~~~k~vpyKiVk-~~ngdaw~e~--~G~~~spsqig~~vl~kmk~tae~yl~~~v~~avvtvpAyfndsqRqaTkdag~i 185 (640)
T KOG0102|consen 109 KDIKQVPYKIVK-ASNGDAWVEA--RGKQYSPSQIGAFVLMKMKETAEAYLGKKVKNAVITVPAYFNDSQRQATKDAGQI 185 (640)
T ss_pred HHHHhCCcceEE-ccCCcEEEEe--CCeEecHHHHHHHHHHHHHHHHHHHcCchhhheeeccHHHHhHHHHHHhHhhhhh
Confidence 999999999999 6677788888 7899999999999999999999999999999999999999999999999999999
Q ss_pred cCCceEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHH
Q psy7639 1531 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 1610 (2568)
Q Consensus 1531 AGL~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~ 1610 (2568)
|||+|++++|||||||++|+++.+. ...++|||+||||||+||+++++| +|+|.++.||.+|||+|||..+..|+..
T Consensus 186 agl~vlrvineptaaalaygld~k~--~g~iaV~dLgggtfdisilei~~g-vfevksTngdtflggedfd~~~~~~~v~ 262 (640)
T KOG0102|consen 186 AGLNVLRVINEPTAAALAYGLDKKE--DGVIAVFDLGGGTFDISILEIEDG-VFEVKSTNGDTHLGGEDFDNALVRFIVS 262 (640)
T ss_pred ccceeeccCCccchhHHhhcccccC--CCceEEEEcCCceeeeeeehhccc-eeEEEeccCccccChhHHHHHHHHHHHH
Confidence 9999999999999999999998754 678999999999999999999988 9999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccCC----cceeeecCHHHHHHHHhHHHHHHHHHHHH
Q psy7639 1611 EFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDG----IDFYTKISRARFEELCSDLFRSTLQPVEK 1686 (2568)
Q Consensus 1611 ~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~----~~~~~~itr~~fe~l~~pli~~i~~~i~~ 1686 (2568)
+|++..++++..+..++++|++++|++|+.||...++.|++|+...+ ..+.+++||.+||+++.++|+|+++++.+
T Consensus 263 ~fk~~~gidl~kd~~a~qrl~eaaEkaKielSs~~~tei~lp~iTada~gpkh~~i~~tr~efe~~v~~lI~Rti~p~~~ 342 (640)
T KOG0102|consen 263 EFKKEEGIDLTKDRMALQRLREAAEKAKIELSSRQQTEINLPFITADASGPKHLNIELTRGEFEELVPSLIARTIEPCKK 342 (640)
T ss_pred hhhcccCcchhhhHHHHHHHHHHHHhhhhhhhhcccceeccceeeccCCCCeeEEEeecHHHHHHhhHHHHHhhhhHHHH
Confidence 99999999999999999999999999999999999999999987754 56899999999999999999999999999
Q ss_pred HHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeeccc
Q psy7639 1687 ALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPL 1766 (2568)
Q Consensus 1687 ~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~ 1766 (2568)
+|++|++..+||++|+||||++|||.|++.|++.| ++.+...+|||++||.|||+|++.++|. +++++|+||+|+
T Consensus 343 aL~dA~~~~~di~EV~lvggmtrmpkv~s~V~e~f-gk~p~~~vnPdeava~GAaiqggvl~ge----VkdvlLLdVtpL 417 (640)
T KOG0102|consen 343 ALRDASLSSSDINEVILVGGMTRMPKVQSTVKELF-GKGPSKGVNPDEAVAGGAAIQGGVLSGE----VKDVLLLDVTPL 417 (640)
T ss_pred HHHhccCChhhhhhhhhhcchhhcHHHHHHHHHHh-CCCCCCCcCCcchhccchhhccchhhcc----ccceeeeecchH
Confidence 99999999999999999999999999999999999 6778899999999999999999999985 689999999999
Q ss_pred ccceeecCcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEE
Q psy7639 1767 SLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFD 1846 (2568)
Q Consensus 1767 slGie~~~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~ 1846 (2568)
+||||+.+|.|..+|||||+||+++++.|+|+.|+|+.|.|+|||||+.+..+|.++|.|.+.||||.|+|.|+|+|+|+
T Consensus 418 sLgietlggvft~Li~rnttIptkksqvfstaadgqt~V~ikv~qgere~~~dnk~lG~f~l~gipp~pRgvpqieVtfD 497 (640)
T KOG0102|consen 418 SLGIETLGGVFTKLIPRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMVNDNKLLGSFILQGIPPAPRGVPQIEVTFD 497 (640)
T ss_pred HHHHHhhhhhheecccCCcccCchhhhheeecccCCceEEEEeeechhhhhccCcccceeeecccCCCCCCCCceeEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCeeEEEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy7639 1847 LDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNK 1926 (2568)
Q Consensus 1847 id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~~~~~ 1926 (2568)
||+|||.+|+|+|+.||++++|+|..+.+ ||++||++|++++++|...|+.++++++..|.++++++..++.+.++..+
T Consensus 498 IdanGI~~vsA~dk~t~K~qsi~i~~sgg-Ls~~ei~~mV~eaer~~~~d~~~~~~ie~~nka~s~~~~te~~~~~~~~~ 576 (640)
T KOG0102|consen 498 IDANGIGTVSAKDKGTGKSQSITIASSGG-LSKDEIELMVGEAERLASTDKEKREAIETKNKADSIIYDTEKSLKEFEEK 576 (640)
T ss_pred ecCCceeeeehhhcccCCccceEEeecCC-CCHHHHHHHHHHHHHHHhhhHHHHHHhhhhcchhheecCchhhhhhhhhh
Confidence 99999999999999999999999998755 99999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhcccccccCCCC
Q psy7639 1927 LTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAG 1980 (2568)
Q Consensus 1927 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~~~~ 1980 (2568)
++.+..++|+..+..+.+++.+-...+.++++.++..|++..+|+.+.+|..++
T Consensus 577 ~~~~~~~~i~~~i~~l~~~~~~~~~~~~~~~k~~~~~l~q~~lkl~es~~k~~~ 630 (640)
T KOG0102|consen 577 IPAEECEKLEEKISDLRELVANKDSGDMEEIKKAMSALQQASLKLFESAYKNMG 630 (640)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhccCChhhHHHHHHHHHHhhhHHHHHHHhhhc
Confidence 999999999999999999997655667899999999999999999999997543
No 7
>KOG0101|consensus
Probab=100.00 E-value=3.7e-101 Score=968.76 Aligned_cols=599 Identities=68% Similarity=1.041 Sum_probs=582.4
Q ss_pred HHHhcccccEEEEEEcccccc--cccCCcccccccccchh---hhhHHHHhhhcCCCccccccccccccccCChhhhhcc
Q psy7639 1379 KERISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRCRE---ECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDM 1453 (2568)
Q Consensus 1379 ~~~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~~~---~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~~ 1453 (2568)
...||||.|++++|.+++..+ |.+|+++|||+|+|..+ +|..|++|...||.||++++||+||+.++|+.++.++
T Consensus 11 GIdlGtT~s~v~v~~~~~v~iian~~g~rttPs~vaf~~~e~~vg~~a~~qv~~np~ntv~~~krliGr~f~d~~v~~~~ 90 (620)
T KOG0101|consen 11 GIDLGTTYSCVGVYQSGKVEIIANDQGNRTTPSVVAFTDTERLIGDAAKNQVARNPDNTVFDAKRLIGRFFDDPEVQSDM 90 (620)
T ss_pred eEeccCccceeeeEcCCcceeeeccccCccccceeeecccccchhhhhhhhhhcCCcceeeehhhhcCccccchhhHhHh
Confidence 456999999999999887777 99999999999999654 6999999999999999999999999999999999999
Q ss_pred cccccEEeeCC-CCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcC
Q psy7639 1454 KHWPFTVVNDC-SKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAG 1532 (2568)
Q Consensus 1454 k~~~~~~~~~~-~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AG 1532 (2568)
++|||.+.... .+|.+.+.+++..+.|+|+++++++|.+|++.|+.|+|.++.++|+|||+||++.||+++++|+.+||
T Consensus 91 k~~pf~V~~~~~~~~~i~~~~~~~~~~f~peeiss~~L~klke~Ae~~Lg~~v~~aviTVPa~F~~~Qr~at~~A~~iaG 170 (620)
T KOG0101|consen 91 KLWPFKVISDQGGKPKIQVTYKGETKSFNPEEISSMVLTKLKETAEAYLGKTVKKAVVTVPAYFNDSQRAATKDAALIAG 170 (620)
T ss_pred hcCCcccccccCCcceEEecccccceeeeeeeeeehhccccHHHHHHHhcCceeeEEEEecCCcCHHHHHHHHHHHHhcC
Confidence 99999999554 46899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHH
Q psy7639 1533 LNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 1612 (2568)
Q Consensus 1533 L~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~ 1612 (2568)
|+++++|+||+|||++|++++......++||||+||||||||++.+..| ++.|+++.||++|||++||+.|.+|+..+|
T Consensus 171 l~vlrii~EPtAaalAygl~k~~~~~~~VlI~DlGggtfdvs~l~i~gG-~~~vkat~gd~~lGGedf~~~l~~h~~~ef 249 (620)
T KOG0101|consen 171 LNVLRIINEPTAAALAYGLDKKVLGERNVLIFDLGGGTFDVSVLSLEGG-IFEVKATAGDTHLGGEDFDNKLVNHFAAEF 249 (620)
T ss_pred CceeeeecchHHHHHHhhccccccceeeEEEEEcCCCceeeeeEEeccc-hhhhhhhcccccccchhhhHHHHHHHHHHH
Confidence 9999999999999999998887777889999999999999999999888 999999999999999999999999999999
Q ss_pred HhhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHHcC
Q psy7639 1613 KRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAK 1692 (2568)
Q Consensus 1613 ~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~a~ 1692 (2568)
+++++.+...+.+++.+|+.+||.+|+.||+..++++.++++++|.+|...|||.+||++|.+++.++..+++.+|++++
T Consensus 250 ~~k~~~d~~~n~r~l~rLR~a~E~aKr~LS~~~~~~i~vdsL~~g~d~~~~itrarfe~l~~dlf~~~~~~v~~~L~da~ 329 (620)
T KOG0101|consen 250 KRKAGKDIGGNARALRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALKDAK 329 (620)
T ss_pred HHhhccccccchHHHHHHHHHHHHHHhhhcccccceeccchhhccccccceeehhhhhhhhhHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeecccccceee
Q psy7639 1693 LDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIET 1772 (2568)
Q Consensus 1693 ~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slGie~ 1772 (2568)
+.+.+|+.|+||||||++|.+|..++++|+++.+..++||||+||+|||+||++++|..+..+.+++++|+.|+++||++
T Consensus 330 ~dk~~i~~vvlVGGstriPk~~~ll~d~f~~k~~~~sinpDeavA~GAavqaa~~~g~~~~~~~~l~lid~~pl~~gve~ 409 (620)
T KOG0101|consen 330 LDKSDIDEVVLVGGSTRIPKVQKLLEDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSLNIQDLLLIDVAPLSLGVET 409 (620)
T ss_pred cCccCCceeEEecCcccchHHHHHHHHHhcccccccCCCHHHHHHhhHHHHhhhccCCccccccceeeeecccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999988877899999999999999999
Q ss_pred cCcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcCCee
Q psy7639 1773 AGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGI 1852 (2568)
Q Consensus 1773 ~~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~nGi 1852 (2568)
.+|.|.++|+|||++|+.++++|+|+.|||+.+.|.|||||+.++++|.+||.|+|.||||+|+|+|+|+|+|+||.|||
T Consensus 410 a~~~~~~~i~~~t~~P~~k~~~ftt~~dnQp~V~I~VyEger~~~kdn~~lg~feL~gippaprgvp~IevtfdiD~ngi 489 (620)
T KOG0101|consen 410 AGGVFTVLIPRNTSIPTKKTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGI 489 (620)
T ss_pred cCCcceeeeecccccceeeeeeeeeecCCCCceeEEEEeccccccccccccceeeecCCCccccCCcceeEEEecCCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHH
Q psy7639 1853 LNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEK 1932 (2568)
Q Consensus 1853 L~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~~~~~~~~~~~ 1932 (2568)
|+|++.|++||++..++|+++.++||+++|++|+.++++|+.+|..+++++.++|.||+|+|+++..+++..++++++++
T Consensus 490 L~Vta~d~stgK~~~i~i~n~~grls~~~Ierm~~ea~~~~~~d~~~~~~v~~~~~le~~~f~~~~~~~~~~~~i~~~~~ 569 (620)
T KOG0101|consen 490 LNVTAVDKSTGKENKITITNDKGRLSKEEIERMVQEAEKYKAEDEKQKDKVAAKNSLESYAFNMKATVEDEKGKINEEDK 569 (620)
T ss_pred EEEeeccccCCccceEEEecccceeehhhhhhhhhhhhhccccCHHHHHHHHHHhhHHHHHHhhhhhhhhhccccChhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888799999999
Q ss_pred HHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhcccccccCC
Q psy7639 1933 SRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGG 1978 (2568)
Q Consensus 1933 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~~ 1978 (2568)
.++.+.|.++.+||+.|+.+++++|+.|.++|+..|.||+.++|++
T Consensus 570 ~~~~~~~~~~i~wl~~~~~~~~~e~e~k~~el~~~~~p~~~~~~~~ 615 (620)
T KOG0101|consen 570 QKILDKCNEVINWLDKNQLAEKEEFEHKQKELELVCNPIISKLYQG 615 (620)
T ss_pred hhHHHHHHHHHHHhhhcccccccHHHHHHHHHHhhccHHHHhhhcc
Confidence 9999999999999999998999999999999999999999999986
No 8
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=100.00 E-value=1.7e-99 Score=1010.66 Aligned_cols=553 Identities=48% Similarity=0.761 Sum_probs=521.5
Q ss_pred CCCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEEe-cCCCceEEEEEcCceeeeChhhhHHHHH
Q psy7639 1985 GDMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DCSKPKIQVEFKGERKTFAPEEISSMVL 2063 (2568)
Q Consensus 1985 ~~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~peei~a~iL 2063 (2568)
++.++||.+|++++.+||.+|++++||+||++|+|+.++...+.|||.++. .++.+.+.. +..+.|+|+||++|+|
T Consensus 69 ~~~~lvG~~Ak~~~~~~p~~ti~~~KRliG~~~~d~~v~~~~~~~p~~vv~~~~~~~~i~~---~~~~~~speeisa~iL 145 (657)
T PTZ00186 69 GSEKLVGLAAKRQAITNPQSTFYAVKRLIGRRFEDEHIQKDIKNVPYKIVRAGNGDAWVQD---GNGKQYSPSQIGAFVL 145 (657)
T ss_pred CCCEEEcHHHHHhhhhCchhHHHHHHHHhccccccHHHHHhhccCcEEEEEcCCCceEEEe---CCCeEEcHHHHHHHHH
Confidence 456899999999999999999999999999999999999999999999984 455544432 2247899999999999
Q ss_pred HHHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCee
Q psy7639 2064 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGT 2143 (2568)
Q Consensus 2064 ~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt 2143 (2568)
++||+.|++++|.+|++|||||||||++.||+||++||++|||+|+||||||||||++||+++. .++++|||||||||
T Consensus 146 ~~Lk~~Ae~~lg~~v~~aVITVPayF~~~qR~at~~Aa~~AGl~v~rlInEPtAAAlayg~~~~--~~~~vlV~DlGGGT 223 (657)
T PTZ00186 146 EKMKETAENFLGHKVSNAVVTCPAYFNDAQRQATKDAGTIAGLNVIRVVNEPTAAALAYGMDKT--KDSLIAVYDLGGGT 223 (657)
T ss_pred HHHHHHHHHHhCCccceEEEEECCCCChHHHHHHHHHHHHcCCCeEEEEcChHHHHHHHhccCC--CCCEEEEEECCCCe
Confidence 9999999999999999999999999999999999999999999999999999999999998764 46899999999999
Q ss_pred eEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcceeEEE
Q psy7639 2144 FDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIE 2223 (2568)
Q Consensus 2144 ~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~~~ 2223 (2568)
|||||+++.+| .|+|++++||.+|||+|||++|++|++++|+++++.|+..+++++++|+.+||+||+.||.+.++.++
T Consensus 224 ~DvSil~~~~g-~~~V~at~Gd~~LGG~DfD~~l~~~~~~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~~~i~ 302 (657)
T PTZ00186 224 FDISVLEIAGG-VFEVKATNGDTHLGGEDFDLALSDYILEEFRKTSGIDLSKERMALQRVREAAEKAKCELSSAMETEVN 302 (657)
T ss_pred EEEEEEEEeCC-EEEEEEecCCCCCCchhHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEE
Confidence 99999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccCC----cceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCC
Q psy7639 2224 IDALYDG----IDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSL 2299 (2568)
Q Consensus 2224 i~~~~~~----~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~ 2299 (2568)
++++..+ .++.++|||++||+||++|++|++.+|+++|++|++++.+||.|+|||||||||+||++|+++| ++++
T Consensus 303 i~~i~~~~~g~~~~~~~ItR~efe~l~~~l~~r~~~~v~~~L~~a~~~~~dId~VvLVGGssriP~V~~~l~~~f-g~~~ 381 (657)
T PTZ00186 303 LPFITANADGAQHIQMHISRSKFEGITQRLIERSIAPCKQCMKDAGVELKEINDVVLVGGMTRMPKVVEEVKKFF-QKDP 381 (657)
T ss_pred EeeeccCCCCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCCEEEEECCcccChHHHHHHHHHh-CCCc
Confidence 9887643 4689999999999999999999999999999999999999999999999999999999999999 5677
Q ss_pred CCCCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEE
Q psy7639 2300 NLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVT 2379 (2568)
Q Consensus 2300 ~~~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~ 2379 (2568)
..++|||||||+|||+||++|++ .++++.+.|++|+||||++.+|.+.+||||||+||++++++|+|..|||+.+.
T Consensus 382 ~~~~nPdeaVA~GAAi~a~~l~~----~~~~~~l~Dv~p~slgie~~~g~~~~iI~rnt~iP~~~~~~f~t~~dnQ~~v~ 457 (657)
T PTZ00186 382 FRGVNPDEAVALGAATLGGVLRG----DVKGLVLLDVTPLSLGIETLGGVFTRMIPKNTTIPTKKSQTFSTAADNQTQVG 457 (657)
T ss_pred cccCCCchHHHHhHHHHHHHhcc----ccCceEEEeeccccccceecCCEEEEEEeCCCEeeEEEeeccccccCCCceEE
Confidence 78999999999999999999998 46789999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHH
Q psy7639 2380 IQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMI 2459 (2568)
Q Consensus 2380 i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~ 2459 (2568)
|+|||||+.++.+|..||+|+|.|+||+|+|.++|+|+|++|.||+|+|+|.++.||++..++|... .+||+++|++|+
T Consensus 458 i~i~qGe~~~~~~n~~lg~~~l~~ip~~~~G~~~I~Vtf~iD~nGiL~V~a~d~~tg~~~~~~i~~~-~~ls~~~i~~~~ 536 (657)
T PTZ00186 458 IKVFQGEREMAADNQMMGQFDLVGIPPAPRGVPQIEVTFDIDANGICHVTAKDKATGKTQNITITAN-GGLSKEQIEQMI 536 (657)
T ss_pred EEEEEecccccccccccceEEEcCCCCCCCCCCcEEEEEEEcCCCEEEEEEEEccCCcEEEEEeccC-ccCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999865 579999999999
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHH
Q psy7639 2460 NDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQK 2539 (2568)
Q Consensus 2460 ~~~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~~~~~~l~~~ek~~i~~~l~e~~~WL~~~~~a~~ee~~~k~~~L~~ 2539 (2568)
+++++++.+|+.++++.+++|++|.+++.+++.+.+. ..+++++++.++..++..++||.. ++.+.++|++++++|++
T Consensus 537 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~l~~ 614 (657)
T PTZ00186 537 RDSEQHAEADRVKRELVEVRNNAETQLTTAERQLGEW-KYVSDAEKENVKTLVAELRKAMEN-PNVAKDDLAAATDKLQK 614 (657)
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhc-CCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999753 578999999999999999999984 33467999999999999
Q ss_pred HHHHHHHHHhcC
Q psy7639 2540 SCMPLMSKMHGG 2551 (2568)
Q Consensus 2540 ~~~pi~~r~~e~ 2551 (2568)
.+.++..+++..
T Consensus 615 ~~~~~~~~~~~~ 626 (657)
T PTZ00186 615 AVMECGRTEYQQ 626 (657)
T ss_pred HHHHHHHHHHhh
Confidence 999999988764
No 9
>PRK13411 molecular chaperone DnaK; Provisional
Probab=100.00 E-value=7.3e-97 Score=996.02 Aligned_cols=554 Identities=49% Similarity=0.794 Sum_probs=523.6
Q ss_pred CCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEEe-cCCCceEEEEEcCceeeeChhhhHHHHHH
Q psy7639 1986 DMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DCSKPKIQVEFKGERKTFAPEEISSMVLT 2064 (2568)
Q Consensus 1986 ~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~peei~a~iL~ 2064 (2568)
++++||.+|++++.+||+||++++|||||++|+|+. ...+++||.++. .+|.+.+.+ .+ ..|+|+||+||+|+
T Consensus 46 ~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~--~~~~~~~~~~v~~~~~~~~~~i--~~--~~~~peei~a~iL~ 119 (653)
T PRK13411 46 GDRLVGQLAKRQAVTNAENTVYSIKRFIGRRWDDTE--EERSRVPYTCVKGRDDTVNVQI--RG--RNYTPQEISAMILQ 119 (653)
T ss_pred CCEEEcHHHHHhhhhCcccchHHHHHHhCCCccchh--HHhhcCCceEEecCCCceEEEE--CC--EEECHHHHHHHHHH
Confidence 578999999999999999999999999999999974 456899999984 455555555 33 67999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCeee
Q psy7639 2065 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTF 2144 (2568)
Q Consensus 2065 ~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt~ 2144 (2568)
+||+.|+.++|.+|.+|||||||||++.||+||++||++|||+|++||||||||||+||+.+.. .++++||||||||||
T Consensus 120 ~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EPtAAAl~y~~~~~~-~~~~vlV~DlGgGT~ 198 (653)
T PRK13411 120 KLKQDAEAYLGEPVTQAVITVPAYFTDAQRQATKDAGTIAGLEVLRIINEPTAAALAYGLDKQD-QEQLILVFDLGGGTF 198 (653)
T ss_pred HHHHHHHHHhCCCcceEEEEECCCCCcHHHHHHHHHHHHcCCCeEEEecchHHHHHHhcccccC-CCCEEEEEEcCCCeE
Confidence 9999999999999999999999999999999999999999999999999999999999997642 467899999999999
Q ss_pred EEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcceeEEEE
Q psy7639 2145 DVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEI 2224 (2568)
Q Consensus 2145 dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~~~i 2224 (2568)
||||+++.+| .++|++++||.+|||+|||++|++||+++|++++++|++.++++++||+.+||+||+.||++.++.+++
T Consensus 199 dvsi~~~~~~-~~~V~at~gd~~LGG~dfD~~l~~~l~~~f~~~~~~d~~~~~~~~~rL~~~aE~aK~~LS~~~~~~i~i 277 (653)
T PRK13411 199 DVSILQLGDG-VFEVKATAGNNHLGGDDFDNCIVDWLVENFQQQEGIDLSQDKMALQRLREAAEKAKIELSSMLTTSINL 277 (653)
T ss_pred EEEEEEEeCC-EEEEEEEecCCCcCHHHHHHHHHHHHHHHHHHhhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence 9999999988 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCC----cceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCCC
Q psy7639 2225 DALYDG----IDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLN 2300 (2568)
Q Consensus 2225 ~~~~~~----~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~ 2300 (2568)
++++.+ .++.+.|||++||++|+|++++++++|+++|+++++++++|+.|+|||||||||+||+.|+++|+++++.
T Consensus 278 ~~~~~d~~~~~~~~~~itR~~fe~l~~~l~~~~~~~i~~~L~~a~~~~~~id~ViLvGGssriP~v~~~l~~~f~~~~~~ 357 (653)
T PRK13411 278 PFITADETGPKHLEMELTRAKFEELTKDLVEATIEPMQQALKDAGLKPEDIDRVILVGGSTRIPAVQEAIQKFFGGKQPD 357 (653)
T ss_pred eeeccCCCCCeeEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCCcchHHHHHHHHcCCcCcC
Confidence 987643 5799999999999999999999999999999999999999999999999999999999999999888899
Q ss_pred CCCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEEE
Q psy7639 2301 LSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTI 2380 (2568)
Q Consensus 2301 ~~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~i 2380 (2568)
.++|||||||+|||+||++|++ .++++.+.|++|++||+++.+|.|.+|||||++||++++++|+|..|+|+.+.|
T Consensus 358 ~~~npdeaVA~GAAi~aa~l~~----~~~~~~~~dv~p~slgi~~~~~~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i 433 (653)
T PRK13411 358 RSVNPDEAVALGAAIQAGVLGG----EVKDLLLLDVTPLSLGIETLGEVFTKIIERNTTIPTSKSQVFSTATDGQTSVEI 433 (653)
T ss_pred CCCCchHHHHHHHHHHHHhhcC----CccceeeeecccceeeEEecCCceEEEEECCCcccceeeEEEEeccCCCeEEEE
Confidence 9999999999999999999998 378999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHHH
Q psy7639 2381 QVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMIN 2460 (2568)
Q Consensus 2381 ~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~~ 2460 (2568)
+|||||+..+.+|..||+|.|.|+||+|+|.++|+|+|++|.||+|+|++.+..||++..+++.+. .+||++++++|++
T Consensus 434 ~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~d~~t~~~~~~~i~~~-~~ls~~ei~~~~~ 512 (653)
T PRK13411 434 HVLQGERAMAKDNKSLGKFLLTGIPPAPRGVPQIEVSFEIDVNGILKVSAQDQGTGREQSIRITNT-GGLSSNEIERMRQ 512 (653)
T ss_pred EEEEecCcccccCceeeEEEEcCCCCCCCCCccEEEEEEECCCCeEEEEEeeccCCceEeeEEecc-ccchHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998888764 6799999999999
Q ss_pred HHHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHH
Q psy7639 2461 DAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKS 2540 (2568)
Q Consensus 2461 ~~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~~~~~~l~~~ek~~i~~~l~e~~~WL~~~~~a~~ee~~~k~~~L~~~ 2540 (2568)
++.+|+++|++++++++++|+||+|+|.+|+.|++....+++++|+++++.|++.++||+++ +++.++|++++++|++.
T Consensus 513 ~~~~~~~~D~~~~~~~eakN~lEs~iy~~r~~l~~~~~~~~~~er~~i~~~l~~~~~wL~~~-~~~~~~~~~~~~el~~~ 591 (653)
T PRK13411 513 EAEKYAEEDRRRKQLIELKNQADSLLYSYESTLKENGELISEELKQRAEQKVEQLEAALTDP-NISLEELKQQLEEFQQA 591 (653)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987668999999999999999999999984 46899999999999999
Q ss_pred HHHHHHHHhcCCC
Q psy7639 2541 CMPLMSKMHGGAS 2553 (2568)
Q Consensus 2541 ~~pi~~r~~e~~g 2553 (2568)
+.|+..++|+++|
T Consensus 592 ~~~i~~~~y~~~~ 604 (653)
T PRK13411 592 LLAIGAEVYQQGG 604 (653)
T ss_pred HHHHHHHHHhhcC
Confidence 9999999987644
No 10
>PRK13410 molecular chaperone DnaK; Provisional
Probab=100.00 E-value=1.9e-96 Score=987.01 Aligned_cols=552 Identities=46% Similarity=0.756 Sum_probs=516.7
Q ss_pred CCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEE-ecCCCceEEEEEcCceeeeChhhhHHHHHH
Q psy7639 1986 DMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVV-NDCSKPKIQVEFKGERKTFAPEEISSMVLT 2064 (2568)
Q Consensus 1986 ~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~-~~~~~~~~~v~~~~~~~~~~peei~a~iL~ 2064 (2568)
++++||.+|++++.+||+||++++|||||++|+| ++...+++||.++ +.+|...+.+.. ..+.|+||||+||+|+
T Consensus 46 ~~~~vG~~A~~~~~~~p~~ti~~~KRliG~~~~~--~~~~~~~~~~~v~~~~~g~~~i~~~~--~~~~~speel~a~iL~ 121 (668)
T PRK13410 46 GELLVGQLARRQLVLNPQNTFYNLKRFIGRRYDE--LDPESKRVPYTIRRNEQGNVRIKCPR--LEREFAPEELSAMILR 121 (668)
T ss_pred CCEEECHHHHHhhHhCccceehHHhhhhCCCchh--hHHhhccCCeEEEECCCCcEEEEEec--CCeEEcHHHHHHHHHH
Confidence 5789999999999999999999999999999977 5666789999997 456666666543 3478999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCeee
Q psy7639 2065 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTF 2144 (2568)
Q Consensus 2065 ~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt~ 2144 (2568)
+||+.|+.++|.+|++|||||||||++.||+||++||++|||+|++||||||||||+||+++. .++++||||||||||
T Consensus 122 ~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EPtAAAlayg~~~~--~~~~vlV~DlGgGT~ 199 (668)
T PRK13410 122 KLADDASRYLGEPVTGAVITVPAYFNDSQRQATRDAGRIAGLEVERILNEPTAAALAYGLDRS--SSQTVLVFDLGGGTF 199 (668)
T ss_pred HHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEecchHHHHHHhccccC--CCCEEEEEECCCCeE
Confidence 999999999999999999999999999999999999999999999999999999999999764 468999999999999
Q ss_pred EEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcceeEEEE
Q psy7639 2145 DVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEI 2224 (2568)
Q Consensus 2145 dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~~~i 2224 (2568)
||||+++.+| .|+|++++||.+|||+|||++|++||+++|.+++++|++.+++++++|+.+||+||+.||.+.++.+++
T Consensus 200 Dvsv~~~~~g-~~~V~at~gd~~lGG~dfD~~l~~~l~~~f~~~~~~d~~~~~~a~~rL~~~aEkaK~~LS~~~~~~i~i 278 (668)
T PRK13410 200 DVSLLEVGNG-VFEVKATSGDTQLGGNDFDKRIVDWLAEQFLEKEGIDLRRDRQALQRLTEAAEKAKIELSGVSVTDISL 278 (668)
T ss_pred EEEEEEEcCC-eEEEEEeecCCCCChhHHHHHHHHHHHHHHHhhhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCC----cceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCCC
Q psy7639 2225 DALYDG----IDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLN 2300 (2568)
Q Consensus 2225 ~~~~~~----~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~ 2300 (2568)
++++.+ .++..+|||++||++|+++++++..+|+++|++|++++++|+.|+|||||||||+||++|+++| ++++.
T Consensus 279 ~~~~~~~~g~~~~~~~itR~~FE~l~~~l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGssRiP~V~~~l~~~f-g~~~~ 357 (668)
T PRK13410 279 PFITATEDGPKHIETRLDRKQFESLCGDLLDRLLRPVKRALKDAGLSPEDIDEVVLVGGSTRMPMVQQLVRTLI-PREPN 357 (668)
T ss_pred eeeecCCCCCeeEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCccccHHHHHHHHHHc-CCCcc
Confidence 988754 4789999999999999999999999999999999999999999999999999999999999999 57788
Q ss_pred CCCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEEE
Q psy7639 2301 LSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTI 2380 (2568)
Q Consensus 2301 ~~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~i 2380 (2568)
.++|||||||+|||+||+++++ .++++.+.|++|++||+++.+|.+.+|||||++||++++.+|+|..|||+.+.|
T Consensus 358 ~~~npdeaVA~GAAi~aa~ls~----~~~~~~l~Dv~p~slgie~~~g~~~~li~rnt~iP~~~~~~f~t~~dnq~~v~i 433 (668)
T PRK13410 358 QNVNPDEVVAVGAAIQAGILAG----ELKDLLLLDVTPLSLGLETIGGVMKKLIPRNTTIPVRRSDVFSTSENNQSSVEI 433 (668)
T ss_pred cCCCCchHHHHhHHHHHHhhcc----cccceeEEeeccccccceecCCeeEEEEeCCCcccccccccceeccCCCcEEEE
Confidence 9999999999999999999998 578999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHHH
Q psy7639 2381 QVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMIN 2460 (2568)
Q Consensus 2381 ~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~~ 2460 (2568)
+|||||+.++.+|..||+|.|+|+||+|+|.++|+|+|++|.||+|+|++.++.||++..++|... .+||++++++|++
T Consensus 434 ~v~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~I~v~f~id~nGiL~V~a~d~~tg~~~~~~i~~~-~~ls~~ei~~~~~ 512 (668)
T PRK13410 434 HVWQGEREMASDNKSLGRFKLSGIPPAPRGVPQVQVAFDIDANGILQVSATDRTTGREQSVTIQGA-STLSEQEVNRMIQ 512 (668)
T ss_pred EEEeeccccccCCceEEEEEEeCCCCCCCCCCeEEEEEEECCCcEEEEEEEEcCCCceeeeeeccc-ccCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999988765 6799999999999
Q ss_pred HHHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhhh----ccCCCCHHHHHHHHHHHHHHHHHhhcCC-ccCHHHHHHHHH
Q psy7639 2461 DAERYKDEDERQKERISARNNLEAYVFNVKQALDN----AGNKLTESEKSRCREECDATLKWLDNNT-LADKEEYQDKLQ 2535 (2568)
Q Consensus 2461 ~~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~~----~~~~l~~~ek~~i~~~l~e~~~WL~~~~-~a~~ee~~~k~~ 2535 (2568)
++.+|.++|+.+++++++||++|+|+|++|++|.+ +...+++++|++++..|++.++||++++ ..-++.|+++++
T Consensus 513 ~~~~~~~~d~~~~~~~e~kn~~e~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~wL~~~~~~~~~~~~~~~~~ 592 (668)
T PRK13410 513 EAEAKADEDRRRRERIEKRNRALTLIAQAERRLRDAALEFGPYFAERQRRAVESAMRDVQDSLEQDDDRELDLAVADLQE 592 (668)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999975 3378899999999999999999998753 334556777788
Q ss_pred HHHHHHHHHHHHHhc
Q psy7639 2536 QLQKSCMPLMSKMHG 2550 (2568)
Q Consensus 2536 ~L~~~~~pi~~r~~e 2550 (2568)
+|..+..|+..|..+
T Consensus 593 ~l~~~~~~~~~~~~~ 607 (668)
T PRK13410 593 ALYGLNREVRAEYKE 607 (668)
T ss_pred HHHHHHHHHHHHHhh
Confidence 888888888777777
No 11
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=100.00 E-value=1.4e-95 Score=983.31 Aligned_cols=550 Identities=51% Similarity=0.824 Sum_probs=523.4
Q ss_pred CCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEEe-cCCCceEEEEEcCceeeeChhhhHHHHHH
Q psy7639 1986 DMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DCSKPKIQVEFKGERKTFAPEEISSMVLT 2064 (2568)
Q Consensus 1986 ~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~peei~a~iL~ 2064 (2568)
++++||.+|++++.+||+||++++|||||++|+|+.++...++|||.++. .+|.+.+.+ .+ +.|+||||+||+|+
T Consensus 85 ~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~~~~~~~~~p~~~~~~~~~~~~~~~--~~--~~~speel~a~iL~ 160 (663)
T PTZ00400 85 GQRLVGIVAKRQAVTNPENTVFATKRLIGRRYDEDATKKEQKILPYKIVRASNGDAWIEA--QG--KKYSPSQIGAFVLE 160 (663)
T ss_pred CCEEECHHHHHhHHhCCcceehhhhhhcCCCcCcHHHHhhhccCCeEEEecCCCceEEEE--CC--EEECHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999984 556565554 33 68999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCeee
Q psy7639 2065 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTF 2144 (2568)
Q Consensus 2065 ~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt~ 2144 (2568)
+||+.|+.++|.+|++|||||||||++.||+||++||++|||+|++|||||||||++||+.+. .++++||||||||||
T Consensus 161 ~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EptAAAlay~~~~~--~~~~vlV~DlGgGT~ 238 (663)
T PTZ00400 161 KMKETAESYLGRKVKQAVITVPAYFNDSQRQATKDAGKIAGLDVLRIINEPTAAALAFGMDKN--DGKTIAVYDLGGGTF 238 (663)
T ss_pred HHHHHHHHHhCCCCceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeCchHHHHHHhccccC--CCcEEEEEeCCCCeE
Confidence 999999999999999999999999999999999999999999999999999999999998764 468999999999999
Q ss_pred EEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcceeEEEE
Q psy7639 2145 DVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEI 2224 (2568)
Q Consensus 2145 dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~~~i 2224 (2568)
||||+++.+| .++|++++||.+|||+|||++|++||+++|+++++.|+..+++++++|+.+||+||+.||.+.++.+++
T Consensus 239 DvSv~~~~~g-~~~v~a~~gd~~LGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~~L~~~aE~aK~~LS~~~~~~i~i 317 (663)
T PTZ00400 239 DISILEILGG-VFEVKATNGNTSLGGEDFDQRILNYLIAEFKKQQGIDLKKDKLALQRLREAAETAKIELSSKTQTEINL 317 (663)
T ss_pred EEEEEEecCC-eeEEEecccCCCcCHHHHHHHHHHHHHHHhhhhcCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEE
Confidence 9999999988 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCC----cceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCCC
Q psy7639 2225 DALYDG----IDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLN 2300 (2568)
Q Consensus 2225 ~~~~~~----~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~ 2300 (2568)
++++.+ .||.++|||++||++|++++++++++|+++|+++++++++|+.|+|||||||||+||++|+++| ++++.
T Consensus 318 ~~~~~d~~g~~~~~~~itR~efe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~f-~~~~~ 396 (663)
T PTZ00400 318 PFITADQSGPKHLQIKLSRAKLEELTHDLLKKTIEPCEKCIKDAGVKKDELNDVILVGGMTRMPKVSETVKKIF-GKEPS 396 (663)
T ss_pred EeeccCCCCceEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCccCChHHHHHHHHHh-CCCcc
Confidence 988754 5899999999999999999999999999999999999999999999999999999999999999 46788
Q ss_pred CCCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEEE
Q psy7639 2301 LSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTI 2380 (2568)
Q Consensus 2301 ~~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~i 2380 (2568)
.++|||||||+|||+||+++++ .++++.+.|++|+++|++..+|.|.++||||++||++++.+|+|..|+|+.+.|
T Consensus 397 ~~~npdeaVA~GAAi~aa~l~~----~~~~~~~~dv~p~slgi~~~~g~~~~ii~~~t~iP~~~~~~f~~~~d~q~~~~i 472 (663)
T PTZ00400 397 KGVNPDEAVAMGAAIQAGVLKG----EIKDLLLLDVTPLSLGIETLGGVFTRLINRNTTIPTKKSQVFSTAADNQTQVGI 472 (663)
T ss_pred cCCCCccceeeccHHHHHhhcC----CccceEEEeccccceEEEecCCeeEEEEecCccCCccceeeeeeccCCCceEEE
Confidence 9999999999999999999998 468899999999999999999999999999999999999999999999999999
Q ss_pred EEeecCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHHH
Q psy7639 2381 QVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMIN 2460 (2568)
Q Consensus 2381 ~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~~ 2460 (2568)
+||||++..+.+|..||+|.|.|+||+|.|.++|+|+|.+|.||+|+|++.++.||+...++|+.. .+||.++++++++
T Consensus 473 ~i~ege~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~~~~~~~~~i~~~-~~ls~~ei~~~~~ 551 (663)
T PTZ00400 473 KVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDVDANGIMNISAVDKSTGKKQEITIQSS-GGLSDEEIEKMVK 551 (663)
T ss_pred EEEEecCccCCcCceeEEEEEcCCCCCCCCCceEEEEEEECCCCCEEEEEEeccCCcEEEEEeecc-ccccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998865 5799999999999
Q ss_pred HHHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHH
Q psy7639 2461 DAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKS 2540 (2568)
Q Consensus 2461 ~~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~~~~~~l~~~ek~~i~~~l~e~~~WL~~~~~a~~ee~~~k~~~L~~~ 2540 (2568)
++.+|+++|+.++++.+++|+||+|+|++|+.|.++...+++++++++++.+++.++||+++ +.++|++++++|+++
T Consensus 552 ~~~~~~~~D~~~~~~~eakN~lEs~iy~~r~~l~e~~~~~s~~ere~i~~~l~~~~~WL~~~---d~~~i~~k~~eL~~~ 628 (663)
T PTZ00400 552 EAEEYKEQDEKKKELVDAKNEAETLIYSVEKQLSDLKDKISDADKDELKQKITKLRSTLSSE---DVDSIKDKTKQLQEA 628 (663)
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987668999999999999999999999975 588999999999999
Q ss_pred HHHHHHHHhcC
Q psy7639 2541 CMPLMSKMHGG 2551 (2568)
Q Consensus 2541 ~~pi~~r~~e~ 2551 (2568)
+.++..++|+.
T Consensus 629 l~~l~~k~y~~ 639 (663)
T PTZ00400 629 SWKISQQAYKQ 639 (663)
T ss_pred HHHHHHHHHhh
Confidence 99999998864
No 12
>PLN03184 chloroplast Hsp70; Provisional
Probab=100.00 E-value=3e-95 Score=979.92 Aligned_cols=553 Identities=47% Similarity=0.778 Sum_probs=520.9
Q ss_pred CCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEEe-cCCCceEEEEEcCceeeeChhhhHHHHHH
Q psy7639 1986 DMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DCSKPKIQVEFKGERKTFAPEEISSMVLT 2064 (2568)
Q Consensus 1986 ~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~peei~a~iL~ 2064 (2568)
++++||++|++++.+||.||++++|||||++|+| ++...+.|||.++. .+|...+.+...+ ..|+|+||++|+|+
T Consensus 83 ~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d--~~~~~~~~~~~v~~~~~~~v~~~~~~~~--~~~speei~a~iL~ 158 (673)
T PLN03184 83 GDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSE--VDEESKQVSYRVVRDENGNVKLDCPAIG--KQFAAEEISAQVLR 158 (673)
T ss_pred CCEEECHHHHHhhhhCchhhhHHHHHhhCCCcch--hhhhhhcCCeEEEecCCCcEEEEEecCC--eEEcHHHHHHHHHH
Confidence 4689999999999999999999999999999987 56678889999984 4566666554433 68999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCeee
Q psy7639 2065 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTF 2144 (2568)
Q Consensus 2065 ~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt~ 2144 (2568)
+||+.|+.++|.+|.+||||||+||++.||+||++||++|||+|++||||||||||+||+.+. .++++||||||||||
T Consensus 159 ~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EPtAAAlayg~~~~--~~~~vlV~DlGgGT~ 236 (673)
T PLN03184 159 KLVDDASKFLNDKVTKAVITVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFEKK--SNETILVFDLGGGTF 236 (673)
T ss_pred HHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHCCCCeEEEeCcHHHHHHHhhcccC--CCCEEEEEECCCCeE
Confidence 999999999999999999999999999999999999999999999999999999999998764 467899999999999
Q ss_pred EEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcceeEEEE
Q psy7639 2145 DVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEI 2224 (2568)
Q Consensus 2145 dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~~~i 2224 (2568)
||||+++.+| .++|++++||.+|||+|||+.|++|+.++|+++++.|+..+++++.||+.+||+||+.||.+.++.+++
T Consensus 237 DvSi~~~~~~-~~eVla~~gd~~LGG~dfD~~L~~~~~~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~~~i~i 315 (673)
T PLN03184 237 DVSVLEVGDG-VFEVLSTSGDTHLGGDDFDKRIVDWLASNFKKDEGIDLLKDKQALQRLTEAAEKAKIELSSLTQTSISL 315 (673)
T ss_pred EEEEEEecCC-EEEEEEecCCCccCHHHHHHHHHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHHHhcCCCCcceEEE
Confidence 9999999988 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccC----CcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCCC
Q psy7639 2225 DALYD----GIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLN 2300 (2568)
Q Consensus 2225 ~~~~~----~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~ 2300 (2568)
+++.. +.++..+|||++||++|+++++++..+|+++|++++++++||+.|+|||||||||+||++|+++| ++++.
T Consensus 316 ~~~~~~~~g~~~~~~~itR~~fe~l~~~l~~r~~~~i~~~L~~a~~~~~dId~ViLvGGssriP~V~~~i~~~f-g~~~~ 394 (673)
T PLN03184 316 PFITATADGPKHIDTTLTRAKFEELCSDLLDRCKTPVENALRDAKLSFKDIDEVILVGGSTRIPAVQELVKKLT-GKDPN 394 (673)
T ss_pred EeeeccCCCCceEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHccEEEEECCccccHHHHHHHHHHh-CCCcc
Confidence 87753 36899999999999999999999999999999999999999999999999999999999999999 57788
Q ss_pred CCCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEEE
Q psy7639 2301 LSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTI 2380 (2568)
Q Consensus 2301 ~~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~i 2380 (2568)
.++|||||||+|||+||++|++ +++++.+.|++|++||++..+|.+.++||||++||++++++|+|..|+|+.+.|
T Consensus 395 ~~~npdeaVA~GAAi~aa~ls~----~~~~~~~~dv~p~slgi~~~~~~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i 470 (673)
T PLN03184 395 VTVNPDEVVALGAAVQAGVLAG----EVSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEI 470 (673)
T ss_pred cccCcchHHHHHHHHHHHHhcc----CccceEEEecccccceEEecCCeeEEEEeCCCccceecceEeeeecCCCcEEEE
Confidence 9999999999999999999998 577899999999999999999999999999999999999999999999999999
Q ss_pred EEeecCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHHH
Q psy7639 2381 QVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMIN 2460 (2568)
Q Consensus 2381 ~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~~ 2460 (2568)
+|||||+..+.+|..||+|.|+++||+|+|.++|+|+|.+|.||+|+|++.++.|+++..++|... .+||++++++|++
T Consensus 471 ~i~~ge~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~id~~GiL~V~a~~~~t~~~~~~~i~~~-~~ls~eei~~~~~ 549 (673)
T PLN03184 471 NVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSATDKGTGKKQDITITGA-STLPKDEVERMVQ 549 (673)
T ss_pred EEEeecccccccCceEEEEEEeCCCCCCCCCceEEEEEEeCCCCeEEEEEEecCCCeEEEEEeccc-ccccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998864 6799999999999
Q ss_pred HHHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHH
Q psy7639 2461 DAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKS 2540 (2568)
Q Consensus 2461 ~~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~~~~~~l~~~ek~~i~~~l~e~~~WL~~~~~a~~ee~~~k~~~L~~~ 2540 (2568)
++.+++.+|+.++++++++|+||+|||++|+.|.++...+++++++++++.|++.++||+++ +.+++++++++|.+.
T Consensus 550 ~~~~~~~~D~~~~~~~eakN~lE~~iy~~r~~l~e~~~~~~~eer~~l~~~l~~~e~wL~~~---d~~~ik~~~~~l~~~ 626 (673)
T PLN03184 550 EAEKFAKEDKEKRDAVDTKNQADSVVYQTEKQLKELGDKVPADVKEKVEAKLKELKDAIASG---STQKMKDAMAALNQE 626 (673)
T ss_pred HHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999986668899999999999999999999975 578999999999999
Q ss_pred HHHHHHHHhcCCCC
Q psy7639 2541 CMPLMSKMHGGASA 2554 (2568)
Q Consensus 2541 ~~pi~~r~~e~~g~ 2554 (2568)
+.++..++|.++|+
T Consensus 627 l~~l~~~~~~~~~~ 640 (673)
T PLN03184 627 VMQIGQSLYNQPGA 640 (673)
T ss_pred HHHHHHHHHhcCCC
Confidence 99999998876443
No 13
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=100.00 E-value=1.2e-93 Score=954.51 Aligned_cols=609 Identities=45% Similarity=0.702 Sum_probs=560.4
Q ss_pred HHHhcccccEEEEEEcccccc--cccCCcccccccccchh---hhhHHHHhhhcCCCccccccccccccccCChhhhhcc
Q psy7639 1379 KERISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRCRE---ECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDM 1453 (2568)
Q Consensus 1379 ~~~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~~~---~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~~ 1453 (2568)
...||||||++|+|.++.+.+ |..|.++|||+|+|... +|+.|++++..||.+|++++||+||+.++|+.++..+
T Consensus 31 GIDLGTTnS~vA~~~~~~~~ii~n~~g~r~tPS~V~f~~~~~lvG~~Ak~~~~~~p~~ti~~~KRliG~~~~d~~v~~~~ 110 (657)
T PTZ00186 31 GVDLGTTYSCVATMDGDKARVLENSEGFRTTPSVVAFKGSEKLVGLAAKRQAITNPQSTFYAVKRLIGRRFEDEHIQKDI 110 (657)
T ss_pred EEEeCcCeEEEEEEeCCceEEeecCCCCcccceEEEECCCCEEEcHHHHHhhhhCchhHHHHHHHHhccccccHHHHHhh
Confidence 346999999999999988777 89999999999999644 6999999999999999999999999999999999999
Q ss_pred cccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCC
Q psy7639 1454 KHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGL 1533 (2568)
Q Consensus 1454 k~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL 1533 (2568)
+.|||.++....+ ...+.. ..++.|+|+||++++|++||+.|+.++|.++.++||||||||++.||++|++||++|||
T Consensus 111 ~~~p~~vv~~~~~-~~~i~~-~~~~~~speeisa~iL~~Lk~~Ae~~lg~~v~~aVITVPayF~~~qR~at~~Aa~~AGl 188 (657)
T PTZ00186 111 KNVPYKIVRAGNG-DAWVQD-GNGKQYSPSQIGAFVLEKMKETAENFLGHKVSNAVVTCPAYFNDAQRQATKDAGTIAGL 188 (657)
T ss_pred ccCcEEEEEcCCC-ceEEEe-CCCeEEcHHHHHHHHHHHHHHHHHHHhCCccceEEEEECCCCChHHHHHHHHHHHHcCC
Confidence 9999999875433 233332 34688999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHH
Q psy7639 1534 NVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFK 1613 (2568)
Q Consensus 1534 ~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~ 1613 (2568)
++++||+||||||++|+.+.. .++++||||||||||||||+++.+| .++|+++.||.+|||+|||++|++|+.++|.
T Consensus 189 ~v~rlInEPtAAAlayg~~~~--~~~~vlV~DlGGGT~DvSil~~~~g-~~~V~at~Gd~~LGG~DfD~~l~~~~~~~f~ 265 (657)
T PTZ00186 189 NVIRVVNEPTAAALAYGMDKT--KDSLIAVYDLGGGTFDISVLEIAGG-VFEVKATNGDTHLGGEDFDLALSDYILEEFR 265 (657)
T ss_pred CeEEEEcChHHHHHHHhccCC--CCCEEEEEECCCCeEEEEEEEEeCC-EEEEEEecCCCCCCchhHHHHHHHHHHHHHh
Confidence 999999999999999998653 4678999999999999999999777 8999999999999999999999999999999
Q ss_pred hhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccC---C-cceeeecCHHHHHHHHhHHHHHHHHHHHHHHH
Q psy7639 1614 RKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYD---G-IDFYTKISRARFEELCSDLFRSTLQPVEKALQ 1689 (2568)
Q Consensus 1614 ~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~---~-~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~ 1689 (2568)
++++.++..++..+.+|+.+||+||+.||....+.+.++.... | .++..+|||++|+++|+|++++++.+++++|+
T Consensus 266 ~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~~~i~i~~i~~~~~g~~~~~~~ItR~efe~l~~~l~~r~~~~v~~~L~ 345 (657)
T PTZ00186 266 KTSGIDLSKERMALQRVREAAEKAKCELSSAMETEVNLPFITANADGAQHIQMHISRSKFEGITQRLIERSIAPCKQCMK 345 (657)
T ss_pred hhcCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEeeeccCCCCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888888999999999999999999999999998886543 2 45888999999999999999999999999999
Q ss_pred HcCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeecccccc
Q psy7639 1690 DAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLG 1769 (2568)
Q Consensus 1690 ~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slG 1769 (2568)
++++.+.+|+.|+||||+||||.||++|+++|+ +.+...+||++|||+|||+||+++++. ++++++.|++|++||
T Consensus 346 ~a~~~~~dId~VvLVGGssriP~V~~~l~~~fg-~~~~~~~nPdeaVA~GAAi~a~~l~~~----~~~~~l~Dv~p~slg 420 (657)
T PTZ00186 346 DAGVELKEINDVVLVGGMTRMPKVVEEVKKFFQ-KDPFRGVNPDEAVALGAATLGGVLRGD----VKGLVLLDVTPLSLG 420 (657)
T ss_pred HcCCChhhCCEEEEECCcccChHHHHHHHHHhC-CCccccCCCchHHHHhHHHHHHHhccc----cCceEEEeecccccc
Confidence 999999999999999999999999999999995 556678999999999999999999874 467899999999999
Q ss_pred eeecCcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcC
Q psy7639 1770 IETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDA 1849 (2568)
Q Consensus 1770 ie~~~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~ 1849 (2568)
|++.+|.|.+||||||+||+++++.|+|..|||+.+.|+|||||+.++.+|..||+|.|.++||.|+|.++|+|+|+||.
T Consensus 421 ie~~~g~~~~iI~rnt~iP~~~~~~f~t~~dnQ~~v~i~i~qGe~~~~~~n~~lg~~~l~~ip~~~~G~~~I~Vtf~iD~ 500 (657)
T PTZ00186 421 IETLGGVFTRMIPKNTTIPTKKSQTFSTAADNQTQVGIKVFQGEREMAADNQMMGQFDLVGIPPAPRGVPQIEVTFDIDA 500 (657)
T ss_pred ceecCCEEEEEEeCCCEeeEEEeeccccccCCCceEEEEEEEecccccccccccceEEEcCCCCCCCCCCcEEEEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCH
Q psy7639 1850 NGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTE 1929 (2568)
Q Consensus 1850 nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~~~~~~~~ 1929 (2568)
||+|+|+|++..||++.+++|.++ +.||++||++|+++++.++.+|+.++++++++|+++.+++.++..+++. ..++.
T Consensus 501 nGiL~V~a~d~~tg~~~~~~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 578 (657)
T PTZ00186 501 NGICHVTAKDKATGKTQNITITAN-GGLSKEQIEQMIRDSEQHAEADRVKRELVEVRNNAETQLTTAERQLGEW-KYVSD 578 (657)
T ss_pred CCEEEEEEEEccCCcEEEEEeccC-ccCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccCCH
Confidence 999999999999999999999864 5699999999999999999999999999999999999999999999764 56899
Q ss_pred HHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhcccccccCCCCCCCCCCCCChhHHHHhhhhc
Q psy7639 1930 SEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGGASAGDMPRGGDAAKNQVAM 2000 (2568)
Q Consensus 1930 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~~~~~~G~~A~~~~~~ 2000 (2568)
++++.+...++.+++||+.+ ..+.+.|++++++|++.+.++..++|++++++.+|...--|+...+|...
T Consensus 579 ~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (657)
T PTZ00186 579 AEKENVKTLVAELRKAMENP-NVAKDDLAAATDKLQKAVMECGRTEYQQAAAANSGSSSNSGEQQQQQQQQ 648 (657)
T ss_pred HHHHHHHHHHHHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCchHHHHHHHHH
Confidence 99999999999999999843 34679999999999999999999998877777777666667766555443
No 14
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=100.00 E-value=1.1e-92 Score=959.26 Aligned_cols=549 Identities=53% Similarity=0.849 Sum_probs=521.1
Q ss_pred CCCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEEe-cCCCceEEEEEcCceeeeChhhhHHHHH
Q psy7639 1985 GDMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DCSKPKIQVEFKGERKTFAPEEISSMVL 2063 (2568)
Q Consensus 1985 ~~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~peei~a~iL 2063 (2568)
++++++|++|+.++.+||.+|++++|||||++ ++.++.+.++|||.++. .+|...+.+ .+ +.|+||+|+||+|
T Consensus 45 ~~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~--~~--~~~~peel~a~iL 118 (627)
T PRK00290 45 DGERLVGQPAKRQAVTNPENTIFSIKRLMGRR--DEEVQKDIKLVPYKIVKADNGDAWVEI--DG--KKYTPQEISAMIL 118 (627)
T ss_pred CCCEEEcHHHHHhhhhCchhhHHHHHHHhCCC--chHHHHHhhcCCeEEEEcCCCceEEEE--CC--EEEcHHHHHHHHH
Confidence 45789999999999999999999999999999 67788899999999985 455555544 34 6899999999999
Q ss_pred HHHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCee
Q psy7639 2064 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGT 2143 (2568)
Q Consensus 2064 ~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt 2143 (2568)
++||+.|+.++|.++.+|||||||||++.||+||++||++|||+|++|||||||||++||+.+. .++++|||||||||
T Consensus 119 ~~lk~~ae~~~g~~v~~~VItVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EptAAAl~y~~~~~--~~~~vlV~D~GggT 196 (627)
T PRK00290 119 QKLKKDAEDYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKK--GDEKILVYDLGGGT 196 (627)
T ss_pred HHHHHHHHHHhCCCCceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecchHHHHHHhhhccC--CCCEEEEEECCCCe
Confidence 9999999999999999999999999999999999999999999999999999999999998764 46899999999999
Q ss_pred eEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcceeEEE
Q psy7639 2144 FDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIE 2223 (2568)
Q Consensus 2144 ~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~~~ 2223 (2568)
|||||+++.++ .++|++++||.+|||+|||++|++|+.++|+++++.|++.+++++.||+.+||+||+.||.+.++.++
T Consensus 197 ~dvsv~~~~~~-~~~vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~ae~aK~~LS~~~~~~i~ 275 (627)
T PRK00290 197 FDVSILEIGDG-VFEVLSTNGDTHLGGDDFDQRIIDYLADEFKKENGIDLRKDKMALQRLKEAAEKAKIELSSAQQTEIN 275 (627)
T ss_pred EEEEEEEEeCC-eEEEEEecCCCCcChHHHHHHHHHHHHHHHHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 99999999988 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecccCC----cceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCC
Q psy7639 2224 IDALYDG----IDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSL 2299 (2568)
Q Consensus 2224 i~~~~~~----~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~ 2299 (2568)
+++++.+ .++.++|||++||++|+++++++.++|+++|+++++++.+|+.|+|||||||||+||+.|+++| ++++
T Consensus 276 i~~~~~d~~g~~~~~~~itR~~fe~l~~~l~~~~~~~i~~~l~~a~~~~~~id~ViLvGGssriP~v~~~l~~~f-g~~~ 354 (627)
T PRK00290 276 LPFITADASGPKHLEIKLTRAKFEELTEDLVERTIEPCKQALKDAGLSVSDIDEVILVGGSTRMPAVQELVKEFF-GKEP 354 (627)
T ss_pred EeecccCCCCCeEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcCCChHHHHHHHHHh-CCCC
Confidence 9988753 6899999999999999999999999999999999999999999999999999999999999999 6778
Q ss_pred CCCCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEE
Q psy7639 2300 NLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVT 2379 (2568)
Q Consensus 2300 ~~~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~ 2379 (2568)
..++|||||||+|||++|+.+++ +++++.+.|++|+++|+++.+|.+.+|||||++||++++++|+|..|+|+.+.
T Consensus 355 ~~~~npdeava~GAa~~aa~l~~----~~~~~~~~d~~~~slgi~~~~~~~~~ii~~~t~~P~~~~~~f~~~~d~q~~~~ 430 (627)
T PRK00290 355 NKGVNPDEVVAIGAAIQGGVLAG----DVKDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAADNQPAVT 430 (627)
T ss_pred CcCcCChHHHHHhHHHHHHHhcC----CccceeeeeccceEEEEEecCCeEEEEecCCCcCCccceEEEEecCCCcceEE
Confidence 89999999999999999999998 57889999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHH
Q psy7639 2380 IQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMI 2459 (2568)
Q Consensus 2380 i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~ 2459 (2568)
|+||||++..+.+|..||+|.|+++|++|+|.++|+|+|++|.||+|+|++.+..||+..++++... .+||++++++++
T Consensus 431 i~v~~ge~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~f~~d~~gil~v~a~~~~~~~~~~~~i~~~-~~ls~e~i~~~~ 509 (627)
T PRK00290 431 IHVLQGEREMAADNKSLGRFNLTGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGKEQSITITAS-SGLSDEEIERMV 509 (627)
T ss_pred EEEEEecccccCcCceEEEEEECCCCCCCCCCceEEEEEEECCCceEEEEEEEccCCceeEEEeccc-cccCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998765 579999999999
Q ss_pred HHHHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHH
Q psy7639 2460 NDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQK 2539 (2568)
Q Consensus 2460 ~~~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~~~~~~l~~~ek~~i~~~l~e~~~WL~~~~~a~~ee~~~k~~~L~~ 2539 (2568)
+++.++.++|+..+++.+++|+||+|+|.+|+.|++....+++++|+++++.|++.++||+++ +.++|++++++|++
T Consensus 510 ~~~~~~~~~d~~~~~~~eakN~le~~i~~~~~~l~~~~~~~~~~e~~~i~~~l~~~~~wL~~~---~~~~i~~k~~~L~~ 586 (627)
T PRK00290 510 KDAEANAEEDKKRKELVEARNQADSLIYQTEKTLKELGDKVPADEKEKIEAAIKELKEALKGE---DKEAIKAKTEELTQ 586 (627)
T ss_pred HHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999986668899999999999999999999975 68899999999999
Q ss_pred HHHHHHHHHhcC
Q psy7639 2540 SCMPLMSKMHGG 2551 (2568)
Q Consensus 2540 ~~~pi~~r~~e~ 2551 (2568)
++.|+..|++++
T Consensus 587 ~~~~~~~~~~~~ 598 (627)
T PRK00290 587 ASQKLGEAMYQQ 598 (627)
T ss_pred HHHHHHHHHHhh
Confidence 999999999863
No 15
>CHL00094 dnaK heat shock protein 70
Probab=100.00 E-value=1e-91 Score=945.82 Aligned_cols=549 Identities=51% Similarity=0.806 Sum_probs=518.0
Q ss_pred CCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEEe-cCCCceEEEEEcCceeeeChhhhHHHHHH
Q psy7639 1986 DMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DCSKPKIQVEFKGERKTFAPEEISSMVLT 2064 (2568)
Q Consensus 1986 ~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~peei~a~iL~ 2064 (2568)
+++++|++|++++.+||+||++++||+||++++| ++...+.|||.++. .+|.+.+.+...+ ..|+|+||++|+|+
T Consensus 46 ~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~~--~~~~~~~~~~~v~~~~~g~i~~~~~~~~--~~~s~eei~a~iL~ 121 (621)
T CHL00094 46 GDLLVGQIAKRQAVINPENTFYSVKRFIGRKFSE--ISEEAKQVSYKVKTDSNGNIKIECPALN--KDFSPEEISAQVLR 121 (621)
T ss_pred CCEEECHHHHHhHHhCccceehhhHHhcCCChHH--HHhhhhcCCeEEEECCCCCEEEEEecCC--eEEcHHHHHHHHHH
Confidence 5789999999999999999999999999999976 56667889999984 4566666654333 68999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCeee
Q psy7639 2065 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTF 2144 (2568)
Q Consensus 2065 ~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt~ 2144 (2568)
+|++.|+.++|.++.+||||||+||++.||+||++||++|||+|++|||||||||++||++.. .+.++||||||||||
T Consensus 122 ~l~~~ae~~lg~~v~~~VItVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EptAAAlay~~~~~--~~~~vlV~DlGgGT~ 199 (621)
T CHL00094 122 KLVEDASKYLGETVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKK--NNETILVFDLGGGTF 199 (621)
T ss_pred HHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHHhccccC--CCCEEEEEEcCCCeE
Confidence 999999999999999999999999999999999999999999999999999999999998764 467899999999999
Q ss_pred EEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcceeEEEE
Q psy7639 2145 DVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEI 2224 (2568)
Q Consensus 2145 dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~~~i 2224 (2568)
||||+++.+| .++|++++||.+|||+|||+.|++|++++|+++++.|+..+++++.+|+.+||+||+.||.+.++.+.+
T Consensus 200 DvSv~~~~~~-~~~vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~~~~i~i 278 (621)
T CHL00094 200 DVSILEVGDG-VFEVLSTSGDTHLGGDDFDKKIVNWLIKEFKKKEGIDLSKDRQALQRLTEAAEKAKIELSNLTQTEINL 278 (621)
T ss_pred EEEEEEEcCC-EEEEEEEecCCCcChHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence 9999999988 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccCC----cceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCCC
Q psy7639 2225 DALYDG----IDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLN 2300 (2568)
Q Consensus 2225 ~~~~~~----~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~ 2300 (2568)
++++++ .++..+|||++||++|+++++++..+|+++|+++++++.+|+.|+||||+||||.||+.|+++|| +++.
T Consensus 279 ~~~~~~~~g~~~~~~~itR~~fe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~fg-~~~~ 357 (621)
T CHL00094 279 PFITATQTGPKHIEKTLTRAKFEELCSDLINRCRIPVENALKDAKLDKSDIDEVVLVGGSTRIPAIQELVKKLLG-KKPN 357 (621)
T ss_pred eecccCCCCCeeEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCccCChHHHHHHHHHhC-CCcC
Confidence 987642 57999999999999999999999999999999999999999999999999999999999999994 6788
Q ss_pred CCCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEEE
Q psy7639 2301 LSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTI 2380 (2568)
Q Consensus 2301 ~~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~i 2380 (2568)
.++|||||||+|||+||+++++ .++++.+.|++|++||++..+|.+.++||||++||++++++|+|..|+|+.+.|
T Consensus 358 ~~~~pdeava~GAA~~aa~ls~----~~~~~~~~d~~~~~lgi~~~~~~~~~ii~~~t~iP~~~~~~~~~~~~~q~~v~i 433 (621)
T CHL00094 358 QSVNPDEVVAIGAAVQAGVLAG----EVKDILLLDVTPLSLGVETLGGVMTKIIPRNTTIPTKKSEVFSTAVDNQTNVEI 433 (621)
T ss_pred cCCCchhHHHhhhHHHHHHhcC----CccceeeeeeeceeeeeeccCCEEEEEEeCCCccceeeeEEEEeccCCCcEEEE
Confidence 9999999999999999999998 468899999999999999999999999999999999999999999999999999
Q ss_pred EEeecCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHHH
Q psy7639 2381 QVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMIN 2460 (2568)
Q Consensus 2381 ~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~~ 2460 (2568)
+|||||+..+.+|..||+|.|.|+|++++|.++|+|+|++|.||+|+|++.++.||+...+++.+. .+||+++++++++
T Consensus 434 ~i~~ge~~~~~~n~~lg~~~i~~~~~~~~g~~~i~v~f~id~~Gil~v~~~~~~t~~~~~~~i~~~-~~ls~~~i~~~~~ 512 (621)
T CHL00094 434 HVLQGERELAKDNKSLGTFRLDGIPPAPRGVPQIEVTFDIDANGILSVTAKDKGTGKEQSITIQGA-STLPKDEVERMVK 512 (621)
T ss_pred EEEeeccccCCCCCEEEEEEEeCCCCCCCCCCcEEEEEEECCCCeEEEEEeeccCCceeeeeeccc-hhccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998888754 5799999999999
Q ss_pred HHHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHH
Q psy7639 2461 DAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKS 2540 (2568)
Q Consensus 2461 ~~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~~~~~~l~~~ek~~i~~~l~e~~~WL~~~~~a~~ee~~~k~~~L~~~ 2540 (2568)
++.++..+|+..+++.+++|+||+|+|.+|++|++....+++++|+++++.+++.++||+++ +.++|++++++|++.
T Consensus 513 ~~~~~~~~d~~~~~~~~~kn~le~~i~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~wl~~~---~~~~~~~~~~~l~~~ 589 (621)
T CHL00094 513 EAEKNAAEDKEKREKIDLKNQAESLCYQAEKQLKELKDKISEEKKEKIENLIKKLRQALQND---NYESIKSLLEELQKA 589 (621)
T ss_pred HHHHhhhcchhHHHHHHHHHHhHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999986557899999999999999999999975 468999999999999
Q ss_pred HHHHHHHHhc
Q psy7639 2541 CMPLMSKMHG 2550 (2568)
Q Consensus 2541 ~~pi~~r~~e 2550 (2568)
+.|+..+++.
T Consensus 590 ~~~~~~kl~~ 599 (621)
T CHL00094 590 LMEIGKEVYS 599 (621)
T ss_pred HHHHHHHHHh
Confidence 9999999887
No 16
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=100.00 E-value=4.6e-91 Score=941.98 Aligned_cols=547 Identities=55% Similarity=0.858 Sum_probs=518.8
Q ss_pred CCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEEecCCCceEEEEEcCceeeeChhhhHHHHHHH
Q psy7639 1986 DMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTK 2065 (2568)
Q Consensus 1986 ~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~peei~a~iL~~ 2065 (2568)
+++++|.+|++++.+||++|++++|||||++++ .++...+++||.+..++|.+.+.+. + +.|+||+|+||+|++
T Consensus 44 ~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG~~~~--~~~~~~~~~~~~v~~~~~~~~~~v~--~--~~~~peel~a~~L~~ 117 (595)
T TIGR02350 44 GERLVGQPAKRQAVTNPENTIYSIKRFMGRRFD--EVTEEAKRVPYKVVGDGGDVRVKVD--G--KEYTPQEISAMILQK 117 (595)
T ss_pred CCEEECHHHHHhhhhCchhhhHHHHHHhCCCch--HHHHHhhcCCeeEEcCCCceEEEEC--C--EEecHHHHHHHHHHH
Confidence 478999999999999999999999999999994 4777889999997777777776663 3 689999999999999
Q ss_pred HHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCeeeE
Q psy7639 2066 MKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFD 2145 (2568)
Q Consensus 2066 lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt~d 2145 (2568)
||+.|+.++|.++.+||||||+||++.||+||++||++|||+|++|||||||||++||+.+. ..++++|||||||||||
T Consensus 118 l~~~a~~~~~~~v~~~VItVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EptAAAl~y~~~~~-~~~~~vlV~D~Gggt~d 196 (595)
T TIGR02350 118 LKKDAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGLDKS-KKDEKILVFDLGGGTFD 196 (595)
T ss_pred HHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecchHHHHHHHhhccc-CCCcEEEEEECCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999998763 24789999999999999
Q ss_pred EEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcceeEEEEe
Q psy7639 2146 VSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEID 2225 (2568)
Q Consensus 2146 vsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~~~i~ 2225 (2568)
|||+++.+| .++|++++||.+|||+|||++|++||.++|+++++.|++.+++++.||+.+||+||+.||.+.++.++++
T Consensus 197 vsv~~~~~~-~~~v~~~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~ 275 (595)
T TIGR02350 197 VSILEIGDG-VFEVLSTAGDTHLGGDDFDQRIIDWLADEFKKEEGIDLSKDKMALQRLKEAAEKAKIELSSVLSTEINLP 275 (595)
T ss_pred EEEEEecCC-eEEEEEecCCcccCchhHHHHHHHHHHHHHHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEee
Confidence 999999988 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCC----cceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCCCC
Q psy7639 2226 ALYDG----IDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNL 2301 (2568)
Q Consensus 2226 ~~~~~----~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~~ 2301 (2568)
+++.+ .++.++|||++||++|+++++++.++++++|+++++++.+|+.|+|||||||||+||+.|+++|| .++..
T Consensus 276 ~~~~~~~g~~~~~~~itr~~fe~l~~~l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGssriP~v~~~i~~~f~-~~~~~ 354 (595)
T TIGR02350 276 FITADASGPKHLEMTLTRAKFEELTADLVERTKEPVRQALKDAGLSASDIDEVILVGGSTRIPAVQELVKDFFG-KEPNK 354 (595)
T ss_pred ecccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhHCcEEEEECCcccChHHHHHHHHHhC-CcccC
Confidence 88653 67999999999999999999999999999999999999999999999999999999999999995 78889
Q ss_pred CCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEEEE
Q psy7639 2302 SINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQ 2381 (2568)
Q Consensus 2302 ~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~i~ 2381 (2568)
++|||||||+|||++||++++ .++++.+.|++|+++|++..+|.+.++||||++||++++++|+|..|+|+.+.|+
T Consensus 355 ~~~pdeava~GAa~~aa~l~~----~~~~~~~~d~~~~~igi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~v~i~ 430 (595)
T TIGR02350 355 SVNPDEVVAIGAAIQGGVLKG----DVKDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAADNQPAVDIH 430 (595)
T ss_pred CcCcHHHHHHHHHHHHHHhcC----CcccceeeecccceeEEEecCCceEEEEeCCCcCCccceEeeeccCCCCcEEEEE
Confidence 999999999999999999998 3788999999999999999999999999999999999999999999999999999
Q ss_pred EeecCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHHHH
Q psy7639 2382 VFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMIND 2461 (2568)
Q Consensus 2382 v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~ 2461 (2568)
||||++..+.+|..||+|.|+++|+++.|.++|+|+|++|.||+|+|++.+..+|++..++++.. .+||++++++++++
T Consensus 431 i~~ge~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~f~~d~~G~l~v~~~~~~~~~~~~~~i~~~-~~ls~~~~~~~~~~ 509 (595)
T TIGR02350 431 VLQGERPMAADNKSLGRFELTGIPPAPRGVPQIEVTFDIDANGILHVSAKDKGTGKEQSITITAS-SGLSEEEIERMVKE 509 (595)
T ss_pred EEeecccccccCcEeEEEEECCCCCCCCCCceEEEEEEEcCCCeEEEEEEEccCCceEEEEeccc-cccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988875 57999999999999
Q ss_pred HHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHH
Q psy7639 2462 AERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSC 2541 (2568)
Q Consensus 2462 ~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~~~~~~l~~~ek~~i~~~l~e~~~WL~~~~~a~~ee~~~k~~~L~~~~ 2541 (2568)
+.++..+|+.++++.+++|+||+|||.+|+.|.+....+++++++++++.+++.++||+++ +.++|++++++|++++
T Consensus 510 ~~~~~~~D~~~~~~~e~kn~lEs~iy~~r~~l~~~~~~~~~~e~~~l~~~l~~~~~wL~~~---d~~~i~~~~~~l~~~~ 586 (595)
T TIGR02350 510 AEANAEEDKKRKEEIEARNNADSLAYQAEKTLKEAGDKLPAEEKEKIEKAVAELKEALKGE---DVEEIKAKTEELQQAL 586 (595)
T ss_pred HHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999976667899999999999999999999976 6789999999999999
Q ss_pred HHHHHHHh
Q psy7639 2542 MPLMSKMH 2549 (2568)
Q Consensus 2542 ~pi~~r~~ 2549 (2568)
.++..++|
T Consensus 587 ~~~~~~~~ 594 (595)
T TIGR02350 587 QKLAEAMY 594 (595)
T ss_pred HHHHHHHh
Confidence 99998875
No 17
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=100.00 E-value=8.6e-91 Score=930.18 Aligned_cols=543 Identities=41% Similarity=0.643 Sum_probs=508.6
Q ss_pred CCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEEe-cCCCceEEEEEcCceeeeChhhhHHHHHH
Q psy7639 1986 DMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DCSKPKIQVEFKGERKTFAPEEISSMVLT 2064 (2568)
Q Consensus 1986 ~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~peei~a~iL~ 2064 (2568)
++++||..|+.++.++|.+|++++|||||++++|+. . .+.+||.++. .+|.+.+.+. + ..|+|+||+|++|+
T Consensus 43 ~~~~vG~~A~~~~~~~p~~ti~~~Kr~iG~~~~d~~--~-~~~~~~~~~~~~~~~~~~~~~--~--~~~~p~ei~a~iL~ 115 (599)
T TIGR01991 43 GGVEVGKEALAAAAEDPKNTISSVKRLMGRSIEDIK--T-FSILPYRFVDGPGEMVRLRTV--Q--GTVTPVEVSAEILK 115 (599)
T ss_pred CCEEecHHHHHhhhhChhhhHHHHHHHhCCCccchh--h-cccCCEEEEEcCCCceEEEeC--C--CEEcHHHHHHHHHH
Confidence 478999999999999999999999999999998854 3 6789999874 4566666653 2 37999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCeee
Q psy7639 2065 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTF 2144 (2568)
Q Consensus 2065 ~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt~ 2144 (2568)
+||+.|++++|.++.+|||||||||++.||+||++||++|||+|++|||||||||++|++.+. .++++||||||||||
T Consensus 116 ~lk~~a~~~lg~~v~~~VItVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EPtAAAlay~~~~~--~~~~vlV~DlGgGT~ 193 (599)
T TIGR01991 116 KLKQRAEESLGGDLVGAVITVPAYFDDAQRQATKDAARLAGLNVLRLLNEPTAAAVAYGLDKA--SEGIYAVYDLGGGTF 193 (599)
T ss_pred HHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCCceEEecCHHHHHHHHhhccC--CCCEEEEEEcCCCeE
Confidence 999999999999999999999999999999999999999999999999999999999998764 468899999999999
Q ss_pred EEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcceeEEEE
Q psy7639 2145 DVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEI 2224 (2568)
Q Consensus 2145 dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~~~i 2224 (2568)
||||+++.+| .++|++++||.+|||+|||+.|++||.++ ++.+...+++++++|+.+||++|+.||.+.++.+.+
T Consensus 194 DvSi~~~~~~-~~~vla~~gd~~lGG~d~D~~l~~~l~~~----~~~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i 268 (599)
T TIGR01991 194 DVSILKLTKG-VFEVLATGGDSALGGDDFDHALAKWILKQ----LGISADLNPEDQRLLLQAARAAKEALTDAESVEVDF 268 (599)
T ss_pred EEEEEEEcCC-eEEEEEEcCCCCCCHHHHHHHHHHHHHHh----hCCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEEE
Confidence 9999999988 89999999999999999999999999964 566777899999999999999999999999999999
Q ss_pred ecccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCCCCCCC
Q psy7639 2225 DALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSIN 2304 (2568)
Q Consensus 2225 ~~~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~~~~n 2304 (2568)
+. +|.++.++|||++||++|+++++++.++|+++|+++++++.+|+.|+||||+||||+||++|+++|+ .++..++|
T Consensus 269 ~~--~g~~~~~~itr~efe~l~~~ll~~i~~~i~~~L~~a~~~~~~id~ViLvGGssriP~V~~~l~~~f~-~~~~~~~n 345 (599)
T TIGR01991 269 TL--DGKDFKGKLTRDEFEALIQPLVQKTLSICRRALRDAGLSVEEIKGVVLVGGSTRMPLVRRAVAELFG-QEPLTDID 345 (599)
T ss_pred EE--CCcEEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCCEEEEECCcCCChHHHHHHHHHhC-CCCCCCCC
Confidence 75 7899999999999999999999999999999999999999999999999999999999999999995 56778999
Q ss_pred cchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEEEEEee
Q psy7639 2305 PDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFE 2384 (2568)
Q Consensus 2305 pdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~i~v~~ 2384 (2568)
||||||+|||+||++|++ .+..+++.+.|++|++||+++.+|.+.++|||||+||++++..|+|..|+|+.+.|+|||
T Consensus 346 pdeaVA~GAai~a~~l~~--~~~~~~~~l~dv~p~slgi~~~~g~~~~ii~rnt~iP~~~~~~~~t~~d~q~~v~i~i~q 423 (599)
T TIGR01991 346 PDQVVALGAAIQADLLAG--NRIGNDLLLLDVTPLSLGIETMGGLVEKIIPRNTPIPVARAQEFTTYKDGQTAMVIHVVQ 423 (599)
T ss_pred CcHHHHHHHHHHHHHhcc--ccccCceEEEEeeeeeeEEEecCCEEEEEEeCCCcCCccceEEEEEccCCCeEEEEEEEe
Confidence 999999999999999997 446678999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHHHHHHh
Q psy7639 2385 GERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAER 2464 (2568)
Q Consensus 2385 ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~ 2464 (2568)
||+..+.+|..||+|.|.|+||+|+|.++|+|+|++|.||+|+|++.++.||+++.+.|.+. .+||+++|++|++++.+
T Consensus 424 Ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~V~a~~~~t~~~~~~~i~~~-~~l~~~~i~~~~~~~~~ 502 (599)
T TIGR01991 424 GERELVEDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLTVSAQEQSTGVEQSIQVKPS-YGLSDEEIERMLKDSFK 502 (599)
T ss_pred ecccccccCceEEEEEEcCCCCCCCCCCcEEEEEEECCCCeEEEEEEECCCCcEEEEecccc-cCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999988765 56999999999999999
Q ss_pred hhhhhHHHHHHHHHHHhHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHH
Q psy7639 2465 YKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPL 2544 (2568)
Q Consensus 2465 ~~~~D~~~re~~eakN~lE~~iy~~r~~L~~~~~~l~~~ek~~i~~~l~e~~~WL~~~~~a~~ee~~~k~~~L~~~~~pi 2544 (2568)
++.+|+..++..+++|++|+|+|++++.+.+....+++++|++++..+++.++||+++ +.++++++.++|++++.++
T Consensus 503 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~ 579 (599)
T TIGR01991 503 HAEEDMYARALAEQKVEAERILEALQAALAADGDLLSEDERAAIDAAMEALQKALQGD---DADAIKAAIEALEEATDNF 579 (599)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987667899999999999999999999875 5789999999999999999
Q ss_pred HHHHhcC
Q psy7639 2545 MSKMHGG 2551 (2568)
Q Consensus 2545 ~~r~~e~ 2551 (2568)
..+.++.
T Consensus 580 ~~~~~~~ 586 (599)
T TIGR01991 580 AARRMDR 586 (599)
T ss_pred HHHHHhh
Confidence 9876653
No 18
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=100.00 E-value=1e-90 Score=938.06 Aligned_cols=600 Identities=67% Similarity=1.027 Sum_probs=565.2
Q ss_pred HhcccccEEEEEEcccccc--cccCCcccccccccchh---hhhHHHHhhhcCCCccccccccccccccCChhhhhcccc
Q psy7639 1381 RISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRCRE---ECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKH 1455 (2568)
Q Consensus 1381 ~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~~~---~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~~k~ 1455 (2568)
.||||||++|++.++...+ |..|+|.|||+|+|.+. +|+.|+.++..||.+|++++||+||+.++|+.++..+++
T Consensus 10 DlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~~~~~~~~ 89 (653)
T PTZ00009 10 DLGTTYSCVGVWKNENVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARNPENTVFDAKRLIGRKFDDSVVQSDMKH 89 (653)
T ss_pred EeCcccEEEEEEeCCceEEEECCCCCccCCcEEEECCCCEEEcHHHHHhhhhCcccEEhhhHHHhCCCCCchhHhhhhhc
Confidence 5999999999999988777 99999999999999644 699999999999999999999999999999999999999
Q ss_pred cccEEeeCC-CCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCc
Q psy7639 1456 WPFTVVNDC-SKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLN 1534 (2568)
Q Consensus 1456 ~~~~~~~~~-~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~ 1534 (2568)
|||.++... +.+.+.|.+.+..+.|+|+||++++|++||+.|+.++|.++.++||||||||++.||+++++||++|||+
T Consensus 90 ~~~~~~~~~~~~~~~~v~~~~~~~~~~peel~a~iL~~lk~~ae~~~g~~v~~~VItVPa~f~~~qR~a~~~Aa~~AGl~ 169 (653)
T PTZ00009 90 WPFKVTTGGDDKPMIEVTYQGEKKTFHPEEISSMVLQKMKEIAEAYLGKQVKDAVVTVPAYFNDSQRQATKDAGTIAGLN 169 (653)
T ss_pred CceEEEEcCCCceEEEEEeCCceEEECHHHHHHHHHHHHHHHHHHHhCCCcceeEEEeCCCCCHHHHHHHHHHHHHcCCc
Confidence 999988653 4567778887777899999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHh
Q psy7639 1535 VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKR 1614 (2568)
Q Consensus 1535 v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~ 1614 (2568)
+++|++||+|||++|+.......++++|||||||||||+||+++.++ .++|+++.|+.++||.+||++|++|+.++|.+
T Consensus 170 v~~li~EptAAAl~y~~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~-~~~v~a~~gd~~lGG~d~D~~l~~~~~~~~~~ 248 (653)
T PTZ00009 170 VLRIINEPTAAAIAYGLDKKGDGEKNVLIFDLGGGTFDVSLLTIEDG-IFEVKATAGDTHLGGEDFDNRLVEFCVQDFKR 248 (653)
T ss_pred eeEEecchHHHHHHHhhhccCCCCCEEEEEECCCCeEEEEEEEEeCC-eEEEEEecCCCCCChHHHHHHHHHHHHHHHHH
Confidence 99999999999999998764445688999999999999999999766 89999999999999999999999999999998
Q ss_pred hh-cCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Q psy7639 1615 KY-KKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKL 1693 (2568)
Q Consensus 1615 ~~-~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~a~~ 1693 (2568)
++ +.++..+++.+.+|+.+||++|+.||...++.+.++.++++.++.++|||++||++|+|++++++.+|+++|+++++
T Consensus 249 ~~~~~~~~~~~~~~~~L~~~aEkaK~~LS~~~~~~i~i~~~~~~~d~~~~itR~~fe~l~~~l~~~~~~~i~~~L~~a~~ 328 (653)
T PTZ00009 249 KNRGKDLSSNQRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYNVTISRARFEELCGDYFRNTLQPVEKVLKDAGM 328 (653)
T ss_pred hccCCCCccCHHHHHHHHHHHHHHHHhCCCCceEEEEEEeccCCceEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77 36677789999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred CCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeecccccceeec
Q psy7639 1694 DKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETA 1773 (2568)
Q Consensus 1694 ~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slGie~~ 1773 (2568)
.+.+|+.|+||||+||+|+||++|+++|+++.+...+||++|||+|||++|+++++.....++++.++|++|++||+++.
T Consensus 329 ~~~~i~~ViLvGGssriP~v~~~i~~~f~~~~~~~~~npdeaVA~GAa~~aa~ls~~~~~~~~~~~~~dv~p~slgi~~~ 408 (653)
T PTZ00009 329 DKRSVHEVVLVGGSTRIPKVQSLIKDFFNGKEPCKSINPDEAVAYGAAVQAAILTGEQSSQVQDLLLLDVTPLSLGLETA 408 (653)
T ss_pred CHHHCcEEEEECCCCCChhHHHHHHHHhCCCCCCCCCCcchHHhhhhhhhHHHhcCCccccccceEEEeecccccCcccc
Confidence 99999999999999999999999999998778888999999999999999999998655567789999999999999999
Q ss_pred CcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcCCeeE
Q psy7639 1774 GGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGIL 1853 (2568)
Q Consensus 1774 ~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~nGiL 1853 (2568)
+|.+.+|||||++||+++++.|++..|+|+.+.|.||||++..+++|..||+|.+.++||.|+|.++|+|+|++|.||+|
T Consensus 409 ~~~~~~ii~~~t~iP~~~~~~f~t~~d~q~~~~i~i~ege~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~id~~Gil 488 (653)
T PTZ00009 409 GGVMTKLIERNTTIPTKKSQIFTTYADNQPGVLIQVFEGERAMTKDNNLLGKFHLDGIPPAPRGVPQIEVTFDIDANGIL 488 (653)
T ss_pred CCceEEEEeCCCcCCccceeEeEeecCCCceEEEEEEecccccCCCCceEEEEEEcCCCCCCCCCceEEEEEEECCCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCCCCHHH
Q psy7639 1854 NVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDN--AGNKLTESE 1931 (2568)
Q Consensus 1854 ~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~--~~~~~~~~~ 1931 (2568)
+|++.+..||++..++|.+..++||+++++++.+++.++..+|+.++++.++||+||+++|++++.|++ +...+++++
T Consensus 489 ~v~~~~~~t~~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~eakN~lEs~Iy~~r~~L~~~~~~~~~t~ee 568 (653)
T PTZ00009 489 NVSAEDKSTGKSNKITITNDKGRLSKADIDRMVNEAEKYKAEDEANRERVEAKNGLENYCYSMKNTLQDEKVKGKLSDSD 568 (653)
T ss_pred EEEEecccCCceeeEEEeeccccccHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHHhhhhhhccCCHHH
Confidence 999999999999999998777889999999999999999999999999999999999999999999964 678899999
Q ss_pred HHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhcccccccCCCCC
Q psy7639 1932 KSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGG 1981 (2568)
Q Consensus 1932 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~~~~~ 1981 (2568)
++++.+.++++++||+++..++.++|++|+++|++.+.|+..++|++++|
T Consensus 569 ~~~l~~~l~~~~~wL~~~~~~~~~~~~~kl~eL~~~~~pi~~r~~~~~~~ 618 (653)
T PTZ00009 569 KATIEKAIDEALEWLEKNQLAEKEEFEHKQKEVESVCNPIMTKMYQAAGG 618 (653)
T ss_pred HHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999998888899999999999999999999998866554
No 19
>PRK13411 molecular chaperone DnaK; Provisional
Probab=100.00 E-value=2e-90 Score=933.51 Aligned_cols=588 Identities=47% Similarity=0.759 Sum_probs=547.7
Q ss_pred HhcccccEEEEEEcccccc--cccCCcccccccccchh----hhhHHHHhhhcCCCccccccccccccccCChhhhhccc
Q psy7639 1381 RISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRCRE----ECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMK 1454 (2568)
Q Consensus 1381 ~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~~~----~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~~k 1454 (2568)
.||||||++|++.++.+.+ |.+|++.|||+|+|... +|+.|+.++..||.+|++++|||||+.++|+. ...+
T Consensus 8 DlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~--~~~~ 85 (653)
T PRK13411 8 DLGTTNSCVAVLEGGKPIVIPNSEGGRTTPSIVGFGKSGDRLVGQLAKRQAVTNAENTVYSIKRFIGRRWDDTE--EERS 85 (653)
T ss_pred EeCcccEEEEEEECCEEEEEECCCCCccCceEEEEeCCCCEEEcHHHHHhhhhCcccchHHHHHHhCCCccchh--HHhh
Confidence 5999999999999988777 99999999999999532 69999999999999999999999999998875 3468
Q ss_pred ccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCc
Q psy7639 1455 HWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLN 1534 (2568)
Q Consensus 1455 ~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~ 1534 (2568)
++||.++.+..+ .+.+.+ .++.|+|++|++++|++|++.|+.++|.++.++||||||||++.||++|++||++|||+
T Consensus 86 ~~~~~~v~~~~~-~~~~~i--~~~~~~peei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~ 162 (653)
T PRK13411 86 RVPYTCVKGRDD-TVNVQI--RGRNYTPQEISAMILQKLKQDAEAYLGEPVTQAVITVPAYFTDAQRQATKDAGTIAGLE 162 (653)
T ss_pred cCCceEEecCCC-ceEEEE--CCEEECHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCcHHHHHHHHHHHHcCCC
Confidence 999999876433 333444 36789999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHh
Q psy7639 1535 VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKR 1614 (2568)
Q Consensus 1535 v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~ 1614 (2568)
+++|++||+|||++|+.... ..+.++||||||||||||||+++.+| .++|+++.|+.+|||.+||+.|++|+.++|.+
T Consensus 163 v~~li~EPtAAAl~y~~~~~-~~~~~vlV~DlGgGT~dvsi~~~~~~-~~~V~at~gd~~LGG~dfD~~l~~~l~~~f~~ 240 (653)
T PRK13411 163 VLRIINEPTAAALAYGLDKQ-DQEQLILVFDLGGGTFDVSILQLGDG-VFEVKATAGNNHLGGDDFDNCIVDWLVENFQQ 240 (653)
T ss_pred eEEEecchHHHHHHhccccc-CCCCEEEEEEcCCCeEEEEEEEEeCC-EEEEEEEecCCCcCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998653 24678999999999999999999766 89999999999999999999999999999999
Q ss_pred hhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccC----CcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHH
Q psy7639 1615 KYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYD----GIDFYTKISRARFEELCSDLFRSTLQPVEKALQD 1690 (2568)
Q Consensus 1615 ~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~----~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~ 1690 (2568)
+++.++..++..+.+|+.+||++|+.||....+.+.++++.. +.++.+.|||++|+++|+|+++++..+|+++|++
T Consensus 241 ~~~~d~~~~~~~~~rL~~~aE~aK~~LS~~~~~~i~i~~~~~d~~~~~~~~~~itR~~fe~l~~~l~~~~~~~i~~~L~~ 320 (653)
T PRK13411 241 QEGIDLSQDKMALQRLREAAEKAKIELSSMLTTSINLPFITADETGPKHLEMELTRAKFEELTKDLVEATIEPMQQALKD 320 (653)
T ss_pred hhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeccCCCCCeeEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888889999999999999999999999999998887543 3568889999999999999999999999999999
Q ss_pred cCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeecccccce
Q psy7639 1691 AKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGI 1770 (2568)
Q Consensus 1691 a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slGi 1770 (2568)
+++.+.+|+.|+||||+||+|+||+.|+++|+++.+..++||++|||+|||++|+++++. .+++++.|++|++||+
T Consensus 321 a~~~~~~id~ViLvGGssriP~v~~~l~~~f~~~~~~~~~npdeaVA~GAAi~aa~l~~~----~~~~~~~dv~p~slgi 396 (653)
T PRK13411 321 AGLKPEDIDRVILVGGSTRIPAVQEAIQKFFGGKQPDRSVNPDEAVALGAAIQAGVLGGE----VKDLLLLDVTPLSLGI 396 (653)
T ss_pred cCCCHHHCcEEEEECCCCCcchHHHHHHHHcCCcCcCCCCCchHHHHHHHHHHHHhhcCC----ccceeeeecccceeeE
Confidence 999999999999999999999999999999987788889999999999999999999874 5689999999999999
Q ss_pred eecCcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcCC
Q psy7639 1771 ETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDAN 1850 (2568)
Q Consensus 1771 e~~~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~n 1850 (2568)
++.+|.|.+|||||++||+++++.|++..|+|+.+.|.|||||+.++.+|..||.|.+.++||+|+|.++|+|+|++|.|
T Consensus 397 ~~~~~~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~ 476 (653)
T PRK13411 397 ETLGEVFTKIIERNTTIPTSKSQVFSTATDGQTSVEIHVLQGERAMAKDNKSLGKFLLTGIPPAPRGVPQIEVSFEIDVN 476 (653)
T ss_pred EecCCceEEEEECCCcccceeeEEEEeccCCCeEEEEEEEEecCcccccCceeeEEEEcCCCCCCCCCccEEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHH
Q psy7639 1851 GILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTES 1930 (2568)
Q Consensus 1851 GiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~~~~~~~~~ 1930 (2568)
|+|+|++.+..||++..++|++. +.||++|+++|+++++++..+|+.++++.++||++|+++|.+++.|++....++++
T Consensus 477 Gil~v~a~d~~t~~~~~~~i~~~-~~ls~~ei~~~~~~~~~~~~~D~~~~~~~eakN~lEs~iy~~r~~l~~~~~~~~~~ 555 (653)
T PRK13411 477 GILKVSAQDQGTGREQSIRITNT-GGLSSNEIERMRQEAEKYAEEDRRRKQLIELKNQADSLLYSYESTLKENGELISEE 555 (653)
T ss_pred CeEEEEEeeccCCceEeeEEecc-ccchHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHH
Confidence 99999999999999999999864 67999999999999999999999999999999999999999999998778899999
Q ss_pred HHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhcccccccCCCCC
Q psy7639 1931 EKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGG 1981 (2568)
Q Consensus 1931 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~~~~~ 1981 (2568)
+++++.+.++++++||.++ .++.++|++++++|++.+.|+..++|+++++
T Consensus 556 er~~i~~~l~~~~~wL~~~-~~~~~~~~~~~~el~~~~~~i~~~~y~~~~~ 605 (653)
T PRK13411 556 LKQRAEQKVEQLEAALTDP-NISLEELKQQLEEFQQALLAIGAEVYQQGGS 605 (653)
T ss_pred HHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999874 4689999999999999999999999976554
No 20
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=100.00 E-value=5e-90 Score=924.02 Aligned_cols=540 Identities=40% Similarity=0.640 Sum_probs=502.4
Q ss_pred CCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEEe-cCCCceEEEEEcCceeeeChhhhHHHHHH
Q psy7639 1986 DMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DCSKPKIQVEFKGERKTFAPEEISSMVLT 2064 (2568)
Q Consensus 1986 ~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~peei~a~iL~ 2064 (2568)
+.+++|..|+.++.++|.+|++++|||||++++| ++.....+||.++. .+|.+.+.+. + ..|+|+||++++|+
T Consensus 62 ~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d--~~~~~~~~~~~~~~~~~g~~~~~~~--~--~~~~p~ei~a~iL~ 135 (616)
T PRK05183 62 DGIEVGYEARANAAQDPKNTISSVKRFMGRSLAD--IQQRYPHLPYQFVASENGMPLIRTA--Q--GLKSPVEVSAEILK 135 (616)
T ss_pred CCEEEcHHHHHhhHhCchhhHHHHHHHhCCCchh--hhhhhhcCCeEEEecCCCceEEEec--C--CeEcHHHHHHHHHH
Confidence 4589999999999999999999999999999987 45556789999874 4677766653 2 37999999999999
Q ss_pred HHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCeee
Q psy7639 2065 KMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTF 2144 (2568)
Q Consensus 2065 ~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt~ 2144 (2568)
+||+.|++++|.++.+|||||||||++.||++|++||++|||+|++|||||||||++|++++. .++++||||||||||
T Consensus 136 ~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EPtAAAlay~~~~~--~~~~vlV~DlGGGT~ 213 (616)
T PRK05183 136 ALRQRAEETLGGELDGAVITVPAYFDDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDSG--QEGVIAVYDLGGGTF 213 (616)
T ss_pred HHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEecchHHHHHHhhcccC--CCCEEEEEECCCCeE
Confidence 999999999999999999999999999999999999999999999999999999999998764 468899999999999
Q ss_pred EEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcceeEEEE
Q psy7639 2145 DVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEI 2224 (2568)
Q Consensus 2145 dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~~~i 2224 (2568)
||||+++.+| .|+|++++||.+|||+|||+.|++||.++| +.+...+++++++|+.+||+||+.||.+.++.+.+
T Consensus 214 DvSv~~~~~~-~~evlat~gd~~lGG~d~D~~l~~~~~~~~----~~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i 288 (616)
T PRK05183 214 DISILRLSKG-VFEVLATGGDSALGGDDFDHLLADWILEQA----GLSPRLDPEDQRLLLDAARAAKEALSDADSVEVSV 288 (616)
T ss_pred EEEEEEeeCC-EEEEEEecCCCCcCHHHHHHHHHHHHHHHc----CCCcCCCHHHHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 9999999988 899999999999999999999999999866 44555789999999999999999999999999998
Q ss_pred ecccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCCCCCCC
Q psy7639 2225 DALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSIN 2304 (2568)
Q Consensus 2225 ~~~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~~~~n 2304 (2568)
+. +...|||++||++|+++++++.++|+++|+++++++.+|+.|+|||||||||+||+.|+++|| +++..++|
T Consensus 289 ~~------~~~~itr~efe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~fg-~~~~~~~n 361 (616)
T PRK05183 289 AL------WQGEITREQFNALIAPLVKRTLLACRRALRDAGVEADEVKEVVMVGGSTRVPLVREAVGEFFG-RTPLTSID 361 (616)
T ss_pred ec------CCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCEEEEECCcccChHHHHHHHHHhc-cCcCcCCC
Confidence 53 233599999999999999999999999999999999999999999999999999999999995 56678999
Q ss_pred cchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEEEEEee
Q psy7639 2305 PDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFE 2384 (2568)
Q Consensus 2305 pdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~i~v~~ 2384 (2568)
||||||+|||+||+++++ .+.++++.+.|++|++|||++.+|.+.++||||++||+++++.|+|..|+|+.+.|+|||
T Consensus 362 pdeaVA~GAAi~a~~l~~--~~~~~~~~l~dv~p~slgi~~~~g~~~~ii~r~t~iP~~~~~~~~t~~d~q~~v~i~v~q 439 (616)
T PRK05183 362 PDKVVAIGAAIQADILAG--NKPDSDMLLLDVIPLSLGLETMGGLVEKIIPRNTTIPVARAQEFTTFKDGQTAMAIHVVQ 439 (616)
T ss_pred chHHHHHHHHHHHHHhcc--ccccCceEEEeeccccccceecCCeEEEEEeCCCcccccccEEEEeccCCCeEEEEEEec
Confidence 999999999999999998 345678999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHHHHHHh
Q psy7639 2385 GERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAER 2464 (2568)
Q Consensus 2385 ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~ 2464 (2568)
||+..+.+|..||+|.|.|+||+|+|.++|+|+|++|.||+|+|++.++.||++..++|.+. .+||+++|++|++++.+
T Consensus 440 Ge~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~~d~~Gil~V~a~~~~~~~~~~~~i~~~-~~ls~~~i~~~~~~~~~ 518 (616)
T PRK05183 440 GERELVADCRSLARFELRGIPPMAAGAARIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPS-YGLTDDEIARMLKDSMS 518 (616)
T ss_pred ccccccccccEEEEEEeCCCCCCCCCCccEEEEEEECCCCeEEEEEEEcCCCcEEEeccccc-ccCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999765 56999999999999999
Q ss_pred hhhhhHHHHHHHHHHHhHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHH
Q psy7639 2465 YKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPL 2544 (2568)
Q Consensus 2465 ~~~~D~~~re~~eakN~lE~~iy~~r~~L~~~~~~l~~~ek~~i~~~l~e~~~WL~~~~~a~~ee~~~k~~~L~~~~~pi 2544 (2568)
++.+|+..+++.+++|++|.|+|.+++.+.+.+..+++++|++++..+++.++||+.+ +.++|++++++|++.+.++
T Consensus 519 ~~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~---d~~~~~~~~~~l~~~~~~~ 595 (616)
T PRK05183 519 HAEEDMQARALAEQKVEAERVLEALQAALAADGDLLSAAERAAIDAAMAALREVAQGD---DADAIEAAIKALDKATQEF 595 (616)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999977667899999999999999999999864 6889999999999999999
Q ss_pred HHHHhcC
Q psy7639 2545 MSKMHGG 2551 (2568)
Q Consensus 2545 ~~r~~e~ 2551 (2568)
..+.++.
T Consensus 596 ~~~~~~~ 602 (616)
T PRK05183 596 AARRMDR 602 (616)
T ss_pred HHHHHhc
Confidence 9877653
No 21
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.9e-91 Score=915.87 Aligned_cols=528 Identities=58% Similarity=0.851 Sum_probs=506.1
Q ss_pred CCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEEecCCCceEEEEEcCceeeeChhhhHHHHHHHH
Q psy7639 1987 MPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKM 2066 (2568)
Q Consensus 1987 ~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~peei~a~iL~~l 2066 (2568)
++++|..|++++..||.||++.+||+||+.- ....+.+...+ +.|+|+||++|+|+||
T Consensus 51 ~~~vG~~A~~q~~~~p~~t~~~~kr~~G~~~--------------------~~~~~~~~~~~--~~~~~eeisa~~L~~l 108 (579)
T COG0443 51 EVLVGQAAKRQAVDNPENTIFSIKRKIGRGS--------------------NGLKISVEVDG--KKYTPEEISAMILTKL 108 (579)
T ss_pred CEEecHHHHHHhhhCCcceEEEEehhcCCCC--------------------CCCcceeeeCC--eeeCHHHHHHHHHHHH
Confidence 6999999999999999999999999999870 11122333334 7899999999999999
Q ss_pred HHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCeeeEE
Q psy7639 2067 KETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDV 2146 (2568)
Q Consensus 2067 k~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt~dv 2146 (2568)
|+.||.++|.+|+++||||||||++.||++|++||++|||+|+||||||||||++||+++. .+.+|||||||||||||
T Consensus 109 k~~ae~~lg~~v~~~VItVPayF~d~qR~at~~A~~iaGl~vlrlinEPtAAAlayg~~~~--~~~~vlV~DlGGGTfDv 186 (579)
T COG0443 109 KEDAEAYLGEKVTDAVITVPAYFNDAQRQATKDAARIAGLNVLRLINEPTAAALAYGLDKG--KEKTVLVYDLGGGTFDV 186 (579)
T ss_pred HHHHHHhhCCCcceEEEEeCCCCCHHHHHHHHHHHHHcCCCeEEEecchHHHHHHhHhccC--CCcEEEEEEcCCCCEEE
Confidence 9999999999999999999999999999999999999999999999999999999999887 67899999999999999
Q ss_pred EEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcceeEEEEec
Q psy7639 2147 SILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDA 2226 (2568)
Q Consensus 2147 sil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~~~i~~ 2226 (2568)
|||++.+| +|+|++|+||++|||+|||.+|++|++++|++++++|++.++++++||+.+||++|+.||+..++.+++++
T Consensus 187 Sll~~~~g-~~ev~at~gd~~LGGddfD~~l~~~~~~~f~~~~~~d~~~~~~~~~rL~~~ae~aK~~LS~~~~~~i~~~~ 265 (579)
T COG0443 187 SLLEIGDG-VFEVLATGGDNHLGGDDFDNALIDYLVMEFKGKGGIDLRSDKAALQRLREAAEKAKIELSSATQTSINLPS 265 (579)
T ss_pred EEEEEcCC-EEEEeecCCCcccCchhHHHHHHHHHHHHhhccCCccccccHHHHHHHHHHHHHHHHHcccccccccchhh
Confidence 99999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCCCCCCCcc
Q psy7639 2227 LYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPD 2306 (2568)
Q Consensus 2227 ~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~~~~npd 2306 (2568)
+..+.++..+|||++||+++.+++.|++.+++++|+++++++.+|+.|+||||+||||+|++.|+++|+ +++.+++|||
T Consensus 266 ~~~~~~~~~~ltR~~~E~l~~dll~r~~~~~~~al~~a~l~~~~I~~VilvGGstriP~V~~~v~~~f~-~~~~~~inpd 344 (579)
T COG0443 266 IGGDIDLLKELTRAKFEELILDLLERTIEPVEQALKDAGLEKSDIDLVILVGGSTRIPAVQELVKEFFG-KEPEKSINPD 344 (579)
T ss_pred ccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEccceeccHHHHHHHHHHhC-ccccccCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999995 9999999999
Q ss_pred hhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEEEEEeecC
Q psy7639 2307 EAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGE 2386 (2568)
Q Consensus 2307 eava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~i~v~~ge 2386 (2568)
|+||+|||+||+.+++. ..+++++|++|+++|+++.++.++++|+||+++|.+++..|+|..|+|+.+.++++|||
T Consensus 345 eava~GAa~qa~~l~~~----~~d~ll~Dv~plslgie~~~~~~~~ii~rn~~iP~~~~~~f~t~~d~q~~~~i~v~qge 420 (579)
T COG0443 345 EAVALGAAIQAAVLSGE----VPDVLLLDVIPLSLGIETLGGVRTPIIERNTTIPVKKSQEFSTAADGQTAVAIHVFQGE 420 (579)
T ss_pred HHHHHHHHHHHHhhcCc----ccCceEEeeeeeccccccCcchhhhHHhcCCCCCcccceEEEeecCCCceeEEEEEecc
Confidence 99999999999999983 33999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHHHHHHhhh
Q psy7639 2387 RAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYK 2466 (2568)
Q Consensus 2387 ~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~~~~~~ 2466 (2568)
+.++.+|.++|.|++.++||+|+|.|+|+|+|++|+||+++|++.++.||++..++|....+ |++++|++|++++..++
T Consensus 421 ~~~~~~~~~lg~f~l~~i~~~~~g~~~i~v~f~iD~~gi~~v~a~~~~~~k~~~i~i~~~~~-ls~~~i~~~~~~a~~~~ 499 (579)
T COG0443 421 REMAADNKSLGRFELDGIPPAPRGVPQIEVTFDIDANGILNVTAKDLGTGKEQSITIKASSG-LSDEEIERMVEDAEANA 499 (579)
T ss_pred hhhcccCceeEEEECCCCCCCCCCCCceEEEeccCCCcceEeeeecccCCceEEEEEecCCC-CCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999866 99999999999999999
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHH
Q psy7639 2467 DEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMS 2546 (2568)
Q Consensus 2467 ~~D~~~re~~eakN~lE~~iy~~r~~L~~~~~~l~~~ek~~i~~~l~e~~~WL~~~~~a~~ee~~~k~~~L~~~~~pi~~ 2546 (2568)
+.|++.++..+++|.++.+++.++..|.+.. ++++++++++...+.+++.||++ + .++++.+.++|+....++..
T Consensus 500 ~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~-~---~~~~~~~~~~l~~~~~~~~~ 574 (579)
T COG0443 500 ALDKKFRELVEARNEAESLIYSLEKALKEIV-KVSEEEKEKIEEAITDLEEALEG-E---KEEIKAKIEELQEVTQKLAE 574 (579)
T ss_pred hhHHHHHHHHHhhHHHHHHHHHHHHHHhhhc-cCCHHHHHHHHHHHHHHHHHHhc-c---HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999877 99999999999999999999987 2 88999999999999999998
Q ss_pred HHhc
Q psy7639 2547 KMHG 2550 (2568)
Q Consensus 2547 r~~e 2550 (2568)
++++
T Consensus 575 ~~~~ 578 (579)
T COG0443 575 KKYQ 578 (579)
T ss_pred HHhc
Confidence 8774
No 22
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=100.00 E-value=3.7e-89 Score=921.10 Aligned_cols=585 Identities=48% Similarity=0.773 Sum_probs=546.4
Q ss_pred HhcccccEEEEEEcccccc--cccCCcccccccccchh----hhhHHHHhhhcCCCccccccccccccccCChhhhhccc
Q psy7639 1381 RISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRCRE----ECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMK 1454 (2568)
Q Consensus 1381 ~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~~~----~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~~k 1454 (2568)
.||||||++|++.++.+.+ |..|+|.|||+|+|... +|+.|++++..||.+|++++|||||+.++|+.++...+
T Consensus 47 DlGTt~s~va~~~~~~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~~~~~~~~ 126 (663)
T PTZ00400 47 DLGTTNSCVAIMEGSQPKVIENSEGMRTTPSVVAFTEDGQRLVGIVAKRQAVTNPENTVFATKRLIGRRYDEDATKKEQK 126 (663)
T ss_pred EECcccEEEEEEeCCeeEEEECCCCCcccCeEEEEeCCCCEEECHHHHHhHHhCCcceehhhhhhcCCCcCcHHHHhhhc
Confidence 4999999999999888777 99999999999999532 69999999999999999999999999999999999999
Q ss_pred ccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCc
Q psy7639 1455 HWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLN 1534 (2568)
Q Consensus 1455 ~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~ 1534 (2568)
+|||.++....+ ...+.+ .++.|+|++|++++|++||+.|+.++|.++.++||||||||++.||++|++||++|||+
T Consensus 127 ~~p~~~~~~~~~-~~~~~~--~~~~~speel~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~ 203 (663)
T PTZ00400 127 ILPYKIVRASNG-DAWIEA--QGKKYSPSQIGAFVLEKMKETAESYLGRKVKQAVITVPAYFNDSQRQATKDAGKIAGLD 203 (663)
T ss_pred cCCeEEEecCCC-ceEEEE--CCEEECHHHHHHHHHHHHHHHHHHHhCCCCceEEEEECCCCCHHHHHHHHHHHHHcCCc
Confidence 999999876432 333444 46789999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHh
Q psy7639 1535 VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKR 1614 (2568)
Q Consensus 1535 v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~ 1614 (2568)
+++||+||+|||++|+.+. ..++++||||||||||||||+++.+| .++|+++.|+.++||.+||+.|++||.++|++
T Consensus 204 v~~li~EptAAAlay~~~~--~~~~~vlV~DlGgGT~DvSv~~~~~g-~~~v~a~~gd~~LGG~d~D~~l~~~l~~~f~~ 280 (663)
T PTZ00400 204 VLRIINEPTAAALAFGMDK--NDGKTIAVYDLGGGTFDISILEILGG-VFEVKATNGNTSLGGEDFDQRILNYLIAEFKK 280 (663)
T ss_pred eEEEeCchHHHHHHhcccc--CCCcEEEEEeCCCCeEEEEEEEecCC-eeEEEecccCCCcCHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999865 34678999999999999999999776 89999999999999999999999999999999
Q ss_pred hhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccCC----cceeeecCHHHHHHHHhHHHHHHHHHHHHHHHH
Q psy7639 1615 KYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDG----IDFYTKISRARFEELCSDLFRSTLQPVEKALQD 1690 (2568)
Q Consensus 1615 ~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~----~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~ 1690 (2568)
+++.++..++..+.+|+.+||++|+.||....+.+.++.+..+ .++.++|||++|+++|+|++++++.+|+++|++
T Consensus 281 ~~~~~~~~~~~a~~~L~~~aE~aK~~LS~~~~~~i~i~~~~~d~~g~~~~~~~itR~efe~l~~~l~~~~~~~i~~~L~~ 360 (663)
T PTZ00400 281 QQGIDLKKDKLALQRLREAAETAKIELSSKTQTEINLPFITADQSGPKHLQIKLSRAKLEELTHDLLKKTIEPCEKCIKD 360 (663)
T ss_pred hcCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEEEeeccCCCCceEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888899999999999999999999998888888765433 468899999999999999999999999999999
Q ss_pred cCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeecccccce
Q psy7639 1691 AKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGI 1770 (2568)
Q Consensus 1691 a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slGi 1770 (2568)
+++.+.+|+.|+||||+||+|+||++|+++|+ ..+...+||+++||+|||++|+++++. .+++++.|++|++||+
T Consensus 361 a~~~~~~i~~ViLvGGssriP~v~~~l~~~f~-~~~~~~~npdeaVA~GAAi~aa~l~~~----~~~~~~~dv~p~slgi 435 (663)
T PTZ00400 361 AGVKKDELNDVILVGGMTRMPKVSETVKKIFG-KEPSKGVNPDEAVAMGAAIQAGVLKGE----IKDLLLLDVTPLSLGI 435 (663)
T ss_pred cCCCHHHCcEEEEECCccCChHHHHHHHHHhC-CCcccCCCCccceeeccHHHHHhhcCC----ccceEEEeccccceEE
Confidence 99999999999999999999999999999995 567788999999999999999999874 4678999999999999
Q ss_pred eecCcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcCC
Q psy7639 1771 ETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDAN 1850 (2568)
Q Consensus 1771 e~~~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~n 1850 (2568)
++.+|.|.+||||||+||+++++.|++..|+|+.+.|.||||++.++.+|..||+|.+.++||.|+|.++|+|+|++|.|
T Consensus 436 ~~~~g~~~~ii~~~t~iP~~~~~~f~~~~d~q~~~~i~i~ege~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~id~~ 515 (663)
T PTZ00400 436 ETLGGVFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDVDAN 515 (663)
T ss_pred EecCCeeEEEEecCccCCccceeeeeeccCCCceEEEEEEEecCccCCcCceeEEEEEcCCCCCCCCCceEEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHH
Q psy7639 1851 GILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTES 1930 (2568)
Q Consensus 1851 GiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~~~~~~~~~ 1930 (2568)
|+|+|++.+..+|++..++|+.. .+||++|++++.++++++..+|+.++++.++||++|+++|.+++.|++....++++
T Consensus 516 Gil~v~a~~~~~~~~~~~~i~~~-~~ls~~ei~~~~~~~~~~~~~D~~~~~~~eakN~lEs~iy~~r~~l~e~~~~~s~~ 594 (663)
T PTZ00400 516 GIMNISAVDKSTGKKQEITIQSS-GGLSDEEIEKMVKEAEEYKEQDEKKKELVDAKNEAETLIYSVEKQLSDLKDKISDA 594 (663)
T ss_pred CCEEEEEEeccCCcEEEEEeecc-ccccHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCHH
Confidence 99999999999999999999865 57999999999999999999999999999999999999999999998788899999
Q ss_pred HHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhcccccccCCCC
Q psy7639 1931 EKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAG 1980 (2568)
Q Consensus 1931 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~~~~ 1980 (2568)
+++++.+.++++++||..+ +.++|++++++|++.+.++..++|+++.
T Consensus 595 ere~i~~~l~~~~~WL~~~---d~~~i~~k~~eL~~~l~~l~~k~y~~~~ 641 (663)
T PTZ00400 595 DKDELKQKITKLRSTLSSE---DVDSIKDKTKQLQEASWKISQQAYKQGN 641 (663)
T ss_pred HHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999865 6899999999999999999999986543
No 23
>PRK13410 molecular chaperone DnaK; Provisional
Probab=100.00 E-value=1.6e-88 Score=910.36 Aligned_cols=580 Identities=45% Similarity=0.746 Sum_probs=532.1
Q ss_pred HhcccccEEEEEEcccccc--cccCCcccccccccchh----hhhHHHHhhhcCCCccccccccccccccCChhhhhccc
Q psy7639 1381 RISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRCRE----ECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMK 1454 (2568)
Q Consensus 1381 ~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~~~----~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~~k 1454 (2568)
.||||||++|++.++.+.+ |..|++.|||+|+|... +|+.|++++..||.+|++++||+||+.++| ++...+
T Consensus 8 DlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KRliG~~~~~--~~~~~~ 85 (668)
T PRK13410 8 DLGTTNSVVAVMEGGKPVVIANAEGMRTTPSVVGFTKDGELLVGQLARRQLVLNPQNTFYNLKRFIGRRYDE--LDPESK 85 (668)
T ss_pred EeCCCcEEEEEEECCeEEEEECCCCCccCceEEEEeCCCCEEECHHHHHhhHhCccceehHHhhhhCCCchh--hHHhhc
Confidence 5999999999999998776 99999999999999532 699999999999999999999999999876 445678
Q ss_pred ccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCc
Q psy7639 1455 HWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLN 1534 (2568)
Q Consensus 1455 ~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~ 1534 (2568)
++||.+..... +.+.+.+...++.|+|++|+|++|++|++.|+.++|.++.++||||||||++.||++|++||++|||+
T Consensus 86 ~~~~~v~~~~~-g~~~i~~~~~~~~~speel~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~ 164 (668)
T PRK13410 86 RVPYTIRRNEQ-GNVRIKCPRLEREFAPEELSAMILRKLADDASRYLGEPVTGAVITVPAYFNDSQRQATRDAGRIAGLE 164 (668)
T ss_pred cCCeEEEECCC-CcEEEEEecCCeEEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCC
Confidence 89999987543 34555565567899999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHh
Q psy7639 1535 VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKR 1614 (2568)
Q Consensus 1535 v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~ 1614 (2568)
+++||+||+|||++|+.+.. .++++||||||||||||||+++.+| .++|+++.|+.++||.+||+.|++|+.++|..
T Consensus 165 v~~li~EPtAAAlayg~~~~--~~~~vlV~DlGgGT~Dvsv~~~~~g-~~~V~at~gd~~lGG~dfD~~l~~~l~~~f~~ 241 (668)
T PRK13410 165 VERILNEPTAAALAYGLDRS--SSQTVLVFDLGGGTFDVSLLEVGNG-VFEVKATSGDTQLGGNDFDKRIVDWLAEQFLE 241 (668)
T ss_pred eEEEecchHHHHHHhccccC--CCCEEEEEECCCCeEEEEEEEEcCC-eEEEEEeecCCCCChhHHHHHHHHHHHHHHHh
Confidence 99999999999999998653 4678999999999999999999776 89999999999999999999999999999999
Q ss_pred hhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccCC----cceeeecCHHHHHHHHhHHHHHHHHHHHHHHHH
Q psy7639 1615 KYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDG----IDFYTKISRARFEELCSDLFRSTLQPVEKALQD 1690 (2568)
Q Consensus 1615 ~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~----~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~ 1690 (2568)
+++.++..+++.+.+|+.+||++|+.||....+.+.++++..+ .++...|||++||++|+|+++++..+|+++|++
T Consensus 242 ~~~~d~~~~~~a~~rL~~~aEkaK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~FE~l~~~l~~r~~~~i~~~L~~ 321 (668)
T PRK13410 242 KEGIDLRRDRQALQRLTEAAEKAKIELSGVSVTDISLPFITATEDGPKHIETRLDRKQFESLCGDLLDRLLRPVKRALKD 321 (668)
T ss_pred hhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeecCCCCCeeEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888889999999999999999999999999999876543 467889999999999999999999999999999
Q ss_pred cCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeecccccce
Q psy7639 1691 AKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGI 1770 (2568)
Q Consensus 1691 a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slGi 1770 (2568)
+++.+.+|+.|+||||+||||+|++.|+++|+ ..+...+||++|||+|||++|+++++. .+++++.|++|++||+
T Consensus 322 ag~~~~dId~VvLVGGssRiP~V~~~l~~~fg-~~~~~~~npdeaVA~GAAi~aa~ls~~----~~~~~l~Dv~p~slgi 396 (668)
T PRK13410 322 AGLSPEDIDEVVLVGGSTRMPMVQQLVRTLIP-REPNQNVNPDEVVAVGAAIQAGILAGE----LKDLLLLDVTPLSLGL 396 (668)
T ss_pred cCCChhhCcEEEEECCccccHHHHHHHHHHcC-CCcccCCCCchHHHHhHHHHHHhhccc----ccceeEEeeccccccc
Confidence 99999999999999999999999999999994 667788999999999999999999874 4689999999999999
Q ss_pred eecCcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcCC
Q psy7639 1771 ETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDAN 1850 (2568)
Q Consensus 1771 e~~~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~n 1850 (2568)
++.+|.|.+||||||+||++++.+|++..|||+.+.|.|||||+.++.+|..||+|.|.++||+|+|.++|+|+|+||.|
T Consensus 397 e~~~g~~~~li~rnt~iP~~~~~~f~t~~dnq~~v~i~v~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~I~v~f~id~n 476 (668)
T PRK13410 397 ETIGGVMKKLIPRNTTIPVRRSDVFSTSENNQSSVEIHVWQGEREMASDNKSLGRFKLSGIPPAPRGVPQVQVAFDIDAN 476 (668)
T ss_pred eecCCeeEEEEeCCCcccccccccceeccCCCcEEEEEEEeeccccccCCceEEEEEEeCCCCCCCCCCeEEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hcCC
Q psy7639 1851 GILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDN----AGNK 1926 (2568)
Q Consensus 1851 GiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~----~~~~ 1926 (2568)
|+|+|++.+..||+++.++|... .+||++|+++|+++++++..+|+.++++.++||++|+|+|+++..|.+ +...
T Consensus 477 GiL~V~a~d~~tg~~~~~~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~e~kn~~e~~i~~~~~~l~~~~~~~~~~ 555 (668)
T PRK13410 477 GILQVSATDRTTGREQSVTIQGA-STLSEQEVNRMIQEAEAKADEDRRRRERIEKRNRALTLIAQAERRLRDAALEFGPY 555 (668)
T ss_pred cEEEEEEEEcCCCceeeeeeccc-ccCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 99999999999999999999864 679999999999999999999999999999999999999999999964 5677
Q ss_pred CCHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhcccccc
Q psy7639 1927 LTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKM 1975 (2568)
Q Consensus 1927 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 1975 (2568)
+++++++++...++++++||.++ +.+.++.+.++|.+.+.+++..+
T Consensus 556 ~~~~~~~~~~~~l~~~~~wL~~~---~~~~~~~~~~~~~~~l~~~~~~~ 601 (668)
T PRK13410 556 FAERQRRAVESAMRDVQDSLEQD---DDRELDLAVADLQEALYGLNREV 601 (668)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999754 44566666666666665554444
No 24
>PLN03184 chloroplast Hsp70; Provisional
Probab=100.00 E-value=3.2e-88 Score=911.75 Aligned_cols=590 Identities=45% Similarity=0.743 Sum_probs=546.0
Q ss_pred HhcccccEEEEEEcccccc--cccCCcccccccccch----hhhhHHHHhhhcCCCccccccccccccccCChhhhhccc
Q psy7639 1381 RISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRCR----EECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMK 1454 (2568)
Q Consensus 1381 ~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~~----~~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~~k 1454 (2568)
.||||||++|++.++.+.+ |..|++.|||+|+|.. .+|+.|++++..||.+|++++|||||+.++|. +...+
T Consensus 45 DlGTt~s~va~~~~g~~~ii~n~~g~r~tPS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~--~~~~~ 122 (673)
T PLN03184 45 DLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEV--DEESK 122 (673)
T ss_pred EeCcCcEEEEEEECCeEEEEECCCCCeecceEEEEcCCCCEEECHHHHHhhhhCchhhhHHHHHhhCCCcchh--hhhhh
Confidence 5999999999999988776 9999999999999953 26999999999999999999999999998764 45678
Q ss_pred ccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCc
Q psy7639 1455 HWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLN 1534 (2568)
Q Consensus 1455 ~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~ 1534 (2568)
.|||.++... ++.+.+.+...++.|+|++|++++|++|++.|+.++|.++.++||||||||++.||++|++||++|||+
T Consensus 123 ~~~~~v~~~~-~~~v~~~~~~~~~~~speei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~ 201 (673)
T PLN03184 123 QVSYRVVRDE-NGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKVTKAVITVPAYFNDSQRTATKDAGRIAGLE 201 (673)
T ss_pred cCCeEEEecC-CCcEEEEEecCCeEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHCCCC
Confidence 8999998764 334455555556789999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHh
Q psy7639 1535 VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKR 1614 (2568)
Q Consensus 1535 v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~ 1614 (2568)
+++||+||+|||++|+.+.. .++++||||||||||||||+++.++ .++|+++.|+.+|||.+||+.|++|+.++|..
T Consensus 202 v~~li~EPtAAAlayg~~~~--~~~~vlV~DlGgGT~DvSi~~~~~~-~~eVla~~gd~~LGG~dfD~~L~~~~~~~f~~ 278 (673)
T PLN03184 202 VLRIINEPTAASLAYGFEKK--SNETILVFDLGGGTFDVSVLEVGDG-VFEVLSTSGDTHLGGDDFDKRIVDWLASNFKK 278 (673)
T ss_pred eEEEeCcHHHHHHHhhcccC--CCCEEEEEECCCCeEEEEEEEecCC-EEEEEEecCCCccCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998653 4678999999999999999999776 89999999999999999999999999999999
Q ss_pred hhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccC----CcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHH
Q psy7639 1615 KYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYD----GIDFYTKISRARFEELCSDLFRSTLQPVEKALQD 1690 (2568)
Q Consensus 1615 ~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~----~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~ 1690 (2568)
+++.++..+++.+.+|+.+||++|+.||....+.+.++++.. +.++..+|||++|+++|+|+++++..+|+++|++
T Consensus 279 ~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~fe~l~~~l~~r~~~~i~~~L~~ 358 (673)
T PLN03184 279 DEGIDLLKDKQALQRLTEAAEKAKIELSSLTQTSISLPFITATADGPKHIDTTLTRAKFEELCSDLLDRCKTPVENALRD 358 (673)
T ss_pred hcCCCcccCHHHHHHHHHHHHHHHHhcCCCCcceEEEEeeeccCCCCceEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888889999999999999999999999999998876542 2568889999999999999999999999999999
Q ss_pred cCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeecccccce
Q psy7639 1691 AKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGI 1770 (2568)
Q Consensus 1691 a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slGi 1770 (2568)
+++.+.+|+.|+||||+||||.||++|+++| +..+...+||++|||+|||++|+++++. .+++++.|++|++||+
T Consensus 359 a~~~~~dId~ViLvGGssriP~V~~~i~~~f-g~~~~~~~npdeaVA~GAAi~aa~ls~~----~~~~~~~dv~p~slgi 433 (673)
T PLN03184 359 AKLSFKDIDEVILVGGSTRIPAVQELVKKLT-GKDPNVTVNPDEVVALGAAVQAGVLAGE----VSDIVLLDVTPLSLGL 433 (673)
T ss_pred cCCChhHccEEEEECCccccHHHHHHHHHHh-CCCcccccCcchHHHHHHHHHHHHhccC----ccceEEEecccccceE
Confidence 9999999999999999999999999999999 4667788999999999999999999874 4678999999999999
Q ss_pred eecCcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcCC
Q psy7639 1771 ETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDAN 1850 (2568)
Q Consensus 1771 e~~~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~n 1850 (2568)
++.+|.+.+|||||++||+++++.|++..|+|+.+.|.|||||+.++.+|..||+|.|.++||.|+|.++|+|+|++|.|
T Consensus 434 ~~~~~~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~i~~ge~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~id~~ 513 (673)
T PLN03184 434 ETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDAN 513 (673)
T ss_pred EecCCeeEEEEeCCCccceecceEeeeecCCCcEEEEEEEeecccccccCceEEEEEEeCCCCCCCCCceEEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHH
Q psy7639 1851 GILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTES 1930 (2568)
Q Consensus 1851 GiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~~~~~~~~~ 1930 (2568)
|+|+|++.+..||++..++|++ ..+||++|+++|.++++++..+|+.++++.++||++|+++|.+++.|+++...++++
T Consensus 514 GiL~V~a~~~~t~~~~~~~i~~-~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakN~lE~~iy~~r~~l~e~~~~~~~e 592 (673)
T PLN03184 514 GILSVSATDKGTGKKQDITITG-ASTLPKDEVERMVQEAEKFAKEDKEKRDAVDTKNQADSVVYQTEKQLKELGDKVPAD 592 (673)
T ss_pred CeEEEEEEecCCCeEEEEEecc-cccccHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHHHHHhhhCCHH
Confidence 9999999999999999999986 467999999999999999999999999999999999999999999998788889999
Q ss_pred HHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhcccccccCCCCCCCCC
Q psy7639 1931 EKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGGASAG 1985 (2568)
Q Consensus 1931 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~ 1985 (2568)
+++++.+.++++++||..+ +.+++++++++|.+.+.++..++|.++|++.++
T Consensus 593 er~~l~~~l~~~e~wL~~~---d~~~ik~~~~~l~~~l~~l~~~~~~~~~~~~~~ 644 (673)
T PLN03184 593 VKEKVEAKLKELKDAIASG---STQKMKDAMAALNQEVMQIGQSLYNQPGAGGAG 644 (673)
T ss_pred HHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 9999999999999999865 678999999999999999999998766554443
No 25
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=100.00 E-value=3e-86 Score=896.47 Aligned_cols=583 Identities=51% Similarity=0.799 Sum_probs=543.6
Q ss_pred HhcccccEEEEEEcccccc--cccCCcccccccccch----hhhhHHHHhhhcCCCccccccccccccccCChhhhhccc
Q psy7639 1381 RISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRCR----EECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMK 1454 (2568)
Q Consensus 1381 ~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~~----~~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~~k 1454 (2568)
.||||||++|++.++.+.+ |..|++.|||+|+|.. .+|+.|+.++..||.+|++++|||||+. ++.++...+
T Consensus 8 DlGTt~s~va~~~~g~~~ii~n~~g~r~~PS~V~f~~~~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG~~--~~~~~~~~~ 85 (627)
T PRK00290 8 DLGTTNSCVAVMEGGEPKVIENAEGARTTPSVVAFTKDGERLVGQPAKRQAVTNPENTIFSIKRLMGRR--DEEVQKDIK 85 (627)
T ss_pred EeCcccEEEEEEECCEEEEEECCCCCcccceEEEEeCCCCEEEcHHHHHhhhhCchhhHHHHHHHhCCC--chHHHHHhh
Confidence 5999999999999988877 8999999999999952 2699999999999999999999999998 567788889
Q ss_pred ccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCc
Q psy7639 1455 HWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLN 1534 (2568)
Q Consensus 1455 ~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~ 1534 (2568)
+|||.++.... ....+.+ .++.|+|++|++++|++|++.|+.++|.++.++||||||||++.||++|++||++|||+
T Consensus 86 ~~p~~~~~~~~-~~~~~~~--~~~~~~peel~a~iL~~lk~~ae~~~g~~v~~~VItVPa~f~~~qR~a~~~Aa~~AGl~ 162 (627)
T PRK00290 86 LVPYKIVKADN-GDAWVEI--DGKKYTPQEISAMILQKLKKDAEDYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLE 162 (627)
T ss_pred cCCeEEEEcCC-CceEEEE--CCEEEcHHHHHHHHHHHHHHHHHHHhCCCCceEEEEECCCCCHHHHHHHHHHHHHcCCc
Confidence 99999997643 2333444 35789999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHh
Q psy7639 1535 VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKR 1614 (2568)
Q Consensus 1535 v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~ 1614 (2568)
+++|++||+|||++|+.... .++++|||||||||||+|++++.++ .++|+++.|+.++||.+||+.|++|+.++|+.
T Consensus 163 v~~li~EptAAAl~y~~~~~--~~~~vlV~D~GggT~dvsv~~~~~~-~~~vla~~gd~~lGG~d~D~~l~~~~~~~~~~ 239 (627)
T PRK00290 163 VLRIINEPTAAALAYGLDKK--GDEKILVYDLGGGTFDVSILEIGDG-VFEVLSTNGDTHLGGDDFDQRIIDYLADEFKK 239 (627)
T ss_pred eEEEecchHHHHHHhhhccC--CCCEEEEEECCCCeEEEEEEEEeCC-eEEEEEecCCCCcChHHHHHHHHHHHHHHHHH
Confidence 99999999999999998653 4688999999999999999999766 89999999999999999999999999999999
Q ss_pred hhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccC----CcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHH
Q psy7639 1615 KYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYD----GIDFYTKISRARFEELCSDLFRSTLQPVEKALQD 1690 (2568)
Q Consensus 1615 ~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~----~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~ 1690 (2568)
+++.++..+++.+.+|+.+||++|+.||....+.+.++.+.. +.++.++|||++|+++|+|+++++..+|+++|++
T Consensus 240 ~~~~~~~~~~~~~~rL~~~ae~aK~~LS~~~~~~i~i~~~~~d~~g~~~~~~~itR~~fe~l~~~l~~~~~~~i~~~l~~ 319 (627)
T PRK00290 240 ENGIDLRKDKMALQRLKEAAEKAKIELSSAQQTEINLPFITADASGPKHLEIKLTRAKFEELTEDLVERTIEPCKQALKD 319 (627)
T ss_pred hhCCCcccCHHHHHHHHHHHHHHHHHcCCCCeEEEEEeecccCCCCCeEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888889999999999999999999999999998887653 2578899999999999999999999999999999
Q ss_pred cCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeecccccce
Q psy7639 1691 AKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGI 1770 (2568)
Q Consensus 1691 a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slGi 1770 (2568)
+++.+.+|+.|+||||+||+|+|++.|+++| +..+..++||++|||+|||++|+++++. .+++++.|++|++||+
T Consensus 320 a~~~~~~id~ViLvGGssriP~v~~~l~~~f-g~~~~~~~npdeava~GAa~~aa~l~~~----~~~~~~~d~~~~slgi 394 (627)
T PRK00290 320 AGLSVSDIDEVILVGGSTRMPAVQELVKEFF-GKEPNKGVNPDEVVAIGAAIQGGVLAGD----VKDVLLLDVTPLSLGI 394 (627)
T ss_pred cCCChhhCcEEEEECCcCCChHHHHHHHHHh-CCCCCcCcCChHHHHHhHHHHHHHhcCC----ccceeeeeccceEEEE
Confidence 9999999999999999999999999999999 5667889999999999999999999874 4678999999999999
Q ss_pred eecCcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcCC
Q psy7639 1771 ETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDAN 1850 (2568)
Q Consensus 1771 e~~~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~n 1850 (2568)
++.+|.|.+|||||+++|+++++.|++..|+|+.+.|.||||++..+.+|..||+|.+.++||.|+|.++|+|+|++|.|
T Consensus 395 ~~~~~~~~~ii~~~t~~P~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~f~~d~~ 474 (627)
T PRK00290 395 ETLGGVMTKLIERNTTIPTKKSQVFSTAADNQPAVTIHVLQGEREMAADNKSLGRFNLTGIPPAPRGVPQIEVTFDIDAN 474 (627)
T ss_pred EecCCeEEEEecCCCcCCccceEEEEecCCCcceEEEEEEEecccccCcCceEEEEEECCCCCCCCCCceEEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHH
Q psy7639 1851 GILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTES 1930 (2568)
Q Consensus 1851 GiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~~~~~~~~~ 1930 (2568)
|+|+|++.+..+|+..+++|.++ .+||+++++++.+++.++..+|+..+++.++||++|+++|.+++.|++....++++
T Consensus 475 gil~v~a~~~~~~~~~~~~i~~~-~~ls~e~i~~~~~~~~~~~~~d~~~~~~~eakN~le~~i~~~~~~l~~~~~~~~~~ 553 (627)
T PRK00290 475 GIVHVSAKDKGTGKEQSITITAS-SGLSDEEIERMVKDAEANAEEDKKRKELVEARNQADSLIYQTEKTLKELGDKVPAD 553 (627)
T ss_pred ceEEEEEEEccCCceeEEEeccc-cccCHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 99999999999999999999865 57999999999999999999999999999999999999999999998777889999
Q ss_pred HHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhcccccccCCCC
Q psy7639 1931 EKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAG 1980 (2568)
Q Consensus 1931 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~~~~ 1980 (2568)
+++++.+.|+++++||+.+ +.++|++++++|+..+.|+..++|++++
T Consensus 554 e~~~i~~~l~~~~~wL~~~---~~~~i~~k~~~L~~~~~~~~~~~~~~~~ 600 (627)
T PRK00290 554 EKEKIEAAIKELKEALKGE---DKEAIKAKTEELTQASQKLGEAMYQQAQ 600 (627)
T ss_pred HHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999865 7889999999999999999999987533
No 26
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=100.00 E-value=4.3e-86 Score=884.86 Aligned_cols=575 Identities=40% Similarity=0.622 Sum_probs=528.8
Q ss_pred HhcccccEEEEEEcccccc--cccCCcccccccccchh----hhhHHHHhhhcCCCccccccccccccccCChhhhhccc
Q psy7639 1381 RISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRCRE----ECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMK 1454 (2568)
Q Consensus 1381 ~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~~~----~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~~k 1454 (2568)
.||||||++|+|.++++.+ |..|+++|||+|+|... +|+.|++++..||.+|++++|||||+.+.|+.. .+
T Consensus 5 DlGTtns~va~~~~g~~~ii~n~~g~~~~PS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~Kr~iG~~~~d~~~---~~ 81 (599)
T TIGR01991 5 DLGTTNSLVASVRSGVPEVLPDAEGRVLLPSVVRYLKDGGVEVGKEALAAAAEDPKNTISSVKRLMGRSIEDIKT---FS 81 (599)
T ss_pred EEccccEEEEEEECCEEEEEECCCCCcccCeEEEEeCCCCEEecHHHHHhhhhChhhhHHHHHHHhCCCccchhh---cc
Confidence 5899999999999998887 89999999999999633 699999999999999999999999999887643 67
Q ss_pred ccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCc
Q psy7639 1455 HWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLN 1534 (2568)
Q Consensus 1455 ~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~ 1534 (2568)
.+||.++....+ ...+.+. ...|+|+||++++|++||+.|+.++|.++.++||||||||++.||++|++||++|||+
T Consensus 82 ~~~~~~~~~~~~-~~~~~~~--~~~~~p~ei~a~iL~~lk~~a~~~lg~~v~~~VItVPa~f~~~qR~a~~~Aa~~AGl~ 158 (599)
T TIGR01991 82 ILPYRFVDGPGE-MVRLRTV--QGTVTPVEVSAEILKKLKQRAEESLGGDLVGAVITVPAYFDDAQRQATKDAARLAGLN 158 (599)
T ss_pred cCCEEEEEcCCC-ceEEEeC--CCEEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCC
Confidence 889998765432 3333333 3479999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHh
Q psy7639 1535 VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKR 1614 (2568)
Q Consensus 1535 v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~ 1614 (2568)
+++|++||+|||++|+.+.. .+.++|||||||||||||++++.+| .++|+++.|+.++||.|||+.|++|+.++
T Consensus 159 v~~li~EPtAAAlay~~~~~--~~~~vlV~DlGgGT~DvSi~~~~~~-~~~vla~~gd~~lGG~d~D~~l~~~l~~~--- 232 (599)
T TIGR01991 159 VLRLLNEPTAAAVAYGLDKA--SEGIYAVYDLGGGTFDVSILKLTKG-VFEVLATGGDSALGGDDFDHALAKWILKQ--- 232 (599)
T ss_pred ceEEecCHHHHHHHHhhccC--CCCEEEEEEcCCCeEEEEEEEEcCC-eEEEEEEcCCCCCCHHHHHHHHHHHHHHh---
Confidence 99999999999999998653 4678999999999999999999776 88999999999999999999999998754
Q ss_pred hhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Q psy7639 1615 KYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLD 1694 (2568)
Q Consensus 1615 ~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~a~~~ 1694 (2568)
++.+...++..+.+|+.+||++|+.||....+.+.++. +|.++.++|||++|+++|+|+++++..+|+++|+++++.
T Consensus 233 -~~~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~--~g~~~~~~itr~efe~l~~~ll~~i~~~i~~~L~~a~~~ 309 (599)
T TIGR01991 233 -LGISADLNPEDQRLLLQAARAAKEALTDAESVEVDFTL--DGKDFKGKLTRDEFEALIQPLVQKTLSICRRALRDAGLS 309 (599)
T ss_pred -hCCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEEEEE--CCcEEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 45555678999999999999999999999888888864 688899999999999999999999999999999999999
Q ss_pred CccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeecccccceeecC
Q psy7639 1695 KSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAG 1774 (2568)
Q Consensus 1695 ~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slGie~~~ 1774 (2568)
+.+|+.|+||||+||||+|+++|+++|+ ..+..++||++|||.|||++|+.+++.. ..+++++.|++|++||+++.+
T Consensus 310 ~~~id~ViLvGGssriP~V~~~l~~~f~-~~~~~~~npdeaVA~GAai~a~~l~~~~--~~~~~~l~dv~p~slgi~~~~ 386 (599)
T TIGR01991 310 VEEIKGVVLVGGSTRMPLVRRAVAELFG-QEPLTDIDPDQVVALGAAIQADLLAGNR--IGNDLLLLDVTPLSLGIETMG 386 (599)
T ss_pred hhhCCEEEEECCcCCChHHHHHHHHHhC-CCCCCCCCCcHHHHHHHHHHHHHhcccc--ccCceEEEEeeeeeeEEEecC
Confidence 9999999999999999999999999995 5566789999999999999999998754 345789999999999999999
Q ss_pred cEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcCCeeEE
Q psy7639 1775 GVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILN 1854 (2568)
Q Consensus 1775 g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~nGiL~ 1854 (2568)
|.|.+||||||+||+++++.|+|..|+|+.+.|.|||||+.++.+|.+||+|.|.++||.|+|.++|+|+|+||.||+|+
T Consensus 387 g~~~~ii~rnt~iP~~~~~~~~t~~d~q~~v~i~i~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~ 466 (599)
T TIGR01991 387 GLVEKIIPRNTPIPVARAQEFTTYKDGQTAMVIHVVQGERELVEDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLT 466 (599)
T ss_pred CEEEEEEeCCCcCCccceEEEEEccCCCeEEEEEEEeecccccccCceEEEEEEcCCCCCCCCCCcEEEEEEECCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHHH
Q psy7639 1855 VTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSR 1934 (2568)
Q Consensus 1855 V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~~~~~~~~~~~~~ 1934 (2568)
|++.+..||++++++|.++ ..||++|+++|++++++++.+|+..+++.+++|++++++|.++..+.+.+..++++++++
T Consensus 467 V~a~~~~t~~~~~~~i~~~-~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (599)
T TIGR01991 467 VSAQEQSTGVEQSIQVKPS-YGLSDEEIERMLKDSFKHAEEDMYARALAEQKVEAERILEALQAALAADGDLLSEDERAA 545 (599)
T ss_pred EEEEECCCCcEEEEecccc-cCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHH
Confidence 9999999999999999865 569999999999999999999999999999999999999999999987777899999999
Q ss_pred HHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhcccccccC
Q psy7639 1935 CREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG 1977 (2568)
Q Consensus 1935 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~ 1977 (2568)
+...++++++||..+ +.++++++.++|++.+.++..+.+.
T Consensus 546 ~~~~l~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 585 (599)
T TIGR01991 546 IDAAMEALQKALQGD---DADAIKAAIEALEEATDNFAARRMD 585 (599)
T ss_pred HHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999854 6789999999999999998876654
No 27
>PRK01433 hscA chaperone protein HscA; Provisional
Probab=100.00 E-value=2.9e-86 Score=877.98 Aligned_cols=517 Identities=35% Similarity=0.541 Sum_probs=456.7
Q ss_pred CCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChh----hhhhccCCCcEEEecCCCceEEEEEcCceeeeChhhhHHH
Q psy7639 1986 DMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPK----IQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSM 2061 (2568)
Q Consensus 1986 ~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~----v~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~peei~a~ 2061 (2568)
+.+++|..| |++++|||||++++|.. +....+. .+.. +...+.+...+ +.|+|+||+||
T Consensus 62 ~~~~vG~~A----------ti~~~KrliG~~~~~~~~~~~~~~~~k~----~~~~-~~~~~~~~~~~--~~~speei~a~ 124 (595)
T PRK01433 62 NNFTIGNNK----------GLRSIKRLFGKTLKEILNTPALFSLVKD----YLDV-NSSELKLNFAN--KQLRIPEIAAE 124 (595)
T ss_pred CCEEECchh----------hHHHHHHHhCCCchhhccchhhHhhhhh----eeec-CCCeeEEEECC--EEEcHHHHHHH
Confidence 447899887 89999999999998732 2221111 1111 22334444444 68999999999
Q ss_pred HHHHHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCC
Q psy7639 2062 VLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGG 2141 (2568)
Q Consensus 2062 iL~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGg 2141 (2568)
+|++||+.|+.++|.++.+|||||||||++.||+||++||++|||+|++|||||||||++||+++. .+.++|||||||
T Consensus 125 iL~~lk~~ae~~lg~~v~~aVITVPa~f~~~qR~a~~~Aa~~AGl~v~~li~EPtAAAlay~~~~~--~~~~vlV~DlGG 202 (595)
T PRK01433 125 IFIYLKNQAEEQLKTNITKAVITVPAHFNDAARGEVMLAAKIAGFEVLRLIAEPTAAAYAYGLNKN--QKGCYLVYDLGG 202 (595)
T ss_pred HHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCcHHHHHHHhcccC--CCCEEEEEECCC
Confidence 999999999999999999999999999999999999999999999999999999999999998764 457899999999
Q ss_pred eeeEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcceeE
Q psy7639 2142 GTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEAS 2221 (2568)
Q Consensus 2142 gt~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~ 2221 (2568)
|||||||+++.+| .|+|++++||.+|||+|||.+|++|++++|. +..+.+++ ..||+||+.||.+..+.
T Consensus 203 GT~DvSi~~~~~~-~~~V~at~gd~~lGG~d~D~~l~~~~~~~~~------~~~~~~~~----~~~ekaK~~LS~~~~~~ 271 (595)
T PRK01433 203 GTFDVSILNIQEG-IFQVIATNGDNMLGGNDIDVVITQYLCNKFD------LPNSIDTL----QLAKKAKETLTYKDSFN 271 (595)
T ss_pred CcEEEEEEEEeCC-eEEEEEEcCCcccChHHHHHHHHHHHHHhcC------CCCCHHHH----HHHHHHHHhcCCCcccc
Confidence 9999999999999 9999999999999999999999999998773 23344443 35999999999987632
Q ss_pred EEEecccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCCCC
Q psy7639 2222 IEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNL 2301 (2568)
Q Consensus 2222 ~~i~~~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~~ 2301 (2568)
+ ..++|||++||++|+|++++++.+++++|++|+ +.+||.|+|||||||||+||++|+++| +.++..
T Consensus 272 ~----------~~~~itr~efe~l~~~l~~~~~~~i~~~L~~a~--~~~Id~ViLvGGssriP~v~~~l~~~f-~~~~~~ 338 (595)
T PRK01433 272 N----------DNISINKQTLEQLILPLVERTINIAQECLEQAG--NPNIDGVILVGGATRIPLIKDELYKAF-KVDILS 338 (595)
T ss_pred c----------ceEEEcHHHHHHHHHHHHHHHHHHHHHHHhhcC--cccCcEEEEECCcccChhHHHHHHHHh-CCCcee
Confidence 2 178999999999999999999999999999999 779999999999999999999999999 467788
Q ss_pred CCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEEEE
Q psy7639 2302 SINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQ 2381 (2568)
Q Consensus 2302 ~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~i~ 2381 (2568)
++|||||||+|||+||++|++ ...++.+.||+|+||||++.+|.+.++|||||+||+++++.|+|..|+|+.+.|+
T Consensus 339 ~~npdeaVA~GAAi~a~~l~~----~~~~~~l~Dv~p~slgi~~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~ 414 (595)
T PRK01433 339 DIDPDKAVVWGAALQAENLIA----PHTNSLLIDVVPLSLGMELYGGIVEKIIMRNTPIPISVVKEFTTYADNQTGIQFH 414 (595)
T ss_pred cCCchHHHHHHHHHHHHHhhC----CccceEEEEecccceEEEecCCEEEEEEECCCcccceeeEEeEeecCCCeEEEEE
Confidence 999999999999999999987 2467899999999999999999999999999999999999999999999999999
Q ss_pred EeecCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHHHH
Q psy7639 2382 VFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMIND 2461 (2568)
Q Consensus 2382 v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~~~ 2461 (2568)
|||||+..+.+|..||+|.|+|+||+|+|.++|+|+|++|.||+|+|++.++.||++..++|... .+||++|+++|+++
T Consensus 415 v~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~i~vtf~id~~Gil~V~a~~~~t~~~~~~~i~~~-~~ls~~ei~~~~~~ 493 (595)
T PRK01433 415 ILQGEREMAADCRSLARFELKGLPPMKAGSIRAEVTFAIDADGILSVSAYEKISNTSHAIEVKPN-HGIDKTEIDIMLEN 493 (595)
T ss_pred EEeccccccCCCcEEEEEEEcCCCCCCCCCccEEEEEEECCCCcEEEEEEEcCCCcEEEEEecCC-CCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999865 56999999999999
Q ss_pred HHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhcCCc----cCHHHHHHHHHH-
Q psy7639 2462 AERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKWLDNNTL----ADKEEYQDKLQQ- 2536 (2568)
Q Consensus 2462 ~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~~~~~~l~~~ek~~i~~~l~e~~~WL~~~~~----a~~ee~~~k~~~- 2536 (2568)
+++++.+|+.++++.+++|++|++++.+++.+++....+++++|++++..+++.++||+.++. ...+++++.++.
T Consensus 494 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 573 (595)
T PRK01433 494 AYKNAKIDYTTRLLQEAVIEAEALIFNIERAIAELTTLLSESEISIINSLLDNIKEAVHARDIILINNSIKEFKSKIKKS 573 (595)
T ss_pred HHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998766789999999999999999999986421 112345555555
Q ss_pred HHHHHHHHHHHHhc
Q psy7639 2537 LQKSCMPLMSKMHG 2550 (2568)
Q Consensus 2537 L~~~~~pi~~r~~e 2550 (2568)
|+..|+|++.++++
T Consensus 574 ~~~~~~~~~~k~~~ 587 (595)
T PRK01433 574 MDTKLNIIINDLLK 587 (595)
T ss_pred HHHHhhHHHHHHhc
Confidence 66666667777765
No 28
>KOG0103|consensus
Probab=100.00 E-value=1.3e-87 Score=829.07 Aligned_cols=554 Identities=37% Similarity=0.574 Sum_probs=509.1
Q ss_pred CCCCCCCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEE-ecCCCceEEEEEcCceeeeChhhhH
Q psy7639 1981 GASAGDMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVV-NDCSKPKIQVEFKGERKTFAPEEIS 2059 (2568)
Q Consensus 1981 ~~~~~~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~-~~~~~~~~~v~~~~~~~~~~peei~ 2059 (2568)
..++...|++|.+|+.+..+|++||+.++|||+||.|+||.+|.+.+++||.++ ..||.+++.+.|.|+.+.|+|++|.
T Consensus 39 vsfg~K~R~~G~aak~~~~~n~kntv~~~KRl~Gr~f~dP~~q~~~~~~~~~vv~~~dg~vgi~v~ylge~~~ft~~Qv~ 118 (727)
T KOG0103|consen 39 VSFGPKNRFIGVAAKNQQTTNVKNTVSNFKRLIGRKFSDPEVQREIKSLPRSVVQLKDGDVGIKVEYLGEKHPFTPEQVL 118 (727)
T ss_pred eeeccccceeeeccccceeecccccchhhhhhhccccCChHhhhcccccchheeecCCCCcceeehcccCCCCCChHHHH
Confidence 345567899999999999999999999999999999999999999999999998 5799999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcC-----CcceE
Q psy7639 2060 SMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLK-----GERNV 2134 (2568)
Q Consensus 2060 a~iL~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~-----~~~~v 2134 (2568)
||+|.+||.+|++.+..+|.+|||+||+||++.||+++.+||++|||+++|||||.||+||+||+.+++. ++++|
T Consensus 119 Am~l~klk~~ae~~l~~~v~DcvIavP~~FTd~qRravldAA~iagLn~lrLmnd~TA~Al~ygiyKtDLP~~~ekpr~v 198 (727)
T KOG0103|consen 119 AMLLTKLKATAEKNLKSPVSDCVIAVPSYFTDSQRRAVLDAARIAGLNPLRLMNDTTATALAYGIYKTDLPENEEKPRNV 198 (727)
T ss_pred HHHHHHHHHHHHHhcCCCCCCeeEeccccccHHHHHHHHhHHhhcCccceeeeecchHhHhhcccccccCCCcccCcceE
Confidence 9999999999999999999999999999999999999999999999999999999999999999998654 46889
Q ss_pred EEEeeCCeeeEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhcc
Q psy7639 2135 LIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTL 2214 (2568)
Q Consensus 2135 lv~DlGggt~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~L 2214 (2568)
+++|+|+++++||++.|..| .+.|++|.+|.+|||+|||..|++||+++|+.+|++|++.|+||..||+.+||+.|++|
T Consensus 199 ~fvD~GHS~~q~si~aF~kG-~lkvl~ta~D~~lGgr~fDe~L~~hfa~efk~kykidv~sn~kA~lRL~~~~EKlKK~l 277 (727)
T KOG0103|consen 199 VFVDIGHSSYQVSIAAFTKG-KLKVLATAFDRKLGGRDFDEALIDHFAKEFKTKYKIDVRSNAKAKLRLLAECEKLKKVL 277 (727)
T ss_pred EEEecccccceeeeeeeccC-cceeeeeecccccccchHHHHHHHHHHHHhccccccchhhchhHHHHHHHHHHHHHHHh
Confidence 99999999999999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeEEEEecccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhc
Q psy7639 2215 SSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFF 2294 (2568)
Q Consensus 2215 S~~~~~~~~i~~~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f 2294 (2568)
|+++.++++|+|++++.|.+..|+|++||+||.++++|+..|+.++|++++++.+||+.|.+|||+||||.|+++|.++|
T Consensus 278 SAN~~~plNIEcfM~d~dvs~~i~ReEfEel~~plL~rv~~p~~~~l~d~~l~~edi~~VEiVGg~sripaike~Is~~F 357 (727)
T KOG0103|consen 278 SANTELPLNIECFMNDKDVSSKIKREEFEELSAPLLERVEVPLLKALADAKLKVEDIHAVEIVGGLSRIPAIKEMISDFF 357 (727)
T ss_pred hcCcCCCcchhheeecchhhhhccHHHHHHHHHHHHHhhhHHHHHHHHHhcCccccceeEEEecCcccchHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEE-----ecCCeeeEeeecCCCCCccceeeEE
Q psy7639 2295 CGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIE-----TAGGVMTKLIERNTRIPCKQTQTFT 2369 (2568)
Q Consensus 2295 ~~~~~~~~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~-----~~~~~~~~li~r~~~iP~~~~~~f~ 2369 (2568)
|+++++++|.|||||+|||+|+|+||+ .|+++++-+.|+.||++.+. .+++....+||+|.++|..+..+|.
T Consensus 358 -gke~s~TlN~dEavarG~ALqcAIlSP--~frVRef~v~Di~pysIs~~w~~~~ed~~~~~evF~~~~~~p~~K~lT~~ 434 (727)
T KOG0103|consen 358 -GKELSRTLNQDEAVARGAALQCAILSP--TFRVREFSVEDIVPYSISLRWVKQGEDGGSVTEVFPKGHPSPSVKLLTFN 434 (727)
T ss_pred -CCcccccccHHHHHHHhHHHHHHhcCc--cccceecceecccceeEEEEeccccccCCCceeeecCCCCCCCceEEEEE
Confidence 899999999999999999999999998 89999999999999999765 2235667899999999999999998
Q ss_pred eccCCCCcEEEEEeec-CcccccCCCceeEEEecCCCCCCCC-CcceEEEEEeCCCeeEEEEeee------c--------
Q psy7639 2370 TYADNQPAVTIQVFEG-ERAMTKDNNLLGTFDLTGIPPAPRG-VPKIDVTFDLDANGILNVTAKD------T-------- 2433 (2568)
Q Consensus 2370 t~~d~q~~~~i~v~~g-e~~~~~~n~~lg~~~l~~i~~~~~g-~~~i~v~f~id~~Gil~v~a~~------~-------- 2433 (2568)
... .+.+.++.. ...++.....|++|.++++.+...| ..+++|.+++|.+||+.|+..- .
T Consensus 435 Rk~----~F~lea~yt~~~~lp~~~~kI~~~~i~~v~~~~~ge~skVKvkvr~n~~Gi~~i~sA~~~e~~~veev~~~~~ 510 (727)
T KOG0103|consen 435 RKG----PFTLEAKYTKVNKLPYPKPKIEKWTITGVTPSEDGEFSKVKVKVRLNEHGIDTIESATLIEDIEVEEVPEEPM 510 (727)
T ss_pred ecC----ceEEEEEeccccccCCCCCceeeEEecccccCccccccceeEEEEEcCccceeeecceeecccchhccccchh
Confidence 654 466666544 4666756679999999999999885 4579999999999999998630 0
Q ss_pred c--------------CCC----cceeEEecC-CCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhh
Q psy7639 2434 S--------------SGK----SQNITIKND-KGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALD 2494 (2568)
Q Consensus 2434 ~--------------t~~----~~~i~i~~~-~~~ls~eei~~~~~~~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~ 2494 (2568)
. .+| ...+.+... .++|+..+++..++++.+|..+|+...++.+++|+||+|||+||++|.
T Consensus 511 e~~~~~~~~~~~~~~~~k~kvk~~~L~~~~~~~~~l~~~~l~~~~e~E~~M~~qD~~~~Et~D~KNaleeyVY~~R~kl~ 590 (727)
T KOG0103|consen 511 EYDDAAKMLERIAPAENKKKVKKVDLPIEAYTKGALITDELELYIEKENKMILQDKLEKETVDAKNALEEYVYDMRDKLS 590 (727)
T ss_pred hhhcchhhhhhhccccccceeeeccccceeeeccccCHHHHHHHHHHHHHhhhhhhhhhhhccHHHHHHHHHHHHHHHhh
Confidence 0 011 011222222 357999999999999999999999999999999999999999999998
Q ss_pred hcc-CCCCHHHHHHHHHHHHHHHHHhhc-CCccCHHHHHHHHHHHHHHHH
Q psy7639 2495 NAG-NKLTESEKSRCREECDATLKWLDN-NTLADKEEYQDKLQQLQKSCM 2542 (2568)
Q Consensus 2495 ~~~-~~l~~~ek~~i~~~l~e~~~WL~~-~~~a~~ee~~~k~~~L~~~~~ 2542 (2568)
+.+ +++++++++++...|+++++|||+ |++.++..|..|+.+|+++..
T Consensus 591 ~~y~~f~~~a~~e~~~~~l~~~E~wlyedGed~~k~~Y~~kl~elk~~g~ 640 (727)
T KOG0103|consen 591 DKYEDFITDAEREKLKKMLTDTEEWLYEDGEDQTKAVYVAKLEELKKLGD 640 (727)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHhcCcccchHHHHHHHHHHHhhhh
Confidence 766 779999999999999999999986 678899999999999999985
No 29
>CHL00094 dnaK heat shock protein 70
Probab=100.00 E-value=7.1e-85 Score=879.40 Aligned_cols=582 Identities=49% Similarity=0.777 Sum_probs=539.7
Q ss_pred HhcccccEEEEEEcccccc--cccCCcccccccccch----hhhhHHHHhhhcCCCccccccccccccccCChhhhhccc
Q psy7639 1381 RISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRCR----EECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMK 1454 (2568)
Q Consensus 1381 ~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~~----~~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~~k 1454 (2568)
.||||||++|++.++.+.+ |..|.+.|||+|+|.. .+|+.|++++..||.+|++++||+||+.+++ +....+
T Consensus 8 DlGTt~s~va~~~~g~~~ii~n~~g~r~~PS~V~f~~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~~--~~~~~~ 85 (621)
T CHL00094 8 DLGTTNSVVAVMEGGKPTVIPNAEGFRTTPSIVAYTKKGDLLVGQIAKRQAVINPENTFYSVKRFIGRKFSE--ISEEAK 85 (621)
T ss_pred EeCcccEEEEEEECCEEEEEECCCCCcccceEEEEcCCCCEEECHHHHHhHHhCccceehhhHHhcCCChHH--HHhhhh
Confidence 5899999999999998877 8999999999999943 2699999999999999999999999999876 445678
Q ss_pred ccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCc
Q psy7639 1455 HWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLN 1534 (2568)
Q Consensus 1455 ~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~ 1534 (2568)
+|||.++... +..+.+.+...+..|+|+++++++|++|++.|+.++|.++.++|||||+||++.||+++++||++|||+
T Consensus 86 ~~~~~v~~~~-~g~i~~~~~~~~~~~s~eei~a~iL~~l~~~ae~~lg~~v~~~VItVPa~f~~~qR~a~~~Aa~~AGl~ 164 (621)
T CHL00094 86 QVSYKVKTDS-NGNIKIECPALNKDFSPEEISAQVLRKLVEDASKYLGETVTQAVITVPAYFNDSQRQATKDAGKIAGLE 164 (621)
T ss_pred cCCeEEEECC-CCCEEEEEecCCeEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCc
Confidence 8999998754 234444555556789999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHh
Q psy7639 1535 VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKR 1614 (2568)
Q Consensus 1535 v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~ 1614 (2568)
+++||+||+|||++|+.+.. .+.++|||||||||||+||+++.++ +++|+++.|+.++||.+||+.|++|+.++|++
T Consensus 165 v~~li~EptAAAlay~~~~~--~~~~vlV~DlGgGT~DvSv~~~~~~-~~~vla~~gd~~lGG~d~D~~l~~~~~~~~~~ 241 (621)
T CHL00094 165 VLRIINEPTAASLAYGLDKK--NNETILVFDLGGGTFDVSILEVGDG-VFEVLSTSGDTHLGGDDFDKKIVNWLIKEFKK 241 (621)
T ss_pred eEEEeccHHHHHHHhccccC--CCCEEEEEEcCCCeEEEEEEEEcCC-EEEEEEEecCCCcChHHHHHHHHHHHHHHHHH
Confidence 99999999999999997653 4578999999999999999999766 89999999999999999999999999999999
Q ss_pred hhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccC----CcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHH
Q psy7639 1615 KYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYD----GIDFYTKISRARFEELCSDLFRSTLQPVEKALQD 1690 (2568)
Q Consensus 1615 ~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~----~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~ 1690 (2568)
+++.++..+++.+.+|+.+||++|+.||...++.+.++.+.. +.++...|||++||++|+|+++++..+|+++|++
T Consensus 242 ~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~fe~l~~~l~~~~~~~i~~~L~~ 321 (621)
T CHL00094 242 KEGIDLSKDRQALQRLTEAAEKAKIELSNLTQTEINLPFITATQTGPKHIEKTLTRAKFEELCSDLINRCRIPVENALKD 321 (621)
T ss_pred HhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeecccCCCCCeeEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888889999999999999999999998889998886542 2468889999999999999999999999999999
Q ss_pred cCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeecccccce
Q psy7639 1691 AKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGI 1770 (2568)
Q Consensus 1691 a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slGi 1770 (2568)
+++.+.+|+.|+||||+||+|.|++.|+++|+ ..+...+||++|||+|||++|+++++. .+++++.|++|++||+
T Consensus 322 a~~~~~~i~~ViLvGGssriP~v~~~l~~~fg-~~~~~~~~pdeava~GAA~~aa~ls~~----~~~~~~~d~~~~~lgi 396 (621)
T CHL00094 322 AKLDKSDIDEVVLVGGSTRIPAIQELVKKLLG-KKPNQSVNPDEVVAIGAAVQAGVLAGE----VKDILLLDVTPLSLGV 396 (621)
T ss_pred cCCChhhCcEEEEECCccCChHHHHHHHHHhC-CCcCcCCCchhHHHhhhHHHHHHhcCC----ccceeeeeeeceeeee
Confidence 99999999999999999999999999999995 567788999999999999999999873 4678999999999999
Q ss_pred eecCcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcCC
Q psy7639 1771 ETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDAN 1850 (2568)
Q Consensus 1771 e~~~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~n 1850 (2568)
++.+|.|.+||||||+||+++++.|++..|+|+.+.|.||||++.++.+|..||+|.+.++||.|+|.++|+|+|++|.|
T Consensus 397 ~~~~~~~~~ii~~~t~iP~~~~~~~~~~~~~q~~v~i~i~~ge~~~~~~n~~lg~~~i~~~~~~~~g~~~i~v~f~id~~ 476 (621)
T CHL00094 397 ETLGGVMTKIIPRNTTIPTKKSEVFSTAVDNQTNVEIHVLQGERELAKDNKSLGTFRLDGIPPAPRGVPQIEVTFDIDAN 476 (621)
T ss_pred eccCCEEEEEEeCCCccceeeeEEEEeccCCCcEEEEEEEeeccccCCCCCEEEEEEEeCCCCCCCCCCcEEEEEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHH
Q psy7639 1851 GILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTES 1930 (2568)
Q Consensus 1851 GiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~~~~~~~~~ 1930 (2568)
|+|+|++.+..||++..++|.+ ..+||++|++++++++.++..+|+..+++.++||.+|+++|.+++.|+++...++++
T Consensus 477 Gil~v~~~~~~t~~~~~~~i~~-~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~le~~i~~~~~~l~~~~~~~~~~ 555 (621)
T CHL00094 477 GILSVTAKDKGTGKEQSITIQG-ASTLPKDEVERMVKEAEKNAAEDKEKREKIDLKNQAESLCYQAEKQLKELKDKISEE 555 (621)
T ss_pred CeEEEEEeeccCCceeeeeecc-chhccHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhHHHHHHHHHHHHHHhccCCHH
Confidence 9999999999999999999985 457999999999999999999999999999999999999999999998777788999
Q ss_pred HHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhcccccccC
Q psy7639 1931 EKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG 1977 (2568)
Q Consensus 1931 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~ 1977 (2568)
+++++.+.++++++||..+ +.++|++++++|+..+.|+..++|.
T Consensus 556 ~~~~~~~~l~~~~~wl~~~---~~~~~~~~~~~l~~~~~~~~~kl~~ 599 (621)
T CHL00094 556 KKEKIENLIKKLRQALQND---NYESIKSLLEELQKALMEIGKEVYS 599 (621)
T ss_pred HHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999754 5689999999999999999998887
No 30
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=100.00 E-value=6.3e-85 Score=874.81 Aligned_cols=574 Identities=38% Similarity=0.596 Sum_probs=523.7
Q ss_pred HHHhcccccEEEEEEcccccc--cccCCcccccccccchh---hhhHHHHhhhcCCCccccccccccccccCChhhhhcc
Q psy7639 1379 KERISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRCRE---ECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDM 1453 (2568)
Q Consensus 1379 ~~~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~~~---~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~~ 1453 (2568)
...||||||++|++.++++.+ |..|++.|||+|+|... +|+.|+.++..+|.+|++++|||||+.++|. +...
T Consensus 23 GIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~f~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~~~d~--~~~~ 100 (616)
T PRK05183 23 GIDLGTTNSLVATVRSGQAEVLPDEQGRVLLPSVVRYLEDGIEVGYEARANAAQDPKNTISSVKRFMGRSLADI--QQRY 100 (616)
T ss_pred EEEeccccEEEEEEECCEEEEEEcCCCCeecCeEEEEcCCCEEEcHHHHHhhHhCchhhHHHHHHHhCCCchhh--hhhh
Confidence 346999999999999998887 89999999999999644 6999999999999999999999999998774 3446
Q ss_pred cccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCC
Q psy7639 1454 KHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGL 1533 (2568)
Q Consensus 1454 k~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL 1533 (2568)
+.+||.+..... ....+... ...++|+||++++|++|++.|+.++|.++.++||||||||++.||+++++||++|||
T Consensus 101 ~~~~~~~~~~~~-g~~~~~~~--~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl 177 (616)
T PRK05183 101 PHLPYQFVASEN-GMPLIRTA--QGLKSPVEVSAEILKALRQRAEETLGGELDGAVITVPAYFDDAQRQATKDAARLAGL 177 (616)
T ss_pred hcCCeEEEecCC-CceEEEec--CCeEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 788998876532 22333332 347999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHH
Q psy7639 1534 NVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFK 1613 (2568)
Q Consensus 1534 ~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~ 1613 (2568)
++++||+||+|||++|+.+.. .++++||||+||||||||++++.+| .++|+++.|+.++||.|||+.|++|+.++|.
T Consensus 178 ~v~~li~EPtAAAlay~~~~~--~~~~vlV~DlGGGT~DvSv~~~~~~-~~evlat~gd~~lGG~d~D~~l~~~~~~~~~ 254 (616)
T PRK05183 178 NVLRLLNEPTAAAIAYGLDSG--QEGVIAVYDLGGGTFDISILRLSKG-VFEVLATGGDSALGGDDFDHLLADWILEQAG 254 (616)
T ss_pred CeEEEecchHHHHHHhhcccC--CCCEEEEEECCCCeEEEEEEEeeCC-EEEEEEecCCCCcCHHHHHHHHHHHHHHHcC
Confidence 999999999999999998653 4678999999999999999999766 8899999999999999999999999887654
Q ss_pred hhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Q psy7639 1614 RKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKL 1693 (2568)
Q Consensus 1614 ~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~a~~ 1693 (2568)
.+...++..+.+|+.+||++|+.||....+.+.++.+ ...|||++|+++|+|+++++..+++++|+++++
T Consensus 255 ----~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~~------~~~itr~efe~l~~~l~~~~~~~i~~~L~~a~~ 324 (616)
T PRK05183 255 ----LSPRLDPEDQRLLLDAARAAKEALSDADSVEVSVALW------QGEITREQFNALIAPLVKRTLLACRRALRDAGV 324 (616)
T ss_pred ----CCcCCCHHHHHHHHHHHHHHHHhcCCCceEEEEEecC------CCeEcHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4444678999999999999999999998888888532 224999999999999999999999999999999
Q ss_pred CCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeecccccceeec
Q psy7639 1694 DKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETA 1773 (2568)
Q Consensus 1694 ~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slGie~~ 1773 (2568)
.+.+|+.|+||||+||||+|++.|+++|+ ..+..++||++|||+|||+||+++++.. ..+++++.|++|++||+++.
T Consensus 325 ~~~~i~~ViLvGGssriP~v~~~l~~~fg-~~~~~~~npdeaVA~GAAi~a~~l~~~~--~~~~~~l~dv~p~slgi~~~ 401 (616)
T PRK05183 325 EADEVKEVVMVGGSTRVPLVREAVGEFFG-RTPLTSIDPDKVVAIGAAIQADILAGNK--PDSDMLLLDVIPLSLGLETM 401 (616)
T ss_pred CcccCCEEEEECCcccChHHHHHHHHHhc-cCcCcCCCchHHHHHHHHHHHHHhcccc--ccCceEEEeeccccccceec
Confidence 99999999999999999999999999995 4556789999999999999999998864 24578999999999999999
Q ss_pred CcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcCCeeE
Q psy7639 1774 GGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGIL 1853 (2568)
Q Consensus 1774 ~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~nGiL 1853 (2568)
+|.|.+||||||+||+++++.|++..|+|+.+.|.|||||+.++.+|.+||+|.|.++||.|+|.++|+|+|++|.||+|
T Consensus 402 ~g~~~~ii~r~t~iP~~~~~~~~t~~d~q~~v~i~v~qGe~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~~d~~Gil 481 (616)
T PRK05183 402 GGLVEKIIPRNTTIPVARAQEFTTFKDGQTAMAIHVVQGERELVADCRSLARFELRGIPPMAAGAARIRVTFQVDADGLL 481 (616)
T ss_pred CCeEEEEEeCCCcccccccEEEEeccCCCeEEEEEEecccccccccccEEEEEEeCCCCCCCCCCccEEEEEEECCCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHHH
Q psy7639 1854 NVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKS 1933 (2568)
Q Consensus 1854 ~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~~~~~~~~~~~~ 1933 (2568)
+|+|++..||++.+++|+++ ..||++||++|++++++++.+|+..+++.++||+++.++|.++..+++.+..+++++++
T Consensus 482 ~V~a~~~~~~~~~~~~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 560 (616)
T PRK05183 482 SVTAMEKSTGVEASIQVKPS-YGLTDDEIARMLKDSMSHAEEDMQARALAEQKVEAERVLEALQAALAADGDLLSAAERA 560 (616)
T ss_pred EEEEEEcCCCcEEEeccccc-ccCCHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHHH
Confidence 99999999999999999865 45999999999999999999999999999999999999999999997777888999999
Q ss_pred HHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhcccccccC
Q psy7639 1934 RCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG 1977 (2568)
Q Consensus 1934 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~ 1977 (2568)
++...++++++||+.+ +.+.|++++++|++.+.++..+.|+
T Consensus 561 ~~~~~l~~~~~~l~~~---d~~~~~~~~~~l~~~~~~~~~~~~~ 601 (616)
T PRK05183 561 AIDAAMAALREVAQGD---DADAIEAAIKALDKATQEFAARRMD 601 (616)
T ss_pred HHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999865 7899999999999999999876664
No 31
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=100.00 E-value=4.8e-85 Score=883.35 Aligned_cols=580 Identities=52% Similarity=0.815 Sum_probs=537.7
Q ss_pred HhcccccEEEEEEcccccc--cccCCcccccccccchh----hhhHHHHhhhcCCCccccccccccccccCChhhhhccc
Q psy7639 1381 RISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRCRE----ECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMK 1454 (2568)
Q Consensus 1381 ~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~~~----~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~~k 1454 (2568)
.||||||++|++.++.+.+ |..|++.|||+|+|..+ +|+.|+.++..||.+|++++|||||+.+++ ++...+
T Consensus 6 DlGtt~s~va~~~~g~~~ii~n~~~~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG~~~~~--~~~~~~ 83 (595)
T TIGR02350 6 DLGTTNSCVAVMEGGEPVVIPNAEGARTTPSVVAFTKNGERLVGQPAKRQAVTNPENTIYSIKRFMGRRFDE--VTEEAK 83 (595)
T ss_pred EeCcccEEEEEEECCEEEEEECCCCCcccCeEEEEeCCCCEEECHHHHHhhhhCchhhhHHHHHHhCCCchH--HHHHhh
Confidence 5899999999999998887 99999999999999633 599999999999999999999999998844 566678
Q ss_pred ccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCc
Q psy7639 1455 HWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLN 1534 (2568)
Q Consensus 1455 ~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~ 1534 (2568)
+|||.+....+ ...+.+ .++.|+|+++++++|++|++.|+.++|.++.++||||||+|++.||++|++||++|||+
T Consensus 84 ~~~~~v~~~~~--~~~~~v--~~~~~~peel~a~~L~~l~~~a~~~~~~~v~~~VItVPa~f~~~qR~a~~~Aa~~AGl~ 159 (595)
T TIGR02350 84 RVPYKVVGDGG--DVRVKV--DGKEYTPQEISAMILQKLKKDAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGKIAGLE 159 (595)
T ss_pred cCCeeEEcCCC--ceEEEE--CCEEecHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCc
Confidence 99999443332 333344 36789999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHh
Q psy7639 1535 VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKR 1614 (2568)
Q Consensus 1535 v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~ 1614 (2568)
+++|++||+|||++|+.... ..++++|||||||||||+|++++.++ .++|+++.|+.++||.+||+.|++|+.++|.+
T Consensus 160 v~~li~EptAAAl~y~~~~~-~~~~~vlV~D~Gggt~dvsv~~~~~~-~~~v~~~~gd~~lGG~d~D~~l~~~~~~~~~~ 237 (595)
T TIGR02350 160 VLRIINEPTAAALAYGLDKS-KKDEKILVFDLGGGTFDVSILEIGDG-VFEVLSTAGDTHLGGDDFDQRIIDWLADEFKK 237 (595)
T ss_pred eEEEecchHHHHHHHhhccc-CCCcEEEEEECCCCeEEEEEEEecCC-eEEEEEecCCcccCchhHHHHHHHHHHHHHHH
Confidence 99999999999999987653 34688999999999999999999766 89999999999999999999999999999999
Q ss_pred hhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccC----CcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHH
Q psy7639 1615 KYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYD----GIDFYTKISRARFEELCSDLFRSTLQPVEKALQD 1690 (2568)
Q Consensus 1615 ~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~----~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~ 1690 (2568)
+++.++..++..+.+|+.+||++|+.||....+.+.++.+.. +.++.++|||++|+++|+|+++++..+|+++|++
T Consensus 238 ~~~~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itr~~fe~l~~~l~~~~~~~i~~~l~~ 317 (595)
T TIGR02350 238 EEGIDLSKDKMALQRLKEAAEKAKIELSSVLSTEINLPFITADASGPKHLEMTLTRAKFEELTADLVERTKEPVRQALKD 317 (595)
T ss_pred hhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEeeecccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888889999999999999999999999999998886543 3568889999999999999999999999999999
Q ss_pred cCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeecccccce
Q psy7639 1691 AKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGI 1770 (2568)
Q Consensus 1691 a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slGi 1770 (2568)
+++.+.+|+.|+||||+||+|+|++.|+++|+ ..+..++||++|||+|||++|+.+++. ++++.+.|++|++||+
T Consensus 318 a~~~~~~i~~V~LvGGssriP~v~~~i~~~f~-~~~~~~~~pdeava~GAa~~aa~l~~~----~~~~~~~d~~~~~igi 392 (595)
T TIGR02350 318 AGLSASDIDEVILVGGSTRIPAVQELVKDFFG-KEPNKSVNPDEVVAIGAAIQGGVLKGD----VKDVLLLDVTPLSLGI 392 (595)
T ss_pred cCCCHhHCcEEEEECCcccChHHHHHHHHHhC-CcccCCcCcHHHHHHHHHHHHHHhcCC----cccceeeecccceeEE
Confidence 99999999999999999999999999999996 667889999999999999999999875 4678999999999999
Q ss_pred eecCcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcCC
Q psy7639 1771 ETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDAN 1850 (2568)
Q Consensus 1771 e~~~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~n 1850 (2568)
++.+|.+.+|||||+++|++++++|++..|+|+.+.|.||||++..+.+|..||+|.+.++||.|+|.++|+|+|++|.|
T Consensus 393 ~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~v~i~i~~ge~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~f~~d~~ 472 (595)
T TIGR02350 393 ETLGGVMTKLIERNTTIPTKKSQVFSTAADNQPAVDIHVLQGERPMAADNKSLGRFELTGIPPAPRGVPQIEVTFDIDAN 472 (595)
T ss_pred EecCCceEEEEeCCCcCCccceEeeeccCCCCcEEEEEEEeecccccccCcEeEEEEECCCCCCCCCCceEEEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHH
Q psy7639 1851 GILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTES 1930 (2568)
Q Consensus 1851 GiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~~~~~~~~~ 1930 (2568)
|+|+|++.+..+|++.+++|+.+ .+||++|++++.+++.++..+|+..+++.++||++|+++|.+++.|++....++++
T Consensus 473 G~l~v~~~~~~~~~~~~~~i~~~-~~ls~~~~~~~~~~~~~~~~~D~~~~~~~e~kn~lEs~iy~~r~~l~~~~~~~~~~ 551 (595)
T TIGR02350 473 GILHVSAKDKGTGKEQSITITAS-SGLSEEEIERMVKEAEANAEEDKKRKEEIEARNNADSLAYQAEKTLKEAGDKLPAE 551 (595)
T ss_pred CeEEEEEEEccCCceEEEEeccc-cccCHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHH
Confidence 99999999999999999999875 57999999999999999999999999999999999999999999997777789999
Q ss_pred HHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhcccccccC
Q psy7639 1931 EKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG 1977 (2568)
Q Consensus 1931 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~ 1977 (2568)
+++++.+.++++++||+.+ +.++|++++++|++.+.+++.++|+
T Consensus 552 e~~~l~~~l~~~~~wL~~~---d~~~i~~~~~~l~~~~~~~~~~~~~ 595 (595)
T TIGR02350 552 EKEKIEKAVAELKEALKGE---DVEEIKAKTEELQQALQKLAEAMYQ 595 (595)
T ss_pred HHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999865 6789999999999999999888764
No 32
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.9e-85 Score=860.42 Aligned_cols=562 Identities=55% Similarity=0.804 Sum_probs=532.1
Q ss_pred HHhcccccEEEEEEcc-cccc--cccCCcccccccccchh----hhhHHHHhhhcCCCccccccccccccccCChhhhhc
Q psy7639 1380 ERISARNNLEAYVFNV-KQAL--DNAGNKLTESEKSRCRE----ECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQD 1452 (2568)
Q Consensus 1380 ~~lGttns~~a~~~~~-~~~~--n~~g~~~tPS~v~~~~~----~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~ 1452 (2568)
..||||||++|++..+ .+.+ |.+|+++|||+|+|..+ +|..|++++..||.+|++.+||+||+...
T Consensus 10 IDlGTTNS~vA~~~~~~~~~vi~n~~g~r~~PSvv~f~~~~~~~vG~~A~~q~~~~p~~t~~~~kr~~G~~~~------- 82 (579)
T COG0443 10 IDLGTTNSVVAVMRGGGLPKVIENAEGERLTPSVVAFSKNGEVLVGQAAKRQAVDNPENTIFSIKRKIGRGSN------- 82 (579)
T ss_pred EEcCCCcEEEEEEeCCCCceEecCCCCCcccceEEEECCCCCEEecHHHHHHhhhCCcceEEEEehhcCCCCC-------
Confidence 3599999999999987 5555 99999999999999633 59999999999999999999999998621
Q ss_pred ccccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcC
Q psy7639 1453 MKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAG 1532 (2568)
Q Consensus 1453 ~k~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AG 1532 (2568)
...+.+.+. ++.|+|+||++++|++||+.||.++|..+.++||||||||++.||+++++||++||
T Consensus 83 -------------~~~~~~~~~--~~~~~~eeisa~~L~~lk~~ae~~lg~~v~~~VItVPayF~d~qR~at~~A~~iaG 147 (579)
T COG0443 83 -------------GLKISVEVD--GKKYTPEEISAMILTKLKEDAEAYLGEKVTDAVITVPAYFNDAQRQATKDAARIAG 147 (579)
T ss_pred -------------CCcceeeeC--CeeeCHHHHHHHHHHHHHHHHHHhhCCCcceEEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 111334443 48899999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHH
Q psy7639 1533 LNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 1612 (2568)
Q Consensus 1533 L~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~ 1612 (2568)
|++++|+|||||||++|+.+.. .+.+|||||+||||||+||+++.+| +++|+++.||++|||+|||.+|+.|+.++|
T Consensus 148 l~vlrlinEPtAAAlayg~~~~--~~~~vlV~DlGGGTfDvSll~~~~g-~~ev~at~gd~~LGGddfD~~l~~~~~~~f 224 (579)
T COG0443 148 LNVLRLINEPTAAALAYGLDKG--KEKTVLVYDLGGGTFDVSLLEIGDG-VFEVLATGGDNHLGGDDFDNALIDYLVMEF 224 (579)
T ss_pred CCeEEEecchHHHHHHhHhccC--CCcEEEEEEcCCCCEEEEEEEEcCC-EEEEeecCCCcccCchhHHHHHHHHHHHHh
Confidence 9999999999999999999875 6789999999999999999999877 999999999999999999999999999999
Q ss_pred HhhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHHcC
Q psy7639 1613 KRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAK 1692 (2568)
Q Consensus 1613 ~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~a~ 1692 (2568)
+.+++.++..++..+++|+.+||++|+.||...++.+++++...++++..+|||++||+++.+++++++.++.++|++++
T Consensus 225 ~~~~~~d~~~~~~~~~rL~~~ae~aK~~LS~~~~~~i~~~~~~~~~~~~~~ltR~~~E~l~~dll~r~~~~~~~al~~a~ 304 (579)
T COG0443 225 KGKGGIDLRSDKAALQRLREAAEKAKIELSSATQTSINLPSIGGDIDLLKELTRAKFEELILDLLERTIEPVEQALKDAG 304 (579)
T ss_pred hccCCccccccHHHHHHHHHHHHHHHHHcccccccccchhhccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999998888888899999999999999999999999999999999
Q ss_pred CCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeecccccceee
Q psy7639 1693 LDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIET 1772 (2568)
Q Consensus 1693 ~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slGie~ 1772 (2568)
+.+.+|+.|+||||+||||.|++.++++|+ +.+...+||+++||+|||+||+.+++..+ +++++|++|+|+|+++
T Consensus 305 l~~~~I~~VilvGGstriP~V~~~v~~~f~-~~~~~~inpdeava~GAa~qa~~l~~~~~----d~ll~Dv~plslgie~ 379 (579)
T COG0443 305 LEKSDIDLVILVGGSTRIPAVQELVKEFFG-KEPEKSINPDEAVALGAAIQAAVLSGEVP----DVLLLDVIPLSLGIET 379 (579)
T ss_pred CChhhCceEEEccceeccHHHHHHHHHHhC-ccccccCCccHHHHHHHHHHHHhhcCccc----CceEEeeeeecccccc
Confidence 999999999999999999999999999996 88889999999999999999999998653 8999999999999999
Q ss_pred cCcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcCCee
Q psy7639 1773 AGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGI 1852 (2568)
Q Consensus 1773 ~~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~nGi 1852 (2568)
.++.+.++|+||+++|++++..|+|..|+|+.+.+.+++||+.+..+|..+|.|.+.++||.|+|.++|+|+|++|.||+
T Consensus 380 ~~~~~~~ii~rn~~iP~~~~~~f~t~~d~q~~~~i~v~qge~~~~~~~~~lg~f~l~~i~~~~~g~~~i~v~f~iD~~gi 459 (579)
T COG0443 380 LGGVRTPIIERNTTIPVKKSQEFSTAADGQTAVAIHVFQGEREMAADNKSLGRFELDGIPPAPRGVPQIEVTFDIDANGI 459 (579)
T ss_pred CcchhhhHHhcCCCCCcccceEEEeecCCCceeEEEEEecchhhcccCceeEEEECCCCCCCCCCCCceEEEeccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHHH
Q psy7639 1853 LNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEK 1932 (2568)
Q Consensus 1853 L~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~~~~~~~~~~~ 1932 (2568)
++|+++++.+|++.+++|..+.+ ||+++|++|+++++.++++|++.++.++.||+++.+++.++..|.+.. +.+..++
T Consensus 460 ~~v~a~~~~~~k~~~i~i~~~~~-ls~~~i~~~~~~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~ 537 (579)
T COG0443 460 LNVTAKDLGTGKEQSITIKASSG-LSDEEIERMVEDAEANAALDKKFRELVEARNEAESLIYSLEKALKEIV-KVSEEEK 537 (579)
T ss_pred eEeeeecccCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHhhhc-cCCHHHH
Confidence 99999999999999999999988 999999999999999999999899999999999999999999998888 9999999
Q ss_pred HHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHhhhcccccccC
Q psy7639 1933 SRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHG 1977 (2568)
Q Consensus 1933 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~ 1977 (2568)
+++...+++++.||.. + .++++.+.++|+....++.+.+|+
T Consensus 538 ~~~~~~~~~~~~~l~~-~---~~~~~~~~~~l~~~~~~~~~~~~~ 578 (579)
T COG0443 538 EKIEEAITDLEEALEG-E---KEEIKAKIEELQEVTQKLAEKKYQ 578 (579)
T ss_pred HHHHHHHHHHHHHHhc-c---HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999986 2 899999999999999999888875
No 33
>PRK01433 hscA chaperone protein HscA; Provisional
Probab=100.00 E-value=4.4e-83 Score=847.71 Aligned_cols=552 Identities=34% Similarity=0.504 Sum_probs=485.9
Q ss_pred HHHhcccccEEEEEEcccccc--cccCCcccccccccchh---hhhHHHHhhhcCCCccccccccccccccCCh----hh
Q psy7639 1379 KERISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRCRE---ECDAAKNQVAMNPKNTVFDAKRLIGRKFDDP----KI 1449 (2568)
Q Consensus 1379 ~~~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~~~---~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~----~~ 1449 (2568)
...||||||++|++.++++.+ |..|+++|||+|+|.+. +|+.| |++++||+||+.++|. ..
T Consensus 23 GIDlGTT~S~va~~~~~~~~ii~n~~g~~~tPS~V~f~~~~~~vG~~A----------ti~~~KrliG~~~~~~~~~~~~ 92 (595)
T PRK01433 23 GIDFGTTNSLIAIATNRKVKVIKSIDDKELIPTTIDFTSNNFTIGNNK----------GLRSIKRLFGKTLKEILNTPAL 92 (595)
T ss_pred EEEcCcccEEEEEEeCCeeEEEECCCCCeecCeEEEEcCCCEEECchh----------hHHHHHHHhCCCchhhccchhh
Confidence 346999999999999888877 89999999999999643 58877 8999999999998763 22
Q ss_pred hhcccccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHH
Q psy7639 1450 QQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGA 1529 (2568)
Q Consensus 1450 ~~~~k~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~ 1529 (2568)
+..++++ +. ..+..+. +...++.|+|+||++++|++||+.|+.++|.++.++||||||||++.||++|++||+
T Consensus 93 ~~~~k~~----~~-~~~~~~~--~~~~~~~~speei~a~iL~~lk~~ae~~lg~~v~~aVITVPa~f~~~qR~a~~~Aa~ 165 (595)
T PRK01433 93 FSLVKDY----LD-VNSSELK--LNFANKQLRIPEIAAEIFIYLKNQAEEQLKTNITKAVITVPAHFNDAARGEVMLAAK 165 (595)
T ss_pred Hhhhhhe----ee-cCCCeeE--EEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHHH
Confidence 2222221 11 1122233 333568899999999999999999999999999999999999999999999999999
Q ss_pred HcCCceEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHH
Q psy7639 1530 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 1609 (2568)
Q Consensus 1530 ~AGL~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~ 1609 (2568)
+|||+++++++||+|||++|+.+.. ...++|||||||||||||++++.+| .++|+++.|+.++||+|||.+|++|+.
T Consensus 166 ~AGl~v~~li~EPtAAAlay~~~~~--~~~~vlV~DlGGGT~DvSi~~~~~~-~~~V~at~gd~~lGG~d~D~~l~~~~~ 242 (595)
T PRK01433 166 IAGFEVLRLIAEPTAAAYAYGLNKN--QKGCYLVYDLGGGTFDVSILNIQEG-IFQVIATNGDNMLGGNDIDVVITQYLC 242 (595)
T ss_pred HcCCCEEEEecCcHHHHHHHhcccC--CCCEEEEEECCCCcEEEEEEEEeCC-eEEEEEEcCCcccChHHHHHHHHHHHH
Confidence 9999999999999999999998653 3568999999999999999999777 889999999999999999999999998
Q ss_pred HHHHhhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHHH
Q psy7639 1610 EEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQ 1689 (2568)
Q Consensus 1610 ~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~ 1689 (2568)
.+|... .+.. .++.||++|+.||......+ ..++|||++|+++|+|+++++..+++++|+
T Consensus 243 ~~~~~~------~~~~----~~~~~ekaK~~LS~~~~~~~----------~~~~itr~efe~l~~~l~~~~~~~i~~~L~ 302 (595)
T PRK01433 243 NKFDLP------NSID----TLQLAKKAKETLTYKDSFNN----------DNISINKQTLEQLILPLVERTINIAQECLE 302 (595)
T ss_pred HhcCCC------CCHH----HHHHHHHHHHhcCCCccccc----------ceEEEcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 766321 1222 33469999999997654321 156899999999999999999999999999
Q ss_pred HcCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeecccccc
Q psy7639 1690 DAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLG 1769 (2568)
Q Consensus 1690 ~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slG 1769 (2568)
+++ +.+|+.|+||||+||+|+||++|+++|+ ..+..++||++|||+|||++|+.+++.. .+++++|++|+|||
T Consensus 303 ~a~--~~~Id~ViLvGGssriP~v~~~l~~~f~-~~~~~~~npdeaVA~GAAi~a~~l~~~~----~~~~l~Dv~p~slg 375 (595)
T PRK01433 303 QAG--NPNIDGVILVGGATRIPLIKDELYKAFK-VDILSDIDPDKAVVWGAALQAENLIAPH----TNSLLIDVVPLSLG 375 (595)
T ss_pred hcC--cccCcEEEEECCcccChhHHHHHHHHhC-CCceecCCchHHHHHHHHHHHHHhhCCc----cceEEEEecccceE
Confidence 998 6789999999999999999999999995 5677789999999999999999998743 47889999999999
Q ss_pred eeecCcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcC
Q psy7639 1770 IETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDA 1849 (2568)
Q Consensus 1770 ie~~~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~ 1849 (2568)
+++.+|.|.+||||||+||+++++.|+|..|+|+.+.|.|||||+.++.+|..||+|.|.++||.|+|.++|+|+|++|.
T Consensus 376 i~~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~i~vtf~id~ 455 (595)
T PRK01433 376 MELYGGIVEKIIMRNTPIPISVVKEFTTYADNQTGIQFHILQGEREMAADCRSLARFELKGLPPMKAGSIRAEVTFAIDA 455 (595)
T ss_pred EEecCCEEEEEEECCCcccceeeEEeEeecCCCeEEEEEEEeccccccCCCcEEEEEEEcCCCCCCCCCccEEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCH
Q psy7639 1850 NGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTE 1929 (2568)
Q Consensus 1850 nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~~~~~~~~ 1929 (2568)
||+|+|+|.+..||++++++|.++ ..||++|+++|+++++++..+|...+++++++|+++++++..++.+++...+++.
T Consensus 456 ~Gil~V~a~~~~t~~~~~~~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 534 (595)
T PRK01433 456 DGILSVSAYEKISNTSHAIEVKPN-HGIDKTEIDIMLENAYKNAKIDYTTRLLQEAVIEAEALIFNIERAIAELTTLLSE 534 (595)
T ss_pred CCcEEEEEEEcCCCcEEEEEecCC-CCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCH
Confidence 999999999999999999999865 4599999999999999999999999999999999999999999999887788999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCcc----CHHHHHHHHHH-HHHhhhcccccccCC
Q psy7639 1930 SEKSRCREECDATLKWLDNNTLA----DKEEYQDKLQQ-LQKSCMPLMSKMHGG 1978 (2568)
Q Consensus 1930 ~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~-l~~~~~~~~~~~y~~ 1978 (2568)
++++.+...++++++||+.+... ..+++++.+++ |+..|+|++.+||++
T Consensus 535 ~~~~~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 588 (595)
T PRK01433 535 SEISIINSLLDNIKEAVHARDIILINNSIKEFKSKIKKSMDTKLNIIINDLLKG 588 (595)
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcc
Confidence 99999999999999999755221 23455566666 777899999999974
No 34
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B ....
Probab=100.00 E-value=3.7e-82 Score=867.06 Aligned_cols=557 Identities=50% Similarity=0.842 Sum_probs=520.8
Q ss_pred CCCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEEe-cCCCceEEEEEcCceeeeChhhhHHHHH
Q psy7639 1985 GDMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVN-DCSKPKIQVEFKGERKTFAPEEISSMVL 2063 (2568)
Q Consensus 1985 ~~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~~peei~a~iL 2063 (2568)
++++++|..|+.++.++|+++++++|||||++|+++.++.+.+.+||.++. ++|.+.+.+.+.++...|+|++|++|+|
T Consensus 41 ~~~~~~G~~a~~~~~~~~~~~~~~~k~liG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 120 (602)
T PF00012_consen 41 DNERLVGEDAKSQMIRNPKNTIYNLKRLIGRKFDDPDVQKEKKKFPYKVVEDPDGKVYFEVDYDGKSKTYSPEELSAMIL 120 (602)
T ss_dssp SSCEEETHHHHHTTTTSGGGEEESGGGTTTSBTTSHHHHHHHTTSSSEEEEETTTEEEEEEEETTEEEEEEHHHHHHHHH
T ss_pred eecccCCcchhhhcccccccccccccccccccccccccchhhhcccccccccccccccccccccccceeeeeecccccch
Confidence 357899999999999999999999999999999999999999999999985 4888999999888778999999999999
Q ss_pred HHHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCee
Q psy7639 2064 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGT 2143 (2568)
Q Consensus 2064 ~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt 2143 (2568)
++|++.|+.++|.++.++||||||||++.||+++++||++|||++++||+||||||++|++.+.. .++++||||+||||
T Consensus 121 ~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~~~~Aa~~agl~~~~li~Ep~Aaa~~y~~~~~~-~~~~vlv~D~Gggt 199 (602)
T PF00012_consen 121 KYLKEMAEKYLGEKVTDVVITVPAYFTDEQRQALRDAAELAGLNVLRLINEPTAAALAYGLERSD-KGKTVLVVDFGGGT 199 (602)
T ss_dssp HHHHHHHHHHHTSBEEEEEEEE-TT--HHHHHHHHHHHHHTT-EEEEEEEHHHHHHHHTTTTSSS-SEEEEEEEEEESSE
T ss_pred hhhcccchhhcccccccceeeechhhhhhhhhcccccccccccccceeecccccccccccccccc-cccceeccccccce
Confidence 99999999999999999999999999999999999999999999999999999999999998764 57899999999999
Q ss_pred eEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCC--cceeE
Q psy7639 2144 FDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSS--STEAS 2221 (2568)
Q Consensus 2144 ~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~--~~~~~ 2221 (2568)
||||++++.+| .++|+++.||.+|||++||.+|++|+.++|+++++.|+..+++++.+|+.+||++|+.||. +.++.
T Consensus 200 ~dvs~~~~~~~-~~~v~~~~~~~~lGG~~~D~~l~~~~~~~~~~~~~~d~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~ 278 (602)
T PF00012_consen 200 FDVSVVEFSNG-QFEVLATAGDNNLGGRDFDEALAEYLLEKFKKKYKIDLRENPRAMARLLEAAEKAKEQLSSNDNTEIT 278 (602)
T ss_dssp EEEEEEEEETT-EEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSS-GTCSHHHHHHHHHHHHHHHHHTTTSSSSEEE
T ss_pred Eeeeehhcccc-cccccccccccccccceecceeeccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999 8999999999999999999999999999999999999999999999999999999999999 78888
Q ss_pred EEEecccC-CcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCCC
Q psy7639 2222 IEIDALYD-GIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLN 2300 (2568)
Q Consensus 2222 ~~i~~~~~-~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~ 2300 (2568)
+.++++++ |.|+.+.|||++||++++++++++.++++++|+++++++.+|+.|+||||+||||+||+.|++.|+ +.+.
T Consensus 279 ~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGG~sr~p~v~~~l~~~f~-~~~~ 357 (602)
T PF00012_consen 279 ISIESLYDDGEDFSITITREEFEELCEPLLERIIEPIEKALKDAGLKKEDIDSVLLVGGSSRIPYVQEALKELFG-KKIS 357 (602)
T ss_dssp EEEEEEETTTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHTT--GGGESEEEEESGGGGSHHHHHHHHHHTT-SEEB
T ss_pred cccccccccccccccccccceecccccccccccccccccccccccccccccceeEEecCcccchhhhhhhhhccc-cccc
Confidence 99999998 899999999999999999999999999999999999999999999999999999999999999996 7888
Q ss_pred CCCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEEecCCeeeEeeecCCCCCccceeeEEeccCCCCcEEE
Q psy7639 2301 LSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTI 2380 (2568)
Q Consensus 2301 ~~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~~~~~~~~~li~r~~~iP~~~~~~f~t~~d~q~~~~i 2380 (2568)
.++|||||||+|||++|+.+++ .++++++.+.|++|+++||+..+|.+.++||+|+++|+..+..|+|..++|+.+.|
T Consensus 358 ~~~~p~~aVA~GAa~~a~~~~~--~~~~~~~~~~d~~~~~~~i~~~~~~~~~ii~~~t~iP~~~~~~~~t~~~~~~~i~i 435 (602)
T PF00012_consen 358 KSVNPDEAVARGAALYAAILSG--SFRVKDIKIIDVTPFSIGIEVSNGKFSKIIPKNTPIPSKKSKSFKTVTDNQTSISI 435 (602)
T ss_dssp -SS-TTTHHHHHHHHHHHHHHT--SCSSTSSCESEBESSEEEEEETTTEEEEEESTTEBSSEEEEEEEEESSTTCSEEEE
T ss_pred cccccccccccccccchhhhcc--ccccccccccccccccccccccccccccccccccccccccccccchhccccccccc
Confidence 9999999999999999999998 57788999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCcccccCCCceeEEEecCCCCCCCCCcceEEEEEeCCCeeEEEEeeeccCCCcceeEEecCCCCCCHHHHHHHHH
Q psy7639 2381 QVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMIN 2460 (2568)
Q Consensus 2381 ~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~t~~~~~i~i~~~~~~ls~eei~~~~~ 2460 (2568)
.+|||++....+|..||+|.|+++++.+.|.++|+|+|++|.||+|+|++.+..++....+++..... +++++++++.+
T Consensus 436 ~i~~g~~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~f~ld~~Gil~V~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~ 514 (602)
T PF00012_consen 436 DIYEGESSSFEDNKKIGSYTISGIPPAPKGKPKIKVTFELDENGILSVEAAEVETGKEEEVTVKKKET-LSKEEIEELKK 514 (602)
T ss_dssp EEEESSSSBGGGSEEEEEEEEES-SSSSTTSSEEEEEEEEETTSEEEEEEEETTTTEEEEEEEESSSS-SCHHHHHHHHH
T ss_pred eeeeccccccccccccccccccccccccccccceeeEEeeeeeeehhhhhcccccccccccccccccc-ccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999888888888644 99999999999
Q ss_pred HHHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHhhcC-CccCHHHHHHHHHHHHH
Q psy7639 2461 DAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKWLDNN-TLADKEEYQDKLQQLQK 2539 (2568)
Q Consensus 2461 ~~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~~~~~~l~~~ek~~i~~~l~e~~~WL~~~-~~a~~ee~~~k~~~L~~ 2539 (2568)
+++++..+|+.++++.+++|++|+++|++|+.+++..+.++++++ .+.+++..+||++. ..++.++|++|+++|++
T Consensus 515 ~~~~~~~~d~~~~~~~e~kn~lE~~i~~~r~~l~~~~~~~~~~~~---~~~l~~~~~wl~~~~~~~~~~e~~~kl~~L~~ 591 (602)
T PF00012_consen 515 KLEEMDEEDEERRERAEAKNELESYIYELRDKLEEDKDFVSEEEK---KKKLKETSDWLEDNGEDADKEEYKEKLEELKK 591 (602)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGSTHHHH---HHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhhhhccccHHHHHHHHHHHHHHHHhhhccCCHHHH---HHHHHHHHHHHHhhccCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999877677888777 78889999999874 45679999999999999
Q ss_pred HHHHHHHHHhc
Q psy7639 2540 SCMPLMSKMHG 2550 (2568)
Q Consensus 2540 ~~~pi~~r~~e 2550 (2568)
...||..|+++
T Consensus 592 ~~~~i~~r~~~ 602 (602)
T PF00012_consen 592 VIEPIKKRYMQ 602 (602)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHhcC
Confidence 99999999874
No 35
>KOG0104|consensus
Probab=100.00 E-value=1.5e-78 Score=745.36 Aligned_cols=564 Identities=32% Similarity=0.513 Sum_probs=492.8
Q ss_pred CCCCCCCCCCCCChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEE-ecCCCceEEEEEcCceeeeCh
Q psy7639 1977 GGAGGASAGDMPRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVV-NDCSKPKIQVEFKGERKTFAP 2055 (2568)
Q Consensus 1977 ~~~~~~~~~~~~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~-~~~~~~~~~v~~~~~~~~~~p 2055 (2568)
.++.-++.+++|++|++|.....|+|++++.++|.|+|++++||.++.+.+++||.-+ .++.+..|.+.+.+ ...|++
T Consensus 57 tp~~vafk~~eR~fg~~A~~ma~r~P~~~~~~l~~llgk~~~~~~v~ly~~~~p~~e~v~d~~rstV~F~i~d-~~~ysv 135 (902)
T KOG0104|consen 57 TPSIVAFKGGERIFGEAAASMATRFPQSTYRQLKDLLGKSLDDPTVDLYQKRFPFFELVEDPQRSTVVFKISD-QEEYSV 135 (902)
T ss_pred CcceEEecCCceehhhhhhhhhhcCcHHHHHHHHHHhCcccCCcHHHHHHhcCCceeecccCccceEEEEeCC-ccccCH
Confidence 3455677889999999999999999999999999999999999999999999988765 33345555555544 578999
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcC---Ccc
Q psy7639 2056 EEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLK---GER 2132 (2568)
Q Consensus 2056 eei~a~iL~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~---~~~ 2132 (2568)
|||.||+|.+.+..||.++..+|+++|||||.|||++||+|+.+||+|||++||+||||.+||||.||+.+... .++
T Consensus 136 EellAMil~~a~~~ae~~a~~~Ikd~ViTVP~~F~qaeR~all~Aa~iagl~vLqLind~~a~Al~ygv~rRk~i~~~~q 215 (902)
T KOG0104|consen 136 EELLAMILQYAKSLAEEYAKQPIKDMVITVPPFFNQAERRALLQAAQIAGLNVLQLINDGTAVALNYGVFRRKEINETPQ 215 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhheEEeCCcccCHHHHHHHHHHHHhcCchhhhhhccchHHHhhhhhhccccCCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997422 679
Q ss_pred eEEEEeeCCeeeEEEEEEEc------CC---cEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhC--CCCCCCHHHHH
Q psy7639 2133 NVLIFDLGGGTFDVSILSID------EG---ALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYK--KDMSVNPRALR 2201 (2568)
Q Consensus 2133 ~vlv~DlGggt~dvsil~~~------~g---~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~--~d~~~~~~~~~ 2201 (2568)
+++|||||+|++.++|+.|. .| ..++|+++++|.+|||..|.++|.+||++.|.++++ .|++.|||||+
T Consensus 216 ~~i~YDMGs~sT~Ativsy~~v~~k~~g~~~p~i~~~gvGfd~tLGG~e~~~rLr~~l~~~F~~~~k~~~dv~~nprAma 295 (902)
T KOG0104|consen 216 HYIFYDMGSGSTSATIVSYQLVKTKEQGGKQPQIQVLGVGFDRTLGGLEMTMRLRDHLANEFNEQHKTKKDVHTNPRAMA 295 (902)
T ss_pred EEEEEecCCCceeEEEEEEEeeccccccCccceEEEEeeccCCccchHHHHHHHHHHHHHHHHHhcCCccccccCHHHHH
Confidence 99999999999999999983 22 478999999999999999999999999999999887 47899999999
Q ss_pred HHHHHHHHHhhccCCcceeEEEEecccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCcc
Q psy7639 2202 RLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGST 2281 (2568)
Q Consensus 2202 ~L~~~~e~~K~~LS~~~~~~~~i~~~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGst 2281 (2568)
||.++|+|+|.+||+|.++.++|++|++|+||+.+|||++||+||+|++.|+..||++||+.|+++.++|+.|||+||+|
T Consensus 296 Kl~keA~R~K~vLSANsea~aqIEsL~ddiDFr~kvTRe~fEelc~Dl~~r~~~Pi~dAl~~a~l~ldeIn~ViL~Gg~T 375 (902)
T KOG0104|consen 296 KLNKEAERLKQVLSANSEAFAQIESLIDDIDFRLKVTREEFEELCADLEERIVEPINDALKKAQLSLDEINQVILFGGAT 375 (902)
T ss_pred HHHHHHHHHHHHhhcchhhHHHHHHHhhccccccceeHHHHHHHHHHHHHhhhhhHHHHHHhcCCChhhhheeEEecCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhcCCCCCCCCCCcchhHHhhHHHHHHHhhCCCCccccceEEeeeccCceeEE--ecCC------eeeEe
Q psy7639 2282 RIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIE--TAGG------VMTKL 2353 (2568)
Q Consensus 2282 riP~v~~~l~~~f~~~~~~~~~npdeava~GAa~~aa~ls~~~~~~~~~~~~~d~~p~~~gi~--~~~~------~~~~l 2353 (2568)
|||+||+.|.++.+.+++.+++|.|||+|+||+||||.||. +|+++.+.+.|..+|++-++ +..| ....+
T Consensus 376 RVP~VQe~l~k~v~~~ei~knlNaDEA~vmGav~~aA~LSk--sFKvKpf~V~D~~~yp~~v~f~~~~~i~~~k~~~~~l 453 (902)
T KOG0104|consen 376 RVPKVQETLIKAVGKEELGKNLNADEAAVMGAVYQAAHLSK--SFKVKPFNVVDASVYPYLVEFETEPGIHALKSVKRDL 453 (902)
T ss_pred cCchHHHHHHHHHhHHHHhcccChhHHHHHHHHHHHHhhcc--cccccceeeeecccccEEEEeccCCcccccchhHHHH
Confidence 99999999999999899999999999999999999999997 89999999999887776654 3323 22348
Q ss_pred eecCCCCCccceeeEEeccCCCCcEEEEEeecCcccccCCCceeEEEecCCCCCCCC-------CcceEEEEEeCCCeeE
Q psy7639 2354 IERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRG-------VPKIDVTFDLDANGIL 2426 (2568)
Q Consensus 2354 i~r~~~iP~~~~~~f~t~~d~q~~~~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g-------~~~i~v~f~id~~Gil 2426 (2568)
|+||.++|.++..+|+.+.|+. .+.+-.|.- ...+-.|+|+|+..+... ...|+++|.+|.+|++
T Consensus 454 f~~~~~yPnk~vi~~~~ysddf---~~~~n~~~~-----~~nl~~velsgV~d~~kk~~~~~~~~KGIk~~F~~D~Sgi~ 525 (902)
T KOG0104|consen 454 FARMSPYPNKKVITFTSYSDDF---PFNINYGDL-----GQNLTTVELSGVKDALKKNSYSDSESKGIKASFSLDLSGIV 525 (902)
T ss_pred HhcCCcCCCcceeeccccCCcc---ccccchhhh-----ccCccEEEEecchHHHHhcccchhhccCceEEEEEcCcCce
Confidence 9999999999999999887743 333322211 034568999988776432 2459999999999999
Q ss_pred EEEeeec---------------------cC------C----------------Cc--c----------------------
Q psy7639 2427 NVTAKDT---------------------SS------G----------------KS--Q---------------------- 2439 (2568)
Q Consensus 2427 ~v~a~~~---------------------~t------~----------------~~--~---------------------- 2439 (2568)
.|+..+. +| + .+ .
T Consensus 526 ~v~~~evv~e~~~~~d~~~~~st~~K~~~~~e~e~~~~~~~~~e~ae~k~~ep~e~se~~ee~~~d~s~e~k~e~~t~e~ 605 (902)
T KOG0104|consen 526 LVSRVEVVFEKQKEEDSGDKKSTLSKLGSTSEGEETSDDSVQEEDAEEKGLEPSERSELEEEAEEDASQEDKTEKETSEA 605 (902)
T ss_pred EEeeeeEEEeccCCcccchhhhhhhccccccccccccccccchhhhhhhccCccccccccccccccccccccccccchhc
Confidence 9987520 00 0 00 0
Q ss_pred ---------------eeEEecC---CCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhHHHHHHHHHHHhhhcc--CC
Q psy7639 2440 ---------------NITIKND---KGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAG--NK 2499 (2568)
Q Consensus 2440 ---------------~i~i~~~---~~~ls~eei~~~~~~~~~~~~~D~~~re~~eakN~lE~~iy~~r~~L~~~~--~~ 2499 (2568)
.+.|+.. .+.|+...++....+++.+...|+.+.++++|-|.||.|+|.+.++|++.. .+
T Consensus 606 ~~~~~~~~~~~p~~~~~~i~~~~~~~~~l~~~~~~~~~~kl~d~~~~e~~k~~re~a~N~LE~~l~e~q~~l~d~ey~e~ 685 (902)
T KOG0104|consen 606 QKPTEKKETPAPMVVRLQIQETYPDLPVLNENALDAAVAKLEDFVQKEKEKSEREEASNELEAFLFELQDKLDDDEYAEV 685 (902)
T ss_pred cCcchhhcccCcceeEeeeeeecccccCCchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCchHhhh
Confidence 0223222 246999999999999999999999999999999999999999999998743 78
Q ss_pred CCHHHHHHHHHHHHHHHHHhhc-CCccCHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy7639 2500 LTESEKSRCREECDATLKWLDN-NTLADKEEYQDKLQQLQKSCMPLMSKMHGG 2551 (2568)
Q Consensus 2500 l~~~ek~~i~~~l~e~~~WL~~-~~~a~~ee~~~k~~~L~~~~~pi~~r~~e~ 2551 (2568)
.++++++.|++.+....+||++ .....+++|++++.+|++++..+..|.+++
T Consensus 686 at~EEk~~L~~~~~~~~~Wleed~~~~~t~~~~ek~a~L~~l~~~~~~R~ee~ 738 (902)
T KOG0104|consen 686 ATEEEKKILKKKVSLLMDWLEEDGSQTPTEMLTEKLAELKKLETSKNFREEER 738 (902)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHhhhhHHHHHH
Confidence 8999999999999999999986 445788999999999999999999998764
No 36
>KOG0103|consensus
Probab=100.00 E-value=3.9e-78 Score=745.16 Aligned_cols=591 Identities=36% Similarity=0.571 Sum_probs=528.0
Q ss_pred CcccccccCc--ccccchhhhccCCCCceeeeccccccccccc-----CCCceeecHHHHHhHhhCCCchHHhhhhhcCC
Q psy7639 1 MKESYIAEGP--CAISPAQRRVMRDPGRVVERAALELRVKSLT-----NPLSYFTGDAAKNQVAMNPKNTVFDAKRLIGR 73 (2568)
Q Consensus 1 ~~~~~~~~g~--~~~~~a~~~~~~~~~~~~e~~~~~~~v~~~~-----~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~ 73 (2568)
|+.+|||||- ||+++|.. +-+|.++|+.+-+..+ +...|++|.+|+++..+|+.||+.++|||+||
T Consensus 1 msvvG~D~Gn~nc~iavAr~-------~gIe~i~nd~Snr~TPa~vsfg~K~R~~G~aak~~~~~n~kntv~~~KRl~Gr 73 (727)
T KOG0103|consen 1 MSVVGFDLGNENCYIAVARQ-------GGIEVVANDYSNRETPAIVSFGPKNRFIGVAAKNQQTTNVKNTVSNFKRLIGR 73 (727)
T ss_pred CCceeeeccccceeeeeecc-------CCceeeeeccccccCcceeeeccccceeeeccccceeecccccchhhhhhhcc
Confidence 8999999996 56665542 3356666655444432 24689999999999999999999999999999
Q ss_pred CCCChhHHhhcccCCeEEEe-cCCCCcEEEEEcCcceeecHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCHHHH
Q psy7639 74 KFDDPKIQQDMKHWPFTVVN-DCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQR 152 (2568)
Q Consensus 74 ~~~d~~v~~~~~~~p~~~~~-~~~~~~~~v~~~~~~~~~speel~a~~L~~l~~~ae~~l~~~~~~~VITVPa~f~~~qr 152 (2568)
+|+||.+|.+.+.+||.++. .++..++.++|.|+.+.|+|+||+||+|.+|++.|++.+..++.+|||+||+||++.||
T Consensus 74 ~f~dP~~q~~~~~~~~~vv~~~dg~vgi~v~ylge~~~ft~~Qv~Am~l~klk~~ae~~l~~~v~DcvIavP~~FTd~qR 153 (727)
T KOG0103|consen 74 KFSDPEVQREIKSLPRSVVQLKDGDVGIKVEYLGEKHPFTPEQVLAMLLTKLKATAEKNLKSPVSDCVIAVPSYFTDSQR 153 (727)
T ss_pred ccCChHhhhcccccchheeecCCCCcceeehcccCCCCCChHHHHHHHHHHHHHHHHHhcCCCCCCeeEeccccccHHHH
Confidence 99999999999999999998 57889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCcEEEEecchhHHHHhhccccc-c----CCCceEEEEEeCCcceEEEEeeecCCcEEEEEeeccccccc
Q psy7639 153 QATKDAGAIAGLNVMRIVNEPTAAALAYGLDKN-L----KGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLG 227 (2568)
Q Consensus 153 ~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~-~----~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lG 227 (2568)
+++.+||++|||++++|++|.+|+|++||+.++ + .++.+|+++|+|++++.+|++.|..| .+.++++.+|.++|
T Consensus 154 ravldAA~iagLn~lrLmnd~TA~Al~ygiyKtDLP~~~ekpr~v~fvD~GHS~~q~si~aF~kG-~lkvl~ta~D~~lG 232 (727)
T KOG0103|consen 154 RAVLDAARIAGLNPLRLMNDTTATALAYGIYKTDLPENEEKPRNVVFVDIGHSSYQVSIAAFTKG-KLKVLATAFDRKLG 232 (727)
T ss_pred HHHHhHHhhcCccceeeeecchHhHhhcccccccCCCcccCcceEEEEecccccceeeeeeeccC-cceeeeeecccccc
Confidence 999999999999999999999999999999876 2 23678999999999999999999999 57999999999999
Q ss_pred ccchHHHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeccCcceEEeecHHHHHHHHhhh
Q psy7639 228 GEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDL 307 (2568)
Q Consensus 228 G~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~~~~i~i~~l~~~~d~~~~itR~efe~l~~~l 307 (2568)
|++||+.|.+|+.++|+.+|++++..++++..||+.+||+.|+.||+++..+.+|+|++++.|.+..|+|+|||++|.|+
T Consensus 233 gr~fDe~L~~hfa~efk~kykidv~sn~kA~lRL~~~~EKlKK~lSAN~~~plNIEcfM~d~dvs~~i~ReEfEel~~pl 312 (727)
T KOG0103|consen 233 GRDFDEALIDHFAKEFKTKYKIDVRSNAKAKLRLLAECEKLKKVLSANTELPLNIECFMNDKDVSSKIKREEFEELSAPL 312 (727)
T ss_pred cchHHHHHHHHHHHHhccccccchhhchhHHHHHHHHHHHHHHHhhcCcCCCcchhheeecchhhhhccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHcCCCCcccc
Q psy7639 308 FRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQ 387 (2568)
Q Consensus 308 ~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls~~~~~~~~ 387 (2568)
++|+..++.++|++++++.+||+.|++|||+||+|.|.+.|.++| ++++.+++|.|+|||+|||+++|++|+.+ +++
T Consensus 313 L~rv~~p~~~~l~d~~l~~edi~~VEiVGg~sripaike~Is~~F-gke~s~TlN~dEavarG~ALqcAIlSP~f--rVR 389 (727)
T KOG0103|consen 313 LERVEVPLLKALADAKLKVEDIHAVEIVGGLSRIPAIKEMISDFF-GKELSRTLNQDEAVARGAALQCAILSPTF--RVR 389 (727)
T ss_pred HHhhhHHHHHHHHHhcCccccceeEEEecCcccchHHHHHHHHHh-CCcccccccHHHHHHHhHHHHHHhcCccc--cce
Confidence 999999999999999999999999999999999999999999999 89999999999999999999999999885 789
Q ss_pred cEEEEeeecccceeEee----C-CceeEEEEcCCccCccceEEEEeeecCCccEEEEEEecC-cccccCCcceeEEEecC
Q psy7639 388 DVLLVDVTPLSLGIETA----G-GVMSKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGE-RAMTKDNNLLGTFDLTG 461 (2568)
Q Consensus 388 ~~~~~dv~p~sigi~~~----~-~~~~~ii~k~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~-~~~~~~~~~ig~~~i~~ 461 (2568)
++.+.|+.||++.+.+. + +....+|++|.++|..+..||.... .|.+.++++. ..++.....|++|++.+
T Consensus 390 ef~v~Di~pysIs~~w~~~~ed~~~~~evF~~~~~~p~~K~lT~~Rk~----~F~lea~yt~~~~lp~~~~kI~~~~i~~ 465 (727)
T KOG0103|consen 390 EFSVEDIVPYSISLRWVKQGEDGGSVTEVFPKGHPSPSVKLLTFNRKG----PFTLEAKYTKVNKLPYPKPKIEKWTITG 465 (727)
T ss_pred ecceecccceeEEEEeccccccCCCceeeecCCCCCCCceEEEEEecC----ceEEEEEeccccccCCCCCceeeEEecc
Confidence 99999999999998754 2 3457899999999999888885533 5788888776 44555678899999999
Q ss_pred CCCCCC-CCCeEEEEEEecCCccEEEEEeecCC----------------------------Cc----eeeEEEecC-CCC
Q psy7639 462 IPPAPR-GVPKIDVTFDLDANGILNVTAKDTSS----------------------------GK----SQNITIKND-KGR 507 (2568)
Q Consensus 462 ~~~~~~-g~~~i~v~f~~d~~G~l~v~~~~~~~----------------------------~~----~~~~~i~~~-~~~ 507 (2568)
+.+... +..+++|+++++.+|++.|....... ++ ...+++... .+.
T Consensus 466 v~~~~~ge~skVKvkvr~n~~Gi~~i~sA~~~e~~~veev~~~~~e~~~~~~~~~~~~~~~~k~kvk~~~L~~~~~~~~~ 545 (727)
T KOG0103|consen 466 VTPSEDGEFSKVKVKVRLNEHGIDTIESATLIEDIEVEEVPEEPMEYDDAAKMLERIAPAENKKKVKKVDLPIEAYTKGA 545 (727)
T ss_pred cccCccccccceeEEEEEcCccceeeecceeecccchhccccchhhhhcchhhhhhhccccccceeeeccccceeeeccc
Confidence 888766 46789999999999999987532110 10 011222222 246
Q ss_pred CCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHh-hcCCCCCH
Q psy7639 508 LSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNA-GNKLTESEKSRCREECDATLKWL-DNNTLADK 585 (2568)
Q Consensus 508 ls~~e~~~~~~~~~~~~~~d~~~~~~~~~~N~LE~~iy~~~~~l~~~-~~~~~~~e~~~~~~~l~~~~~Wl-~~~~~a~~ 585 (2568)
|+..+++...+++.+|...|+...++.+++|.||+|||+||++|++. .++.+++++++|...|+++++|| ++|+|.++
T Consensus 546 l~~~~l~~~~e~E~~M~~qD~~~~Et~D~KNaleeyVY~~R~kl~~~y~~f~~~a~~e~~~~~l~~~E~wlyedGed~~k 625 (727)
T KOG0103|consen 546 LITDELELYIEKENKMILQDKLEKETVDAKNALEEYVYDMRDKLSDKYEDFITDAEREKLKKMLTDTEEWLYEDGEDQTK 625 (727)
T ss_pred cCHHHHHHHHHHHHHhhhhhhhhhhhccHHHHHHHHHHHHHHHhhhhhhhhcCHHHHHHHHHHHHHHHHHHHhcCcccch
Confidence 99999999999999999999999999999999999999999999875 57799999999999999999999 57999999
Q ss_pred HHHHHHHHHHHhhcccccccccC
Q psy7639 586 EEYQDKLQQLQKSCMPLMSKMHG 608 (2568)
Q Consensus 586 ~~~~~kl~~L~~~~~~i~~r~~e 608 (2568)
..|..||.+|+++++ ..|..+
T Consensus 626 ~~Y~~kl~elk~~g~--~~r~~e 646 (727)
T KOG0103|consen 626 AVYVAKLEELKKLGD--KKRFDE 646 (727)
T ss_pred HHHHHHHHHHHhhhh--hhhhhh
Confidence 999999999999998 444443
No 37
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B ....
Probab=100.00 E-value=2.8e-77 Score=818.90 Aligned_cols=588 Identities=48% Similarity=0.808 Sum_probs=534.0
Q ss_pred HhcccccEEEEEEcccccc--cccCCcccccccccchh---hhhHHHHhhhcCCCccccccccccccccCChhhhhcccc
Q psy7639 1381 RISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRCRE---ECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKH 1455 (2568)
Q Consensus 1381 ~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~~~---~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~~k~ 1455 (2568)
.|||+||++|++.++.+.+ |..|+|.|||+|+|.+. +|..|+.+...+|.++++++|||||+.++++.++...+.
T Consensus 5 D~Gt~~~~va~~~~~~~~ii~~~~~~~~~ps~v~~~~~~~~~G~~a~~~~~~~~~~~~~~~k~liG~~~~~~~~~~~~~~ 84 (602)
T PF00012_consen 5 DLGTTNSKVAVFKNGKPEIILNEEGKRKTPSVVSFSDNERLVGEDAKSQMIRNPKNTIYNLKRLIGRKFDDPDVQKEKKK 84 (602)
T ss_dssp EE-SSEEEEEEEETTEEEEE--TTS-SSEESEEEEESSCEEETHHHHHTTTTSGGGEEESGGGTTTSBTTSHHHHHHHTT
T ss_pred EeccCCEEEEEEEeccccccccccccccccceeeEeeecccCCcchhhhcccccccccccccccccccccccccchhhhc
Confidence 5899999999999988887 99999999999999554 699999999999999999999999999999999999999
Q ss_pred cccEEeeC-CCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCc
Q psy7639 1456 WPFTVVND-CSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLN 1534 (2568)
Q Consensus 1456 ~~~~~~~~-~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~ 1534 (2568)
+||.++.. .+++.+.+.+.+..+.|+|+++++++|++|++.++.++|..+.++||||||+|++.||++|++||++|||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~~~~Aa~~agl~ 164 (602)
T PF00012_consen 85 FPYKVVEDPDGKVYFEVDYDGKSKTYSPEELSAMILKYLKEMAEKYLGEKVTDVVITVPAYFTDEQRQALRDAAELAGLN 164 (602)
T ss_dssp SSSEEEEETTTEEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHTSBEEEEEEEE-TT--HHHHHHHHHHHHHTT-E
T ss_pred ccccccccccccccccccccccceeeeeecccccchhhhcccchhhcccccccceeeechhhhhhhhhcccccccccccc
Confidence 99999876 55567777776666799999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHh
Q psy7639 1535 VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKR 1614 (2568)
Q Consensus 1535 v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~ 1614 (2568)
+++||+||+|||++|+..... .++++|||||||||||+|++++.+| .++++++.|+..+||.+||++|++|+.++|..
T Consensus 165 ~~~li~Ep~Aaa~~y~~~~~~-~~~~vlv~D~Gggt~dvs~~~~~~~-~~~v~~~~~~~~lGG~~~D~~l~~~~~~~~~~ 242 (602)
T PF00012_consen 165 VLRLINEPTAAALAYGLERSD-KGKTVLVVDFGGGTFDVSVVEFSNG-QFEVLATAGDNNLGGRDFDEALAEYLLEKFKK 242 (602)
T ss_dssp EEEEEEHHHHHHHHTTTTSSS-SEEEEEEEEEESSEEEEEEEEEETT-EEEEEEEEEETTCSHHHHHHHHHHHHHHHHHH
T ss_pred cceeecccccccccccccccc-cccceeccccccceEeeeehhcccc-cccccccccccccccceecceeeccccccccc
Confidence 999999999999999887654 6789999999999999999999877 88999999999999999999999999999999
Q ss_pred hhcCCCCCCHHHHHHHHHHHHHhhcccCC--CCeeEEEEccccC-CcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHHc
Q psy7639 1615 KYKKDMSVNPRALRRLRTAAERAKRTLSS--STEASIEIDALYD-GIDFYTKISRARFEELCSDLFRSTLQPVEKALQDA 1691 (2568)
Q Consensus 1615 ~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~--~~~~~i~i~~~~~-~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~a 1691 (2568)
+++.+...+++.+.+|+.+||++|+.||. ..+..+.++.+.+ +.++.+.|||++|+++++|+++++..+|+++|+++
T Consensus 243 ~~~~d~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~~ 322 (602)
T PF00012_consen 243 KYKIDLRENPRAMARLLEAAEKAKEQLSSNDNTEITISIESLYDDGEDFSITITREEFEELCEPLLERIIEPIEKALKDA 322 (602)
T ss_dssp HHSS-GTCSHHHHHHHHHHHHHHHHHTTTSSSSEEEEEEEEEETTTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccccccccccccccccccc
Confidence 99999888999999999999999999999 5666667766666 78899999999999999999999999999999999
Q ss_pred CCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCCCccccceEEEeeccccccee
Q psy7639 1692 KLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQSSAIQDVLLVDVTPLSLGIE 1771 (2568)
Q Consensus 1692 ~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~~~~~~~~~l~dv~p~slGie 1771 (2568)
++...+|+.|+||||+||+|+||+.|++.|+ +.+...+||++|||+|||++|+.+++.. ..+++.+.|++|++|||+
T Consensus 323 ~~~~~~i~~V~lvGG~sr~p~v~~~l~~~f~-~~~~~~~~p~~aVA~GAa~~a~~~~~~~--~~~~~~~~d~~~~~~~i~ 399 (602)
T PF00012_consen 323 GLKKEDIDSVLLVGGSSRIPYVQEALKELFG-KKISKSVNPDEAVARGAALYAAILSGSF--RVKDIKIIDVTPFSIGIE 399 (602)
T ss_dssp T--GGGESEEEEESGGGGSHHHHHHHHHHTT-SEEB-SS-TTTHHHHHHHHHHHHHHTSC--SSTSSCESEBESSEEEEE
T ss_pred cccccccceeEEecCcccchhhhhhhhhccc-cccccccccccccccccccchhhhcccc--cccccccccccccccccc
Confidence 9999999999999999999999999999996 7788899999999999999999998743 346788999999999999
Q ss_pred ecCcEEEEEEecCCccccccEEEEEeecCCCceEEEEEEecccccccCCceeeeeEecCCCCCCCCCceEEEEEEEcCCe
Q psy7639 1772 TAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANG 1851 (2568)
Q Consensus 1772 ~~~g~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~vyeGe~~~~~~n~~lg~~~l~~ipp~~~g~~~i~v~f~id~nG 1851 (2568)
..+|.+.+++++|+++|+..+..|++..++|+.+.|.||+|++....+|..||++.+.++++.|+|.++|+|+|++|.||
T Consensus 400 ~~~~~~~~ii~~~t~iP~~~~~~~~t~~~~~~~i~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~f~ld~~G 479 (602)
T PF00012_consen 400 VSNGKFSKIIPKNTPIPSKKSKSFKTVTDNQTSISIDIYEGESSSFEDNKKIGSYTISGIPPAPKGKPKIKVTFELDENG 479 (602)
T ss_dssp ETTTEEEEEESTTEBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEES-SSSSTTSSEEEEEEEEETTS
T ss_pred ccccccccccccccccccccccccchhccccccccceeeeccccccccccccccccccccccccccccceeeEEeeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcCCCceeeEEEecCCCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCHHH
Q psy7639 1852 ILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESE 1931 (2568)
Q Consensus 1852 iL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~rn~le~~~~~~~~~l~~~~~~~~~~~ 1931 (2568)
+|+|++.+..++.+..+++..... +++++++++.++++++..+|+.++++.+++|++|+++|+++..|++..+.+++++
T Consensus 480 il~V~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~e~kn~lE~~i~~~r~~l~~~~~~~~~~~ 558 (602)
T PF00012_consen 480 ILSVEAAEVETGKEEEVTVKKKET-LSKEEIEELKKKLEEMDEEDEERRERAEAKNELESYIYELRDKLEEDKDFVSEEE 558 (602)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSS-SCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGSTHHH
T ss_pred ehhhhhcccccccccccccccccc-cccccccccccccchhhhhhhhhhhccccHHHHHHHHHHHHHHHHhhhccCCHHH
Confidence 999999999999999999988655 9999999999999999999999999999999999999999999987777777777
Q ss_pred HHHHHHHHHHHHHHhhcC-CccCHHHHHHHHHHHHHhhhcccccccC
Q psy7639 1932 KSRCREECDATLKWLDNN-TLADKEEYQDKLQQLQKSCMPLMSKMHG 1977 (2568)
Q Consensus 1932 ~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~y~ 1977 (2568)
+ .+.+++..+||+++ ..++.++|++|+++|++...||..++|+
T Consensus 559 ~---~~~l~~~~~wl~~~~~~~~~~e~~~kl~~L~~~~~~i~~r~~~ 602 (602)
T PF00012_consen 559 K---KKKLKETSDWLEDNGEDADKEEYKEKLEELKKVIEPIKKRYMQ 602 (602)
T ss_dssp H---HHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred H---HHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6 67788888999654 4667999999999999999999988874
No 38
>KOG0104|consensus
Probab=100.00 E-value=4.2e-72 Score=688.52 Aligned_cols=591 Identities=31% Similarity=0.487 Sum_probs=516.2
Q ss_pred cccccccCcccccchhhh-------ccCCCCceeeecccccccccccCCCceeecHHHHHhHhhCCCchHHhhhhhcCCC
Q psy7639 2 KESYIAEGPCAISPAQRR-------VMRDPGRVVERAALELRVKSLTNPLSYFTGDAAKNQVAMNPKNTVFDAKRLIGRK 74 (2568)
Q Consensus 2 ~~~~~~~g~~~~~~a~~~-------~~~~~~~~~e~~~~~~~v~~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~ 74 (2568)
+.++||+|+..+++|++. |+++.+||+++..+.+. +++|++|++|.+++.++|++++.+++.|||++
T Consensus 23 AvmsVDlGse~~Kv~vVkPGvPmeIvLn~esrRKtp~~vafk------~~eR~fg~~A~~ma~r~P~~~~~~l~~llgk~ 96 (902)
T KOG0104|consen 23 AVMSVDLGSEWIKVAVVKPGVPMEIVLNKESRRKTPSIVAFK------GGERIFGEAAASMATRFPQSTYRQLKDLLGKS 96 (902)
T ss_pred hheeeecccceeEEEEecCCCCeEEeechhhcccCcceEEec------CCceehhhhhhhhhhcCcHHHHHHHHHHhCcc
Confidence 568999999999999976 77777888777655554 58999999999999999999999999999999
Q ss_pred CCChhHHhhcccCCeEEEecC-CCCcEEEEEcCcceeecHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCHHHHH
Q psy7639 75 FDDPKIQQDMKHWPFTVVNDC-SKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQ 153 (2568)
Q Consensus 75 ~~d~~v~~~~~~~p~~~~~~~-~~~~~~v~~~~~~~~~speel~a~~L~~l~~~ae~~l~~~~~~~VITVPa~f~~~qr~ 153 (2568)
.+||.++.+.++|||.-+..+ .+..+.+.+.+ ...|++|+|+||+|.+.+..|+.+...++.++|||||.||++.||+
T Consensus 97 ~~~~~v~ly~~~~p~~e~v~d~~rstV~F~i~d-~~~ysvEellAMil~~a~~~ae~~a~~~Ikd~ViTVP~~F~qaeR~ 175 (902)
T KOG0104|consen 97 LDDPTVDLYQKRFPFFELVEDPQRSTVVFKISD-QEEYSVEELLAMILQYAKSLAEEYAKQPIKDMVITVPPFFNQAERR 175 (902)
T ss_pred cCCcHHHHHHhcCCceeecccCccceEEEEeCC-ccccCHHHHHHHHHHHHHHHHHHHHhcchhheEEeCCcccCHHHHH
Confidence 999999999999998766644 68888888877 4789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEEEEecchhHHHHhhccccc---cCCCceEEEEEeCCcceEEEEeeecC------C---cEEEEEeec
Q psy7639 154 ATKDAGAIAGLNVMRIVNEPTAAALAYGLDKN---LKGERNVLIFDLGGGTFDVSILSIDE------G---ALFEVRSTA 221 (2568)
Q Consensus 154 al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~---~~~~~~vlV~D~GggT~Dvsv~~~~~------~---~~~~v~~~~ 221 (2568)
++.+||++||++++.||||.+||||.|++.+. ...++++||||||+|+|.++++.+.- | ..+++++++
T Consensus 176 all~Aa~iagl~vLqLind~~a~Al~ygv~rRk~i~~~~q~~i~YDMGs~sT~Ativsy~~v~~k~~g~~~p~i~~~gvG 255 (902)
T KOG0104|consen 176 ALLQAAQIAGLNVLQLINDGTAVALNYGVFRRKEINETPQHYIFYDMGSGSTSATIVSYQLVKTKEQGGKQPQIQVLGVG 255 (902)
T ss_pred HHHHHHHhcCchhhhhhccchHHHhhhhhhccccCCCCceEEEEEecCCCceeEEEEEEEeeccccccCccceEEEEeec
Confidence 99999999999999999999999999999864 35678999999999999999999831 2 468999999
Q ss_pred ccccccccchHHHHHHHHHHHHHhhhcc--cCCCCHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeccCcceEEeecHHH
Q psy7639 222 GDTHLGGEDFDNRLVSHLAEEFKRKYKK--DMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRAR 299 (2568)
Q Consensus 222 gd~~lGG~~~D~~l~~~l~~~~~~~~~~--~~~~~~~~~~~L~~~aE~aK~~LS~~~~~~i~i~~l~~~~d~~~~itR~e 299 (2568)
+|.+|||..|..+|.+||.+.|.++++. +++.+||+|++|.++|+++|..||+|.++.+.|++++++.||+.+|||++
T Consensus 256 fd~tLGG~e~~~rLr~~l~~~F~~~~k~~~dv~~nprAmaKl~keA~R~K~vLSANsea~aqIEsL~ddiDFr~kvTRe~ 335 (902)
T KOG0104|consen 256 FDRTLGGLEMTMRLRDHLANEFNEQHKTKKDVHTNPRAMAKLNKEAERLKQVLSANSEAFAQIESLIDDIDFRLKVTREE 335 (902)
T ss_pred cCCccchHHHHHHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHhhccccccceeHHH
Confidence 9999999999999999999999998874 67889999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhHHHHHHHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHc
Q psy7639 300 FEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 379 (2568)
Q Consensus 300 fe~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls 379 (2568)
||++|.++..|+..||+++|..++++..+|+.|+|+||+||+|.||+.|.++.+..++..++|+|||+++||+++||.||
T Consensus 336 fEelc~Dl~~r~~~Pi~dAl~~a~l~ldeIn~ViL~Gg~TRVP~VQe~l~k~v~~~ei~knlNaDEA~vmGav~~aA~LS 415 (902)
T KOG0104|consen 336 FEELCADLEERIVEPINDALKKAQLSLDEINQVILFGGATRVPKVQETLIKAVGKEELGKNLNADEAAVMGAVYQAAHLS 415 (902)
T ss_pred HHHHHHHHHHhhhhhHHHHHHhcCCChhhhheeEEecCcccCchHHHHHHHHHhHHHHhcccChhHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred CCCCcccccEEEEeeecccceeEeeCC--------ceeEEEEcCCccCccceEEEEeeecCCccEEEEEEecCcccccCC
Q psy7639 380 GDQSSAIQDVLLVDVTPLSLGIETAGG--------VMSKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDN 451 (2568)
Q Consensus 380 ~~~~~~~~~~~~~dv~p~sigi~~~~~--------~~~~ii~k~~~iP~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~ 451 (2568)
..| +++++.+.|.++|+|-++.... ....+|++|.++|.++..+|+.+.|+ |.+.+-.|.- .
T Consensus 416 ksF--KvKpf~V~D~~~yp~~v~f~~~~~i~~~k~~~~~lf~~~~~yPnk~vi~~~~ysdd---f~~~~n~~~~-----~ 485 (902)
T KOG0104|consen 416 KSF--KVKPFNVVDASVYPYLVEFETEPGIHALKSVKRDLFARMSPYPNKKVITFTSYSDD---FPFNINYGDL-----G 485 (902)
T ss_pred ccc--cccceeeeecccccEEEEeccCCcccccchhHHHHHhcCCcCCCcceeeccccCCc---cccccchhhh-----c
Confidence 875 7888999999999998865432 23457999999999988888776654 4443332221 1
Q ss_pred cceeEEEecCCCCCC----C---CCCeEEEEEEecCCccEEEEEeecC---------------------C----------
Q psy7639 452 NLLGTFDLTGIPPAP----R---GVPKIDVTFDLDANGILNVTAKDTS---------------------S---------- 493 (2568)
Q Consensus 452 ~~ig~~~i~~~~~~~----~---g~~~i~v~f~~d~~G~l~v~~~~~~---------------------~---------- 493 (2568)
..+.+++++|+..+- . ....|+++|.+|.+|++.|.-.+.. +
T Consensus 486 ~nl~~velsgV~d~~kk~~~~~~~~KGIk~~F~~D~Sgi~~v~~~evv~e~~~~~d~~~~~st~~K~~~~~e~e~~~~~~ 565 (902)
T KOG0104|consen 486 QNLTTVELSGVKDALKKNSYSDSESKGIKASFSLDLSGIVLVSRVEVVFEKQKEEDSGDKKSTLSKLGSTSEGEETSDDS 565 (902)
T ss_pred cCccEEEEecchHHHHhcccchhhccCceEEEEEcCcCceEEeeeeEEEeccCCcccchhhhhhhccccccccccccccc
Confidence 344588888877432 1 2467999999999999987532110 0
Q ss_pred -------------Cc-ee-------------------------------------eEEEe---cCCCCCCHHHHHHHHHH
Q psy7639 494 -------------GK-SQ-------------------------------------NITIK---NDKGRLSKEEIDRMIND 519 (2568)
Q Consensus 494 -------------~~-~~-------------------------------------~~~i~---~~~~~ls~~e~~~~~~~ 519 (2568)
++ .. .+.+. .+.+.|++..++....+
T Consensus 566 ~~~e~ae~k~~ep~e~se~~ee~~~d~s~e~k~e~~t~e~~~~~~~~~~~~p~~~~~~i~~~~~~~~~l~~~~~~~~~~k 645 (902)
T KOG0104|consen 566 VQEEDAEEKGLEPSERSELEEEAEEDASQEDKTEKETSEAQKPTEKKETPAPMVVRLQIQETYPDLPVLNENALDAAVAK 645 (902)
T ss_pred cchhhhhhhccCccccccccccccccccccccccccchhccCcchhhcccCcceeEeeeeeecccccCCchhHHHHHHHH
Confidence 00 00 01222 12345899999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHh-hcCCCCCHHHHHHHHHHHH
Q psy7639 520 AERYKDEDERQKERISARNNLEAYVFNVKQALDNA--GNKLTESEKSRCREECDATLKWL-DNNTLADKEEYQDKLQQLQ 596 (2568)
Q Consensus 520 ~~~~~~~d~~~~~~~~~~N~LE~~iy~~~~~l~~~--~~~~~~~e~~~~~~~l~~~~~Wl-~~~~~a~~~~~~~kl~~L~ 596 (2568)
+..+...|+.+.+++++.|+||+|+|+++++|++. ..+.+++|+..|++.+..+.+|| +++.++++++|.+++.+|+
T Consensus 646 l~d~~~~e~~k~~re~a~N~LE~~l~e~q~~l~d~ey~e~at~EEk~~L~~~~~~~~~Wleed~~~~~t~~~~ek~a~L~ 725 (902)
T KOG0104|consen 646 LEDFVQKEKEKSEREEASNELEAFLFELQDKLDDDEYAEVATEEEKKILKKKVSLLMDWLEEDGSQTPTEMLTEKLAELK 725 (902)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCchHhhhcCHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHH
Confidence 99999999999999999999999999999999864 48899999999999999999999 5688899999999999999
Q ss_pred hhcccccccccCC
Q psy7639 597 KSCMPLMSKMHGG 609 (2568)
Q Consensus 597 ~~~~~i~~r~~e~ 609 (2568)
+++..+..|.++.
T Consensus 726 ~l~~~~~~R~ee~ 738 (902)
T KOG0104|consen 726 KLETSKNFREEER 738 (902)
T ss_pred HHHhhhhHHHHHH
Confidence 9999999998763
No 39
>PRK11678 putative chaperone; Provisional
Probab=100.00 E-value=9.8e-47 Score=484.49 Aligned_cols=297 Identities=28% Similarity=0.363 Sum_probs=255.7
Q ss_pred CCCChhHHHHhhhhcCCcch--HhhhHhhcCCCCCChhhhhhccCCCcEEEecCCCceEEEEEcCceeeeChhhhHHHHH
Q psy7639 1986 DMPRGGDAAKNQVAMNPKNT--VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVL 2063 (2568)
Q Consensus 1986 ~~~~~G~~A~~~~~~~p~~t--~~~~KrliG~~~~d~~v~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~peei~a~iL 2063 (2568)
+..++|..|+.+...+|.++ +.++||+||...-++ . ....||+|++++|
T Consensus 84 ~~~~~G~~A~~~~~~~p~~~r~i~s~Kr~lg~~~~~~----------------------------~-~~~~~e~l~a~iL 134 (450)
T PRK11678 84 QSVFFGLAALAQYLEDPEEVYFVKSPKSFLGASGLKP----------------------------Q-QVALFEDLVCAMM 134 (450)
T ss_pred cccchhHHHHHhhccCCCCceEEecchhhhccCCCCc----------------------------c-ceeCHHHHHHHHH
Confidence 56789999999999999999 779999999652100 0 2234999999999
Q ss_pred HHHHHHHHHHhCCCcccEEEEccCCCC-----HHHHHH---HHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEE
Q psy7639 2064 TKMKETAEAYLGHSVRDAVITVPAYFN-----DAQRQA---TKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVL 2135 (2568)
Q Consensus 2064 ~~lk~~ae~~~g~~v~~aVItVPa~f~-----~~qR~a---~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vl 2135 (2568)
++||+.|+.++|.++.+||||||+||+ +.||+| +++||++|||++++|||||||||++||.... .++++|
T Consensus 135 ~~lk~~ae~~~g~~v~~~VItvPa~F~~~~~~~~qr~a~~~l~~Aa~~AG~~~v~li~EPtAAAl~y~~~~~--~~~~vl 212 (450)
T PRK11678 135 LHIKQQAEAQLQAAITQAVIGRPVNFQGLGGEEANRQAEGILERAAKRAGFKDVEFQFEPVAAGLDFEATLT--EEKRVL 212 (450)
T ss_pred HHHHHHHHHHhCCCCCcEEEEECCccccCCcchhHHHHHHHHHHHHHHcCCCEEEEEcCHHHHHHHhccccC--CCCeEE
Confidence 999999999999999999999999999 899988 5999999999999999999999999997543 568899
Q ss_pred EEeeCCeeeEEEEEEEcCCc------EEEEEEeccCCCcchhHHHHHHH-HHHHHHHHH----HhCCCC-----------
Q psy7639 2136 IFDLGGGTFDVSILSIDEGA------LFEVRSTAGDTHLGGEDFDNRLV-SHLAEEFKR----KYKKDM----------- 2193 (2568)
Q Consensus 2136 v~DlGggt~dvsil~~~~g~------~~~v~~~~gd~~lGG~d~D~~l~-~~~~~~f~~----~~~~d~----------- 2193 (2568)
||||||||||+||+++.++. ..+|+|++|+ +|||+|||.+|+ +|+...|.+ +++.++
T Consensus 213 V~D~GGGT~D~Svv~~~~~~~~~~~r~~~vla~~G~-~lGG~DfD~~L~~~~~~~~fg~~~~~~~g~~~p~~~~~~~~~~ 291 (450)
T PRK11678 213 VVDIGGGTTDCSMLLMGPSWRGRADRSASLLGHSGQ-RIGGNDLDIALAFKQLMPLLGMGSETEKGIALPSLPFWNAVAI 291 (450)
T ss_pred EEEeCCCeEEEEEEEecCcccccCCcceeEEecCCC-CCChHHHHHHHHHHHHHHHhhhchhhccCCcCcchhhhhhhhh
Confidence 99999999999999996431 3689999995 799999999998 688888742 222211
Q ss_pred ------------------------CCCHHHHH------------HHHHHHHHHhhccCCcceeEEEEecccCCcceEEee
Q psy7639 2194 ------------------------SVNPRALR------------RLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKI 2237 (2568)
Q Consensus 2194 ------------------------~~~~~~~~------------~L~~~~e~~K~~LS~~~~~~~~i~~~~~~~d~~~~i 2237 (2568)
..+|++++ +|+.+||+||+.||.+.++.+.++++. .++..+|
T Consensus 292 ~~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~~rl~~l~~~~~~~~L~~~aE~aK~~LS~~~~a~i~~~~~~--~~~~~~I 369 (450)
T PRK11678 292 NDVPAQSDFYSLANGRLLNDLIRDAREPEKVARLLKVWRQRLSYRLVRSAEEAKIALSDQAETRASLDFIS--DGLATEI 369 (450)
T ss_pred hccchhhhhhhhhhHHHHHHHhhccccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHcCCCCceEEEecccC--CCcceee
Confidence 12455554 688999999999999999999998765 4578999
Q ss_pred CHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCCCCCCCcchhHHhhHHHHH
Q psy7639 2238 SRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQA 2317 (2568)
Q Consensus 2238 tr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~~~~npdeava~GAa~~a 2317 (2568)
||++||++++++++++.++|+++|++++++ +|.|+||||+||||.|++.|+++||+.++ ...+|+++||.|+|+.|
T Consensus 370 tR~efe~ii~~~l~ri~~~i~~~L~~a~~~---~d~VvLvGGsSriP~V~~~l~~~fg~~~v-~~g~~~~sVa~Gla~~a 445 (450)
T PRK11678 370 SQQGLEEAISQPLARILELVQLALDQAQVK---PDVIYLTGGSARSPLIRAALAQQLPGIPI-VGGDDFGSVTAGLARWA 445 (450)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcCCC---CCEEEEcCcccchHHHHHHHHHHCCCCcE-EeCCCcchHHHHHHHHH
Confidence 999999999999999999999999999987 47899999999999999999999966554 57899999999999998
Q ss_pred HHh
Q psy7639 2318 AIL 2320 (2568)
Q Consensus 2318 a~l 2320 (2568)
+.+
T Consensus 446 ~~~ 448 (450)
T PRK11678 446 QVV 448 (450)
T ss_pred Hhh
Confidence 753
No 40
>PRK11678 putative chaperone; Provisional
Probab=100.00 E-value=2.1e-46 Score=481.47 Aligned_cols=329 Identities=27% Similarity=0.309 Sum_probs=278.6
Q ss_pred HhcccccEEEEEEcccccc--cccCCcccccccccc-----------------------------------------hh-
Q psy7639 1381 RISARNNLEAYVFNVKQAL--DNAGNKLTESEKSRC-----------------------------------------RE- 1416 (2568)
Q Consensus 1381 ~lGttns~~a~~~~~~~~~--n~~g~~~tPS~v~~~-----------------------------------------~~- 1416 (2568)
.||||||++|+|.++.+++ +.+|++++||+|+|. +.
T Consensus 6 D~GTtNs~va~~~~~~~~li~~~~~~~~~pS~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (450)
T PRK11678 6 DYGTANCSVAVMRDGKPRLLPLENDSTYLPSTLCAPTREAVSEWLYRHLDVPAYDDERQALLRRAIRYNREEDIDVTAQS 85 (450)
T ss_pred ecCccceeeEEeeCCceEEEEcCCCCCcCCeeeeccCchhhhhhhhhhcccCcccchhhhhhhhhhhhcccccccccccc
Confidence 6999999999999998887 888999999999993 11
Q ss_pred --hhhHHHHhhhcCCCcc--ccccccccccccCChhhhhcccccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHH
Q psy7639 1417 --ECDAAKNQVAMNPKNT--VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTK 1492 (2568)
Q Consensus 1417 --~G~~A~~~~~~~p~~t--v~~~k~~ig~~~~d~~~~~~~k~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~ 1492 (2568)
+|+.|+++...+|.++ +.++||+||...-.+ .....|+++++++|++
T Consensus 86 ~~~G~~A~~~~~~~p~~~r~i~s~Kr~lg~~~~~~-----------------------------~~~~~~e~l~a~iL~~ 136 (450)
T PRK11678 86 VFFGLAALAQYLEDPEEVYFVKSPKSFLGASGLKP-----------------------------QQVALFEDLVCAMMLH 136 (450)
T ss_pred cchhHHHHHhhccCCCCceEEecchhhhccCCCCc-----------------------------cceeCHHHHHHHHHHH
Confidence 5999999999999999 779999999753100 1112389999999999
Q ss_pred HHHHHHHHhCCccceEEEEecCCCC-----HHHHHH---HHHHHHHcCCceEEEEechhHHHHHhhccccccCcceEEEE
Q psy7639 1493 MKETAEAYLGHSVRDAVITVPAYFN-----DAQRQA---TKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIF 1564 (2568)
Q Consensus 1493 lk~~ae~~l~~~~~~~ViTVPa~f~-----~~qR~~---~~~Aa~~AGL~v~~li~EPtAAal~y~~~~~~~~~~~vlV~ 1564 (2568)
||+.++.++|.++.++|||||++|+ +.||++ +++||+.|||+++++++||+|||++|+... ..++++|||
T Consensus 137 lk~~ae~~~g~~v~~~VItvPa~F~~~~~~~~qr~a~~~l~~Aa~~AG~~~v~li~EPtAAAl~y~~~~--~~~~~vlV~ 214 (450)
T PRK11678 137 IKQQAEAQLQAAITQAVIGRPVNFQGLGGEEANRQAEGILERAAKRAGFKDVEFQFEPVAAGLDFEATL--TEEKRVLVV 214 (450)
T ss_pred HHHHHHHHhCCCCCcEEEEECCccccCCcchhHHHHHHHHHHHHHHcCCCEEEEEcCHHHHHHHhcccc--CCCCeEEEE
Confidence 9999999999999999999999999 888876 699999999999999999999999998654 357889999
Q ss_pred EeCCcceEEEEEEecCCc------EEEEEEecCCCCCChhHHHHHHH-HHHHHHHHhh----hcCC--------------
Q psy7639 1565 DLGGGTFDVSILSIDEGA------LFEVRSTAGDTHLGGEDFDNRLV-SHLAEEFKRK----YKKD-------------- 1619 (2568)
Q Consensus 1565 D~GGGT~Dvsi~~~~~g~------~~ev~~~~gd~~lGG~d~D~~l~-~~l~~~~~~~----~~~~-------------- 1619 (2568)
||||||||+||+++.++. ..+|++++| .++||.|||.+|+ +++..+|.+. .+.+
T Consensus 215 D~GGGT~D~Svv~~~~~~~~~~~r~~~vla~~G-~~lGG~DfD~~L~~~~~~~~fg~~~~~~~g~~~p~~~~~~~~~~~~ 293 (450)
T PRK11678 215 DIGGGTTDCSMLLMGPSWRGRADRSASLLGHSG-QRIGGNDLDIALAFKQLMPLLGMGSETEKGIALPSLPFWNAVAIND 293 (450)
T ss_pred EeCCCeEEEEEEEecCcccccCCcceeEEecCC-CCCChHHHHHHHHHHHHHHHhhhchhhccCCcCcchhhhhhhhhhc
Confidence 999999999999985431 468999999 5799999999998 5777777521 1110
Q ss_pred ---------------------CCCCHHHHH------------HHHHHHHHhhcccCCCCeeEEEEccccCCcceeeecCH
Q psy7639 1620 ---------------------MSVNPRALR------------RLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISR 1666 (2568)
Q Consensus 1620 ---------------------~~~~~~~~~------------~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~~~~~~~itr 1666 (2568)
...++..+. +|+.+||++|+.||....+.+.++... .++..+|||
T Consensus 294 i~~~~~~~~~~~~~~~~~~~~~~~~p~~~~rl~~l~~~~~~~~L~~~aE~aK~~LS~~~~a~i~~~~~~--~~~~~~ItR 371 (450)
T PRK11678 294 VPAQSDFYSLANGRLLNDLIRDAREPEKVARLLKVWRQRLSYRLVRSAEEAKIALSDQAETRASLDFIS--DGLATEISQ 371 (450)
T ss_pred cchhhhhhhhhhHHHHHHHhhccccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHcCCCCceEEEecccC--CCcceeeCH
Confidence 011333333 688999999999999999999887654 346789999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHHH
Q psy7639 1667 ARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAI 1746 (2568)
Q Consensus 1667 ~~fe~l~~pli~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~ 1746 (2568)
++|+++++|+++++..+|+++|+++++. ++.|+||||+|+||.|++.|++.|++.++. ..+|.++||.|+|++|..
T Consensus 372 ~efe~ii~~~l~ri~~~i~~~L~~a~~~---~d~VvLvGGsSriP~V~~~l~~~fg~~~v~-~g~~~~sVa~Gla~~a~~ 447 (450)
T PRK11678 372 QGLEEAISQPLARILELVQLALDQAQVK---PDVIYLTGGSARSPLIRAALAQQLPGIPIV-GGDDFGSVTAGLARWAQV 447 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCC---CCEEEEcCcccchHHHHHHHHHHCCCCcEE-eCCCcchHHHHHHHHHHh
Confidence 9999999999999999999999999876 478999999999999999999999765554 569999999999999865
Q ss_pred H
Q psy7639 1747 L 1747 (2568)
Q Consensus 1747 l 1747 (2568)
+
T Consensus 448 ~ 448 (450)
T PRK11678 448 V 448 (450)
T ss_pred h
Confidence 4
No 41
>PRK13928 rod shape-determining protein Mbl; Provisional
Probab=100.00 E-value=1.6e-31 Score=338.23 Aligned_cols=245 Identities=22% Similarity=0.384 Sum_probs=201.3
Q ss_pred hhhhHHHHHHHHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceE
Q psy7639 2055 PEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNV 2134 (2568)
Q Consensus 2055 peei~a~iL~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~v 2134 (2568)
+.+++..+|+++.+.+....+.....+|||||+||++.||+++++|++.||++++++|+||+|||++||++.. .+..+
T Consensus 72 d~~~~~~~l~~~~~~~~~~~~~~~p~~vitvP~~~~~~~r~~~~~a~~~ag~~~~~li~ep~Aaa~~~g~~~~--~~~~~ 149 (336)
T PRK13928 72 DYDVTEKMLKYFINKACGKRFFSKPRIMICIPTGITSVEKRAVREAAEQAGAKKVYLIEEPLAAAIGAGLDIS--QPSGN 149 (336)
T ss_pred cHHHHHHHHHHHHHHHhccCCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCceEecccHHHHHHHcCCccc--CCCeE
Confidence 3456666777776544433233344799999999999999999999999999999999999999999998653 45679
Q ss_pred EEEeeCCeeeEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhcc
Q psy7639 2135 LIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTL 2214 (2568)
Q Consensus 2135 lv~DlGggt~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~L 2214 (2568)
+|||+||||||+|++... + .+ +.++..+||+|||+.|++|+..+|... +. ..+||++|+.+
T Consensus 150 lVvDiGggttdvsvv~~g-~-~~----~~~~~~lGG~did~~i~~~l~~~~~~~----~~---------~~~ae~lK~~~ 210 (336)
T PRK13928 150 MVVDIGGGTTDIAVLSLG-G-IV----TSSSIKVAGDKFDEAIIRYIRKKYKLL----IG---------ERTAEEIKIKI 210 (336)
T ss_pred EEEEeCCCeEEEEEEEeC-C-EE----EeCCcCCHHHHHHHHHHHHHHHHhchh----cC---------HHHHHHHHHHh
Confidence 999999999999999974 3 22 456889999999999999998766422 21 25699999998
Q ss_pred CCc----ceeEEEE--ecccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcC--CCccCcc-eEEEecCccChHH
Q psy7639 2215 SSS----TEASIEI--DALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAK--LDKSAIH-DVVLVGGSTRIPK 2285 (2568)
Q Consensus 2215 S~~----~~~~~~i--~~~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~--~~~~~i~-~vilvGGstriP~ 2285 (2568)
+.. ....+.+ ..+..+.++..+|||++|++++.++++++.++++++|+.++ +..+.++ .|+|+||+|+||.
T Consensus 211 ~~~~~~~~~~~~~v~g~~~~~~~~~~~~i~~~~~~eii~~~~~~i~~~i~~~l~~~~~~~~~~~i~~~IvL~GG~s~ipg 290 (336)
T PRK13928 211 GTAFPGAREEEMEIRGRDLVTGLPKTITVTSEEIREALKEPVSAIVQAVKSVLERTPPELSADIIDRGIIMTGGGALLHG 290 (336)
T ss_pred cccccccCCcEEEEecccccCCCceEEEECHHHHHHHHHHHHHHHHHHHHHHHHhCCccccHhhcCCCEEEECcccchhh
Confidence 763 1233333 23456677889999999999999999999999999999997 5678888 7999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCcchhHHhhHHHHHHHhh
Q psy7639 2286 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 2321 (2568)
Q Consensus 2286 v~~~l~~~f~~~~~~~~~npdeava~GAa~~aa~ls 2321 (2568)
|++.|++.| +.++....||++|||+|||++++.+.
T Consensus 291 i~e~l~~~~-~~~v~~~~~P~~ava~Gaa~~~~~~~ 325 (336)
T PRK13928 291 LDKLLAEET-KVPVYIAEDPISCVALGTGKMLENID 325 (336)
T ss_pred HHHHHHHHH-CCCceecCCHHHHHHHHHHHHHhchH
Confidence 999999999 56777788999999999999998753
No 42
>PRK13928 rod shape-determining protein Mbl; Provisional
Probab=100.00 E-value=1.9e-31 Score=337.72 Aligned_cols=308 Identities=21% Similarity=0.333 Sum_probs=238.2
Q ss_pred cccccCcccccchhhhccCCCCceeeecccccccccccCC-Cc-eeecHHHHHhHhhCCCchHHhhhhhcCCCCCChhHH
Q psy7639 4 SYIAEGPCAISPAQRRVMRDPGRVVERAALELRVKSLTNP-LS-YFTGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQ 81 (2568)
Q Consensus 4 ~~~~~g~~~~~~a~~~~~~~~~~~~e~~~~~~~v~~~~~~-~~-~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 81 (2568)
+||||||++|+++.. ..| +...+.+++.+... ++ +.+|+.|++++.+.|.+.... +++.+
T Consensus 6 ~gIDlGt~~~~i~~~----~~~----~v~~~psvv~~~~~~~~i~~vG~~A~~~~~~~p~~~~~~------~pi~~---- 67 (336)
T PRK13928 6 IGIDLGTANVLVYVK----GKG----IVLNEPSVVAIDKNTNKVLAVGEEARRMVGRTPGNIVAI------RPLRD---- 67 (336)
T ss_pred eEEEcccccEEEEEC----CCC----EEEccCCEEEEECCCCeEEEecHHHHHhhhcCCCCEEEE------ccCCC----
Confidence 799999999999774 222 23336788888743 23 479999999888887775421 11111
Q ss_pred hhcccCCeEEEecCCCCcEEEEEcCcceeecHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy7639 82 QDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAI 161 (2568)
Q Consensus 82 ~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~speel~a~~L~~l~~~ae~~l~~~~~~~VITVPa~f~~~qr~al~~Aa~~ 161 (2568)
..+...+....+|+++.+.+..........+|||||++|+..||+++++|++.
T Consensus 68 ---------------------------G~i~d~~~~~~~l~~~~~~~~~~~~~~~p~~vitvP~~~~~~~r~~~~~a~~~ 120 (336)
T PRK13928 68 ---------------------------GVIADYDVTEKMLKYFINKACGKRFFSKPRIMICIPTGITSVEKRAVREAAEQ 120 (336)
T ss_pred ---------------------------CeEecHHHHHHHHHHHHHHHhccCCCCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 12233456677778887655433223345799999999999999999999999
Q ss_pred cCCcEEEEecchhHHHHhhccccccCCCceEEEEEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHHHHHHHHH
Q psy7639 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241 (2568)
Q Consensus 162 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~ 241 (2568)
||++.+.+++||+|||++|+.+. ..+..++|||+||||||+++++.. ..+ ..++..+||++||+.|.+++.+
T Consensus 121 ag~~~~~li~ep~Aaa~~~g~~~--~~~~~~lVvDiGggttdvsvv~~g--~~~----~~~~~~lGG~did~~i~~~l~~ 192 (336)
T PRK13928 121 AGAKKVYLIEEPLAAAIGAGLDI--SQPSGNMVVDIGGGTTDIAVLSLG--GIV----TSSSIKVAGDKFDEAIIRYIRK 192 (336)
T ss_pred cCCCceEecccHHHHHHHcCCcc--cCCCeEEEEEeCCCeEEEEEEEeC--CEE----EeCCcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999998853 346779999999999999999873 221 2356899999999999999987
Q ss_pred HHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCCCC----ceEEEEe--eeccCcceEEeecHHHHHHHHhhhhhhhHHHH
Q psy7639 242 EFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSST----EASIEID--ALYDGIDFYTKISRARFEELCSDLFRSTLQPV 315 (2568)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~----~~~i~i~--~l~~~~d~~~~itR~efe~l~~~l~~~i~~~i 315 (2568)
++...+ . ...||++|+.++... ...+.+. .+..+.+..+.|+|++|++++.++++++...+
T Consensus 193 ~~~~~~----~---------~~~ae~lK~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~i~~~~~~eii~~~~~~i~~~i 259 (336)
T PRK13928 193 KYKLLI----G---------ERTAEEIKIKIGTAFPGAREEEMEIRGRDLVTGLPKTITVTSEEIREALKEPVSAIVQAV 259 (336)
T ss_pred Hhchhc----C---------HHHHHHHHHHhcccccccCCcEEEEecccccCCCceEEEECHHHHHHHHHHHHHHHHHHH
Confidence 664211 1 247999999987531 1233332 23445677899999999999999999999999
Q ss_pred HHHHHHcC--CCCCCCC-eEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHH
Q psy7639 316 EKALQDAK--LDKSAIH-DVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAIL 378 (2568)
Q Consensus 316 ~~~l~~a~--~~~~~i~-~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~l 378 (2568)
++.|+.++ +....++ .|+|+||+|++|.++++|++.| +.++....||++|||+|||+++..+
T Consensus 260 ~~~l~~~~~~~~~~~i~~~IvL~GG~s~ipgi~e~l~~~~-~~~v~~~~~P~~ava~Gaa~~~~~~ 324 (336)
T PRK13928 260 KSVLERTPPELSADIIDRGIIMTGGGALLHGLDKLLAEET-KVPVYIAEDPISCVALGTGKMLENI 324 (336)
T ss_pred HHHHHhCCccccHhhcCCCEEEECcccchhhHHHHHHHHH-CCCceecCCHHHHHHHHHHHHHhch
Confidence 99999987 3445677 7999999999999999999999 6778788899999999999998765
No 43
>PRK13929 rod-share determining protein MreBH; Provisional
Probab=99.98 E-value=3.4e-31 Score=333.97 Aligned_cols=307 Identities=22% Similarity=0.348 Sum_probs=244.2
Q ss_pred cccccccCcccccchhhhccCCCCceeeecccccccccccCCCc--eeecHHHHHhHhhCCCchHHhhhhhcCCCCCChh
Q psy7639 2 KESYIAEGPCAISPAQRRVMRDPGRVVERAALELRVKSLTNPLS--YFTGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPK 79 (2568)
Q Consensus 2 ~~~~~~~g~~~~~~a~~~~~~~~~~~~e~~~~~~~v~~~~~~~~--~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 79 (2568)
..+||||||+++.+. . .++. +..++.+++.+..... .+||++|+++..++|.++... | ++.+
T Consensus 5 ~~~giDlGt~~~~i~-----~-~~~~--~~~~~ps~va~~~~~~~~~~vG~~A~~~~~~~p~~~~~~--~----pi~~-- 68 (335)
T PRK13929 5 TEIGIDLGTANILVY-----S-KNKG--IILNEPSVVAVDTETKAVLAIGTEAKNMIGKTPGKIVAV--R----PMKD-- 68 (335)
T ss_pred CeEEEEcccccEEEE-----E-CCCc--EEecCCcEEEEECCCCeEEEeCHHHHHhhhcCCCcEEEE--e----cCCC--
Confidence 358999999999742 1 2332 4568999999975443 689999999999999987553 2 2111
Q ss_pred HHhhcccCCeEEEecCCCCcEEEEEcCcceeecHHHHHHHHHHHHHHHHHHHhCCCCC--eEEEEecCCCCHHHHHHHHH
Q psy7639 80 IQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVR--DAVITVPAYFNDAQRQATKD 157 (2568)
Q Consensus 80 v~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~speel~a~~L~~l~~~ae~~l~~~~~--~~VITVPa~f~~~qr~al~~ 157 (2568)
| .+..-++++++|++++..++..++..+. .+|||||++|++.||+++.+
T Consensus 69 --------------------------G---~I~d~d~~~~~l~~~~~~~~~~l~~~~~~~~vvitvP~~~~~~~R~~l~~ 119 (335)
T PRK13929 69 --------------------------G---VIADYDMTTDLLKQIMKKAGKNIGMTFRKPNVVVCTPSGSTAVERRAISD 119 (335)
T ss_pred --------------------------C---ccCCHHHHHHHHHHHHHHHHHhcCCCCCCCeEEEEcCCCCCHHHHHHHHH
Confidence 0 1122278899999999999888886654 89999999999999999999
Q ss_pred HHHHcCCcEEEEecchhHHHHhhccccccCCCceEEEEEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHHHHH
Q psy7639 158 AGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS 237 (2568)
Q Consensus 158 Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~ 237 (2568)
|++.||++++.+++||+|||++|+... ..+..++|+|+||||||++++++. + .. ..++..+||.+||+.|.+
T Consensus 120 a~~~ag~~~~~li~ep~Aaa~~~g~~~--~~~~~~lvvDiG~gtt~v~vi~~~-~-~~----~~~~~~~GG~~id~~l~~ 191 (335)
T PRK13929 120 AVKNCGAKNVHLIEEPVAAAIGADLPV--DEPVANVVVDIGGGTTEVAIISFG-G-VV----SCHSIRIGGDQLDEDIVS 191 (335)
T ss_pred HHHHcCCCeeEeecCHHHHHHhcCCCc--CCCceEEEEEeCCCeEEEEEEEeC-C-EE----EecCcCCHHHHHHHHHHH
Confidence 999999999999999999999998753 346789999999999999999863 2 21 234578999999999999
Q ss_pred HHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCCCC----ceEEEEe--eeccCcceEEeecHHHHHHHHhhhhhhh
Q psy7639 238 HLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSST----EASIEID--ALYDGIDFYTKISRARFEELCSDLFRST 311 (2568)
Q Consensus 238 ~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~----~~~i~i~--~l~~~~d~~~~itR~efe~l~~~l~~~i 311 (2568)
++.+.+. ... + ...||++|+.++... ...+.+. .+..+.+..+.++|++|+++|.+++.++
T Consensus 192 ~l~~~~~----~~~--~-------~~~AE~iK~~l~~~~~~~~~~~~~v~g~~~~~~~p~~i~i~~~~~~~~i~~~l~~i 258 (335)
T PRK13929 192 FVRKKYN----LLI--G-------ERTAEQVKMEIGYALIEHEPETMEVRGRDLVTGLPKTITLESKEIQGAMRESLLHI 258 (335)
T ss_pred HHHHHhC----cCc--C-------HHHHHHHHHHHcCCCCCCCCceEEEeCCccCCCCCeEEEEcHHHHHHHHHHHHHHH
Confidence 9876542 221 1 257999999998632 2223332 2334556789999999999999999999
Q ss_pred HHHHHHHHHHcCCCC--CCCC-eEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHH
Q psy7639 312 LQPVEKALQDAKLDK--SAIH-DVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQA 375 (2568)
Q Consensus 312 ~~~i~~~l~~a~~~~--~~i~-~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~a 375 (2568)
...|.++|+.++... ..++ .|+|+||+|++|.++++|++.| +.++....||+++||.||+..-
T Consensus 259 ~~~i~~~L~~~~~~l~~~~~~~gIvLtGG~s~lpgl~e~l~~~~-~~~v~~~~~P~~~Va~Ga~~~~ 324 (335)
T PRK13929 259 LEAIRATLEDCPPELSGDIVDRGVILTGGGALLNGIKEWLSEEI-VVPVHVAANPLESVAIGTGRSL 324 (335)
T ss_pred HHHHHHHHHhCCcccchhhcCCCEEEEchhhhhhhHHHHHHHHH-CCCceeCCCHHHHHHHHHHHHH
Confidence 999999999987543 5577 6999999999999999999999 6788878899999999999864
No 44
>PRK13929 rod-share determining protein MreBH; Provisional
Probab=99.97 E-value=1.2e-30 Score=328.93 Aligned_cols=271 Identities=22% Similarity=0.385 Sum_probs=223.2
Q ss_pred CChhHHHHhhhhcCCcchHhhhHhhcCCCCCChhhhhhccCCCcEEEecCCCceEEEEEcCceeeeChhhhHHHHHHHHH
Q psy7639 1988 PRGGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMK 2067 (2568)
Q Consensus 1988 ~~~G~~A~~~~~~~p~~t~~~~KrliG~~~~d~~v~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~~peei~a~iL~~lk 2067 (2568)
..||+.|+.+..++|.++... | ++.+ | ....-++++++|++++
T Consensus 43 ~~vG~~A~~~~~~~p~~~~~~--~----pi~~------------------G-------------~I~d~d~~~~~l~~~~ 85 (335)
T PRK13929 43 LAIGTEAKNMIGKTPGKIVAV--R----PMKD------------------G-------------VIADYDMTTDLLKQIM 85 (335)
T ss_pred EEeCHHHHHhhhcCCCcEEEE--e----cCCC------------------C-------------ccCCHHHHHHHHHHHH
Confidence 579999999999999887652 2 2111 1 1122279999999999
Q ss_pred HHHHHHhCCCcc--cEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCeeeE
Q psy7639 2068 ETAEAYLGHSVR--DAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFD 2145 (2568)
Q Consensus 2068 ~~ae~~~g~~v~--~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt~d 2145 (2568)
+.|+.++|..+. .+|||||+||++.||+++.+|++.||+++++||+||+|||++||+... .+..++|||+||||+|
T Consensus 86 ~~~~~~l~~~~~~~~vvitvP~~~~~~~R~~l~~a~~~ag~~~~~li~ep~Aaa~~~g~~~~--~~~~~lvvDiG~gtt~ 163 (335)
T PRK13929 86 KKAGKNIGMTFRKPNVVVCTPSGSTAVERRAISDAVKNCGAKNVHLIEEPVAAAIGADLPVD--EPVANVVVDIGGGTTE 163 (335)
T ss_pred HHHHHhcCCCCCCCeEEEEcCCCCCHHHHHHHHHHHHHcCCCeeEeecCHHHHHHhcCCCcC--CCceEEEEEeCCCeEE
Confidence 999999987665 799999999999999999999999999999999999999999998653 4578999999999999
Q ss_pred EEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcc----eeE
Q psy7639 2146 VSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSST----EAS 2221 (2568)
Q Consensus 2146 vsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~----~~~ 2221 (2568)
++++.+. | .+ ..++..+||+|||+.|++||.+.+ +.... ...||++|+.|+... ...
T Consensus 164 v~vi~~~-~-~~----~~~~~~~GG~~id~~l~~~l~~~~----~~~~~---------~~~AE~iK~~l~~~~~~~~~~~ 224 (335)
T PRK13929 164 VAIISFG-G-VV----SCHSIRIGGDQLDEDIVSFVRKKY----NLLIG---------ERTAEQVKMEIGYALIEHEPET 224 (335)
T ss_pred EEEEEeC-C-EE----EecCcCCHHHHHHHHHHHHHHHHh----CcCcC---------HHHHHHHHHHHcCCCCCCCCce
Confidence 9999874 4 22 356788999999999999997644 33321 257999999998732 223
Q ss_pred EEEe--cccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCC--ccCcc-eEEEecCccChHHHHHHHHHhcCC
Q psy7639 2222 IEID--ALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLD--KSAIH-DVVLVGGSTRIPKVQSLLQNFFCG 2296 (2568)
Q Consensus 2222 ~~i~--~~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~--~~~i~-~vilvGGstriP~v~~~l~~~f~~ 2296 (2568)
+.+. ++..+....++|+|++|++++.+++.++.+.+.++|+++... .+.++ .|+|+||+|+||.+++.|++.| +
T Consensus 225 ~~v~g~~~~~~~p~~i~i~~~~~~~~i~~~l~~i~~~i~~~L~~~~~~l~~~~~~~gIvLtGG~s~lpgl~e~l~~~~-~ 303 (335)
T PRK13929 225 MEVRGRDLVTGLPKTITLESKEIQGAMRESLLHILEAIRATLEDCPPELSGDIVDRGVILTGGGALLNGIKEWLSEEI-V 303 (335)
T ss_pred EEEeCCccCCCCCeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhcCCCEEEEchhhhhhhHHHHHHHHH-C
Confidence 3332 344566678999999999999999999999999999998644 47788 5999999999999999999999 5
Q ss_pred CCCCCCCCcchhHHhhHHHHH
Q psy7639 2297 KSLNLSINPDEAVAYGAAVQA 2317 (2568)
Q Consensus 2297 ~~~~~~~npdeava~GAa~~a 2317 (2568)
.++....||+++||+||+..-
T Consensus 304 ~~v~~~~~P~~~Va~Ga~~~~ 324 (335)
T PRK13929 304 VPVHVAANPLESVAIGTGRSL 324 (335)
T ss_pred CCceeCCCHHHHHHHHHHHHH
Confidence 677778899999999999764
No 45
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family. A close homolog is found in the Archaeon Methanobacterium thermoautotrophicum, and a more distant homolog in Archaeoglobus fulgidus. The family is related to cell division protein FtsA and heat shock protein DnaK.
Probab=99.96 E-value=2.4e-28 Score=309.32 Aligned_cols=308 Identities=22% Similarity=0.338 Sum_probs=227.1
Q ss_pred ccccccCcccccchhhhccCCCCceeeecccccccccccCC------CceeecHHHHHhHhhCCCchHHhhhhhcCCCCC
Q psy7639 3 ESYIAEGPCAISPAQRRVMRDPGRVVERAALELRVKSLTNP------LSYFTGDAAKNQVAMNPKNTVFDAKRLIGRKFD 76 (2568)
Q Consensus 3 ~~~~~~g~~~~~~a~~~~~~~~~~~~e~~~~~~~v~~~~~~------~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~ 76 (2568)
..||||||++|.++.. ++ .+...+.+++.+.+. .-++||+.|+.++.+.|.++. +++-|...
T Consensus 4 ~~giDlGt~~s~i~~~------~~--~~~~~~psvv~~~~~~~~~~~~~~~vG~~A~~~~~~~~~~~~--~~~pi~~G-- 71 (333)
T TIGR00904 4 DIGIDLGTANTLVYVK------GR--GIVLNEPSVVAIRTDRDAKTKSILAVGHEAKEMLGKTPGNIV--AIRPMKDG-- 71 (333)
T ss_pred eeEEecCcceEEEEEC------CC--CEEEecCCEEEEecCCCCCCCeEEEEhHHHHHhhhcCCCCEE--EEecCCCC--
Confidence 3899999999998773 21 223457888898643 237899999998888887753 23222110
Q ss_pred ChhHHhhcccCCeEEEecCCCCcEEEEEcCcceeecHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCHHHHHHHH
Q psy7639 77 DPKIQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATK 156 (2568)
Q Consensus 77 d~~v~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~speel~a~~L~~l~~~ae~~l~~~~~~~VITVPa~f~~~qr~al~ 156 (2568)
+ .... +.+..+++++........+.....+|||||++|+..+|++++
T Consensus 72 -----------------------~---------i~d~-~~~~~~~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~ 118 (333)
T TIGR00904 72 -----------------------V---------IADF-EVTEKMIKYFIKQVHSRKSFFKPRIVICVPSGITPVERRAVK 118 (333)
T ss_pred -----------------------E---------EEcH-HHHHHHHHHHHHHHhcccccCCCcEEEEeCCCCCHHHHHHHH
Confidence 0 0111 223334444443332222222238999999999999999999
Q ss_pred HHHHHcCCcEEEEecchhHHHHhhccccccCCCceEEEEEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHHHH
Q psy7639 157 DAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLV 236 (2568)
Q Consensus 157 ~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~ 236 (2568)
+|++.||++.+.+++||+|||++|+... ..+..++|||+||||||++++++. + . + ..++..+||++||+.|+
T Consensus 119 ~~~~~ag~~~~~li~ep~aaa~~~g~~~--~~~~~~lVvDiG~gttdvs~v~~~-~-~--~--~~~~~~lGG~did~~l~ 190 (333)
T TIGR00904 119 ESALSAGAREVYLIEEPMAAAIGAGLPV--EEPTGSMVVDIGGGTTEVAVISLG-G-I--V--VSRSIRVGGDEFDEAII 190 (333)
T ss_pred HHHHHcCCCeEEEecCHHHHHHhcCCcc--cCCceEEEEEcCCCeEEEEEEEeC-C-E--E--ecCCccchHHHHHHHHH
Confidence 9999999999999999999999998753 346679999999999999999874 2 1 1 23456899999999999
Q ss_pred HHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCCCCc-----eEEEEee--eccCcceEEeecHHHHHHHHhhhhh
Q psy7639 237 SHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTE-----ASIEIDA--LYDGIDFYTKISRARFEELCSDLFR 309 (2568)
Q Consensus 237 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~~-----~~i~i~~--l~~~~d~~~~itR~efe~l~~~l~~ 309 (2568)
+++.+++. ... . +..||++|+.++.... ..+.+.. ...+.+....|+|++|.+++.+.+.
T Consensus 191 ~~l~~~~~----~~~--~-------~~~ae~lK~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~i~~~~~ 257 (333)
T TIGR00904 191 NYIRRTYN----LLI--G-------EQTAERIKIEIGSAYPLNDEPRKMEVRGRDLVTGLPRTIEITSVEVREALQEPVN 257 (333)
T ss_pred HHHHHHhc----ccC--C-------HHHHHHHHHHHhccccccccccceeecCccccCCCCeEEEECHHHHHHHHHHHHH
Confidence 99876542 111 1 3578999999975322 2222211 1223445678999999999999999
Q ss_pred hhHHHHHHHHHHcCCCC-CCC-C-eEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHH
Q psy7639 310 STLQPVEKALQDAKLDK-SAI-H-DVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAI 377 (2568)
Q Consensus 310 ~i~~~i~~~l~~a~~~~-~~i-~-~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ 377 (2568)
++...+.+.|+.++... .++ + .|+|+||+|++|.++++|++.| +.++....||+++||.||++++..
T Consensus 258 ~i~~~i~~~l~~~~~~~~~~l~~~~IvL~GGss~ipgl~e~l~~~~-~~~v~~~~~P~~~va~Ga~~~~~~ 327 (333)
T TIGR00904 258 QIVEAVKRTLEKTPPELAADIVERGIVLTGGGALLRNLDKLLSKET-GLPVIVADDPLLCVAKGTGKALED 327 (333)
T ss_pred HHHHHHHHHHHhCCchhhhhhccCCEEEECcccchhhHHHHHHHHH-CCCceecCChHHHHHHHHHHHHhC
Confidence 99999999999987542 233 3 6999999999999999999999 678888899999999999998654
No 46
>PRK13927 rod shape-determining protein MreB; Provisional
Probab=99.96 E-value=2.3e-28 Score=310.31 Aligned_cols=308 Identities=21% Similarity=0.347 Sum_probs=228.9
Q ss_pred ccccccCcccccchhhhccCCCCceeeecccccccccccCC-C-ceeecHHHHHhHhhCCCchHHhhhhhcCCCCCChhH
Q psy7639 3 ESYIAEGPCAISPAQRRVMRDPGRVVERAALELRVKSLTNP-L-SYFTGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKI 80 (2568)
Q Consensus 3 ~~~~~~g~~~~~~a~~~~~~~~~~~~e~~~~~~~v~~~~~~-~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 80 (2568)
..||||||+++++... |+-. ..+..+++.++.. . .++||+.|+++..+.|.++...
T Consensus 7 ~igIDlGt~~~~i~~~------~~~~--~~~~ps~v~~~~~~~~~~~vG~~a~~~~~~~~~~~~~~-------------- 64 (334)
T PRK13927 7 DLGIDLGTANTLVYVK------GKGI--VLNEPSVVAIRTDTKKVLAVGEEAKQMLGRTPGNIVAI-------------- 64 (334)
T ss_pred eeEEEcCcceEEEEEC------CCcE--EEecCCEEEEECCCCeEEEecHHHHHHhhcCCCCEEEE--------------
Confidence 3799999999997432 2222 3357888888654 3 3589999999998888875321
Q ss_pred HhhcccCCeEEEecCCCCcEEEEEcCcceeecHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCHHHHHHHHHHHH
Q psy7639 81 QQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGA 160 (2568)
Q Consensus 81 ~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~speel~a~~L~~l~~~ae~~l~~~~~~~VITVPa~f~~~qr~al~~Aa~ 160 (2568)
+|+. + +.. ..+ +.+..+|+++.......... ...+|||||++|++.+|+++++|++
T Consensus 65 ------~pi~------~-G~i-------~d~---~~~~~ll~~~~~~~~~~~~~-~~~~vi~vP~~~~~~~r~~~~~a~~ 120 (334)
T PRK13927 65 ------RPMK------D-GVI-------ADF---DVTEKMLKYFIKKVHKNFRP-SPRVVICVPSGITEVERRAVRESAL 120 (334)
T ss_pred ------ecCC------C-Cee-------cCH---HHHHHHHHHHHHHHhhccCC-CCcEEEEeCCCCCHHHHHHHHHHHH
Confidence 1110 0 000 011 22344455544433222221 2489999999999999999999999
Q ss_pred HcCCcEEEEecchhHHHHhhccccccCCCceEEEEEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHHHHHHHH
Q psy7639 161 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLA 240 (2568)
Q Consensus 161 ~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~ 240 (2568)
.||++.+.+++||+|||++|+... ..+..++|||+||||||++++++.. . . ..++.++||.+||+.|.+++.
T Consensus 121 ~ag~~~~~li~ep~aaa~~~g~~~--~~~~~~lvvDiGggttdvs~v~~~~--~-~---~~~~~~lGG~~id~~l~~~l~ 192 (334)
T PRK13927 121 GAGAREVYLIEEPMAAAIGAGLPV--TEPTGSMVVDIGGGTTEVAVISLGG--I-V---YSKSVRVGGDKFDEAIINYVR 192 (334)
T ss_pred HcCCCeeccCCChHHHHHHcCCcc--cCCCeEEEEEeCCCeEEEEEEecCC--e-E---eeCCcCChHHHHHHHHHHHHH
Confidence 999999999999999999998753 3456789999999999999998742 1 1 234468999999999999997
Q ss_pred HHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCCCCc----eEEEE--eeeccCcceEEeecHHHHHHHHhhhhhhhHHH
Q psy7639 241 EEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTE----ASIEI--DALYDGIDFYTKISRARFEELCSDLFRSTLQP 314 (2568)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~~----~~i~i--~~l~~~~d~~~~itR~efe~l~~~l~~~i~~~ 314 (2568)
+++. ... + ...||++|+.++.... ..+.+ +.+..+.+..+.|+|++|++++.+.+.++...
T Consensus 193 ~~~~----~~~--~-------~~~ae~iK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~i~~~~~~i~~~ 259 (334)
T PRK13927 193 RNYN----LLI--G-------ERTAERIKIEIGSAYPGDEVLEMEVRGRDLVTGLPKTITISSNEIREALQEPLSAIVEA 259 (334)
T ss_pred HHhC----cCc--C-------HHHHHHHHHHhhccCCCCCCceEEEeCcccCCCCCeEEEECHHHHHHHHHHHHHHHHHH
Confidence 6553 211 1 2468999999875332 22333 23345566788999999999999999999999
Q ss_pred HHHHHHHcCCCC--CCCC-eEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHH
Q psy7639 315 VEKALQDAKLDK--SAIH-DVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAIL 378 (2568)
Q Consensus 315 i~~~l~~a~~~~--~~i~-~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~l 378 (2568)
|.++|+.++... ..++ .|+|+||+|++|.++++|++.| +.++....||+++||+|||+++..+
T Consensus 260 i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipgl~~~l~~~~-~~~v~~~~~P~~ava~Ga~~~~~~~ 325 (334)
T PRK13927 260 VKVALEQTPPELAADIVDRGIVLTGGGALLRGLDKLLSEET-GLPVHVAEDPLTCVARGTGKALENI 325 (334)
T ss_pred HHHHHHHCCchhhhhhhcCCEEEECchhhhhHHHHHHHHHH-CCCcEecCCHHHHHHHHHHHHHhhH
Confidence 999999986432 2244 5999999999999999999999 5778888899999999999998753
No 47
>PRK13927 rod shape-determining protein MreB; Provisional
Probab=99.96 E-value=2.5e-28 Score=309.99 Aligned_cols=220 Identities=24% Similarity=0.424 Sum_probs=184.0
Q ss_pred ccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCeeeEEEEEEEcCCcEEE
Q psy7639 2079 RDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFE 2158 (2568)
Q Consensus 2079 ~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt~dvsil~~~~g~~~~ 2158 (2568)
..+|||||++|++.||+++++|++.||++++++++||+|||++||+... .+..++|||+||||||++++++. | .
T Consensus 97 ~~~vi~vP~~~~~~~r~~~~~a~~~ag~~~~~li~ep~aaa~~~g~~~~--~~~~~lvvDiGggttdvs~v~~~-~-~-- 170 (334)
T PRK13927 97 PRVVICVPSGITEVERRAVRESALGAGAREVYLIEEPMAAAIGAGLPVT--EPTGSMVVDIGGGTTEVAVISLG-G-I-- 170 (334)
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHcCCCeeccCCChHHHHHHcCCccc--CCCeEEEEEeCCCeEEEEEEecC-C-e--
Confidence 3899999999999999999999999999999999999999999998653 35678999999999999999875 4 2
Q ss_pred EEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcce----eEEEE--ecccCCcc
Q psy7639 2159 VRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTE----ASIEI--DALYDGID 2232 (2568)
Q Consensus 2159 v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~----~~~~i--~~~~~~~d 2232 (2568)
...++.++||+|||+.|.+|+.++| +... + ...||++|+.|+.... ..+.+ +++..+.+
T Consensus 171 --~~~~~~~lGG~~id~~l~~~l~~~~----~~~~--~-------~~~ae~iK~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (334)
T PRK13927 171 --VYSKSVRVGGDKFDEAIINYVRRNY----NLLI--G-------ERTAERIKIEIGSAYPGDEVLEMEVRGRDLVTGLP 235 (334)
T ss_pred --EeeCCcCChHHHHHHHHHHHHHHHh----CcCc--C-------HHHHHHHHHHhhccCCCCCCceEEEeCcccCCCCC
Confidence 1346678999999999999997654 3322 1 2468999999886432 22333 34556777
Q ss_pred eEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCC--ccCcc-eEEEecCccChHHHHHHHHHhcCCCCCCCCCCcchhH
Q psy7639 2233 FYTKISRARFEELCSDLFRSTLQPVEKALQDAKLD--KSAIH-DVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAV 2309 (2568)
Q Consensus 2233 ~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~--~~~i~-~vilvGGstriP~v~~~l~~~f~~~~~~~~~npdeav 2309 (2568)
+.++|+|++|++++.++++++.+.+.++|+++... .+.++ .|+|+||+|+||.+++.|++.| +.++....||+++|
T Consensus 236 ~~~~i~~~~~~e~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipgl~~~l~~~~-~~~v~~~~~P~~av 314 (334)
T PRK13927 236 KTITISSNEIREALQEPLSAIVEAVKVALEQTPPELAADIVDRGIVLTGGGALLRGLDKLLSEET-GLPVHVAEDPLTCV 314 (334)
T ss_pred eEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCchhhhhhhcCCEEEECchhhhhHHHHHHHHHH-CCCcEecCCHHHHH
Confidence 88999999999999999999999999999998754 33344 5999999999999999999999 56777788999999
Q ss_pred HhhHHHHHHHh
Q psy7639 2310 AYGAAVQAAIL 2320 (2568)
Q Consensus 2310 a~GAa~~aa~l 2320 (2568)
|+|||+++..+
T Consensus 315 a~Ga~~~~~~~ 325 (334)
T PRK13927 315 ARGTGKALENI 325 (334)
T ss_pred HHHHHHHHhhH
Confidence 99999998763
No 48
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family. A close homolog is found in the Archaeon Methanobacterium thermoautotrophicum, and a more distant homolog in Archaeoglobus fulgidus. The family is related to cell division protein FtsA and heat shock protein DnaK.
Probab=99.95 E-value=2.7e-27 Score=299.76 Aligned_cols=238 Identities=22% Similarity=0.394 Sum_probs=189.0
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEE
Q psy7639 2056 EEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVL 2135 (2568)
Q Consensus 2056 eei~a~iL~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vl 2135 (2568)
+++...+|.++.+.. +..-..+|||||++|++.||+++.+|++.||++++++++||+|||++||+... .+..++
T Consensus 80 ~~~~~~~l~~~~~~~----~~~~~~~vitvP~~~~~~~r~~~~~~~~~ag~~~~~li~ep~aaa~~~g~~~~--~~~~~l 153 (333)
T TIGR00904 80 EKMIKYFIKQVHSRK----SFFKPRIVICVPSGITPVERRAVKESALSAGAREVYLIEEPMAAAIGAGLPVE--EPTGSM 153 (333)
T ss_pred HHHHHHHHHHHhccc----ccCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCCeEEEecCHHHHHHhcCCccc--CCceEE
Confidence 445555555544322 22223899999999999999999999999999999999999999999998643 456799
Q ss_pred EEeeCCeeeEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccC
Q psy7639 2136 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLS 2215 (2568)
Q Consensus 2136 v~DlGggt~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS 2215 (2568)
|||+||||||++++++. | . ...++.++||+|||+.|++|+.++| +.... +.+||++|+.|+
T Consensus 154 VvDiG~gttdvs~v~~~-~-~----~~~~~~~lGG~did~~l~~~l~~~~----~~~~~---------~~~ae~lK~~l~ 214 (333)
T TIGR00904 154 VVDIGGGTTEVAVISLG-G-I----VVSRSIRVGGDEFDEAIINYIRRTY----NLLIG---------EQTAERIKIEIG 214 (333)
T ss_pred EEEcCCCeEEEEEEEeC-C-E----EecCCccchHHHHHHHHHHHHHHHh----cccCC---------HHHHHHHHHHHh
Confidence 99999999999999885 4 2 2346778999999999999988654 32221 357999999997
Q ss_pred Ccce-----eEEEEec--ccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCc-cCc-c-eEEEecCccChHH
Q psy7639 2216 SSTE-----ASIEIDA--LYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDK-SAI-H-DVVLVGGSTRIPK 2285 (2568)
Q Consensus 2216 ~~~~-----~~~~i~~--~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~-~~i-~-~vilvGGstriP~ 2285 (2568)
.... ..+.+.. ...+......|+|++|++++.+.+.++.+.+.++|+.+.... .++ + .|+|+||+|+||.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~i~~~~~~i~~~i~~~l~~~~~~~~~~l~~~~IvL~GGss~ipg 294 (333)
T TIGR00904 215 SAYPLNDEPRKMEVRGRDLVTGLPRTIEITSVEVREALQEPVNQIVEAVKRTLEKTPPELAADIVERGIVLTGGGALLRN 294 (333)
T ss_pred ccccccccccceeecCccccCCCCeEEEECHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhhhccCCEEEECcccchhh
Confidence 6322 2233321 123344567999999999999999999999999999987653 355 3 6999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCcchhHHhhHHHHHHH
Q psy7639 2286 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAI 2319 (2568)
Q Consensus 2286 v~~~l~~~f~~~~~~~~~npdeava~GAa~~aa~ 2319 (2568)
+++.|++.| +.++....||+++||.|||+++..
T Consensus 295 l~e~l~~~~-~~~v~~~~~P~~~va~Ga~~~~~~ 327 (333)
T TIGR00904 295 LDKLLSKET-GLPVIVADDPLLCVAKGTGKALED 327 (333)
T ss_pred HHHHHHHHH-CCCceecCChHHHHHHHHHHHHhC
Confidence 999999999 577788899999999999998754
No 49
>PRK13930 rod shape-determining protein MreB; Provisional
Probab=99.95 E-value=6.3e-27 Score=297.68 Aligned_cols=308 Identities=22% Similarity=0.330 Sum_probs=231.6
Q ss_pred cccccCcccccchhhhccCCCCceeeecccccccccccC--CCceeecHHHHHhHhhCCCchHHhhhhhcCCCCCChhHH
Q psy7639 4 SYIAEGPCAISPAQRRVMRDPGRVVERAALELRVKSLTN--PLSYFTGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQ 81 (2568)
Q Consensus 4 ~~~~~g~~~~~~a~~~~~~~~~~~~e~~~~~~~v~~~~~--~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 81 (2568)
+||||||++++++.. ..+ + ..++.+++.+.. ...++||++|++...+.|.++- ++
T Consensus 11 vgiDlGt~~t~i~~~----~~~--~--~~~~ps~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~--~~------------- 67 (335)
T PRK13930 11 IGIDLGTANTLVYVK----GKG--I--VLNEPSVVAIDTKTGKVLAVGEEAKEMLGRTPGNIE--AI------------- 67 (335)
T ss_pred eEEEcCCCcEEEEEC----CCC--E--EEecCCEEEEECCCCeEEEEcHHHHHhhhcCCCCeE--Ee-------------
Confidence 899999999999874 222 2 234677788754 2357999999998877776632 11
Q ss_pred hhcccCCeEEEecCCCCcEEEEEcCcceeecHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCHHHHHHHHHHHHH
Q psy7639 82 QDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAI 161 (2568)
Q Consensus 82 ~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~speel~a~~L~~l~~~ae~~l~~~~~~~VITVPa~f~~~qr~al~~Aa~~ 161 (2568)
+|+. ++ .+..-+.+..+|+++.+.+..........+|||+|++|+..+|+++.+|++.
T Consensus 68 -----~pi~------~G-----------~i~d~~~~e~ll~~~~~~~~~~~~~~~~~vvit~P~~~~~~~r~~~~~~~e~ 125 (335)
T PRK13930 68 -----RPLK------DG-----------VIADFEATEAMLRYFIKKARGRRFFRKPRIVICVPSGITEVERRAVREAAEH 125 (335)
T ss_pred -----ecCC------CC-----------eEcCHHHHHHHHHHHHHHHhhcccCCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 1210 00 1111234677777777665544444467899999999999999999999999
Q ss_pred cCCcEEEEecchhHHHHhhccccccCCCceEEEEEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHHHHHHHHH
Q psy7639 162 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAE 241 (2568)
Q Consensus 162 AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~ 241 (2568)
+|++.+.+++||+|||++|+... ..+..++|||+||||||++++.. +... ..+...+||.+||+.|.+++.+
T Consensus 126 ~g~~~~~lv~ep~AAa~a~g~~~--~~~~~~lVvDiG~gttdvs~v~~--g~~~----~~~~~~lGG~~id~~l~~~l~~ 197 (335)
T PRK13930 126 AGAREVYLIEEPMAAAIGAGLPV--TEPVGNMVVDIGGGTTEVAVISL--GGIV----YSESIRVAGDEMDEAIVQYVRR 197 (335)
T ss_pred cCCCeEEecccHHHHHHhcCCCc--CCCCceEEEEeCCCeEEEEEEEe--CCEE----eecCcCchhHHHHHHHHHHHHH
Confidence 99999999999999999998753 23456899999999999999976 3222 2455789999999999999877
Q ss_pred HHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCCCCc----eEEEEe--eeccCcceEEeecHHHHHHHHhhhhhhhHHHH
Q psy7639 242 EFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTE----ASIEID--ALYDGIDFYTKISRARFEELCSDLFRSTLQPV 315 (2568)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~~----~~i~i~--~l~~~~d~~~~itR~efe~l~~~l~~~i~~~i 315 (2568)
++. .+. + ...||++|+.++.... ..+.+. .+..+.+..+.|+|++|++++.+.++++.+.+
T Consensus 198 ~~~----~~~--~-------~~~ae~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~i~~~~~~i~~~i 264 (335)
T PRK13930 198 KYN----LLI--G-------ERTAEEIKIEIGSAYPLDEEESMEVRGRDLVTGLPKTIEISSEEVREALAEPLQQIVEAV 264 (335)
T ss_pred HhC----CCC--C-------HHHHHHHHHHhhcCcCCCCCceEEEECccCCCCCCeeEEECHHHHHHHHHHHHHHHHHHH
Confidence 642 211 1 2478999999976432 123332 22334556789999999999999999999999
Q ss_pred HHHHHHcCCCC--CCCCe-EEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHH
Q psy7639 316 EKALQDAKLDK--SAIHD-VVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAIL 378 (2568)
Q Consensus 316 ~~~l~~a~~~~--~~i~~-ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~l 378 (2568)
.++|+.++... ..++. |+|+||+|++|.++++|++.| +.++....+|+++||+|||+.+...
T Consensus 265 ~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipg~~~~l~~~~-~~~v~~~~~p~~ava~Ga~~~~~~~ 329 (335)
T PRK13930 265 KSVLEKTPPELAADIIDRGIVLTGGGALLRGLDKLLSEET-GLPVHIAEDPLTCVARGTGKALENL 329 (335)
T ss_pred HHHHHhCCHHHhhHHHhCCEEEECchhcchhHHHHHHHHH-CCCceecCCHHHHHHHHHHHHHhCh
Confidence 99999876332 23454 999999999999999999999 5677778899999999999998643
No 50
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein.
Probab=99.95 E-value=2.1e-27 Score=283.79 Aligned_cols=204 Identities=23% Similarity=0.346 Sum_probs=176.6
Q ss_pred eeChhhhHHHHHHHHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCc
Q psy7639 2052 TFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGE 2131 (2568)
Q Consensus 2052 ~~~peei~a~iL~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~ 2131 (2568)
....-+..+++|++|++.|+.++|.++.+||||||+||++.||+++.+|++.|||+++++++||+|||++|++.
T Consensus 35 ~I~d~~~~~~~l~~l~~~a~~~~g~~~~~vvisVP~~~~~~~r~a~~~a~~~aGl~~~~li~ep~Aaa~~~~~~------ 108 (239)
T TIGR02529 35 IVVDFLGAVEIVRRLKDTLEQKLGIELTHAATAIPPGTIEGDPKVIVNVIESAGIEVLHVLDEPTAAAAVLQIK------ 108 (239)
T ss_pred eEEEhHHHHHHHHHHHHHHHHHhCCCcCcEEEEECCCCCcccHHHHHHHHHHcCCceEEEeehHHHHHHHhcCC------
Confidence 45566899999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred ceEEEEeeCCeeeEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Q psy7639 2132 RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAK 2211 (2568)
Q Consensus 2132 ~~vlv~DlGggt~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K 2211 (2568)
..+|+|+||||||+++++ +| .++. ..+..+||++||+.|.++ ++++ ..+||++|
T Consensus 109 -~~~vvDiGggtt~i~i~~--~G---~i~~-~~~~~~GG~~it~~Ia~~--------~~i~-----------~~~AE~~K 162 (239)
T TIGR02529 109 -NGAVVDVGGGTTGISILK--KG---KVIY-SADEPTGGTHMSLVLAGA--------YGIS-----------FEEAEEYK 162 (239)
T ss_pred -CcEEEEeCCCcEEEEEEE--CC---eEEE-EEeeecchHHHHHHHHHH--------hCCC-----------HHHHHHHH
Confidence 259999999999999975 46 2333 346779999999876543 3343 26799999
Q ss_pred hccCCcceeEEEEecccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHH
Q psy7639 2212 RTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQ 2291 (2568)
Q Consensus 2212 ~~LS~~~~~~~~i~~~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~ 2291 (2568)
+.++ +++++.++++++++++.+.++++|++. .++.|+|+||++|||.+++.++
T Consensus 163 ~~~~----------------------~~~~~~~~i~~~~~~i~~~i~~~l~~~-----~~~~v~LtGG~a~ipgl~e~l~ 215 (239)
T TIGR02529 163 RGHK----------------------DEEEIFPVVKPVYQKMASIVKRHIEGQ-----GVKDLYLVGGACSFSGFADVFE 215 (239)
T ss_pred HhcC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEECchhcchhHHHHHH
Confidence 8764 246678899999999999999999864 4578999999999999999999
Q ss_pred HhcCCCCCCCCCCcchhHHhhHHH
Q psy7639 2292 NFFCGKSLNLSINPDEAVAYGAAV 2315 (2568)
Q Consensus 2292 ~~f~~~~~~~~~npdeava~GAa~ 2315 (2568)
+.| +.++....||+++||+|||+
T Consensus 216 ~~l-g~~v~~~~~P~~~va~Gaa~ 238 (239)
T TIGR02529 216 KQL-GLNVIKPQHPLYVTPLGIAM 238 (239)
T ss_pred HHh-CCCcccCCCCCeehhheeec
Confidence 999 56777889999999999986
No 51
>PRK13930 rod shape-determining protein MreB; Provisional
Probab=99.95 E-value=2.1e-26 Score=292.90 Aligned_cols=242 Identities=23% Similarity=0.366 Sum_probs=194.0
Q ss_pred hHHHHHHHHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEE
Q psy7639 2058 ISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIF 2137 (2568)
Q Consensus 2058 i~a~iL~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~ 2137 (2568)
.+..+|+++.+.+....+.....+|||||++|++.||+++.+|++.||++++.+++||+|||++||+... .+..++||
T Consensus 80 ~~e~ll~~~~~~~~~~~~~~~~~vvit~P~~~~~~~r~~~~~~~e~~g~~~~~lv~ep~AAa~a~g~~~~--~~~~~lVv 157 (335)
T PRK13930 80 ATEAMLRYFIKKARGRRFFRKPRIVICVPSGITEVERRAVREAAEHAGAREVYLIEEPMAAAIGAGLPVT--EPVGNMVV 157 (335)
T ss_pred HHHHHHHHHHHHHhhcccCCCCcEEEEECCCCCHHHHHHHHHHHHHcCCCeEEecccHHHHHHhcCCCcC--CCCceEEE
Confidence 4555666665544444455577999999999999999999999999999999999999999999998643 34568999
Q ss_pred eeCCeeeEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCc
Q psy7639 2138 DLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSS 2217 (2568)
Q Consensus 2138 DlGggt~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~ 2217 (2568)
|+||||||++++... + .+ ..++..+||.|||+.|.+|+.++ ++.++. ...||++|+.|+..
T Consensus 158 DiG~gttdvs~v~~g-~-~~----~~~~~~lGG~~id~~l~~~l~~~----~~~~~~---------~~~ae~~K~~~~~~ 218 (335)
T PRK13930 158 DIGGGTTEVAVISLG-G-IV----YSESIRVAGDEMDEAIVQYVRRK----YNLLIG---------ERTAEEIKIEIGSA 218 (335)
T ss_pred EeCCCeEEEEEEEeC-C-EE----eecCcCchhHHHHHHHHHHHHHH----hCCCCC---------HHHHHHHHHHhhcC
Confidence 999999999999863 2 22 35678999999999999998765 343322 24789999999864
Q ss_pred ce----eEEEEe--cccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCC--ccCcce-EEEecCccChHHHHH
Q psy7639 2218 TE----ASIEID--ALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLD--KSAIHD-VVLVGGSTRIPKVQS 2288 (2568)
Q Consensus 2218 ~~----~~~~i~--~~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~--~~~i~~-vilvGGstriP~v~~ 2288 (2568)
.. ..+.+. .+..+.+....|+|++|++++.++++++.+.+.++|+.+... .+.++. |+|+||+|+||.+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipg~~~ 298 (335)
T PRK13930 219 YPLDEEESMEVRGRDLVTGLPKTIEISSEEVREALAEPLQQIVEAVKSVLEKTPPELAADIIDRGIVLTGGGALLRGLDK 298 (335)
T ss_pred cCCCCCceEEEECccCCCCCCeeEEECHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhHHHhCCEEEECchhcchhHHH
Confidence 32 123332 334556678899999999999999999999999999987643 344565 999999999999999
Q ss_pred HHHHhcCCCCCCCCCCcchhHHhhHHHHHHHhh
Q psy7639 2289 LLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 2321 (2568)
Q Consensus 2289 ~l~~~f~~~~~~~~~npdeava~GAa~~aa~ls 2321 (2568)
.|++.|+ .++....||++|||+|||+.+....
T Consensus 299 ~l~~~~~-~~v~~~~~p~~ava~Ga~~~~~~~~ 330 (335)
T PRK13930 299 LLSEETG-LPVHIAEDPLTCVARGTGKALENLD 330 (335)
T ss_pred HHHHHHC-CCceecCCHHHHHHHHHHHHHhChH
Confidence 9999994 5666778999999999999987544
No 52
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes. In addition to individual cell shape, the way in which groups of cells are arranged is also typical of some bacterial species, especially Gram-positive coccoids. For many years, it was believed that micro-organisms with other than spheroidal cell shapes maintained morphology by means of their external cell walls. Recently, however, studies of the Gram-positive rod Bacillus subtilis have revealed two related genes that are essential for the integrity of cell morphogenesis []. Termed mreB and mbl, the gene products localise close to the cell surface, forming filamentous helical structures. Many homologues have been found in diverse bacterial groups, suggesting a common ancestor []. The crystal structure of MreB from Thermotoga maritima has been resolved using X-ray crystallography []. It consists of 19 beta-strands and 15 alpha- helices, and shows remarkable structural similarity to eukaryotic actin. MreB crystals also contain proto-filaments, with individual proteins assembling into polymers like F-actin, in the same orientation. It is hypothesised therefore, that MreB was the forerunner of actin in early eukaryotes [].; GO: 0000902 cell morphogenesis; PDB: 1JCF_A 1JCE_A 2WUS_A 1JCG_A.
Probab=99.93 E-value=4.8e-25 Score=270.10 Aligned_cols=307 Identities=24% Similarity=0.347 Sum_probs=221.6
Q ss_pred cccccccCcccccchhhhccCCCCceeeecccccccccccCC--CceeecHHHHHhHhhCCCchHHhhhhhcCCCCCChh
Q psy7639 2 KESYIAEGPCAISPAQRRVMRDPGRVVERAALELRVKSLTNP--LSYFTGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPK 79 (2568)
Q Consensus 2 ~~~~~~~g~~~~~~a~~~~~~~~~~~~e~~~~~~~v~~~~~~--~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 79 (2568)
+..||||||+++.+... -+.+..++.+++.++.. .-..+|++|+.+..+.|.+...
T Consensus 2 ~~igIDLGT~~t~i~~~--------~~Giv~~epSvVA~~~~~~~i~avG~~A~~m~gktp~~i~~-------------- 59 (326)
T PF06723_consen 2 KDIGIDLGTSNTRIYVK--------GKGIVLNEPSVVAYDKDTGKILAVGDEAKAMLGKTPDNIEV-------------- 59 (326)
T ss_dssp SEEEEEE-SSEEEEEET--------TTEEEEEEES-EEEETTT--EEEESHHHHTTTTS-GTTEEE--------------
T ss_pred CceEEecCcccEEEEEC--------CCCEEEecCcEEEEECCCCeEEEEhHHHHHHhhcCCCccEE--------------
Confidence 46899999999988432 25677888999988654 3446899999888877776311
Q ss_pred HHhhcccCCeEEEecCCCCcEEEEEcCcceeecHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCHHHHHHHHHHH
Q psy7639 80 IQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG 159 (2568)
Q Consensus 80 v~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~speel~a~~L~~l~~~ae~~l~~~~~~~VITVPa~f~~~qr~al~~Aa 159 (2568)
.+|.. + ..+.=-++...+|+++.+.+.......-..++|+||+.-|+.+|+++.+|+
T Consensus 60 ------~~Pl~--------------~---GvI~D~~~~~~~l~~~l~k~~~~~~~~~p~vvi~vP~~~T~verrA~~~a~ 116 (326)
T PF06723_consen 60 ------VRPLK--------------D---GVIADYEAAEEMLRYFLKKALGRRSFFRPRVVICVPSGITEVERRALIDAA 116 (326)
T ss_dssp ------E-SEE--------------T---TEESSHHHHHHHHHHHHHHHHTSS-SS--EEEEEE-SS--HHHHHHHHHHH
T ss_pred ------Ecccc--------------C---CcccCHHHHHHHHHHHHHHhccCCCCCCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 12211 0 112223567778888887776532334568999999999999999999999
Q ss_pred HHcCCcEEEEecchhHHHHhhccccccCCCceEEEEEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHHHHHHH
Q psy7639 160 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL 239 (2568)
Q Consensus 160 ~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l 239 (2568)
..||.+.+.|++||.|||+..+++ ...+...||+|+||||||++++.. |....-.+ ...||++||++|.+|+
T Consensus 117 ~~aGa~~V~li~ep~AaAiGaGl~--i~~~~g~miVDIG~GtTdiavisl--ggiv~s~s----i~~gG~~~DeaI~~~i 188 (326)
T PF06723_consen 117 RQAGARKVYLIEEPIAAAIGAGLD--IFEPRGSMIVDIGGGTTDIAVISL--GGIVASRS----IRIGGDDIDEAIIRYI 188 (326)
T ss_dssp HHTT-SEEEEEEHHHHHHHHTT----TTSSS-EEEEEE-SS-EEEEEEET--TEEEEEEE----ES-SHHHHHHHHHHHH
T ss_pred HHcCCCEEEEecchHHHHhcCCCC--CCCCCceEEEEECCCeEEEEEEEC--CCEEEEEE----EEecCcchhHHHHHHH
Confidence 999999999999999999999877 456788999999999999999975 43322222 5789999999999999
Q ss_pred HHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCCCC----ceEEEE--eeeccCcceEEeecHHHHHHHHhhhhhhhHH
Q psy7639 240 AEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSST----EASIEI--DALYDGIDFYTKISRARFEELCSDLFRSTLQ 313 (2568)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~----~~~i~i--~~l~~~~d~~~~itR~efe~l~~~l~~~i~~ 313 (2568)
.+++. . ... ...||++|+.++.-. ...+.+ -.+..|.+..+.|+-+++.+.+.+.+.++.+
T Consensus 189 r~~y~----l--~Ig-------~~tAE~iK~~~g~~~~~~~~~~~~v~Grd~~tGlP~~~~i~~~ev~~ai~~~~~~I~~ 255 (326)
T PF06723_consen 189 REKYN----L--LIG-------ERTAEKIKIEIGSASPPEEEESMEVRGRDLITGLPKSIEITSSEVREAIEPPVDQIVE 255 (326)
T ss_dssp HHHHS----E--E---------HHHHHHHHHHH-BSS--HHHHEEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred HHhhC----c--ccC-------HHHHHHHHHhcceeeccCCCceEEEECccccCCCcEEEEEcHHHHHHHHHHHHHHHHH
Confidence 88774 1 111 347899999987532 223444 3456788899999999999999999999999
Q ss_pred HHHHHHHHcCCCCC-C--CCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHH
Q psy7639 314 PVEKALQDAKLDKS-A--IHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQA 375 (2568)
Q Consensus 314 ~i~~~l~~a~~~~~-~--i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~a 375 (2568)
.|+++|+....... | -+.|+|+||+++++.+.++|++.+ +.++....||..|||.||....
T Consensus 256 ~i~~~Le~~pPel~~DI~~~GI~LtGGga~l~Gl~~~i~~~~-~~pV~va~~P~~~va~G~~~~l 319 (326)
T PF06723_consen 256 AIKEVLEKTPPELAADILENGIVLTGGGALLRGLDEYISEET-GVPVRVADDPLTAVARGAGKLL 319 (326)
T ss_dssp HHHHHHHTS-HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHH-SS-EEE-SSTTTHHHHHHHHTT
T ss_pred HHHHHHHhCCHHHHHHHHHCCEEEEChhhhhccHHHHHHHHH-CCCEEEcCCHHHHHHHHHHHHH
Confidence 99999998764321 3 246999999999999999999999 7899999999999999998654
No 53
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein.
Probab=99.93 E-value=9.8e-25 Score=260.85 Aligned_cols=204 Identities=23% Similarity=0.335 Sum_probs=175.4
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCceEEEEechhHHHHHhhccccccCc
Q psy7639 1479 TFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGE 1558 (2568)
Q Consensus 1479 ~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~v~~li~EPtAAal~y~~~~~~~~~ 1558 (2568)
.+.-.+..+++|++|++.++.++|.++.++|||||++|++.||+++++|++.|||++..+++||.|||++|+..
T Consensus 35 ~I~d~~~~~~~l~~l~~~a~~~~g~~~~~vvisVP~~~~~~~r~a~~~a~~~aGl~~~~li~ep~Aaa~~~~~~------ 108 (239)
T TIGR02529 35 IVVDFLGAVEIVRRLKDTLEQKLGIELTHAATAIPPGTIEGDPKVIVNVIESAGIEVLHVLDEPTAAAAVLQIK------ 108 (239)
T ss_pred eEEEhHHHHHHHHHHHHHHHHHhCCCcCcEEEEECCCCCcccHHHHHHHHHHcCCceEEEeehHHHHHHHhcCC------
Confidence 34457888999999999999999999999999999999999999999999999999999999999999998643
Q ss_pred ceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhh
Q psy7639 1559 RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAK 1638 (2568)
Q Consensus 1559 ~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK 1638 (2568)
..+|+|+||||+|+++++ .| .++.+. +..+||.+||+.|++.+ +++ +.+||++|
T Consensus 109 -~~~vvDiGggtt~i~i~~--~G---~i~~~~-~~~~GG~~it~~Ia~~~--------~i~-----------~~~AE~~K 162 (239)
T TIGR02529 109 -NGAVVDVGGGTTGISILK--KG---KVIYSA-DEPTGGTHMSLVLAGAY--------GIS-----------FEEAEEYK 162 (239)
T ss_pred -CcEEEEeCCCcEEEEEEE--CC---eEEEEE-eeecchHHHHHHHHHHh--------CCC-----------HHHHHHHH
Confidence 259999999999999987 56 334443 45599999999987663 222 26889999
Q ss_pred cccCCCCeeEEEEccccCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHH
Q psy7639 1639 RTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQ 1718 (2568)
Q Consensus 1639 ~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~ 1718 (2568)
+.++ +.+++.++++|+++++...+++.|++.+ ++.|+|+||+|++|.++++++
T Consensus 163 ~~~~----------------------~~~~~~~~i~~~~~~i~~~i~~~l~~~~-----~~~v~LtGG~a~ipgl~e~l~ 215 (239)
T TIGR02529 163 RGHK----------------------DEEEIFPVVKPVYQKMASIVKRHIEGQG-----VKDLYLVGGACSFSGFADVFE 215 (239)
T ss_pred HhcC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCEEEEECchhcchhHHHHHH
Confidence 8753 2456788999999999999999998653 568999999999999999999
Q ss_pred hhhcCCcccccCCchhhhhccHHH
Q psy7639 1719 NFFCGKSLNLSINPDEAVAYGAAV 1742 (2568)
Q Consensus 1719 ~~f~~~~v~~~~nP~eAVA~GAai 1742 (2568)
+.| +.++..+.||+++||+|||+
T Consensus 216 ~~l-g~~v~~~~~P~~~va~Gaa~ 238 (239)
T TIGR02529 216 KQL-GLNVIKPQHPLYVTPLGIAM 238 (239)
T ss_pred HHh-CCCcccCCCCCeehhheeec
Confidence 999 56778889999999999985
No 54
>PRK15080 ethanolamine utilization protein EutJ; Provisional
Probab=99.91 E-value=2e-23 Score=254.08 Aligned_cols=202 Identities=25% Similarity=0.372 Sum_probs=177.2
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEE
Q psy7639 2056 EEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVL 2135 (2568)
Q Consensus 2056 eei~a~iL~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vl 2135 (2568)
-+.....|+++++.|+.++|.++..++++||++|+..||+++.+|++.|||++.++++||+|++.+|++. ..+
T Consensus 66 i~~a~~~i~~~~~~ae~~~g~~i~~v~~~vp~~~~~~~~~~~~~~~~~aGl~~~~ii~e~~A~a~~~~~~-------~~~ 138 (267)
T PRK15080 66 FIGAVTIVRRLKATLEEKLGRELTHAATAIPPGTSEGDPRAIINVVESAGLEVTHVLDEPTAAAAVLGID-------NGA 138 (267)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcCeEEEEeCCCCCchhHHHHHHHHHHcCCceEEEechHHHHHHHhCCC-------CcE
Confidence 6778889999999999999999999999999999999999999999999999999999999999999763 158
Q ss_pred EEeeCCeeeEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccC
Q psy7639 2136 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLS 2215 (2568)
Q Consensus 2136 v~DlGggt~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS 2215 (2568)
++|+||||||++++. +| . ++.+ ++..+||++||+.|.+++ +++ +.+||++|+.++
T Consensus 139 vvDIGggtt~i~v~~--~g-~--~~~~-~~~~~GG~~it~~Ia~~l--------~i~-----------~~eAE~lK~~~~ 193 (267)
T PRK15080 139 VVDIGGGTTGISILK--DG-K--VVYS-ADEPTGGTHMSLVLAGAY--------GIS-----------FEEAEQYKRDPK 193 (267)
T ss_pred EEEeCCCcEEEEEEE--CC-e--EEEE-ecccCchHHHHHHHHHHh--------CCC-----------HHHHHHHHhccC
Confidence 999999999999964 56 2 2333 578999999999988765 222 367899998763
Q ss_pred CcceeEEEEecccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcC
Q psy7639 2216 SSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFC 2295 (2568)
Q Consensus 2216 ~~~~~~~~i~~~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~ 2295 (2568)
++++++++++++++++.+.+++.|++. +++.|+|+||++|||.+++.+++.|
T Consensus 194 ----------------------~~~~~~~ii~~~~~~i~~~i~~~l~~~-----~~~~IvLtGG~s~lpgl~e~l~~~l- 245 (267)
T PRK15080 194 ----------------------HHKEIFPVVKPVVEKMASIVARHIEGQ-----DVEDIYLVGGTCCLPGFEEVFEKQT- 245 (267)
T ss_pred ----------------------CHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEECCcccchhHHHHHHHHh-
Confidence 367899999999999999999999864 7789999999999999999999999
Q ss_pred CCCCCCCCCcchhHHhhHHHHH
Q psy7639 2296 GKSLNLSINPDEAVAYGAAVQA 2317 (2568)
Q Consensus 2296 ~~~~~~~~npdeava~GAa~~a 2317 (2568)
+.++....||+.++|+|||++|
T Consensus 246 g~~v~~~~~P~~~~a~Gaa~~~ 267 (267)
T PRK15080 246 GLPVHKPQHPLFVTPLGIALSC 267 (267)
T ss_pred CCCcccCCCchHHHHHHHHhhC
Confidence 6777788999999999999864
No 55
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning]
Probab=99.91 E-value=4.9e-23 Score=239.55 Aligned_cols=310 Identities=22% Similarity=0.333 Sum_probs=243.2
Q ss_pred ccccccCcccccchhhhccCCCCceeeecccccccccccC--CC--ceeecHHHHHhHhhCCCchHHhhhhhcCCCCCCh
Q psy7639 3 ESYIAEGPCAISPAQRRVMRDPGRVVERAALELRVKSLTN--PL--SYFTGDAAKNQVAMNPKNTVFDAKRLIGRKFDDP 78 (2568)
Q Consensus 3 ~~~~~~g~~~~~~a~~~~~~~~~~~~e~~~~~~~v~~~~~--~~--~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 78 (2568)
.+|||+||+|+.+... -+.+..++.||+.+.. .. -..||.+|++...+.|.|...- |+..|
T Consensus 8 diGIDLGTanTlV~~k--------~kgIVl~ePSVVAi~~~~~~~~v~aVG~eAK~MlGrTP~ni~ai------RPmkd- 72 (342)
T COG1077 8 DIGIDLGTANTLVYVK--------GKGIVLNEPSVVAIESEGKTKVVLAVGEEAKQMLGRTPGNIVAI------RPMKD- 72 (342)
T ss_pred cceeeecccceEEEEc--------CceEEecCceEEEEeecCCCceEEEehHHHHHHhccCCCCceEE------eecCC-
Confidence 5799999999988754 4678889999999965 22 3479999999888888874221 11111
Q ss_pred hHHhhcccCCeEEEecCCCCcEEEEEcCcceeecHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEecCCCCHHHHHHHHH
Q psy7639 79 KIQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLG-HSVRDAVITVPAYFNDAQRQATKD 157 (2568)
Q Consensus 79 ~v~~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~speel~a~~L~~l~~~ae~~l~-~~~~~~VITVPa~f~~~qr~al~~ 157 (2568)
..+.--++...+|+|+.+.+-..-+ .....++|+||..-++.+|+|+++
T Consensus 73 ------------------------------GVIAd~~~te~ml~~fik~~~~~~~~~~~prI~i~vP~g~T~VErrAi~e 122 (342)
T COG1077 73 ------------------------------GVIADFEVTELMLKYFIKKVHKNGSSFPKPRIVICVPSGITDVERRAIKE 122 (342)
T ss_pred ------------------------------cEeecHHHHHHHHHHHHHHhccCCCCCCCCcEEEEecCCccHHHHHHHHH
Confidence 1233345777788888887764333 445579999999999999999999
Q ss_pred HHHHcCCcEEEEecchhHHHHhhccccccCCCceEEEEEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHHHHH
Q psy7639 158 AGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVS 237 (2568)
Q Consensus 158 Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~ 237 (2568)
|++.||.+.+.+++||.|||+..++. ...+..-||||+||||||++++.+. ... ... ...+||+.||+.+.+
T Consensus 123 a~~~aGa~~V~lieEp~aAAIGaglp--i~ep~G~mvvDIGgGTTevaVISlg--giv---~~~-Sirv~GD~~De~Ii~ 194 (342)
T COG1077 123 AAESAGAREVYLIEEPMAAAIGAGLP--IMEPTGSMVVDIGGGTTEVAVISLG--GIV---SSS-SVRVGGDKMDEAIIV 194 (342)
T ss_pred HHHhccCceEEEeccHHHHHhcCCCc--ccCCCCCEEEEeCCCceeEEEEEec--CEE---EEe-eEEEecchhhHHHHH
Confidence 99999999999999999999988766 4556678999999999999999873 221 111 257899999999999
Q ss_pred HHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCCC--------CceEEEEeeeccCcceEEeecHHHHHHHHhhhhh
Q psy7639 238 HLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSS--------TEASIEIDALYDGIDFYTKISRARFEELCSDLFR 309 (2568)
Q Consensus 238 ~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~--------~~~~i~i~~l~~~~d~~~~itR~efe~l~~~l~~ 309 (2568)
|+.+++. +....+ .+|++|+..... .+..+.-..+..|.+-.++++-+++.+.+++.+.
T Consensus 195 yvr~~~n------l~IGe~-------taE~iK~eiG~a~~~~~~~~~~~eV~Grdl~~GlPk~i~i~s~ev~eal~~~v~ 261 (342)
T COG1077 195 YVRKKYN------LLIGER-------TAEKIKIEIGSAYPEEEDEELEMEVRGRDLVTGLPKTITINSEEIAEALEEPLN 261 (342)
T ss_pred HHHHHhC------eeecHH-------HHHHHHHHhcccccccCCccceeeEEeeecccCCCeeEEEcHHHHHHHHHHHHH
Confidence 9988775 222222 477888776442 2244555667778888999999999999999999
Q ss_pred hhHHHHHHHHHHcCCCC--CCCCe-EEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHc
Q psy7639 310 STLQPVEKALQDAKLDK--SAIHD-VVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 379 (2568)
Q Consensus 310 ~i~~~i~~~l~~a~~~~--~~i~~-ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls 379 (2568)
++.+.++..|+..+... +-++. ++|+||+|-+..+.+.|++.. +.++....+|-.|||.|+......+.
T Consensus 262 ~Iveair~~Le~tpPeL~~DI~ergivltGGGalLrglD~~i~~et-~~pv~ia~~pL~~Va~G~G~~le~~~ 333 (342)
T COG1077 262 GIVEAIRLVLEKTPPELAADIVERGIVLTGGGALLRGLDRLLSEET-GVPVIIADDPLTCVAKGTGKALEALD 333 (342)
T ss_pred HHHHHHHHHHhhCCchhcccHhhCceEEecchHHhcCchHhHHhcc-CCeEEECCChHHHHHhccchhhhhhH
Confidence 99999999999976432 22555 999999999999999999987 77888889999999999998887653
No 56
>PRK15080 ethanolamine utilization protein EutJ; Provisional
Probab=99.88 E-value=1e-21 Score=239.06 Aligned_cols=202 Identities=24% Similarity=0.372 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCceEEEEechhHHHHHhhccccccCcceEE
Q psy7639 1483 EEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVL 1562 (2568)
Q Consensus 1483 ~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~v~~li~EPtAAal~y~~~~~~~~~~~vl 1562 (2568)
.+.....|+++++.++.++|.++..++++||++|+..+|+++++|++.|||++..+++||+|++.+|..+. .+
T Consensus 66 i~~a~~~i~~~~~~ae~~~g~~i~~v~~~vp~~~~~~~~~~~~~~~~~aGl~~~~ii~e~~A~a~~~~~~~-------~~ 138 (267)
T PRK15080 66 FIGAVTIVRRLKATLEEKLGRELTHAATAIPPGTSEGDPRAIINVVESAGLEVTHVLDEPTAAAAVLGIDN-------GA 138 (267)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcCeEEEEeCCCCCchhHHHHHHHHHHcCCceEEEechHHHHHHHhCCCC-------cE
Confidence 67778899999999999999999999999999999999999999999999999999999999999886421 59
Q ss_pred EEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhcccC
Q psy7639 1563 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLS 1642 (2568)
Q Consensus 1563 V~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls 1642 (2568)
|+|+||||+|+++++ +|. +..+ ++..+||.+||+.|++++. .+ +.+||+.|+.++
T Consensus 139 vvDIGggtt~i~v~~--~g~---~~~~-~~~~~GG~~it~~Ia~~l~--------i~-----------~~eAE~lK~~~~ 193 (267)
T PRK15080 139 VVDIGGGTTGISILK--DGK---VVYS-ADEPTGGTHMSLVLAGAYG--------IS-----------FEEAEQYKRDPK 193 (267)
T ss_pred EEEeCCCcEEEEEEE--CCe---EEEE-ecccCchHHHHHHHHHHhC--------CC-----------HHHHHHHHhccC
Confidence 999999999999987 663 3333 4567999999999998742 11 357899888752
Q ss_pred CCCeeEEEEccccCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhc
Q psy7639 1643 SSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFC 1722 (2568)
Q Consensus 1643 ~~~~~~i~i~~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~ 1722 (2568)
+++++.++++|+++++.+.+++.|+.. .++.|+|+||+|++|.+++++++.|
T Consensus 194 ----------------------~~~~~~~ii~~~~~~i~~~i~~~l~~~-----~~~~IvLtGG~s~lpgl~e~l~~~l- 245 (267)
T PRK15080 194 ----------------------HHKEIFPVVKPVVEKMASIVARHIEGQ-----DVEDIYLVGGTCCLPGFEEVFEKQT- 245 (267)
T ss_pred ----------------------CHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEECCcccchhHHHHHHHHh-
Confidence 357889999999999999999999864 4788999999999999999999999
Q ss_pred CCcccccCCchhhhhccHHHHH
Q psy7639 1723 GKSLNLSINPDEAVAYGAAVQA 1744 (2568)
Q Consensus 1723 ~~~v~~~~nP~eAVA~GAai~a 1744 (2568)
+.++....||+.++|+|||+++
T Consensus 246 g~~v~~~~~P~~~~a~Gaa~~~ 267 (267)
T PRK15080 246 GLPVHKPQHPLFVTPLGIALSC 267 (267)
T ss_pred CCCcccCCCchHHHHHHHHhhC
Confidence 5678888999999999999874
No 57
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes. In addition to individual cell shape, the way in which groups of cells are arranged is also typical of some bacterial species, especially Gram-positive coccoids. For many years, it was believed that micro-organisms with other than spheroidal cell shapes maintained morphology by means of their external cell walls. Recently, however, studies of the Gram-positive rod Bacillus subtilis have revealed two related genes that are essential for the integrity of cell morphogenesis []. Termed mreB and mbl, the gene products localise close to the cell surface, forming filamentous helical structures. Many homologues have been found in diverse bacterial groups, suggesting a common ancestor []. The crystal structure of MreB from Thermotoga maritima has been resolved using X-ray crystallography []. It consists of 19 beta-strands and 15 alpha- helices, and shows remarkable structural similarity to eukaryotic actin. MreB crystals also contain proto-filaments, with individual proteins assembling into polymers like F-actin, in the same orientation. It is hypothesised therefore, that MreB was the forerunner of actin in early eukaryotes [].; GO: 0000902 cell morphogenesis; PDB: 1JCF_A 1JCE_A 2WUS_A 1JCG_A.
Probab=99.86 E-value=4.8e-21 Score=235.09 Aligned_cols=296 Identities=25% Similarity=0.369 Sum_probs=204.3
Q ss_pred HhcccccEEEEEEcccccccccCCcccccccccchh------hhhHHHHhhhcCCCccccccccccccccCChhhhhccc
Q psy7639 1381 RISARNNLEAYVFNVKQALDNAGNKLTESEKSRCRE------ECDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMK 1454 (2568)
Q Consensus 1381 ~lGttns~~a~~~~~~~~~n~~g~~~tPS~v~~~~~------~G~~A~~~~~~~p~~tv~~~k~~ig~~~~d~~~~~~~k 1454 (2568)
.|||.|+.+ |..+.+..++. ||+|++++. +|++|+......|.+..
T Consensus 7 DLGT~~t~i-~~~~~Giv~~e------pSvVA~~~~~~~i~avG~~A~~m~gktp~~i~--------------------- 58 (326)
T PF06723_consen 7 DLGTSNTRI-YVKGKGIVLNE------PSVVAYDKDTGKILAVGDEAKAMLGKTPDNIE--------------------- 58 (326)
T ss_dssp EE-SSEEEE-EETTTEEEEEE------ES-EEEETTT--EEEESHHHHTTTTS-GTTEE---------------------
T ss_pred ecCcccEEE-EECCCCEEEec------CcEEEEECCCCeEEEEhHHHHHHhhcCCCccE---------------------
Confidence 589999877 33332223233 999999754 39999766554444321
Q ss_pred ccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCc
Q psy7639 1455 HWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLN 1534 (2568)
Q Consensus 1455 ~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~ 1534 (2568)
++.+-.+. ...=-++...+|+++.+.+.......-..++|+||+.-++-+|+++.+|+..||..
T Consensus 59 -----~~~Pl~~G-----------vI~D~~~~~~~l~~~l~k~~~~~~~~~p~vvi~vP~~~T~verrA~~~a~~~aGa~ 122 (326)
T PF06723_consen 59 -----VVRPLKDG-----------VIADYEAAEEMLRYFLKKALGRRSFFRPRVVICVPSGITEVERRALIDAARQAGAR 122 (326)
T ss_dssp -----EE-SEETT-----------EESSHHHHHHHHHHHHHHHHTSS-SS--EEEEEE-SS--HHHHHHHHHHHHHTT-S
T ss_pred -----EEccccCC-----------cccCHHHHHHHHHHHHHHhccCCCCCCCeEEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 11110001 11114566777888877775543345678999999999999999999999999999
Q ss_pred eEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHh
Q psy7639 1535 VMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKR 1614 (2568)
Q Consensus 1535 v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~ 1614 (2568)
.+.++.||.|||+..+.+- ......||+|+||||+|++++.+ |.++ .+.. ...||.+||+.|.+|+.+++.
T Consensus 123 ~V~li~ep~AaAiGaGl~i--~~~~g~miVDIG~GtTdiavisl--ggiv---~s~s-i~~gG~~~DeaI~~~ir~~y~- 193 (326)
T PF06723_consen 123 KVYLIEEPIAAAIGAGLDI--FEPRGSMIVDIGGGTTDIAVISL--GGIV---ASRS-IRIGGDDIDEAIIRYIREKYN- 193 (326)
T ss_dssp EEEEEEHHHHHHHHTT--T--TSSS-EEEEEE-SS-EEEEEEET--TEEE---EEEE-ES-SHHHHHHHHHHHHHHHHS-
T ss_pred EEEEecchHHHHhcCCCCC--CCCCceEEEEECCCeEEEEEEEC--CCEE---EEEE-EEecCcchhHHHHHHHHHhhC-
Confidence 9999999999999998865 34566899999999999999984 4232 2222 357999999999999877653
Q ss_pred hhcCCCCCCHHHHHHHHHHHHHhhcccCCCC----eeEEEEc--cccCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHH
Q psy7639 1615 KYKKDMSVNPRALRRLRTAAERAKRTLSSST----EASIEID--ALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKAL 1688 (2568)
Q Consensus 1615 ~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~----~~~i~i~--~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L 1688 (2568)
..+ . ...||+.|+.++... ...+.+. ...+|....+.|+.+++.+.+++.+.++.+.|+++|
T Consensus 194 ---l~I--g-------~~tAE~iK~~~g~~~~~~~~~~~~v~Grd~~tGlP~~~~i~~~ev~~ai~~~~~~I~~~i~~~L 261 (326)
T PF06723_consen 194 ---LLI--G-------ERTAEKIKIEIGSASPPEEEESMEVRGRDLITGLPKSIEITSSEVREAIEPPVDQIVEAIKEVL 261 (326)
T ss_dssp ---EE-----------HHHHHHHHHHH-BSS--HHHHEEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---ccc--C-------HHHHHHHHHhcceeeccCCCceEEEECccccCCCcEEEEEcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 1 247889998887532 2344443 345777788999999999999999999999999999
Q ss_pred HHcCCCCc---cc--cEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHH
Q psy7639 1689 QDAKLDKS---AI--HDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQA 1744 (2568)
Q Consensus 1689 ~~a~~~~~---~I--d~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a 1744 (2568)
++. +++ || +.|+|+||+++++.+.++|++.+ +-++....+|..+||.||....
T Consensus 262 e~~--pPel~~DI~~~GI~LtGGga~l~Gl~~~i~~~~-~~pV~va~~P~~~va~G~~~~l 319 (326)
T PF06723_consen 262 EKT--PPELAADILENGIVLTGGGALLRGLDEYISEET-GVPVRVADDPLTAVARGAGKLL 319 (326)
T ss_dssp HTS---HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHH-SS-EEE-SSTTTHHHHHHHHTT
T ss_pred HhC--CHHHHHHHHHCCEEEEChhhhhccHHHHHHHHH-CCCEEEcCCHHHHHHHHHHHHH
Confidence 975 332 33 46999999999999999999999 5788889999999999998653
No 58
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning]
Probab=99.79 E-value=8e-18 Score=196.50 Aligned_cols=247 Identities=22% Similarity=0.392 Sum_probs=196.5
Q ss_pred eCHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEEEcCCCCHHHHHHHHHHHHHcCCCeeeecchhHHHHHHhccccCCCCC
Q psy7639 684 FAPEEISSMVLTKMKETAEAYLG-HSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGE 762 (2568)
Q Consensus 684 ~speev~a~iL~~L~~~ae~~~~-~~~~~~VITVPa~f~~~qr~al~~Aa~~AGl~~l~li~Ep~AAAl~y~~~~~~~~~ 762 (2568)
+.--++...+|+++.+.+....+ .....++|+||..-++-+|+|+++|++.||.+.+.++.||.|||+..++. ...+
T Consensus 75 IAd~~~te~ml~~fik~~~~~~~~~~~prI~i~vP~g~T~VErrAi~ea~~~aGa~~V~lieEp~aAAIGaglp--i~ep 152 (342)
T COG1077 75 IADFEVTELMLKYFIKKVHKNGSSFPKPRIVICVPSGITDVERRAIKEAAESAGAREVYLIEEPMAAAIGAGLP--IMEP 152 (342)
T ss_pred eecHHHHHHHHHHHHHHhccCCCCCCCCcEEEEecCCccHHHHHHHHHHHHhccCceEEEeccHHHHHhcCCCc--ccCC
Confidence 33346777888888887754333 44557999999999999999999999999999999999999999987654 3344
Q ss_pred ceEEEEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHH
Q psy7639 763 RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAK 842 (2568)
Q Consensus 763 ~~vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK 842 (2568)
..-||||+||||+|++++.+. | ...- ....+||+.||+.+++|+.++|+ +....+ .+|++|
T Consensus 153 ~G~mvvDIGgGTTevaVISlg-g-iv~~----~Sirv~GD~~De~Ii~yvr~~~n------l~IGe~-------taE~iK 213 (342)
T COG1077 153 TGSMVVDIGGGTTEVAVISLG-G-IVSS----SSVRVGGDKMDEAIIVYVRKKYN------LLIGER-------TAEKIK 213 (342)
T ss_pred CCCEEEEeCCCceeEEEEEec-C-EEEE----eeEEEecchhhHHHHHHHHHHhC------eeecHH-------HHHHHH
Confidence 567999999999999999873 2 2221 12568999999999999998876 222222 477777
Q ss_pred HhcCCC--------CcceeeeccccCCcceEEecchHhHHHHHHHHHHhHHHHHHHHHHHccCC--ccCcCe-EEEEcCC
Q psy7639 843 RTLSSS--------TEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLD--KSAIHD-VVLVGGS 911 (2568)
Q Consensus 843 ~~LS~~--------~~~~i~i~~l~~~~d~~~~itr~efe~l~~~l~~~i~~~i~~~L~~a~~~--~~~I~~-ViLvGGs 911 (2568)
+..... .+.++.-.++..|..-.++++-.+..+.+++.+++|.+.++..|+..... .+-++. ++|+||.
T Consensus 214 ~eiG~a~~~~~~~~~~~eV~Grdl~~GlPk~i~i~s~ev~eal~~~v~~Iveair~~Le~tpPeL~~DI~ergivltGGG 293 (342)
T COG1077 214 IEIGSAYPEEEDEELEMEVRGRDLVTGLPKTITINSEEIAEALEEPLNGIVEAIRLVLEKTPPELAADIVERGIVLTGGG 293 (342)
T ss_pred HHhcccccccCCccceeeEEeeecccCCCeeEEEcHHHHHHHHHHHHHHHHHHHHHHHhhCCchhcccHhhCceEEecch
Confidence 775432 22344555677788888999999999999999999999999999986543 333666 9999999
Q ss_pred CCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHHc
Q psy7639 912 TRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 952 (2568)
Q Consensus 912 sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ls 952 (2568)
+.+..+.+.|++.. +.++....+|-.|||+|+......+.
T Consensus 294 alLrglD~~i~~et-~~pv~ia~~pL~~Va~G~G~~le~~~ 333 (342)
T COG1077 294 ALLRGLDRLLSEET-GVPVIIADDPLTCVAKGTGKALEALD 333 (342)
T ss_pred HHhcCchHhHHhcc-CCeEEECCChHHHHHhccchhhhhhH
Confidence 99999999999987 56777888999999999998877654
No 59
>TIGR01174 ftsA cell division protein FtsA. This bacterial cell division protein interacts with FtsZ, the bacterial homolog of tubulin. It is an ATP-binding protein and shows structural similarities to actin and heat shock cognate protein 70.
Probab=99.75 E-value=2.8e-17 Score=211.62 Aligned_cols=173 Identities=23% Similarity=0.337 Sum_probs=142.4
Q ss_pred HHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCeeeEEEEEEEcCCcEEEEEEeccCCCcchhHH
Q psy7639 2094 RQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDF 2173 (2568)
Q Consensus 2094 R~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt~dvsil~~~~g~~~~v~~~~gd~~lGG~d~ 2173 (2568)
-+++.+|++.|||++.+++.||+|+|++|..... .+..++|+|+||||||++++. +| .... .....+||++|
T Consensus 160 v~~~~~~~~~aGl~~~~i~~~~~A~a~a~~~~~~--~~~~~~vvDiG~gtt~i~i~~--~g-~~~~---~~~i~~GG~~i 231 (371)
T TIGR01174 160 LRNLVKCVERCGLEVDNIVLSGLASAIAVLTEDE--KELGVCLIDIGGGTTDIAVYT--GG-SIRY---TKVIPIGGNHI 231 (371)
T ss_pred HHHHHHHHHHcCCCeeeEEEhhhhhhhhhcCcch--hcCCEEEEEeCCCcEEEEEEE--CC-EEEE---EeeecchHHHH
Confidence 3567789999999999999999999999965432 356799999999999999986 45 2211 24457999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCc------ceeEEEEecccCCcceEEeeCHHHHHHHhH
Q psy7639 2174 DNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSS------TEASIEIDALYDGIDFYTKISRARFEELCS 2247 (2568)
Q Consensus 2174 D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~------~~~~~~i~~~~~~~d~~~~itr~~fe~l~~ 2247 (2568)
|+.|...+ + ..+.+||++|+.++.. .+..+.++.+. .++...+||++|+++++
T Consensus 232 t~~i~~~l--------~-----------~~~~~AE~lK~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~is~~~l~~ii~ 290 (371)
T TIGR01174 232 TKDIAKAL--------R-----------TPLEEAERIKIKYGCASIPLEGPDENIEIPSVG--ERPPRSLSRKELAEIIE 290 (371)
T ss_pred HHHHHHHh--------C-----------CCHHHHHHHHHHeeEecccCCCCCCEEEeccCC--CCCCeEEcHHHHHHHHH
Confidence 99876543 1 1257899999999874 35567776553 46778999999999999
Q ss_pred HHHHHhhHHHH-HHHHHcCCCccCcce-EEEecCccChHHHHHHHHHhcCC
Q psy7639 2248 DLFRSTLQPVE-KALQDAKLDKSAIHD-VVLVGGSTRIPKVQSLLQNFFCG 2296 (2568)
Q Consensus 2248 ~l~~~~~~~~~-~~l~~a~~~~~~i~~-vilvGGstriP~v~~~l~~~f~~ 2296 (2568)
++++++.+.++ +.|++++.+ ++|+. |+|+||+|+||.|++.+++.|+.
T Consensus 291 ~~~~ei~~~i~~~~L~~~~~~-~~i~~gIvLtGG~S~ipgi~~~l~~~~~~ 340 (371)
T TIGR01174 291 ARAEEILEIVKQKELRKSGFK-EELNGGIVLTGGGAQLEGIVELAEKVFDN 340 (371)
T ss_pred HHHHHHHHHHHHHHHHhcCCc-ccCCCEEEEeChHHcccCHHHHHHHHhCC
Confidence 99999999997 999999988 78988 99999999999999999999953
No 60
>TIGR01174 ftsA cell division protein FtsA. This bacterial cell division protein interacts with FtsZ, the bacterial homolog of tubulin. It is an ATP-binding protein and shows structural similarities to actin and heat shock cognate protein 70.
Probab=99.73 E-value=1.2e-16 Score=205.89 Aligned_cols=194 Identities=22% Similarity=0.323 Sum_probs=152.3
Q ss_pred HHHHHHHHHHHHcCCcEEEEecchhHHHHhhccccccCCCceEEEEEeCCcceEEEEeeecCCcEEEEEeeccccccccc
Q psy7639 150 AQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGE 229 (2568)
Q Consensus 150 ~qr~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~ 229 (2568)
...+++.+|++.|||++..++.||.|+|++|.... ..+..++|+|+||||||+++++- |... . .....+||+
T Consensus 158 ~~v~~~~~~~~~aGl~~~~i~~~~~A~a~a~~~~~--~~~~~~~vvDiG~gtt~i~i~~~--g~~~-~---~~~i~~GG~ 229 (371)
T TIGR01174 158 TILRNLVKCVERCGLEVDNIVLSGLASAIAVLTED--EKELGVCLIDIGGGTTDIAVYTG--GSIR-Y---TKVIPIGGN 229 (371)
T ss_pred HHHHHHHHHHHHcCCCeeeEEEhhhhhhhhhcCcc--hhcCCEEEEEeCCCcEEEEEEEC--CEEE-E---EeeecchHH
Confidence 45678889999999999999999999999985432 34567999999999999999963 4221 1 233679999
Q ss_pred chHHHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCCC------CceEEEEeeeccCcceEEeecHHHHHHH
Q psy7639 230 DFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSS------TEASIEIDALYDGIDFYTKISRARFEEL 303 (2568)
Q Consensus 230 ~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~------~~~~i~i~~l~~~~d~~~~itR~efe~l 303 (2568)
+||+.|.+.+. ..+.+||++|+.++.. .+..+.++... .+....++|++|+++
T Consensus 230 ~it~~i~~~l~-------------------~~~~~AE~lK~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~is~~~l~~i 288 (371)
T TIGR01174 230 HITKDIAKALR-------------------TPLEEAERIKIKYGCASIPLEGPDENIEIPSVG--ERPPRSLSRKELAEI 288 (371)
T ss_pred HHHHHHHHHhC-------------------CCHHHHHHHHHHeeEecccCCCCCCEEEeccCC--CCCCeEEcHHHHHHH
Confidence 99998776431 1256899999999863 24456665443 356679999999999
Q ss_pred HhhhhhhhHHHHH-HHHHHcCCCCCCCCe-EEEcCCccchHHHHHHHHHHhCCCccccc------------CCchhHHHh
Q psy7639 304 CSDLFRSTLQPVE-KALQDAKLDKSAIHD-VVLVGGSTRIPKVQSLLQNFFCGKSLNLS------------INPDEAVAY 369 (2568)
Q Consensus 304 ~~~l~~~i~~~i~-~~l~~a~~~~~~i~~-ViLvGG~sriP~v~~~l~~~f~~~~v~~~------------~npdeaVA~ 369 (2568)
+++.++++...++ +.|++++.. .+++. |+|+||+|++|.+++.+++.|+ .++... -+|..++|.
T Consensus 289 i~~~~~ei~~~i~~~~L~~~~~~-~~i~~gIvLtGG~S~ipgi~~~l~~~~~-~~vr~~~P~~~~~~~~~~~~p~~~~a~ 366 (371)
T TIGR01174 289 IEARAEEILEIVKQKELRKSGFK-EELNGGIVLTGGGAQLEGIVELAEKVFD-NPVRIGLPQNIGGLTEDVNDPEYSTAV 366 (371)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCc-ccCCCEEEEeChHHcccCHHHHHHHHhC-CCeEEECCCccCCchhhcCCcHHHHHH
Confidence 9999999999997 999999876 56777 9999999999999999999994 333221 268888888
Q ss_pred hHHHH
Q psy7639 370 GAAVQ 374 (2568)
Q Consensus 370 GAa~~ 374 (2568)
|.++|
T Consensus 367 Gl~~~ 371 (371)
T TIGR01174 367 GLLLY 371 (371)
T ss_pred HHHhC
Confidence 88763
No 61
>PRK09472 ftsA cell division protein FtsA; Reviewed
Probab=99.72 E-value=5.9e-16 Score=201.23 Aligned_cols=196 Identities=19% Similarity=0.273 Sum_probs=147.2
Q ss_pred HHHHHHHHHHcCCcEEEEecchhHHHHhhccccccCCCceEEEEEeCCcceEEEEeeecCCcEEEEEeecccccccccch
Q psy7639 152 RQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDF 231 (2568)
Q Consensus 152 r~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~ 231 (2568)
.+.+..|++.|||++..++.||.|+|.++.... ..+..++|+|+||||||+++++ .|... .......||++|
T Consensus 168 ~~~~~~a~~~aGl~v~~iv~ep~Aaa~a~l~~~--e~~~gv~vvDiGggtTdisv~~--~G~l~----~~~~i~~GG~~i 239 (420)
T PRK09472 168 AKNIVKAVERCGLKVDQLIFAGLASSYAVLTED--ERELGVCVVDIGGGTMDIAVYT--GGALR----HTKVIPYAGNVV 239 (420)
T ss_pred HHHHHHHHHHcCCeEeeEEehhhHHHHHhcChh--hhhcCeEEEEeCCCceEEEEEE--CCEEE----EEeeeechHHHH
Confidence 344567999999999999999999999986542 3467799999999999999996 35221 122256899999
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCCC------CceEEEEeeeccCcceEEeecHHHHHHHHh
Q psy7639 232 DNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSS------TEASIEIDALYDGIDFYTKISRARFEELCS 305 (2568)
Q Consensus 232 D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~------~~~~i~i~~l~~~~d~~~~itR~efe~l~~ 305 (2568)
++.|...+. . -...||++|+.+... .+..+.++...+.. ...++|.+|.+++.
T Consensus 240 t~dIa~~l~--------i-----------~~~~AE~lK~~~g~~~~~~~~~~~~i~v~~~~~~~--~~~i~~~~l~~ii~ 298 (420)
T PRK09472 240 TSDIAYAFG--------T-----------PPSDAEAIKVRHGCALGSIVGKDESVEVPSVGGRP--PRSLQRQTLAEVIE 298 (420)
T ss_pred HHHHHHHhC--------c-----------CHHHHHHHHHhcceeccccCCCCceeEecCCCCCC--CeEEcHHHHHHHHH
Confidence 988875541 1 135799999765431 23456665443322 24889999999999
Q ss_pred hhhhhhHHHHH-------HHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccc------------cCCchhH
Q psy7639 306 DLFRSTLQPVE-------KALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNL------------SINPDEA 366 (2568)
Q Consensus 306 ~l~~~i~~~i~-------~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~------------~~npdea 366 (2568)
+.++++++.++ ..|..+++....++.|+|+||+|++|.+++.+++.|+ .++.. ..+|..|
T Consensus 299 ~r~~ei~~~i~~~l~~~~~~l~~~g~~~~~~~givLtGG~a~lpgi~e~~~~~f~-~~vri~~P~~~~g~~~~~~~P~~a 377 (420)
T PRK09472 299 PRYTELLNLVNEEILQLQEQLRQQGVKHHLAAGIVLTGGAAQIEGLAACAQRVFH-TQVRIGAPLNITGLTDYAQEPYYS 377 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEeCchhccccHHHHHHHHhC-CCeEEeCCcccCCChhhcCCcHHH
Confidence 96666666554 5567778777789999999999999999999999994 44332 1489999
Q ss_pred HHhhHHHHHHH
Q psy7639 367 VAYGAAVQAAI 377 (2568)
Q Consensus 367 VA~GAa~~aa~ 377 (2568)
+|.|.++++..
T Consensus 378 ta~Gl~~~~~~ 388 (420)
T PRK09472 378 TAVGLLHYGKE 388 (420)
T ss_pred HHHHHHHHhhh
Confidence 99999999763
No 62
>PRK09472 ftsA cell division protein FtsA; Reviewed
Probab=99.68 E-value=1.3e-15 Score=198.07 Aligned_cols=197 Identities=21% Similarity=0.303 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHHcCCceEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCCh
Q psy7639 1518 DAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGG 1597 (2568)
Q Consensus 1518 ~~qR~~~~~Aa~~AGL~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG 1597 (2568)
+.+++. .+|++.|||++..++.||.|+|.++..+. ..+..++|+|+||||+|++++. +|. +..+.. -..||
T Consensus 166 ~~~~~~-~~a~~~aGl~v~~iv~ep~Aaa~a~l~~~--e~~~gv~vvDiGggtTdisv~~--~G~---l~~~~~-i~~GG 236 (420)
T PRK09472 166 DMAKNI-VKAVERCGLKVDQLIFAGLASSYAVLTED--ERELGVCVVDIGGGTMDIAVYT--GGA---LRHTKV-IPYAG 236 (420)
T ss_pred HHHHHH-HHHHHHcCCeEeeEEehhhHHHHHhcChh--hhhcCeEEEEeCCCceEEEEEE--CCE---EEEEee-eechH
Confidence 445555 56999999999999999999999986543 3456799999999999999998 662 223333 34799
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhcccC----CC--CeeEEEEccccCCcceeeecCHHHHHH
Q psy7639 1598 EDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLS----SS--TEASIEIDALYDGIDFYTKISRARFEE 1671 (2568)
Q Consensus 1598 ~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls----~~--~~~~i~i~~~~~~~~~~~~itr~~fe~ 1671 (2568)
.+|++.|+..|. . -+..||++|+... .. .+..+.++...+... ..+++.+|.+
T Consensus 237 ~~it~dIa~~l~--------i-----------~~~~AE~lK~~~g~~~~~~~~~~~~i~v~~~~~~~~--~~i~~~~l~~ 295 (420)
T PRK09472 237 NVVTSDIAYAFG--------T-----------PPSDAEAIKVRHGCALGSIVGKDESVEVPSVGGRPP--RSLQRQTLAE 295 (420)
T ss_pred HHHHHHHHHHhC--------c-----------CHHHHHHHHHhcceeccccCCCCceeEecCCCCCCC--eEEcHHHHHH
Confidence 999999986641 1 1368999996543 21 235566664433322 3789999999
Q ss_pred HHhHHHHHHHHHHH-------HHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccc------------cCCc
Q psy7639 1672 LCSDLFRSTLQPVE-------KALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNL------------SINP 1732 (2568)
Q Consensus 1672 l~~pli~~i~~~i~-------~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~------------~~nP 1732 (2568)
++.|.++.+++.+. ..|.++++....++.|+|+||+|++|.+++++++.|+ .+++. ..+|
T Consensus 296 ii~~r~~ei~~~i~~~l~~~~~~l~~~g~~~~~~~givLtGG~a~lpgi~e~~~~~f~-~~vri~~P~~~~g~~~~~~~P 374 (420)
T PRK09472 296 VIEPRYTELLNLVNEEILQLQEQLRQQGVKHHLAAGIVLTGGAAQIEGLAACAQRVFH-TQVRIGAPLNITGLTDYAQEP 374 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEeCchhccccHHHHHHHHhC-CCeEEeCCcccCCChhhcCCc
Confidence 99996666655554 5667778888889999999999999999999999995 33332 2489
Q ss_pred hhhhhccHHHHHH
Q psy7639 1733 DEAVAYGAAVQAA 1745 (2568)
Q Consensus 1733 ~eAVA~GAai~a~ 1745 (2568)
..|+|.|.++|+.
T Consensus 375 ~~ata~Gl~~~~~ 387 (420)
T PRK09472 375 YYSTAVGLLHYGK 387 (420)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999975
No 63
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning]
Probab=99.46 E-value=6.7e-12 Score=158.17 Aligned_cols=323 Identities=24% Similarity=0.328 Sum_probs=216.0
Q ss_pred ccccccCcccccchhhhccCCCCceeeeccc-ccccccccCCCceeecHHHHHhHhhCCCchHHhhhhhcCCCCCChhHH
Q psy7639 3 ESYIAEGPCAISPAQRRVMRDPGRVVERAAL-ELRVKSLTNPLSYFTGDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQ 81 (2568)
Q Consensus 3 ~~~~~~g~~~~~~a~~~~~~~~~~~~e~~~~-~~~v~~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 81 (2568)
..|+|.||+.+++...... +.| +.++.+. ...-+.+. ...++==+|..++.+ .++....+..|...++-.+.
T Consensus 8 iv~LDIGTskV~~lVge~~-~~g-~i~iig~g~~~SrGik--~G~I~di~~~~~sI~---~av~~AE~mag~~i~~v~vs 80 (418)
T COG0849 8 IVGLDIGTSKVKALVGELR-PDG-RLNIIGVGSHPSRGIK--KGVIVDLDAAAQSIK---KAVEAAERMAGCEIKSVIVS 80 (418)
T ss_pred EEEEEccCcEEEEEEEEEc-CCC-eEEEEeeecccCcccc--cceEEcHHHHHHHHH---HHHHHHHHhcCCCcceEEEE
Confidence 5789999999988765543 444 3555443 11112221 123343344444432 56777777788775432110
Q ss_pred hhcccCCeEEEecCCCCcEEEEEcCcceeecHHHHHHHHHHHHHHHHHHHhCCCCCeE----------------------
Q psy7639 82 QDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDA---------------------- 139 (2568)
Q Consensus 82 ~~~~~~p~~~~~~~~~~~~~v~~~~~~~~~speel~a~~L~~l~~~ae~~l~~~~~~~---------------------- 139 (2568)
.+-..+ ........+.+.++ +.++.+++- ++.+.|......+-.++
T Consensus 81 -----~sG~~i-~s~~~~g~v~i~~~-~eIt~~DI~-----rvl~~A~~~~~~~~~~ilh~~p~~y~vD~~~~I~dP~gm 148 (418)
T COG0849 81 -----LSGNHI-KSQNVNGEVSISEE-KEITQEDIE-----RVLEAAKAVAIPPEREILHVIPQEYIVDGQEGIKDPLGM 148 (418)
T ss_pred -----ecccee-EEEeeEEEEEcCCC-CccCHHHHH-----HHHHHHHhhccCCCceEEEEeeeEEEECCccccCCcccc
Confidence 000000 00111223444443 667777765 33344433222222333
Q ss_pred ----------EEEecCCCCHHHHHHHHHHHHHcCCcEEEEecchhHHHHhhccccccCCCceEEEEEeCCcceEEEEeee
Q psy7639 140 ----------VITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSI 209 (2568)
Q Consensus 140 ----------VITVPa~f~~~qr~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GggT~Dvsv~~~ 209 (2568)
++|+|..+ -+.+.+|.+.|||++..++-+|.|+|.+...+ ..++-.++++|+||||||+++++-
T Consensus 149 ~G~rL~v~vhvit~~~~~----~~Nl~k~v~r~gl~v~~i~l~plAsa~a~L~~--dEkelGv~lIDiG~GTTdIai~~~ 222 (418)
T COG0849 149 SGVRLEVEVHVITGPKNI----LENLEKCVERAGLKVDNIVLEPLASALAVLTE--DEKELGVALIDIGGGTTDIAIYKN 222 (418)
T ss_pred ccceEEEEEEEEEcchHH----HHHHHHHHHHhCCCeeeEEEehhhhhhhccCc--ccHhcCeEEEEeCCCcEEEEEEEC
Confidence 45555433 56788999999999999999999999887654 245678999999999999999963
Q ss_pred cCCcEEEEEeecccccccccchHHHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCCC------CceEEEEe
Q psy7639 210 DEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSS------TEASIEID 283 (2568)
Q Consensus 210 ~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~------~~~~i~i~ 283 (2568)
|. +.. .+-..+||++++..|..-|.-.+ ..||+.|+..... .+..+.++
T Consensus 223 --G~---l~~-~~~ipvgG~~vT~DIa~~l~t~~-------------------~~AE~iK~~~g~a~~~~~~~~~~i~v~ 277 (418)
T COG0849 223 --GA---LRY-TGVIPVGGDHVTKDIAKGLKTPF-------------------EEAERIKIKYGSALISLADDEETIEVP 277 (418)
T ss_pred --CE---EEE-EeeEeeCccHHHHHHHHHhCCCH-------------------HHHHHHHHHcCccccCcCCCcceEecc
Confidence 42 222 23367999999999887754333 3789999887653 23446666
Q ss_pred eeccCcceEEeecHHHHHHHHhhhhhhhHHHHHHHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccc----
Q psy7639 284 ALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNL---- 359 (2568)
Q Consensus 284 ~l~~~~d~~~~itR~efe~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~---- 359 (2568)
...+.. ...+||.++.+++++-+.+++.++++.|++.+....-...|+|+||++.+|.+.+..++.|+ .+++.
T Consensus 278 ~vg~~~--~~~~t~~~ls~II~aR~~Ei~~lV~~~l~~~g~~~~~~~gvVlTGG~a~l~Gi~elA~~if~-~~vRig~P~ 354 (418)
T COG0849 278 SVGSDI--PRQVTRSELSEIIEARVEEILELVKAELRKSGLPNHLPGGVVLTGGGAQLPGIVELAERIFG-RPVRLGVPL 354 (418)
T ss_pred cCCCcc--cchhhHHHHHHHHHhhHHHHHHHHHHHHHHcCccccCCCeEEEECchhcCccHHHHHHHhcC-CceEeCCCc
Confidence 544433 67899999999999999999999999999999887778999999999999999999999994 32211
Q ss_pred --------cCCchhHHHhhHHHHHHHH
Q psy7639 360 --------SINPDEAVAYGAAVQAAIL 378 (2568)
Q Consensus 360 --------~~npdeaVA~GAa~~aa~l 378 (2568)
..+|..++|.|..+++...
T Consensus 355 ~~~Gl~d~~~~p~fs~avGl~~~~~~~ 381 (418)
T COG0849 355 NIVGLTDIARNPAFSTAVGLLLYGALM 381 (418)
T ss_pred cccCchhhccCchhhhhHHHHHHHhhc
Confidence 2368999999999988754
No 64
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning]
Probab=99.40 E-value=3e-12 Score=161.27 Aligned_cols=210 Identities=29% Similarity=0.416 Sum_probs=166.3
Q ss_pred ccceEEEEecCCCCHHHHHHHHHHHHHcCCceEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcE
Q psy7639 1504 SVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGAL 1583 (2568)
Q Consensus 1504 ~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~ 1583 (2568)
.+.--++|+|..+- +-+.+|.+.|||++..++.+|-|+|.+...+. ..+..++++|+||||+|+++++ +|
T Consensus 154 ~v~vhvit~~~~~~----~Nl~k~v~r~gl~v~~i~l~plAsa~a~L~~d--EkelGv~lIDiG~GTTdIai~~--~G-- 223 (418)
T COG0849 154 EVEVHVITGPKNIL----ENLEKCVERAGLKVDNIVLEPLASALAVLTED--EKELGVALIDIGGGTTDIAIYK--NG-- 223 (418)
T ss_pred EEEEEEEEcchHHH----HHHHHHHHHhCCCeeeEEEehhhhhhhccCcc--cHhcCeEEEEeCCCcEEEEEEE--CC--
Confidence 36667899998874 56888999999999999999999999886644 4567799999999999999998 77
Q ss_pred EEEEEecCCCCCChhHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhcccCC------CCeeEEEEccccCC
Q psy7639 1584 FEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSS------STEASIEIDALYDG 1657 (2568)
Q Consensus 1584 ~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~------~~~~~i~i~~~~~~ 1657 (2568)
.+..+.- -..||.+++..|+.-|.- + ++.||+.|..... .....+.++...+.
T Consensus 224 -~l~~~~~-ipvgG~~vT~DIa~~l~t--------~-----------~~~AE~iK~~~g~a~~~~~~~~~~i~v~~vg~~ 282 (418)
T COG0849 224 -ALRYTGV-IPVGGDHVTKDIAKGLKT--------P-----------FEEAERIKIKYGSALISLADDEETIEVPSVGSD 282 (418)
T ss_pred -EEEEEee-EeeCccHHHHHHHHHhCC--------C-----------HHHHHHHHHHcCccccCcCCCcceEecccCCCc
Confidence 4444444 448999999999887532 1 3467777766542 23344666554443
Q ss_pred cceeeecCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccc---------
Q psy7639 1658 IDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNL--------- 1728 (2568)
Q Consensus 1658 ~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~--------- 1728 (2568)
. ...+|+..+.+++++.+..++..++..|++.+....-...|+|+||++.+|.+.+..++.|+ ..++.
T Consensus 283 ~--~~~~t~~~ls~II~aR~~Ei~~lV~~~l~~~g~~~~~~~gvVlTGG~a~l~Gi~elA~~if~-~~vRig~P~~~~Gl 359 (418)
T COG0849 283 I--PRQVTRSELSEIIEARVEEILELVKAELRKSGLPNHLPGGVVLTGGGAQLPGIVELAERIFG-RPVRLGVPLNIVGL 359 (418)
T ss_pred c--cchhhHHHHHHHHHhhHHHHHHHHHHHHHHcCccccCCCeEEEECchhcCccHHHHHHHhcC-CceEeCCCccccCc
Confidence 3 45799999999999999999999999999999877677889999999999999999999994 33322
Q ss_pred ---cCCchhhhhccHHHHHHHH
Q psy7639 1729 ---SINPDEAVAYGAAVQAAIL 1747 (2568)
Q Consensus 1729 ---~~nP~eAVA~GAai~a~~l 1747 (2568)
..+|..+.|.|...|+...
T Consensus 360 ~d~~~~p~fs~avGl~~~~~~~ 381 (418)
T COG0849 360 TDIARNPAFSTAVGLLLYGALM 381 (418)
T ss_pred hhhccCchhhhhHHHHHHHhhc
Confidence 2357889999998888643
No 65
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]
Probab=99.38 E-value=3.3e-13 Score=145.43 Aligned_cols=195 Identities=26% Similarity=0.394 Sum_probs=155.1
Q ss_pred HHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCceEEEEechhHHHHHhhccccccCcceEEEEEeC
Q psy7639 1488 MVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLG 1567 (2568)
Q Consensus 1488 ~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~G 1567 (2568)
.+.+++|+.+|..+|...+.+.-++|..-.....+..-+..+.||++++..++||||||--.+++. -.|+|+|
T Consensus 76 eiVrrlkd~lEk~lGi~~tha~taiPPGt~~~~~ri~iNViESAGlevl~vlDEPTAaa~vL~l~d-------g~VVDiG 148 (277)
T COG4820 76 EIVRRLKDTLEKQLGIRFTHAATAIPPGTEQGDPRISINVIESAGLEVLHVLDEPTAAADVLQLDD-------GGVVDIG 148 (277)
T ss_pred HHHHHHHHHHHHhhCeEeeeccccCCCCccCCCceEEEEeecccCceeeeecCCchhHHHHhccCC-------CcEEEeC
Confidence 578999999999999999999999999987777778888899999999999999999998765543 3899999
Q ss_pred CcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCee
Q psy7639 1568 GGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEA 1647 (2568)
Q Consensus 1568 GGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~ 1647 (2568)
|||+-+||++ +| +|..+.... .||..++-.|+-+ ++++ ++++|.-|+.--.
T Consensus 149 GGTTGIsi~k--kG---kViy~ADEp-TGGtHmtLvlAG~--------ygi~-----------~EeAE~~Kr~~k~---- 199 (277)
T COG4820 149 GGTTGISIVK--KG---KVIYSADEP-TGGTHMTLVLAGN--------YGIS-----------LEEAEQYKRGHKK---- 199 (277)
T ss_pred CCcceeEEEE--cC---cEEEeccCC-CCceeEEEEEecc--------cCcC-----------HhHHHHhhhcccc----
Confidence 9999999999 77 566666544 7888887766654 3343 3466766654211
Q ss_pred EEEEccccCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcCCccc
Q psy7639 1648 SIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLN 1727 (2568)
Q Consensus 1648 ~i~i~~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~ 1727 (2568)
.++.-..++|+++++.+++.+-++..+ |..++||||+|..|.+.+..++.| +-.+.
T Consensus 200 ------------------~~Eif~~v~PV~eKMAeIv~~hie~~~-----i~dl~lvGGac~~~g~e~~Fe~~l-~l~v~ 255 (277)
T COG4820 200 ------------------GEEIFPVVKPVYEKMAEIVARHIEGQG-----ITDLWLVGGACMQPGVEELFEKQL-ALQVH 255 (277)
T ss_pred ------------------chhcccchhHHHHHHHHHHHHHhccCC-----CcceEEecccccCccHHHHHHHHh-ccccc
Confidence 112223578999999999999998876 445999999999999999999999 67777
Q ss_pred ccCCchhhhhccHHH
Q psy7639 1728 LSINPDEAVAYGAAV 1742 (2568)
Q Consensus 1728 ~~~nP~eAVA~GAai 1742 (2568)
.+..|....-+|-|+
T Consensus 256 ~P~~p~y~TPLgIA~ 270 (277)
T COG4820 256 LPQHPLYMTPLGIAS 270 (277)
T ss_pred cCCCcceechhhhhh
Confidence 777777666666653
No 66
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton. Interaction with myosin provides the basis of muscular contraction and many aspects of cell motility. Each actin protomer binds one molecule of ATP and either calcium or magnesium ions. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Polymerization is regulated by so-called capping proteins. The ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins.
Probab=99.21 E-value=1.3e-10 Score=150.37 Aligned_cols=238 Identities=18% Similarity=0.179 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCHHHHHHHHHH-HHHcCCcEEEEecchhHHHHhhccccccCCCceEEE
Q psy7639 116 ISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDA-GAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLI 194 (2568)
Q Consensus 116 l~a~~L~~l~~~ae~~l~~~~~~~VITVPa~f~~~qr~al~~A-a~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV 194 (2568)
....+|+++....-. ....-..++|++|..++..+|+.+.+. .+..|+..+.++++|.+|+++++. .+-+|
T Consensus 76 ~~e~~~~~~~~~~l~-~~~~~~~vvl~~p~~~~~~~r~~~~e~lfe~~~~~~v~~~~~~~~a~~~~g~-------~~~lV 147 (371)
T cd00012 76 DMEKIWDHLFFNELK-VNPEEHPVLLTEPPLNPKSNREKTTEIMFETFNVPALYVAIQAVLSLYASGR-------TTGLV 147 (371)
T ss_pred HHHHHHHHHHHHhcC-CCCCCCceEEecCCCCCHHHHHHHHHHhhccCCCCEEEEechHHHHHHhcCC-------CeEEE
Confidence 444566665543211 112245799999999998888888775 567899999999999999998864 47899
Q ss_pred EEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCC
Q psy7639 195 FDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSS 274 (2568)
Q Consensus 195 ~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~ 274 (2568)
+|+|+++|+++.+. +|.. +........+||.++|+.|.+++..+.. ..+.. .-...++..|+.+..
T Consensus 148 VDiG~~~t~i~pv~--~G~~--~~~~~~~~~~GG~~l~~~l~~~l~~~~~---~~~~~-------~~~~~~~~iKe~~~~ 213 (371)
T cd00012 148 VDSGDGVTHVVPVY--DGYV--LPHAIKRLDLAGRDLTRYLKELLRERGY---ELNSS-------DEREIVRDIKEKLCY 213 (371)
T ss_pred EECCCCeeEEEEEE--CCEE--chhhheeccccHHHHHHHHHHHHHhcCC---Cccch-------hHHHHHHHHHHhhee
Confidence 99999999998874 3522 2222234679999999999998755321 00111 112345566655432
Q ss_pred CCc--------------eEEEEeeeccCcceEEeecHHHH---HHHHhh-----hhhhhHHHHHHHHHHcCCCC--CCCC
Q psy7639 275 STE--------------ASIEIDALYDGIDFYTKISRARF---EELCSD-----LFRSTLQPVEKALQDAKLDK--SAIH 330 (2568)
Q Consensus 275 ~~~--------------~~i~i~~l~~~~d~~~~itR~ef---e~l~~~-----l~~~i~~~i~~~l~~a~~~~--~~i~ 330 (2568)
-.. .....-.+.++. .+.++.+.| |.++.| ....+.+.|.+++..+..+. .-.+
T Consensus 214 v~~~~~~~~~~~~~~~~~~~~~~~lpd~~--~i~~~~er~~~~E~lF~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~ 291 (371)
T cd00012 214 VALDIEEEQDKSAKETSLLEKTYELPDGR--TIKVGNERFRAPEILFNPSLIGSEQVGISEAIYSSINKCDIDLRKDLYS 291 (371)
T ss_pred ecCCHHHHHHhhhccCCccceeEECCCCe--EEEEChHHhhChHhcCChhhcCCCcCCHHHHHHHHHHhCCHhHHHHHHh
Confidence 100 000001122332 345565544 334444 23477888999998775432 2378
Q ss_pred eEEEcCCccchHHHHHHHHHHhCCC---------cccccCCchhHHHhhHHHHHHH
Q psy7639 331 DVVLVGGSTRIPKVQSLLQNFFCGK---------SLNLSINPDEAVAYGAAVQAAI 377 (2568)
Q Consensus 331 ~ViLvGG~sriP~v~~~l~~~f~~~---------~v~~~~npdeaVA~GAa~~aa~ 377 (2568)
.|+|+||+|++|.+.++|++.+... .+....+|..++-.||+++|..
T Consensus 292 ~Ivl~GG~s~~~gl~~rl~~el~~~~~~~~~~~~~~~~~~~~~~~aw~G~si~as~ 347 (371)
T cd00012 292 NIVLSGGSTLFPGFGERLQKELLKLAPPSKDTKVKVIAPPERKYSVWLGGSILASL 347 (371)
T ss_pred CEEEeCCccCCcCHHHHHHHHHHHhCCcccceEEEEccCCCccccEEeCchhhcCc
Confidence 8999999999999999999888421 2234568899999999998864
No 67
>PRK13917 plasmid segregation protein ParM; Provisional
Probab=99.08 E-value=2.6e-09 Score=135.37 Aligned_cols=210 Identities=18% Similarity=0.234 Sum_probs=137.9
Q ss_pred CCCeEE--EEecCCCCHHHH-HHHHHHHHHc------C------CcEEEEecchhHHHHhhccccc------cCCCceEE
Q psy7639 135 SVRDAV--ITVPAYFNDAQR-QATKDAGAIA------G------LNVMRIVNEPTAAALAYGLDKN------LKGERNVL 193 (2568)
Q Consensus 135 ~~~~~V--ITVPa~f~~~qr-~al~~Aa~~A------G------l~~~~li~Ep~AAAl~y~~~~~------~~~~~~vl 193 (2568)
.+.+++ ...|..+-..++ +.+++..... | ++.+.+++||.+|.+++..+.. ......++
T Consensus 109 ~~~~v~l~tGLPv~~~~~~~~~~l~k~l~~~~~v~~~g~~~~I~i~~V~V~pQ~~ga~~~~~~~~~g~~~~~~~~~~~il 188 (344)
T PRK13917 109 EVVEVVVATGMPSEEIGTDKVAKFEKLLNKSRLIEINGIAVTINVKGVKVVAQPMGTLLDLYLDNDGVVADKAFEEGKVS 188 (344)
T ss_pred CcceeEEEEcCCHHHHHHHHHHHHHHHhcCceEEEECCEEEEEEEEEEEEecccHHHHHHHHhcccCcccchhcccCcEE
Confidence 345444 588998854443 6666554221 1 2346789999999887765422 12345789
Q ss_pred EEEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcC
Q psy7639 194 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLS 273 (2568)
Q Consensus 194 V~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS 273 (2568)
|+|+|+||||+++++ .+ .+ +....+....|..++.+.|.+++..+. ++. ..+...+. +. |.
T Consensus 189 vIDIG~~TtD~~v~~--~~-~~-~~~~s~s~~~G~~~~~~~I~~~i~~~~---~~~--~~~~~~ie---~~-------l~ 249 (344)
T PRK13917 189 VIDFGSGTTDLDTIQ--NL-KR-VEEESFVIPKGTIDVYKRIASHISKKE---EGA--SITPYMLE---KG-------LE 249 (344)
T ss_pred EEEcCCCcEEEEEEe--Cc-EE-cccccccccchHHHHHHHHHHHHHhhC---CCC--CCCHHHHH---HH-------HH
Confidence 999999999999986 23 21 233334466899899888887774332 222 22222221 11 22
Q ss_pred CCCceEEEEeeeccCcceEEeecHHHHHHHHhhhhhhhHHHHHHHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhC
Q psy7639 274 SSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFC 353 (2568)
Q Consensus 274 ~~~~~~i~i~~l~~~~d~~~~itR~efe~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~ 353 (2568)
.. .+.+ ..+.. +.+ ++++.++++++++++...++..+.+ ..+++.|+|+||++++ +++.|++.|+
T Consensus 250 ~g---~i~~---~~~~~--id~-~~~~~~~~~~~~~~i~~~i~~~~~~----~~~~d~IiL~GGGA~l--l~~~lk~~f~ 314 (344)
T PRK13917 250 YG---ACKL---NQKTV--IDF-KDEFYKEQDSVIDEVMSGFEIAVGN----INSFDRVIVTGGGANI--FFDSLSHWYS 314 (344)
T ss_pred cC---cEEe---CCCce--Eeh-HHHHHHHHHHHHHHHHHHHHHHhcc----cCCCCEEEEECCcHHH--HHHHHHHHcC
Confidence 11 1211 11111 222 4667889999999999888888854 3478999999999988 8899999996
Q ss_pred CCcccccCCchhHHHhhHHHHHHHHcC
Q psy7639 354 GKSLNLSINPDEAVAYGAAVQAAILSG 380 (2568)
Q Consensus 354 ~~~v~~~~npdeaVA~GAa~~aa~ls~ 380 (2568)
.. ....||..|.|+|...+|..+.+
T Consensus 315 ~~--~~~~~p~~ANa~G~~~~g~~~~~ 339 (344)
T PRK13917 315 DV--EKADESQFANVRGYYKYGELLKN 339 (344)
T ss_pred Ce--EEcCChHHHHHHHHHHHHHHHhc
Confidence 43 55689999999999999987654
No 68
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]
Probab=99.07 E-value=7.5e-11 Score=127.60 Aligned_cols=195 Identities=27% Similarity=0.402 Sum_probs=146.1
Q ss_pred HHHHHHHHHHHHHhCCCCCeEEEEEcCCCCHHHHHHHHHHHHHcCCCeeeecchhHHHHHHhccccCCCCCceEEEEEeC
Q psy7639 692 MVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLG 771 (2568)
Q Consensus 692 ~iL~~L~~~ae~~~~~~~~~~VITVPa~f~~~qr~al~~Aa~~AGl~~l~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~G 771 (2568)
.+.+++++.+|.++|..+.++.-++|..--....+...+..+.||++++..++||+|||.-.+++ .-.|+|+|
T Consensus 76 eiVrrlkd~lEk~lGi~~tha~taiPPGt~~~~~ri~iNViESAGlevl~vlDEPTAaa~vL~l~-------dg~VVDiG 148 (277)
T COG4820 76 EIVRRLKDTLEKQLGIRFTHAATAIPPGTEQGDPRISINVIESAGLEVLHVLDEPTAAADVLQLD-------DGGVVDIG 148 (277)
T ss_pred HHHHHHHHHHHHhhCeEeeeccccCCCCccCCCceEEEEeecccCceeeeecCCchhHHHHhccC-------CCcEEEeC
Confidence 56789999999999999999999999988777777888889999999999999999999766654 24799999
Q ss_pred CceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHhcCCCCcc
Q psy7639 772 GGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEA 851 (2568)
Q Consensus 772 gGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~LS~~~~~ 851 (2568)
|||+-+||++ +| +|..+ -|...||..+...|.-+ ++.+ ..+||.-|+.-....+
T Consensus 149 GGTTGIsi~k--kG---kViy~-ADEpTGGtHmtLvlAG~--------ygi~-----------~EeAE~~Kr~~k~~~E- 202 (277)
T COG4820 149 GGTTGISIVK--KG---KVIYS-ADEPTGGTHMTLVLAGN--------YGIS-----------LEEAEQYKRGHKKGEE- 202 (277)
T ss_pred CCcceeEEEE--cC---cEEEe-ccCCCCceeEEEEEecc--------cCcC-----------HhHHHHhhhccccchh-
Confidence 9999999997 45 23332 34667887766544332 2221 2255666653321111
Q ss_pred eeeeccccCCcceEEecchHhHHHHHHHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCCcccc
Q psy7639 852 SIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLN 931 (2568)
Q Consensus 852 ~i~i~~l~~~~d~~~~itr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~ 931 (2568)
.--.+.|+++++.+.+.+.++..+ +..+.|+||+|.-|.+.+..++.| ...+.
T Consensus 203 ---------------------if~~v~PV~eKMAeIv~~hie~~~-----i~dl~lvGGac~~~g~e~~Fe~~l-~l~v~ 255 (277)
T COG4820 203 ---------------------IFPVVKPVYEKMAEIVARHIEGQG-----ITDLWLVGGACMQPGVEELFEKQL-ALQVH 255 (277)
T ss_pred ---------------------cccchhHHHHHHHHHHHHHhccCC-----CcceEEecccccCccHHHHHHHHh-ccccc
Confidence 112367899999999999888765 667999999999999999999999 67777
Q ss_pred ccCCchhHHHhhHHH
Q psy7639 932 LSINPDEAVAYGAAV 946 (2568)
Q Consensus 932 ~~~npdeaVA~GAAl 946 (2568)
.+..|...--.|-|+
T Consensus 256 ~P~~p~y~TPLgIA~ 270 (277)
T COG4820 256 LPQHPLYMTPLGIAS 270 (277)
T ss_pred cCCCcceechhhhhh
Confidence 776666555555443
No 69
>smart00268 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Probab=99.05 E-value=8.9e-10 Score=142.88 Aligned_cols=236 Identities=19% Similarity=0.210 Sum_probs=150.6
Q ss_pred HHHHHHHHHHHHHHHHHhCC--CCCeEEEEecCCCCHHHHHHHHHHH-HHcCCcEEEEecchhHHHHhhccccccCCCce
Q psy7639 115 EISSMVLTKMKETAEAYLGH--SVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERN 191 (2568)
Q Consensus 115 el~a~~L~~l~~~ae~~l~~--~~~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~ 191 (2568)
+....+|+++... .++. .-..++||.|...+..+|+.+.+.+ +..|+..+.++++|.+|+++++ ..+
T Consensus 75 ~~~e~i~~~~~~~---~l~~~~~~~~vll~~p~~~~~~~r~~~~e~lfE~~~~~~v~~~~~~~~a~~~~g-------~~~ 144 (373)
T smart00268 75 DDMEKIWDYTFFN---ELRVEPEEHPVLLTEPPMNPKSNREKILEIMFETFNFPALYIAIQAVLSLYASG-------RTT 144 (373)
T ss_pred HHHHHHHHHHHhh---hcCCCCccCeeEEecCCCCCHHHHHHHHHHhhccCCCCeEEEeccHHHHHHhCC-------CCE
Confidence 4556666666653 2332 2356899999999999999998887 5679999999999999999886 347
Q ss_pred EEEEEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHh
Q psy7639 192 VLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRT 271 (2568)
Q Consensus 192 vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~ 271 (2568)
-+|+|+|+++++++.+. +|.. +........+||.++|+.|.++|...-. ++ +.. .-...++.+|+.
T Consensus 145 ~lVVDiG~~~t~v~pv~--~G~~--~~~~~~~~~~GG~~l~~~l~~~l~~~~~-~~------~~~---~~~~~~~~iKe~ 210 (373)
T smart00268 145 GLVIDSGDGVTHVVPVV--DGYV--LPHAIKRIDIAGRDLTDYLKELLSERGY-QF------NSS---AEFEIVREIKEK 210 (373)
T ss_pred EEEEecCCCcceEEEEE--CCEE--chhhheeccCcHHHHHHHHHHHHHhcCC-CC------CcH---HHHHHHHHhhhh
Confidence 89999999999999885 4522 2222223579999999999988765110 00 000 112234445544
Q ss_pred cCCC-----------------CceEEEEeeeccCcceEEeecHHHH---HHHHhhh-----hhhhHHHHHHHHHHcCCCC
Q psy7639 272 LSSS-----------------TEASIEIDALYDGIDFYTKISRARF---EELCSDL-----FRSTLQPVEKALQDAKLDK 326 (2568)
Q Consensus 272 LS~~-----------------~~~~i~i~~l~~~~d~~~~itR~ef---e~l~~~l-----~~~i~~~i~~~l~~a~~~~ 326 (2568)
+..- ....... .+.++..+ .+..+.| |.++.|. ...+.+.|.++|..+....
T Consensus 211 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~lpdg~~~--~~~~er~~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~d~ 287 (373)
T smart00268 211 LCYVAEDFEKEMKKARESSESSKLEKTY-ELPDGNTI--KVGNERFRIPEILFKPELIGLEQKGIHELVYESIQKCDIDV 287 (373)
T ss_pred eeeecCChHHHHHHhhhcccccccceeE-ECCCCCEE--EEChHHeeCchhcCCchhcCCCcCCHHHHHHHHHHhCCHhH
Confidence 3211 0000111 12344333 3333333 3344442 3477888888888775432
Q ss_pred C--CCCeEEEcCCccchHHHHHHHHHHhCCC-------cccccCCchhHHHhhHHHHHHH
Q psy7639 327 S--AIHDVVLVGGSTRIPKVQSLLQNFFCGK-------SLNLSINPDEAVAYGAAVQAAI 377 (2568)
Q Consensus 327 ~--~i~~ViLvGG~sriP~v~~~l~~~f~~~-------~v~~~~npdeaVA~GAa~~aa~ 377 (2568)
. -.+.|+|+||+|++|.+.++|++.+... .+..+.++..++=.||+++|..
T Consensus 288 r~~l~~nIvltGG~s~i~Gl~~RL~~el~~~~p~~~~v~v~~~~~~~~~~W~G~silas~ 347 (373)
T smart00268 288 RKDLYENIVLSGGSTLIPGFGERLEKELKQLAPKKLKVKVIAPPERKYSVWLGGSILASL 347 (373)
T ss_pred HHHHHhCeEeecccccCcCHHHHHHHHHHHhCCCCceeEEecCCCCccceEeCcccccCc
Confidence 1 2678999999999999999999887211 2222345566777788777653
No 70
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton. Interaction with myosin provides the basis of muscular contraction and many aspects of cell motility. Each actin protomer binds one molecule of ATP and either calcium or magnesium ions. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Polymerization is regulated by so-called capping proteins. The ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins.
Probab=98.98 E-value=4.1e-09 Score=136.60 Aligned_cols=239 Identities=18% Similarity=0.189 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCHHHHHHHHHH-HHHcCCCeeeecchhHHHHHHhccccCCCCCceEE
Q psy7639 688 EISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDA-GAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVL 766 (2568)
Q Consensus 688 ev~a~iL~~L~~~ae~~~~~~~~~~VITVPa~f~~~qr~al~~A-a~~AGl~~l~li~Ep~AAAl~y~~~~~~~~~~~vl 766 (2568)
+....+++++....-. ....-..+++++|..++..+|+.+.+. .+..|+..+.++++|.+|+++++. .+.+
T Consensus 75 ~~~e~~~~~~~~~~l~-~~~~~~~vvl~~p~~~~~~~r~~~~e~lfe~~~~~~v~~~~~~~~a~~~~g~-------~~~l 146 (371)
T cd00012 75 DDMEKIWDHLFFNELK-VNPEEHPVLLTEPPLNPKSNREKTTEIMFETFNVPALYVAIQAVLSLYASGR-------TTGL 146 (371)
T ss_pred HHHHHHHHHHHHHhcC-CCCCCCceEEecCCCCCHHHHHHHHHHhhccCCCCEEEEechHHHHHHhcCC-------CeEE
Confidence 4445666665543211 112346799999999998888888765 677999999999999999999864 5789
Q ss_pred EEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHhcC
Q psy7639 767 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLS 846 (2568)
Q Consensus 767 V~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~LS 846 (2568)
|+|+|+++++++.+. +|. -+........+||.++|+.|.+++..... ..+.. .-...++..|+.+.
T Consensus 147 VVDiG~~~t~i~pv~--~G~--~~~~~~~~~~~GG~~l~~~l~~~l~~~~~---~~~~~-------~~~~~~~~iKe~~~ 212 (371)
T cd00012 147 VVDSGDGVTHVVPVY--DGY--VLPHAIKRLDLAGRDLTRYLKELLRERGY---ELNSS-------DEREIVRDIKEKLC 212 (371)
T ss_pred EEECCCCeeEEEEEE--CCE--EchhhheeccccHHHHHHHHHHHHHhcCC---Cccch-------hHHHHHHHHHHhhe
Confidence 999999999998875 452 22233344679999999999988764321 00111 11234566666543
Q ss_pred CCCc---ce-----------eeeccccCCcceEEecchHhH---HHHHHH-----HHHhHHHHHHHHHHHccCC--ccCc
Q psy7639 847 SSTE---AS-----------IEIDALYDGIDFYTKISRARF---EELCSD-----LFRSTLQPVEKALQDAKLD--KSAI 902 (2568)
Q Consensus 847 ~~~~---~~-----------i~i~~l~~~~d~~~~itr~ef---e~l~~~-----l~~~i~~~i~~~L~~a~~~--~~~I 902 (2568)
.-.. .. ...-.+.++. .+.++.+.| |.++.| ....+.+.|.++|.....+ ..-+
T Consensus 213 ~v~~~~~~~~~~~~~~~~~~~~~~~lpd~~--~i~~~~er~~~~E~lF~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~ 290 (371)
T cd00012 213 YVALDIEEEQDKSAKETSLLEKTYELPDGR--TIKVGNERFRAPEILFNPSLIGSEQVGISEAIYSSINKCDIDLRKDLY 290 (371)
T ss_pred eecCCHHHHHHhhhccCCccceeEECCCCe--EEEEChHHhhChHhcCChhhcCCCcCCHHHHHHHHHHhCCHhHHHHHH
Confidence 2110 00 0001122232 344554433 223333 1236778888888876433 2337
Q ss_pred CeEEEEcCCCCcHHHHHHHHHHhCCc---------cccccCCchhHHHhhHHHHHHH
Q psy7639 903 HDVVLVGGSTRIPKVQSLLQNFFCGK---------SLNLSINPDEAVAYGAAVQAAI 950 (2568)
Q Consensus 903 ~~ViLvGGssriP~v~~~l~~~f~~~---------~v~~~~npdeaVA~GAAl~aa~ 950 (2568)
+.|+|+||+|++|.+.++|++.+... .+....+|..++-+||+++|..
T Consensus 291 ~~Ivl~GG~s~~~gl~~rl~~el~~~~~~~~~~~~~~~~~~~~~~~aw~G~si~as~ 347 (371)
T cd00012 291 SNIVLSGGSTLFPGFGERLQKELLKLAPPSKDTKVKVIAPPERKYSVWLGGSILASL 347 (371)
T ss_pred hCEEEeCCccCCcCHHHHHHHHHHHhCCcccceEEEEccCCCccccEEeCchhhcCc
Confidence 88999999999999999999887421 2334568899999999999865
No 71
>PRK13917 plasmid segregation protein ParM; Provisional
Probab=98.89 E-value=3.8e-08 Score=124.86 Aligned_cols=211 Identities=18% Similarity=0.242 Sum_probs=139.9
Q ss_pred ccceEE--EEecCCCCHHHH-HHHHHHHHHc------C------CceEEEEechhHHHHHhhcccc------ccCcceEE
Q psy7639 1504 SVRDAV--ITVPAYFNDAQR-QATKDAGAIA------G------LNVMRIVNEPTAAALAYGLDKN------LKGERNVL 1562 (2568)
Q Consensus 1504 ~~~~~V--iTVPa~f~~~qR-~~~~~Aa~~A------G------L~v~~li~EPtAAal~y~~~~~------~~~~~~vl 1562 (2568)
.+..++ ...|..+...++ +.+++..... | +..+.++.||.+|.+.+..+.. ......++
T Consensus 109 ~~~~v~l~tGLPv~~~~~~~~~~l~k~l~~~~~v~~~g~~~~I~i~~V~V~pQ~~ga~~~~~~~~~g~~~~~~~~~~~il 188 (344)
T PRK13917 109 EVVEVVVATGMPSEEIGTDKVAKFEKLLNKSRLIEINGIAVTINVKGVKVVAQPMGTLLDLYLDNDGVVADKAFEEGKVS 188 (344)
T ss_pred CcceeEEEEcCCHHHHHHHHHHHHHHHhcCceEEEECCEEEEEEEEEEEEecccHHHHHHHHhcccCcccchhcccCcEE
Confidence 345444 588988854553 6666654321 1 1346688999988887766432 12345789
Q ss_pred EEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhcccC
Q psy7639 1563 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLS 1642 (2568)
Q Consensus 1563 V~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls 1642 (2568)
|+|+|+||+|+++++ ++ .+ +...++....|..++.+.|++++..+ .++.. .++..+. +..+.-+..+.
T Consensus 189 vIDIG~~TtD~~v~~--~~-~~-~~~~s~s~~~G~~~~~~~I~~~i~~~---~~~~~--~~~~~ie---~~l~~g~i~~~ 256 (344)
T PRK13917 189 VIDFGSGTTDLDTIQ--NL-KR-VEEESFVIPKGTIDVYKRIASHISKK---EEGAS--ITPYMLE---KGLEYGACKLN 256 (344)
T ss_pred EEEcCCCcEEEEEEe--Cc-EE-cccccccccchHHHHHHHHHHHHHhh---CCCCC--CCHHHHH---HHHHcCcEEeC
Confidence 999999999999997 44 22 23333445589999999998887432 22222 2232222 22221111111
Q ss_pred CCCeeEEEEccccCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhc
Q psy7639 1643 SSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFC 1722 (2568)
Q Consensus 1643 ~~~~~~i~i~~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~ 1722 (2568)
.+.. +.+ ++++.++++++++++...+...+.+ ..++|.|+|+||++++ +++.|++.|+
T Consensus 257 -------------~~~~--id~-~~~~~~~~~~~~~~i~~~i~~~~~~----~~~~d~IiL~GGGA~l--l~~~lk~~f~ 314 (344)
T PRK13917 257 -------------QKTV--IDF-KDEFYKEQDSVIDEVMSGFEIAVGN----INSFDRVIVTGGGANI--FFDSLSHWYS 314 (344)
T ss_pred -------------CCce--Eeh-HHHHHHHHHHHHHHHHHHHHHHhcc----cCCCCEEEEECCcHHH--HHHHHHHHcC
Confidence 1111 122 4667789999999999999888864 3478999999999987 8999999995
Q ss_pred CCcccccCCchhhhhccHHHHHHHHhCC
Q psy7639 1723 GKSLNLSINPDEAVAYGAAVQAAILSGD 1750 (2568)
Q Consensus 1723 ~~~v~~~~nP~eAVA~GAai~a~~l~~~ 1750 (2568)
. +....||..|.|.|...+|..+.+.
T Consensus 315 ~--~~~~~~p~~ANa~G~~~~g~~~~~~ 340 (344)
T PRK13917 315 D--VEKADESQFANVRGYYKYGELLKNK 340 (344)
T ss_pred C--eEEcCChHHHHHHHHHHHHHHHhcc
Confidence 3 4567899999999999999877653
No 72
>smart00268 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Probab=98.85 E-value=1.2e-08 Score=132.35 Aligned_cols=239 Identities=18% Similarity=0.183 Sum_probs=150.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCC--CCCeEEEEEcCCCCHHHHHHHHHHH-HHcCCCeeeecchhHHHHHHhccccCCCCCc
Q psy7639 687 EEISSMVLTKMKETAEAYLGH--SVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGER 763 (2568)
Q Consensus 687 eev~a~iL~~L~~~ae~~~~~--~~~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~l~li~Ep~AAAl~y~~~~~~~~~~ 763 (2568)
-+....+++++... .++. .-..++||.|...+..+|+.+.+.+ +..|++.+.++++|.+|+++++ ..
T Consensus 74 ~~~~e~i~~~~~~~---~l~~~~~~~~vll~~p~~~~~~~r~~~~e~lfE~~~~~~v~~~~~~~~a~~~~g-------~~ 143 (373)
T smart00268 74 WDDMEKIWDYTFFN---ELRVEPEEHPVLLTEPPMNPKSNREKILEIMFETFNFPALYIAIQAVLSLYASG-------RT 143 (373)
T ss_pred HHHHHHHHHHHHhh---hcCCCCccCeeEEecCCCCCHHHHHHHHHHhhccCCCCeEEEeccHHHHHHhCC-------CC
Confidence 45566777777654 2332 2357899999999999999998887 5779999999999999999886 35
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHH
Q psy7639 764 NVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKR 843 (2568)
Q Consensus 764 ~vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~ 843 (2568)
+.+|+|+|+++++++.+. +|. -+........+||.++|+.|.+++...- .. . +.. .-...++.+|+
T Consensus 144 ~~lVVDiG~~~t~v~pv~--~G~--~~~~~~~~~~~GG~~l~~~l~~~l~~~~---~~--~--~~~---~~~~~~~~iKe 209 (373)
T smart00268 144 TGLVIDSGDGVTHVVPVV--DGY--VLPHAIKRIDIAGRDLTDYLKELLSERG---YQ--F--NSS---AEFEIVREIKE 209 (373)
T ss_pred EEEEEecCCCcceEEEEE--CCE--EchhhheeccCcHHHHHHHHHHHHHhcC---CC--C--CcH---HHHHHHHHhhh
Confidence 789999999999999886 452 2223333457999999999988876510 00 0 000 11223445555
Q ss_pred hcCCCC-----------------cceeeeccccCCcceEEecchHhH-HHHHHHH-----HHhHHHHHHHHHHHccCCc-
Q psy7639 844 TLSSST-----------------EASIEIDALYDGIDFYTKISRARF-EELCSDL-----FRSTLQPVEKALQDAKLDK- 899 (2568)
Q Consensus 844 ~LS~~~-----------------~~~i~i~~l~~~~d~~~~itr~ef-e~l~~~l-----~~~i~~~i~~~L~~a~~~~- 899 (2568)
.+..-. ...... .+.++..+.+...|-.. |.++.|- ...+.+.|.++|..+..+.
T Consensus 210 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~lpdg~~~~~~~er~~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r 288 (373)
T smart00268 210 KLCYVAEDFEKEMKKARESSESSKLEKTY-ELPDGNTIKVGNERFRIPEILFKPELIGLEQKGIHELVYESIQKCDIDVR 288 (373)
T ss_pred heeeecCChHHHHHHhhhcccccccceeE-ECCCCCEEEEChHHeeCchhcCCchhcCCCcCCHHHHHHHHHHhCCHhHH
Confidence 432210 000000 12234333332222221 2233331 2356777788887654321
Q ss_pred -cCcCeEEEEcCCCCcHHHHHHHHHHhCCc-------cccccCCchhHHHhhHHHHHHH
Q psy7639 900 -SAIHDVVLVGGSTRIPKVQSLLQNFFCGK-------SLNLSINPDEAVAYGAAVQAAI 950 (2568)
Q Consensus 900 -~~I~~ViLvGGssriP~v~~~l~~~f~~~-------~v~~~~npdeaVA~GAAl~aa~ 950 (2568)
.-.+.|+|+||+|++|.+.++|.+.+... .+..+.++..++=.||+++|..
T Consensus 289 ~~l~~nIvltGG~s~i~Gl~~RL~~el~~~~p~~~~v~v~~~~~~~~~~W~G~silas~ 347 (373)
T smart00268 289 KDLYENIVLSGGSTLIPGFGERLEKELKQLAPKKLKVKVIAPPERKYSVWLGGSILASL 347 (373)
T ss_pred HHHHhCeEeecccccCcCHHHHHHHHHHHhCCCCceeEEecCCCCccceEeCcccccCc
Confidence 22567999999999999999998877221 2333445667777788887754
No 73
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=98.77 E-value=2.2e-07 Score=117.43 Aligned_cols=207 Identities=18% Similarity=0.206 Sum_probs=126.3
Q ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHc---------CCcEEEEecchhHHHHhhccccc--cCCCceEEEEEeCCcceE
Q psy7639 135 SVRDAVITVPAYFNDAQRQATKDAGAIA---------GLNVMRIVNEPTAAALAYGLDKN--LKGERNVLIFDLGGGTFD 203 (2568)
Q Consensus 135 ~~~~~VITVPa~f~~~qr~al~~Aa~~A---------Gl~~~~li~Ep~AAAl~y~~~~~--~~~~~~vlV~D~GggT~D 203 (2568)
.+..+|+..|..+...+|+.+++..... -++.+.+++||.+|.+.+..+.. ......++|+|+|++|+|
T Consensus 101 ~~~~lv~GLP~~~~~~~k~~l~~~l~g~~~~~~~~~i~I~~V~V~PQ~~Ga~~~~~~~~~~~~~~~~~~lVIDIG~~TtD 180 (320)
T TIGR03739 101 EIDQLVVGLPVATLTTYKSALEKAVTGEHDIGAGKAVTVRKVLAVPQPQGALVHFVAQHGKLLTGKEQSLIIDPGYFTFD 180 (320)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHhccceecCCceEEEEEEEEEeCCChHHHHHHHhcCCCcccCcCcEEEEecCCCeee
Confidence 4567999999999999999998876532 23557889999999888765321 235667999999999999
Q ss_pred EEEeeecCCcEEEEEeecccccccccchHHHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCCCCceEEEEe
Q psy7639 204 VSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEID 283 (2568)
Q Consensus 204 vsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~~~~i~i~ 283 (2568)
+.+++ .+ .+ +....+....|-.++-+.+.+.+.++ ++.+...+...+.. + |..... +.+
T Consensus 181 ~~~~~--~~-~~-~~~~s~s~~~G~~~~~~~I~~~i~~~----~g~~~~~~~~~i~~---~-------l~~g~~--~~~- 239 (320)
T TIGR03739 181 WLVAR--GM-RL-VQKRSGSVNGGMSDIYRLLAAEISKD----IGTPAYRDIDRIDL---A-------LRTGKQ--PRI- 239 (320)
T ss_pred eehcc--CC-EE-cccccCCchhHHHHHHHHHHHHHHhh----cCCCCccCHHHHHH---H-------HHhCCc--eee-
Confidence 98774 23 22 33444445677666666665555444 44431112222221 1 111110 001
Q ss_pred eeccCcceEEeecHHHHHHHHhhhhhhhHHHHHHHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCc
Q psy7639 284 ALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINP 363 (2568)
Q Consensus 284 ~l~~~~d~~~~itR~efe~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~np 363 (2568)
.+.. +.|+ +.++ .....+++++..+.+.+. ...+++.|+|+||++. .+++.|++.|+...+....||
T Consensus 240 ---~gk~--~di~-~~~~-~~~~~~~~~v~~i~~~~~----~~~~~~~Iil~GGGa~--ll~~~l~~~f~~~~i~~~~dp 306 (320)
T TIGR03739 240 ---YQKP--VDIK-RCLE-LAETVAQQAVSTMMTWIG----APESIQNIVLVGGGAF--LFKKAVKAAFPKHRIVEVDEP 306 (320)
T ss_pred ---ccee--cCch-HHHH-HHHHHHHHHHHHHHHhcc----cCCcccEEEEeCCcHH--HHHHHHHHHCCCCeeEecCCc
Confidence 1111 1122 1122 223333444433333331 2346899999999998 567889999976555566899
Q ss_pred hhHHHhhHHHHH
Q psy7639 364 DEAVAYGAAVQA 375 (2568)
Q Consensus 364 deaVA~GAa~~a 375 (2568)
..|.|+|-..+|
T Consensus 307 ~~ANarG~~~~g 318 (320)
T TIGR03739 307 MFANVRGFQIAG 318 (320)
T ss_pred HHHHHHHHHHhh
Confidence 999999987765
No 74
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=98.56 E-value=1.4e-06 Score=110.26 Aligned_cols=223 Identities=17% Similarity=0.199 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHc---------CCceEEEEechhHHHHHhhcccc
Q psy7639 1484 EISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIA---------GLNVMRIVNEPTAAALAYGLDKN 1554 (2568)
Q Consensus 1484 ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~A---------GL~v~~li~EPtAAal~y~~~~~ 1554 (2568)
+-.++++..|.... . ..+..+|+..|..+...||+.+++...-. -+..+.++.||.+|.+.|..+..
T Consensus 85 ~~~~L~~~Al~~~~---~-~~~~~lv~GLP~~~~~~~k~~l~~~l~g~~~~~~~~~i~I~~V~V~PQ~~Ga~~~~~~~~~ 160 (320)
T TIGR03739 85 EYMALLRGALALSK---V-REIDQLVVGLPVATLTTYKSALEKAVTGEHDIGAGKAVTVRKVLAVPQPQGALVHFVAQHG 160 (320)
T ss_pred HHHHHHHHHHHHhc---C-CCCCEEEECCCHHHHHHHHHHHHHHhccceecCCceEEEEEEEEEeCCChHHHHHHHhcCC
Confidence 44455555543321 1 23567999999999999999999876531 23557789999998887765321
Q ss_pred --ccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHH
Q psy7639 1555 --LKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRT 1632 (2568)
Q Consensus 1555 --~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~ 1632 (2568)
.....+++|+|+||+|+|+.+++ ++ .. +...++....|-.++-+.|.+.+.++ ++.....+...+..
T Consensus 161 ~~~~~~~~~lVIDIG~~TtD~~~~~--~~-~~-~~~~s~s~~~G~~~~~~~I~~~i~~~----~g~~~~~~~~~i~~--- 229 (320)
T TIGR03739 161 KLLTGKEQSLIIDPGYFTFDWLVAR--GM-RL-VQKRSGSVNGGMSDIYRLLAAEISKD----IGTPAYRDIDRIDL--- 229 (320)
T ss_pred CcccCcCcEEEEecCCCeeeeehcc--CC-EE-cccccCCchhHHHHHHHHHHHHHHhh----cCCCCccCHHHHHH---
Confidence 12456789999999999998775 44 33 44555556688888888887776544 44431112222221
Q ss_pred HHHHhhcccCCCCeeEEEEccccCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChh
Q psy7639 1633 AAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPK 1712 (2568)
Q Consensus 1633 ~~E~aK~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~ 1712 (2568)
....-|... + .+... .|+ +.-+..+..+++++.-+.+.+. ...+++.|+|+||.+. .
T Consensus 230 ~l~~g~~~~---------~----~gk~~--di~--~~~~~~~~~~~~~v~~i~~~~~----~~~~~~~Iil~GGGa~--l 286 (320)
T TIGR03739 230 ALRTGKQPR---------I----YQKPV--DIK--RCLELAETVAQQAVSTMMTWIG----APESIQNIVLVGGGAF--L 286 (320)
T ss_pred HHHhCCcee---------e----cceec--Cch--HHHHHHHHHHHHHHHHHHHhcc----cCCcccEEEEeCCcHH--H
Confidence 111111100 0 11111 122 1112233333444433333332 2245889999999987 6
Q ss_pred HHHHHHhhhcCCcccccCCchhhhhccHHHHH
Q psy7639 1713 VQSLLQNFFCGKSLNLSINPDEAVAYGAAVQA 1744 (2568)
Q Consensus 1713 V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a 1744 (2568)
+++.|++.|+...+....||..|.|.|-..+|
T Consensus 287 l~~~l~~~f~~~~i~~~~dp~~ANarG~~~~g 318 (320)
T TIGR03739 287 FKKAVKAAFPKHRIVEVDEPMFANVRGFQIAG 318 (320)
T ss_pred HHHHHHHHCCCCeeEecCCcHHHHHHHHHHhh
Confidence 78999999976566567799999999976554
No 75
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton. These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....
Probab=98.53 E-value=9.4e-07 Score=115.80 Aligned_cols=247 Identities=19% Similarity=0.226 Sum_probs=146.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCHHHHHHHHHHH-HHcCCCeeeecchhHHHHHHhccccCCCCCceE
Q psy7639 687 EEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNV 765 (2568)
Q Consensus 687 eev~a~iL~~L~~~ae~~~~~~~~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~l~li~Ep~AAAl~y~~~~~~~~~~~v 765 (2568)
-+....+++++.... -.....-..++++.|..++..+|+.+.+.+ +..|+..+.++++|.+|+++++.. +-
T Consensus 73 ~~~~e~i~~~~~~~~-l~~~~~~~~vll~~~~~~~~~~r~~l~e~lfE~~~~~~v~~~~~~~~a~~~~g~~-------tg 144 (393)
T PF00022_consen 73 WDALEEIWDYIFSNL-LKVDPSDHPVLLTEPPFNPRSQREKLAEILFEKFGVPSVYFIPSPLLALYASGRT-------TG 144 (393)
T ss_dssp HHHHHHHHHHHHHTT-T-SSGGGSEEEEEESTT--HHHHHHHHHHHHHTS--SEEEEEEHHHHHHHHTTBS-------SE
T ss_pred ccccccccccccccc-cccccccceeeeeccccCCchhhhhhhhhhhcccccceeeeeecccccccccccc-------cc
Confidence 345566666665543 112233456999999999999999887665 577999999999999999988654 56
Q ss_pred EEEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHHH-H--hhhccC---CC-CCHHHHHHHHHHH
Q psy7639 766 LIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF-K--RKYKKD---MS-VNPRALRRLRTAA 838 (2568)
Q Consensus 766 lV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~-~--~~~~~~---~~-~~~~~~~~L~~~~ 838 (2568)
+|+|+|.+.+.|+-+- +|. -+........+||.++++.|.+.|..+- . ..+... .. ........-...+
T Consensus 145 lVVD~G~~~t~v~pV~--dG~--~~~~~~~~~~~GG~~lt~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (393)
T PF00022_consen 145 LVVDIGYSSTSVVPVV--DGY--VLPHSIKRSPIGGDDLTEYLKELLKERNIQINPSYLIKSKSPVEGESYNNSDDEEIV 220 (393)
T ss_dssp EEEEESSS-EEEEEEE--TTE--E-GGGBEEES-SHHHHHHHHHHHHHHT-SS--GCCCCCCHCCC-TCHHSSHHHHHHH
T ss_pred cccccceeeeeeeeee--ecc--ccccccccccccHHHHHHHHHHHHHhhccccccccccccccccccccccchhhhccc
Confidence 9999999999887663 562 2222233467999999999988887631 0 000000 00 0010001112223
Q ss_pred HHHHHhcC---------------CCCcceeeeccccCCcceEEecchHhHHHHHHHHHH----------------hHHHH
Q psy7639 839 ERAKRTLS---------------SSTEASIEIDALYDGIDFYTKISRARFEELCSDLFR----------------STLQP 887 (2568)
Q Consensus 839 E~aK~~LS---------------~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~l~~----------------~i~~~ 887 (2568)
+.+|+.+. ......+. +.++. .+.+..+.| .+.+.+|+ .+.+.
T Consensus 221 ~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~---lPdg~--~i~~~~er~-~~~E~LF~p~~~~~~~~~~~~~~~gL~~~ 294 (393)
T PF00022_consen 221 EEIKEECCYVSEDPDEEQEEQASENPEKSYE---LPDGQ--TIILGKERF-RIPEILFNPSLIGIDSASEPSEFMGLPEL 294 (393)
T ss_dssp HHHHHHHHSGGSSHHHHHHHHHCSTTTEEEE----TTSS--EEEESTHHH-HHHHTTTSGGGGTSSSTS---SSSCHHHH
T ss_pred hhccchhhhcccccccccccccccccceecc---ccccc--ccccccccc-cccccccccccccccccccccccchhhhh
Confidence 33333321 11122222 22443 445555444 23333333 46677
Q ss_pred HHHHHHHccCCccC--cCeEEEEcCCCCcHHHHHHHHHHhCC-------ccccccC-CchhHHHhhHHHHHHHH
Q psy7639 888 VEKALQDAKLDKSA--IHDVVLVGGSTRIPKVQSLLQNFFCG-------KSLNLSI-NPDEAVAYGAAVQAAIL 951 (2568)
Q Consensus 888 i~~~L~~a~~~~~~--I~~ViLvGGssriP~v~~~l~~~f~~-------~~v~~~~-npdeaVA~GAAl~aa~l 951 (2568)
|.+++..+..+... ...|+|+||+|++|.+.++|.+.+.. ..+.... +|..++=.||+++|..-
T Consensus 295 I~~si~~~~~d~r~~l~~nIvl~GG~S~i~G~~eRL~~eL~~~~~~~~~~~v~~~~~~~~~~aW~Ggsilasl~ 368 (393)
T PF00022_consen 295 ILDSISKCPIDLRKELLSNIVLTGGSSLIPGFKERLQQELRSLLPSSTKVKVIAPPSDRQFAAWIGGSILASLS 368 (393)
T ss_dssp HHHHHHTSTTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHSGTTSTEEEE--T-TTTSHHHHHHHHHHTSG
T ss_pred hhhhhhccccccccccccceEEecccccccchHHHHHHHhhhhhhccccceeccCchhhhhcccccceeeeccc
Confidence 77888776533221 57899999999999999999877632 2333344 79999999999998753
No 76
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton. These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....
Probab=98.53 E-value=1.3e-06 Score=114.44 Aligned_cols=246 Identities=19% Similarity=0.229 Sum_probs=146.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCHHHHHHHHHHH-HHcCCcEEEEecchhHHHHhhccccccCCCceEE
Q psy7639 115 EISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVL 193 (2568)
Q Consensus 115 el~a~~L~~l~~~ae~~l~~~~~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vl 193 (2568)
+....+|+++....- .....-..++++.|..++...|+.+.+.+ +..|+..+.++++|.+|+++++.. +-+
T Consensus 74 ~~~e~i~~~~~~~~l-~~~~~~~~vll~~~~~~~~~~r~~l~e~lfE~~~~~~v~~~~~~~~a~~~~g~~-------tgl 145 (393)
T PF00022_consen 74 DALEEIWDYIFSNLL-KVDPSDHPVLLTEPPFNPRSQREKLAEILFEKFGVPSVYFIPSPLLALYASGRT-------TGL 145 (393)
T ss_dssp HHHHHHHHHHHHTTT--SSGGGSEEEEEESTT--HHHHHHHHHHHHHTS--SEEEEEEHHHHHHHHTTBS-------SEE
T ss_pred ccccccccccccccc-ccccccceeeeeccccCCchhhhhhhhhhhcccccceeeeeecccccccccccc-------ccc
Confidence 344556666654421 11223356999999999999999887775 566999999999999999888655 569
Q ss_pred EEEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHHHHHHHHHHH-H--hhhcccCC----CCHHHHHHHHHHHH
Q psy7639 194 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF-K--RKYKKDMS----VNPRALRRLRTAAE 266 (2568)
Q Consensus 194 V~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~-~--~~~~~~~~----~~~~~~~~L~~~aE 266 (2568)
|+|+|.+.+.++-+- +|. -+........+||.++++.|.+.|.++- . ..+..... ...-....-...++
T Consensus 146 VVD~G~~~t~v~pV~--dG~--~~~~~~~~~~~GG~~lt~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (393)
T PF00022_consen 146 VVDIGYSSTSVVPVV--DGY--VLPHSIKRSPIGGDDLTEYLKELLKERNIQINPSYLIKSKSPVEGESYNNSDDEEIVE 221 (393)
T ss_dssp EEEESSS-EEEEEEE--TTE--E-GGGBEEES-SHHHHHHHHHHHHHHT-SS--GCCCCCCHCCC-TCHHSSHHHHHHHH
T ss_pred ccccceeeeeeeeee--ecc--ccccccccccccHHHHHHHHHHHHHhhccccccccccccccccccccccchhhhccch
Confidence 999999999888763 452 2222223367899999999988887731 0 00000000 00000001111223
Q ss_pred HHHHhc---------------CCCCceEEEEeeeccCcceEEeecHHHH---HHHHhhhhh------------hhHHHHH
Q psy7639 267 RAKRTL---------------SSSTEASIEIDALYDGIDFYTKISRARF---EELCSDLFR------------STLQPVE 316 (2568)
Q Consensus 267 ~aK~~L---------------S~~~~~~i~i~~l~~~~d~~~~itR~ef---e~l~~~l~~------------~i~~~i~ 316 (2568)
.+|+.+ +......+.+ .++. .+.+..+.| |-++.|... .+.+.|.
T Consensus 222 ~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~l---Pdg~--~i~~~~er~~~~E~LF~p~~~~~~~~~~~~~~~gL~~~I~ 296 (393)
T PF00022_consen 222 EIKEECCYVSEDPDEEQEEQASENPEKSYEL---PDGQ--TIILGKERFRIPEILFNPSLIGIDSASEPSEFMGLPELIL 296 (393)
T ss_dssp HHHHHHHSGGSSHHHHHHHHHCSTTTEEEE----TTSS--EEEESTHHHHHHHTTTSGGGGTSSSTS---SSSCHHHHHH
T ss_pred hccchhhhcccccccccccccccccceeccc---cccc--ccccccccccccccccccccccccccccccccchhhhhhh
Confidence 333221 1122233322 3444 455665555 334444321 5778888
Q ss_pred HHHHHcCCCCCC--CCeEEEcCCccchHHHHHHHHHHhCC-------CcccccC-CchhHHHhhHHHHHHH
Q psy7639 317 KALQDAKLDKSA--IHDVVLVGGSTRIPKVQSLLQNFFCG-------KSLNLSI-NPDEAVAYGAAVQAAI 377 (2568)
Q Consensus 317 ~~l~~a~~~~~~--i~~ViLvGG~sriP~v~~~l~~~f~~-------~~v~~~~-npdeaVA~GAa~~aa~ 377 (2568)
+++..+...... ...|+|+||+|++|.+.++|+..+.. ..+..+. +|..++=.||+++|..
T Consensus 297 ~si~~~~~d~r~~l~~nIvl~GG~S~i~G~~eRL~~eL~~~~~~~~~~~v~~~~~~~~~~aW~Ggsilasl 367 (393)
T PF00022_consen 297 DSISKCPIDLRKELLSNIVLTGGSSLIPGFKERLQQELRSLLPSSTKVKVIAPPSDRQFAAWIGGSILASL 367 (393)
T ss_dssp HHHHTSTTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHSGTTSTEEEE--T-TTTSHHHHHHHHHHTS
T ss_pred hhhhccccccccccccceEEecccccccchHHHHHHHhhhhhhccccceeccCchhhhhcccccceeeecc
Confidence 888887643222 68999999999999999999987732 1233344 7999999999999864
No 77
>TIGR01175 pilM type IV pilus assembly protein PilM. This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria.
Probab=98.49 E-value=1.7e-06 Score=111.46 Aligned_cols=164 Identities=15% Similarity=0.162 Sum_probs=114.5
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCceEEEEechhHHHHHhh-----ccccccCcc-eEEEEEeCCcceEEEEEEecCC
Q psy7639 1508 AVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG-----LDKNLKGER-NVLIFDLGGGTFDVSILSIDEG 1581 (2568)
Q Consensus 1508 ~ViTVPa~f~~~qR~~~~~Aa~~AGL~v~~li~EPtAAal~y~-----~~~~~~~~~-~vlV~D~GGGT~Dvsi~~~~~g 1581 (2568)
.++++| ....+.+.++++.|||++..+.-+|.|.+-.+. ... ..... .++++|+|++|++++++. +|
T Consensus 136 ~v~a~~----~~~v~~~~~~~~~aGl~~~~id~~~~Al~~~~~~~~~~~~~-~~~~~~~~~lvdiG~~~t~l~i~~--~g 208 (348)
T TIGR01175 136 LLAATR----KEVVDSRLHALKLAGLEPKVVDVESFALLRAWRLLGEQLAS-RTYRLTDAALVDIGATSSTLNLLH--PG 208 (348)
T ss_pred EEEEec----HHHHHHHHHHHHHcCCceEEEecHHHHHHHHHHHHHhhCcc-ccccCceEEEEEECCCcEEEEEEE--CC
Confidence 455554 456677889999999999999999999876663 111 11233 499999999999999998 67
Q ss_pred cEEEEEEecCCCCCChhHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccCCccee
Q psy7639 1582 ALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFY 1661 (2568)
Q Consensus 1582 ~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~~~~~ 1661 (2568)
. +..+.. -..||.+|++.|++.+ +.+ .+.||+.|+.-....
T Consensus 209 ~---~~~~r~-i~~G~~~i~~~i~~~~--------~~~-----------~~~Ae~~k~~~~~~~---------------- 249 (348)
T TIGR01175 209 R---MLFTRE-VPFGTRQLTSELSRAY--------GLN-----------PEEAGEAKQQGGLPL---------------- 249 (348)
T ss_pred e---EEEEEE-eechHHHHHHHHHHHc--------CCC-----------HHHHHHHHhcCCCCC----------------
Confidence 3 222222 3489999999887542 222 246777776432110
Q ss_pred eecCHHHHHHHHhHHHHHHHHHHHHHHHHc--CCCCccccEEEEecCccCChhHHHHHHhhhc
Q psy7639 1662 TKISRARFEELCSDLFRSTLQPVEKALQDA--KLDKSAIHDVVLVGGSTRIPKVQSLLQNFFC 1722 (2568)
Q Consensus 1662 ~~itr~~fe~l~~pli~~i~~~i~~~L~~a--~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~ 1722 (2568)
. .-.+++++.++++..-|.+.|+-. ......++.|+|+||.+++|.+.+.+++.|+
T Consensus 250 ---~--~~~~~~~~~~~~l~~eI~~~l~~~~~~~~~~~i~~I~LtGgga~~~gl~~~l~~~l~ 307 (348)
T TIGR01175 250 ---L--YDPEVLRRFKGELVDEIRRSLQFFTAQSGTNSLDGLVLAGGGATLSGLDAAIYQRLG 307 (348)
T ss_pred ---c--hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccceEEEECccccchhHHHHHHHHHC
Confidence 0 013456777777777777877533 2233458999999999999999999999994
No 78
>TIGR01175 pilM type IV pilus assembly protein PilM. This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria.
Probab=98.45 E-value=3.7e-06 Score=108.27 Aligned_cols=159 Identities=15% Similarity=0.182 Sum_probs=109.9
Q ss_pred CHHHHHHHHHHHHHcCCCeeeecchhHHHHHHhc-----cccCCCCCc-eEEEEEeCCceeEEEEEEEcCCcEEEEEeec
Q psy7639 721 NDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG-----LDKNLKGER-NVLIFDLGGGTFDVSILSIDEGALFEVRSTA 794 (2568)
Q Consensus 721 ~~~qr~al~~Aa~~AGl~~l~li~Ep~AAAl~y~-----~~~~~~~~~-~vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~ 794 (2568)
.....+.+.++++.||+++..+..+|.|.+-.+. ... ..... .++++|+|+++++++++. +|...- .
T Consensus 141 ~~~~v~~~~~~~~~aGl~~~~id~~~~Al~~~~~~~~~~~~~-~~~~~~~~~lvdiG~~~t~l~i~~--~g~~~~----~ 213 (348)
T TIGR01175 141 RKEVVDSRLHALKLAGLEPKVVDVESFALLRAWRLLGEQLAS-RTYRLTDAALVDIGATSSTLNLLH--PGRMLF----T 213 (348)
T ss_pred cHHHHHHHHHHHHHcCCceEEEecHHHHHHHHHHHHHhhCcc-ccccCceEEEEEECCCcEEEEEEE--CCeEEE----E
Confidence 3566778889999999999999999999876663 111 12233 499999999999999986 452222 2
Q ss_pred cCCCCccchHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHhcCCCCcceeeeccccCCcceEEecchHhHH
Q psy7639 795 GDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFE 874 (2568)
Q Consensus 795 gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~LS~~~~~~i~i~~l~~~~d~~~~itr~efe 874 (2568)
....+||.+|++.|.+.+. .+ ..+||+.|..-..... .-.
T Consensus 214 r~i~~G~~~i~~~i~~~~~--------~~-----------~~~Ae~~k~~~~~~~~---------------------~~~ 253 (348)
T TIGR01175 214 REVPFGTRQLTSELSRAYG--------LN-----------PEEAGEAKQQGGLPLL---------------------YDP 253 (348)
T ss_pred EEeechHHHHHHHHHHHcC--------CC-----------HHHHHHHHhcCCCCCc---------------------hhH
Confidence 2356899999988764331 11 2467777765322110 012
Q ss_pred HHHHHHHHhHHHHHHHHHHHc--cCCccCcCeEEEEcCCCCcHHHHHHHHHHhC
Q psy7639 875 ELCSDLFRSTLQPVEKALQDA--KLDKSAIHDVVLVGGSTRIPKVQSLLQNFFC 926 (2568)
Q Consensus 875 ~l~~~l~~~i~~~i~~~L~~a--~~~~~~I~~ViLvGGssriP~v~~~l~~~f~ 926 (2568)
+.+++.++++...|.+.|+-. ......++.|+|+||++++|.+.+.+++.|+
T Consensus 254 ~~~~~~~~~l~~eI~~~l~~~~~~~~~~~i~~I~LtGgga~~~gl~~~l~~~l~ 307 (348)
T TIGR01175 254 EVLRRFKGELVDEIRRSLQFFTAQSGTNSLDGLVLAGGGATLSGLDAAIYQRLG 307 (348)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCcccceEEEECccccchhHHHHHHHHHC
Confidence 356667777777777777532 2223359999999999999999999999995
No 79
>PTZ00280 Actin-related protein 3; Provisional
Probab=98.43 E-value=4.2e-06 Score=109.89 Aligned_cols=222 Identities=18% Similarity=0.182 Sum_probs=138.5
Q ss_pred HHHHHHHHHHHHHHHHHhCC--CCCeEEEEEcCCCCHHHHHHHHHHH-HHcCCCeeeecchhHHHHHHhccccCC---CC
Q psy7639 688 EISSMVLTKMKETAEAYLGH--SVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNL---KG 761 (2568)
Q Consensus 688 ev~a~iL~~L~~~ae~~~~~--~~~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~l~li~Ep~AAAl~y~~~~~~---~~ 761 (2568)
+....++.++... .+.. .-..+++|.|..++..+|+.+.+.+ +..+.+.+.+.++|.+|++++...... ..
T Consensus 82 d~~e~l~~~~~~~---~L~~~p~~~~vllte~~~~~~~~Re~l~e~lFE~~~~p~i~~~~~~~lslya~~~~~~~~~~~g 158 (414)
T PTZ00280 82 DLMEKFWEQCIFK---YLRCEPEEHYFILTEPPMNPPENREYTAEIMFETFNVKGLYIAVQAVLALRASWTSKKAKELGG 158 (414)
T ss_pred HHHHHHHHHHHHH---hhccCCCCCceEEeeCCCCcHHHHHHHHHHHhhccCCCeEEEecCHHHhHhhhcccccccccCC
Confidence 4555566664332 1222 2345899999999999999988776 555999999999999999987432211 12
Q ss_pred CceEEEEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHH
Q psy7639 762 ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERA 841 (2568)
Q Consensus 762 ~~~vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~a 841 (2568)
..+-||+|+|+|+++++-+. +|.. +.....-..+||.++++.|.+.|.+. +..+... ..+..++.+
T Consensus 159 ~~tglVVDiG~~~T~i~PV~--~G~~--l~~~~~~~~~GG~~lt~~L~~lL~~~-----~~~~~~~-----~~~~~~~~i 224 (414)
T PTZ00280 159 TLTGTVIDSGDGVTHVIPVV--DGYV--IGSSIKHIPLAGRDITNFIQQMLRER-----GEPIPAE-----DILLLAQRI 224 (414)
T ss_pred ceeEEEEECCCCceEEEEEE--CCEE--cccceEEecCcHHHHHHHHHHHHHHc-----CCCCCcH-----HHHHHHHHH
Confidence 34669999999999998764 4522 22222235789999999998887542 1111111 112235566
Q ss_pred HHhcCCCC-----------------cceeeeccccCCcceEEecchHhHH---HHHHHHH------HhHHHHHHHHHHHc
Q psy7639 842 KRTLSSST-----------------EASIEIDALYDGIDFYTKISRARFE---ELCSDLF------RSTLQPVEKALQDA 895 (2568)
Q Consensus 842 K~~LS~~~-----------------~~~i~i~~l~~~~d~~~~itr~efe---~l~~~l~------~~i~~~i~~~L~~a 895 (2568)
|+.+..-. ...+..+...++....+.|..+.|. -++.|-+ ..+.+.|.++|.++
T Consensus 225 Ke~~c~v~~d~~~e~~~~~~~~~~~~~~~~~~d~~~g~~~~i~l~~erf~~~E~LF~P~~~~~~~~~gl~e~i~~sI~~~ 304 (414)
T PTZ00280 225 KEKYCYVAPDIAKEFEKYDSDPKNHFKKYTAVNSVTKKPYTVDVGYERFLGPEMFFHPEIFSSEWTTPLPEVVDDAIQSC 304 (414)
T ss_pred HHhcCcccCcHHHHHHHhhcCcccccceEECCCCCCCCccEEEechHHhcCcccccChhhcCCccCCCHHHHHHHHHHhC
Confidence 66554211 0112222222233446677776664 3444422 14566777777766
Q ss_pred cCC--ccCcCeEEEEcCCCCcHHHHHHHHHHhC
Q psy7639 896 KLD--KSAIHDVVLVGGSTRIPKVQSLLQNFFC 926 (2568)
Q Consensus 896 ~~~--~~~I~~ViLvGGssriP~v~~~l~~~f~ 926 (2568)
..+ ..=.+.|+|+||+|.+|.+.++|++.+.
T Consensus 305 ~~d~r~~L~~nIvL~GG~s~~~Gf~eRL~~El~ 337 (414)
T PTZ00280 305 PIDCRRPLYKNIVLSGGSTMFKGFDKRLQRDVR 337 (414)
T ss_pred ChhhHHHHhhcEEEeCCcccCcCHHHHHHHHHH
Confidence 433 2226789999999999999999998773
No 80
>PTZ00280 Actin-related protein 3; Provisional
Probab=98.42 E-value=5.1e-06 Score=109.12 Aligned_cols=224 Identities=17% Similarity=0.142 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHH-HHcCCceEEEEechhHHHHHhhcccccc---Ccc
Q psy7639 1484 EISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLK---GER 1559 (2568)
Q Consensus 1484 ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa-~~AGL~v~~li~EPtAAal~y~~~~~~~---~~~ 1559 (2568)
+....+++++.... -........+++|.|..+...+|+.|.+.+ +..+..-+.++++|.+|++++....... ...
T Consensus 82 d~~e~l~~~~~~~~-L~~~p~~~~vllte~~~~~~~~Re~l~e~lFE~~~~p~i~~~~~~~lslya~~~~~~~~~~~g~~ 160 (414)
T PTZ00280 82 DLMEKFWEQCIFKY-LRCEPEEHYFILTEPPMNPPENREYTAEIMFETFNVKGLYIAVQAVLALRASWTSKKAKELGGTL 160 (414)
T ss_pred HHHHHHHHHHHHHh-hccCCCCCceEEeeCCCCcHHHHHHHHHHHhhccCCCeEEEecCHHHhHhhhcccccccccCCce
Confidence 34445666543221 011222456899999999999999887665 4458899999999999998864322110 223
Q ss_pred eEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhc
Q psy7639 1560 NVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKR 1639 (2568)
Q Consensus 1560 ~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~ 1639 (2568)
+-||+|+|.|+++|+-+- +|... .....-..+||.++|+.|.+.|.++ +..+. .. .....++..|+
T Consensus 161 tglVVDiG~~~T~i~PV~--~G~~l--~~~~~~~~~GG~~lt~~L~~lL~~~-----~~~~~--~~---~~~~~~~~iKe 226 (414)
T PTZ00280 161 TGTVIDSGDGVTHVIPVV--DGYVI--GSSIKHIPLAGRDITNFIQQMLRER-----GEPIP--AE---DILLLAQRIKE 226 (414)
T ss_pred eEEEEECCCCceEEEEEE--CCEEc--ccceEEecCcHHHHHHHHHHHHHHc-----CCCCC--cH---HHHHHHHHHHH
Confidence 569999999999999886 67322 1111223589999999999987542 11111 11 11233555555
Q ss_pred ccCCCC-----------------eeEEEEccccCCcceeeecCHHHHH---HHHhHHH------HHHHHHHHHHHHHcC-
Q psy7639 1640 TLSSST-----------------EASIEIDALYDGIDFYTKISRARFE---ELCSDLF------RSTLQPVEKALQDAK- 1692 (2568)
Q Consensus 1640 ~Ls~~~-----------------~~~i~i~~~~~~~~~~~~itr~~fe---~l~~pli------~~i~~~i~~~L~~a~- 1692 (2568)
.++... ......+...++....+.|..+.|. -+|+|-+ ..+.+.|.++|....
T Consensus 227 ~~c~v~~d~~~e~~~~~~~~~~~~~~~~~~d~~~g~~~~i~l~~erf~~~E~LF~P~~~~~~~~~gl~e~i~~sI~~~~~ 306 (414)
T PTZ00280 227 KYCYVAPDIAKEFEKYDSDPKNHFKKYTAVNSVTKKPYTVDVGYERFLGPEMFFHPEIFSSEWTTPLPEVVDDAIQSCPI 306 (414)
T ss_pred hcCcccCcHHHHHHHhhcCcccccceEECCCCCCCCccEEEechHHhcCcccccChhhcCCccCCCHHHHHHHHHHhCCh
Confidence 544211 0112333223344456677776663 4555532 145566666666542
Q ss_pred -CCCccccEEEEecCccCChhHHHHHHhhhc
Q psy7639 1693 -LDKSAIHDVVLVGGSTRIPKVQSLLQNFFC 1722 (2568)
Q Consensus 1693 -~~~~~Id~ViLVGGssr~P~V~~~I~~~f~ 1722 (2568)
+...=.+.|+|+||+|.+|.+.++|.+.+.
T Consensus 307 d~r~~L~~nIvL~GG~s~~~Gf~eRL~~El~ 337 (414)
T PTZ00280 307 DCRRPLYKNIVLSGGSTMFKGFDKRLQRDVR 337 (414)
T ss_pred hhHHHHhhcEEEeCCcccCcCHHHHHHHHHH
Confidence 222224569999999999999999988874
No 81
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A.
Probab=98.38 E-value=3.8e-06 Score=107.42 Aligned_cols=180 Identities=20% Similarity=0.279 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHcCCceEEEEechhHHHHHhhccc----cccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCC
Q psy7639 1519 AQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDK----NLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTH 1594 (2568)
Q Consensus 1519 ~qR~~~~~Aa~~AGL~v~~li~EPtAAal~y~~~~----~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~ 1594 (2568)
..-+...++++.|||++..+--+|-|.+-.|.... .......++++|+|..++.+.++. +|. ...+.. -.
T Consensus 136 ~~v~~~~~~~~~aGL~~~~vDv~~~Al~r~~~~~~~~~~~~~~~~~~~lvdiG~~~t~~~i~~--~g~---~~f~R~-i~ 209 (340)
T PF11104_consen 136 EIVESYVELFEEAGLKPVAVDVEAFALARLFEFLEPQLPDEEDAETVALVDIGASSTTVIIFQ--NGK---PIFSRS-IP 209 (340)
T ss_dssp HHHHHHHHHHHHTT-EEEEEEEHHHHGGGGGHHHHHTST----T-EEEEEEE-SS-EEEEEEE--TTE---EEEEEE-ES
T ss_pred HHHHHHHHHHHHcCCceEEEeehHHHHHHHHHHHHHhCCcccccceEEEEEecCCeEEEEEEE--CCE---EEEEEE-Ee
Confidence 44566788899999999888777777655554421 112346799999999999999998 773 232332 35
Q ss_pred CChhHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccCCcceeeecCHHHHHHHHh
Q psy7639 1595 LGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCS 1674 (2568)
Q Consensus 1595 lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~l~~ 1674 (2568)
.||.++++.|++.+.- + ..++|..|..-+ +..+...+.+.
T Consensus 210 ~G~~~l~~~i~~~~~i--------~-----------~~~Ae~~k~~~~---------------------l~~~~~~~~l~ 249 (340)
T PF11104_consen 210 IGGNDLTEAIARELGI--------D-----------FEEAEELKRSGG---------------------LPEEYDQDALR 249 (340)
T ss_dssp -SHHHHHHHHHHHTT---------------------HHHHHHHHHHT---------------------------HHHHHH
T ss_pred eCHHHHHHHHHHhcCC--------C-----------HHHHHHHHhcCC---------------------CCcchHHHHHH
Confidence 8999999999887321 1 235565555421 11133456677
Q ss_pred HHHHHHHHHHHHHHHH--cCCCCccccEEEEecCccCChhHHHHHHhhhcCC--------cccccC----------Cchh
Q psy7639 1675 DLFRSTLQPVEKALQD--AKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGK--------SLNLSI----------NPDE 1734 (2568)
Q Consensus 1675 pli~~i~~~i~~~L~~--a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~--------~v~~~~----------nP~e 1734 (2568)
+.++++..-|.+.|+- .......|+.|+|+||.+++|.+.+.+.+.++-. .+..+. .|..
T Consensus 250 ~~~~~l~~EI~rsl~~y~~~~~~~~i~~I~L~Ggga~l~gL~~~l~~~l~~~v~~~~p~~~~~~~~~~~~~~~~~~~~~~ 329 (340)
T PF11104_consen 250 PFLEELAREIRRSLDFYQSQSGGESIERIYLSGGGARLPGLAEYLSEELGIPVEVINPFKNIKLDPKINSEYLQEDAPQF 329 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHH------SEEEEESGGGGSTTHHHHHHHHHTSEEEE--GGGGSB--TTS-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEECCccchhhHHHHHHHHHCCceEEcChHHhCccCcccChhhhhhhhhHH
Confidence 7777777777777762 2334567999999999999999999999999422 111122 2678
Q ss_pred hhhccHHHHH
Q psy7639 1735 AVAYGAAVQA 1744 (2568)
Q Consensus 1735 AVA~GAai~a 1744 (2568)
+||+|.|+.+
T Consensus 330 avA~GLAlR~ 339 (340)
T PF11104_consen 330 AVALGLALRG 339 (340)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhhcC
Confidence 8999988764
No 82
>PTZ00452 actin; Provisional
Probab=98.37 E-value=6.4e-06 Score=106.28 Aligned_cols=233 Identities=17% Similarity=0.186 Sum_probs=143.7
Q ss_pred HHHHHHHHHHHHHHHhCC--CCCeEEEEecCCCCHHHHHHHHHHH-HHcCCcEEEEecchhHHHHhhccccccCCCceEE
Q psy7639 117 SSMVLTKMKETAEAYLGH--SVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVL 193 (2568)
Q Consensus 117 ~a~~L~~l~~~ae~~l~~--~~~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vl 193 (2568)
+..++.|+... .+.. .-..+++|-|..++..+|+.|.+.. +.-+...+.+.+.|.+++++++. .+-+
T Consensus 82 ~e~iw~~~f~~---~l~v~p~~~pvlitE~~~~~~~~Re~l~eilFE~~~vp~~~~~~~~~lslya~g~-------~tgl 151 (375)
T PTZ00452 82 IEIIWHHAFYN---ELCMSPEDQPVFMTDAPMNSKFNRERMTQIMFETFNTPCLYISNEAVLSLYTSGK-------TIGL 151 (375)
T ss_pred HHHHHHHHHHh---hcCCCcccCceeeecCCCCCHHHHHHHHHHHhhccCCceEEEechHHHHHHHCCC-------ceee
Confidence 34456555322 2222 2356899999999999999997775 55588889999999999987753 3579
Q ss_pred EEEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcC
Q psy7639 194 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLS 273 (2568)
Q Consensus 194 V~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS 273 (2568)
|+|+|.|.++++-+- +|. -+........+||.++++-|.+.|.++ +..+... .. +..++.+|+.+.
T Consensus 152 VVDiG~~~t~v~PV~--dG~--~l~~~~~r~~~gG~~lt~~L~~lL~~~-----~~~~~~~-~~----~~~~~~iKe~~c 217 (375)
T PTZ00452 152 VVDSGEGVTHCVPVF--EGH--QIPQAITKINLAGRLCTDYLTQILQEL-----GYSLTEP-HQ----RIIVKNIKERLC 217 (375)
T ss_pred eecCCCCcceEEEEE--CCE--EeccceEEeeccchHHHHHHHHHHHhc-----CCCCCCH-HH----HHHHHHHHHHhc
Confidence 999999999987663 452 222222335789999999888776432 1111111 00 112334444432
Q ss_pred CC--------------CceEEEEeeeccCcceEEeecHHHH---HHHHhhhh-----hhhHHHHHHHHHHcCCC--CCCC
Q psy7639 274 SS--------------TEASIEIDALYDGIDFYTKISRARF---EELCSDLF-----RSTLQPVEKALQDAKLD--KSAI 329 (2568)
Q Consensus 274 ~~--------------~~~~i~i~~l~~~~d~~~~itR~ef---e~l~~~l~-----~~i~~~i~~~l~~a~~~--~~~i 329 (2568)
.- ....... .+.+|. .+.+..+.| |-++.|-+ ..+.+++.+++..+... ..-.
T Consensus 218 ~v~~d~~~e~~~~~~~~~~~~~y-~LPDg~--~i~l~~er~~~~E~LF~P~~~g~~~~gi~~~i~~si~~c~~d~r~~L~ 294 (375)
T PTZ00452 218 YTALDPQDEKRIYKESNSQDSPY-KLPDGN--ILTIKSQKFRCSEILFQPKLIGLEVAGIHHLAYSSIKKCDLDLRQELC 294 (375)
T ss_pred cccCcHHHHHHHhhccCCcCceE-ECCCCC--EEEeehHHhcCcccccChhhcCCCCCChhHHHHHHHHhCCHhHHHHhh
Confidence 11 0001111 123443 356677766 34444432 24567777888776533 2227
Q ss_pred CeEEEcCCccchHHHHHHHHHHhCC-----Cc--ccccCCchhHHHhhHHHHHH
Q psy7639 330 HDVVLVGGSTRIPKVQSLLQNFFCG-----KS--LNLSINPDEAVAYGAAVQAA 376 (2568)
Q Consensus 330 ~~ViLvGG~sriP~v~~~l~~~f~~-----~~--v~~~~npdeaVA~GAa~~aa 376 (2568)
..|+|+||+|.+|.+.++|+..+.. .+ +..+.++..++=.|+++.|.
T Consensus 295 ~nIvL~GG~Sl~~Gf~~RL~~El~~~~p~~~~v~v~~~~~r~~~aW~GgSilas 348 (375)
T PTZ00452 295 RNIVLSGGTTLFPGIANRLSNELTNLVPSQLKIQVAAPPDRRFSAWIGGSIQCT 348 (375)
T ss_pred ccEEEecccccccCHHHHHHHHHHHhCCCCceeEEecCCCcceeEEECchhhcC
Confidence 7999999999999999999987722 11 22234555667778888775
No 83
>PTZ00281 actin; Provisional
Probab=98.36 E-value=3e-06 Score=109.66 Aligned_cols=217 Identities=18% Similarity=0.244 Sum_probs=138.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHH-HHcCCcEEEEecchhHHHHhhccccccCCCceEEEEEeCCcceEEEEeeecCCcEE
Q psy7639 137 RDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALF 215 (2568)
Q Consensus 137 ~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~ 215 (2568)
..+++|-|..+...+|+.|.+.+ +..++..+.+...|.+++++++. .+-+|+|+|.+.+.++-+- +|.
T Consensus 102 ~pvllte~~~~~~~~re~l~e~lFE~~~vp~~~~~~~~~ls~ya~g~-------~tglVVDiG~~~t~v~PV~--dG~-- 170 (376)
T PTZ00281 102 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-------TTGIVMDSGDGVSHTVPIY--EGY-- 170 (376)
T ss_pred CeEEEecCCCCcHHHHHHHHHHHhcccCCceeEeeccHHHHHHhcCC-------ceEEEEECCCceEEEEEEE--ecc--
Confidence 46888999999999999998754 66688999999999999987753 2679999999999887442 242
Q ss_pred EEEeecccccccccchHHHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCCCC------------ceEEEEe
Q psy7639 216 EVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSST------------EASIEID 283 (2568)
Q Consensus 216 ~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~------------~~~i~i~ 283 (2568)
.+........+||.++++.|.+.|..+ +..+.. ... +..++.+|+.+..-. .......
T Consensus 171 ~~~~~~~~~~~GG~~lt~~L~~lL~~~-----~~~~~~-~~~----~~~~~~iKe~~c~v~~d~~~~~~~~~~~~~~~~~ 240 (376)
T PTZ00281 171 ALPHAILRLDLAGRDLTDYMMKILTER-----GYSFTT-TAE----REIVRDIKEKLAYVALDFEAEMQTAASSSALEKS 240 (376)
T ss_pred cchhheeeccCcHHHHHHHHHHHHHhc-----CCCCCc-HHH----HHHHHHHHHhcEEecCCchHHHHhhhcCccccee
Confidence 222222235799999999888876442 111111 111 123455555533110 0001111
Q ss_pred -eeccCcceEEeecHHHH---HHHHhhhh-----hhhHHHHHHHHHHcCCCC--CCCCeEEEcCCccchHHHHHHHHHHh
Q psy7639 284 -ALYDGIDFYTKISRARF---EELCSDLF-----RSTLQPVEKALQDAKLDK--SAIHDVVLVGGSTRIPKVQSLLQNFF 352 (2568)
Q Consensus 284 -~l~~~~d~~~~itR~ef---e~l~~~l~-----~~i~~~i~~~l~~a~~~~--~~i~~ViLvGG~sriP~v~~~l~~~f 352 (2568)
.+.++.. +.|..+.| |.++.|-+ ..+.+.|.+++..+.... .-.+.|+|+||+|.+|.+.++|+..+
T Consensus 241 y~LPdg~~--i~i~~er~~~~E~LF~P~~~~~~~~gi~~~i~~sI~~~~~d~r~~L~~nIvl~GG~s~~~Gf~~RL~~El 318 (376)
T PTZ00281 241 YELPDGQV--ITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKEL 318 (376)
T ss_pred EECCCCCE--EEeeHHHeeCcccccChhhcCCCCCCHHHHHHHHHHhCChhHHHHHHhhccccCccccCcCHHHHHHHHH
Confidence 1234433 45665555 44555432 256677888887765332 22678999999999999999998877
Q ss_pred CCC-------cccccCCchhHHHhhHHHHHH
Q psy7639 353 CGK-------SLNLSINPDEAVAYGAAVQAA 376 (2568)
Q Consensus 353 ~~~-------~v~~~~npdeaVA~GAa~~aa 376 (2568)
... .+..+.++..++=+||++.|.
T Consensus 319 ~~~~p~~~~v~v~~~~~r~~~aW~Ggsilas 349 (376)
T PTZ00281 319 TALAPSTMKIKIIAPPERKYSVWIGGSILAS 349 (376)
T ss_pred HHhCCCCcceEEecCCCCceeEEECcccccC
Confidence 211 233344667788888888775
No 84
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A.
Probab=98.36 E-value=5.8e-06 Score=105.70 Aligned_cols=181 Identities=20% Similarity=0.292 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHcCCCeeeecchhHHHHHHhcccc-C---CCCCceEEEEEeCCceeEEEEEEEcCCcEEEEEeeccCC
Q psy7639 722 DAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDK-N---LKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDT 797 (2568)
Q Consensus 722 ~~qr~al~~Aa~~AGl~~l~li~Ep~AAAl~y~~~~-~---~~~~~~vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~ 797 (2568)
...-+...++++.|||++..+=-+|.|.+-.|.... . ......++++|+|+.++.++++. +|...-. ...
T Consensus 135 k~~v~~~~~~~~~aGL~~~~vDv~~~Al~r~~~~~~~~~~~~~~~~~~~lvdiG~~~t~~~i~~--~g~~~f~----R~i 208 (340)
T PF11104_consen 135 KEIVESYVELFEEAGLKPVAVDVEAFALARLFEFLEPQLPDEEDAETVALVDIGASSTTVIIFQ--NGKPIFS----RSI 208 (340)
T ss_dssp HHHHHHHHHHHHHTT-EEEEEEEHHHHGGGGGHHHHHTST----T-EEEEEEE-SS-EEEEEEE--TTEEEEE----EEE
T ss_pred HHHHHHHHHHHHHcCCceEEEeehHHHHHHHHHHHHHhCCcccccceEEEEEecCCeEEEEEEE--CCEEEEE----EEE
Confidence 345667788999999999888777777655443321 1 12346799999999999999986 4522222 235
Q ss_pred CCccchHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHhcCCCCcceeeeccccCCcceEEecchHhHHHHH
Q psy7639 798 HLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELC 877 (2568)
Q Consensus 798 ~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~LS~~~~~~i~i~~l~~~~d~~~~itr~efe~l~ 877 (2568)
..||.++++.|.+.+.-.+. +||..|..-+... +...+.+
T Consensus 209 ~~G~~~l~~~i~~~~~i~~~-------------------~Ae~~k~~~~l~~---------------------~~~~~~l 248 (340)
T PF11104_consen 209 PIGGNDLTEAIARELGIDFE-------------------EAEELKRSGGLPE---------------------EYDQDAL 248 (340)
T ss_dssp S-SHHHHHHHHHHHTT--HH-------------------HHHHHHHHT---------------------------HHHHH
T ss_pred eeCHHHHHHHHHHhcCCCHH-------------------HHHHHHhcCCCCc---------------------chHHHHH
Confidence 78999999998876543332 5566665422111 2234567
Q ss_pred HHHHHhHHHHHHHHHH--HccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCCc--------cccccC----------Cch
Q psy7639 878 SDLFRSTLQPVEKALQ--DAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGK--------SLNLSI----------NPD 937 (2568)
Q Consensus 878 ~~l~~~i~~~i~~~L~--~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~--------~v~~~~----------npd 937 (2568)
.+.++++...|++.++ ........|+.|+|+||++++|.+.+.|++.++-. .+..+. .|.
T Consensus 249 ~~~~~~l~~EI~rsl~~y~~~~~~~~i~~I~L~Ggga~l~gL~~~l~~~l~~~v~~~~p~~~~~~~~~~~~~~~~~~~~~ 328 (340)
T PF11104_consen 249 RPFLEELAREIRRSLDFYQSQSGGESIERIYLSGGGARLPGLAEYLSEELGIPVEVINPFKNIKLDPKINSEYLQEDAPQ 328 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH------SEEEEESGGGGSTTHHHHHHHHHTSEEEE--GGGGSB--TTS-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEECCccchhhHHHHHHHHHCCceEEcChHHhCccCcccChhhhhhhhhH
Confidence 7777777777777777 23334557999999999999999999999999421 111111 367
Q ss_pred hHHHhhHHHHH
Q psy7639 938 EAVAYGAAVQA 948 (2568)
Q Consensus 938 eaVA~GAAl~a 948 (2568)
.++|.|.|+++
T Consensus 329 ~avA~GLAlR~ 339 (340)
T PF11104_consen 329 FAVALGLALRG 339 (340)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhhcC
Confidence 88999999875
No 85
>PTZ00004 actin-2; Provisional
Probab=98.14 E-value=2.3e-05 Score=101.67 Aligned_cols=217 Identities=16% Similarity=0.179 Sum_probs=138.9
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHH-HHcCCcEEEEecchhHHHHhhccccccCCCceEEEEEeCCcceEEEEeeecCCcE
Q psy7639 136 VRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGAL 214 (2568)
Q Consensus 136 ~~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~ 214 (2568)
-..+++|-|..++..+|+.+.+.+ +..|+..+.++++|.+++++++. .+-+|+|+|+++++++-+- +|..
T Consensus 101 ~~pvllte~~~~~~~~r~~~~e~lFE~~~~~~~~~~~~~~ls~ya~g~-------~tglVVDiG~~~t~v~pV~--dG~~ 171 (378)
T PTZ00004 101 EHPVLLTEAPLNPKANREKMTQIMFETHNVPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVSHTVPIY--EGYS 171 (378)
T ss_pred cCcceeecCCCCcHHHHHHHHHHHHhhcCCceEEeeccHHHHHHhcCC-------ceEEEEECCCCcEEEEEEE--CCEE
Confidence 346789999999999998887765 56699999999999999988753 3569999999999997763 3522
Q ss_pred EEEEeecccccccccchHHHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCCC---------------CceE
Q psy7639 215 FEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSS---------------TEAS 279 (2568)
Q Consensus 215 ~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~---------------~~~~ 279 (2568)
+........+||.++++.|.+.|..+ +..+ ++... ..-++..|+.+..- ....
T Consensus 172 --l~~~~~~~~~GG~~lt~~L~~lL~~~-----~~~~--~~~~~---~~~~~~iKe~~c~v~~d~~~~~~~~~~~~~~~~ 239 (378)
T PTZ00004 172 --LPHAIHRLDVAGRDLTEYMMKILHER-----GTTF--TTTAE---KEIVRDIKEKLCYIALDFDEEMGNSAGSSDKYE 239 (378)
T ss_pred --eecceeeecccHHHHHHHHHHHHHhc-----CCCC--CcHHH---HHHHHHHhhcceeecCCHHHHHhhhhcCccccc
Confidence 22222235799999999888877432 1111 11111 11234444443210 0001
Q ss_pred EEEeeeccCcceEEeecHHHH---HHHHhhh------hhhhHHHHHHHHHHcCCCC--CCCCeEEEcCCccchHHHHHHH
Q psy7639 280 IEIDALYDGIDFYTKISRARF---EELCSDL------FRSTLQPVEKALQDAKLDK--SAIHDVVLVGGSTRIPKVQSLL 348 (2568)
Q Consensus 280 i~i~~l~~~~d~~~~itR~ef---e~l~~~l------~~~i~~~i~~~l~~a~~~~--~~i~~ViLvGG~sriP~v~~~l 348 (2568)
... .+.+|.. +.|..+.| |-+|.|- ...+.+.|.+++..+..+. .-...|+|+||+|.+|.+.++|
T Consensus 240 ~~y-~lPdg~~--i~l~~er~~~~E~LF~P~~~~~~~~~gi~~~i~~sI~~~~~d~r~~L~~nIvl~GG~s~~~Gf~~RL 316 (378)
T PTZ00004 240 ESY-ELPDGTI--ITVGSERFRCPEALFQPSLIGKEEPPGIHELTFQSINKCDIDIRKDLYGNIVLSGGTTMYRGLPERL 316 (378)
T ss_pred eEE-ECCCCCE--EEEcHHHeeCcccccChhhcCccccCChHHHHHHHHHhCChhHHHHHHhhEEeccchhcCcCHHHHH
Confidence 111 1234443 45666665 3466653 3456678888888775432 2267899999999999999999
Q ss_pred HHHhCCC-------cccccCCchhHHHhhHHHHHH
Q psy7639 349 QNFFCGK-------SLNLSINPDEAVAYGAAVQAA 376 (2568)
Q Consensus 349 ~~~f~~~-------~v~~~~npdeaVA~GAa~~aa 376 (2568)
+..+... .+..+.++..++=.||++.|.
T Consensus 317 ~~EL~~~~p~~~~~~v~~~~~~~~~aW~Ggsilas 351 (378)
T PTZ00004 317 TKELTTLAPSTMKIKVVAPPERKYSVWIGGSILSS 351 (378)
T ss_pred HHHHHHhCCCCccEEEecCCCCceeEEECcccccC
Confidence 9877311 223344566677778877764
No 86
>PTZ00004 actin-2; Provisional
Probab=98.11 E-value=2e-05 Score=102.22 Aligned_cols=233 Identities=17% Similarity=0.187 Sum_probs=144.2
Q ss_pred HHHHHHHHHHHHHHHHHhC--CCCCeEEEEEcCCCCHHHHHHHHHHH-HHcCCCeeeecchhHHHHHHhccccCCCCCce
Q psy7639 688 EISSMVLTKMKETAEAYLG--HSVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERN 764 (2568)
Q Consensus 688 ev~a~iL~~L~~~ae~~~~--~~~~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~l~li~Ep~AAAl~y~~~~~~~~~~~ 764 (2568)
+....++.++.. ..++ ..-..+++|-|..++..+|+.+.+.+ +..|+..+.+.++|.+|+++++. .+
T Consensus 81 d~~e~i~~~~~~---~~l~v~~~~~pvllte~~~~~~~~r~~~~e~lFE~~~~~~~~~~~~~~ls~ya~g~-------~t 150 (378)
T PTZ00004 81 DDMEKIWHHTFY---NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETHNVPAMYVAIQAVLSLYASGR-------TT 150 (378)
T ss_pred HHHHHHHHHHHH---hhcccCCccCcceeecCCCCcHHHHHHHHHHHHhhcCCceEEeeccHHHHHHhcCC-------ce
Confidence 445556666432 2232 23346789999999999998876665 66799999999999999988753 36
Q ss_pred EEEEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHh
Q psy7639 765 VLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRT 844 (2568)
Q Consensus 765 vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~ 844 (2568)
-+|+|+|.+.++++-+. +|. -+.......++||.++++.|.+.|... +..+. +... ...++..|+.
T Consensus 151 glVVDiG~~~t~v~pV~--dG~--~l~~~~~~~~~GG~~lt~~L~~lL~~~-----~~~~~--~~~~---~~~~~~iKe~ 216 (378)
T PTZ00004 151 GIVLDSGDGVSHTVPIY--EGY--SLPHAIHRLDVAGRDLTEYMMKILHER-----GTTFT--TTAE---KEIVRDIKEK 216 (378)
T ss_pred EEEEECCCCcEEEEEEE--CCE--EeecceeeecccHHHHHHHHHHHHHhc-----CCCCC--cHHH---HHHHHHHhhc
Confidence 79999999999887664 452 222333345799999999888877432 11111 1111 1123444444
Q ss_pred cCCC---------------C--cceeeeccccCCcceEEecchHhH---HHHHHHH------HHhHHHHHHHHHHHccCC
Q psy7639 845 LSSS---------------T--EASIEIDALYDGIDFYTKISRARF---EELCSDL------FRSTLQPVEKALQDAKLD 898 (2568)
Q Consensus 845 LS~~---------------~--~~~i~i~~l~~~~d~~~~itr~ef---e~l~~~l------~~~i~~~i~~~L~~a~~~ 898 (2568)
+... . ...+. +.+|..+ .+..+.| |-++.|- ...+.+.|.+++..+..+
T Consensus 217 ~c~v~~d~~~~~~~~~~~~~~~~~~y~---lPdg~~i--~l~~er~~~~E~LF~P~~~~~~~~~gi~~~i~~sI~~~~~d 291 (378)
T PTZ00004 217 LCYIALDFDEEMGNSAGSSDKYEESYE---LPDGTII--TVGSERFRCPEALFQPSLIGKEEPPGIHELTFQSINKCDID 291 (378)
T ss_pred ceeecCCHHHHHhhhhcCccccceEEE---CCCCCEE--EEcHHHeeCcccccChhhcCccccCChHHHHHHHHHhCChh
Confidence 3211 0 11111 3344433 3444443 2345553 234556777777765433
Q ss_pred --ccCcCeEEEEcCCCCcHHHHHHHHHHhCC-------ccccccCCchhHHHhhHHHHHH
Q psy7639 899 --KSAIHDVVLVGGSTRIPKVQSLLQNFFCG-------KSLNLSINPDEAVAYGAAVQAA 949 (2568)
Q Consensus 899 --~~~I~~ViLvGGssriP~v~~~l~~~f~~-------~~v~~~~npdeaVA~GAAl~aa 949 (2568)
..=...|+|+||+|.+|.+.++|+..+.. ..+..+.++..++=+||+++|.
T Consensus 292 ~r~~L~~nIvl~GG~s~~~Gf~~RL~~EL~~~~p~~~~~~v~~~~~~~~~aW~Ggsilas 351 (378)
T PTZ00004 292 IRKDLYGNIVLSGGTTMYRGLPERLTKELTTLAPSTMKIKVVAPPERKYSVWIGGSILSS 351 (378)
T ss_pred HHHHHHhhEEeccchhcCcCHHHHHHHHHHHhCCCCccEEEecCCCCceeEEECcccccC
Confidence 22267899999999999999999877632 1233344666777778888775
No 87
>PTZ00281 actin; Provisional
Probab=98.10 E-value=2.7e-05 Score=100.85 Aligned_cols=237 Identities=18% Similarity=0.216 Sum_probs=144.3
Q ss_pred HHHHHHHHHHHHHHHHHhCC--CCCeEEEEEcCCCCHHHHHHHHHH-HHHcCCCeeeecchhHHHHHHhccccCCCCCce
Q psy7639 688 EISSMVLTKMKETAEAYLGH--SVRDAVITVPAYFNDAQRQATKDA-GAIAGLNVMRIVNEPTAAALAYGLDKNLKGERN 764 (2568)
Q Consensus 688 ev~a~iL~~L~~~ae~~~~~--~~~~~VITVPa~f~~~qr~al~~A-a~~AGl~~l~li~Ep~AAAl~y~~~~~~~~~~~ 764 (2568)
+....++.++... .+.. .-..+++|-|..+...+|+.|.+. .+..+...+.+...|.+++++++. .+
T Consensus 81 d~~e~l~~~~f~~---~l~v~p~~~pvllte~~~~~~~~re~l~e~lFE~~~vp~~~~~~~~~ls~ya~g~-------~t 150 (376)
T PTZ00281 81 DDMEKIWHHTFYN---ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR-------TT 150 (376)
T ss_pred HHHHHHHHHHHHh---hccCCCccCeEEEecCCCCcHHHHHHHHHHHhcccCCceeEeeccHHHHHHhcCC-------ce
Confidence 3444555555432 2332 335688899999999999998775 466799999999999999988753 36
Q ss_pred EEEEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHh
Q psy7639 765 VLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRT 844 (2568)
Q Consensus 765 vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~ 844 (2568)
-+|+|+|.+.+.++-+. +|. .+........+||.++++.|.+.|... +..+.. . .. +..++.+|+.
T Consensus 151 glVVDiG~~~t~v~PV~--dG~--~~~~~~~~~~~GG~~lt~~L~~lL~~~-----~~~~~~-~-~~---~~~~~~iKe~ 216 (376)
T PTZ00281 151 GIVMDSGDGVSHTVPIY--EGY--ALPHAILRLDLAGRDLTDYMMKILTER-----GYSFTT-T-AE---REIVRDIKEK 216 (376)
T ss_pred EEEEECCCceEEEEEEE--ecc--cchhheeeccCcHHHHHHHHHHHHHhc-----CCCCCc-H-HH---HHHHHHHHHh
Confidence 79999999999876443 352 233333346799999999888776432 111111 0 11 1234555555
Q ss_pred cCCCC---c---------ceeeec-cccCCcceEEecchHhH---HHHHHHHH-----HhHHHHHHHHHHHccCCc--cC
Q psy7639 845 LSSST---E---------ASIEID-ALYDGIDFYTKISRARF---EELCSDLF-----RSTLQPVEKALQDAKLDK--SA 901 (2568)
Q Consensus 845 LS~~~---~---------~~i~i~-~l~~~~d~~~~itr~ef---e~l~~~l~-----~~i~~~i~~~L~~a~~~~--~~ 901 (2568)
+..-. . ...... .+.++.. +.|..+.| |-|++|-+ ..+.+.|.+++..+..+. .-
T Consensus 217 ~c~v~~d~~~~~~~~~~~~~~~~~y~LPdg~~--i~i~~er~~~~E~LF~P~~~~~~~~gi~~~i~~sI~~~~~d~r~~L 294 (376)
T PTZ00281 217 LAYVALDFEAEMQTAASSSALEKSYELPDGQV--ITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDL 294 (376)
T ss_pred cEEecCCchHHHHhhhcCcccceeEECCCCCE--EEeeHHHeeCcccccChhhcCCCCCCHHHHHHHHHHhCChhHHHHH
Confidence 43211 0 000000 1234433 34444443 34444422 135566677776654321 22
Q ss_pred cCeEEEEcCCCCcHHHHHHHHHHhCCc-------cccccCCchhHHHhhHHHHHHH
Q psy7639 902 IHDVVLVGGSTRIPKVQSLLQNFFCGK-------SLNLSINPDEAVAYGAAVQAAI 950 (2568)
Q Consensus 902 I~~ViLvGGssriP~v~~~l~~~f~~~-------~v~~~~npdeaVA~GAAl~aa~ 950 (2568)
.+.|+|+||+|.+|.+.++|+..+... ++..+.++..++=+||+++|+.
T Consensus 295 ~~nIvl~GG~s~~~Gf~~RL~~El~~~~p~~~~v~v~~~~~r~~~aW~Ggsilasl 350 (376)
T PTZ00281 295 YGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASL 350 (376)
T ss_pred HhhccccCccccCcCHHHHHHHHHHHhCCCCcceEEecCCCCceeEEECcccccCc
Confidence 568999999999999999998776221 2333456677888899888863
No 88
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function. It has been shown in Salmonella enterica that srfB is one of the genes activated by the global signal transduction/regulatory system SsrA/B []. This activation takes place within eukaryotic cells. The activated genes include pathogenicity island 2 (SPI-2) genes and at least 10 other genes (srfB is one of them) which are believed to be horizontally acquired, and to be involved in virulence/pathogenicity [].
Probab=98.08 E-value=0.00031 Score=95.72 Aligned_cols=333 Identities=19% Similarity=0.254 Sum_probs=192.9
Q ss_pred ccccccccchhhhhHHHHhhhcCCCcccccccccc--------ccccCChhhhhc----ccccccE-EeeCCCCCceeE-
Q psy7639 1406 LTESEKSRCREECDAAKNQVAMNPKNTVFDAKRLI--------GRKFDDPKIQQD----MKHWPFT-VVNDCSKPKIQV- 1471 (2568)
Q Consensus 1406 ~tPS~v~~~~~~G~~A~~~~~~~p~~tv~~~k~~i--------g~~~~d~~~~~~----~k~~~~~-~~~~~~~~~~~v- 1471 (2568)
.=||.|....+-+.-|..+..+.....+++.||++ |.+|+......+ ....||. .++..+.+-+.+
T Consensus 325 ~WPSivRVG~EA~RLa~~r~GtEg~TGlSSPKRYLWDe~~~~q~WRFn~~~~~~~~eP~ata~p~~~liN~~G~~L~~l~ 404 (1002)
T PF07520_consen 325 VWPSIVRVGPEAARLASQRRGTEGSTGLSSPKRYLWDERPYEQGWRFNSAYVKSQNEPLATAAPFTNLINDDGQPLYQLD 404 (1002)
T ss_pred cCCCcceecHHHHHHHHHhcCCccccCCCCchhhccCCCccCCCcccCCCCCCCccCchhhhHHHHHhhcccCcchhhhc
Confidence 34777766444444444445566788899999988 444432211000 1112221 123334443333
Q ss_pred E----ecCCccccCHHHHHHHHHHHHHHHHHHHhCCc--------------cceEEEEecCCCCHHHHHHHHHHHHHc--
Q psy7639 1472 E----FKGERKTFAPEEISSMVLTKMKETAEAYLGHS--------------VRDAVITVPAYFNDAQRQATKDAGAIA-- 1531 (2568)
Q Consensus 1472 ~----~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~--------------~~~~ViTVPa~f~~~qR~~~~~Aa~~A-- 1531 (2568)
. ...-...||=..+..+.|..+..+|--+.+.+ ..++++|||.......|+.++++++.|
T Consensus 405 ~~~~r~pvf~p~ySRSSLMtfML~EiL~QAL~QINSpa~R~r~~~~~~PR~LR~IILT~P~AMPk~Er~ifr~r~~~Ai~ 484 (1002)
T PF07520_consen 405 PEDERLPVFSPHYSRSSLMTFMLSEILAQALMQINSPAQRLRRGHSDAPRRLRRIILTLPPAMPKPEREIFRRRMEEAIG 484 (1002)
T ss_pred CccccCccccccccHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccCCCChhhhheeEECCCCCCHHHHHHHHHHHHHHHH
Confidence 1 11123456667778888888888777766543 446999999999999999999888776
Q ss_pred ------CC---------------------ceEEEEechhHHHHHhhccc------------------c---------ccC
Q psy7639 1532 ------GL---------------------NVMRIVNEPTAAALAYGLDK------------------N---------LKG 1557 (2568)
Q Consensus 1532 ------GL---------------------~v~~li~EPtAAal~y~~~~------------------~---------~~~ 1557 (2568)
|. ++..=-+|.||.-+.|.... . ...
T Consensus 485 LvWk~lGw~~~~~~~~~~~~~~~~~~~~P~v~~~WDEATC~QlVyLYnE~~~~fgG~~~~FF~~~~rp~~~~~~~~~~~~ 564 (1002)
T PF07520_consen 485 LVWKALGWHPWDDDFDTNKDREKSWVPLPEVQMEWDEATCGQLVYLYNEIQVKFGGRAEEFFALMARPDRQPAPGEDPGP 564 (1002)
T ss_pred HHHHHcCCCCCCCCcccccccccccCCCCceeEEeecceeeeeeehhHHHHHHcCCCHHHHHHHhcCCCccccccCCCCC
Confidence 42 22233477777665554421 0 111
Q ss_pred cceEEEEEeCCcceEEEEEEec----CCcEEEEE----EecCCCCCChhHHHHHHHH-HHHHHHHhh-------------
Q psy7639 1558 ERNVLIFDLGGGTFDVSILSID----EGALFEVR----STAGDTHLGGEDFDNRLVS-HLAEEFKRK------------- 1615 (2568)
Q Consensus 1558 ~~~vlV~D~GGGT~Dvsi~~~~----~g~~~ev~----~~~gd~~lGG~d~D~~l~~-~l~~~~~~~------------- 1615 (2568)
.-+|.-+|+||||+|..|-... .|....+. .-.|-. ..|+|+-..+.+ +++-.+.+.
T Consensus 565 slriASIDIGGGTTDL~It~Y~ld~G~g~nv~I~P~q~FReGFk-vAGDDiLldVI~~~VlPal~~aL~~aG~~~~~~ll 643 (1002)
T PF07520_consen 565 SLRIASIDIGGGTTDLMITQYRLDDGQGSNVKITPEQLFREGFK-VAGDDILLDVIQRIVLPALQQALKKAGVADPRALL 643 (1002)
T ss_pred ceEEEEEecCCCcceeeEEEEEeccCCcceeEECcchhhhhhcc-cccHHHHHHHHHHHhHHHHHHHHHHhcccCHHHHH
Confidence 2457889999999999997664 33333332 223433 567777665554 444333322
Q ss_pred ---hcCCCCCCH-H-------------HHHHHHHHHHHhhcccCCCCeeEEEE--------------c----------cc
Q psy7639 1616 ---YKKDMSVNP-R-------------ALRRLRTAAERAKRTLSSSTEASIEI--------------D----------AL 1654 (2568)
Q Consensus 1616 ---~~~~~~~~~-~-------------~~~~L~~~~E~aK~~Ls~~~~~~i~i--------------~----------~~ 1654 (2568)
+|.+-.... + ....++.+||+.=..-. .......+ . ..
T Consensus 644 ~~LfG~dg~~~~~~~lRqQ~~lQv~~Pi~l~iL~~yE~~d~~~~-~~~~~~~f~ell~~~~Pt~~vl~yi~~~~~~~~~~ 722 (1002)
T PF07520_consen 644 SRLFGGDGQSDQDRVLRQQFTLQVFIPIGLAILKAYENYDPLDP-SAEIDATFGELLEREPPTAAVLDYINEEVRRLPAG 722 (1002)
T ss_pred HHHhCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CccccccHHHhcCCcCCcHHHHHHHHHHHhhcCCC
Confidence 222200000 0 01135566665321100 00000000 0 00
Q ss_pred ---cCCcceeeecCHHHHHHHHh---HHHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcCC----
Q psy7639 1655 ---YDGIDFYTKISRARFEELCS---DLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGK---- 1724 (2568)
Q Consensus 1655 ---~~~~~~~~~itr~~fe~l~~---pli~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~---- 1724 (2568)
.+-.++.+.++.+++...+- -.|.+++..+-+++...+ +|-++|+|--|++|.||..+++..+-.
T Consensus 723 ~~~Fdildv~l~i~~~~l~~~~~~~r~~i~~~L~~LcEvv~~Y~-----CDVLLLTGRPSrlPgvqalfr~~~pvPp~RI 797 (1002)
T PF07520_consen 723 APDFDILDVPLEIDLEKLHAAFLSDRMVICKTLRALCEVVHHYD-----CDVLLLTGRPSRLPGVQALFRHLLPVPPDRI 797 (1002)
T ss_pred CCCcceecceEEEcHHHHHHHHHhCcccHHHHHHHHHHHHHHhC-----CCEEEEcCCccccHHHHHHHHHhCCCCcccE
Confidence 01123356789999988774 677788887788887765 567999999999999999999986311
Q ss_pred ---------------cccccCCchhhhhccHHHHHH
Q psy7639 1725 ---------------SLNLSINPDEAVAYGAAVQAA 1745 (2568)
Q Consensus 1725 ---------------~v~~~~nP~eAVA~GAai~a~ 1745 (2568)
...+--||...||.||.+..-
T Consensus 798 v~l~~Y~tg~WYPF~~~~rI~dPKTTaaVGAmLc~L 833 (1002)
T PF07520_consen 798 VPLHGYRTGNWYPFNDQGRIDDPKTTAAVGAMLCLL 833 (1002)
T ss_pred EecCCeeecccccCCCCCcCCCchHHHHHHHHHHHH
Confidence 111345899999999987763
No 89
>PTZ00466 actin-like protein; Provisional
Probab=98.00 E-value=6.9e-05 Score=96.92 Aligned_cols=236 Identities=15% Similarity=0.164 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCHHHHHHHHHHH-HHcCCCeeeecchhHHHHHHhccccCCCCCceEE
Q psy7639 688 EISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVL 766 (2568)
Q Consensus 688 ev~a~iL~~L~~~ae~~~~~~~~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~l~li~Ep~AAAl~y~~~~~~~~~~~vl 766 (2568)
+....+++++.+.. .....-..+++|-|..++..+|+.|.+.+ +..++..+.+.+.|.+|+++++. .+-+
T Consensus 87 d~~e~iw~~~f~~l--~v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~p~~~~~~~~~lsl~a~g~-------~tgl 157 (380)
T PTZ00466 87 NDMENIWIHVYNSM--KINSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNVPALFISIQAILSLYSCGK-------TNGT 157 (380)
T ss_pred HHHHHHHHHHHhhc--ccCCccCeEEEecCccccHHHHHHHHHHHhccCCCCeEEEecchHHHHHhcCC-------ceEE
Confidence 44555555554321 11223446888999999999999986665 66788999999999999988753 3679
Q ss_pred EEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHhcC
Q psy7639 767 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLS 846 (2568)
Q Consensus 767 V~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~LS 846 (2568)
|+|+|.+.+.++-+- +|. .+........+||.++++-|.+.+.+. +..... .. -+..++.+|+.+.
T Consensus 158 VVD~G~~~t~v~PV~--~G~--~~~~~~~~~~~GG~~lt~~L~~lL~~~-----~~~~~~--~~---~~~~v~~iKe~~c 223 (380)
T PTZ00466 158 VLDCGDGVCHCVSIY--EGY--SITNTITRTDVAGRDITTYLGYLLRKN-----GHLFNT--SA---EMEVVKNMKENCC 223 (380)
T ss_pred EEeCCCCceEEEEEE--CCE--EeecceeEecCchhHHHHHHHHHHHhc-----CCCCCc--HH---HHHHHHHHHHhCe
Confidence 999999999886553 562 223333335799999999888776431 111110 01 1122344555432
Q ss_pred CC-------------CcceeeeccccCCcceEEecchHhH---HHHHHHHH-----HhHHHHHHHHHHHccCC--ccCcC
Q psy7639 847 SS-------------TEASIEIDALYDGIDFYTKISRARF---EELCSDLF-----RSTLQPVEKALQDAKLD--KSAIH 903 (2568)
Q Consensus 847 ~~-------------~~~~i~i~~l~~~~d~~~~itr~ef---e~l~~~l~-----~~i~~~i~~~L~~a~~~--~~~I~ 903 (2568)
.- ....... .+.+|.. +.|..+.| |-++.|-+ ..+.+.|.+.+.++..+ +.=..
T Consensus 224 ~v~~d~~~e~~~~~~~~~~~~y-~LPdg~~--i~l~~er~~~~E~LF~P~~~g~~~~gl~~~i~~sI~~c~~d~r~~L~~ 300 (380)
T PTZ00466 224 YVSFNMNKEKNSSEKALTTLPY-ILPDGSQ--ILIGSERYRAPEVLFNPSILGLEYLGLSELIVTSITRADMDLRRTLYS 300 (380)
T ss_pred EecCChHHHHhhccccccceeE-ECCCCcE--EEEchHHhcCcccccCccccCCCCCCHHHHHHHHHHhCChhhHHHHhh
Confidence 10 0000111 1234433 34555555 33444421 13456666666665433 22267
Q ss_pred eEEEEcCCCCcHHHHHHHHHHhCCc-------cccccCCchhHHHhhHHHHHH
Q psy7639 904 DVVLVGGSTRIPKVQSLLQNFFCGK-------SLNLSINPDEAVAYGAAVQAA 949 (2568)
Q Consensus 904 ~ViLvGGssriP~v~~~l~~~f~~~-------~v~~~~npdeaVA~GAAl~aa 949 (2568)
.|+|+||+|.+|.+.++|+..+... .+..+.++..++=+||+++|+
T Consensus 301 nIvL~GG~Sl~~Gf~~RL~~EL~~l~p~~~~v~v~~~~~r~~~aW~GgSilas 353 (380)
T PTZ00466 301 HIVLSGGTTMFHGFGDRLLNEIRKFAPKDITIRISAPPERKFSTFIGGSILAS 353 (380)
T ss_pred cEEEeCCccccCCHHHHHHHHHHHhCCCCceEEEecCCCCceeEEECchhhcC
Confidence 8999999999999999998877321 123334556677778888875
No 90
>PTZ00466 actin-like protein; Provisional
Probab=97.99 E-value=6.9e-05 Score=96.94 Aligned_cols=235 Identities=15% Similarity=0.159 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCHHHHHHHHHHH-HHcCCcEEEEecchhHHHHhhccccccCCCceEEE
Q psy7639 116 ISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLI 194 (2568)
Q Consensus 116 l~a~~L~~l~~~ae~~l~~~~~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV 194 (2568)
....++.|+.+... ....-..+++|-|+.++..+|+.|.+.+ +.-++..+.+.+.|.+|+++++. .+-+|
T Consensus 88 ~~e~iw~~~f~~l~--v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~p~~~~~~~~~lsl~a~g~-------~tglV 158 (380)
T PTZ00466 88 DMENIWIHVYNSMK--INSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNVPALFISIQAILSLYSCGK-------TNGTV 158 (380)
T ss_pred HHHHHHHHHHhhcc--cCCccCeEEEecCccccHHHHHHHHHHHhccCCCCeEEEecchHHHHHhcCC-------ceEEE
Confidence 44555666543211 1222346888999999999999987765 55688889999999999988754 36799
Q ss_pred EEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCC
Q psy7639 195 FDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSS 274 (2568)
Q Consensus 195 ~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~ 274 (2568)
+|+|.+.+.++-+- +|.. +........+||.++++-|.+.|.++ +.... ... -+..++..|+.+..
T Consensus 159 VD~G~~~t~v~PV~--~G~~--~~~~~~~~~~GG~~lt~~L~~lL~~~-----~~~~~--~~~---~~~~v~~iKe~~c~ 224 (380)
T PTZ00466 159 LDCGDGVCHCVSIY--EGYS--ITNTITRTDVAGRDITTYLGYLLRKN-----GHLFN--TSA---EMEVVKNMKENCCY 224 (380)
T ss_pred EeCCCCceEEEEEE--CCEE--eecceeEecCchhHHHHHHHHHHHhc-----CCCCC--cHH---HHHHHHHHHHhCeE
Confidence 99999999986553 3522 22222235799999999888876432 11111 000 11223445544321
Q ss_pred -------------CCceEEEEeeeccCcceEEeecHHHH---HHHHhhhh-----hhhHHHHHHHHHHcCCCC--CCCCe
Q psy7639 275 -------------STEASIEIDALYDGIDFYTKISRARF---EELCSDLF-----RSTLQPVEKALQDAKLDK--SAIHD 331 (2568)
Q Consensus 275 -------------~~~~~i~i~~l~~~~d~~~~itR~ef---e~l~~~l~-----~~i~~~i~~~l~~a~~~~--~~i~~ 331 (2568)
........ .+.+|. .+.|..+.| |-+|.|-+ ..+.+.|.+.+..+..+. .-...
T Consensus 225 v~~d~~~e~~~~~~~~~~~~y-~LPdg~--~i~l~~er~~~~E~LF~P~~~g~~~~gl~~~i~~sI~~c~~d~r~~L~~n 301 (380)
T PTZ00466 225 VSFNMNKEKNSSEKALTTLPY-ILPDGS--QILIGSERYRAPEVLFNPSILGLEYLGLSELIVTSITRADMDLRRTLYSH 301 (380)
T ss_pred ecCChHHHHhhccccccceeE-ECCCCc--EEEEchHHhcCcccccCccccCCCCCCHHHHHHHHHHhCChhhHHHHhhc
Confidence 00011111 123443 345666666 44555532 245677888887775432 22789
Q ss_pred EEEcCCccchHHHHHHHHHHhCCC-----c--ccccCCchhHHHhhHHHHHH
Q psy7639 332 VVLVGGSTRIPKVQSLLQNFFCGK-----S--LNLSINPDEAVAYGAAVQAA 376 (2568)
Q Consensus 332 ViLvGG~sriP~v~~~l~~~f~~~-----~--v~~~~npdeaVA~GAa~~aa 376 (2568)
|+|+||+|.+|.+.++|+..+... + +..+.++..++=+||+++|.
T Consensus 302 IvL~GG~Sl~~Gf~~RL~~EL~~l~p~~~~v~v~~~~~r~~~aW~GgSilas 353 (380)
T PTZ00466 302 IVLSGGTTMFHGFGDRLLNEIRKFAPKDITIRISAPPERKFSTFIGGSILAS 353 (380)
T ss_pred EEEeCCccccCCHHHHHHHHHHHhCCCCceEEEecCCCCceeEEECchhhcC
Confidence 999999999999999999887321 1 22234556667778887775
No 91
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA []. They are involved in the control of plasmid partition and required for the accurate segregation of the plasmid. ; PDB: 3IKY_C 3IKU_I 2ZGZ_B 1MWM_A 1MWK_A 2ZHC_A 2ZGY_A 2QU4_A.
Probab=97.98 E-value=3.7e-05 Score=97.13 Aligned_cols=174 Identities=17% Similarity=0.292 Sum_probs=97.9
Q ss_pred ceEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHH
Q psy7639 1534 NVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFK 1613 (2568)
Q Consensus 1534 ~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~ 1613 (2568)
..+.++.||-||.+.+..+. .....+||+|+||+|+|++++. ++ ...+...+|...+|-..+-+.+.+.|...
T Consensus 141 ~~V~V~PQ~~~A~~~~~~~~--~~~~~~lVVDIGG~T~Dv~~v~--~~-~~~~~~~~~~~~~Gvs~~~~~I~~~l~~~-- 213 (318)
T PF06406_consen 141 KDVEVFPQSVGAVFDALMDL--DEDESVLVVDIGGRTTDVAVVR--GG-LPDISKCSGTPEIGVSDLYDAIAQALRSA-- 213 (318)
T ss_dssp EEEEEEESSHHHHHHHHHTS---TTSEEEEEEE-SS-EEEEEEE--GG-G--EEEEEEETTSSTHHHHHHHHHHTT----
T ss_pred eeEEEEcccHHHHHHHHHhh--cccCcEEEEEcCCCeEEeeeec--CC-ccccchhccCCchhHHHHHHHHHHHHHHh--
Confidence 56678999999988876552 3346799999999999999997 32 22344455656789888888887775431
Q ss_pred hhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Q psy7639 1614 RKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKL 1693 (2568)
Q Consensus 1614 ~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~a~~ 1693 (2568)
+... +......+.. .+..- .. +...... .=..+++.++++..++++.+-|.+.+.+
T Consensus 214 ---~~~~--s~~~~~~ii~----~~~~~-----~~--~~~~i~~-----~~~~~~v~~~i~~~~~~l~~~i~~~~~~--- 269 (318)
T PF06406_consen 214 ---GIDT--SELQIDDIIR----NRKDK-----GY--LRQVIND-----EDVIDDVSEVIEEAVEELINRILRELGD--- 269 (318)
T ss_dssp ---SBHH--HHHHHHHHHH----TTT-H-----HH--HHHHSSS-----HHHHHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred ---cCCC--cHHHHHHHHH----hhhcc-----ce--ecccccc-----hhhHHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 1100 0011111111 00000 00 0000000 0113344455555555555555555543
Q ss_pred CCccccEEEEecCccCChhHHHHHHhhhc--CCcccccCCchhhhhccHH
Q psy7639 1694 DKSAIHDVVLVGGSTRIPKVQSLLQNFFC--GKSLNLSINPDEAVAYGAA 1741 (2568)
Q Consensus 1694 ~~~~Id~ViLVGGssr~P~V~~~I~~~f~--~~~v~~~~nP~eAVA~GAa 1741 (2568)
..+++.|+||||.+ .++.+.|++.|+ ...+...-||..|-|.|-+
T Consensus 270 -~~~~~~I~~vGGGA--~ll~~~Ik~~~~~~~~~i~i~~~pqfAnv~G~~ 316 (318)
T PF06406_consen 270 -FSDIDRIFFVGGGA--ILLKDAIKEAFPVPNERIVIVDDPQFANVRGFY 316 (318)
T ss_dssp -S-S-SEEEEESTTH--HHHHHHHHHHHT--GGGEE--SSGGGHHHHHHH
T ss_pred -hccCCeEEEECCcH--HHHHHHHHHhhCCCCCcEEECCCchhhHHHHHh
Confidence 34688999999996 568899999985 3467778899999998843
No 92
>PTZ00452 actin; Provisional
Probab=97.93 E-value=0.0001 Score=95.35 Aligned_cols=236 Identities=17% Similarity=0.192 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCHHHHHHHHHHH-HHcCCCeeeecchhHHHHHHhccccCCCCCceEE
Q psy7639 688 EISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVL 766 (2568)
Q Consensus 688 ev~a~iL~~L~~~ae~~~~~~~~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~l~li~Ep~AAAl~y~~~~~~~~~~~vl 766 (2568)
+....++.|+....- .....-..+++|-|..++..+|+.|.+.+ +.-+.+.+.+.+.|.+++++++. .+-+
T Consensus 80 d~~e~iw~~~f~~~l-~v~p~~~pvlitE~~~~~~~~Re~l~eilFE~~~vp~~~~~~~~~lslya~g~-------~tgl 151 (375)
T PTZ00452 80 DDIEIIWHHAFYNEL-CMSPEDQPVFMTDAPMNSKFNRERMTQIMFETFNTPCLYISNEAVLSLYTSGK-------TIGL 151 (375)
T ss_pred HHHHHHHHHHHHhhc-CCCcccCceeeecCCCCCHHHHHHHHHHHhhccCCceEEEechHHHHHHHCCC-------ceee
Confidence 344456665532210 12223456899999999999999887765 56788899999999999988753 3679
Q ss_pred EEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHhcC
Q psy7639 767 IFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLS 846 (2568)
Q Consensus 767 V~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~LS 846 (2568)
|+|+|.|.+.++-+- +|. -+.......++||.++++-|.+.|... +..+.... . +..++..|+.+.
T Consensus 152 VVDiG~~~t~v~PV~--dG~--~l~~~~~r~~~gG~~lt~~L~~lL~~~-----~~~~~~~~-~----~~~~~~iKe~~c 217 (375)
T PTZ00452 152 VVDSGEGVTHCVPVF--EGH--QIPQAITKINLAGRLCTDYLTQILQEL-----GYSLTEPH-Q----RIIVKNIKERLC 217 (375)
T ss_pred eecCCCCcceEEEEE--CCE--EeccceEEeeccchHHHHHHHHHHHhc-----CCCCCCHH-H----HHHHHHHHHHhc
Confidence 999999999887664 552 233333335799999999887776431 11111110 0 112334444433
Q ss_pred CCC----------------cceeeeccccCCcceEEecchHhH---HHHHHHHH-----HhHHHHHHHHHHHccCC--cc
Q psy7639 847 SST----------------EASIEIDALYDGIDFYTKISRARF---EELCSDLF-----RSTLQPVEKALQDAKLD--KS 900 (2568)
Q Consensus 847 ~~~----------------~~~i~i~~l~~~~d~~~~itr~ef---e~l~~~l~-----~~i~~~i~~~L~~a~~~--~~ 900 (2568)
.-. ...+. |.+|.. +.+..+.| |-|++|-+ ..+.+.+.+++..+..+ ..
T Consensus 218 ~v~~d~~~e~~~~~~~~~~~~~y~---LPDg~~--i~l~~er~~~~E~LF~P~~~g~~~~gi~~~i~~si~~c~~d~r~~ 292 (375)
T PTZ00452 218 YTALDPQDEKRIYKESNSQDSPYK---LPDGNI--LTIKSQKFRCSEILFQPKLIGLEVAGIHHLAYSSIKKCDLDLRQE 292 (375)
T ss_pred cccCcHHHHHHHhhccCCcCceEE---CCCCCE--EEeehHHhcCcccccChhhcCCCCCChhHHHHHHHHhCCHhHHHH
Confidence 211 01111 334433 44555555 23344432 23456666777665432 22
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHhCCc-------cccccCCchhHHHhhHHHHHHH
Q psy7639 901 AIHDVVLVGGSTRIPKVQSLLQNFFCGK-------SLNLSINPDEAVAYGAAVQAAI 950 (2568)
Q Consensus 901 ~I~~ViLvGGssriP~v~~~l~~~f~~~-------~v~~~~npdeaVA~GAAl~aa~ 950 (2568)
=...|+|+||+|.+|.+.++|+..+... .+..+.++..++=+|++++|..
T Consensus 293 L~~nIvL~GG~Sl~~Gf~~RL~~El~~~~p~~~~v~v~~~~~r~~~aW~GgSilasl 349 (375)
T PTZ00452 293 LCRNIVLSGGTTLFPGIANRLSNELTNLVPSQLKIQVAAPPDRRFSAWIGGSIQCTL 349 (375)
T ss_pred hhccEEEecccccccCHHHHHHHHHHHhCCCCceeEEecCCCcceeEEECchhhcCc
Confidence 2678999999999999999998776221 1223345556777888888853
No 93
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA []. They are involved in the control of plasmid partition and required for the accurate segregation of the plasmid. ; PDB: 3IKY_C 3IKU_I 2ZGZ_B 1MWM_A 1MWK_A 2ZHC_A 2ZGY_A 2QU4_A.
Probab=97.92 E-value=4.6e-05 Score=96.28 Aligned_cols=174 Identities=17% Similarity=0.294 Sum_probs=96.6
Q ss_pred CeeeecchhHHHHHHhccccCCCCCceEEEEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHHHH
Q psy7639 738 NVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFK 817 (2568)
Q Consensus 738 ~~l~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~ 817 (2568)
..+.+++||.||.+.+... ..+...++|+|+||+|+|++++.- + .-.+....+...+|-..+-+.+.+.+.. ..
T Consensus 141 ~~V~V~PQ~~~A~~~~~~~--~~~~~~~lVVDIGG~T~Dv~~v~~--~-~~~~~~~~~~~~~Gvs~~~~~I~~~l~~-~~ 214 (318)
T PF06406_consen 141 KDVEVFPQSVGAVFDALMD--LDEDESVLVVDIGGRTTDVAVVRG--G-LPDISKCSGTPEIGVSDLYDAIAQALRS-AG 214 (318)
T ss_dssp EEEEEEESSHHHHHHHHHT--S-TTSEEEEEEE-SS-EEEEEEEG--G-G--EEEEEEETTSSTHHHHHHHHHHTT---S
T ss_pred eeEEEEcccHHHHHHHHHh--hcccCcEEEEEcCCCeEEeeeecC--C-ccccchhccCCchhHHHHHHHHHHHHHH-hc
Confidence 4578899999999987654 444567999999999999999862 2 2223344555678888777777666554 11
Q ss_pred hhhccCCCCCHHHHHHHHHHHHHHHHhcCCCCcceeeeccccCCcceEEecchHhHHHHHHHHHHhHHHHHHHHHHHccC
Q psy7639 818 RKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKL 897 (2568)
Q Consensus 818 ~~~~~~~~~~~~~~~~L~~~~E~aK~~LS~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~l~~~i~~~i~~~L~~a~~ 897 (2568)
.. .+.....++. +. .. ....+. ..... .=..+++.+.++..++++.+.|.+.+.+
T Consensus 215 ----~~--~s~~~~~~ii------~~-~~--~~~~~~--~~i~~-----~~~~~~v~~~i~~~~~~l~~~i~~~~~~--- 269 (318)
T PF06406_consen 215 ----ID--TSELQIDDII------RN-RK--DKGYLR--QVIND-----EDVIDDVSEVIEEAVEELINRILRELGD--- 269 (318)
T ss_dssp ----BH--HHHHHHHHHH------HT-TT---HHHHH--HHSSS-----HHHHHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred ----CC--CcHHHHHHHH------Hh-hh--ccceec--ccccc-----hhhHHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 00 0000111111 00 00 000000 00000 0012344445555555555555554432
Q ss_pred CccCcCeEEEEcCCCCcHHHHHHHHHHhC--CccccccCCchhHHHhhHH
Q psy7639 898 DKSAIHDVVLVGGSTRIPKVQSLLQNFFC--GKSLNLSINPDEAVAYGAA 945 (2568)
Q Consensus 898 ~~~~I~~ViLvGGssriP~v~~~l~~~f~--~~~v~~~~npdeaVA~GAA 945 (2568)
..+++.|+||||++. .+.+.|++.|+ ...+...-||..|-|+|-+
T Consensus 270 -~~~~~~I~~vGGGA~--ll~~~Ik~~~~~~~~~i~i~~~pqfAnv~G~~ 316 (318)
T PF06406_consen 270 -FSDIDRIFFVGGGAI--LLKDAIKEAFPVPNERIVIVDDPQFANVRGFY 316 (318)
T ss_dssp -S-S-SEEEEESTTHH--HHHHHHHHHHT--GGGEE--SSGGGHHHHHHH
T ss_pred -hccCCeEEEECCcHH--HHHHHHHHhhCCCCCcEEECCCchhhHHHHHh
Confidence 346899999999985 47888888885 3566778899999999954
No 94
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function. It has been shown in Salmonella enterica that srfB is one of the genes activated by the global signal transduction/regulatory system SsrA/B []. This activation takes place within eukaryotic cells. The activated genes include pathogenicity island 2 (SPI-2) genes and at least 10 other genes (srfB is one of them) which are believed to be horizontally acquired, and to be involved in virulence/pathogenicity [].
Probab=97.86 E-value=0.0013 Score=89.91 Aligned_cols=263 Identities=17% Similarity=0.260 Sum_probs=157.6
Q ss_pred eecHHHHHHHHHHHHHHHHHHHhCC--------------CCCeEEEEecCCCCHHHHHHHHHHHHHc--------CCc--
Q psy7639 110 TFAPEEISSMVLTKMKETAEAYLGH--------------SVRDAVITVPAYFNDAQRQATKDAGAIA--------GLN-- 165 (2568)
Q Consensus 110 ~~speel~a~~L~~l~~~ae~~l~~--------------~~~~~VITVPa~f~~~qr~al~~Aa~~A--------Gl~-- 165 (2568)
.||-..++.++|..+..+|-.+++. ....+++|||+--...+|+.++++++.| |.+
T Consensus 416 ~ySRSSLMtfML~EiL~QAL~QINSpa~R~r~~~~~~PR~LR~IILT~P~AMPk~Er~ifr~r~~~Ai~LvWk~lGw~~~ 495 (1002)
T PF07520_consen 416 HYSRSSLMTFMLSEILAQALMQINSPAQRLRRGHSDAPRRLRRIILTLPPAMPKPEREIFRRRMEEAIGLVWKALGWHPW 495 (1002)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccCCCChhhhheeEECCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 5788899999999999988776653 2457999999999999999999888777 421
Q ss_pred -------------------EEEEecchhHHHHhhccc------------------c---c------cCCCceEEEEEeCC
Q psy7639 166 -------------------VMRIVNEPTAAALAYGLD------------------K---N------LKGERNVLIFDLGG 199 (2568)
Q Consensus 166 -------------------~~~li~Ep~AAAl~y~~~------------------~---~------~~~~~~vlV~D~Gg 199 (2568)
+..=-+|.||.-+-|..+ + . ..+.-.|.-+|+||
T Consensus 496 ~~~~~~~~~~~~~~~~~P~v~~~WDEATC~QlVyLYnE~~~~fgG~~~~FF~~~~rp~~~~~~~~~~~~slriASIDIGG 575 (1002)
T PF07520_consen 496 DDDFDTNKDREKSWVPLPEVQMEWDEATCGQLVYLYNEIQVKFGGRAEEFFALMARPDRQPAPGEDPGPSLRIASIDIGG 575 (1002)
T ss_pred CCCcccccccccccCCCCceeEEeecceeeeeeehhHHHHHHcCCCHHHHHHHhcCCCccccccCCCCCceEEEEEecCC
Confidence 111135666654444211 1 0 11123589999999
Q ss_pred cceEEEEeeec----CCcEEEEEe---ecccccccccchHHHHH-HHHHHHHHhh----------------hcccCCCCH
Q psy7639 200 GTFDVSILSID----EGALFEVRS---TAGDTHLGGEDFDNRLV-SHLAEEFKRK----------------YKKDMSVNP 255 (2568)
Q Consensus 200 gT~Dvsv~~~~----~~~~~~v~~---~~gd~~lGG~~~D~~l~-~~l~~~~~~~----------------~~~~~~~~~ 255 (2568)
||||+.|-.+. .|....+.- ..-+-.+.|+|+=..++ .++...+.+. +|.+-....
T Consensus 576 GTTDL~It~Y~ld~G~g~nv~I~P~q~FReGFkvAGDDiLldVI~~~VlPal~~aL~~aG~~~~~~ll~~LfG~dg~~~~ 655 (1002)
T PF07520_consen 576 GTTDLMITQYRLDDGQGSNVKITPEQLFREGFKVAGDDILLDVIQRIVLPALQQALKKAGVADPRALLSRLFGGDGQSDQ 655 (1002)
T ss_pred CcceeeEEEEEeccCCcceeEECcchhhhhhcccccHHHHHHHHHHHhHHHHHHHHHHhcccCHHHHHHHHhCCcchhHH
Confidence 99999997765 332222221 11125678888855544 3444333322 111100000
Q ss_pred -H-------------HHHHHHHHHHHHHH-------------hcC-CCCceEE------EEee------eccCcceEEee
Q psy7639 256 -R-------------ALRRLRTAAERAKR-------------TLS-SSTEASI------EIDA------LYDGIDFYTKI 295 (2568)
Q Consensus 256 -~-------------~~~~L~~~aE~aK~-------------~LS-~~~~~~i------~i~~------l~~~~d~~~~i 295 (2568)
+ ...+++.++|..=. .|. ..+...+ .+.. -++-.++.+.|
T Consensus 656 ~~~lRqQ~~lQv~~Pi~l~iL~~yE~~d~~~~~~~~~~~f~ell~~~~Pt~~vl~yi~~~~~~~~~~~~~Fdildv~l~i 735 (1002)
T PF07520_consen 656 DRVLRQQFTLQVFIPIGLAILKAYENYDPLDPSAEIDATFGELLEREPPTAAVLDYINEEVRRLPAGAPDFDILDVPLEI 735 (1002)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCccccccHHHhcCCcCCcHHHHHHHHHHHhhcCCCCCCcceecceEEE
Confidence 0 01123334444221 111 0000000 0000 01113556789
Q ss_pred cHHHHHHHHh---hhhhhhHHHHHHHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcc---------------
Q psy7639 296 SRARFEELCS---DLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSL--------------- 357 (2568)
Q Consensus 296 tR~efe~l~~---~l~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v--------------- 357 (2568)
+..++...+. -.+..++..+-+++...+ -|-++|+|--||+|.||..+.+..+ .++
T Consensus 736 ~~~~l~~~~~~~r~~i~~~L~~LcEvv~~Y~-----CDVLLLTGRPSrlPgvqalfr~~~p-vPp~RIv~l~~Y~tg~WY 809 (1002)
T PF07520_consen 736 DLEKLHAAFLSDRMVICKTLRALCEVVHHYD-----CDVLLLTGRPSRLPGVQALFRHLLP-VPPDRIVPLHGYRTGNWY 809 (1002)
T ss_pred cHHHHHHHHHhCcccHHHHHHHHHHHHHHhC-----CCEEEEcCCccccHHHHHHHHHhCC-CCcccEEecCCeeecccc
Confidence 9999988775 566666777777776654 6789999999999999999999883 221
Q ss_pred -----cccCCchhHHHhhHHHHHHHH
Q psy7639 358 -----NLSINPDEAVAYGAAVQAAIL 378 (2568)
Q Consensus 358 -----~~~~npdeaVA~GAa~~aa~l 378 (2568)
..--||...||.||.+-+...
T Consensus 810 PF~~~~rI~dPKTTaaVGAmLc~La~ 835 (1002)
T PF07520_consen 810 PFNDQGRIDDPKTTAAVGAMLCLLAE 835 (1002)
T ss_pred cCCCCCcCCCchHHHHHHHHHHHHhc
Confidence 122499999999997765443
No 95
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative. This domain may be involved in generating or regenerating the active sites of enzymes related to (R)-2-hydroxyglutaryl-CoA dehydratase and benzoyl-CoA reductase.
Probab=97.80 E-value=0.00021 Score=87.20 Aligned_cols=173 Identities=21% Similarity=0.258 Sum_probs=103.9
Q ss_pred EEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHhhh
Q psy7639 1537 RIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKY 1616 (2568)
Q Consensus 1537 ~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~~ 1616 (2568)
..++|-+|-+.....-.+. .+ .|+|+||..+-+..++ +|.+.+.. .....-.|+-.|.+.+++.|
T Consensus 73 ~~~~ei~~~~~g~~~~~~~--~~--~vidiGgqd~k~i~~~--~g~~~~~~-~n~~ca~Gtg~f~e~~a~~l-------- 137 (248)
T TIGR00241 73 KIVTEISCHGKGANYLAPE--AR--GVIDIGGQDSKVIKID--DGKVDDFT-MNDKCAAGTGRFLEVTARRL-------- 137 (248)
T ss_pred CceEEhhHHHHHHHHHCCC--CC--EEEEecCCeeEEEEEC--CCcEeeee-ecCcccccccHHHHHHHHHc--------
Confidence 3678888866544332221 12 6999999988888887 67443333 33434578888888888773
Q ss_pred cCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccc-cCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCC
Q psy7639 1617 KKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDAL-YDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDK 1695 (2568)
Q Consensus 1617 ~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~-~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~a~~~~ 1695 (2568)
+.+ ...+..+ +.+.+....-.....+-.+.. ... +..-.+ .++++..+++.+...+.+.+...+
T Consensus 138 ~~~----~~e~~~~---~~~~~~~~~~~~~c~vf~~s~vi~~--l~~g~~---~~di~~~~~~~va~~i~~~~~~~~--- 202 (248)
T TIGR00241 138 GVS----VEELGSL---AEKADRKAKISSMCTVFAESELISL--LAAGVK---KEDILAGVYESIAERVAEMLQRLK--- 202 (248)
T ss_pred CCC----HHHHHHH---HhcCCCCCCcCCEeEEEechhHHHH--HHCCCC---HHHHHHHHHHHHHHHHHHHHhhcC---
Confidence 222 2222221 111111110111111111100 000 000122 356777777777777777665543
Q ss_pred cccc-EEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHH
Q psy7639 1696 SAIH-DVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAV 1742 (2568)
Q Consensus 1696 ~~Id-~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai 1742 (2568)
++ .|+|.||.+++|.+.+.+.+.+ +..+..+.+|..+.|+|||+
T Consensus 203 --~~~~Vvl~GGva~n~~l~~~l~~~l-g~~v~~~~~~~~~~AlGaAl 247 (248)
T TIGR00241 203 --IEAPIVFTGGVSKNKGLVKALEKKL-GMKVITPPEPQIVGAVGAAL 247 (248)
T ss_pred --CCCCEEEECccccCHHHHHHHHHHh-CCcEEcCCCccHHHHHHHHh
Confidence 34 6999999999999999999999 67788888998999999996
No 96
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative. This domain may be involved in generating or regenerating the active sites of enzymes related to (R)-2-hydroxyglutaryl-CoA dehydratase and benzoyl-CoA reductase.
Probab=97.68 E-value=0.00059 Score=83.34 Aligned_cols=170 Identities=18% Similarity=0.226 Sum_probs=99.9
Q ss_pred eecchhHHHHHHhccccCCCCCceEEEEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHHHHhhh
Q psy7639 741 RIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKY 820 (2568)
Q Consensus 741 ~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~ 820 (2568)
..++|-+|-+....+.. +. .=.|+|+||..+-+..++ +|..... ........|+-.|.+.+.+.|--.
T Consensus 73 ~~~~ei~~~~~g~~~~~--~~--~~~vidiGgqd~k~i~~~--~g~~~~~-~~n~~ca~Gtg~f~e~~a~~l~~~----- 140 (248)
T TIGR00241 73 KIVTEISCHGKGANYLA--PE--ARGVIDIGGQDSKVIKID--DGKVDDF-TMNDKCAAGTGRFLEVTARRLGVS----- 140 (248)
T ss_pred CceEEhhHHHHHHHHHC--CC--CCEEEEecCCeeEEEEEC--CCcEeee-eecCcccccccHHHHHHHHHcCCC-----
Confidence 46778877655432221 11 125999999988877776 5632221 223334457777777665544311
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHhcCC----CCcceeeecc-ccCCcceEEecchHhHHHHHHHHHHhHHHHHHHHHHHc
Q psy7639 821 KKDMSVNPRALRRLRTAAERAKRTLSS----STEASIEIDA-LYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDA 895 (2568)
Q Consensus 821 ~~~~~~~~~~~~~L~~~~E~aK~~LS~----~~~~~i~i~~-l~~~~d~~~~itr~efe~l~~~l~~~i~~~i~~~L~~a 895 (2568)
.. +++..+..-.. +..+.+..+. +... +.-.. ..++++..+++.+...+.+.+...
T Consensus 141 -------~~-------e~~~~~~~~~~~~~~~~~c~vf~~s~vi~~--l~~g~---~~~di~~~~~~~va~~i~~~~~~~ 201 (248)
T TIGR00241 141 -------VE-------ELGSLAEKADRKAKISSMCTVFAESELISL--LAAGV---KKEDILAGVYESIAERVAEMLQRL 201 (248)
T ss_pred -------HH-------HHHHHHhcCCCCCCcCCEeEEEechhHHHH--HHCCC---CHHHHHHHHHHHHHHHHHHHHhhc
Confidence 11 22222222111 1111111110 0000 00011 235677777777777777766544
Q ss_pred cCCccCcC-eEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHH
Q psy7639 896 KLDKSAIH-DVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQ 947 (2568)
Q Consensus 896 ~~~~~~I~-~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~ 947 (2568)
+ ++ .|+|.||.++.|++.+.+.+.+ +.++..+.+|..+.|+|||+.
T Consensus 202 ~-----~~~~Vvl~GGva~n~~l~~~l~~~l-g~~v~~~~~~~~~~AlGaAl~ 248 (248)
T TIGR00241 202 K-----IEAPIVFTGGVSKNKGLVKALEKKL-GMKVITPPEPQIVGAVGAALL 248 (248)
T ss_pred C-----CCCCEEEECccccCHHHHHHHHHHh-CCcEEcCCCccHHHHHHHHhC
Confidence 3 44 7999999999999999999999 677888889999999999973
No 97
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ]. This inactivation is mechanism-based and involves cleavage of the Co-C bond of the cobalamin cofactor, coenzyme B12 (AdoCbl), forming 5 -deoxyadenosine and a modified coenzyme []. Irreversible inactivation of the enzyme results from tight binding to the modified, inactive cobalamin [, ]. The glycerol-inactivated enzyme undergoes rapid reactivation in the presence of free AdoCbl, ATP, and Mg 2+ (or Mn 2+ ) []. Reactivation is mediated by a complex of two proteins: a large subunit (DdrA/PduG) and a small subunit (DdrB/PduH, IPR009192 from INTERPRO) [, ]. The two subunits of the reactivating factor for glycerol dehydratase have been shown to form a tight complex that serves to reactivate the glycerol-inactivated holoenzyme, as well as O2-inactivated holoenzyme in vitro []. It is believed that this reactivating factor replaces an enzyme-bound, adenine-lacking inactive cobalamin with a free, adenine-containing active cobalamin []. PduG and PduH, part of the propanediol utilization pdu operon, are believed to have a similar function in the reactivation of propanediol dehydratase. PduG was also proposed, on the basis of genetic tests, to be a cobalamin adenosyltransferase involved in the conversion of inactive cobalamin (B12) to AdoCbl []. However, this function has since been shown to belong to another protein, PduO (IPR009221 from INTERPRO, IPR012228 from INTERPRO) []. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO for more details on the propanediol utilization pathway and pdu operon, as well as on the glycerol breakdown pathway.; PDB: 1NBW_C 2D0P_C 2D0O_C.
Probab=97.56 E-value=0.0022 Score=75.09 Aligned_cols=192 Identities=22% Similarity=0.261 Sum_probs=105.7
Q ss_pred HHHHHcCCceEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHH
Q psy7639 1526 DAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLV 1605 (2568)
Q Consensus 1526 ~Aa~~AGL~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~ 1605 (2568)
+.-+..|..+..-=-|+++|.+...... ..+..+.|+|+|||++|.|++.- +|.+ .-..-.| .|+-++..|.
T Consensus 103 ~l~~~lgv~V~igGvEAemAi~GALTTP--Gt~~PlaIlDmG~GSTDAsii~~-~g~v-~~iHlAG----AG~mVTmlI~ 174 (332)
T PF08841_consen 103 ELEEELGVPVEIGGVEAEMAILGALTTP--GTDKPLAILDMGGGSTDASIINR-DGEV-TAIHLAG----AGNMVTMLIN 174 (332)
T ss_dssp HHHHHHTSEEEEECEHHHHHHHHHTTST--T--SSEEEEEE-SSEEEEEEE-T-TS-E-EEEEEE-----SHHHHHHHHH
T ss_pred HHHHHHCCceEEccccHHHHHhcccCCC--CCCCCeEEEecCCCcccHHHhCC-CCcE-EEEEecC----CchhhHHHHH
Confidence 3345578888888899999988654322 34566899999999999999984 5522 2222222 4777776665
Q ss_pred HHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCe---------eEEE-Ecc------------ccCC--ccee
Q psy7639 1606 SHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTE---------ASIE-IDA------------LYDG--IDFY 1661 (2568)
Q Consensus 1606 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~---------~~i~-i~~------------~~~~--~~~~ 1661 (2568)
..| +.+ +. .-+|..|+.--.+-+ ..+. .+. ..++ ..+.
T Consensus 175 sEL--------Gl~----d~------~lAE~IKkyPlaKVEslfhiR~EDGtv~Ffd~pl~p~~faRvvi~~~~~lvPi~ 236 (332)
T PF08841_consen 175 SEL--------GLE----DR------ELAEDIKKYPLAKVESLFHIRHEDGTVQFFDEPLDPDVFARVVILKEDGLVPIP 236 (332)
T ss_dssp HHC--------T-S-----H------HHHHHHHHS-EEEEECTTEEEETTS-EEE-SS---CCCTTSEEEECTTEEEEES
T ss_pred Hhh--------CCC----CH------HHHHHhhhcchhhhccceEEEecCCceEEecCCCChHHeeEEEEecCCceeecC
Confidence 442 221 22 245666643211000 0000 000 0011 1122
Q ss_pred eecCHHHHHHHHhHHHHHHH-HHHHHHHHHc--CCCCccccEEEEecCccCChhHHHHHHhhhcCC-------cccccCC
Q psy7639 1662 TKISRARFEELCSDLFRSTL-QPVEKALQDA--KLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGK-------SLNLSIN 1731 (2568)
Q Consensus 1662 ~~itr~~fe~l~~pli~~i~-~~i~~~L~~a--~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~-------~v~~~~n 1731 (2568)
..++-++...+=+..-++.. ...-++|++- .-+..+|+.|+|||||+.=--|-++|.+.+..- .++-.--
T Consensus 237 ~~~~lEkir~vRr~AK~kVFVtNa~RaL~~vsPtgniR~i~fVVlVGGSALDFEIp~~vtdaLs~y~iVaGRgNIrG~eG 316 (332)
T PF08841_consen 237 GDLSLEKIRSVRREAKEKVFVTNALRALKQVSPTGNIRDIPFVVLVGGSALDFEIPQMVTDALSHYGIVAGRGNIRGVEG 316 (332)
T ss_dssp STS-HHHHHHHHHHHHHHHHHHHHHHHHCCCSTTSSCCC--EEEEESGGGGSSSHHHHHHHHHCTTT-EEEE--GGGTST
T ss_pred CCccHHHHHHHHHHhhhhhhHHHHHHHHHhcCCCCCcccCceEEEecCchhhhhhHHHHHHHHhhCcceeeccccccccC
Confidence 23455555444444433332 3344566544 234468999999999999888888898887432 3444567
Q ss_pred chhhhhccHHHH
Q psy7639 1732 PDEAVAYGAAVQ 1743 (2568)
Q Consensus 1732 P~eAVA~GAai~ 1743 (2568)
|.-|||.|.++-
T Consensus 317 PRNAVATGLvls 328 (332)
T PF08841_consen 317 PRNAVATGLVLS 328 (332)
T ss_dssp TSTHHHHHHHHH
T ss_pred chHHHHHHHHHh
Confidence 999999998754
No 98
>KOG0679|consensus
Probab=97.53 E-value=0.002 Score=78.39 Aligned_cols=114 Identities=17% Similarity=0.258 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHHHhCCCC--CeEEEEecCCCCHHHHHHHHHHH-HHcCCcEEEEecchhHHHHhhccccccCCCce
Q psy7639 115 EISSMVLTKMKETAEAYLGHSV--RDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERN 191 (2568)
Q Consensus 115 el~a~~L~~l~~~ae~~l~~~~--~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~ 191 (2568)
++..++++|..+. .+...+ --++||-|++=+.+.|+.+.+.+ +...+....|..+|+++|++-|.. +
T Consensus 86 D~~~~~w~~~~~~---~Lk~~p~ehP~litEp~wN~~~~Rek~~ElmFE~~nvPAf~L~k~~v~~AFA~Grs-------t 155 (426)
T KOG0679|consen 86 DLFEMQWRYAYKN---QLKVNPEEHPVLITEPPWNTRANREKLTELMFEKLNVPAFYLAKTAVCTAFANGRS-------T 155 (426)
T ss_pred HHHHHHHHHHHhh---hhhcCccccceeeecCCCCcHHHHHHHHHHHHhhcCCceEEEechHHHHHHhcCCC-------c
Confidence 5677778877743 333333 35899999998899998887765 555677788999999999877543 5
Q ss_pred EEEEEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHHHHHHHHHH
Q psy7639 192 VLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 242 (2568)
Q Consensus 192 vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~ 242 (2568)
-||+|+|++++.++=+ .+|-++ -.++.. ..+||+.++..+.+.|..+
T Consensus 156 alVvDiGa~~~svsPV--~DG~Vl-qk~vvk-s~laGdFl~~~~~q~l~~~ 202 (426)
T KOG0679|consen 156 ALVVDIGATHTSVSPV--HDGYVL-QKGVVK-SPLAGDFLNDQCRQLLEPK 202 (426)
T ss_pred eEEEEecCCCceeeee--ecceEe-eeeeEe-cccchHHHHHHHHHHHhhc
Confidence 7999999999988865 345221 112222 6799999999999888765
No 99
>KOG0679|consensus
Probab=97.52 E-value=0.0022 Score=77.95 Aligned_cols=115 Identities=17% Similarity=0.218 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHHHHhCC--CCCeEEEEEcCCCCHHHHHHHHHH-HHHcCCCeeeecchhHHHHHHhccccCCCCCc
Q psy7639 687 EEISSMVLTKMKETAEAYLGH--SVRDAVITVPAYFNDAQRQATKDA-GAIAGLNVMRIVNEPTAAALAYGLDKNLKGER 763 (2568)
Q Consensus 687 eev~a~iL~~L~~~ae~~~~~--~~~~~VITVPa~f~~~qr~al~~A-a~~AGl~~l~li~Ep~AAAl~y~~~~~~~~~~ 763 (2568)
=++..++.+|..+. ++.. .-.-++||-|++=+.+.|+.+.+. .+...+....|..+|+++|++-|. .
T Consensus 85 WD~~~~~w~~~~~~---~Lk~~p~ehP~litEp~wN~~~~Rek~~ElmFE~~nvPAf~L~k~~v~~AFA~Gr-------s 154 (426)
T KOG0679|consen 85 WDLFEMQWRYAYKN---QLKVNPEEHPVLITEPPWNTRANREKLTELMFEKLNVPAFYLAKTAVCTAFANGR-------S 154 (426)
T ss_pred HHHHHHHHHHHHhh---hhhcCccccceeeecCCCCcHHHHHHHHHHHHhhcCCceEEEechHHHHHHhcCC-------C
Confidence 46677777777642 2333 234589999998888888877665 467788889999999999998753 3
Q ss_pred eEEEEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHH
Q psy7639 764 NVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEE 815 (2568)
Q Consensus 764 ~vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~ 815 (2568)
+-||+|+|++++.++-+. +|- +--.+.. -..+||+-++..+.+.|..+
T Consensus 155 talVvDiGa~~~svsPV~--DG~-Vlqk~vv-ks~laGdFl~~~~~q~l~~~ 202 (426)
T KOG0679|consen 155 TALVVDIGATHTSVSPVH--DGY-VLQKGVV-KSPLAGDFLNDQCRQLLEPK 202 (426)
T ss_pred ceEEEEecCCCceeeeee--cce-EeeeeeE-ecccchHHHHHHHHHHHhhc
Confidence 689999999999887654 562 1112222 36799999999998888765
No 100
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=97.27 E-value=0.0025 Score=76.62 Aligned_cols=174 Identities=20% Similarity=0.239 Sum_probs=118.6
Q ss_pred HHHHHHHHcCCceEEEEechhHHHHHhhcc-c---cccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChh
Q psy7639 1523 ATKDAGAIAGLNVMRIVNEPTAAALAYGLD-K---NLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGE 1598 (2568)
Q Consensus 1523 ~~~~Aa~~AGL~v~~li~EPtAAal~y~~~-~---~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~ 1598 (2568)
...+|+++|||+...+=-|.-|.--+|..- . ......+++|+|+|+-.+-+.++. +| +.+.+.. ..+||+
T Consensus 153 ~ri~a~~~AGl~~~vlDV~~fAl~ra~~~~~~~~~~~~a~~~vav~~Igat~s~l~vi~--~g---k~ly~r~-~~~g~~ 226 (354)
T COG4972 153 SRIDAFELAGLEPKVLDVESFALLRAYRLLASQFGPEEAAMKVAVFDIGATSSELLVIQ--DG---KILYTRE-VPVGTD 226 (354)
T ss_pred HHHHHHHHcCCCceEEehHHHHHHHHHHHHHHHhCCchhhhhheeeeecccceEEEEEE--CC---eeeeEee-ccCcHH
Confidence 346789999999988878888876666621 1 111223478999999999999988 77 4555554 448999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccCCcceeeecCHHHHHHHHhHHHH
Q psy7639 1599 DFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFR 1678 (2568)
Q Consensus 1599 d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~l~~pli~ 1678 (2568)
+++..+.+.+ +.+. ..+|.+|+... +.-+.-.++..|+++
T Consensus 227 Qlt~~i~r~~--------~L~~-----------~~a~~~k~~~~---------------------~P~~y~~~vl~~f~~ 266 (354)
T COG4972 227 QLTQEIQRAY--------SLTE-----------EKAEEIKRGGT---------------------LPTDYGSEVLRPFLG 266 (354)
T ss_pred HHHHHHHHHh--------CCCh-----------hHhHHHHhCCC---------------------CCCchhHHHHHHHHH
Confidence 9999887652 2222 25566666542 122334566777777
Q ss_pred HHHHHHHHHHHHc--CCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHH
Q psy7639 1679 STLQPVEKALQDA--KLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQA 1744 (2568)
Q Consensus 1679 ~i~~~i~~~L~~a--~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a 1744 (2568)
.+.+-|.+.|+-. .-...+||+++|.||...+-.+.+.|.+.++- +....||-..-+.++...+
T Consensus 267 ~l~~ei~Rslqfy~~~s~~~~id~i~LaGggA~l~gL~~~i~qrl~~--~t~vanPf~~~~~~~~v~k 332 (354)
T COG4972 267 ELTQEIRRSLQFYLSQSEMVDIDQILLAGGGASLEGLAAAIQQRLSI--PTEVANPFAYMALNVKVNK 332 (354)
T ss_pred HHHHHHHHHHHHHHhccccceeeEEEEecCCcchhhHHHHHHHHhCC--CeEeeCHHHHHhhhhcccc
Confidence 7777777777633 22456799999999999999999999999832 3334577665555555444
No 101
>COG5277 Actin and related proteins [Cytoskeleton]
Probab=97.13 E-value=0.0055 Score=79.91 Aligned_cols=98 Identities=16% Similarity=0.237 Sum_probs=73.6
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHH-HHHcCCCeeeecchhHHHHHHhccccCCCCCceEEEEEeCCceeEEEEEEEcCCcE
Q psy7639 709 VRDAVITVPAYFNDAQRQATKDA-GAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGAL 787 (2568)
Q Consensus 709 ~~~~VITVPa~f~~~qr~al~~A-a~~AGl~~l~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~~~~ 787 (2568)
-..+++|-|..+...+|..+.+. .+...+..+.+..++.+++++.+... .+.+|+|+|.+.++|+=+- +|
T Consensus 106 ~~pllltep~~n~~~~re~~~e~~fE~~~vp~~~~~~~~~l~~ya~g~~~-----~~g~ViD~G~~~t~v~PV~--DG-- 176 (444)
T COG5277 106 EHPLLLTEPPLNPPSNREKITELLFETLNVPALYLAIQAVLSLYASGSSD-----ETGLVIDSGDSVTHVIPVV--DG-- 176 (444)
T ss_pred CCceEEeccCCCcHHHHHHHHHHHHHhcCCcceEeeHHHHHHHHhcCCCC-----CceEEEEcCCCceeeEeee--cc--
Confidence 34689999999999999877654 46667777888888888877765432 4789999999999887553 45
Q ss_pred EEEEeeccCCCCccchHHHHHHHHHHHH
Q psy7639 788 FEVRSTAGDTHLGGEDFDNRLVSHLAEE 815 (2568)
Q Consensus 788 ~~v~~~~gd~~lGG~~~D~~l~~~l~~~ 815 (2568)
+.+.....-..+||++++.-|.+.|...
T Consensus 177 ~~l~~a~~ri~~gG~~it~~l~~lL~~~ 204 (444)
T COG5277 177 IVLPKAVKRIDIGGRDITDYLKKLLREK 204 (444)
T ss_pred ccccccceeeecCcHHHHHHHHHHHhhc
Confidence 2333334446799999999888877763
No 102
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=97.10 E-value=0.0092 Score=72.03 Aligned_cols=172 Identities=19% Similarity=0.258 Sum_probs=110.9
Q ss_pred HHHHHHHHHcCCCeeeecchhHHHHHHhccc-cCC---CCCceEEEEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCcc
Q psy7639 726 QATKDAGAIAGLNVMRIVNEPTAAALAYGLD-KNL---KGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGG 801 (2568)
Q Consensus 726 ~al~~Aa~~AGl~~l~li~Ep~AAAl~y~~~-~~~---~~~~~vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG 801 (2568)
....+|.+.|||....+=-|.-|.--+|... ... .....++|+|+|+..+.++++. +|. .+. ..+..+||
T Consensus 152 ~~ri~a~~~AGl~~~vlDV~~fAl~ra~~~~~~~~~~~~a~~~vav~~Igat~s~l~vi~--~gk---~ly-~r~~~~g~ 225 (354)
T COG4972 152 ESRIDAFELAGLEPKVLDVESFALLRAYRLLASQFGPEEAAMKVAVFDIGATSSELLVIQ--DGK---ILY-TREVPVGT 225 (354)
T ss_pred HHHHHHHHHcCCCceEEehHHHHHHHHHHHHHHHhCCchhhhhheeeeecccceEEEEEE--CCe---eee-EeeccCcH
Confidence 3446889999999888877888776666421 111 1123378999999999999987 342 222 23467899
Q ss_pred chHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHhcCCCCcceeeeccccCCcceEEecchHhHHHHHHHHH
Q psy7639 802 EDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLF 881 (2568)
Q Consensus 802 ~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~LS~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~l~ 881 (2568)
+++.+.+...+.-.+ ..++.+|......+ +--.+...|++
T Consensus 226 ~Qlt~~i~r~~~L~~-------------------~~a~~~k~~~~~P~---------------------~y~~~vl~~f~ 265 (354)
T COG4972 226 DQLTQEIQRAYSLTE-------------------EKAEEIKRGGTLPT---------------------DYGSEVLRPFL 265 (354)
T ss_pred HHHHHHHHHHhCCCh-------------------hHhHHHHhCCCCCC---------------------chhHHHHHHHH
Confidence 998887655432111 14556665543322 11235567777
Q ss_pred HhHHHHHHHHHHH--ccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHH
Q psy7639 882 RSTLQPVEKALQD--AKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAA 945 (2568)
Q Consensus 882 ~~i~~~i~~~L~~--a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAA 945 (2568)
+.+.+.|.+.|+- +.-...+|++++|.||++++-.+.+.+.+.++ .+ ....||-...+.++.
T Consensus 266 ~~l~~ei~Rslqfy~~~s~~~~id~i~LaGggA~l~gL~~~i~qrl~-~~-t~vanPf~~~~~~~~ 329 (354)
T COG4972 266 GELTQEIRRSLQFYLSQSEMVDIDQILLAGGGASLEGLAAAIQQRLS-IP-TEVANPFAYMALNVK 329 (354)
T ss_pred HHHHHHHHHHHHHHHhccccceeeEEEEecCCcchhhHHHHHHHHhC-CC-eEeeCHHHHHhhhhc
Confidence 7777777777762 22245579999999999999999999999983 22 223466544444433
No 103
>COG5277 Actin and related proteins [Cytoskeleton]
Probab=96.96 E-value=0.008 Score=78.41 Aligned_cols=97 Identities=16% Similarity=0.249 Sum_probs=71.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHH-HHcCCcEEEEecchhHHHHhhccccccCCCceEEEEEeCCcceEEEEeeecCCcEE
Q psy7639 137 RDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALF 215 (2568)
Q Consensus 137 ~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~ 215 (2568)
..+++|-|..+....|..+.+.+ +...+..+.+..++.+++.+.+... .+.+|+|+|.+.++++=+- +| +
T Consensus 107 ~pllltep~~n~~~~re~~~e~~fE~~~vp~~~~~~~~~l~~ya~g~~~-----~~g~ViD~G~~~t~v~PV~--DG--~ 177 (444)
T COG5277 107 HPLLLTEPPLNPPSNREKITELLFETLNVPALYLAIQAVLSLYASGSSD-----ETGLVIDSGDSVTHVIPVV--DG--I 177 (444)
T ss_pred CceEEeccCCCcHHHHHHHHHHHHHhcCCcceEeeHHHHHHHHhcCCCC-----CceEEEEcCCCceeeEeee--cc--c
Confidence 46899999999999998887654 5556777777888777776665432 5789999999999988552 34 1
Q ss_pred EEEeecccccccccchHHHHHHHHHHH
Q psy7639 216 EVRSTAGDTHLGGEDFDNRLVSHLAEE 242 (2568)
Q Consensus 216 ~v~~~~gd~~lGG~~~D~~l~~~l~~~ 242 (2568)
.+.....-..+||++++.-|.+.|.+.
T Consensus 178 ~l~~a~~ri~~gG~~it~~l~~lL~~~ 204 (444)
T COG5277 178 VLPKAVKRIDIGGRDITDYLKKLLREK 204 (444)
T ss_pred cccccceeeecCcHHHHHHHHHHHhhc
Confidence 233333336799999999888887763
No 104
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ]. This inactivation is mechanism-based and involves cleavage of the Co-C bond of the cobalamin cofactor, coenzyme B12 (AdoCbl), forming 5 -deoxyadenosine and a modified coenzyme []. Irreversible inactivation of the enzyme results from tight binding to the modified, inactive cobalamin [, ]. The glycerol-inactivated enzyme undergoes rapid reactivation in the presence of free AdoCbl, ATP, and Mg 2+ (or Mn 2+ ) []. Reactivation is mediated by a complex of two proteins: a large subunit (DdrA/PduG) and a small subunit (DdrB/PduH, IPR009192 from INTERPRO) [, ]. The two subunits of the reactivating factor for glycerol dehydratase have been shown to form a tight complex that serves to reactivate the glycerol-inactivated holoenzyme, as well as O2-inactivated holoenzyme in vitro []. It is believed that this reactivating factor replaces an enzyme-bound, adenine-lacking inactive cobalamin with a free, adenine-containing active cobalamin []. PduG and PduH, part of the propanediol utilization pdu operon, are believed to have a similar function in the reactivation of propanediol dehydratase. PduG was also proposed, on the basis of genetic tests, to be a cobalamin adenosyltransferase involved in the conversion of inactive cobalamin (B12) to AdoCbl []. However, this function has since been shown to belong to another protein, PduO (IPR009221 from INTERPRO, IPR012228 from INTERPRO) []. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO for more details on the propanediol utilization pathway and pdu operon, as well as on the glycerol breakdown pathway.; PDB: 1NBW_C 2D0P_C 2D0O_C.
Probab=96.92 E-value=0.015 Score=68.31 Aligned_cols=190 Identities=23% Similarity=0.245 Sum_probs=97.5
Q ss_pred HHcCCCeeeecchhHHHHHHhccccCCCCCceEEEEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHH
Q psy7639 733 AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHL 812 (2568)
Q Consensus 733 ~~AGl~~l~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l 812 (2568)
+..|.++..-=-|+.+|++...... ..+..+.++|+||||+|.|++.-. | .+.....+| .|+.+...|...
T Consensus 106 ~~lgv~V~igGvEAemAi~GALTTP--Gt~~PlaIlDmG~GSTDAsii~~~-g-~v~~iHlAG----AG~mVTmlI~sE- 176 (332)
T PF08841_consen 106 EELGVPVEIGGVEAEMAILGALTTP--GTDKPLAILDMGGGSTDASIINRD-G-EVTAIHLAG----AGNMVTMLINSE- 176 (332)
T ss_dssp HHHTSEEEEECEHHHHHHHHHTTST--T--SSEEEEEE-SSEEEEEEE-TT-S--EEEEEEE-----SHHHHHHHHHHH-
T ss_pred HHHCCceEEccccHHHHHhcccCCC--CCCCCeEEEecCCCcccHHHhCCC-C-cEEEEEecC----CchhhHHHHHHh-
Confidence 4457777777789999988765432 234568999999999999999743 4 233333333 255454433221
Q ss_pred HHHHHhhhccCCCCCHHHHHHHHHHHHHHHHhcCCCCcc--eee--------ecc------------ccCC--cceEEec
Q psy7639 813 AEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEA--SIE--------IDA------------LYDG--IDFYTKI 868 (2568)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~LS~~~~~--~i~--------i~~------------l~~~--~d~~~~i 868 (2568)
.+. ++ +.-||..|+---..-+. .+. ++. +.++ ..+...+
T Consensus 177 -------LGl----~d------~~lAE~IKkyPlaKVEslfhiR~EDGtv~Ffd~pl~p~~faRvvi~~~~~lvPi~~~~ 239 (332)
T PF08841_consen 177 -------LGL----ED------RELAEDIKKYPLAKVESLFHIRHEDGTVQFFDEPLDPDVFARVVILKEDGLVPIPGDL 239 (332)
T ss_dssp -------CT-----S-------HHHHHHHHHS-EEEEECTTEEEETTS-EEE-SS---CCCTTSEEEECTTEEEEESSTS
T ss_pred -------hCC----CC------HHHHHHhhhcchhhhccceEEEecCCceEEecCCCChHHeeEEEEecCCceeecCCCc
Confidence 111 11 12456666541110000 000 000 0011 0111122
Q ss_pred chHhHHHHHHHHHHhH-HHHHHHHHHHccC--CccCcCeEEEEcCCCCcHHHHHHHHHHhCCc-------cccccCCchh
Q psy7639 869 SRARFEELCSDLFRST-LQPVEKALQDAKL--DKSAIHDVVLVGGSTRIPKVQSLLQNFFCGK-------SLNLSINPDE 938 (2568)
Q Consensus 869 tr~efe~l~~~l~~~i-~~~i~~~L~~a~~--~~~~I~~ViLvGGssriP~v~~~l~~~f~~~-------~v~~~~npde 938 (2568)
+-+++..+=...=+++ ..-..++|++... +..+|+.|+|||||+.=--|-+++.+.+..- .+.-..-|..
T Consensus 240 ~lEkir~vRr~AK~kVFVtNa~RaL~~vsPtgniR~i~fVVlVGGSALDFEIp~~vtdaLs~y~iVaGRgNIrG~eGPRN 319 (332)
T PF08841_consen 240 SLEKIRSVRREAKEKVFVTNALRALKQVSPTGNIRDIPFVVLVGGSALDFEIPQMVTDALSHYGIVAGRGNIRGVEGPRN 319 (332)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHCCCSTTSSCCC--EEEEESGGGGSSSHHHHHHHHHCTTT-EEEE--GGGTSTTST
T ss_pred cHHHHHHHHHHhhhhhhHHHHHHHHHhcCCCCCcccCceEEEecCchhhhhhHHHHHHHHhhCcceeeccccccccCchH
Confidence 3333332222222221 1223455554432 3356999999999999888888998888433 4455668999
Q ss_pred HHHhhHHHHH
Q psy7639 939 AVAYGAAVQA 948 (2568)
Q Consensus 939 aVA~GAAl~a 948 (2568)
|||.|.++.-
T Consensus 320 AVATGLvlsy 329 (332)
T PF08841_consen 320 AVATGLVLSY 329 (332)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999988743
No 105
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit. Members of this family are the Q subunit of one of two related types of four-subunit ATP-dependent benzoyl-CoA reductase. This enzyme system catalyzes the dearomatization of benzoyl-CoA, a common intermediate in pathways for the degradation for a number of different aromatic compounds, such as phenol and toluene.
Probab=96.74 E-value=0.06 Score=65.97 Aligned_cols=219 Identities=15% Similarity=0.161 Sum_probs=114.4
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCceEEEEechhHHHHHhhcccccc
Q psy7639 1477 RKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLK 1556 (2568)
Q Consensus 1477 ~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~v~~li~EPtAAal~y~~~~~~~ 1556 (2568)
.....|.+....+|+.+.+.+ |....++-..|=..|. |..+.. + ...++|-+|.|.....-.+
T Consensus 61 ~tg~~~~~~a~~~l~~~l~~~----g~~~~~v~~~~~TGyG---r~~~~~----a----~~~v~EItaha~Ga~~~~p-- 123 (293)
T TIGR03192 61 RTGNNSPDSAKNALQGIMDKI----GMKLEDINYVVGTGYG---RVNVPF----A----HKAITEIACHARGANYMGG-- 123 (293)
T ss_pred cCCCCHHHHHHHHHHHHHHHc----CCcccceEEEEEECcc---hhhcch----h----hcceeeHHHHHHHHHHhcC--
Confidence 445567777777777776655 3222222211113443 333221 1 2468999998775433221
Q ss_pred CcceEEEEEeCCcceEEEEEEe-cCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHH
Q psy7639 1557 GERNVLIFDLGGGTFDVSILSI-DEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAE 1635 (2568)
Q Consensus 1557 ~~~~vlV~D~GGGT~Dvsi~~~-~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E 1635 (2568)
+..=-|+|+||--.- ++.+ ++|.+.+...... +-.|.-.|=+.+++.| +.+ ...+..+ +.
T Consensus 124 -p~v~tIIDIGGQDsK--~I~~d~~G~v~dF~MNdk-CAAGTGrFLE~~A~~L--------gi~----leel~~~---a~ 184 (293)
T TIGR03192 124 -NAVRTILDMGGQDCK--AIHCDEKGKVTNFLMNDK-CAAGTGRGMEVISDLM--------QIP----IADLGPR---SF 184 (293)
T ss_pred -CCCCEEEEeCCCceE--EEEEcCCCcEeeeeecCc-ccccccHHHHHHHHHc--------CCC----HHHHHHH---HH
Confidence 112389999996544 4444 3675544443333 3345333333354442 222 2333322 22
Q ss_pred Hhh-c--ccCCCCeeEEE---EccccCCcceeeecCHHHH-HHHHhHHHHHHHHHHHHHHHHcCCCCccccEEEEecCcc
Q psy7639 1636 RAK-R--TLSSSTEASIE---IDALYDGIDFYTKISRARF-EELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGST 1708 (2568)
Q Consensus 1636 ~aK-~--~Ls~~~~~~i~---i~~~~~~~~~~~~itr~~f-e~l~~pli~~i~~~i~~~L~~a~~~~~~Id~ViLVGGss 1708 (2568)
+++ . .+|+....-.. +.....| .+++++ --+|..+.+++. ..+++.++. +.|+|.||.+
T Consensus 185 ~~~~~p~~Iss~CtVFAeSevi~l~~~G------~~~edI~aGl~~sia~rv~----~~~~~~~i~----~~v~~~GGva 250 (293)
T TIGR03192 185 DVETEPEAVSSICVVFAKSEALGLLKAG------YTKNMVIAAYCQAMAERVV----SLLERIGVE----EGFFITGGIA 250 (293)
T ss_pred hcCCCCCCcCCcceEeccHhHHHHHHCC------CCHHHHHHHHHHHHHHHHH----HHhcccCCC----CCEEEECccc
Confidence 222 1 23332221111 0011122 344433 244444545443 333333322 2499999999
Q ss_pred CChhHHHHHHhhhcCCccc-ccCCchhhhhccHHHHHHH
Q psy7639 1709 RIPKVQSLLQNFFCGKSLN-LSINPDEAVAYGAAVQAAI 1746 (2568)
Q Consensus 1709 r~P~V~~~I~~~f~~~~v~-~~~nP~eAVA~GAai~a~~ 1746 (2568)
+.|.+++.+++.++ ..+. .+.+|..+-|+|||++|.-
T Consensus 251 ~N~~l~~al~~~Lg-~~v~~~p~~p~~~GAlGAAL~A~~ 288 (293)
T TIGR03192 251 KNPGVVKRIERILG-IKAVDTKIDSQIAGALGAALFGYT 288 (293)
T ss_pred ccHHHHHHHHHHhC-CCceeCCCCccHHHHHHHHHHHHH
Confidence 99999999999994 4454 5678999999999999853
No 106
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=96.73 E-value=0.0027 Score=81.03 Aligned_cols=161 Identities=17% Similarity=0.232 Sum_probs=98.1
Q ss_pred cceEEEEecCCCCHHHHHHHHHHHHH------------cCCceEEEEechhHHHHHhhccccccCcceEEEEEeCCcceE
Q psy7639 1505 VRDAVITVPAYFNDAQRQATKDAGAI------------AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFD 1572 (2568)
Q Consensus 1505 ~~~~ViTVPa~f~~~qR~~~~~Aa~~------------AGL~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~D 1572 (2568)
..-.+||.++..- +-+++|.+. ||+++..++. |-|++.+...+ +.+..++++|+||||++
T Consensus 88 ~~ahIITg~~~~~----~Nl~~~v~~~~~~~gdfVVA~AG~~le~iva-~~ASg~avLse---Eke~gVa~IDIGgGTT~ 159 (475)
T PRK10719 88 SGAVIITGETARK----ENAREVVMALSGSAGDFVVATAGPDLESIIA-GKGAGAQTLSE---ERNTRVLNIDIGGGTAN 159 (475)
T ss_pred ccEEEEEechhHH----HHHHHHHHHhcccccceeeeccCccHHHhhh-HHHhhHHHhhh---hccCceEEEEeCCCceE
Confidence 4457888887654 445555555 7777777766 99988876532 45677999999999999
Q ss_pred EEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEc
Q psy7639 1573 VSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEID 1652 (2568)
Q Consensus 1573 vsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~ 1652 (2568)
++++. +| ++..+..- ..||+.++.. -+. .-...+|. .+++.+.+ -..+
T Consensus 160 iaVf~--~G---~l~~T~~l-~vGG~~IT~D-~~~----------~i~yis~~-~~~l~~~~---~~~~----------- 207 (475)
T PRK10719 160 YALFD--AG---KVIDTACL-NVGGRLIETD-SQG----------RVTYISPP-GQMILDEL---GLAI----------- 207 (475)
T ss_pred EEEEE--CC---EEEEEEEE-ecccceEEEC-CCC----------CEEEEChH-HHHHHHHc---CCCc-----------
Confidence 99999 78 55555554 4788876643 110 00011222 22222221 1111
Q ss_pred cccCCcceeeecCHHHHHHHHhHHHHHHHHHHH-------HHHHHc-CCC-CccccEEEEecCccCCh
Q psy7639 1653 ALYDGIDFYTKISRARFEELCSDLFRSTLQPVE-------KALQDA-KLD-KSAIHDVVLVGGSTRIP 1711 (2568)
Q Consensus 1653 ~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~-------~~L~~a-~~~-~~~Id~ViLVGGssr~P 1711 (2568)
..|. .++.+++..+|+-..+-+.+.+. +.|-.. .++ ...++.|.+.||-+.+-
T Consensus 208 --~~G~----~~~~~~L~~i~~~Ma~~l~~~i~~~~~~~~~~l~~~~~l~~~~~~~~i~fSGGVad~i 269 (475)
T PRK10719 208 --TDGR----SLTGEQLQQVTRRMAELLVEVIGGALSPLAQALMTTKLLPAGVPPEIITFSGGVGDCI 269 (475)
T ss_pred --cccc----cCCHHHHHHHHHHHHHHHHHHhCCCCChhHHhhccCCCCCCCCCCCEEEEecchHhhe
Confidence 0111 47778888888776666666554 122111 222 36789999999977664
No 107
>KOG0797|consensus
Probab=96.56 E-value=0.017 Score=72.58 Aligned_cols=154 Identities=18% Similarity=0.254 Sum_probs=110.8
Q ss_pred ccccccccccccCChhhhhcccccccEEeeCCCCCceeEEecCCccccCHHHHHHHHHHHHHHHHHHHhCCccc-----e
Q psy7639 1433 VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVR-----D 1507 (2568)
Q Consensus 1433 v~~~k~~ig~~~~d~~~~~~~k~~~~~~~~~~~~~~~~v~~~~~~~~~~p~ev~a~iL~~lk~~ae~~l~~~~~-----~ 1507 (2568)
+...||.+|-...+.. ||+++.+--++.+.|. +..++.+++++.+-+-+.-..++.|..+.. .
T Consensus 162 v~c~kr~~~ee~n~i~--------~y~l~~Pir~G~fNv~----~~y~Slq~l~~dlt~il~yaL~e~L~Ip~~kl~qy~ 229 (618)
T KOG0797|consen 162 VKCRKRIFGEEANKIS--------PYCLYHPIRRGHFNVS----PPYYSLQRLCEDLTAILDYALLEKLHIPHKKLFQYH 229 (618)
T ss_pred HHHHHHHhhhhhhcCC--------cceeecccccceeccC----CcchhHHHHHHHHHHHHHHHHHHhcCCChhHhccee
Confidence 4455666665554432 6666665444434332 456788999988877777666777776644 5
Q ss_pred EEEEecCCCCHHH-HHHHHHHHHHcCCceEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEE
Q psy7639 1508 AVITVPAYFNDAQ-RQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEV 1586 (2568)
Q Consensus 1508 ~ViTVPa~f~~~q-R~~~~~Aa~~AGL~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev 1586 (2568)
+|+-||-.|.... +++++-.....||....++-|..||.+..|.. .-.|+|+|.-++.|+.++ +|.. +
T Consensus 230 aVlVVpD~f~r~hveefl~ilL~eL~F~~~~v~QESlaatfGaGls-------s~CVVdiGAQkTsIaCVE--dGvs--~ 298 (618)
T KOG0797|consen 230 AVLVVPDTFDRRHVEEFLTILLGELGFNSAVVHQESLAATFGAGLS-------SACVVDIGAQKTSIACVE--DGVS--L 298 (618)
T ss_pred EEEEecchhhHHHHHHHHHHHHHHhccceEEEEhhhhHHHhcCCcc-------ceeEEEccCcceeEEEee--cCcc--c
Confidence 9999999998766 67777788889999999999999998876653 248999999999999998 7732 2
Q ss_pred EEecCCCCCChhHHHHHHHHHHH
Q psy7639 1587 RSTAGDTHLGGEDFDNRLVSHLA 1609 (2568)
Q Consensus 1587 ~~~~gd~~lGG~d~D~~l~~~l~ 1609 (2568)
..+.-.-..||+|+++.++-.+.
T Consensus 299 ~ntri~L~YGGdDitr~f~~ll~ 321 (618)
T KOG0797|consen 299 PNTRIILPYGGDDITRCFLWLLR 321 (618)
T ss_pred cCceEEeccCCchHHHHHHHHHH
Confidence 23333334699999999976654
No 108
>KOG0797|consensus
Probab=96.53 E-value=0.021 Score=71.71 Aligned_cols=155 Identities=17% Similarity=0.253 Sum_probs=105.6
Q ss_pred eehhhhhhCCCCCChhHhhccccCCeEEEeCCCCCeEEEEEcCceeEeCHHHHHHHHHHHHHHHHHHHhCCCCC-----e
Q psy7639 637 VFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVR-----D 711 (2568)
Q Consensus 637 i~~~KrllG~~~~d~~v~~~~~~~~~~v~~~~~~~~~~v~~~~~~~~~speev~a~iL~~L~~~ae~~~~~~~~-----~ 711 (2568)
+-+-||.+|..+.+ .-||.+...-.+..+.|. ...+|..++++.+-+-+.-...+.+..+++ .
T Consensus 162 v~c~kr~~~ee~n~--------i~~y~l~~Pir~G~fNv~----~~y~Slq~l~~dlt~il~yaL~e~L~Ip~~kl~qy~ 229 (618)
T KOG0797|consen 162 VKCRKRIFGEEANK--------ISPYCLYHPIRRGHFNVS----PPYYSLQRLCEDLTAILDYALLEKLHIPHKKLFQYH 229 (618)
T ss_pred HHHHHHHhhhhhhc--------CCcceeecccccceeccC----CcchhHHHHHHHHHHHHHHHHHHhcCCChhHhccee
Confidence 34556666654433 225555443334444442 345788888877666555555666665544 6
Q ss_pred EEEEEcCCCCHHHHHHHHH-HHHHcCCCeeeecchhHHHHHHhccccCCCCCceEEEEEeCCceeEEEEEEEcCCcEEEE
Q psy7639 712 AVITVPAYFNDAQRQATKD-AGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEV 790 (2568)
Q Consensus 712 ~VITVPa~f~~~qr~al~~-Aa~~AGl~~l~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~~~~~~v 790 (2568)
+|+-||-.|.....+.+.. -....||+...++.|..||.+..|+. .-+|+|+|+-+|.++.++ +|. .+
T Consensus 230 aVlVVpD~f~r~hveefl~ilL~eL~F~~~~v~QESlaatfGaGls-------s~CVVdiGAQkTsIaCVE--dGv--s~ 298 (618)
T KOG0797|consen 230 AVLVVPDTFDRRHVEEFLTILLGELGFNSAVVHQESLAATFGAGLS-------SACVVDIGAQKTSIACVE--DGV--SL 298 (618)
T ss_pred EEEEecchhhHHHHHHHHHHHHHHhccceEEEEhhhhHHHhcCCcc-------ceeEEEccCcceeEEEee--cCc--cc
Confidence 8999999999888665554 45778999999999999998877654 468999999999887775 552 23
Q ss_pred EeeccCCCCccchHHHHHHHHHHH
Q psy7639 791 RSTAGDTHLGGEDFDNRLVSHLAE 814 (2568)
Q Consensus 791 ~~~~gd~~lGG~~~D~~l~~~l~~ 814 (2568)
..+.--...||.|+++.++-.+..
T Consensus 299 ~ntri~L~YGGdDitr~f~~ll~r 322 (618)
T KOG0797|consen 299 PNTRIILPYGGDDITRCFLWLLRR 322 (618)
T ss_pred cCceEEeccCCchHHHHHHHHHHh
Confidence 333333567999999998876654
No 109
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D. This model describes the D subunit of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows sequence similarity to the A subunit (TIGR02259) and to the 2-hydroxyglutaryl-CoA dehydratase alpha chain.
Probab=96.53 E-value=0.099 Score=63.25 Aligned_cols=212 Identities=16% Similarity=0.094 Sum_probs=109.6
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHhCC---ccceEEEEecCCCCHHHHHHHHHHHHHcCCceEEEEechhHHHHHhhccccc
Q psy7639 1479 TFAPEEISSMVLTKMKETAEAYLGH---SVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNL 1555 (2568)
Q Consensus 1479 ~~~p~ev~a~iL~~lk~~ae~~l~~---~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~v~~li~EPtAAal~y~~~~~~ 1555 (2568)
...|.+....+|+.+.+.+ |. .+..++. ..|. |.. ..+ + ..+.|-+|.|....+-.+
T Consensus 37 ~~~~~~~~~~~l~~~~~~~----g~~~~~i~~i~~---TGYG---R~~-~~a----~----~~vtEIt~ha~GA~~~~p- 96 (262)
T TIGR02261 37 QRDPFKLAEDAYDDLLEEA----GLAAADVAYCAT---TGEG---ESL-AFH----T----GHFYSMTTHARGAIYLNP- 96 (262)
T ss_pred CCCHHHHHHHHHHHHHHHc----CCChhheEEEEE---ECCc---hhh-hhh----c----CCeeEEeHHHHHHHHHCC-
Confidence 4667777766776666544 32 2222222 4553 332 111 1 135788887765443222
Q ss_pred cCcceEEEEEeCCcceEEEEEEe-cCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHH
Q psy7639 1556 KGERNVLIFDLGGGTFDVSILSI-DEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAA 1634 (2568)
Q Consensus 1556 ~~~~~vlV~D~GGGT~Dvsi~~~-~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~ 1634 (2568)
..=-|+|+||--+- ++.+ ++|.+.....-.. .-.|.-.|=+.+++.| +.+ ...+..+ +
T Consensus 97 ---~~~tIiDIGGQD~K--~I~~~~~G~v~~f~MNdk-CAAGTG~FLe~~A~~L--------~i~----leel~~~---a 155 (262)
T TIGR02261 97 ---EARAVLDIGALHGR--AIRMDERGKVEAYKMTSQ-CASGSGQFLENIARYL--------GIA----QDEIGSL---S 155 (262)
T ss_pred ---CCCEEEEeCCCceE--EEEEcCCCcEeeEEecCc-ccccccHHHHHHHHHh--------CCC----HHHHHHH---H
Confidence 12289999997655 4555 3665544443333 2345334433444432 222 2333322 3
Q ss_pred HHhhcc--cCCCCeeEEE---EccccCCcceeeecCHHHHH-HHHhHHHHHHHHHHHHHHHHcCCCCccccEEEEecCcc
Q psy7639 1635 ERAKRT--LSSSTEASIE---IDALYDGIDFYTKISRARFE-ELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGST 1708 (2568)
Q Consensus 1635 E~aK~~--Ls~~~~~~i~---i~~~~~~~~~~~~itr~~fe-~l~~pli~~i~~~i~~~L~~a~~~~~~Id~ViLVGGss 1708 (2568)
.+++.. +|+....-.. +.....| .+|+++- -++..+.+++. ..++..+... +.|+|.||.+
T Consensus 156 ~~~~~~~~iss~CtVFaeSevi~~~~~G------~~~edI~aGl~~sia~r~~----~~~~~~~~~~---~~v~~~GGva 222 (262)
T TIGR02261 156 QQADNPEKVSGICAVLAETDVINMVSRG------ISAPNILKGIHESMADRLA----KLLKSLGALD---GTVLCTGGLA 222 (262)
T ss_pred hcCCCCCCcCCCceEEchhhHHHHHHCC------CCHHHHHHHHHHHHHHHHH----HHHhccCCCC---CcEEEECccc
Confidence 333322 3332221111 0011112 3444332 34444444443 3444332211 2499999999
Q ss_pred CChhHHHHHHhhhcCCc----ccccCCchhhhhccHHHHH
Q psy7639 1709 RIPKVQSLLQNFFCGKS----LNLSINPDEAVAYGAAVQA 1744 (2568)
Q Consensus 1709 r~P~V~~~I~~~f~~~~----v~~~~nP~eAVA~GAai~a 1744 (2568)
+.+.+++.+++.+++.. +..+.+|+.+-|+|||++|
T Consensus 223 ~n~~~~~~le~~l~~~~~~~~v~~~~~~q~~gAlGAAl~~ 262 (262)
T TIGR02261 223 LDAGLLEALKDAIQEAKMAVAAENHPDAIYAGAIGAALWG 262 (262)
T ss_pred ccHHHHHHHHHHhccCCcceEecCCCcchHHHHHHHHHcC
Confidence 99999999999995433 4456688899999999864
No 110
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.
Probab=96.40 E-value=0.066 Score=68.00 Aligned_cols=176 Identities=22% Similarity=0.215 Sum_probs=94.9
Q ss_pred EEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHhhh
Q psy7639 1537 RIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKY 1616 (2568)
Q Consensus 1537 ~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~~ 1616 (2568)
.+++|-+|.+.....-.+ ..+..-.|+|+|| -|.-++.+.+|.+.... -.+-.-.|+-.|=+.+++.|
T Consensus 220 ~iv~EItaha~GA~~L~p-~~~~v~TIIDIGG--QDsK~I~l~~G~v~dF~-MNdkCAAGTGrFLE~~A~~L-------- 287 (404)
T TIGR03286 220 LIQEELTVNSKGAVYLAD-KQEGPATVIDIGG--MDNKAISVWDGIPDNFT-MGGICAGASGRFLEMTAKRL-------- 287 (404)
T ss_pred ceEEEEhhHHHHHHHhcc-cCCCCcEEEEeCC--CceEEEEEcCCceeeEE-EcCcccccCcHHHHHHHHHh--------
Confidence 358898886543222111 1112359999999 56666777677543333 23333345444544555543
Q ss_pred cCCCCCCHHHHHHHHHHHHHhh---cccCCCCeeEEE---EccccCCcceeeecCHHHHHHHHhHHHHHHHHHHH-HHHH
Q psy7639 1617 KKDMSVNPRALRRLRTAAERAK---RTLSSSTEASIE---IDALYDGIDFYTKISRARFEELCSDLFRSTLQPVE-KALQ 1689 (2568)
Q Consensus 1617 ~~~~~~~~~~~~~L~~~~E~aK---~~Ls~~~~~~i~---i~~~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~-~~L~ 1689 (2568)
+.+ ...+ -+.+.+++ ..+++....--. +.....| .+++ +++.-+...+..-+. .+++
T Consensus 288 gi~----ieEl---~~lA~~~~~~pv~IsS~CtVFaeSevIsll~~G------~~~e---DIaAGl~~SIa~rv~~~l~~ 351 (404)
T TIGR03286 288 GVD----ITEL---GKLALKGMPEKVRMNSYCIVFGIQDLVTALAEG------ASPE---DVAAAACHSVAEQVYEQQLQ 351 (404)
T ss_pred CCC----HHHH---HHHHHhCCCCCCCccCcccccccHhHHHHHHCC------CCHH---HHHHHHHHHHHHHHHHHHhh
Confidence 222 2222 22333332 223322221000 0000011 3333 333333333333333 2333
Q ss_pred HcCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHH
Q psy7639 1690 DAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAA 1745 (2568)
Q Consensus 1690 ~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~ 1745 (2568)
..++ -+.|+++||.++.+.+.+.+++.+ +..+.++.+|..+-|+|||++|.
T Consensus 352 ~~~i----~~~VvftGGva~N~gvv~ale~~L-g~~iivPe~pq~~GAiGAAL~A~ 402 (404)
T TIGR03286 352 EIDV----REPVILVGGTSLIEGLVKALGDLL-GIEVVVPEYSQYIGAVGAALLAS 402 (404)
T ss_pred cCCC----CCcEEEECChhhhHHHHHHHHHHh-CCcEEECCcccHHHHHHHHHHhc
Confidence 3322 234999999999999999999999 56788899999999999999973
No 111
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]
Probab=96.23 E-value=0.15 Score=63.31 Aligned_cols=176 Identities=19% Similarity=0.277 Sum_probs=99.3
Q ss_pred ceEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHH
Q psy7639 1534 NVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFK 1613 (2568)
Q Consensus 1534 ~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~ 1613 (2568)
..-..++|-+|-+..-..-.+ .-+ .|+|+||- |.=++.+.+|.+....- .+-+-.|.-.|=+.+++.
T Consensus 208 ~aD~~~~Ei~ah~kgA~~f~p--~~d--tIiDIGGQ--D~K~i~i~dG~v~df~m-N~~CAAGtGrFLE~~A~~------ 274 (396)
T COG1924 208 GADKVVVEISAHAKGARYFAP--DVD--TVIDIGGQ--DSKVIKLEDGKVDDFTM-NDKCAAGTGRFLEVIARR------ 274 (396)
T ss_pred cCCcceeeeehhHHHHHHhCC--CCc--EEEEecCc--ceeEEEEeCCeeeeeEe-ccccccccchHHHHHHHH------
Confidence 344467777775443221111 111 89999996 55566666885433332 222334433333334333
Q ss_pred hhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEcc-----ccCCcceeeecCHHHHHHHHhHHHHHHHHHHHH-H
Q psy7639 1614 RKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDA-----LYDGIDFYTKISRARFEELCSDLFRSTLQPVEK-A 1687 (2568)
Q Consensus 1614 ~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~-----~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~-~ 1687 (2568)
++.++ ..+-+.+++++..-.-+..+.+-... ...| ...|+++.-+...+..-+-. +
T Consensus 275 --Lgv~v-------~E~~~~A~~~~~~v~i~S~CaVF~eSevi~~~~~G---------~~~EdI~AGl~~Sv~~~v~~~~ 336 (396)
T COG1924 275 --LGVDV-------EELGKLALKATPPVKINSRCAVFAESEVISALAEG---------ASPEDILAGLAYSVAENVAEKV 336 (396)
T ss_pred --hCCCH-------HHHHHHHhcCCCCcccCCeeEEEehHHHHHHHHcC---------CCHHHHHHHHHHHHHHHHHHHH
Confidence 33332 23334455555422211122211110 0011 12455666665555544443 5
Q ss_pred HHHcCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHHHHH
Q psy7639 1688 LQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAA 1745 (2568)
Q Consensus 1688 L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~ 1745 (2568)
++.-.+.+ . |+|+||.+....+.+.+.+.+ +.++.++.+|..+=|+|||+++.
T Consensus 337 ~~~~~i~~--~--iv~~GGva~n~av~~ale~~l-g~~V~vP~~~ql~GAiGAAL~a~ 389 (396)
T COG1924 337 IKRVDIEE--P--IVLQGGVALNKAVVRALEDLL-GRKVIVPPYAQLMGAIGAALIAK 389 (396)
T ss_pred hhccCCCC--C--EEEECcchhhHHHHHHHHHHh-CCeeecCCccchhhHHHHHHHHh
Confidence 55443322 1 999999999999999999999 68899999999999999999984
No 112
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A. This model describes A, or gamma, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows strong sequence similarity to the 2-hydroxyglutaryl-CoA dehydratase alpha chain and to subunits of different types of benzoyl-CoA reductase (such as the bzd type).
Probab=95.98 E-value=0.12 Score=64.84 Aligned_cols=173 Identities=16% Similarity=0.182 Sum_probs=95.1
Q ss_pred EEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEEec-CCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHhh
Q psy7639 1537 RIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSID-EGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRK 1615 (2568)
Q Consensus 1537 ~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~-~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~ 1615 (2568)
.+++|-+|-|....+-.+ ..=.|+|+||--+- ++.++ +|.+........ +-.|.-.|=+.+++.|
T Consensus 249 ~vitEItcHA~GA~~l~P----~vrTIIDIGGQDsK--~I~ld~~G~V~dF~MNDK-CAAGTGrFLE~mA~~L------- 314 (432)
T TIGR02259 249 HIRSEILCHGLGAHLMYP----GTRTVLDIGGQDTK--GIQIDDHGIVENFQMNDR-CAAGCGRYLGYIADEM------- 314 (432)
T ss_pred ceeeeHHHHHHHHHHHCC----CCCEEEEeCCCceE--EEEEcCCCcEeeeeecCc-ccccchHHHHHHHHHc-------
Confidence 467999998775433322 22389999997665 45554 464443333333 3345444444444442
Q ss_pred hcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEcc-----ccCCcceeeecCHHHHHHHHhHHHHHHHHHHHHHHHH
Q psy7639 1616 YKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDA-----LYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQD 1690 (2568)
Q Consensus 1616 ~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~-----~~~~~~~~~~itr~~fe~l~~pli~~i~~~i~~~L~~ 1690 (2568)
+.+ ...+.. .+.+++....-...+.+--+. ...| .++++ ++.-+...+..-+...+.+
T Consensus 315 -gi~----leEl~~---lA~~a~~pv~ISS~CtVFAESEVIslla~G------~~reD---IaAGL~~SIA~Rv~s~l~r 377 (432)
T TIGR02259 315 -NMG----LHELGP---LAMKSSKPARINSTCTVFAGAELRDRLALG------DKRED---ILAGLHRAIILRAISIISR 377 (432)
T ss_pred -CCC----HHHHHH---HHhcCCCCCCcCCcceEEehHHHHHHHHCC------CCHHH---HHHHHHHHHHHHHHHHHhc
Confidence 232 223332 233333322222222221111 1112 34433 3333333333333333333
Q ss_pred c-CCCCccccEEEEecCccCChhHHHHHHhhhc----CCcccccCCchhhhhccHHHHH
Q psy7639 1691 A-KLDKSAIHDVVLVGGSTRIPKVQSLLQNFFC----GKSLNLSINPDEAVAYGAAVQA 1744 (2568)
Q Consensus 1691 a-~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~----~~~v~~~~nP~eAVA~GAai~a 1744 (2568)
. ++ -+.|+|.||.++.+.+.+.+++.++ +..+..+.+|..+-|+|||++|
T Consensus 378 ~~~i----~~~VvftGGvA~N~gvv~aLe~~L~~~~~~~~V~Vp~~pq~~GALGAAL~a 432 (432)
T TIGR02259 378 SGGI----TDQFTFTGGVAKNEAAVKELRKLIKENYGEVQINIDPDSIYTGALGASEFA 432 (432)
T ss_pred ccCC----CCCEEEECCccccHHHHHHHHHHHccccCCCeEecCCCccHHHHHHHHHhC
Confidence 3 21 2359999999999999999999995 4567788899999999999875
No 113
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]
Probab=95.88 E-value=0.14 Score=63.48 Aligned_cols=74 Identities=22% Similarity=0.292 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHhHHHHHHH-HHHHccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHH
Q psy7639 872 RFEELCSDLFRSTLQPVEK-ALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAI 950 (2568)
Q Consensus 872 efe~l~~~l~~~i~~~i~~-~L~~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ 950 (2568)
..|+++.-+...+..-+-. +++...+... |+|+||.+....+.+.+++.+ +.++..+.+|...-|+|||++|..
T Consensus 316 ~~EdI~AGl~~Sv~~~v~~~~~~~~~i~~~----iv~~GGva~n~av~~ale~~l-g~~V~vP~~~ql~GAiGAAL~a~~ 390 (396)
T COG1924 316 SPEDILAGLAYSVAENVAEKVIKRVDIEEP----IVLQGGVALNKAVVRALEDLL-GRKVIVPPYAQLMGAIGAALIAKE 390 (396)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhccCCCCC----EEEECcchhhHHHHHHHHHHh-CCeeecCCccchhhHHHHHHHHhh
Confidence 3567777777666655544 5655443322 999999999999999999999 588999999999999999999864
No 114
>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown]
Probab=95.44 E-value=1.2 Score=57.98 Aligned_cols=53 Identities=25% Similarity=0.292 Sum_probs=39.3
Q ss_pred cCcCeEEEEcCCCCcHHHHHHHHHHhCCc-------------------cccccCCchhHHHhhHHHHHHHHc
Q psy7639 900 SAIHDVVLVGGSTRIPKVQSLLQNFFCGK-------------------SLNLSINPDEAVAYGAAVQAAILS 952 (2568)
Q Consensus 900 ~~I~~ViLvGGssriP~v~~~l~~~f~~~-------------------~v~~~~npdeaVA~GAAl~aa~ls 952 (2568)
.+.|-++|+|--||.|.||..+....+-. +...--||...+|.||.+.+..+.
T Consensus 777 y~cDVlLlTGRPsrlPgvqalfr~~~pvp~~rilpl~~Yrvg~WYPF~k~grIddPKtTAaVGAMLC~Lsl~ 848 (1014)
T COG4457 777 YDCDVLLLTGRPSRLPGVQALFRHLQPVPVNRILPLDDYRVGTWYPFRKQGRIDDPKTTAAVGAMLCALSLE 848 (1014)
T ss_pred hcccEEEEcCCcccCccHHHHHhhcCCCCCCceEeccceeccceecccccCcCCCcchHHHHHHHHHHHHhh
Confidence 34678999999999999999998765311 112234899999999988776543
No 115
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.
Probab=95.37 E-value=0.14 Score=65.25 Aligned_cols=71 Identities=25% Similarity=0.341 Sum_probs=52.3
Q ss_pred HHHHhhhhhhhHHHHHH-HHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHH
Q psy7639 301 EELCSDLFRSTLQPVEK-ALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAA 376 (2568)
Q Consensus 301 e~l~~~l~~~i~~~i~~-~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa 376 (2568)
++++..+...+...+.. +++..++ -+.|+++||.++.+.+.+.+++.+ +.++..+.+|..+.|.|||++|.
T Consensus 331 eDIaAGl~~SIa~rv~~~l~~~~~i----~~~VvftGGva~N~gvv~ale~~L-g~~iivPe~pq~~GAiGAAL~A~ 402 (404)
T TIGR03286 331 EDVAAAACHSVAEQVYEQQLQEIDV----REPVILVGGTSLIEGLVKALGDLL-GIEVVVPEYSQYIGAVGAALLAS 402 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCC----CCcEEEECChhhhHHHHHHHHHHh-CCcEEECCcccHHHHHHHHHHhc
Confidence 33444444444444432 3443332 235999999999999999999999 67888899999999999999884
No 116
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D. This model describes the D subunit of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows sequence similarity to the A subunit (TIGR02259) and to the 2-hydroxyglutaryl-CoA dehydratase alpha chain.
Probab=95.24 E-value=0.4 Score=58.14 Aligned_cols=72 Identities=17% Similarity=0.071 Sum_probs=50.0
Q ss_pred HHHHHHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCCcc----ccccCCchhHHHhhHHHHH
Q psy7639 874 EELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKS----LNLSINPDEAVAYGAAVQA 948 (2568)
Q Consensus 874 e~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~----v~~~~npdeaVA~GAAl~a 948 (2568)
++++.-+...+...+-..++..+.. -+.|+|.||.++.+.+.+.|++.+++.. +..+.+|+.+-|+|||++|
T Consensus 187 edI~aGl~~sia~r~~~~~~~~~~~---~~~v~~~GGva~n~~~~~~le~~l~~~~~~~~v~~~~~~q~~gAlGAAl~~ 262 (262)
T TIGR02261 187 PNILKGIHESMADRLAKLLKSLGAL---DGTVLCTGGLALDAGLLEALKDAIQEAKMAVAAENHPDAIYAGAIGAALWG 262 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCC---CCcEEEECcccccHHHHHHHHHHhccCCcceEecCCCcchHHHHHHHHHcC
Confidence 3444445555554444445443211 1359999999999999999999985433 4556688899999999974
No 117
>PRK13317 pantothenate kinase; Provisional
Probab=95.23 E-value=0.33 Score=60.07 Aligned_cols=49 Identities=22% Similarity=0.268 Sum_probs=42.7
Q ss_pred CcCeEEEEc-CCCCcHHHHHHHHHHhC--CccccccCCchhHHHhhHHHHHH
Q psy7639 901 AIHDVVLVG-GSTRIPKVQSLLQNFFC--GKSLNLSINPDEAVAYGAAVQAA 949 (2568)
Q Consensus 901 ~I~~ViLvG-GssriP~v~~~l~~~f~--~~~v~~~~npdeaVA~GAAl~aa 949 (2568)
.++.|+++| |.++.|.+++.+.+.+. +.++..+.+|..+.|+|||++|.
T Consensus 222 ~~~~Ivf~G~gla~n~~l~~~l~~~l~~~~~~~~~p~~~~~~gAlGAaL~a~ 273 (277)
T PRK13317 222 NIENIVYIGSTLTNNPLLQEIIESYTKLRNCTPIFLENGGYSGAIGALLLAT 273 (277)
T ss_pred CCCeEEEECcccccCHHHHHHHHHHHhcCCceEEecCCCchhHHHHHHHHhh
Confidence 357899999 79999999999998874 56777788999999999999875
No 118
>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown]
Probab=95.21 E-value=1.5 Score=57.24 Aligned_cols=82 Identities=20% Similarity=0.248 Sum_probs=54.9
Q ss_pred eEEeecHHHHHHHHhhh---hhhhHHHHHHHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcc----------
Q psy7639 291 FYTKISRARFEELCSDL---FRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSL---------- 357 (2568)
Q Consensus 291 ~~~~itR~efe~l~~~l---~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v---------- 357 (2568)
+-+.|.-.++++.+-.. +......+-+++.- .+-|-++|+|--+|.|.||..+....+ .++
T Consensus 743 ~pl~i~~~ql~e~~ls~~~~i~~~f~al~EaIn~-----y~cDVlLlTGRPsrlPgvqalfr~~~p-vp~~rilpl~~Yr 816 (1014)
T COG4457 743 VPLAIDLSQLHECFLSGDYDITGVFDALCEAINH-----YDCDVLLLTGRPSRLPGVQALFRHLQP-VPVNRILPLDDYR 816 (1014)
T ss_pred cceeccHHHHHHHHhhCcccccchHHHHHHHHhh-----hcccEEEEcCCcccCccHHHHHhhcCC-CCCCceEecccee
Confidence 34566667776655543 44445555555543 346789999999999999999887662 111
Q ss_pred ----------cccCCchhHHHhhHHHHHHHH
Q psy7639 358 ----------NLSINPDEAVAYGAAVQAAIL 378 (2568)
Q Consensus 358 ----------~~~~npdeaVA~GAa~~aa~l 378 (2568)
..--||...+|.||-+-+..+
T Consensus 817 vg~WYPF~k~grIddPKtTAaVGAMLC~Lsl 847 (1014)
T COG4457 817 VGTWYPFRKQGRIDDPKTTAAVGAMLCALSL 847 (1014)
T ss_pred ccceecccccCcCCCcchHHHHHHHHHHHHh
Confidence 112489999999997766544
No 119
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A. This model describes A, or gamma, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows strong sequence similarity to the 2-hydroxyglutaryl-CoA dehydratase alpha chain and to subunits of different types of benzoyl-CoA reductase (such as the bzd type).
Probab=95.11 E-value=0.18 Score=63.37 Aligned_cols=71 Identities=14% Similarity=0.187 Sum_probs=52.6
Q ss_pred HHHhhhhhhhHHHHHHHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhC----CCcccccCCchhHHHhhHHHHH
Q psy7639 302 ELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFC----GKSLNLSINPDEAVAYGAAVQA 375 (2568)
Q Consensus 302 ~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~----~~~v~~~~npdeaVA~GAa~~a 375 (2568)
+++..+...+...+...+...+ .--..|+|+||.++.+.+.+.|++.++ +.++..+.+|..+-|+|||++|
T Consensus 358 DIaAGL~~SIA~Rv~s~l~r~~---~i~~~VvftGGvA~N~gvv~aLe~~L~~~~~~~~V~Vp~~pq~~GALGAAL~a 432 (432)
T TIGR02259 358 DILAGLHRAIILRAISIISRSG---GITDQFTFTGGVAKNEAAVKELRKLIKENYGEVQINIDPDSIYTGALGASEFA 432 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhccc---CCCCCEEEECCccccHHHHHHHHHHHccccCCCeEecCCCccHHHHHHHHHhC
Confidence 4444555555555555554442 113479999999999999999999994 4667789999999999999975
No 120
>PRK13317 pantothenate kinase; Provisional
Probab=95.05 E-value=0.29 Score=60.56 Aligned_cols=49 Identities=22% Similarity=0.268 Sum_probs=42.9
Q ss_pred CCCeEEEcC-CccchHHHHHHHHHHhC--CCcccccCCchhHHHhhHHHHHH
Q psy7639 328 AIHDVVLVG-GSTRIPKVQSLLQNFFC--GKSLNLSINPDEAVAYGAAVQAA 376 (2568)
Q Consensus 328 ~i~~ViLvG-G~sriP~v~~~l~~~f~--~~~v~~~~npdeaVA~GAa~~aa 376 (2568)
.++.|+++| |.++.|.+++.+.+++. +.++..+.||..+.|.|||+.|.
T Consensus 222 ~~~~Ivf~G~gla~n~~l~~~l~~~l~~~~~~~~~p~~~~~~gAlGAaL~a~ 273 (277)
T PRK13317 222 NIENIVYIGSTLTNNPLLQEIIESYTKLRNCTPIFLENGGYSGAIGALLLAT 273 (277)
T ss_pred CCCeEEEECcccccCHHHHHHHHHHHhcCCceEEecCCCchhHHHHHHHHhh
Confidence 357899999 79999999999999873 56778889999999999999875
No 121
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=94.10 E-value=0.11 Score=66.96 Aligned_cols=114 Identities=18% Similarity=0.251 Sum_probs=68.5
Q ss_pred eecHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCHHHHHHHHHHHH--------HcCCcEEEEecchhHHHHhhc
Q psy7639 110 TFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGA--------IAGLNVMRIVNEPTAAALAYG 181 (2568)
Q Consensus 110 ~~speel~a~~L~~l~~~ae~~l~~~~~~~VITVPa~f~~~qr~al~~Aa~--------~AGl~~~~li~Ep~AAAl~y~ 181 (2568)
.+..+.+-..+-...+..--..-.....-.+||.+...-.+-++.+..+.. .||++...++. |.|++.+..
T Consensus 62 ~ID~~~i~~~V~~ey~~Agi~~~die~~ahIITg~~~~~~Nl~~~v~~~~~~~gdfVVA~AG~~le~iva-~~ASg~avL 140 (475)
T PRK10719 62 EIDEAAIKELIEEEYQKAGIAPESIDSGAVIITGETARKENAREVVMALSGSAGDFVVATAGPDLESIIA-GKGAGAQTL 140 (475)
T ss_pred cccHHHHHHHHHHHHHHcCCCHHHccccEEEEEechhHHHHHHHHHHHhcccccceeeeccCccHHHhhh-HHHhhHHHh
Confidence 345555544444444332111111233457888887655554444443221 26666666666 888887765
Q ss_pred cccccCCCceEEEEEeCCcceEEEEeeecCCcEEEEEeecccccccccchHH
Q psy7639 182 LDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDN 233 (2568)
Q Consensus 182 ~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~ 233 (2568)
.+ +.+..++++|+||||+++++++ +|. +..+ +...+||+.+..
T Consensus 141 se---Eke~gVa~IDIGgGTT~iaVf~--~G~---l~~T-~~l~vGG~~IT~ 183 (475)
T PRK10719 141 SE---ERNTRVLNIDIGGGTANYALFD--AGK---VIDT-ACLNVGGRLIET 183 (475)
T ss_pred hh---hccCceEEEEeCCCceEEEEEE--CCE---EEEE-EEEecccceEEE
Confidence 32 5677899999999999999996 352 2222 236789988864
No 122
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related. These enzymes include L-fucolokinase (2.7.1.51 from EC) (gene fucK); gluconokinase (2.7.1.12 from EC) (gene gntK); glycerol kinase (2.7.1.30 from EC) (gene glpK); xylulokinase (2.7.1.17 from EC) (gene xylB); and L-xylulose kinase (2.7.1.53 from EC) (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. This entry represents the C-terminal domain of these proteins. It adopts a ribonuclease H-like fold and is structurally related to the N-terminal domain [, ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 4E1J_B 2W40_C 2W41_A 2UYT_A 2CGK_B 2CGL_A 2CGJ_A 3GBT_A 3LL3_B 3HZ6_A ....
Probab=94.06 E-value=0.077 Score=62.59 Aligned_cols=75 Identities=21% Similarity=0.351 Sum_probs=53.7
Q ss_pred HHHHhhhhhhhHHHHHHHHHHcCCC-CCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHH
Q psy7639 301 EELCSDLFRSTLQPVEKALQDAKLD-KSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAI 377 (2568)
Q Consensus 301 e~l~~~l~~~i~~~i~~~l~~a~~~-~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ 377 (2568)
.+++.-+++.+.-.++..++...-. ...++.|+++||.++.|.+.+++.+.| +.++... +..++.|.|||+.|+.
T Consensus 121 ~~~~rAv~Egia~~~~~~~~~l~~~~~~~~~~i~~~GG~~~n~~~~q~~Advl-~~~V~~~-~~~e~~a~GaA~~A~~ 196 (198)
T PF02782_consen 121 ADLARAVLEGIAFSLRQILEELEELTGIPIRRIRVSGGGAKNPLWMQILADVL-GRPVVRP-EVEEASALGAALLAAV 196 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCESEEEEESGGGGSHHHHHHHHHHH-TSEEEEE-SSSTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHhhhhccccccccceeeEeccccccChHHHHHHHHHh-CCceEeC-CCCchHHHHHHHHHHh
Confidence 4444445555554444444433111 234899999999999999999999999 6777654 4499999999999974
No 123
>KOG0676|consensus
Probab=94.05 E-value=0.31 Score=61.79 Aligned_cols=208 Identities=21% Similarity=0.259 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEecchhHHHHhhccccccCCCceEEEEEe
Q psy7639 118 SMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDL 197 (2568)
Q Consensus 118 a~~L~~l~~~ae~~l~~~~~~~VITVPa~f~~~qr~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~ 197 (2568)
..+++|+...-... .....-+++|=|..|...-|+.|.+..-.. +++-.+.=.--|.. |+..+ .+=+|+|+
T Consensus 82 e~iw~~if~~~L~~-~Pee~pvllte~pl~p~~nREk~tqi~FE~-fnvpa~yva~qavl--ya~g~-----ttG~VvD~ 152 (372)
T KOG0676|consen 82 EKIWHHLFYSELLV-APEEHPVLLTEPPLNPKANREKLTQIMFET-FNVPALYVAIQAVL--YASGR-----TTGLVVDS 152 (372)
T ss_pred HHHHHHHHHHhhcc-CcccCceEeecCCCCchHhHHHHHHHhhhh-cCccHhHHHHHHHH--HHcCC-----eeEEEEEc
Confidence 66677776221111 112246999999999999999988764332 33333221222323 44332 25699999
Q ss_pred CCcce-EEEEeeecCCcEEEEEeecccccccccchHHHHHHHHHHHHHhhhcccCC-CCHHHHHHHHHHHHHHHHhcCCC
Q psy7639 198 GGGTF-DVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMS-VNPRALRRLRTAAERAKRTLSSS 275 (2568)
Q Consensus 198 GggT~-Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~-~~~~~~~~L~~~aE~aK~~LS~~ 275 (2568)
|.|-+ -+-|++ | +.+...-....+||.++++-+...|.+ .+.... ...+. -++.+|+.+..-
T Consensus 153 G~gvt~~vPI~e---G--~~lp~ai~~ldl~G~dlt~~l~~~L~~-----~g~s~~~~~~~e------Iv~diKeklCyv 216 (372)
T KOG0676|consen 153 GDGVTHVVPIYE---G--YALPHAILRLDLAGRDLTDYLLKQLRK-----RGYSFTTSAEFE------IVRDIKEKLCYV 216 (372)
T ss_pred CCCceeeeeccc---c--cccchhhheecccchhhHHHHHHHHHh-----cccccccccHHH------HHHHhHhhhccc
Confidence 99966 455553 4 233333344779999999877666655 121111 11111 123333332210
Q ss_pred ------------CceEEEEe-eeccCcceEEeecHHHH---HHHHhhhh-----hhhHHHHHHHHHHc--CCCCCCCCeE
Q psy7639 276 ------------TEASIEID-ALYDGIDFYTKISRARF---EELCSDLF-----RSTLQPVEKALQDA--KLDKSAIHDV 332 (2568)
Q Consensus 276 ------------~~~~i~i~-~l~~~~d~~~~itR~ef---e~l~~~l~-----~~i~~~i~~~l~~a--~~~~~~i~~V 332 (2568)
....+... .+.++.- +.+.-+.| |-+++|.+ ..+-..+-..+.++ .+.+.-...|
T Consensus 217 ald~~~e~~~~~~~~~l~~~y~lPDg~~--i~i~~erf~~pE~lFqP~~~g~e~~gi~~~~~~sI~kcd~dlrk~L~~ni 294 (372)
T KOG0676|consen 217 ALDFEEEEETANTSSSLESSYELPDGQK--ITIGNERFRCPEVLFQPSLLGMESPGIHELTVNSIMKCDIDLRKDLYENI 294 (372)
T ss_pred ccccchhhhcccccccccccccCCCCCE--EecCCcccccchhcCChhhcCCCCCchhHHHHHHHHhCChhHhHHHHhhe
Confidence 01111111 0223322 45554444 33444322 22333344433333 3333347789
Q ss_pred EEcCCccchHHHHHHHHHHh
Q psy7639 333 VLVGGSTRIPKVQSLLQNFF 352 (2568)
Q Consensus 333 iLvGG~sriP~v~~~l~~~f 352 (2568)
+|+||++-.|.+.++|++.+
T Consensus 295 vLsGGtT~~pGl~~Rl~kEl 314 (372)
T KOG0676|consen 295 VLSGGTTMFPGLADRLQKEL 314 (372)
T ss_pred EEeCCcccchhHHHHHHHHH
Confidence 99999999999999998876
No 124
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related. These enzymes include L-fucolokinase (2.7.1.51 from EC) (gene fucK); gluconokinase (2.7.1.12 from EC) (gene gntK); glycerol kinase (2.7.1.30 from EC) (gene glpK); xylulokinase (2.7.1.17 from EC) (gene xylB); and L-xylulose kinase (2.7.1.53 from EC) (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. This entry represents the C-terminal domain of these proteins. It adopts a ribonuclease H-like fold and is structurally related to the N-terminal domain [, ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 4E1J_B 2W40_C 2W41_A 2UYT_A 2CGK_B 2CGL_A 2CGJ_A 3GBT_A 3LL3_B 3HZ6_A ....
Probab=93.98 E-value=0.099 Score=61.67 Aligned_cols=76 Identities=21% Similarity=0.333 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHccCC-ccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHH
Q psy7639 873 FEELCSDLFRSTLQPVEKALQDAKLD-KSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAI 950 (2568)
Q Consensus 873 fe~l~~~l~~~i~~~i~~~L~~a~~~-~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ 950 (2568)
..+++.-+++.+.-.++..++...-. ...++.|+++||.++.|.+.+++.+.| +.++... +..++.|.|||+.|+.
T Consensus 120 ~~~~~rAv~Egia~~~~~~~~~l~~~~~~~~~~i~~~GG~~~n~~~~q~~Advl-~~~V~~~-~~~e~~a~GaA~~A~~ 196 (198)
T PF02782_consen 120 RADLARAVLEGIAFSLRQILEELEELTGIPIRRIRVSGGGAKNPLWMQILADVL-GRPVVRP-EVEEASALGAALLAAV 196 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCESEEEEESGGGGSHHHHHHHHHHH-TSEEEEE-SSSTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHhhhhccccccccceeeEeccccccChHHHHHHHHHh-CCceEeC-CCCchHHHHHHHHHHh
Confidence 45556666666666666555544221 334899999999999999999999999 4666554 4499999999999974
No 125
>KOG0676|consensus
Probab=93.86 E-value=0.75 Score=58.42 Aligned_cols=205 Identities=22% Similarity=0.313 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCeEEEEEcCCCCHHHHHHHHHHH-HHcCCCeeeecchhHHHHHHhccccCCCCCceEEEEE
Q psy7639 691 SMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFD 769 (2568)
Q Consensus 691 a~iL~~L~~~ae~~~~~~~~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~l~li~Ep~AAAl~y~~~~~~~~~~~vlV~D 769 (2568)
..|..|+...--. ......-+++|-|..|...-|+.|.+.. +.-+.+-+.+ +..|.+ |+..+ .+=+|+|
T Consensus 82 e~iw~~if~~~L~-~~Pee~pvllte~pl~p~~nREk~tqi~FE~fnvpa~yv---a~qavl-ya~g~-----ttG~VvD 151 (372)
T KOG0676|consen 82 EKIWHHLFYSELL-VAPEEHPVLLTEPPLNPKANREKLTQIMFETFNVPALYV---AIQAVL-YASGR-----TTGLVVD 151 (372)
T ss_pred HHHHHHHHHHhhc-cCcccCceEeecCCCCchHhHHHHHHHhhhhcCccHhHH---HHHHHH-HHcCC-----eeEEEEE
Confidence 5555666521111 1122357999999999999998887764 3333333333 223333 54332 3579999
Q ss_pred eCCceeE-EEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHHHHhhhccCCC-CCHHHHHHHHHHHHHHHHhcCC
Q psy7639 770 LGGGTFD-VSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMS-VNPRALRRLRTAAERAKRTLSS 847 (2568)
Q Consensus 770 ~GgGT~D-vsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~-~~~~~~~~L~~~~E~aK~~LS~ 847 (2568)
+|.|-++ +-|+ +| +.+...-....+||+|+.+-|...|.+ .+.... ...+. -++.+|+.++.
T Consensus 152 ~G~gvt~~vPI~---eG--~~lp~ai~~ldl~G~dlt~~l~~~L~~-----~g~s~~~~~~~e------Iv~diKeklCy 215 (372)
T KOG0676|consen 152 SGDGVTHVVPIY---EG--YALPHAILRLDLAGRDLTDYLLKQLRK-----RGYSFTTSAEFE------IVRDIKEKLCY 215 (372)
T ss_pred cCCCceeeeecc---cc--cccchhhheecccchhhHHHHHHHHHh-----cccccccccHHH------HHHHhHhhhcc
Confidence 9999664 3444 35 344444455789999999866666655 121111 11111 12233333221
Q ss_pred C------------Ccceeeec-cccCCcceEEecchHhH---HHHHHHHH---------HhHHHHHHHHHHHccCCccCc
Q psy7639 848 S------------TEASIEID-ALYDGIDFYTKISRARF---EELCSDLF---------RSTLQPVEKALQDAKLDKSAI 902 (2568)
Q Consensus 848 ~------------~~~~i~i~-~l~~~~d~~~~itr~ef---e~l~~~l~---------~~i~~~i~~~L~~a~~~~~~I 902 (2568)
. ....+... .+.|+.. +.+.-+.| |-+++|-+ +.+...|.++ +..+.+.-.
T Consensus 216 vald~~~e~~~~~~~~~l~~~y~lPDg~~--i~i~~erf~~pE~lFqP~~~g~e~~gi~~~~~~sI~kc--d~dlrk~L~ 291 (372)
T KOG0676|consen 216 VALDFEEEEETANTSSSLESSYELPDGQK--ITIGNERFRCPEVLFQPSLLGMESPGIHELTVNSIMKC--DIDLRKDLY 291 (372)
T ss_pred cccccchhhhcccccccccccccCCCCCE--EecCCcccccchhcCChhhcCCCCCchhHHHHHHHHhC--ChhHhHHHH
Confidence 1 11111111 1333332 34443333 22333321 2223333333 333334446
Q ss_pred CeEEEEcCCCCcHHHHHHHHHHh
Q psy7639 903 HDVVLVGGSTRIPKVQSLLQNFF 925 (2568)
Q Consensus 903 ~~ViLvGGssriP~v~~~l~~~f 925 (2568)
..|+|+||+|..|.+.+++.+..
T Consensus 292 ~nivLsGGtT~~pGl~~Rl~kEl 314 (372)
T KOG0676|consen 292 ENIVLSGGTTMFPGLADRLQKEL 314 (372)
T ss_pred hheEEeCCcccchhHHHHHHHHH
Confidence 78999999999999999998765
No 126
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit. Members of this family are the Q subunit of one of two related types of four-subunit ATP-dependent benzoyl-CoA reductase. This enzyme system catalyzes the dearomatization of benzoyl-CoA, a common intermediate in pathways for the degradation for a number of different aromatic compounds, such as phenol and toluene.
Probab=93.58 E-value=0.16 Score=62.38 Aligned_cols=71 Identities=18% Similarity=0.224 Sum_probs=51.9
Q ss_pred HHHhhhhhhhHHHHHHHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCccc-ccCCchhHHHhhHHHHHHH
Q psy7639 302 ELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLN-LSINPDEAVAYGAAVQAAI 377 (2568)
Q Consensus 302 ~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~-~~~npdeaVA~GAa~~aa~ 377 (2568)
+++..++..+...+...++..++ -..|+|+||.++.|.+++.+++.+ +.++. .+.+|..+-|.|||++|..
T Consensus 217 dI~aGl~~sia~rv~~~~~~~~i----~~~v~~~GGva~N~~l~~al~~~L-g~~v~~~p~~p~~~GAlGAAL~A~~ 288 (293)
T TIGR03192 217 MVIAAYCQAMAERVVSLLERIGV----EEGFFITGGIAKNPGVVKRIERIL-GIKAVDTKIDSQIAGALGAALFGYT 288 (293)
T ss_pred HHHHHHHHHHHHHHHHHhcccCC----CCCEEEECcccccHHHHHHHHHHh-CCCceeCCCCccHHHHHHHHHHHHH
Confidence 34444455555444444444332 236899999999999999999999 55655 5778999999999999864
No 127
>COG1069 AraB Ribulose kinase [Energy production and conversion]
Probab=92.62 E-value=1.3 Score=57.89 Aligned_cols=184 Identities=20% Similarity=0.225 Sum_probs=107.0
Q ss_pred eEEEEEeCCcceEEEEeeecC------CcEEEEEeecccccccccchHHHHHHHHHHHHH---------hhhcccCCCCH
Q psy7639 191 NVLIFDLGGGTFDVSILSIDE------GALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFK---------RKYKKDMSVNP 255 (2568)
Q Consensus 191 ~vlV~D~GggT~Dvsv~~~~~------~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~---------~~~~~~~~~~~ 255 (2568)
.-|++=+|-+|.++.+-+-.. |.....+-.+.-..-||..-.=.|++||.+... .+++..+ ..
T Consensus 269 ~~l~~I~GTStC~m~~s~~~~~v~GvwGpy~~ai~Pg~~~~EgGQSatG~l~dhl~~~h~~~~e~~~~~~~~~~~~--~~ 346 (544)
T COG1069 269 GSLAMIAGTSTCHMLLSEKPRFVPGVWGPYDGAVLPGLWLYEGGQSATGDLLDHLVRTHPAPLEQLAAHPKDGEEI--YE 346 (544)
T ss_pred CeEEEEeccceEEEEecCCceecCccccccccccCcchhhhcccchhhhHHHHHHHHhCCcccchhhccchhhhHH--HH
Confidence 345555777777777654321 112222222222344788888888888877631 1111110 11
Q ss_pred HHHHHHHHHHHHHHHhcCCCCceEEEEeeecc------CcceE-------EeecHHHHHHHHhhhhhhhH---HHHHHHH
Q psy7639 256 RALRRLRTAAERAKRTLSSSTEASIEIDALYD------GIDFY-------TKISRARFEELCSDLFRSTL---QPVEKAL 319 (2568)
Q Consensus 256 ~~~~~L~~~aE~aK~~LS~~~~~~i~i~~l~~------~~d~~-------~~itR~efe~l~~~l~~~i~---~~i~~~l 319 (2568)
....++..-+++.+...+....- +-++.+.+ +.+.+ +.-+.+.+..+....+.-+. ..|-+++
T Consensus 347 ~~~~~~~~l~~~~~~~~~l~~~l-~~l~~f~GNRsP~aDp~l~G~i~GltL~T~~~~l~~lY~a~l~a~A~GtR~Iie~~ 425 (544)
T COG1069 347 SLAQRLELLTEAAAAIPPLASGL-HVLDWFNGNRSPLADPRLKGVITGLTLDTSPESLALLYRALLEATAFGTRAIIETF 425 (544)
T ss_pred HHHHHHHHHHhhHhccCcccCCc-EecccccCCcCCCCCccceeEEeccccCCCcHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 23344555556666666443322 22222211 11122 22234444455555555443 3455666
Q ss_pred HHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHcCCC
Q psy7639 320 QDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQ 382 (2568)
Q Consensus 320 ~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls~~~ 382 (2568)
++.|+ .|+.|.+.||..+.|.+.+.+.+.. +.++..+ ..++++++|+|+.|+.-.|.+
T Consensus 426 ~~~g~---~Id~l~~sGG~~KN~llmql~aDvt-g~~v~i~-~s~~a~llGsAm~~avAag~~ 483 (544)
T COG1069 426 EDQGI---AIDTLFASGGIRKNPLLMQLYADVT-GRPVVIP-ASDQAVLLGAAMFAAVAAGVH 483 (544)
T ss_pred HHcCC---eeeEEEecCCcccCHHHHHHHHHhc-CCeEEee-cccchhhhHHHHHHHHHhccC
Confidence 66664 5899999999999999999999988 5666544 789999999999999776654
No 128
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase. This model represents a subfamily of the FGGY family of carbohydrate kinases. This subfamily is closely related to a set of ribulose kinases, and many members are designated ribitol kinase. However, the member from Klebsiella pneumoniae, from a ribitol catabolism operon, accepts D-ribulose and to a lesser extent D-arabinitol and ribitol (PubMed:9639934 and JW Lengeler, personal communication); its annotation in GenBank as ribitol kinase is imprecise and may have affected public annotation of related proteins.
Probab=91.76 E-value=0.35 Score=66.19 Aligned_cols=85 Identities=18% Similarity=0.221 Sum_probs=64.6
Q ss_pred ecHHHHHHHHhhhhhhhHHHHHHHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHH
Q psy7639 295 ISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQ 374 (2568)
Q Consensus 295 itR~efe~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~ 374 (2568)
-+|.++..++.-+++.+.-.++.+++...-....++.|.++||+++++...+.+.+.+ +.++.... -.|+.++|||+.
T Consensus 410 ~~~~~~~~~~rAvlEgiaf~~r~~~e~l~~~g~~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~~-~~e~~alGaA~l 487 (541)
T TIGR01315 410 RSKDGLALLYYATMEFIAYGTRQIVEAMNTAGHTIKSIFMSGGQCQNPLLMQLIADAC-DMPVLIPY-VNEAVLHGAAML 487 (541)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccEEEEecCcccCHHHHHHHHHHH-CCeeEecC-hhHHHHHHHHHH
Confidence 3577777788888887776666555543211224789999999999999999999999 78886654 456889999999
Q ss_pred HHHHcCC
Q psy7639 375 AAILSGD 381 (2568)
Q Consensus 375 aa~ls~~ 381 (2568)
|+.-.|.
T Consensus 488 A~~~~G~ 494 (541)
T TIGR01315 488 GAKAAGT 494 (541)
T ss_pred HHHhcCc
Confidence 9876654
No 129
>PRK15027 xylulokinase; Provisional
Probab=91.44 E-value=0.35 Score=65.41 Aligned_cols=62 Identities=24% Similarity=0.362 Sum_probs=50.3
Q ss_pred HHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHcCCC
Q psy7639 317 KALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQ 382 (2568)
Q Consensus 317 ~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls~~~ 382 (2568)
+.+++.+. .++.|+++||+++++...+++.+.+ +.++....+.+++.++|||+.|+.-.|.+
T Consensus 378 ~~l~~~g~---~~~~i~~~GGga~s~~w~Qi~Adv~-g~pv~~~~~~~~~~a~GaA~lA~~~~G~~ 439 (484)
T PRK15027 378 DVVHACGI---KPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLAQIAANPE 439 (484)
T ss_pred HHHHHcCC---CccEEEEeCcccCCHHHHHHHHHHh-CCeEEeecCCCcchHHHHHHHHHHhcCCc
Confidence 44444443 4789999999999999999999999 78886666777789999999999776653
No 130
>PLN02669 xylulokinase
Probab=91.04 E-value=0.43 Score=65.31 Aligned_cols=72 Identities=14% Similarity=0.266 Sum_probs=53.2
Q ss_pred HHhhhhhhhHHHHHHHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHH
Q psy7639 303 LCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAI 377 (2568)
Q Consensus 303 l~~~l~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ 377 (2568)
+++-+++.+.-.++..++..+.. ..++.|+++||+|+++.+.+.+.+.| +.++... +..++.|+|||+.|+.
T Consensus 421 ~~RAvlEg~a~~~r~~~~~l~~~-~~~~~i~~~GGgs~s~~w~Qi~ADVl-g~pV~~~-~~~ea~alGAA~~A~~ 492 (556)
T PLN02669 421 EVRAIIEGQFLSMRAHAERFGMP-VPPKRIIATGGASANQSILKLIASIF-GCDVYTV-QRPDSASLGAALRAAH 492 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEcChhcCHHHHHHHHHHc-CCCeEec-CCCCchHHHHHHHHHH
Confidence 34455555555555555544432 35889999999999999999999999 5677654 4447889999999985
No 131
>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3.5.2.9 from EC). Both reactions involve the hydrolysis of 5-membered rings via hydrolysis of their internal imide bonds [].; GO: 0016787 hydrolase activity; PDB: 3C0B_C 3CET_B.
Probab=90.93 E-value=0.33 Score=60.72 Aligned_cols=68 Identities=18% Similarity=0.119 Sum_probs=12.7
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHH
Q psy7639 1672 LCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAV 1742 (2568)
Q Consensus 1672 l~~pli~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai 1742 (2568)
+++-..+++.+.|+++....+..+.+.. ++.+||.+ |++-..+.+.++-+.+..+..|.-+-|+||++
T Consensus 216 i~~~~~~~m~~~i~~~~~~~g~~~~~~~-lv~~GG~g--~~~~~~la~~lg~~~v~~p~~~~v~~A~Ga~~ 283 (290)
T PF01968_consen 216 IVRIANENMADAIREVSVERGYDPRDFP-LVAFGGAG--PLHAPELAEELGIPRVVPPHYAGVANAIGAAV 283 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT--EEEE--------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCccccc-cccccccc--cccccccccccccccccccccccccccccccc
Confidence 3334445555555555545566654422 55666665 78888888888766676666678889999984
No 132
>PRK15027 xylulokinase; Provisional
Probab=90.90 E-value=0.49 Score=64.01 Aligned_cols=77 Identities=21% Similarity=0.263 Sum_probs=53.9
Q ss_pred HHHHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHHcC
Q psy7639 876 LCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSG 953 (2568)
Q Consensus 876 l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ls~ 953 (2568)
+++-+++.+.-.++..++...-....++.|+++||+++++...+++.+.| +.++....+.+++.++|||+.|+.-.|
T Consensus 361 l~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GGga~s~~w~Qi~Adv~-g~pv~~~~~~~~~~a~GaA~lA~~~~G 437 (484)
T PRK15027 361 LARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLAQIAAN 437 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccEEEEeCcccCCHHHHHHHHHHh-CCeEEeecCCCcchHHHHHHHHHHhcC
Confidence 33344444443333333322211224789999999999999999999999 677755556777899999999987655
No 133
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase. This model represents a subfamily of the FGGY family of carbohydrate kinases. This subfamily is closely related to a set of ribulose kinases, and many members are designated ribitol kinase. However, the member from Klebsiella pneumoniae, from a ribitol catabolism operon, accepts D-ribulose and to a lesser extent D-arabinitol and ribitol (PubMed:9639934 and JW Lengeler, personal communication); its annotation in GenBank as ribitol kinase is imprecise and may have affected public annotation of related proteins.
Probab=90.88 E-value=0.58 Score=64.12 Aligned_cols=85 Identities=18% Similarity=0.223 Sum_probs=64.4
Q ss_pred ecchHhHHHHHHHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHH
Q psy7639 867 KISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAV 946 (2568)
Q Consensus 867 ~itr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl 946 (2568)
.-+|..+..++.-+++.+.=.++.+++...-....++.|.++||.++++...+++.+.+ +.++.... ..|+.++|||+
T Consensus 409 ~~~~~~~~~~~rAvlEgiaf~~r~~~e~l~~~g~~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~~-~~e~~alGaA~ 486 (541)
T TIGR01315 409 DRSKDGLALLYYATMEFIAYGTRQIVEAMNTAGHTIKSIFMSGGQCQNPLLMQLIADAC-DMPVLIPY-VNEAVLHGAAM 486 (541)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccEEEEecCcccCHHHHHHHHHHH-CCeeEecC-hhHHHHHHHHH
Confidence 33566777788888887776666666544322234889999999999999999999999 67776554 45688999999
Q ss_pred HHHHHcC
Q psy7639 947 QAAILSG 953 (2568)
Q Consensus 947 ~aa~ls~ 953 (2568)
.|+.-.|
T Consensus 487 lA~~~~G 493 (541)
T TIGR01315 487 LGAKAAG 493 (541)
T ss_pred HHHHhcC
Confidence 9987655
No 134
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional
Probab=90.86 E-value=2.4 Score=57.35 Aligned_cols=110 Identities=19% Similarity=0.192 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCceEEEEechhHHHHHhhccccccCcceEEEEEeC
Q psy7639 1488 MVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLG 1567 (2568)
Q Consensus 1488 ~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~G 1567 (2568)
..|+.+++.+.. ++.....+|=|=-.-=-.....++.++-+..|+++..|=-|=+|--.+.+...........+|+|+|
T Consensus 62 ~~L~~F~~~~~~-~~v~~i~~vATsAvReA~N~~~fl~~i~~~tGl~ievIsG~eEA~l~~~gv~~~l~~~~~~lviDIG 140 (496)
T PRK11031 62 QCLRLFAERLQD-IPPSQIRVVATATLRLAVNADEFLAKAQEILGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIG 140 (496)
T ss_pred HHHHHHHHHHHh-CCCCeEEEEEeHHHHcCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHhhhhccCCCCCEEEEEec
Confidence 445555555533 3333233333322222344667788888889999965444555544444443332223468999999
Q ss_pred CcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHH
Q psy7639 1568 GGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRL 1604 (2568)
Q Consensus 1568 GGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l 1604 (2568)
||++.+++++ ++.. ..... -.+|...+.+.+
T Consensus 141 GGStEl~~~~--~~~~---~~~~S-l~lG~vrl~e~f 171 (496)
T PRK11031 141 GASTELVTGT--GAQA---TSLFS-LSMGCVTWLERY 171 (496)
T ss_pred CCeeeEEEec--CCce---eeeeE-EeccchHHHHHh
Confidence 9999999987 5532 22222 236766554443
No 135
>PLN02669 xylulokinase
Probab=90.71 E-value=0.59 Score=63.98 Aligned_cols=72 Identities=14% Similarity=0.254 Sum_probs=53.3
Q ss_pred HHHHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHH
Q psy7639 876 LCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAI 950 (2568)
Q Consensus 876 l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ 950 (2568)
+++.+++.+.=.++..++..+.. ..++.|+++||+|+.|.+.+++.+.| +.++...- ..++.|+|||+.|+.
T Consensus 421 ~~RAvlEg~a~~~r~~~~~l~~~-~~~~~i~~~GGgs~s~~w~Qi~ADVl-g~pV~~~~-~~ea~alGAA~~A~~ 492 (556)
T PLN02669 421 EVRAIIEGQFLSMRAHAERFGMP-VPPKRIIATGGASANQSILKLIASIF-GCDVYTVQ-RPDSASLGAALRAAH 492 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEcChhcCHHHHHHHHHHc-CCCeEecC-CCCchHHHHHHHHHH
Confidence 45555555555555555554432 35889999999999999999999999 45666544 447889999999986
No 136
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T.
Probab=90.54 E-value=0.67 Score=50.03 Aligned_cols=30 Identities=17% Similarity=0.339 Sum_probs=21.7
Q ss_pred EEEEEeCCcceEEEEeeecCCcEEEEEeec
Q psy7639 192 VLIFDLGGGTFDVSILSIDEGALFEVRSTA 221 (2568)
Q Consensus 192 vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~ 221 (2568)
|+++|+|++++.+++++......++++..+
T Consensus 1 i~~iDiGs~~~~~~i~~~~~~~~~~vl~~g 30 (120)
T PF14450_consen 1 IVVIDIGSSKTKVAIAEDGSDGYIRVLGVG 30 (120)
T ss_dssp EEEEEE-SSSEEEEEEETTEEEEEEEES--
T ss_pred CEEEEcCCCcEEEEEEEeCCCCcEEEEEEe
Confidence 679999999999999998555455666544
No 137
>COG1069 AraB Ribulose kinase [Energy production and conversion]
Probab=90.44 E-value=3.5 Score=54.01 Aligned_cols=183 Identities=20% Similarity=0.208 Sum_probs=102.5
Q ss_pred eEEEEEeCCceeEEEEEEEc---C---CcEEEEEeeccCCCCccchHHHHHHHHHHHHHH---------hhhccCCCCCH
Q psy7639 764 NVLIFDLGGGTFDVSILSID---E---GALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFK---------RKYKKDMSVNP 828 (2568)
Q Consensus 764 ~vlV~D~GgGT~Dvsv~~~~---~---~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~---------~~~~~~~~~~~ 828 (2568)
+-|++=+|-+|+++.+-.-. . |.....+-...-..=||+.-.-.|.+||.+... .+++.. ...
T Consensus 269 ~~l~~I~GTStC~m~~s~~~~~v~GvwGpy~~ai~Pg~~~~EgGQSatG~l~dhl~~~h~~~~e~~~~~~~~~~~--~~~ 346 (544)
T COG1069 269 GSLAMIAGTSTCHMLLSEKPRFVPGVWGPYDGAVLPGLWLYEGGQSATGDLLDHLVRTHPAPLEQLAAHPKDGEE--IYE 346 (544)
T ss_pred CeEEEEeccceEEEEecCCceecCccccccccccCcchhhhcccchhhhHHHHHHHHhCCcccchhhccchhhhH--HHH
Confidence 34566678778777765421 1 111111211212234677777778888876531 111110 011
Q ss_pred HHHHHHHHHHHHHHHhcCCCCcceeeeccccC------Ccc-------eEEecchHhHHHHHHHHHHhHHH---HHHHHH
Q psy7639 829 RALRRLRTAAERAKRTLSSSTEASIEIDALYD------GID-------FYTKISRARFEELCSDLFRSTLQ---PVEKAL 892 (2568)
Q Consensus 829 ~~~~~L~~~~E~aK~~LS~~~~~~i~i~~l~~------~~d-------~~~~itr~efe~l~~~l~~~i~~---~i~~~L 892 (2568)
....++..-+++++...+..... +-++.+.. +.+ ++..=+.+.+-.+..-++.-+.- .|-+++
T Consensus 347 ~~~~~~~~l~~~~~~~~~l~~~l-~~l~~f~GNRsP~aDp~l~G~i~GltL~T~~~~l~~lY~a~l~a~A~GtR~Iie~~ 425 (544)
T COG1069 347 SLAQRLELLTEAAAAIPPLASGL-HVLDWFNGNRSPLADPRLKGVITGLTLDTSPESLALLYRALLEATAFGTRAIIETF 425 (544)
T ss_pred HHHHHHHHHHhhHhccCcccCCc-EecccccCCcCCCCCccceeEEeccccCCCcHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 23445555566666666443322 22222221 111 12222334343555555554433 344444
Q ss_pred HHccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHHcCC
Q psy7639 893 QDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGD 954 (2568)
Q Consensus 893 ~~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ls~~ 954 (2568)
++.+ -.|+.|+..||-.+.|.+.+.+.+.. +.++..+ ..++++++|+|+.|+.-.+.
T Consensus 426 ~~~g---~~Id~l~~sGG~~KN~llmql~aDvt-g~~v~i~-~s~~a~llGsAm~~avAag~ 482 (544)
T COG1069 426 EDQG---IAIDTLFASGGIRKNPLLMQLYADVT-GRPVVIP-ASDQAVLLGAAMFAAVAAGV 482 (544)
T ss_pred HHcC---CeeeEEEecCCcccCHHHHHHHHHhc-CCeEEee-cccchhhhHHHHHHHHHhcc
Confidence 4544 45999999999999999999999998 4555443 78899999999999976654
No 138
>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3.5.2.9 from EC). Both reactions involve the hydrolysis of 5-membered rings via hydrolysis of their internal imide bonds [].; GO: 0016787 hydrolase activity; PDB: 3C0B_C 3CET_B.
Probab=89.63 E-value=1 Score=56.53 Aligned_cols=66 Identities=18% Similarity=0.111 Sum_probs=11.4
Q ss_pred HHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHH
Q psy7639 878 SDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAV 946 (2568)
Q Consensus 878 ~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl 946 (2568)
+-..+++.+.|+++....+.++.+. .++.+||.+ |++...|.+.++-..+..+..+.-+-|.||++
T Consensus 218 ~~~~~~m~~~i~~~~~~~g~~~~~~-~lv~~GG~g--~~~~~~la~~lg~~~v~~p~~~~v~~A~Ga~~ 283 (290)
T PF01968_consen 218 RIANENMADAIREVSVERGYDPRDF-PLVAFGGAG--PLHAPELAEELGIPRVVPPHYAGVANAIGAAV 283 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHT--EEEE--------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhhCCCcccc-ccccccccc--cccccccccccccccccccccccccccccccc
Confidence 3344455555555544446555432 245556665 77777777777656666666678899999985
No 139
>KOG2517|consensus
Probab=88.81 E-value=3.3 Score=54.58 Aligned_cols=79 Identities=23% Similarity=0.326 Sum_probs=58.1
Q ss_pred HHHHhhhhhhhHHHHHHHHHHcCCCC-CCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHc
Q psy7639 301 EELCSDLFRSTLQPVEKALQDAKLDK-SAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 379 (2568)
Q Consensus 301 e~l~~~l~~~i~~~i~~~l~~a~~~~-~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls 379 (2568)
+.++.-.++.+.--++..|+...... ..|+.+.+.||.|+-|.+.+.+.+.+ +.++..+.++|. |+.|||+.|+..+
T Consensus 386 ~hia~A~leai~fqtr~Il~am~~~~~~~i~~L~~~GG~s~N~ll~Q~~ADi~-g~pv~~p~~~e~-~~~GaA~l~~~a~ 463 (516)
T KOG2517|consen 386 EHLARAALEAIAFQTREILEAMERDGGHPISTLRVCGGLSKNPLLMQLQADIL-GLPVVRPQDVEA-VALGAAMLAGAAS 463 (516)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeeccccccCHHHHHHHHHHh-CCccccccchhH-HHHHHHHHHHhhc
Confidence 33333444444444444443332222 46888999999999999999999999 688888888888 9999999999888
Q ss_pred CC
Q psy7639 380 GD 381 (2568)
Q Consensus 380 ~~ 381 (2568)
+.
T Consensus 464 ~~ 465 (516)
T KOG2517|consen 464 GK 465 (516)
T ss_pred CC
Confidence 76
No 140
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T.
Probab=88.62 E-value=0.96 Score=48.83 Aligned_cols=49 Identities=14% Similarity=0.290 Sum_probs=27.8
Q ss_pred EEEEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCc--cchHH--HHHHHHHH
Q psy7639 765 VLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLG--GEDFD--NRLVSHLA 813 (2568)
Q Consensus 765 vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lG--G~~~D--~~l~~~l~ 813 (2568)
|+++|+|++++.+.+++......+.++..+.-+..| |..+. +.+.+-+.
T Consensus 1 i~~iDiGs~~~~~~i~~~~~~~~~~vl~~g~~~s~gi~~g~Itd~~~i~~~i~ 53 (120)
T PF14450_consen 1 IVVIDIGSSKTKVAIAEDGSDGYIRVLGVGEVPSKGIKGGHITDIEDISKAIK 53 (120)
T ss_dssp EEEEEE-SSSEEEEEEETTEEEEEEEES----------HHHHH--HHHHHHHT
T ss_pred CEEEEcCCCcEEEEEEEeCCCCcEEEEEEecccccccCCCEEEEHHHHHHHHH
Confidence 578999999999999997544356666533222211 55665 54444443
No 141
>TIGR02628 fuculo_kin_coli L-fuculokinase. Members of this family are L-fuculokinase, from the clade that includes the L-fuculokinase of Escherichia coli. This enzyme catalyzes the second step in fucose catabolism. This family belongs to FGGY family of carbohydrate kinases (pfam02782, pfam00370). It is encoded by the kinase (K) gene of the fucose (fuc) operon.
Probab=88.61 E-value=1.1 Score=60.21 Aligned_cols=76 Identities=14% Similarity=0.212 Sum_probs=54.0
Q ss_pred HHhhhhhhhHHHHH---HHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHc
Q psy7639 303 LCSDLFRSTLQPVE---KALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 379 (2568)
Q Consensus 303 l~~~l~~~i~~~i~---~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls 379 (2568)
+++-+++.+.-.++ +.+++.+. ..++.|.++||++++|...+.+.+.| +.++...-+ .++.++|||+.|+.-.
T Consensus 367 l~rAvlEgia~~~r~~~e~l~~~~~--~~~~~i~~~GGga~s~~w~Qi~Adv~-g~pV~~~~~-~e~~~lGaA~~a~~a~ 442 (465)
T TIGR02628 367 IYRAALEGLTAQLKRNLQMLEQIGQ--FKASELLLVGGGSKNTLWNQIRANML-DIPVKVVDD-AETTVAGAAMFGFYGV 442 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC--CCcceEEEecCccCCHHHHHHhhhhc-CCeeEeccC-CcchHHHHHHHHHHhc
Confidence 44444444443333 44444431 24788999999999999999999999 688865444 5788999999999776
Q ss_pred CCC
Q psy7639 380 GDQ 382 (2568)
Q Consensus 380 ~~~ 382 (2568)
|.+
T Consensus 443 G~~ 445 (465)
T TIGR02628 443 GEY 445 (465)
T ss_pred Ccc
Confidence 643
No 142
>TIGR01311 glycerol_kin glycerol kinase. This model describes glycerol kinase, a member of the FGGY family of carbohydrate kinases.
Probab=88.13 E-value=0.84 Score=61.94 Aligned_cols=53 Identities=23% Similarity=0.244 Sum_probs=45.1
Q ss_pred CCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHcCCC
Q psy7639 328 AIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQ 382 (2568)
Q Consensus 328 ~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls~~~ 382 (2568)
.++.|.++||++|++...+++.+.| +.++.. .+..|+.|+|||+.|+.-.|.+
T Consensus 399 ~~~~i~~~GGga~s~~w~Qi~ADv~-g~pv~~-~~~~e~~alGaA~~a~~~~G~~ 451 (493)
T TIGR01311 399 EITKLRVDGGMTNNNLLMQFQADIL-GVPVVR-PKVTETTALGAAYAAGLAVGYW 451 (493)
T ss_pred CCceEEEecccccCHHHHHHHHHhc-CCeeEe-cCCCcchHHHHHHHHHhhcCcC
Confidence 4789999999999999999999999 778865 4556788999999998776643
No 143
>PRK00047 glpK glycerol kinase; Provisional
Probab=87.91 E-value=0.98 Score=61.38 Aligned_cols=78 Identities=15% Similarity=0.152 Sum_probs=54.4
Q ss_pred HHhhhhhhhHHHHHHHHHHcC-CCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHcCC
Q psy7639 303 LCSDLFRSTLQPVEKALQDAK-LDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGD 381 (2568)
Q Consensus 303 l~~~l~~~i~~~i~~~l~~a~-~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls~~ 381 (2568)
+++-+++.+.-.++..++... .....++.|.++||++++|...+.+.+.| +.++.. .+..|+.|+|||+.|+.-.|.
T Consensus 377 l~rAvlEgia~~~r~~~e~l~~~~g~~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~-~~~~e~~a~GaA~~A~~~~G~ 454 (498)
T PRK00047 377 IIRATLESIAYQTRDVLDAMQADSGIRLKELRVDGGAVANNFLMQFQADIL-GVPVER-PVVAETTALGAAYLAGLAVGF 454 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEecCcccCHHHHHHHHHhh-CCeeEe-cCcccchHHHHHHHHhhhcCc
Confidence 444445555444444433221 11124789999999999999999999999 678764 355678899999999877664
Q ss_pred C
Q psy7639 382 Q 382 (2568)
Q Consensus 382 ~ 382 (2568)
+
T Consensus 455 ~ 455 (498)
T PRK00047 455 W 455 (498)
T ss_pred C
Confidence 3
No 144
>PTZ00294 glycerol kinase-like protein; Provisional
Probab=87.89 E-value=1 Score=61.27 Aligned_cols=78 Identities=15% Similarity=0.246 Sum_probs=54.0
Q ss_pred HHhhhhhhhHHHHHHHHHHcCC-CCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHcCC
Q psy7639 303 LCSDLFRSTLQPVEKALQDAKL-DKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGD 381 (2568)
Q Consensus 303 l~~~l~~~i~~~i~~~l~~a~~-~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls~~ 381 (2568)
++.-+++.+.-.++..++...- ....++.|.++||+++++...+.+.+.| +.++... +..|+.++|||+.|+.-.|.
T Consensus 380 i~rAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GG~a~s~~w~Qi~Adv~-g~pV~~~-~~~e~~alGaAl~aa~a~G~ 457 (504)
T PTZ00294 380 IVRAALEAIALQTNDVIESMEKDAGIELNSLRVDGGLTKNKLLMQFQADIL-GKDIVVP-EMAETTALGAALLAGLAVGV 457 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCcceEEEecccccCHHHHHHHHHHh-CCceEec-CcccchHHHHHHHHHhhcCc
Confidence 3444444444444444432211 0123789999999999999999999999 7777654 46668899999999877665
Q ss_pred C
Q psy7639 382 Q 382 (2568)
Q Consensus 382 ~ 382 (2568)
+
T Consensus 458 ~ 458 (504)
T PTZ00294 458 W 458 (504)
T ss_pred c
Confidence 3
No 145
>TIGR01311 glycerol_kin glycerol kinase. This model describes glycerol kinase, a member of the FGGY family of carbohydrate kinases.
Probab=87.83 E-value=0.96 Score=61.36 Aligned_cols=78 Identities=17% Similarity=0.204 Sum_probs=54.2
Q ss_pred HHHHHHHHHhHHHHHHHHHHHccC-CccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHHc
Q psy7639 874 EELCSDLFRSTLQPVEKALQDAKL-DKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 952 (2568)
Q Consensus 874 e~l~~~l~~~i~~~i~~~L~~a~~-~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ls 952 (2568)
..++.-+++.+.-.++..++...- ....++.|.++||.++++...+++.+.| +.++.. .+..|+.|+|||+.|+.-.
T Consensus 371 ~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GGga~s~~w~Qi~ADv~-g~pv~~-~~~~e~~alGaA~~a~~~~ 448 (493)
T TIGR01311 371 AHIARAALEAIAFQTRDVLEAMEKDAGVEITKLRVDGGMTNNNLLMQFQADIL-GVPVVR-PKVTETTALGAAYAAGLAV 448 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEecccccCHHHHHHHHHhc-CCeeEe-cCCCcchHHHHHHHHHhhc
Confidence 334444455554444444443321 1224789999999999999999999999 577755 4556788999999998765
Q ss_pred C
Q psy7639 953 G 953 (2568)
Q Consensus 953 ~ 953 (2568)
|
T Consensus 449 G 449 (493)
T TIGR01311 449 G 449 (493)
T ss_pred C
Confidence 5
No 146
>TIGR01312 XylB D-xylulose kinase. D-xylulose kinase (XylB) generally is found with xylose isomerase (XylA) and acts in xylose utilization.
Probab=87.68 E-value=1.1 Score=60.77 Aligned_cols=53 Identities=30% Similarity=0.603 Sum_probs=45.4
Q ss_pred CCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHcCCC
Q psy7639 328 AIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQ 382 (2568)
Q Consensus 328 ~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls~~~ 382 (2568)
.++.|.++||+++++.+.+++.+.| +.++... +..++.++|||+.|+.-.+.+
T Consensus 390 ~~~~i~~~GG~s~s~~~~Q~~Adv~-g~pv~~~-~~~e~~a~GaA~~a~~~~g~~ 442 (481)
T TIGR01312 390 PIQSIRLIGGGAKSPAWRQMLADIF-GTPVDVP-EGEEGPALGAAILAAWALGEK 442 (481)
T ss_pred CcceEEEeccccCCHHHHHHHHHHh-CCceeec-CCCcchHHHHHHHHHHhcCCC
Confidence 4789999999999999999999999 6777654 567789999999999876643
No 147
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]
Probab=87.35 E-value=27 Score=46.88 Aligned_cols=99 Identities=19% Similarity=0.254 Sum_probs=61.5
Q ss_pred eecHHHHHHHHHHHHHHHHHHHhCCCCCeEE-EEecCCC-CHHHHHHHHHHHHHcCCcEEEEecchhHHHHhhccccccC
Q psy7639 110 TFAPEEISSMVLTKMKETAEAYLGHSVRDAV-ITVPAYF-NDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLK 187 (2568)
Q Consensus 110 ~~speel~a~~L~~l~~~ae~~l~~~~~~~V-ITVPa~f-~~~qr~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~~~~ 187 (2568)
.+++ +-+...+..|+..++..-+..+.++. ++.-|.= -.+.-+.+..+-+..|+++-.+=-|-+|=-.++|.-..++
T Consensus 48 ~L~~-eai~R~~~aL~~f~e~~~~~~~~~v~~vATsA~R~A~N~~eFl~rv~~~~G~~ievIsGeeEArl~~lGv~~~~~ 126 (492)
T COG0248 48 NLSE-EAIERALSALKRFAELLDGFGAEEVRVVATSALRDAPNGDEFLARVEKELGLPIEVISGEEEARLIYLGVASTLP 126 (492)
T ss_pred CcCH-HHHHHHHHHHHHHHHHHhhCCCCEEEEehhHHHHcCCCHHHHHHHHHHHhCCceEEeccHHHHHHHHHHHHhcCC
Confidence 3444 44556666666666655555666632 2211111 1223355677778889987555556666555556655555
Q ss_pred CCceEEEEEeCCcceEEEEeee
Q psy7639 188 GERNVLIFDLGGGTFDVSILSI 209 (2568)
Q Consensus 188 ~~~~vlV~D~GggT~Dvsv~~~ 209 (2568)
.....+|+|+|||+|.+++..-
T Consensus 127 ~~~~~lv~DIGGGStEl~~g~~ 148 (492)
T COG0248 127 RKGDGLVIDIGGGSTELVLGDN 148 (492)
T ss_pred CCCCEEEEEecCCeEEEEEecC
Confidence 4778999999999999999863
No 148
>PRK04123 ribulokinase; Provisional
Probab=87.32 E-value=1 Score=62.04 Aligned_cols=74 Identities=20% Similarity=0.446 Sum_probs=53.3
Q ss_pred HHhhhhhhhHHHHH---HHHHHcCCCCCCCCeEEEcCCc-cchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHH
Q psy7639 303 LCSDLFRSTLQPVE---KALQDAKLDKSAIHDVVLVGGS-TRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAIL 378 (2568)
Q Consensus 303 l~~~l~~~i~~~i~---~~l~~a~~~~~~i~~ViLvGG~-sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~l 378 (2568)
+++-+++.+.-.++ +.|++.+. .++.|.++||+ ++++...+.+.+.| +.++.. ..+.|+.|+|||+.|+.-
T Consensus 413 l~RAvlEgia~~~~~~~e~l~~~g~---~~~~i~~~GGg~s~s~~w~Qi~ADv~-g~pV~~-~~~~e~~alGaA~lA~~~ 487 (548)
T PRK04123 413 IYRALIEATAFGTRAIMECFEDQGV---PVEEVIAAGGIARKNPVLMQIYADVL-NRPIQV-VASDQCPALGAAIFAAVA 487 (548)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC---CcceEEEeCCCcccCHHHHHHHHHhc-CCceEe-cCccccchHHHHHHHHHH
Confidence 34444444443333 34444442 47889999999 99999999999999 677754 356678899999999876
Q ss_pred cCC
Q psy7639 379 SGD 381 (2568)
Q Consensus 379 s~~ 381 (2568)
.|.
T Consensus 488 ~G~ 490 (548)
T PRK04123 488 AGA 490 (548)
T ss_pred hcc
Confidence 554
No 149
>KOG2517|consensus
Probab=87.17 E-value=1.6 Score=57.47 Aligned_cols=79 Identities=23% Similarity=0.326 Sum_probs=58.7
Q ss_pred HHHHHHHHHhHHHHHHHHHHHccCCc-cCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHHc
Q psy7639 874 EELCSDLFRSTLQPVEKALQDAKLDK-SAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 952 (2568)
Q Consensus 874 e~l~~~l~~~i~~~i~~~L~~a~~~~-~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ls 952 (2568)
+.++...++-+.--++..|+....+. ..|+.+.+.||.|+.|.+.+.+.+.+ +.++..+.++|. |+.|||+.|+..+
T Consensus 386 ~hia~A~leai~fqtr~Il~am~~~~~~~i~~L~~~GG~s~N~ll~Q~~ADi~-g~pv~~p~~~e~-~~~GaA~l~~~a~ 463 (516)
T KOG2517|consen 386 EHLARAALEAIAFQTREILEAMERDGGHPISTLRVCGGLSKNPLLMQLQADIL-GLPVVRPQDVEA-VALGAAMLAGAAS 463 (516)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeeccccccCHHHHHHHHHHh-CCccccccchhH-HHHHHHHHHHhhc
Confidence 33444444444444444444333333 46888999999999999999999999 488888888887 9999999999988
Q ss_pred CC
Q psy7639 953 GD 954 (2568)
Q Consensus 953 ~~ 954 (2568)
+.
T Consensus 464 ~~ 465 (516)
T KOG2517|consen 464 GK 465 (516)
T ss_pred CC
Confidence 75
No 150
>PRK00047 glpK glycerol kinase; Provisional
Probab=87.13 E-value=1.3 Score=60.25 Aligned_cols=78 Identities=17% Similarity=0.213 Sum_probs=54.7
Q ss_pred HHHHHHHHHhHHHHHHHHHHHcc-CCccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHHc
Q psy7639 874 EELCSDLFRSTLQPVEKALQDAK-LDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 952 (2568)
Q Consensus 874 e~l~~~l~~~i~~~i~~~L~~a~-~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ls 952 (2568)
..+++-+++.+.-.++..++... .....++.|.++||.+++|...+++.+.| +.++... +..|+.++|||+.|+.-.
T Consensus 375 ~~l~rAvlEgia~~~r~~~e~l~~~~g~~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~-~~~e~~a~GaA~~A~~~~ 452 (498)
T PRK00047 375 EHIIRATLESIAYQTRDVLDAMQADSGIRLKELRVDGGAVANNFLMQFQADIL-GVPVERP-VVAETTALGAAYLAGLAV 452 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEecCcccCHHHHHHHHHhh-CCeeEec-CcccchHHHHHHHHhhhc
Confidence 34455555555544444444332 11224789999999999999999999999 5677543 456788999999998765
Q ss_pred C
Q psy7639 953 G 953 (2568)
Q Consensus 953 ~ 953 (2568)
|
T Consensus 453 G 453 (498)
T PRK00047 453 G 453 (498)
T ss_pred C
Confidence 5
No 151
>TIGR01234 L-ribulokinase L-ribulokinase. This enzyme catalyzes the second step in arabinose catabolism. The most closely related protein subfamily outside the scope of this model includes ribitol kinase from E. coli.
Probab=87.05 E-value=1.2 Score=61.06 Aligned_cols=62 Identities=23% Similarity=0.433 Sum_probs=48.7
Q ss_pred HHHHHHcCCCCCCCCeEEEcCCc-cchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHcCCC
Q psy7639 316 EKALQDAKLDKSAIHDVVLVGGS-TRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQ 382 (2568)
Q Consensus 316 ~~~l~~a~~~~~~i~~ViLvGG~-sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls~~~ 382 (2568)
-+.|+..+. .++.|.++||+ ++++...+.+.+.| +.++....+ .|+.|+|||+.|+.-.|.+
T Consensus 426 l~~l~~~g~---~~~~i~~~GGg~a~s~~w~Qi~Adv~-g~pV~~~~~-~e~~a~GaA~lA~~~~G~~ 488 (536)
T TIGR01234 426 METFTDSGV---PVEELMAAGGIARKNPVIMQIYADVT-NRPLQIVAS-DQAPALGAAIFAAVAAGVY 488 (536)
T ss_pred HHHHHhcCC---CcceEEEeCCccccCHHHHHHHHHhh-CCeeEeccC-CcchhHHHHHHHHHHcCCc
Confidence 344444443 47899999999 99999999999999 688866554 4688999999999876643
No 152
>TIGR01312 XylB D-xylulose kinase. D-xylulose kinase (XylB) generally is found with xylose isomerase (XylA) and acts in xylose utilization.
Probab=87.01 E-value=1.4 Score=59.63 Aligned_cols=79 Identities=23% Similarity=0.406 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHccC-CccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHH
Q psy7639 873 FEELCSDLFRSTLQPVEKALQDAKL-DKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAIL 951 (2568)
Q Consensus 873 fe~l~~~l~~~i~~~i~~~L~~a~~-~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~l 951 (2568)
.+.+++-+++.+.-.++..++...- ....++.|.++||.++.+.+.+++.+.| +.++... +..++.++|||+.|+.-
T Consensus 361 ~~~l~railEgia~~~~~~~~~l~~~~~~~~~~i~~~GG~s~s~~~~Q~~Adv~-g~pv~~~-~~~e~~a~GaA~~a~~~ 438 (481)
T TIGR01312 361 RADLTRAVLEGVTFALRDSLDILREAGGIPIQSIRLIGGGAKSPAWRQMLADIF-GTPVDVP-EGEEGPALGAAILAAWA 438 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEeccccCCHHHHHHHHHHh-CCceeec-CCCcchHHHHHHHHHHh
Confidence 3344444454444444444433221 1124789999999999999999999999 5666554 46678999999999876
Q ss_pred cC
Q psy7639 952 SG 953 (2568)
Q Consensus 952 s~ 953 (2568)
.+
T Consensus 439 ~g 440 (481)
T TIGR01312 439 LG 440 (481)
T ss_pred cC
Confidence 65
No 153
>PRK04123 ribulokinase; Provisional
Probab=86.81 E-value=1.3 Score=60.98 Aligned_cols=77 Identities=18% Similarity=0.351 Sum_probs=53.8
Q ss_pred HHHHHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCC-CCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHHcC
Q psy7639 875 ELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGS-TRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSG 953 (2568)
Q Consensus 875 ~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGs-sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ls~ 953 (2568)
.+++-+++.+.-.++.+++...-....++.|.++||. ++.+.+.+++.+.| +.++... .+.|+.++|||+.|+.-.|
T Consensus 412 ~l~RAvlEgia~~~~~~~e~l~~~g~~~~~i~~~GGg~s~s~~w~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~~~G 489 (548)
T PRK04123 412 DIYRALIEATAFGTRAIMECFEDQGVPVEEVIAAGGIARKNPVLMQIYADVL-NRPIQVV-ASDQCPALGAAIFAAVAAG 489 (548)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCcccCHHHHHHHHHhc-CCceEec-CccccchHHHHHHHHHHhc
Confidence 3455555555444444443332122347889999999 99999999999999 5666443 5567889999999987554
No 154
>TIGR02628 fuculo_kin_coli L-fuculokinase. Members of this family are L-fuculokinase, from the clade that includes the L-fuculokinase of Escherichia coli. This enzyme catalyzes the second step in fucose catabolism. This family belongs to FGGY family of carbohydrate kinases (pfam02782, pfam00370). It is encoded by the kinase (K) gene of the fucose (fuc) operon.
Probab=86.75 E-value=1.3 Score=59.65 Aligned_cols=76 Identities=14% Similarity=0.227 Sum_probs=53.3
Q ss_pred HHHHHHHHHhHHHHHHHH---HHHccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHH
Q psy7639 874 EELCSDLFRSTLQPVEKA---LQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAI 950 (2568)
Q Consensus 874 e~l~~~l~~~i~~~i~~~---L~~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ 950 (2568)
..+++-+++.+.-.++.. +++.+ ...++.|.++||.+++|...+++.+.| +.++...-+ .++.++|||+.|+.
T Consensus 365 ~~l~rAvlEgia~~~r~~~e~l~~~~--~~~~~~i~~~GGga~s~~w~Qi~Adv~-g~pV~~~~~-~e~~~lGaA~~a~~ 440 (465)
T TIGR02628 365 GHIYRAALEGLTAQLKRNLQMLEQIG--QFKASELLLVGGGSKNTLWNQIRANML-DIPVKVVDD-AETTVAGAAMFGFY 440 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc--CCCcceEEEecCccCCHHHHHHhhhhc-CCeeEeccC-CcchHHHHHHHHHH
Confidence 334445555544444443 33332 124788999999999999999999999 577755444 57889999999987
Q ss_pred HcC
Q psy7639 951 LSG 953 (2568)
Q Consensus 951 ls~ 953 (2568)
-.|
T Consensus 441 a~G 443 (465)
T TIGR02628 441 GVG 443 (465)
T ss_pred hcC
Confidence 655
No 155
>PRK10331 L-fuculokinase; Provisional
Probab=86.61 E-value=1.2 Score=59.92 Aligned_cols=82 Identities=18% Similarity=0.280 Sum_probs=56.0
Q ss_pred cHHHHHHHHhhhhhhhHHHHHHHHHHcC-CCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHH
Q psy7639 296 SRARFEELCSDLFRSTLQPVEKALQDAK-LDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQ 374 (2568)
Q Consensus 296 tR~efe~l~~~l~~~i~~~i~~~l~~a~-~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~ 374 (2568)
+|.++ ++-+++.+.-.++..++... .....++.|.++||++++|...+.+.+.| +.++... +..+++++|||+.
T Consensus 359 ~~~~l---~rAvlEgia~~~~~~~~~l~~~~~~~~~~i~~~GGga~s~~w~Qi~Advl-g~pV~~~-~~~e~~a~GaA~l 433 (470)
T PRK10331 359 TRGHF---YRAALEGLTAQLKRNLQVLEKIGHFKASELLLVGGGSRNALWNQIKANML-DIPIKVL-DDAETTVAGAAMF 433 (470)
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEcccccCHHHHHHHHHhc-CCeeEec-CcccchHHHHHHH
Confidence 45553 44444444443333333221 11224789999999999999999999999 6787654 4557889999999
Q ss_pred HHHHcCCC
Q psy7639 375 AAILSGDQ 382 (2568)
Q Consensus 375 aa~ls~~~ 382 (2568)
|+.-.|.+
T Consensus 434 a~~~~G~~ 441 (470)
T PRK10331 434 GWYGVGEF 441 (470)
T ss_pred HHHhcCCC
Confidence 98766643
No 156
>TIGR01234 L-ribulokinase L-ribulokinase. This enzyme catalyzes the second step in arabinose catabolism. The most closely related protein subfamily outside the scope of this model includes ribitol kinase from E. coli.
Probab=86.48 E-value=1.5 Score=60.08 Aligned_cols=76 Identities=21% Similarity=0.344 Sum_probs=52.3
Q ss_pred HHHHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCC-CCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHHcC
Q psy7639 876 LCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGS-TRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSG 953 (2568)
Q Consensus 876 l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGs-sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ls~ 953 (2568)
+++-+++.+.-.++..++...-....++.|+++||. ++.+.+.+++.+.| +.++....+ .|+.|+|||+.|+.-.|
T Consensus 410 ~~RAvlEgia~~~~~~l~~l~~~g~~~~~i~~~GGg~a~s~~w~Qi~Adv~-g~pV~~~~~-~e~~a~GaA~lA~~~~G 486 (536)
T TIGR01234 410 LYRALIEATAFGTRMIMETFTDSGVPVEELMAAGGIARKNPVIMQIYADVT-NRPLQIVAS-DQAPALGAAIFAAVAAG 486 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEeCCccccCHHHHHHHHHhh-CCeeEeccC-CcchhHHHHHHHHHHcC
Confidence 344444444333333333222112248899999999 99999999999999 577765544 46889999999987665
No 157
>PTZ00294 glycerol kinase-like protein; Provisional
Probab=86.38 E-value=1.5 Score=59.57 Aligned_cols=77 Identities=16% Similarity=0.275 Sum_probs=53.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHccC-CccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHHcC
Q psy7639 875 ELCSDLFRSTLQPVEKALQDAKL-DKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSG 953 (2568)
Q Consensus 875 ~l~~~l~~~i~~~i~~~L~~a~~-~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ls~ 953 (2568)
.++.-+++.+.-.++..++...- ....++.|.++||.++++...+++.+.| +.++... ...|+.++|||+.|+.-.|
T Consensus 379 ~i~rAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GG~a~s~~w~Qi~Adv~-g~pV~~~-~~~e~~alGaAl~aa~a~G 456 (504)
T PTZ00294 379 HIVRAALEAIALQTNDVIESMEKDAGIELNSLRVDGGLTKNKLLMQFQADIL-GKDIVVP-EMAETTALGAALLAGLAVG 456 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCcceEEEecccccCHHHHHHHHHHh-CCceEec-CcccchHHHHHHHHHhhcC
Confidence 34444555554444444443221 1123789999999999999999999999 5666544 4556889999999987655
No 158
>PRK10331 L-fuculokinase; Provisional
Probab=86.26 E-value=1.5 Score=59.24 Aligned_cols=76 Identities=17% Similarity=0.226 Sum_probs=53.5
Q ss_pred HHHHHHHhHHHHHHHHHHHccC-CccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHHcC
Q psy7639 876 LCSDLFRSTLQPVEKALQDAKL-DKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSG 953 (2568)
Q Consensus 876 l~~~l~~~i~~~i~~~L~~a~~-~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ls~ 953 (2568)
+++-+++.+.-.++..++...- ....++.|.++||.++.|...+++.+.| +.++... ...|+.++|||+.|+.-.|
T Consensus 363 l~rAvlEgia~~~~~~~~~l~~~~~~~~~~i~~~GGga~s~~w~Qi~Advl-g~pV~~~-~~~e~~a~GaA~la~~~~G 439 (470)
T PRK10331 363 FYRAALEGLTAQLKRNLQVLEKIGHFKASELLLVGGGSRNALWNQIKANML-DIPIKVL-DDAETTVAGAAMFGWYGVG 439 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEcccccCHHHHHHHHHhc-CCeeEec-CcccchHHHHHHHHHHhcC
Confidence 4445555554444444443321 1234889999999999999999999999 5666544 4557889999999987554
No 159
>PLN02295 glycerol kinase
Probab=85.98 E-value=1.3 Score=60.42 Aligned_cols=77 Identities=18% Similarity=0.207 Sum_probs=54.3
Q ss_pred HHhhhhhhhHHHHHHHHHH---c-CC--CCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHH
Q psy7639 303 LCSDLFRSTLQPVEKALQD---A-KL--DKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAA 376 (2568)
Q Consensus 303 l~~~l~~~i~~~i~~~l~~---a-~~--~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa 376 (2568)
+++-+++.+.-.++..++. . +. ....++.|.++||++++|...+.+.+.| +.++.. .+..|+.|+|||+.|+
T Consensus 381 l~RAvlEgia~~~r~~l~~l~~~~~~~~~~~~~~~i~~~GGga~s~~w~Qi~ADv~-g~pV~~-~~~~e~~alGaA~~A~ 458 (512)
T PLN02295 381 IARAVLESMCFQVKDVLDAMRKDAGEEKSHKGLFLLRVDGGATANNLLMQIQADLL-GSPVVR-PADIETTALGAAYAAG 458 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceEEEeccchhCHHHHHHHHHhc-CCceEe-cCccccHHHHHHHHHH
Confidence 4444455554444444442 2 21 2234788999999999999999999999 777754 4556889999999998
Q ss_pred HHcCC
Q psy7639 377 ILSGD 381 (2568)
Q Consensus 377 ~ls~~ 381 (2568)
.-.|.
T Consensus 459 ~~~G~ 463 (512)
T PLN02295 459 LAVGL 463 (512)
T ss_pred hhcCc
Confidence 77664
No 160
>TIGR02627 rhamnulo_kin rhamnulokinase. This model describes rhamnulokinase, an enzyme that catalyzes the second step in rhamnose catabolism.
Probab=85.69 E-value=1.6 Score=58.71 Aligned_cols=52 Identities=19% Similarity=0.215 Sum_probs=44.1
Q ss_pred CCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHcCCC
Q psy7639 328 AIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQ 382 (2568)
Q Consensus 328 ~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls~~~ 382 (2568)
.++.|.++||++++++..+.+.+.+ +.++.. . +.|+.|+|||+.|+.-.|.+
T Consensus 387 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~-~-~~e~~a~GaA~~a~~~~G~~ 438 (454)
T TIGR02627 387 PISQLHIVGGGSQNAFLNQLCADAC-GIRVIA-G-PVEASTLGNIGVQLMALDEI 438 (454)
T ss_pred CcCEEEEECChhhhHHHHHHHHHHh-CCceEc-C-CchHHHHHHHHHHHHhcCCc
Confidence 4789999999999999999999999 677753 2 36799999999999876654
No 161
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type. Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway.
Probab=85.47 E-value=1.5 Score=59.74 Aligned_cols=52 Identities=13% Similarity=0.219 Sum_probs=44.3
Q ss_pred CCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHcCC
Q psy7639 328 AIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGD 381 (2568)
Q Consensus 328 ~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls~~ 381 (2568)
.++.|.++||+++++...+.+.+.| +.++...- ..++.++|||+.|+.-.|.
T Consensus 401 ~~~~i~~~GGga~s~~w~Qi~Adv~-g~pv~~~~-~~e~~a~GaA~la~~~~G~ 452 (505)
T TIGR01314 401 PLNMIQATGGFASSEVWRQMMSDIF-EQEIVVPE-SYESSCLGACILGLKALGL 452 (505)
T ss_pred CCcEEEEecCcccCHHHHHHHHHHc-CCeeEecC-CCCcchHHHHHHHHHhcCc
Confidence 4889999999999999999999999 67886544 4468899999999876654
No 162
>PRK09604 UGMP family protein; Validated
Probab=85.42 E-value=19 Score=46.15 Aligned_cols=219 Identities=14% Similarity=0.165 Sum_probs=110.7
Q ss_pred CCcccEEEEc-cCCCCHHHHHHHHHHHHHc-CCceeEEechhhHHHhhcccc--cCcCCcceEEEEeeCCeeeEEEEEEE
Q psy7639 2076 HSVRDAVITV-PAYFNDAQRQATKDAGAIA-GLNVMRIVNEPTAAALAYGLD--KNLKGERNVLIFDLGGGTFDVSILSI 2151 (2568)
Q Consensus 2076 ~~v~~aVItV-Pa~f~~~qR~a~~~Aa~~A-Gl~vl~linEptAaalaYg~~--~~~~~~~~vlv~DlGggt~dvsil~~ 2151 (2568)
.+++.+++|+ |..|+- -|-++--|-.+| .+++ .++-=++-.|.+|... ...+.+--+|++|= |++. ++..-
T Consensus 71 ~did~iavt~GPG~~tg-lrvg~~~Ak~La~~~~i-pl~~v~h~~~ha~~a~~~s~~~~~~lvl~vsG--G~s~-~~~~~ 145 (332)
T PRK09604 71 EDIDAIAVTAGPGLVGA-LLVGVSFAKALALALNK-PLIGVNHLEGHLLAPFLEEEPEFPFLALLVSG--GHTQ-LVLVK 145 (332)
T ss_pred HHCCEEEEecCCCcHHh-HHHHHHHHHHHHHHhCC-CEEeecCHHHHHHhhhhccCCCCCEEEEEecC--CccE-EEEEc
Confidence 3577888888 888877 555555555555 2332 3333344333333211 11111234566663 4433 23333
Q ss_pred cCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcceeEEEEeccc--C
Q psy7639 2152 DEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALY--D 2229 (2568)
Q Consensus 2152 ~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~~~i~~~~--~ 2229 (2568)
+.+ .+++++..-|..+| .+.+.+-+.-|......+ ++..-|...+.. .+.++..+ +
T Consensus 146 ~~~-~~~~l~~t~d~slG----------~~yd~~t~~LG~~~~~g~----kvmgLA~~g~~~-------~~~~~~~~~~~ 203 (332)
T PRK09604 146 GIG-DYELLGETLDDAAG----------EAFDKVAKLLGLGYPGGP----AIDKLAKQGDPD-------AFKFPRPMDRP 203 (332)
T ss_pred CCC-cEEEccccCCchhh----------HHHHHHHHHcCCCCCCcH----HHHHHHHhCCCC-------eEeCCccccCC
Confidence 445 89999887788777 445555555565433333 233333322210 01111111 2
Q ss_pred CcceEEe-----eCH------HHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCC-
Q psy7639 2230 GIDFYTK-----ISR------ARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGK- 2297 (2568)
Q Consensus 2230 ~~d~~~~-----itr------~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~- 2297 (2568)
+.+|++. +.| ....+++..+...+.+.+-+.++.+. ...+++.|+|.||...=..+++.|.+.+...
T Consensus 204 ~~~~sfsg~~~~~~~~~~~~~~~~~~iA~s~q~~l~~~l~~~~~~~~-~~~~~~~lvlsGGVa~N~~L~~~l~~~~~~~g 282 (332)
T PRK09604 204 GLDFSFSGLKTAVLNTIEKSEQTKADIAASFQAAVVDVLVIKTKRAL-KQTGVKTLVVAGGVAANSGLRERLAELAKKRG 282 (332)
T ss_pred CccEecCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCeEEEcChHHHHHHHHHHHHHHHHHCC
Confidence 3333331 000 11234444333333333333322221 1246788999999999999999998887321
Q ss_pred -CC---CCCCCcchhHHhhHHHHHHHhhC
Q psy7639 2298 -SL---NLSINPDEAVAYGAAVQAAILSG 2322 (2568)
Q Consensus 2298 -~~---~~~~npdeava~GAa~~aa~ls~ 2322 (2568)
.+ .....-|.++++|+|=.--...|
T Consensus 283 ~~v~~~~~~p~~D~gisIg~ag~~~~~~g 311 (332)
T PRK09604 283 IEVFIPPLKLCTDNAAMIAAAGYERLKAG 311 (332)
T ss_pred CEEECCCCCCCcHHHHHHHHHHHHHHHcC
Confidence 21 12235689999999854444444
No 163
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3.6.1.11 from EC and guanosine pentaphosphate phosphatase (GppA) 3.6.1.40 from EC belong to the sugar kinase/actin/hsp70 superfamily [].; PDB: 3MDQ_A 1U6Z_A 1T6D_B 2J4R_B 1T6C_A 2FLO_B 3CER_B 3HI0_A.
Probab=85.17 E-value=3.7 Score=51.53 Aligned_cols=112 Identities=21% Similarity=0.289 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCceEEEEechhHHHHHhhccccccCcceEEEEE
Q psy7639 1486 SSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFD 1565 (2568)
Q Consensus 1486 ~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D 1565 (2568)
+..+|+.+++.+.. ++.+...+|-|=-..=-..+..++.+.-+..|+++..|=-|=+|...+.+...........+|+|
T Consensus 40 ~~~~L~~f~~~~~~-~~v~~i~~vATsA~R~A~N~~~~~~~i~~~tGi~i~iIsgeeEa~l~~~gv~~~l~~~~~~lviD 118 (285)
T PF02541_consen 40 AIDALKRFKEILKD-YGVEKIRAVATSALREAKNSDEFLDRIKKETGIDIEIISGEEEARLSFLGVLSSLPPDKNGLVID 118 (285)
T ss_dssp HHHHHHHHHHHHHH-TTGSEEEEEEEHHHHHSTTHHHHHHHHHHHHSS-EEEE-HHHHHHHHHHHHHHHSTTTSSEEEEE
T ss_pred HHHHHHHHHHHHHH-CCCCEEEEEhhHHHHhCcCHHHHHHHHHHHhCCceEEecHHHHHHHHHHHHHhhccccCCEEEEE
Confidence 34455555555533 33322333333222222334455666677789999654444445433333322222456789999
Q ss_pred eCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHH
Q psy7639 1566 LGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRL 1604 (2568)
Q Consensus 1566 ~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l 1604 (2568)
+|||++.+++++ ++. +..... -.+|...+.+.+
T Consensus 119 IGGGStEl~~~~--~~~---~~~~~S-l~lG~vrl~e~~ 151 (285)
T PF02541_consen 119 IGGGSTELILFE--NGK---VVFSQS-LPLGAVRLTERF 151 (285)
T ss_dssp EESSEEEEEEEE--TTE---EEEEEE-ES--HHHHHHHH
T ss_pred ECCCceEEEEEE--CCe---eeEeee-eehHHHHHHHHH
Confidence 999999999998 563 333222 237776665554
No 164
>PLN02295 glycerol kinase
Probab=85.04 E-value=1.8 Score=59.01 Aligned_cols=78 Identities=18% Similarity=0.238 Sum_probs=54.9
Q ss_pred HHHHHHHHHhHHHHHHHHHHHcc----C--CccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHH
Q psy7639 874 EELCSDLFRSTLQPVEKALQDAK----L--DKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQ 947 (2568)
Q Consensus 874 e~l~~~l~~~i~~~i~~~L~~a~----~--~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~ 947 (2568)
..+++-+++.+.-.++.+++... . ....++.|.++||++++|...+++.+.| +.++.. .+..|+.|+|||+.
T Consensus 379 ~~l~RAvlEgia~~~r~~l~~l~~~~~~~~~~~~~~~i~~~GGga~s~~w~Qi~ADv~-g~pV~~-~~~~e~~alGaA~~ 456 (512)
T PLN02295 379 AHIARAVLESMCFQVKDVLDAMRKDAGEEKSHKGLFLLRVDGGATANNLLMQIQADLL-GSPVVR-PADIETTALGAAYA 456 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceEEEeccchhCHHHHHHHHHhc-CCceEe-cCccccHHHHHHHH
Confidence 34455555555544444444332 1 1234788999999999999999999999 566754 35567889999999
Q ss_pred HHHHcC
Q psy7639 948 AAILSG 953 (2568)
Q Consensus 948 aa~ls~ 953 (2568)
|+.-.|
T Consensus 457 A~~~~G 462 (512)
T PLN02295 457 AGLAVG 462 (512)
T ss_pred HHhhcC
Confidence 987665
No 165
>TIGR02627 rhamnulo_kin rhamnulokinase. This model describes rhamnulokinase, an enzyme that catalyzes the second step in rhamnose catabolism.
Probab=84.87 E-value=1.8 Score=58.18 Aligned_cols=50 Identities=20% Similarity=0.250 Sum_probs=42.3
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHHcC
Q psy7639 901 AIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSG 953 (2568)
Q Consensus 901 ~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ls~ 953 (2568)
.++.|.++||+++.+...+++.+.+ +.++... +.|+.++|||+.|+.-.|
T Consensus 387 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~--~~e~~a~GaA~~a~~~~G 436 (454)
T TIGR02627 387 PISQLHIVGGGSQNAFLNQLCADAC-GIRVIAG--PVEASTLGNIGVQLMALD 436 (454)
T ss_pred CcCEEEEECChhhhHHHHHHHHHHh-CCceEcC--CchHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999 5666432 367999999999987655
No 166
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type. Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway.
Probab=84.36 E-value=2.1 Score=58.34 Aligned_cols=78 Identities=10% Similarity=0.138 Sum_probs=53.2
Q ss_pred HHHHHHHHHhHHHHHHHHHHHccC-CccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHHc
Q psy7639 874 EELCSDLFRSTLQPVEKALQDAKL-DKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 952 (2568)
Q Consensus 874 e~l~~~l~~~i~~~i~~~L~~a~~-~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ls 952 (2568)
+.++.-+++.+.-.+...+....- ....++.|.++||.++.+...+++.+.| +.++...- ..++.++|||+.|+.-.
T Consensus 373 ~~l~rAvlEgia~~~~~~~~~~~~~~g~~~~~i~~~GGga~s~~w~Qi~Adv~-g~pv~~~~-~~e~~a~GaA~la~~~~ 450 (505)
T TIGR01314 373 EHMIRAALEGVIYNLYTVALALVEVMGDPLNMIQATGGFASSEVWRQMMSDIF-EQEIVVPE-SYESSCLGACILGLKAL 450 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCcccCHHHHHHHHHHc-CCeeEecC-CCCcchHHHHHHHHHhc
Confidence 344555555554444433322210 1124889999999999999999999999 56775544 44688999999998755
Q ss_pred C
Q psy7639 953 G 953 (2568)
Q Consensus 953 ~ 953 (2568)
|
T Consensus 451 G 451 (505)
T TIGR01314 451 G 451 (505)
T ss_pred C
Confidence 4
No 167
>KOG2531|consensus
Probab=84.33 E-value=2.5 Score=53.52 Aligned_cols=57 Identities=19% Similarity=0.380 Sum_probs=48.0
Q ss_pred HHHccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHH
Q psy7639 892 LQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAI 950 (2568)
Q Consensus 892 L~~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ 950 (2568)
.+..+........|+.|||.||...|-+.|.+.| +.++.. ++..++.+.|+|+.|+.
T Consensus 433 ~~~lg~~~~~~~rilvtGGAS~N~~Ilq~iadVf-~apVy~-~~~~~sa~lG~A~ra~y 489 (545)
T KOG2531|consen 433 AEPLGFKSNPPTRILVTGGASRNEAILQIIADVF-GAPVYT-IEGPNSAALGGAYRAAY 489 (545)
T ss_pred hccccCCCCCCceEEEecCccccHHHHHHHHHHh-CCCeEe-ecCCchhhHHHHHHHHH
Confidence 3455666667899999999999999999999999 566654 48889999999999864
No 168
>KOG0677|consensus
Probab=84.25 E-value=3.8 Score=47.93 Aligned_cols=222 Identities=21% Similarity=0.272 Sum_probs=127.6
Q ss_pred CCeEEEEEcCCCCHHHHHHHHHHH-HHcCCCeeeecchhHHHHHHhccccCCCCCceEEEEEeCCceeEEEEEEEcCCcE
Q psy7639 709 VRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEGAL 787 (2568)
Q Consensus 709 ~~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~l~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~~~~ 787 (2568)
-..+.+|=|.-=....|+.|.+.. +.-||.-+.+.-...-+.++-++. +=+|+|-|.|-+-+.-+- ++
T Consensus 101 ~~KiLLTePPmNP~kNREKm~evMFEkY~F~gvyvaiQAVLtLYAQGL~-------tGvVvDSGDGVTHi~PVy--e~-- 169 (389)
T KOG0677|consen 101 NCKILLTEPPMNPTKNREKMIEVMFEKYGFGGVYVAIQAVLTLYAQGLL-------TGVVVDSGDGVTHIVPVY--EG-- 169 (389)
T ss_pred cCeEEeeCCCCCccccHHHHHHHHHHHcCCCeEEehHHHHHHHHHhccc-------ceEEEecCCCeeEEeeee--cc--
Confidence 346789999998888899887764 778998777655444444333332 348999999988765432 33
Q ss_pred EEEEeeccCCCCccchHHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHHHHhcCC-----------CCcceeeec
Q psy7639 788 FEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSS-----------STEASIEID 856 (2568)
Q Consensus 788 ~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~LS~-----------~~~~~i~i~ 856 (2568)
+..-.-.+-..+.|+|+.+-|++.+..+ .|...-+.+-. .....|+.|.. .-++++-++
T Consensus 170 ~~l~HLtrRldvAGRdiTryLi~LLl~r---GYafN~tADFE-------TVR~iKEKLCYisYd~e~e~kLalETTvLv~ 239 (389)
T KOG0677|consen 170 FVLPHLTRRLDVAGRDITRYLIKLLLRR---GYAFNHTADFE-------TVREIKEKLCYISYDLELEQKLALETTVLVE 239 (389)
T ss_pred eehhhhhhhccccchhHHHHHHHHHHhh---ccccccccchH-------HHHHHHhhheeEeechhhhhHhhhhheeeee
Confidence 2222223345678999999888877643 11111111111 12233333321 011222222
Q ss_pred --cccCCcceEEecchHhHH---HHHHHHHH-----hHHHHHHHHHHHccCCcc--CcCeEEEEcCCCCcHHHHHHHHHH
Q psy7639 857 --ALYDGIDFYTKISRARFE---ELCSDLFR-----STLQPVEKALQDAKLDKS--AIHDVVLVGGSTRIPKVQSLLQNF 924 (2568)
Q Consensus 857 --~l~~~~d~~~~itr~efe---~l~~~l~~-----~i~~~i~~~L~~a~~~~~--~I~~ViLvGGssriP~v~~~l~~~ 924 (2568)
.+.+|.- +.+--+.|| .+++|.+- .+.+++-.+++.+.++.. --.+|+|.||++.-|.+-.+|++.
T Consensus 240 ~YtLPDGRv--IkvG~ERFeAPE~LFqP~Li~VE~~G~aellF~~iQaaDiD~R~~lYkhIVLSGGstMYPGLPSRLEkE 317 (389)
T KOG0677|consen 240 SYTLPDGRV--IKVGGERFEAPEALFQPHLINVEGPGVAELLFNTIQAADIDIRSELYKHIVLSGGSTMYPGLPSRLEKE 317 (389)
T ss_pred eeecCCCcE--EEecceeccCchhhcCcceeccCCCcHHHHHHHHHHHhccchHHHHHhHeeecCCcccCCCCcHHHHHH
Confidence 2344433 344455554 56666442 344566667776655422 256899999999999988888765
Q ss_pred hCCc----------------c--ccccCCchhHHHhhHHHHHHHHcC
Q psy7639 925 FCGK----------------S--LNLSINPDEAVAYGAAVQAAILSG 953 (2568)
Q Consensus 925 f~~~----------------~--v~~~~npdeaVA~GAAl~aa~ls~ 953 (2568)
+... + +..+..-...|=.|.|.+|.+...
T Consensus 318 lkqlyl~rVL~~d~~~l~KfkiRIEdPPrRKhMVflGGAVLA~imkD 364 (389)
T KOG0677|consen 318 LKQLYLDRVLKGDTDKLKKFKIRIEDPPRRKHMVFLGGAVLAGIMKD 364 (389)
T ss_pred HHHHHHHHHHcCChhhhhheEEeccCCCccceeEEEchHHHHHHhcC
Confidence 4210 1 122222346677888888887654
No 169
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type. This model describes a eukaryotic form of pantothenate kinase, characterized from the fungus Aspergillus nidulans and with similar forms known in several other eukaryotes. It also includes forms from several Gram-positive bacteria suggested to have originated from the eukaryotic form by lateral transfer. It differs in a number of biochemical properties (such as inhibition by acetyl-CoA) from most bacterial CoaA and lacks sequence similarity. This enzyme is the key regulatory step in the biosynthesis of coenzyme A (CoA).
Probab=84.16 E-value=14 Score=45.78 Aligned_cols=47 Identities=17% Similarity=0.125 Sum_probs=39.4
Q ss_pred CCCCeEEEcCC-ccchHHHHHHHHHHh--CCCcccccCCchhHHHhhHHH
Q psy7639 327 SAIHDVVLVGG-STRIPKVQSLLQNFF--CGKSLNLSINPDEAVAYGAAV 373 (2568)
Q Consensus 327 ~~i~~ViLvGG-~sriP~v~~~l~~~f--~~~~v~~~~npdeaVA~GAa~ 373 (2568)
..+..|+++|| .+..|.+++.+...+ -+.++..+-|+...+|.||++
T Consensus 229 ~~~~~IvF~Gg~L~~~~~l~~~~~~~~~~~~~~~ifp~h~~y~gAlGAaL 278 (279)
T TIGR00555 229 YNIDRIVFIGSFLRNNQLLMKVLSYATNFWSKKALFLEHEGYSGAIGALL 278 (279)
T ss_pred cCCCeEEEECCcccCCHHHHHHHHHHHhhcCceEEEECCcchHHHhhhcc
Confidence 45889999999 777999999998876 235667788999999999986
No 170
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase). This alignment models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution.
Probab=84.11 E-value=37 Score=43.32 Aligned_cols=113 Identities=25% Similarity=0.302 Sum_probs=65.9
Q ss_pred EEecCCCceEEEEEcCceeeeChhhhHHHHHHHHHHHHHHHh--CCCcccEEEEccCCCCHHH------------HHHHH
Q psy7639 2033 VVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYL--GHSVRDAVITVPAYFNDAQ------------RQATK 2098 (2568)
Q Consensus 2033 ~~~~~~~~~~~v~~~~~~~~~~peei~a~iL~~lk~~ae~~~--g~~v~~aVItVPa~f~~~q------------R~a~~ 2098 (2568)
+++.+|++........ ..+|+++...+...+++..++.- ..++..+.|++|..++... .-.++
T Consensus 14 l~d~~g~i~~~~~~~~---~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~gIgva~pG~vd~~~g~~~~~~~~~w~~~~l~ 90 (318)
T TIGR00744 14 VVDEEGNILSKWKVPT---DTTPETIVDAIASAVDSFIQHIAKVGHEIVAIGIGAPGPVNRQRGTVYFAVNLDWKQEPLK 90 (318)
T ss_pred EECCCCCEEEEEEeCC---CCCHHHHHHHHHHHHHHHHHhcCCCccceEEEEEeccccccCCCCEEEecCCCCCCCCCHH
Confidence 3455565543333221 13566666666665655544331 2357788999998775321 11122
Q ss_pred HH-HHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCeeeEEEEEE
Q psy7639 2099 DA-GAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILS 2150 (2568)
Q Consensus 2099 ~A-a~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt~dvsil~ 2150 (2568)
+. .+.-|+.| .+.|+-.|+|++..........++++++.+|.|- -.+++.
T Consensus 91 ~~l~~~~~~pv-~v~NDa~~~alaE~~~g~~~~~~~~~~v~igtGi-G~giv~ 141 (318)
T TIGR00744 91 EKVEARVGLPV-VVENDANAAALGEYKKGAGKGARDVICITLGTGL-GGGIII 141 (318)
T ss_pred HHHHHHHCCCE-EEechHHHHHHHHHHhcccCCCCcEEEEEeCCcc-EEEEEE
Confidence 22 23448876 5999999999976443222245789999999874 555553
No 171
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional
Probab=83.91 E-value=1.8 Score=59.22 Aligned_cols=52 Identities=23% Similarity=0.358 Sum_probs=44.0
Q ss_pred CCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHcCC
Q psy7639 328 AIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGD 381 (2568)
Q Consensus 328 ~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls~~ 381 (2568)
.++.|.++||+++++...+.+.+.+ +.++.... ..++.++|||+.|+.-.|.
T Consensus 409 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~~-~~e~~alGaA~lA~~~~G~ 460 (520)
T PRK10939 409 FPSSLVFAGGGSKGKLWSQILADVT-GLPVKVPV-VKEATALGCAIAAGVGAGI 460 (520)
T ss_pred CCcEEEEeCCcccCHHHHHHHHHhc-CCeeEEec-ccCchHHHHHHHHHHHhCC
Confidence 4789999999999999999999999 78886654 4467899999999876654
No 172
>PRK10640 rhaB rhamnulokinase; Provisional
Probab=83.25 E-value=2.3 Score=57.23 Aligned_cols=52 Identities=17% Similarity=0.220 Sum_probs=43.7
Q ss_pred CCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHHHcCCC
Q psy7639 328 AIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQ 382 (2568)
Q Consensus 328 ~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ls~~~ 382 (2568)
.++.|.++||++|++...+.+.+.+ +.++... +.++.++|||+.|+.-.|.+
T Consensus 375 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~--~~ea~alGaa~~a~~a~G~~ 426 (471)
T PRK10640 375 PFSQLHIVGGGCQNALLNQLCADAC-GIRVIAG--PVEASTLGNIGIQLMTLDEL 426 (471)
T ss_pred CcceEEEECChhhhHHHHHHHHHHh-CCCeeeC--ChhHHHHHHHHHHHHHcCCc
Confidence 4788999999999999999999999 6777543 24799999999998776653
No 173
>PRK10854 exopolyphosphatase; Provisional
Probab=83.16 E-value=5.5 Score=54.15 Aligned_cols=113 Identities=17% Similarity=0.145 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCceEEEEechhHHHHHhhccccccCcceEEEE
Q psy7639 1485 ISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIF 1564 (2568)
Q Consensus 1485 v~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~v~~li~EPtAAal~y~~~~~~~~~~~vlV~ 1564 (2568)
-.-..|+.+++.+..| +.....+|-|=---=-.....++.++-...|+++..|=-|=+|...+.+........++.+|+
T Consensus 64 r~~~~L~~F~~~~~~~-~v~~v~~vATsAlReA~N~~~fl~~i~~~tGl~i~vIsG~EEA~l~~~gv~~~l~~~~~~lvv 142 (513)
T PRK10854 64 RGLNCLSLFAERLQGF-SPANVCIVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVI 142 (513)
T ss_pred HHHHHHHHHHHHHHhC-CCCeEEEEehHHHHcCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHhhhhcccCCCCCeEEE
Confidence 3445566666666443 433333444333222334566777788888999954444444544444443332223568999
Q ss_pred EeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHH
Q psy7639 1565 DLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRL 1604 (2568)
Q Consensus 1565 D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l 1604 (2568)
|+|||++.+++++ ++......+. .+|...+.+.+
T Consensus 143 DIGGGStEl~~~~--~~~~~~~~S~----~lG~vrl~e~f 176 (513)
T PRK10854 143 DIGGGSTELVIGE--NFEPILVESR----RMGCVSFAQLY 176 (513)
T ss_pred EeCCCeEEEEEec--CCCeeEeEEE----ecceeeHHhhh
Confidence 9999999999997 5533333222 46766655543
No 174
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional
Probab=82.85 E-value=2.7 Score=57.56 Aligned_cols=51 Identities=24% Similarity=0.389 Sum_probs=42.9
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHHcC
Q psy7639 901 AIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSG 953 (2568)
Q Consensus 901 ~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ls~ 953 (2568)
.++.|.++||.++++...+++.+.| +.++.... ..++.++|||+.|+.-.|
T Consensus 409 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~~-~~e~~alGaA~lA~~~~G 459 (520)
T PRK10939 409 FPSSLVFAGGGSKGKLWSQILADVT-GLPVKVPV-VKEATALGCAIAAGVGAG 459 (520)
T ss_pred CCcEEEEeCCcccCHHHHHHHHHhc-CCeeEEec-ccCchHHHHHHHHHHHhC
Confidence 4789999999999999999999999 67776554 446789999999987655
No 175
>PRK09557 fructokinase; Reviewed
Probab=82.68 E-value=44 Score=42.32 Aligned_cols=92 Identities=15% Similarity=0.208 Sum_probs=49.0
Q ss_pred ChhhhHHHHHHHHHHHHHHHhCCCcccEEEEccCCCCHH------------HHHHHHH-HHHHcCCceeEEechhhHHHh
Q psy7639 2054 APEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDA------------QRQATKD-AGAIAGLNVMRIVNEPTAAAL 2120 (2568)
Q Consensus 2054 ~peei~a~iL~~lk~~ae~~~g~~v~~aVItVPa~f~~~------------qR~a~~~-Aa~~AGl~vl~linEptAaal 2120 (2568)
+|+++...+...+++.... . ..+..+.|++|...+.. ..-.+++ -.+.-|+.| .+.|+-.|||+
T Consensus 35 ~~~~~~~~i~~~i~~~~~~-~-~~~~gIgi~~pG~vd~~~g~i~~~~~~~~~~~~l~~~l~~~~~~pv-~~~NDa~aaA~ 111 (301)
T PRK09557 35 DYQQTIEAIATLVDMAEQA-T-GQRGTVGVGIPGSISPYTGLVKNANSTWLNGQPLDKDLSARLNREV-RLANDANCLAV 111 (301)
T ss_pred CHHHHHHHHHHHHHHHHhh-c-CCceEEEecCcccCcCCCCeEEecCCccccCCCHHHHHHHHHCCCE-EEccchhHHHH
Confidence 4555555554444433221 1 23445777777655321 1111222 122338875 69999999999
Q ss_pred hcccccCcCCcceEEEEeeCCeeeEEEEE
Q psy7639 2121 AYGLDKNLKGERNVLIFDLGGGTFDVSIL 2149 (2568)
Q Consensus 2121 aYg~~~~~~~~~~vlv~DlGggt~dvsil 2149 (2568)
+--........++++++.+|.| .-..++
T Consensus 112 aE~~~g~~~~~~~~~~l~igtG-iG~giv 139 (301)
T PRK09557 112 SEAVDGAAAGKQTVFAVIIGTG-CGAGVA 139 (301)
T ss_pred HHHHhcccCCCCcEEEEEEccc-eEEEEE
Confidence 8644322224567888888754 344444
No 176
>PRK10640 rhaB rhamnulokinase; Provisional
Probab=82.57 E-value=2.5 Score=56.90 Aligned_cols=50 Identities=16% Similarity=0.165 Sum_probs=42.0
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHHcC
Q psy7639 901 AIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSG 953 (2568)
Q Consensus 901 ~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ls~ 953 (2568)
.++.|.++||+++.+...+++.+.+ +.++... . .++.++|||+.|+.-.|
T Consensus 375 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~-~-~ea~alGaa~~a~~a~G 424 (471)
T PRK10640 375 PFSQLHIVGGGCQNALLNQLCADAC-GIRVIAG-P-VEASTLGNIGIQLMTLD 424 (471)
T ss_pred CcceEEEECChhhhHHHHHHHHHHh-CCCeeeC-C-hhHHHHHHHHHHHHHcC
Confidence 4788999999999999999999999 5666443 2 47999999999987655
No 177
>KOG2531|consensus
Probab=82.44 E-value=2.9 Score=53.08 Aligned_cols=55 Identities=20% Similarity=0.391 Sum_probs=46.6
Q ss_pred HcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHHH
Q psy7639 321 DAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAI 377 (2568)
Q Consensus 321 ~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa~ 377 (2568)
..+........|++|||.||-..|-+.|.+.| +.++.. ++..+++|.|+|++|+.
T Consensus 435 ~lg~~~~~~~rilvtGGAS~N~~Ilq~iadVf-~apVy~-~~~~~sa~lG~A~ra~y 489 (545)
T KOG2531|consen 435 PLGFKSNPPTRILVTGGASRNEAILQIIADVF-GAPVYT-IEGPNSAALGGAYRAAY 489 (545)
T ss_pred cccCCCCCCceEEEecCccccHHHHHHHHHHh-CCCeEe-ecCCchhhHHHHHHHHH
Confidence 44555567889999999999999999999999 677754 48899999999999863
No 178
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type. This model describes a eukaryotic form of pantothenate kinase, characterized from the fungus Aspergillus nidulans and with similar forms known in several other eukaryotes. It also includes forms from several Gram-positive bacteria suggested to have originated from the eukaryotic form by lateral transfer. It differs in a number of biochemical properties (such as inhibition by acetyl-CoA) from most bacterial CoaA and lacks sequence similarity. This enzyme is the key regulatory step in the biosynthesis of coenzyme A (CoA).
Probab=81.72 E-value=20 Score=44.48 Aligned_cols=48 Identities=17% Similarity=0.135 Sum_probs=39.4
Q ss_pred ccCcCeEEEEcC-CCCcHHHHHHHHHHhC--CccccccCCchhHHHhhHHH
Q psy7639 899 KSAIHDVVLVGG-STRIPKVQSLLQNFFC--GKSLNLSINPDEAVAYGAAV 946 (2568)
Q Consensus 899 ~~~I~~ViLvGG-ssriP~v~~~l~~~f~--~~~v~~~~npdeaVA~GAAl 946 (2568)
...+..|+++|| .+..|.+++.+...+. +.++..+.|+...+|+||++
T Consensus 228 ~~~~~~IvF~Gg~L~~~~~l~~~~~~~~~~~~~~~ifp~h~~y~gAlGAaL 278 (279)
T TIGR00555 228 RYNIDRIVFIGSFLRNNQLLMKVLSYATNFWSKKALFLEHEGYSGAIGALL 278 (279)
T ss_pred HcCCCeEEEECCcccCCHHHHHHHHHHHhhcCceEEEECCcchHHHhhhcc
Confidence 345889999999 6789999999987762 35667788999999999986
No 179
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase). This alignment models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution.
Probab=80.49 E-value=68 Score=40.87 Aligned_cols=94 Identities=27% Similarity=0.355 Sum_probs=57.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHh--CCCCCeEEEEEcCCCCHHH------------HHHHHHHH-HHcCCCeeeecchhHHH
Q psy7639 685 APEEISSMVLTKMKETAEAYL--GHSVRDAVITVPAYFNDAQ------------RQATKDAG-AIAGLNVMRIVNEPTAA 749 (2568)
Q Consensus 685 speev~a~iL~~L~~~ae~~~--~~~~~~~VITVPa~f~~~q------------r~al~~Aa-~~AGl~~l~li~Ep~AA 749 (2568)
+++++...+...+.+..+..- ...+..+.|++|..++... ...+.+.. +..|++ +.+.|+..|+
T Consensus 32 ~~~~~~~~l~~~i~~~~~~~~~~~~~i~gIgva~pG~vd~~~g~~~~~~~~~w~~~~l~~~l~~~~~~p-v~v~NDa~~~ 110 (318)
T TIGR00744 32 TPETIVDAIASAVDSFIQHIAKVGHEIVAIGIGAPGPVNRQRGTVYFAVNLDWKQEPLKEKVEARVGLP-VVVENDANAA 110 (318)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCccceEEEEEeccccccCCCCEEEecCCCCCCCCCHHHHHHHHHCCC-EEEechHHHH
Confidence 567766666666666554321 1346677888887554221 11233333 334765 5799999999
Q ss_pred HHHhccccCCCCCceEEEEEeCCceeEEEEE
Q psy7639 750 ALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 780 (2568)
Q Consensus 750 Al~y~~~~~~~~~~~vlV~D~GgGT~Dvsv~ 780 (2568)
|++-.........++++++.+|.|- -.+++
T Consensus 111 alaE~~~g~~~~~~~~~~v~igtGi-G~giv 140 (318)
T TIGR00744 111 ALGEYKKGAGKGARDVICITLGTGL-GGGII 140 (318)
T ss_pred HHHHHHhcccCCCCcEEEEEeCCcc-EEEEE
Confidence 9875443333345789999999876 55555
No 180
>KOG0677|consensus
Probab=80.15 E-value=33 Score=40.60 Aligned_cols=208 Identities=20% Similarity=0.261 Sum_probs=121.0
Q ss_pred HHHHHHHH-HHhC--CCCCeEEEEecCCCCHHHHHHHHHHH-HHcCCcEEEEecchhHHHHhhccccccCCCceEEEEEe
Q psy7639 122 TKMKETAE-AYLG--HSVRDAVITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDL 197 (2568)
Q Consensus 122 ~~l~~~ae-~~l~--~~~~~~VITVPa~f~~~qr~al~~Aa-~~AGl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~ 197 (2568)
.|+++++= ..+. ..-.++.+|=|+-=....|+.|-+.. +.-|+.-+.+--...-+.++-+.. .=+|+|-
T Consensus 84 ~h~WDytF~ekl~idp~~~KiLLTePPmNP~kNREKm~evMFEkY~F~gvyvaiQAVLtLYAQGL~-------tGvVvDS 156 (389)
T KOG0677|consen 84 EHVWDYTFGEKLKIDPTNCKILLTEPPMNPTKNREKMIEVMFEKYGFGGVYVAIQAVLTLYAQGLL-------TGVVVDS 156 (389)
T ss_pred HHHHHhhhhhhccCCCccCeEEeeCCCCCccccHHHHHHHHHHHcCCCeEEehHHHHHHHHHhccc-------ceEEEec
Confidence 45555541 1223 23347899999999999999998775 666988776644333222222222 3589999
Q ss_pred CCcceEEEEeeecCCcEEEEEeecccccccccchHHHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhcCC---
Q psy7639 198 GGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSS--- 274 (2568)
Q Consensus 198 GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~--- 274 (2568)
|.|-|.+.=+- ++ +...--.+.-.+.|+|+++-|.+.+..+= |...-..+-. ..+..|+.|.-
T Consensus 157 GDGVTHi~PVy--e~--~~l~HLtrRldvAGRdiTryLi~LLl~rG---YafN~tADFE-------TVR~iKEKLCYisY 222 (389)
T KOG0677|consen 157 GDGVTHIVPVY--EG--FVLPHLTRRLDVAGRDITRYLIKLLLRRG---YAFNHTADFE-------TVREIKEKLCYISY 222 (389)
T ss_pred CCCeeEEeeee--cc--eehhhhhhhccccchhHHHHHHHHHHhhc---cccccccchH-------HHHHHHhhheeEee
Confidence 99988776431 12 11111112245789999998887775431 2211112222 22333433321
Q ss_pred --------CCceEEEEee--eccCcceEEeecHHHH---HHHHhhhh-----hhhHHHHHHHHHHcCCCC--CCCCeEEE
Q psy7639 275 --------STEASIEIDA--LYDGIDFYTKISRARF---EELCSDLF-----RSTLQPVEKALQDAKLDK--SAIHDVVL 334 (2568)
Q Consensus 275 --------~~~~~i~i~~--l~~~~d~~~~itR~ef---e~l~~~l~-----~~i~~~i~~~l~~a~~~~--~~i~~ViL 334 (2568)
.-++++-+++ +.+|.- +.+-.+.| |.+++|.+ ..+.+++-.+++.+.++. .--.+|+|
T Consensus 223 d~e~e~kLalETTvLv~~YtLPDGRv--IkvG~ERFeAPE~LFqP~Li~VE~~G~aellF~~iQaaDiD~R~~lYkhIVL 300 (389)
T KOG0677|consen 223 DLELEQKLALETTVLVESYTLPDGRV--IKVGGERFEAPEALFQPHLINVEGPGVAELLFNTIQAADIDIRSELYKHIVL 300 (389)
T ss_pred chhhhhHhhhhheeeeeeeecCCCcE--EEecceeccCchhhcCcceeccCCCcHHHHHHHHHHHhccchHHHHHhHeee
Confidence 1123333332 345543 45556666 46777754 345667778888776543 22579999
Q ss_pred cCCccchHHHHHHHHHHh
Q psy7639 335 VGGSTRIPKVQSLLQNFF 352 (2568)
Q Consensus 335 vGG~sriP~v~~~l~~~f 352 (2568)
.||++--|.+-.+|++.+
T Consensus 301 SGGstMYPGLPSRLEkEl 318 (389)
T KOG0677|consen 301 SGGSTMYPGLPSRLEKEL 318 (389)
T ss_pred cCCcccCCCCcHHHHHHH
Confidence 999999999888777665
No 181
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional
Probab=79.81 E-value=8.1 Score=52.35 Aligned_cols=117 Identities=16% Similarity=0.208 Sum_probs=62.8
Q ss_pred eecHHHHHHHHHHHHHHHHHHHhCCCCCeE-EEEecCCCCHHHHH-HHHHHHHHcCCcEEEEecchhHHHHhh-cccccc
Q psy7639 110 TFAPEEISSMVLTKMKETAEAYLGHSVRDA-VITVPAYFNDAQRQ-ATKDAGAIAGLNVMRIVNEPTAAALAY-GLDKNL 186 (2568)
Q Consensus 110 ~~speel~a~~L~~l~~~ae~~l~~~~~~~-VITVPa~f~~~qr~-al~~Aa~~AGl~~~~li~Ep~AAAl~y-~~~~~~ 186 (2568)
.++++- +...+..|+...+-.-...+.++ +++.-|-=....++ .+.++-+..|+++ ++|+-.+=|-+.| +....+
T Consensus 51 ~Ls~e~-i~r~~~~L~~F~~~~~~~~v~~i~~vATsAvReA~N~~~fl~~i~~~tGl~i-evIsG~eEA~l~~~gv~~~l 128 (496)
T PRK11031 51 ALSNEA-MERGWQCLRLFAERLQDIPPSQIRVVATATLRLAVNADEFLAKAQEILGCPV-QVISGEEEARLIYQGVAHTT 128 (496)
T ss_pred CcCHHH-HHHHHHHHHHHHHHHHhCCCCeEEEEEeHHHHcCcCHHHHHHHHHHHHCCCe-EEeCHHHHHHHHHHhhhhcc
Confidence 345544 34555555555444333344432 23333332333333 4445556679997 5555554444444 555444
Q ss_pred CCCceEEEEEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHH
Q psy7639 187 KGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNR 234 (2568)
Q Consensus 187 ~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~ 234 (2568)
+..+..+|+|+|||+|.+++++ ++...... .-.+|.-.+.+.
T Consensus 129 ~~~~~~lviDIGGGStEl~~~~--~~~~~~~~----Sl~lG~vrl~e~ 170 (496)
T PRK11031 129 GGADQRLVVDIGGASTELVTGT--GAQATSLF----SLSMGCVTWLER 170 (496)
T ss_pred CCCCCEEEEEecCCeeeEEEec--CCceeeee----EEeccchHHHHH
Confidence 4445689999999999999985 33222222 245777555443
No 182
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]
Probab=79.71 E-value=5.2 Score=54.41 Aligned_cols=80 Identities=25% Similarity=0.263 Sum_probs=48.6
Q ss_pred cHHHHHHHHhhhhhhhHHHHHHHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHH
Q psy7639 296 SRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQA 375 (2568)
Q Consensus 296 tR~efe~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~a 375 (2568)
+|.+|-..+-+-+.-.....-+.|.+.+ ...++.|.++||++|.++..+++.+.+ +.++..+ ...|+.+.|+|+.+
T Consensus 371 ~~~~l~ravlEgva~~l~~~~~~l~~~~--g~~~~~i~~~GGgars~~w~Qi~Ad~~-g~~v~~~-~~~e~~a~g~A~~~ 446 (502)
T COG1070 371 TRAHLARAVLEGVAFALADGLEALEELG--GKPPSRVRVVGGGARSPLWLQILADAL-GLPVVVP-EVEEAGALGGAALA 446 (502)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCccEEEEECCcccCHHHHHHHHHHc-CCeeEec-CcccchHHHHHHHH
Confidence 5555444333222222333334555542 234678999999999999999999999 6777654 33455555555555
Q ss_pred HHHc
Q psy7639 376 AILS 379 (2568)
Q Consensus 376 a~ls 379 (2568)
+.-.
T Consensus 447 ~~~~ 450 (502)
T COG1070 447 AAAL 450 (502)
T ss_pred HHHh
Confidence 4443
No 183
>KOG0680|consensus
Probab=79.29 E-value=21 Score=43.72 Aligned_cols=207 Identities=15% Similarity=0.197 Sum_probs=98.6
Q ss_pred CCeEEEEecCCCCHHHHHHHH-HHHHHcCCcEEEEecchhHHHHhhc---cccc---cCCCceEEEEEeCCcceEEEEee
Q psy7639 136 VRDAVITVPAYFNDAQRQATK-DAGAIAGLNVMRIVNEPTAAALAYG---LDKN---LKGERNVLIFDLGGGTFDVSILS 208 (2568)
Q Consensus 136 ~~~~VITVPa~f~~~qr~al~-~Aa~~AGl~~~~li~Ep~AAAl~y~---~~~~---~~~~~~vlV~D~GggT~Dvsv~~ 208 (2568)
-..+|+|=|.+--+.=...+. ---+.-++.. +..-+.|+.+++. .+.. ...+.+.+|+|-|.+-|-+.=+-
T Consensus 93 ~~~ivlTep~~~~psi~~~t~eilFEey~fd~--v~kttaa~lva~~~~~~~ne~~tt~~~~c~lVIDsGysfThIip~v 170 (400)
T KOG0680|consen 93 DHNIVLTEPCMTFPSIQEHTDEILFEEYQFDA--VLKTTAAVLVAFTKYVRNNEDSTTTSSECCLVIDSGYSFTHIIPVV 170 (400)
T ss_pred cceEEEecccccccchhhhHHHHHHHHhccce--EeecCHHHhcchhhhccCCccccccccceEEEEeCCCceEEEehhh
Confidence 357899998874443333333 3334446553 3343444434443 2211 12355899999999977654321
Q ss_pred ecCCcEEEEEeecccccccccchHHHHHHHHHHHHHh---------hhcccCC-CCHHHHHHHHHHHHHHHHhcCCCC-c
Q psy7639 209 IDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKR---------KYKKDMS-VNPRALRRLRTAAERAKRTLSSST-E 277 (2568)
Q Consensus 209 ~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~---------~~~~~~~-~~~~~~~~L~~~aE~aK~~LS~~~-~ 277 (2568)
.|.. ...+.. -..+||..+++.|.+.+.=+..+ +.+.|+- .++ .+.+.-+-+|...-.++ .
T Consensus 171 --~g~~-~~qaV~-RiDvGGK~LTn~LKE~iSyR~lNvmdET~vVNeiKEdvcfVSq----nF~~~m~~~~~k~~~~~~~ 242 (400)
T KOG0680|consen 171 --KGIP-YYQAVK-RIDVGGKALTNLLKETISYRHLNVMDETYVVNEIKEDVCFVSQ----NFKEDMDIAKTKFQENKVM 242 (400)
T ss_pred --cCcc-hhhceE-EeecchHHHHHHHHHHhhhhhhcccchhhhhhhhhhheEEech----hhHHHHHHHhhccccceeE
Confidence 2211 111111 25689999888877665322110 0011110 011 11112222332221111 0
Q ss_pred eEEEEeee--------------ccCcceEEeecHHHH---HHHHhhhhhh-----hHHHHHHHHHHcC--CCCCCCCeEE
Q psy7639 278 ASIEIDAL--------------YDGIDFYTKISRARF---EELCSDLFRS-----TLQPVEKALQDAK--LDKSAIHDVV 333 (2568)
Q Consensus 278 ~~i~i~~l--------------~~~~d~~~~itR~ef---e~l~~~l~~~-----i~~~i~~~l~~a~--~~~~~i~~Vi 333 (2568)
....++.+ .....-.+.++-+.| |-++.|---. |.+.|-+.|.... +.+.-+..|+
T Consensus 243 i~YvLPDF~T~k~Gyvr~~~vk~~~d~qii~L~nErF~IPEilF~Psdi~I~q~GIpEAV~esl~~~Pe~~~p~l~~NIv 322 (400)
T KOG0680|consen 243 IDYVLPDFSTSKRGYVRNEDVKLPEDEQIITLTNERFTIPEILFSPSDIGIQQPGIPEAVLESLSMLPEEVRPLLLENIV 322 (400)
T ss_pred EEEecCCcccccceeEecCCCCCCCCcceeeecccccccchhhcChhhcCcccCCchHHHHHHHHhCHHHHHHHHHhcEE
Confidence 11111111 111112356666666 4455553222 2333444444332 1222367899
Q ss_pred EcCCccchHHHHHHHHHHh
Q psy7639 334 LVGGSTRIPKVQSLLQNFF 352 (2568)
Q Consensus 334 LvGG~sriP~v~~~l~~~f 352 (2568)
++||++..|..+++|...+
T Consensus 323 ~iGGn~~fPgF~~RL~~El 341 (400)
T KOG0680|consen 323 CIGGNSNFPGFRQRLAREL 341 (400)
T ss_pred EecCccCCcchHHHHHHHH
Confidence 9999999999999999877
No 184
>PRK09604 UGMP family protein; Validated
Probab=78.56 E-value=1.7e+02 Score=37.74 Aligned_cols=67 Identities=16% Similarity=0.214 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcCC--cccccCC--c-hhhhhccHHHHHHHHhC
Q psy7639 1678 RSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGK--SLNLSIN--P-DEAVAYGAAVQAAILSG 1749 (2568)
Q Consensus 1678 ~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~--~v~~~~n--P-~eAVA~GAai~a~~l~~ 1749 (2568)
+-+.+.++++++.. .++.|+|.||.....++++.|.+.+... .+..+.. | |.++++|++-+-....|
T Consensus 240 ~~l~~~~~~~~~~~-----~~~~lvlsGGVa~N~~L~~~l~~~~~~~g~~v~~~~~~p~~D~gisIg~ag~~~~~~g 311 (332)
T PRK09604 240 DVLVIKTKRALKQT-----GVKTLVVAGGVAANSGLRERLAELAKKRGIEVFIPPLKLCTDNAAMIAAAGYERLKAG 311 (332)
T ss_pred HHHHHHHHHHHHHh-----CCCeEEEcChHHHHHHHHHHHHHHHHHCCCEEECCCCCCCcHHHHHHHHHHHHHHHcC
Confidence 44445555555543 3667999999999999999999988322 3333332 2 89999999866555544
No 185
>PLN02666 5-oxoprolinase
Probab=77.30 E-value=13 Score=55.14 Aligned_cols=75 Identities=11% Similarity=0.109 Sum_probs=46.1
Q ss_pred CHHHHHHHhHHHH-HHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCCCCCCCCCCcchhHHhhHHH
Q psy7639 2238 SRARFEELCSDLF-RSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAV 2315 (2568)
Q Consensus 2238 tr~~fe~l~~~l~-~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~~~~npdeava~GAa~ 2315 (2568)
+-++.-+-+.++. ....++++.+...-|+++.+. .++-.||+. |..--.|.+.+|-+.+.-.-+|.-.-|+|+++
T Consensus 455 ~~e~aA~~i~~ia~~~m~~air~i~~~~G~dpr~~-~l~afGGag--p~ha~~lA~~lgi~~vivP~~~gv~sA~G~~~ 530 (1275)
T PLN02666 455 SVEEVALGFVRVANEAMCRPIRQLTEMKGYETANH-ALACFGGAG--PQHACAIARALGMSEVFVHRYCGILSAYGMGL 530 (1275)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCc-eEEEecCcH--HHHHHHHHHHcCCCEEEeCCCccHHHHHHHHh
Confidence 3344333333333 334446777777788888775 445566654 66667788888555444445677777888874
No 186
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length. The function of this family is unknown.
Probab=77.27 E-value=19 Score=45.42 Aligned_cols=74 Identities=22% Similarity=0.295 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcCCc--ccccCCc----hhhhhccHHHHHHHH
Q psy7639 1674 SDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKS--LNLSINP----DEAVAYGAAVQAAIL 1747 (2568)
Q Consensus 1674 ~pli~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~--v~~~~nP----~eAVA~GAai~a~~l 1747 (2568)
+-+++.+.+.|...+.. ..+++.|+|.|-.+++|-+++.+++.|...- ......+ -...|.|||+-|.-+
T Consensus 241 ea~~E~i~k~V~~l~~~----~~~~~~IilSGr~~~~~~~~~~l~~~l~~~~~~~v~~l~~~~~~aKeaA~GaAiIA~gl 316 (343)
T PF07318_consen 241 EAMIESIVKAVASLLAS----VPDPDEIILSGRFSRIPEFRKKLEDRLEDYFPVKVRKLEGLARKAKEAAQGAAIIANGL 316 (343)
T ss_pred HHHHHHHHHHHHHHhcc----cCCCCEEEEeccccccHHHHHHHHHHHHhhcccceeecccccccchhhhhhHHHHhhhh
Confidence 33444455555444432 3457889999999999999988888873321 1122233 244899999999888
Q ss_pred hCCC
Q psy7639 1748 SGDQ 1751 (2568)
Q Consensus 1748 ~~~~ 1751 (2568)
.|..
T Consensus 317 aGG~ 320 (343)
T PF07318_consen 317 AGGR 320 (343)
T ss_pred hccc
Confidence 7754
No 187
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3.6.1.11 from EC and guanosine pentaphosphate phosphatase (GppA) 3.6.1.40 from EC belong to the sugar kinase/actin/hsp70 superfamily [].; PDB: 3MDQ_A 1U6Z_A 1T6D_B 2J4R_B 1T6C_A 2FLO_B 3CER_B 3HI0_A.
Probab=75.82 E-value=14 Score=46.44 Aligned_cols=116 Identities=21% Similarity=0.361 Sum_probs=57.6
Q ss_pred EeCHHHHH--HHHHHHHHHHHHHHhCCCCCeEE-EEEcCCCCHHHHHHHH-HHHHHcCCCeeeecchhHHHHHHh-cccc
Q psy7639 683 TFAPEEIS--SMVLTKMKETAEAYLGHSVRDAV-ITVPAYFNDAQRQATK-DAGAIAGLNVMRIVNEPTAAALAY-GLDK 757 (2568)
Q Consensus 683 ~~speev~--a~iL~~L~~~ae~~~~~~~~~~V-ITVPa~f~~~qr~al~-~Aa~~AGl~~l~li~Ep~AAAl~y-~~~~ 757 (2568)
.++++-+- -..|+..++.++. ..+.++. ++.-|.=....+..+. ..-+..|+++- +|+..+=|.+.| +...
T Consensus 31 ~i~~e~i~r~~~~L~~f~~~~~~---~~v~~i~~vATsA~R~A~N~~~~~~~i~~~tGi~i~-iIsgeeEa~l~~~gv~~ 106 (285)
T PF02541_consen 31 RISEEAIERAIDALKRFKEILKD---YGVEKIRAVATSALREAKNSDEFLDRIKKETGIDIE-IISGEEEARLSFLGVLS 106 (285)
T ss_dssp SB-HHHHHHHHHHHHHHHHHHHH---TTGSEEEEEEEHHHHHSTTHHHHHHHHHHHHSS-EE-EE-HHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHH---CCCCEEEEEhhHHHHhCcCHHHHHHHHHHHhCCceE-EecHHHHHHHHHHHHHh
Confidence 45544433 3334444445543 3455543 3322222222233333 34455699874 555555444444 3333
Q ss_pred CCCCCceEEEEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHH
Q psy7639 758 NLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRL 808 (2568)
Q Consensus 758 ~~~~~~~vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l 808 (2568)
.....+..+|+|+|||++.+++++ ++......+ -.+|.-.+.+.+
T Consensus 107 ~l~~~~~~lviDIGGGStEl~~~~--~~~~~~~~S----l~lG~vrl~e~~ 151 (285)
T PF02541_consen 107 SLPPDKNGLVIDIGGGSTELILFE--NGKVVFSQS----LPLGAVRLTERF 151 (285)
T ss_dssp HSTTTSSEEEEEEESSEEEEEEEE--TTEEEEEEE----ES--HHHHHHHH
T ss_pred hccccCCEEEEEECCCceEEEEEE--CCeeeEeee----eehHHHHHHHHH
Confidence 333456799999999999999886 342222222 567877665543
No 188
>PRK10854 exopolyphosphatase; Provisional
Probab=75.67 E-value=10 Score=51.54 Aligned_cols=115 Identities=17% Similarity=0.263 Sum_probs=61.8
Q ss_pred eecHHHHHH--HHHHHHHHHHHHHhCCCCCeE-EEEecCCCCHHHHHHHH-HHHHHcCCcEEEEecchhHHHHhh-cccc
Q psy7639 110 TFAPEEISS--MVLTKMKETAEAYLGHSVRDA-VITVPAYFNDAQRQATK-DAGAIAGLNVMRIVNEPTAAALAY-GLDK 184 (2568)
Q Consensus 110 ~~speel~a--~~L~~l~~~ae~~l~~~~~~~-VITVPa~f~~~qr~al~-~Aa~~AGl~~~~li~Ep~AAAl~y-~~~~ 184 (2568)
.++++-+-. ..|+..++.++.+ .+.++ +++--|.=....+..+. ++-+..|+++ ++|+-.+=|.+.| +...
T Consensus 56 ~Ls~e~~~r~~~~L~~F~~~~~~~---~v~~v~~vATsAlReA~N~~~fl~~i~~~tGl~i-~vIsG~EEA~l~~~gv~~ 131 (513)
T PRK10854 56 MLSEEAMERGLNCLSLFAERLQGF---SPANVCIVGTHTLRQALNATDFLKRAEKVIPYPI-EIISGNEEARLIFMGVEH 131 (513)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHhC---CCCeEEEEehHHHHcCcCHHHHHHHHHHHHCCCe-EEeCHHHHHHHHHhhhhc
Confidence 345544322 2345555555433 33332 23332333333334444 4455669987 5565555554444 5554
Q ss_pred ccCCCceEEEEEeCCcceEEEEeeecCCcEEEEEeecccccccccchHHH
Q psy7639 185 NLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNR 234 (2568)
Q Consensus 185 ~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~ 234 (2568)
.+...+..+|+|+|||+|.+++++- +......+ ..+|.-.+.+.
T Consensus 132 ~l~~~~~~lvvDIGGGStEl~~~~~--~~~~~~~S----~~lG~vrl~e~ 175 (513)
T PRK10854 132 TQPEKGRKLVIDIGGGSTELVIGEN--FEPILVES----RRMGCVSFAQL 175 (513)
T ss_pred ccCCCCCeEEEEeCCCeEEEEEecC--CCeeEeEE----EecceeeHHhh
Confidence 4444457899999999999999863 32222222 35777666554
No 189
>TIGR03706 exo_poly_only exopolyphosphatase. It appears that a single enzyme may act as both exopolyphosphatase (Ppx) and guanosine pentaphosphate phosphohydrolase (GppA) in a number of species. Members of the seed alignment use to define this exception-level model are encoded adjacent to a polyphosphate kinase 1 gene, and the trusted cutoff is set high enough (425) that no genome has a second hit. Therefore all members may be presumed to at least share exopolyphospatase activity, and may lack GppA activity. GppA acts in the stringent response.
Probab=74.76 E-value=15 Score=46.39 Aligned_cols=92 Identities=21% Similarity=0.204 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCceEEEEechhHHHHHhhccccccCcceEEE
Q psy7639 1484 EISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLI 1563 (2568)
Q Consensus 1484 ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~v~~li~EPtAAal~y~~~~~~~~~~~vlV 1563 (2568)
+-....|+.+++.++. ++.....+|-|=--.--..+..++...-...|+++. +++..+=|.+.|.--.........++
T Consensus 52 ~~~~~~l~~f~~~~~~-~~v~~i~~vaTsa~R~A~N~~~~~~~i~~~tgi~i~-visg~eEa~l~~~gv~~~~~~~~~~v 129 (300)
T TIGR03706 52 ERALEALKRFAELLRG-FPVDEVRAVATAALRDAKNGPEFLREAEAILGLPIE-VISGEEEARLIYLGVAHTLPIADGLV 129 (300)
T ss_pred HHHHHHHHHHHHHHHh-CCCCeEEEEEcHHHHcCCCHHHHHHHHHHHHCCCeE-EeChHHHHHHHHHHHHhCCCCCCcEE
Confidence 3444666777777744 343333444443333334455566666677899884 77777766665532111111123599
Q ss_pred EEeCCcceEEEEEE
Q psy7639 1564 FDLGGGTFDVSILS 1577 (2568)
Q Consensus 1564 ~D~GGGT~Dvsi~~ 1577 (2568)
+|+|||++.++++.
T Consensus 130 ~DiGGGSte~~~~~ 143 (300)
T TIGR03706 130 VDIGGGSTELILGK 143 (300)
T ss_pred EEecCCeEEEEEec
Confidence 99999999999986
No 190
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]
Probab=74.35 E-value=7.7 Score=52.79 Aligned_cols=50 Identities=30% Similarity=0.356 Sum_probs=36.8
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHHHHc
Q psy7639 901 AIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 952 (2568)
Q Consensus 901 ~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa~ls 952 (2568)
.++.|.++||++|.++..+++.+.| +.++..+ ...|+.+.|+|+.++.-.
T Consensus 401 ~~~~i~~~GGgars~~w~Qi~Ad~~-g~~v~~~-~~~e~~a~g~A~~~~~~~ 450 (502)
T COG1070 401 PPSRVRVVGGGARSPLWLQILADAL-GLPVVVP-EVEEAGALGGAALAAAAL 450 (502)
T ss_pred CccEEEEECCcccCHHHHHHHHHHc-CCeeEec-CcccchHHHHHHHHHHHh
Confidence 4678999999999999999999999 5666644 334555555555555443
No 191
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=73.88 E-value=1.6e+02 Score=37.54 Aligned_cols=156 Identities=17% Similarity=0.318 Sum_probs=88.6
Q ss_pred cceEEEEEeCCcceEEEEEEecC-CcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHH
Q psy7639 1558 ERNVLIFDLGGGTFDVSILSIDE-GALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAER 1636 (2568)
Q Consensus 1558 ~~~vlV~D~GGGT~Dvsi~~~~~-g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~ 1636 (2568)
...++.+=.-||.+.+-.++ + | .++++...-|. .=|+.||. +.+..|.....-|. +-+.|++
T Consensus 125 ~~p~v~LlVSGGHTqli~~~--~~g-~y~ilGeTlDd-A~Gea~DK---------vAR~lGL~yPGGp~----Ie~lA~~ 187 (342)
T COG0533 125 AFPPVALLVSGGHTQLIAVR--GIG-RYEVLGETLDD-AAGEAFDK---------VARLLGLGYPGGPA----IEKLAKK 187 (342)
T ss_pred CCCcEEEEEecCceEEEEEc--CCC-cEEEEeeechh-hhhHHHHH---------HHHHhCCCCCCcHH----HHHHHhc
Confidence 34567777788888877776 4 5 57888877766 44666664 34444554444441 2222222
Q ss_pred hhcccCCCCeeEEEEcc-ccCC--cceeee------------------cCHHHHHHHHhH----HHHHHHHHHHHHHHHc
Q psy7639 1637 AKRTLSSSTEASIEIDA-LYDG--IDFYTK------------------ISRARFEELCSD----LFRSTLQPVEKALQDA 1691 (2568)
Q Consensus 1637 aK~~Ls~~~~~~i~i~~-~~~~--~~~~~~------------------itr~~fe~l~~p----li~~i~~~i~~~L~~a 1691 (2568)
.... .+.+|. ...+ .||+++ ++.++.+++|.. .++-+++.++++|+..
T Consensus 188 G~~~-------~~~fP~~~~~~~~~DfSFSGLkTa~~~~~~~~~~~~~~~~~d~~dia~sfQ~av~~~L~~kt~rAl~~~ 260 (342)
T COG0533 188 GDPD-------AFEFPRPMVKGKNLDFSFSGLKTAVLRLLKKLKQKEELNEEDKEDIAASFQEAVFDMLVEKTERALKHT 260 (342)
T ss_pred CCCC-------ceeCCccccCCCCcceehHhHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2210 122222 1112 333322 333445555544 5667777778888876
Q ss_pred CCCCccccEEEEecCccCChhHHHHHHhhhcCCcccc-cCCchhhhhccHHH
Q psy7639 1692 KLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNL-SINPDEAVAYGAAV 1742 (2568)
Q Consensus 1692 ~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~-~~nP~eAVA~GAai 1742 (2568)
+ ++.++++||-+....+|+++++.-....+.+ .+.|+.+.-.||-|
T Consensus 261 ~-----~~~lvi~GGVaaN~~LR~~l~~~~~~~g~~~~~p~~~lCtDNaaMI 307 (342)
T COG0533 261 G-----KKELVIAGGVAANSRLREMLEEMCKERGAEVYIPPLELCTDNAAMI 307 (342)
T ss_pred C-----CCEEEEeccHHHhHHHHHHHHHHHHhcCCEEEcCChHhccchHHHH
Confidence 6 4559999999999999999998763222222 23455555555533
No 192
>PLN02666 5-oxoprolinase
Probab=72.70 E-value=21 Score=53.02 Aligned_cols=77 Identities=10% Similarity=0.083 Sum_probs=52.3
Q ss_pred cCHHHHHHHHhH-HHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccccCCchhhhhccHHH
Q psy7639 1664 ISRARFEELCSD-LFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAV 1742 (2568)
Q Consensus 1664 itr~~fe~l~~p-li~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai 1742 (2568)
++-++..+-+.. .-+.+...|+.+....|.++.+.. ++-.||+ =|..--.|.+.++-+.+.++.+|.-.-|+|+++
T Consensus 454 ~~~e~aA~~i~~ia~~~m~~air~i~~~~G~dpr~~~-l~afGGa--gp~ha~~lA~~lgi~~vivP~~~gv~sA~G~~~ 530 (1275)
T PLN02666 454 MSVEEVALGFVRVANEAMCRPIRQLTEMKGYETANHA-LACFGGA--GPQHACAIARALGMSEVFVHRYCGILSAYGMGL 530 (1275)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCce-EEEecCc--HHHHHHHHHHHcCCCEEEeCCCccHHHHHHHHh
Confidence 455554443333 334555666777667788776632 4445554 578888899999877788888999899999875
Q ss_pred H
Q psy7639 1743 Q 1743 (2568)
Q Consensus 1743 ~ 1743 (2568)
-
T Consensus 531 a 531 (1275)
T PLN02666 531 A 531 (1275)
T ss_pred h
Confidence 3
No 193
>KOG0680|consensus
Probab=71.96 E-value=58 Score=40.21 Aligned_cols=98 Identities=15% Similarity=0.188 Sum_probs=53.9
Q ss_pred CCeEEEEEcCCC-CHHHHHHHHHHHHHcCCCeeeecchhHHHHHHhc-cccCC-----CCCceEEEEEeCCceeEEEEEE
Q psy7639 709 VRDAVITVPAYF-NDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYG-LDKNL-----KGERNVLIFDLGGGTFDVSILS 781 (2568)
Q Consensus 709 ~~~~VITVPa~f-~~~qr~al~~Aa~~AGl~~l~li~Ep~AAAl~y~-~~~~~-----~~~~~vlV~D~GgGT~Dvsv~~ 781 (2568)
-..+|+|=|.+- ..-|.....-..+.-++.. +..-+.|+.+++. ..++. ..+...+|+|-|.+-|-+.-+
T Consensus 93 ~~~ivlTep~~~~psi~~~t~eilFEey~fd~--v~kttaa~lva~~~~~~~ne~~tt~~~~c~lVIDsGysfThIip~- 169 (400)
T KOG0680|consen 93 DHNIVLTEPCMTFPSIQEHTDEILFEEYQFDA--VLKTTAAVLVAFTKYVRNNEDSTTTSSECCLVIDSGYSFTHIIPV- 169 (400)
T ss_pred cceEEEecccccccchhhhHHHHHHHHhccce--EeecCHHHhcchhhhccCCccccccccceEEEEeCCCceEEEehh-
Confidence 457899999874 4444444444445666654 3444444444443 11111 124589999999986654322
Q ss_pred EcCCcEEEEEeeccCCCCccchHHHHHHHHH
Q psy7639 782 IDEGALFEVRSTAGDTHLGGEDFDNRLVSHL 812 (2568)
Q Consensus 782 ~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l 812 (2568)
-.|.. ...+.. -..+||..++..|-+.+
T Consensus 170 -v~g~~-~~qaV~-RiDvGGK~LTn~LKE~i 197 (400)
T KOG0680|consen 170 -VKGIP-YYQAVK-RIDVGGKALTNLLKETI 197 (400)
T ss_pred -hcCcc-hhhceE-EeecchHHHHHHHHHHh
Confidence 22311 111111 25689999888776654
No 194
>PF02543 CmcH_NodU: Carbamoyltransferase; InterPro: IPR003696 The putative O-carbamoyltransferases (O-Cases) encoded by the nodU genes of Rhizobium fredii and Bradyrhizobium japonicum are involved in the synthesis of nodulation factors []. The cmcH genes of Nocardia lactamdurans and Streptomyces clavuligerus encode a functional 3'-hydroxymethylcephem O-carbamoyltransferase 2.1.3.7 from EC for cephamycin biosynthesis that shows significant similarity to the O-carbamoyltransferases [].; GO: 0003824 catalytic activity, 0009058 biosynthetic process; PDB: 3VES_A 3VER_A 3VEN_A 3VF2_A 3VEX_A 3VEW_A 3VET_A 3VEO_A 3VEZ_A 3VF4_A.
Probab=69.41 E-value=42 Score=43.54 Aligned_cols=82 Identities=20% Similarity=0.166 Sum_probs=57.3
Q ss_pred ecCHHHHHHHHhHHHHHHH-HHHHHHHHHcCCCCccccE-EEEecCccCChhHHHHHHhhhcCCcccccCCc-hhhhhcc
Q psy7639 1663 KISRARFEELCSDLFRSTL-QPVEKALQDAKLDKSAIHD-VVLVGGSTRIPKVQSLLQNFFCGKSLNLSINP-DEAVAYG 1739 (2568)
Q Consensus 1663 ~itr~~fe~l~~pli~~i~-~~i~~~L~~a~~~~~~Id~-ViLVGGssr~P~V~~~I~~~f~~~~v~~~~nP-~eAVA~G 1739 (2568)
.-.+.++-..++..+++++ ..++.++++.+ ++. |.|.||....-..-..|.+..+-+.+.+++-| |.-+|+|
T Consensus 132 ~~~~~dlAa~~Q~~~E~~v~~~~~~~~~~~g-----~~~~L~laGGvaLN~~~N~~l~~~~~~~~v~V~Pa~gD~G~aiG 206 (360)
T PF02543_consen 132 TQRHADLAASAQKVLEEIVLHLVRHLLERTG-----IDNNLCLAGGVALNCKANGRLLEEPGFDNVFVPPAAGDAGLAIG 206 (360)
T ss_dssp ESS-HHHHHHHHHHHHHHHHHHHHHHHHHHT-------SEEEEESGGGG-HHHHHHHHTSTT-SEEE--TTTSGGGHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCeEEEechHHHHHHHHHHHHhcCCCCeEEECCCCCCcchHHH
Confidence 3566777777777776665 55666776665 455 99999999888888888888655667666555 9999999
Q ss_pred HHHHHHHHhC
Q psy7639 1740 AAVQAAILSG 1749 (2568)
Q Consensus 1740 Aai~a~~l~~ 1749 (2568)
||+++....+
T Consensus 207 aA~~~~~~~~ 216 (360)
T PF02543_consen 207 AALYAWHELG 216 (360)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhc
Confidence 9999976554
No 195
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=68.26 E-value=58 Score=41.22 Aligned_cols=133 Identities=20% Similarity=0.435 Sum_probs=77.7
Q ss_pred eEEEEeeCCeeeEEEEEEEcC-CcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Q psy7639 2133 NVLIFDLGGGTFDVSILSIDE-GALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAK 2211 (2568)
Q Consensus 2133 ~vlv~DlGggt~dvsil~~~~-g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K 2211 (2568)
..+..=+-||.+. |+.+.+ | .++++++.-|.-.| +.||. |.+..|.....-| .+.+|- ++-.
T Consensus 127 p~v~LlVSGGHTq--li~~~~~g-~y~ilGeTlDdA~G-ea~DK---------vAR~lGL~yPGGp-~Ie~lA---~~G~ 189 (342)
T COG0533 127 PPVALLVSGGHTQ--LIAVRGIG-RYEVLGETLDDAAG-EAFDK---------VARLLGLGYPGGP-AIEKLA---KKGD 189 (342)
T ss_pred CcEEEEEecCceE--EEEEcCCC-cEEEEeeechhhhh-HHHHH---------HHHHhCCCCCCcH-HHHHHH---hcCC
Confidence 3444445566666 455555 6 69999999887665 55554 4455555554444 233222 2211
Q ss_pred hccCCcceeEEEEec-ccCC--cceEE------------------eeCHHHHHHHhHH----HHHHhhHHHHHHHHHcCC
Q psy7639 2212 RTLSSSTEASIEIDA-LYDG--IDFYT------------------KISRARFEELCSD----LFRSTLQPVEKALQDAKL 2266 (2568)
Q Consensus 2212 ~~LS~~~~~~~~i~~-~~~~--~d~~~------------------~itr~~fe~l~~~----l~~~~~~~~~~~l~~a~~ 2266 (2568)
. . .+.++. ...+ .||++ .+..++.+++|.. .++-.++.++++|+.-+.
T Consensus 190 ~------~-~~~fP~~~~~~~~~DfSFSGLkTa~~~~~~~~~~~~~~~~~d~~dia~sfQ~av~~~L~~kt~rAl~~~~~ 262 (342)
T COG0533 190 P------D-AFEFPRPMVKGKNLDFSFSGLKTAVLRLLKKLKQKEELNEEDKEDIAASFQEAVFDMLVEKTERALKHTGK 262 (342)
T ss_pred C------C-ceeCCccccCCCCcceehHhHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1 0 022222 2122 23322 2334456666644 456667778888887654
Q ss_pred CccCcceEEEecCccChHHHHHHHHHhc
Q psy7639 2267 DKSAIHDVVLVGGSTRIPKVQSLLQNFF 2294 (2568)
Q Consensus 2267 ~~~~i~~vilvGGstriP~v~~~l~~~f 2294 (2568)
+.++++||-+.=-.+|+++++..
T Consensus 263 -----~~lvi~GGVaaN~~LR~~l~~~~ 285 (342)
T COG0533 263 -----KELVIAGGVAANSRLREMLEEMC 285 (342)
T ss_pred -----CEEEEeccHHHhHHHHHHHHHHH
Confidence 46999999999999999999876
No 196
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis. The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase (P11568 from SWISSPROT). The hypothetical protein AQ_278 from Aquifex aeolicus O66634 from SWISSPROT contains two copies of this region suggesting that the family may structurally dimerise.; PDB: 2E2N_B 2E2Q_A 2E2P_B 2E2O_A 1ZBS_A 2CH6_A 2CH5_D 1ZC6_A 1HUX_A.
Probab=68.26 E-value=12 Score=46.55 Aligned_cols=71 Identities=21% Similarity=0.315 Sum_probs=48.2
Q ss_pred HHHHHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCCCCcHHHHHHHHH----HhCCccccccCCchhHHHhhHHHHH
Q psy7639 875 ELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQN----FFCGKSLNLSINPDEAVAYGAAVQA 948 (2568)
Q Consensus 875 ~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGssriP~v~~~l~~----~f~~~~v~~~~npdeaVA~GAAl~a 948 (2568)
++++...+.+.+.+..++.+....... |+|+||....+.+++.+.+ ..+..++..+..|....|.|||++|
T Consensus 197 ~Il~~a~~~la~~i~~~~~~~~~~~~~---v~l~GGv~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~GAallA 271 (271)
T PF01869_consen 197 DILAEAADELAELIKAVLKRLGPEKEP---VVLSGGVFKNSPLVKALRDALKEKLPKVPIIIPVEPQYDPAYGAALLA 271 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTCCCCS---EEEESGGGGCHHHHHHHGGGS-HHHHCCTCECECCGSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCe---EEEECCccCchHHHHHHHHHHHHhcCCCceEECCCCCccHHHHHHHhC
Confidence 344444555555666666655443322 9999999999777766633 3334455667899999999999986
No 197
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length. The function of this family is unknown.
Probab=67.76 E-value=48 Score=42.01 Aligned_cols=56 Identities=23% Similarity=0.285 Sum_probs=40.0
Q ss_pred ccCcCeEEEEcCCCCcHHHHHHHHHHhCCccc--cccCCc----hhHHHhhHHHHHHHHcCC
Q psy7639 899 KSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSL--NLSINP----DEAVAYGAAVQAAILSGD 954 (2568)
Q Consensus 899 ~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v--~~~~np----deaVA~GAAl~aa~ls~~ 954 (2568)
..+.+.|+|.|-.+++|-+.+.+++.|...-. ...+.+ -...|.|||+.|.-+.|.
T Consensus 258 ~~~~~~IilSGr~~~~~~~~~~l~~~l~~~~~~~v~~l~~~~~~aKeaA~GaAiIA~glaGG 319 (343)
T PF07318_consen 258 VPDPDEIILSGRFSRIPEFRKKLEDRLEDYFPVKVRKLEGLARKAKEAAQGAAIIANGLAGG 319 (343)
T ss_pred cCCCCEEEEeccccccHHHHHHHHHHHHhhcccceeecccccccchhhhhhHHHHhhhhhcc
Confidence 34678999999999999999888887733211 112222 244899999999887764
No 198
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]
Probab=66.70 E-value=21 Score=47.83 Aligned_cols=96 Identities=20% Similarity=0.278 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCC--CHHHHHHHHHHHHHcCCceEEEEechhHHHHHhhccccccCcc
Q psy7639 1482 PEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYF--NDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGER 1559 (2568)
Q Consensus 1482 p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f--~~~qR~~~~~Aa~~AGL~v~~li~EPtAAal~y~~~~~~~~~~ 1559 (2568)
.++.....+..|+..++..-+..+.++.+---+.+ -...-+++..+-+..|+++..|=-|-+|--.+.+.........
T Consensus 50 ~~eai~R~~~aL~~f~e~~~~~~~~~v~~vATsA~R~A~N~~eFl~rv~~~~G~~ievIsGeeEArl~~lGv~~~~~~~~ 129 (492)
T COG0248 50 SEEAIERALSALKRFAELLDGFGAEEVRVVATSALRDAPNGDEFLARVEKELGLPIEVISGEEEARLIYLGVASTLPRKG 129 (492)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCEEEEehhHHHHcCCCHHHHHHHHHHHhCCceEEeccHHHHHHHHHHHHhcCCCCC
Confidence 35556666777777666666666666322211211 2334567888999999999766666666555555544333256
Q ss_pred eEEEEEeCCcceEEEEEE
Q psy7639 1560 NVLIFDLGGGTFDVSILS 1577 (2568)
Q Consensus 1560 ~vlV~D~GGGT~Dvsi~~ 1577 (2568)
..+|+|+|||++.+++..
T Consensus 130 ~~lv~DIGGGStEl~~g~ 147 (492)
T COG0248 130 DGLVIDIGGGSTELVLGD 147 (492)
T ss_pred CEEEEEecCCeEEEEEec
Confidence 789999999999999987
No 199
>TIGR03706 exo_poly_only exopolyphosphatase. It appears that a single enzyme may act as both exopolyphosphatase (Ppx) and guanosine pentaphosphate phosphohydrolase (GppA) in a number of species. Members of the seed alignment use to define this exception-level model are encoded adjacent to a polyphosphate kinase 1 gene, and the trusted cutoff is set high enough (425) that no genome has a second hit. Therefore all members may be presumed to at least share exopolyphospatase activity, and may lack GppA activity. GppA acts in the stringent response.
Probab=64.57 E-value=44 Score=42.33 Aligned_cols=94 Identities=21% Similarity=0.383 Sum_probs=52.6
Q ss_pred EeCHHHH--HHHHHHHHHHHHHHHhCCCCCeE-EEEEcCCCCHHHHHHHHHHH-HHcCCCeeeecchhHHHHHHh-cccc
Q psy7639 683 TFAPEEI--SSMVLTKMKETAEAYLGHSVRDA-VITVPAYFNDAQRQATKDAG-AIAGLNVMRIVNEPTAAALAY-GLDK 757 (2568)
Q Consensus 683 ~~speev--~a~iL~~L~~~ae~~~~~~~~~~-VITVPa~f~~~qr~al~~Aa-~~AGl~~l~li~Ep~AAAl~y-~~~~ 757 (2568)
.++++.+ +...|+..++.++.+ .+.++ +++-.|.=....+..+.+.. +..|+++ ++|+..+=|.+.| +...
T Consensus 45 ~i~~e~i~~~~~~l~~f~~~~~~~---~v~~i~~vaTsa~R~A~N~~~~~~~i~~~tgi~i-~visg~eEa~l~~~gv~~ 120 (300)
T TIGR03706 45 RLSEEAIERALEALKRFAELLRGF---PVDEVRAVATAALRDAKNGPEFLREAEAILGLPI-EVISGEEEARLIYLGVAH 120 (300)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHhC---CCCeEEEEEcHHHHcCCCHHHHHHHHHHHHCCCe-EEeChHHHHHHHHHHHHh
Confidence 3555533 334455555555442 33333 23333332333344444444 5679987 5777777666665 3332
Q ss_pred CCCCCceEEEEEeCCceeEEEEEE
Q psy7639 758 NLKGERNVLIFDLGGGTFDVSILS 781 (2568)
Q Consensus 758 ~~~~~~~vlV~D~GgGT~Dvsv~~ 781 (2568)
..... ..+++|+|||++.++++.
T Consensus 121 ~~~~~-~~~v~DiGGGSte~~~~~ 143 (300)
T TIGR03706 121 TLPIA-DGLVVDIGGGSTELILGK 143 (300)
T ss_pred CCCCC-CcEEEEecCCeEEEEEec
Confidence 22222 359999999999999875
No 200
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis. The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase (P11568 from SWISSPROT). The hypothetical protein AQ_278 from Aquifex aeolicus O66634 from SWISSPROT contains two copies of this region suggesting that the family may structurally dimerise.; PDB: 2E2N_B 2E2Q_A 2E2P_B 2E2O_A 1ZBS_A 2CH6_A 2CH5_D 1ZC6_A 1HUX_A.
Probab=63.40 E-value=16 Score=45.36 Aligned_cols=70 Identities=21% Similarity=0.307 Sum_probs=47.1
Q ss_pred HHhhhhhhhHHHHHHHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHH----hCCCcccccCCchhHHHhhHHHHH
Q psy7639 303 LCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNF----FCGKSLNLSINPDEAVAYGAAVQA 375 (2568)
Q Consensus 303 l~~~l~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~----f~~~~v~~~~npdeaVA~GAa~~a 375 (2568)
++....+.+...+...+........ .|+|+||..+.+.+++.+.+. ....++..+.+|....|.|||++|
T Consensus 198 Il~~a~~~la~~i~~~~~~~~~~~~---~v~l~GGv~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~GAallA 271 (271)
T PF01869_consen 198 ILAEAADELAELIKAVLKRLGPEKE---PVVLSGGVFKNSPLVKALRDALKEKLPKVPIIIPVEPQYDPAYGAALLA 271 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTCCCC---SEEEESGGGGCHHHHHHHGGGS-HHHHCCTCECECCGSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCC---eEEEECCccCchHHHHHHHHHHHHhcCCCceEECCCCCccHHHHHHHhC
Confidence 3444444455555666665543321 299999999997777766433 334455667899999999999986
No 201
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=62.63 E-value=2.6e+02 Score=36.01 Aligned_cols=229 Identities=17% Similarity=0.220 Sum_probs=116.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHhCC------ccceEEEEe-cCCCCHHH--HHHHHHHHHHcCCceEEEEechhHHHHHh
Q psy7639 1479 TFAPEEISSMVLTKMKETAEAYLGH------SVRDAVITV-PAYFNDAQ--RQATKDAGAIAGLNVMRIVNEPTAAALAY 1549 (2568)
Q Consensus 1479 ~~~p~ev~a~iL~~lk~~ae~~l~~------~~~~~ViTV-Pa~f~~~q--R~~~~~Aa~~AGL~v~~li~EPtAAal~y 1549 (2568)
.+.|++....-.+.|-...++.+.. ++.-+.+|+ |..|.--- -..-|--+...|..++ -++--+|-+++-
T Consensus 39 GvvP~~a~r~H~~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl~~~LrVG~~~Ak~LA~a~~~Pli-gV~HlegHi~a~ 117 (345)
T PTZ00340 39 GFLPRETAQHHREHILSLVKEALEEAKITPSDISLICYTKGPGMGAPLSVGAVVARTLSLLWGKPLV-GVNHCVAHIEMG 117 (345)
T ss_pred CcCchHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHhhHHHHHHHHHHHHHHcCCCEe-ecchHHHHHHHH
Confidence 4456555554444444443333322 356677777 76654322 1222333444455543 345444444433
Q ss_pred hccccccCcceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHHHHHHHHHHhhhcCCCCC-CHHHHH
Q psy7639 1550 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSV-NPRALR 1628 (2568)
Q Consensus 1550 ~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~-~~~~~~ 1628 (2568)
.+......+ |++=+-||++.+-. . ..+ .++++...-|. .-|+-||+.= +..+..... --..+.
T Consensus 118 ~l~~~~~~P---l~LlVSGGhT~l~~-~-~~~-~~~ilG~T~Dd-a~Gea~DKva---------r~LGL~~yp~gGp~iE 181 (345)
T PTZ00340 118 RLVTGAENP---VVLYVSGGNTQVIA-Y-SEH-RYRIFGETIDI-AVGNCLDRFA---------RLLNLSNDPAPGYNIE 181 (345)
T ss_pred hhccCCCCC---eEEEEeCCceEEEE-e-cCC-eEEEEEeeccc-chhHHHHHHH---------HHhCCCCCCCChHHHH
Confidence 232222222 78888999999876 2 334 57999988876 4678777543 222333111 122222
Q ss_pred HHHHHHHHhhcccCCCCeeEEEEccccCCcceeee---------cCH----------------HHHHHHHhHH----HHH
Q psy7639 1629 RLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTK---------ISR----------------ARFEELCSDL----FRS 1679 (2568)
Q Consensus 1629 ~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~~~~~~~---------itr----------------~~fe~l~~pl----i~~ 1679 (2568)
+|- ++... .+.+|....+.+|+++ +.+ ....++|..+ ++.
T Consensus 182 ~lA---~~g~~--------~~~~P~~~~~~dfSFSGlkTav~~~i~~~~~~~~~~~~~~~~~~~~~~diaasfq~~v~~~ 250 (345)
T PTZ00340 182 QLA---KKGKN--------LIELPYVVKGMDMSFSGILTYIEDLVEHPQFKDVVSEIVPPEEEFFTDDLCFSLQETIFAM 250 (345)
T ss_pred HHH---hhCCC--------ccCCCCCCCCCcEECccHHHHHHHHHHhccccccccccccccccchHHHHHHHHHHHHHHH
Confidence 222 21111 1223322233444332 111 0123455443 444
Q ss_pred HHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcCCcccc-cCCchhhhhccH
Q psy7639 1680 TLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNL-SINPDEAVAYGA 1740 (2568)
Q Consensus 1680 i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~~v~~-~~nP~eAVA~GA 1740 (2568)
+.+.+.++++.. .+..|+++||-+...++|+.+++....+.+.. -+.|..+.-.||
T Consensus 251 L~~k~~~a~~~~-----~~~~lvv~GGVAaN~~LR~~l~~~~~~~~~~~~~p~~~~ctDNaa 307 (345)
T PTZ00340 251 LVEVTERAMSHC-----GSNEVLIVGGVGCNLRLQEMMQQMAKERGGKLFAMDERYCIDNGA 307 (345)
T ss_pred HHHHHHHHHHHh-----CCCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEeCChHhhhhhHH
Confidence 445555555543 35679999999999999999999874332222 224454544444
No 202
>KOG0681|consensus
Probab=61.71 E-value=11 Score=49.06 Aligned_cols=74 Identities=20% Similarity=0.331 Sum_probs=55.7
Q ss_pred cchHhHHHHHHHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCCCCcHHHHHHHHHHhC-------CccccccCCchhHH
Q psy7639 868 ISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFC-------GKSLNLSINPDEAV 940 (2568)
Q Consensus 868 itr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~-------~~~v~~~~npdeaV 940 (2568)
+...=+.+++..++.+...-.++.| +..|+|+||.|.+|.+.++|++-+- ...|....||-..+
T Consensus 534 ~dQaGl~Ei~~~il~r~p~~eq~~l---------V~nVllTGG~s~~pGmkeRi~kElt~mrP~gS~i~V~rasdP~LDA 604 (645)
T KOG0681|consen 534 IDQAGLAEIMDTILRRYPHDEQEKL---------VSNVLLTGGCSQLPGMKERIKKELTSMRPVGSSINVVRASDPVLDA 604 (645)
T ss_pred chhhhHHHHHHHHHHhCchhhhHhh---------hhheEeecccccCcCHHHHHHHHhheecccCCceEEEecCCcchhh
Confidence 4445556666666666554444444 7889999999999999999998762 23556677999999
Q ss_pred HhhHHHHHHH
Q psy7639 941 AYGAAVQAAI 950 (2568)
Q Consensus 941 A~GAAl~aa~ 950 (2568)
=+||+.+|+.
T Consensus 605 W~GA~~~a~n 614 (645)
T KOG0681|consen 605 WRGASAWAAN 614 (645)
T ss_pred hhhhHHhhcC
Confidence 9999999986
No 203
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=61.03 E-value=4.5e+02 Score=33.98 Aligned_cols=209 Identities=17% Similarity=0.190 Sum_probs=101.5
Q ss_pred eCHHHHHHHHHHHHHHHHHHHh---CC---CCCeEEEEE-cCCCCHHHHHHHH---HHHHHcCCCeeeecchhHHHHHHh
Q psy7639 684 FAPEEISSMVLTKMKETAEAYL---GH---SVRDAVITV-PAYFNDAQRQATK---DAGAIAGLNVMRIVNEPTAAALAY 753 (2568)
Q Consensus 684 ~speev~a~iL~~L~~~ae~~~---~~---~~~~~VITV-Pa~f~~~qr~al~---~Aa~~AGl~~l~li~Ep~AAAl~y 753 (2568)
+-|+.....-.+.|-...++.+ +. .+..+.+|. |.-|+-- |--+- .-|...|.+. .=++.-.|=+++-
T Consensus 40 vvP~~a~r~H~~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl~~~L-rVG~~~Ak~LA~a~~~Pl-igV~HlegHi~a~ 117 (345)
T PTZ00340 40 FLPRETAQHHREHILSLVKEALEEAKITPSDISLICYTKGPGMGAPL-SVGAVVARTLSLLWGKPL-VGVNHCVAHIEMG 117 (345)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHhhH-HHHHHHHHHHHHHcCCCE-eecchHHHHHHHH
Confidence 4566665554554444443333 22 355666666 5544433 22222 2223334333 3445455444332
Q ss_pred ccccCCCCCceEEEEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHHHHhhhccCC-CCCHHHHH
Q psy7639 754 GLDKNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDM-SVNPRALR 832 (2568)
Q Consensus 754 ~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~~~-~~~~~~~~ 832 (2568)
.+......+ |++=+-||+|.+.. ...+ .+++++..-|.. -|+.||+. .+..+... ...-..+.
T Consensus 118 ~l~~~~~~P---l~LlVSGGhT~l~~--~~~~-~~~ilG~T~Dda-~Gea~DKv---------ar~LGL~~yp~gGp~iE 181 (345)
T PTZ00340 118 RLVTGAENP---VVLYVSGGNTQVIA--YSEH-RYRIFGETIDIA-VGNCLDRF---------ARLLNLSNDPAPGYNIE 181 (345)
T ss_pred hhccCCCCC---eEEEEeCCceEEEE--ecCC-eEEEEEeecccc-hhHHHHHH---------HHHhCCCCCCCChHHHH
Confidence 222222223 67777888888765 3334 578888777653 46677753 22222221 11233444
Q ss_pred HHHHHHHHHHHhcCCCCcceeeeccccCCcceEEe---------cch----------------HhHHHHHHHHHHhH---
Q psy7639 833 RLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTK---------ISR----------------ARFEELCSDLFRST--- 884 (2568)
Q Consensus 833 ~L~~~~E~aK~~LS~~~~~~i~i~~l~~~~d~~~~---------itr----------------~efe~l~~~l~~~i--- 884 (2568)
+|-.... . .+.++....+.+|+++ +.+ ...+.+|..+-+-+
T Consensus 182 ~lA~~g~---~--------~~~~P~~~~~~dfSFSGlkTav~~~i~~~~~~~~~~~~~~~~~~~~~~diaasfq~~v~~~ 250 (345)
T PTZ00340 182 QLAKKGK---N--------LIELPYVVKGMDMSFSGILTYIEDLVEHPQFKDVVSEIVPPEEEFFTDDLCFSLQETIFAM 250 (345)
T ss_pred HHHhhCC---C--------ccCCCCCCCCCcEECccHHHHHHHHHHhccccccccccccccccchHHHHHHHHHHHHHHH
Confidence 4432211 1 1111111122333321 111 01234444433333
Q ss_pred -HHHHHHHHHHccCCccCcCeEEEEcCCCCcHHHHHHHHHHhC
Q psy7639 885 -LQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFC 926 (2568)
Q Consensus 885 -~~~i~~~L~~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~ 926 (2568)
.+.+.++++.. .+..++++||-+...++|++|++...
T Consensus 251 L~~k~~~a~~~~-----~~~~lvv~GGVAaN~~LR~~l~~~~~ 288 (345)
T PTZ00340 251 LVEVTERAMSHC-----GSNEVLIVGGVGCNLRLQEMMQQMAK 288 (345)
T ss_pred HHHHHHHHHHHh-----CCCeEEEcCCHHHHHHHHHHHHHHHH
Confidence 33444444433 47889999999999999999999873
No 204
>KOG2708|consensus
Probab=60.84 E-value=57 Score=38.10 Aligned_cols=128 Identities=19% Similarity=0.336 Sum_probs=72.9
Q ss_pred eCCeeeEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhccCCcc
Q psy7639 2139 LGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSST 2218 (2568)
Q Consensus 2139 lGggt~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~LS~~~ 2218 (2568)
..||.++ ++.++++ .+.+-+ +.+|-++- -+++.|.+-.++. .+|.---.+...|.+.|+
T Consensus 131 vSGGNTQ--vIAYse~-rYrIFG---------ETlDIAvG-NClDRFAR~lkls--N~PsPGynieq~AK~gk~------ 189 (336)
T KOG2708|consen 131 VSGGNTQ--VIAYSEK-RYRIFG---------ETLDIAVG-NCLDRFARVLKLS--NDPSPGYNIEQLAKKGKN------ 189 (336)
T ss_pred EeCCceE--EEEEccc-eeeeec---------ceehhhhh-hhHHHHHHHhcCC--CCCCCCcCHHHHHHhccc------
Confidence 4455555 4566666 566654 44444432 3666777665533 222111112222333332
Q ss_pred eeEEEEecccCCcceEEe-------------------eCHHHH-HHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEec
Q psy7639 2219 EASIEIDALYDGIDFYTK-------------------ISRARF-EELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVG 2278 (2568)
Q Consensus 2219 ~~~~~i~~~~~~~d~~~~-------------------itr~~f-e~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvG 2278 (2568)
-|++++...|.|.+++ .|.+++ -.|-+.+|.-.++..+++++..+ =++|++||
T Consensus 190 --~ieLPY~VKGMDvSfSGiLs~ie~~a~~~~~~~~~~t~~DLCySLQEtvFamLVEiTERAMAh~~-----s~evLIVG 262 (336)
T KOG2708|consen 190 --YIELPYTVKGMDVSFSGILSYIEDLAEELLKPSSEVTKEDLCYSLQETVFAMLVEITERAMAHCG-----SKEVLIVG 262 (336)
T ss_pred --eeecceeeeccccchHHHHHHHHHHHhhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCcEEEEe
Confidence 3566665556554432 222222 22334566677778888887654 35789999
Q ss_pred CccChHHHHHHHHHhc
Q psy7639 2279 GSTRIPKVQSLLQNFF 2294 (2568)
Q Consensus 2279 GstriP~v~~~l~~~f 2294 (2568)
|-..=-.+|++...+.
T Consensus 263 GVGCN~RLQeMM~~Mc 278 (336)
T KOG2708|consen 263 GVGCNERLQEMMAIMC 278 (336)
T ss_pred cccccHHHHHHHHHHH
Confidence 9999999999998886
No 205
>KOG0681|consensus
Probab=59.96 E-value=8.4 Score=50.02 Aligned_cols=66 Identities=18% Similarity=0.283 Sum_probs=49.3
Q ss_pred HHHHHHHHHHcCCCCCC--CCeEEEcCCccchHHHHHHHHHHhCC-------CcccccCCchhHHHhhHHHHHHH
Q psy7639 312 LQPVEKALQDAKLDKSA--IHDVVLVGGSTRIPKVQSLLQNFFCG-------KSLNLSINPDEAVAYGAAVQAAI 377 (2568)
Q Consensus 312 ~~~i~~~l~~a~~~~~~--i~~ViLvGG~sriP~v~~~l~~~f~~-------~~v~~~~npdeaVA~GAa~~aa~ 377 (2568)
...+...|......-.. +..|+|+||.|.+|.+.++|...+-. ..|....||-..+=+||+..|+.
T Consensus 540 ~Ei~~~il~r~p~~eq~~lV~nVllTGG~s~~pGmkeRi~kElt~mrP~gS~i~V~rasdP~LDAW~GA~~~a~n 614 (645)
T KOG0681|consen 540 AEIMDTILRRYPHDEQEKLVSNVLLTGGCSQLPGMKERIKKELTSMRPVGSSINVVRASDPVLDAWRGASAWAAN 614 (645)
T ss_pred HHHHHHHHHhCchhhhHhhhhheEeecccccCcCHHHHHHHHhheecccCCceEEEecCCcchhhhhhhHHhhcC
Confidence 34455555554332222 88999999999999999999988722 24555679999999999999885
No 206
>PRK13310 N-acetyl-D-glucosamine kinase; Provisional
Probab=58.11 E-value=2.5e+02 Score=35.54 Aligned_cols=87 Identities=21% Similarity=0.228 Sum_probs=47.1
Q ss_pred eChhhhHHHHHHHHHHHHHHHhCCCcccEEEEccCCCCHHH------------HHHH-HHHHHHcCCceeEEechhhHHH
Q psy7639 2053 FAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQ------------RQAT-KDAGAIAGLNVMRIVNEPTAAA 2119 (2568)
Q Consensus 2053 ~~peei~a~iL~~lk~~ae~~~g~~v~~aVItVPa~f~~~q------------R~a~-~~Aa~~AGl~vl~linEptAaa 2119 (2568)
.+++++...+...+++.... .+ .+..+.|++|...+... .--+ ..-.+.-|+.| .+-|+-.|||
T Consensus 34 ~~~~~~~~~i~~~i~~~~~~-~~-~~~~igia~pG~vd~~~g~~~~~~~~~w~~~~l~~~l~~~~~~pV-~ieNDa~aaa 110 (303)
T PRK13310 34 DSYDAFLDAVCELVAEADQR-FG-CKGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLGRDV-RLDNDANCFA 110 (303)
T ss_pred cCHHHHHHHHHHHHHHHHhh-cC-CcceEEEeCCCcccCCCCEEeccCcccccCCcHHHHHHHHHCCCe-EEeccHhHHH
Confidence 35666666655555443222 11 12246666666553211 0011 11223348876 6999999999
Q ss_pred hhcccccCcCCcceEEEEeeCCe
Q psy7639 2120 LAYGLDKNLKGERNVLIFDLGGG 2142 (2568)
Q Consensus 2120 laYg~~~~~~~~~~vlv~DlGgg 2142 (2568)
++-.........++++++-+|.|
T Consensus 111 laE~~~g~~~~~~~~~~l~~gtG 133 (303)
T PRK13310 111 LSEAWDDEFTQYPLVMGLILGTG 133 (303)
T ss_pred HHHhhhccccCCCcEEEEEecCc
Confidence 98533222123568888888865
No 207
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=57.78 E-value=25 Score=45.31 Aligned_cols=75 Identities=25% Similarity=0.253 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccc----cCCchhHHHhhHHHHH
Q psy7639 873 FEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNL----SINPDEAVAYGAAVQA 948 (2568)
Q Consensus 873 fe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~----~~npdeaVA~GAAl~a 948 (2568)
-+.+..-+.+=+...|.+.++.... .++.|+++||+++.|++.+.|++.+++..+.. .++|+.-=|.+-|++|
T Consensus 259 ~~D~~aTlt~~TA~sI~~~i~~~~~---~~~~v~v~GGGa~N~~L~~~L~~~l~~~~v~~~~~~gi~~~~~EA~aFA~La 335 (364)
T PF03702_consen 259 PEDILATLTEFTAQSIADAIRRFPP---QPDEVYVCGGGARNPFLMERLQERLPGIPVKTTDELGIPPDAKEAMAFAWLA 335 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-T---T-EEEEEESGGGG-HHHHHHHHHH-TTCEEEEGGGGTS-CCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCC---CCceEEEECCCcCCHHHHHHHHhhCCCCEEecHHHcCCCHHHHHHHHHHHHH
Confidence 3445555555556666666666543 27899999999999999999999997755532 3445533444446666
Q ss_pred HH
Q psy7639 949 AI 950 (2568)
Q Consensus 949 a~ 950 (2568)
..
T Consensus 336 ~~ 337 (364)
T PF03702_consen 336 YR 337 (364)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 208
>COG0145 HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=56.95 E-value=9.8 Score=52.76 Aligned_cols=52 Identities=23% Similarity=0.328 Sum_probs=38.2
Q ss_pred HHHHHHHcCCceeEEechhhHHHhhcccc-cCcCCcceEEEEeeCCeeeEEEEEE
Q psy7639 2097 TKDAGAIAGLNVMRIVNEPTAAALAYGLD-KNLKGERNVLIFDLGGGTFDVSILS 2150 (2568)
Q Consensus 2097 ~~~Aa~~AGl~vl~linEptAaalaYg~~-~~~~~~~~vlv~DlGggt~dvsil~ 2150 (2568)
+.++.+.-+..+.-|.+-|.|-.+....- -.. .. ++++|||||.|||||++.
T Consensus 244 l~~~~~a~~~pv~tI~SGPAagvvGAa~ltg~~-~g-~~i~~DmGGTStDva~i~ 296 (674)
T COG0145 244 LVSAEEAREKPVETILSGPAAGVVGAAYLTGLK-AG-NAIVFDMGGTSTDVALII 296 (674)
T ss_pred cccHHHHhcCCeeeEeeccHHHHHHHHHhcccc-cC-CEEEEEcCCcceeeeeee
Confidence 34455556778888899998877765543 221 12 699999999999999887
No 209
>COG3426 Butyrate kinase [Energy production and conversion]
Probab=56.02 E-value=83 Score=38.30 Aligned_cols=50 Identities=20% Similarity=0.138 Sum_probs=36.6
Q ss_pred CCCCCCCeEEEcCCccchHHHHHHHHHHhCC---CcccccCCchhHHHhhHHH
Q psy7639 324 LDKSAIHDVVLVGGSTRIPKVQSLLQNFFCG---KSLNLSINPDEAVAYGAAV 373 (2568)
Q Consensus 324 ~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~---~~v~~~~npdeaVA~GAa~ 373 (2568)
.-+..+|.|+|+||.++...+-++|.++..- ..+.-..+-.+|-|.||-.
T Consensus 292 vL~G~vDaIvLTGGiA~~~~f~~~I~~~v~~iapv~v~PGE~EleALA~G~lR 344 (358)
T COG3426 292 VLKGKVDAIVLTGGIAYEKLFVDAIEDRVSWIAPVIVYPGEDELEALAEGALR 344 (358)
T ss_pred hcCCCCCEEEEecchhhHHHHHHHHHHHHhhhcceEecCCchHHHHHHhhhHH
Confidence 3456799999999999999999999887622 1222234566899999864
No 210
>COG3426 Butyrate kinase [Energy production and conversion]
Probab=55.44 E-value=91 Score=37.98 Aligned_cols=49 Identities=20% Similarity=0.171 Sum_probs=37.0
Q ss_pred CCccCcCeEEEEcCCCCcHHHHHHHHHHhC---CccccccCCchhHHHhhHH
Q psy7639 897 LDKSAIHDVVLVGGSTRIPKVQSLLQNFFC---GKSLNLSINPDEAVAYGAA 945 (2568)
Q Consensus 897 ~~~~~I~~ViLvGGssriP~v~~~l~~~f~---~~~v~~~~npdeaVA~GAA 945 (2568)
.-+..+|.|+|+||.++...+-.+|.++.. ...+.-.-|-.+|.|.||-
T Consensus 292 vL~G~vDaIvLTGGiA~~~~f~~~I~~~v~~iapv~v~PGE~EleALA~G~l 343 (358)
T COG3426 292 VLKGKVDAIVLTGGIAYEKLFVDAIEDRVSWIAPVIVYPGEDELEALAEGAL 343 (358)
T ss_pred hcCCCCCEEEEecchhhHHHHHHHHHHHHhhhcceEecCCchHHHHHHhhhH
Confidence 345679999999999999999999987752 2233334466788999985
No 211
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=54.91 E-value=46 Score=41.16 Aligned_cols=50 Identities=24% Similarity=0.340 Sum_probs=39.8
Q ss_pred CcceEEEecC--ccChH-HHHHHHHHhcCCCCCCCCCCcchhHHhhHHHHHHHhhC
Q psy7639 2270 AIHDVVLVGG--STRIP-KVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSG 2322 (2568)
Q Consensus 2270 ~i~~vilvGG--striP-~v~~~l~~~f~~~~~~~~~npdeava~GAa~~aa~ls~ 2322 (2568)
..+.|+|.|- +.|+| -+++.|+++|. .++ ..+.. +..|.|+|+.|.-+.+
T Consensus 262 ~~~~IvLSGs~g~~r~~~~v~~~I~~~L~-~~V-~~L~~-ksAA~G~AiIA~dI~g 314 (326)
T TIGR03281 262 KEAGVVLAGSGGTLREPINFSGKIKRVLS-CKV-LVLDS-ESAAIGLALIAEDIFS 314 (326)
T ss_pred CCCcEEEeCcchhccCchHHHHHHHHHhC-CCe-EEecc-hhhhhhHHHHHHHHhC
Confidence 4458999987 99999 99999999994 333 23333 8999999999987765
No 212
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=53.73 E-value=1.7e+02 Score=37.46 Aligned_cols=60 Identities=17% Similarity=0.235 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcCC--cccccCC--c-hhhhhccHHH
Q psy7639 1678 RSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGK--SLNLSIN--P-DEAVAYGAAV 1742 (2568)
Q Consensus 1678 ~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~--~v~~~~n--P-~eAVA~GAai 1742 (2568)
+-+.+.+.++++.. .++.|+|.||.....++++.|.+..... .+.++.. | |.++++|++=
T Consensus 245 ~~l~~~~~~~~~~~-----~~~~v~lsGGVa~N~~l~~~l~~~~~~~~~~v~~~~~~p~~D~Gi~Ig~ag 309 (314)
T TIGR03723 245 DVLVEKTKRALKKT-----GLKTLVVAGGVAANSRLRERLEELAEKAGLEVFIPPLELCTDNAAMIAAAG 309 (314)
T ss_pred HHHHHHHHHHHHHh-----CCCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECCCCCCCChHHHHHHHHH
Confidence 33445555555543 3567999999999999999999987322 2333322 2 8888888873
No 213
>PRK09557 fructokinase; Reviewed
Probab=53.05 E-value=5.3e+02 Score=32.52 Aligned_cols=44 Identities=18% Similarity=0.362 Sum_probs=28.6
Q ss_pred cCCCeeeecchhHHHHHHhccccCCCCCceEEEEEeCCceeEEEEE
Q psy7639 735 AGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 780 (2568)
Q Consensus 735 AGl~~l~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GgGT~Dvsv~ 780 (2568)
-|++ +.+.|+..|+|++-.........++++.+.+|.| +-.+++
T Consensus 96 ~~~p-v~~~NDa~aaA~aE~~~g~~~~~~~~~~l~igtG-iG~giv 139 (301)
T PRK09557 96 LNRE-VRLANDANCLAVSEAVDGAAAGKQTVFAVIIGTG-CGAGVA 139 (301)
T ss_pred HCCC-EEEccchhHHHHHHHHhcccCCCCcEEEEEEccc-eEEEEE
Confidence 3775 5799999999987644332334467888888754 334444
No 214
>PRK14878 UGMP family protein; Provisional
Probab=52.91 E-value=2.8e+02 Score=35.60 Aligned_cols=42 Identities=19% Similarity=0.272 Sum_probs=29.6
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHhC--CccccccC---CchhHHHh
Q psy7639 901 AIHDVVLVGGSTRIPKVQSLLQNFFC--GKSLNLSI---NPDEAVAY 942 (2568)
Q Consensus 901 ~I~~ViLvGGssriP~v~~~l~~~f~--~~~v~~~~---npdeaVA~ 942 (2568)
.+..|+|+||.+...++++.+.+.+. +..+..+. -.|.++++
T Consensus 241 g~~~vvlsGGVa~N~~L~~~l~~~~~~~g~~v~~~~~~~~~D~GimI 287 (323)
T PRK14878 241 GKKEVLLVGGVAANRRLREKLEIMAEDRGAKFYVVPPEYAGDNGAMI 287 (323)
T ss_pred CCCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECCCCCCCchHHHHH
Confidence 37789999999999999999998762 22333322 23556655
No 215
>COG0554 GlpK Glycerol kinase [Energy production and conversion]
Probab=52.25 E-value=32 Score=44.99 Aligned_cols=76 Identities=18% Similarity=0.249 Sum_probs=54.8
Q ss_pred HHHHhhhhhhhHHHHHHHH----HHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccccCCchhHHHhhHHHHHH
Q psy7639 301 EELCSDLFRSTLQPVEKAL----QDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAA 376 (2568)
Q Consensus 301 e~l~~~l~~~i~~~i~~~l----~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAa~~aa 376 (2568)
+.+++..++.+.-..++++ ++++. .++.+-+=||.++..++.+...+.+ +.++.++ .-.|+.|+|||+.|+
T Consensus 374 ~hi~RA~LEsiayQ~~dv~~aM~~d~~~---~~~~LrvDGG~s~n~~lmQfqADil-g~~V~Rp-~~~EtTAlGaA~lAG 448 (499)
T COG0554 374 AHIARATLESIAYQTRDVLEAMEKDSGI---KLTRLRVDGGASRNNFLMQFQADIL-GVPVERP-VVLETTALGAAYLAG 448 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCC---CceeEEEcCccccchhHHHHHHHHh-CCeeecc-ccchhhHHHHHHHHh
Confidence 3344444555444444443 34443 5788889999999999999999999 6777664 556888999999999
Q ss_pred HHcCC
Q psy7639 377 ILSGD 381 (2568)
Q Consensus 377 ~ls~~ 381 (2568)
.-.|-
T Consensus 449 la~G~ 453 (499)
T COG0554 449 LAVGF 453 (499)
T ss_pred hhhCc
Confidence 87763
No 216
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=52.05 E-value=1.8e+02 Score=37.27 Aligned_cols=166 Identities=17% Similarity=0.153 Sum_probs=88.7
Q ss_pred CceEEEEEeCCceeEEEEEEEcCCcEEEEEeeccCCCCccchHHHHHHHHHHHHHHhhhcc--CCCCCHHHHHHHHHHHH
Q psy7639 762 ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKK--DMSVNPRALRRLRTAAE 839 (2568)
Q Consensus 762 ~~~vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~l~~~~~~~~~~--~~~~~~~~~~~L~~~~E 839 (2568)
+.+.+|+++|| |+-+.+-.... .|.+ .|.--|-.-+|..+..+-.+.|.+.-.. .-..+.....+|+
T Consensus 162 ~~~r~vlNiGG----IaNlt~l~~~~-~v~g--~DtGPgN~llD~wi~~~~g~~yD~~g~~A~~G~v~~~ll~~ll---- 230 (371)
T COG2377 162 RERRAVLNIGG----IANLTYLPPGG-PVLG--FDTGPGNMLLDAWIQAHGGKPYDKDGAWAASGKVDEALLARLL---- 230 (371)
T ss_pred CCCeEEEeccc----eEEEEecCCCC-ceee--eecCCcchHHHHHHHHhhCCCcCcCcchhhcCCcCHHHHHHHh----
Confidence 36789999999 33333322222 4554 3444567778887777766555432111 1122333444443
Q ss_pred HHHHhcCCCCcceeeeccccCCcceEEe-----------cchHhHHHHHHHHHHhHHHHHHHHHHHccCCccCcCeEEEE
Q psy7639 840 RAKRTLSSSTEASIEIDALYDGIDFYTK-----------ISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLV 908 (2568)
Q Consensus 840 ~aK~~LS~~~~~~i~i~~l~~~~d~~~~-----------itr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLv 908 (2568)
.+.-|+...- ..-+-.+|... ++.+++..-...+ +. ..+++....-....+..+++
T Consensus 231 -~~p~F~~~~P------kStgRe~F~~~wl~~~~~~~~~l~a~Dv~aTL~el---tA---~tIv~s~~~~~~~p~~l~vc 297 (371)
T COG2377 231 -AHPYFALPAP------KSTGRELFNLQWLEQHLDDTQLLNAEDVQATLVEL---TA---ATIVKSVATLQGDPRRLVVC 297 (371)
T ss_pred -hCCcccCCCc------ccCCccccchhhHHHHHhhccCCCHHHHHHHHHHH---HH---HHHHHHHhhccCCCceeEee
Confidence 2222322111 11111122221 3333332222211 11 22233333345567899999
Q ss_pred cCCCCcHHHHHHHHHHhCCccccc----cCCchhHHHhhHHHHHHHH
Q psy7639 909 GGSTRIPKVQSLLQNFFCGKSLNL----SINPDEAVAYGAAVQAAIL 951 (2568)
Q Consensus 909 GGssriP~v~~~l~~~f~~~~v~~----~~npdeaVA~GAAl~aa~l 951 (2568)
||+.+.|.+.+.|...+++..|.. .+++|..=|.+-|++|...
T Consensus 298 GGG~~N~llm~rLa~l~~g~~V~~t~~~g~~gd~~EA~afA~LA~r~ 344 (371)
T COG2377 298 GGGRRNPLLMARLAALLEGVEVATTDEAGLDGDAVEAEAFAWLAWRT 344 (371)
T ss_pred cCCccCHHHHHHHHHhcCCCeeeechhcCCCcchhhHHHHHHHHHHH
Confidence 999999999999999997655532 5678877777778777653
No 217
>KOG2708|consensus
Probab=51.92 E-value=1.3e+02 Score=35.40 Aligned_cols=131 Identities=18% Similarity=0.286 Sum_probs=73.3
Q ss_pred ChhHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHhhcccCCCCeeEEEEccccCCcceeee------------
Q psy7639 1596 GGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTK------------ 1663 (2568)
Q Consensus 1596 GG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~E~aK~~Ls~~~~~~i~i~~~~~~~~~~~~------------ 1663 (2568)
=|+.+|-++-+ +++.|.+-.+. +.+|.--..+.+.+.+.|. -|.+|....|.|.+++
T Consensus 149 FGETlDIAvGN-ClDRFAR~lkl--sN~PsPGynieq~AK~gk~--------~ieLPY~VKGMDvSfSGiLs~ie~~a~~ 217 (336)
T KOG2708|consen 149 FGETLDIAVGN-CLDRFARVLKL--SNDPSPGYNIEQLAKKGKN--------YIELPYTVKGMDVSFSGILSYIEDLAEE 217 (336)
T ss_pred ecceehhhhhh-hHHHHHHHhcC--CCCCCCCcCHHHHHHhccc--------eeecceeeeccccchHHHHHHHHHHHhh
Confidence 35556655543 34556555433 3334333344445555543 2455555555554332
Q ss_pred -------cCHHHHH-HHHhHHHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcCC-cccccCCchh
Q psy7639 1664 -------ISRARFE-ELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGK-SLNLSINPDE 1734 (2568)
Q Consensus 1664 -------itr~~fe-~l~~pli~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~-~v~~~~nP~e 1734 (2568)
.|.+++- .+-+.+|.-+++..++++.-.+ -+.|++|||-.-.-.+|++....-..+ ...+..+-..
T Consensus 218 ~~~~~~~~t~~DLCySLQEtvFamLVEiTERAMAh~~-----s~evLIVGGVGCN~RLQeMM~~Mc~eRgg~~faTDeRf 292 (336)
T KOG2708|consen 218 LLKPSSEVTKEDLCYSLQETVFAMLVEITERAMAHCG-----SKEVLIVGGVGCNERLQEMMAIMCSERGGKLFATDERF 292 (336)
T ss_pred hhcccccccHHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCcEEEEecccccHHHHHHHHHHHHhcCCceEecccce
Confidence 3333332 3334566777777788886544 345999999999999999988776322 1122335556
Q ss_pred hhhccHHH
Q psy7639 1735 AVAYGAAV 1742 (2568)
Q Consensus 1735 AVA~GAai 1742 (2568)
++-.|+-+
T Consensus 293 CIDNG~MI 300 (336)
T KOG2708|consen 293 CIDNGVMI 300 (336)
T ss_pred eeeCchHH
Confidence 66677644
No 218
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=50.76 E-value=67 Score=39.85 Aligned_cols=51 Identities=22% Similarity=0.320 Sum_probs=40.1
Q ss_pred ccEEEEecC--ccCCh-hHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCCC
Q psy7639 1698 IHDVVLVGG--STRIP-KVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGDQ 1751 (2568)
Q Consensus 1698 Id~ViLVGG--ssr~P-~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~~ 1751 (2568)
.+.|+|.|- +++.| .|++.|++.|. .++.. .. .+..|.|+|+-|.-+.+..
T Consensus 263 ~~~IvLSGs~g~~r~~~~v~~~I~~~L~-~~V~~-L~-~ksAA~G~AiIA~dI~gGk 316 (326)
T TIGR03281 263 EAGVVLAGSGGTLREPINFSGKIKRVLS-CKVLV-LD-SESAAIGLALIAEDIFSGK 316 (326)
T ss_pred CCcEEEeCcchhccCchHHHHHHHHHhC-CCeEE-ec-chhhhhhHHHHHHHHhCCc
Confidence 457999988 99999 99999999994 33332 22 3889999999998777654
No 219
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=50.56 E-value=47 Score=43.74 Aligned_cols=86 Identities=26% Similarity=0.314 Sum_probs=58.7
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCceEEEE---echhHHHHHhhccc-cccCcceEEEEEeCCcceEEEEEEecCCcE
Q psy7639 1508 AVITVPAYFNDAQRQATKDAGAIAGLNVMRIV---NEPTAAALAYGLDK-NLKGERNVLIFDLGGGTFDVSILSIDEGAL 1583 (2568)
Q Consensus 1508 ~ViTVPa~f~~~qR~~~~~Aa~~AGL~v~~li---~EPtAAal~y~~~~-~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~ 1583 (2568)
++||==+.=-+..|+.+..-+..||==|+.-. .|..-|+-..+... +.+....++=+|+||||+.+++++ +|
T Consensus 88 VIITGETArKeNA~~v~~~Ls~~aGDFVVATAGPdLEsiiAgkGsGA~~~S~~~~~~V~NiDIGGGTtN~avf~--~G-- 163 (473)
T PF06277_consen 88 VIITGETARKENAREVLHALSGFAGDFVVATAGPDLESIIAGKGSGAAALSKEHHTVVANIDIGGGTTNIAVFD--NG-- 163 (473)
T ss_pred EEEecchhhhhhHHHHHHHHHHhcCCEEEEccCCCHHHHHhccCccHHHHhhhhCCeEEEEEeCCCceeEEEEE--CC--
Confidence 56777777788888889888888886554332 34444433222211 223456788899999999999999 67
Q ss_pred EEEEEecCCCCCChhH
Q psy7639 1584 FEVRSTAGDTHLGGED 1599 (2568)
Q Consensus 1584 ~ev~~~~gd~~lGG~d 1599 (2568)
++.++..- +.||+-
T Consensus 164 -~v~~T~cl-~IGGRL 177 (473)
T PF06277_consen 164 -EVIDTACL-DIGGRL 177 (473)
T ss_pred -EEEEEEEE-eeccEE
Confidence 67777664 478864
No 220
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=50.19 E-value=38 Score=43.75 Aligned_cols=74 Identities=26% Similarity=0.273 Sum_probs=45.4
Q ss_pred HHHHhhhhhhhHHHHHHHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccc----cCCchhHHHhhHHHHHH
Q psy7639 301 EELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNL----SINPDEAVAYGAAVQAA 376 (2568)
Q Consensus 301 e~l~~~l~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~----~~npdeaVA~GAa~~aa 376 (2568)
+++...+.+=+...|.+.++.... .++.|++.||+++-|++.+.|++.+++.++.. .++|+.-=|.+-|++|.
T Consensus 260 ~D~~aTlt~~TA~sI~~~i~~~~~---~~~~v~v~GGGa~N~~L~~~L~~~l~~~~v~~~~~~gi~~~~~EA~aFA~La~ 336 (364)
T PF03702_consen 260 EDILATLTEFTAQSIADAIRRFPP---QPDEVYVCGGGARNPFLMERLQERLPGIPVKTTDELGIPPDAKEAMAFAWLAY 336 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-T---T-EEEEEESGGGG-HHHHHHHHHH-TTCEEEEGGGGTS-CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC---CCceEEEECCCcCCHHHHHHHHhhCCCCEEecHHHcCCCHHHHHHHHHHHHHH
Confidence 344444445555566666666543 27899999999999999999999997655532 24454444445566665
Q ss_pred H
Q psy7639 377 I 377 (2568)
Q Consensus 377 ~ 377 (2568)
.
T Consensus 337 ~ 337 (364)
T PF03702_consen 337 R 337 (364)
T ss_dssp H
T ss_pred H
Confidence 4
No 221
>PRK14878 UGMP family protein; Provisional
Probab=50.13 E-value=3.4e+02 Score=34.85 Aligned_cols=41 Identities=24% Similarity=0.369 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhh
Q psy7639 1676 LFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFF 1721 (2568)
Q Consensus 1676 li~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f 1721 (2568)
+++-+.+.+.++++..+ +..|+|+||-....++++.+.+.+
T Consensus 225 l~~~l~~~~~~~~~~~g-----~~~vvlsGGVa~N~~L~~~l~~~~ 265 (323)
T PRK14878 225 AFAMLVEVTERALAHTG-----KKEVLLVGGVAANRRLREKLEIMA 265 (323)
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEeccHHHHHHHHHHHHHHH
Confidence 33444445555555443 566999999999999999999977
No 222
>COG0554 GlpK Glycerol kinase [Energy production and conversion]
Probab=48.87 E-value=44 Score=43.73 Aligned_cols=76 Identities=18% Similarity=0.249 Sum_probs=54.4
Q ss_pred HHHHHHHHHhHHHHHHHHHH----HccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccccCCchhHHHhhHHHHHH
Q psy7639 874 EELCSDLFRSTLQPVEKALQ----DAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAA 949 (2568)
Q Consensus 874 e~l~~~l~~~i~~~i~~~L~----~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~~~npdeaVA~GAAl~aa 949 (2568)
+.+++..++.+.=..+++++ +++. .+..+-+=||.++..++.+...+.+ +.++.++ .-.|.-|+|||+.|+
T Consensus 374 ~hi~RA~LEsiayQ~~dv~~aM~~d~~~---~~~~LrvDGG~s~n~~lmQfqADil-g~~V~Rp-~~~EtTAlGaA~lAG 448 (499)
T COG0554 374 AHIARATLESIAYQTRDVLEAMEKDSGI---KLTRLRVDGGASRNNFLMQFQADIL-GVPVERP-VVLETTALGAAYLAG 448 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCC---CceeEEEcCccccchhHHHHHHHHh-CCeeecc-ccchhhHHHHHHHHh
Confidence 34444455554444444443 4443 5888889999999999999999999 5666655 445789999999999
Q ss_pred HHcCC
Q psy7639 950 ILSGD 954 (2568)
Q Consensus 950 ~ls~~ 954 (2568)
.-.|-
T Consensus 449 la~G~ 453 (499)
T COG0554 449 LAVGF 453 (499)
T ss_pred hhhCc
Confidence 87763
No 223
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=48.45 E-value=7.4e+02 Score=34.17 Aligned_cols=69 Identities=17% Similarity=0.212 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcC--CcccccC---CchhhhhccHHHHHHHHhC
Q psy7639 1676 LFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCG--KSLNLSI---NPDEAVAYGAAVQAAILSG 1749 (2568)
Q Consensus 1676 li~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~--~~v~~~~---nP~eAVA~GAai~a~~l~~ 1749 (2568)
+.+-+.+.+.++++..+ ++.|+|+||-....++++.+.+.+.. -.+.++. ..|.++++|++.+....++
T Consensus 229 l~~~l~~~~~~~~~~~g-----~~~lvlsGGVa~N~~l~~~l~~~~~~~~~~v~~~~~~~~~D~g~~ia~a~~~~~~~g 302 (535)
T PRK09605 229 AFAMLTEVTERALAHTG-----KDEVLLVGGVAANNRLREMLKEMCEERGADFYVPEPRFCGDNGAMIAWLGLLMYKAG 302 (535)
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECCCCccccchHHHHHHHHHHHHHcC
Confidence 33444455555555443 56699999999999999999976622 2343333 2388999998876554443
No 224
>PF13941 MutL: MutL protein
Probab=47.95 E-value=18 Score=47.85 Aligned_cols=30 Identities=20% Similarity=0.358 Sum_probs=24.3
Q ss_pred CCccccEEEEecC-ccCChhHHHHHHhhhcC
Q psy7639 1694 DKSAIHDVVLVGG-STRIPKVQSLLQNFFCG 1723 (2568)
Q Consensus 1694 ~~~~Id~ViLVGG-ssr~P~V~~~I~~~f~~ 1723 (2568)
+-..+++||-+|| .++.|.-.+.++..+..
T Consensus 382 DL~~v~~iIgtGGvL~h~~~~~~il~~~~~~ 412 (457)
T PF13941_consen 382 DLTRVKYIIGTGGVLTHSPNPEEILKAALDA 412 (457)
T ss_pred ccccCCEEEEeCccccCCCCHHHHHHHHhhc
Confidence 3447999999999 78999988888887743
No 225
>COG0145 HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=46.63 E-value=26 Score=48.72 Aligned_cols=86 Identities=23% Similarity=0.313 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHHHHHHHHHHHHcCCceEEEEechhHHHHHhhccccccCcceE
Q psy7639 1482 PEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNV 1561 (2568)
Q Consensus 1482 p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~qR~~~~~Aa~~AGL~v~~li~EPtAAal~y~~~~~~~~~~~v 1561 (2568)
...+...+|+.+++..++ .|....-++.--=. -+..+-+..+..+..|.+=|.|..+..+.-.....+ ++
T Consensus 211 L~pi~~~yl~~v~~~l~~-~g~~~~l~~m~sdG--------gl~~~~~a~~~pv~tI~SGPAagvvGAa~ltg~~~g-~~ 280 (674)
T COG0145 211 LSPILRRYLEAVKDALKE-RGIKARLMVMQSDG--------GLVSAEEAREKPVETILSGPAAGVVGAAYLTGLKAG-NA 280 (674)
T ss_pred ehHHHHHHHHHHHHHHHh-cCCCceeEEEecCC--------ccccHHHHhcCCeeeEeeccHHHHHHHHHhcccccC-CE
Confidence 456788888888886643 23221111111000 023344446678888999998876654433122233 69
Q ss_pred EEEEeCCcceEEEEEE
Q psy7639 1562 LIFDLGGGTFDVSILS 1577 (2568)
Q Consensus 1562 lV~D~GGGT~Dvsi~~ 1577 (2568)
++||+||-|+|++++.
T Consensus 281 i~~DmGGTStDva~i~ 296 (674)
T COG0145 281 IVFDMGGTSTDVALII 296 (674)
T ss_pred EEEEcCCcceeeeeee
Confidence 9999999999999987
No 226
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=46.08 E-value=7.6e+02 Score=31.66 Aligned_cols=57 Identities=18% Similarity=0.276 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcCC--cccccCC---chhhhhcc
Q psy7639 1678 RSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGK--SLNLSIN---PDEAVAYG 1739 (2568)
Q Consensus 1678 ~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~~--~v~~~~n---P~eAVA~G 1739 (2568)
+-+.+.++++++..+ +..|+|.||.....++++.|.+.+... .+..+.. -|.++++|
T Consensus 228 ~~l~~~a~~~~~~~g-----~~~lvlsGGVa~N~~L~~~l~~~l~~~g~~v~~~~~~p~~D~Gi~Ig 289 (322)
T TIGR03722 228 AMLVEVTERALAHTG-----KKEVLLVGGVAANRRLREMLELMAEDRGAKFYVPPPEYAGDNGAMIA 289 (322)
T ss_pred HHHHHHHHHHHHHhC-----CCeEEEeccHHHHHHHHHHHHHHHHHCCCEEEcCCCCCCchHHHHHH
Confidence 334445555555443 566999999999999999999965322 3333222 27778887
No 227
>PF08735 DUF1786: Putative pyruvate format-lyase activating enzyme (DUF1786); InterPro: IPR014846 This family is annotated as pyruvate formate-lyase activating enzyme (1.97.1.4 from EC) in UniProt. It is not clear where this annotation comes from.
Probab=45.28 E-value=79 Score=38.48 Aligned_cols=103 Identities=20% Similarity=0.365 Sum_probs=61.3
Q ss_pred eeecHHHHHHHHH--HHHHHHHHHHhCCCCCeEEE--EecCCCCHHHHHHHHHHHHHcCCcEEEEecchhHHHHhhcccc
Q psy7639 109 KTFAPEEISSMVL--TKMKETAEAYLGHSVRDAVI--TVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDK 184 (2568)
Q Consensus 109 ~~~speel~a~~L--~~l~~~ae~~l~~~~~~~VI--TVPa~f~~~qr~al~~Aa~~AGl~~~~li~Ep~AAAl~y~~~~ 184 (2568)
+.|+|. .+.... +++++..+ -+..+.+++. .+|.+||-- +++++++.-+|.+. .+++-..||.+....+.
T Consensus 88 HG~~p~-~SnR~~RF~~~~~~L~--~g~~~~~~~y~~~~P~~~TRm--~av~~~~~~~~~~~-~vmDTg~AAvlGal~d~ 161 (254)
T PF08735_consen 88 HGFSPG-QSNRIFRFELWREFLE--EGGRPESFVYADDPPPYFTRM--RAVRESLGGAGYDE-VVMDTGPAAVLGALCDP 161 (254)
T ss_pred cCCCCC-CccHHHHHHHHHHHHh--cCCCHHHeeecCCCcHHHHHH--HHHHHHhccCCCCc-eEecCHHHHHhhhhcCh
Confidence 456665 444443 23333332 2566778888 899987643 56666666666666 44444444444444443
Q ss_pred ccCCCceEEEEEeCCcceEEEEeeecCCcEEEEEe
Q psy7639 185 NLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRS 219 (2568)
Q Consensus 185 ~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~v~~ 219 (2568)
.....+.++++|+|-|+|-+.++ .++.++-+-.
T Consensus 162 ~v~~~~~~~~vniGN~HTlaa~v--~~~rI~GvfE 194 (254)
T PF08735_consen 162 EVSSREGIIVVNIGNGHTLAALV--KDGRIYGVFE 194 (254)
T ss_pred hhhccCCeEEEEeCCccEEEEEE--eCCEEEEEEe
Confidence 33446789999999999988887 3454433333
No 228
>PRK09698 D-allose kinase; Provisional
Probab=44.13 E-value=7.6e+02 Score=31.11 Aligned_cols=87 Identities=16% Similarity=0.102 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHhCCCcccEEEEccCCCCHH---------------HHHHHHH-HHHHcCCceeEEechhhHHHhhc
Q psy7639 2059 SSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDA---------------QRQATKD-AGAIAGLNVMRIVNEPTAAALAY 2122 (2568)
Q Consensus 2059 ~a~iL~~lk~~ae~~~g~~v~~aVItVPa~f~~~---------------qR~a~~~-Aa~~AGl~vl~linEptAaalaY 2122 (2568)
...+...+++..+++ +..+..+.|++|..++.. +..-+++ -.+..|+.| .+.|+-.|||++-
T Consensus 44 ~~~l~~~i~~~~~~~-~~~i~gigia~pG~vd~~~g~i~~~~~~~~~~~~~~~l~~~l~~~~~~pv-~v~NDa~aaa~~E 121 (302)
T PRK09698 44 VSGLGEMIDEYLRRF-NARCHGIVMGFPALVSKDRRTVISTPNLPLTALDLYDLADKLENTLNCPV-FFSRDVNLQLLWD 121 (302)
T ss_pred HHHHHHHHHHHHHHc-CCCeeEEEEeCCcceeCCCCEEEecCCCCccccccCCHHHHHHHHhCCCE-EEcchHhHHHHHH
Confidence 444444444444432 345667777777655321 0001111 122348875 7999999999864
Q ss_pred ccccCcCCcceEEEEeeCCeeeEEEEE
Q psy7639 2123 GLDKNLKGERNVLIFDLGGGTFDVSIL 2149 (2568)
Q Consensus 2123 g~~~~~~~~~~vlv~DlGggt~dvsil 2149 (2568)
..... ....+++++.+|.| .-.+++
T Consensus 122 ~~~~~-~~~~~~~~v~lgtG-IG~giv 146 (302)
T PRK09698 122 VKENN-LTQQLVLGAYLGTG-MGFAVW 146 (302)
T ss_pred HHhcC-CCCceEEEEEecCc-eEEEEE
Confidence 33221 13457888888866 334444
No 229
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=43.72 E-value=82 Score=40.74 Aligned_cols=72 Identities=18% Similarity=0.255 Sum_probs=46.2
Q ss_pred HHHHHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCCccccc----cCCchhHHHhhHHHHHHH
Q psy7639 875 ELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNL----SINPDEAVAYGAAVQAAI 950 (2568)
Q Consensus 875 ~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~~~v~~----~~npdeaVA~GAAl~aa~ 950 (2568)
.++.-+.+=+...|.+.+.... ...+.|+++||+++.|++.++|++.++ .++.. .+++|.-=|..-|++|..
T Consensus 263 D~~aTlt~~TA~sI~~~~~~~~---~~~~~vlv~GGGa~N~~Lm~~L~~~l~-~~v~~~~~~G~~~da~EA~aFA~La~~ 338 (365)
T PRK09585 263 DVQATLTELTAASIARAVRRLP---PGPDELLVCGGGARNPTLMERLAALLP-TEVATTDALGIDGDAKEALAFAWLAVR 338 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCCCEEEEECCCcchHHHHHHHHHhcC-CcccCHHHcCCChhHHHHHHHHHHHHH
Confidence 3344444444555566665433 225689999999999999999999995 33322 245565555555677754
No 230
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=43.69 E-value=53 Score=43.26 Aligned_cols=116 Identities=21% Similarity=0.245 Sum_probs=68.3
Q ss_pred eecHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEe---cchhHHHHhhccc-cc
Q psy7639 110 TFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIV---NEPTAAALAYGLD-KN 185 (2568)
Q Consensus 110 ~~speel~a~~L~~l~~~ae~~l~~~~~~~VITVPa~f~~~qr~al~~Aa~~AGl~~~~li---~Ep~AAAl~y~~~-~~ 185 (2568)
.+..+.|-..+.+..+..--.--...-.-++||=-+--.+++|..+..-+..||==++.-- -|+.=|+-..|-. ..
T Consensus 59 ~ID~~al~~iv~~eY~~Agi~p~~I~TGAVIITGETArKeNA~~v~~~Ls~~aGDFVVATAGPdLEsiiAgkGsGA~~~S 138 (473)
T PF06277_consen 59 EIDAEALKEIVEEEYRKAGITPEDIDTGAVIITGETARKENAREVLHALSGFAGDFVVATAGPDLESIIAGKGSGAAALS 138 (473)
T ss_pred ccCHHHHHHHHHHHHHHcCCCHHHCccccEEEecchhhhhhHHHHHHHHHHhcCCEEEEccCCCHHHHHhccCccHHHHh
Confidence 4556666665555554331110011223467788888888888888888888884333211 1222222111111 11
Q ss_pred cCCCceEEEEEeCCcceEEEEeeecCCcEEEEEeecccccccccch
Q psy7639 186 LKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDF 231 (2568)
Q Consensus 186 ~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~~v~~~~gd~~lGG~~~ 231 (2568)
.+....|+=+|+||||+.+++++- | ++.++.. -++||+-+
T Consensus 139 ~~~~~~V~NiDIGGGTtN~avf~~--G---~v~~T~c-l~IGGRLi 178 (473)
T PF06277_consen 139 KEHHTVVANIDIGGGTTNIAVFDN--G---EVIDTAC-LDIGGRLI 178 (473)
T ss_pred hhhCCeEEEEEeCCCceeEEEEEC--C---EEEEEEE-EeeccEEE
Confidence 234578999999999999999974 5 4555443 67899876
No 231
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=42.67 E-value=5.6e+02 Score=32.60 Aligned_cols=43 Identities=23% Similarity=0.467 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcC
Q psy7639 1676 LFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCG 1723 (2568)
Q Consensus 1676 li~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~ 1723 (2568)
+.+-+.+.++++++..+ ++.|+|.||.....++++.+.+.+..
T Consensus 242 l~~~l~~~~~~~~~~~g-----~~~vvlsGGVa~N~~L~~~l~~~~~~ 284 (305)
T TIGR00329 242 AFDHLIEKTKRALKDTG-----PKELVLVGGVSANKRLREMLETLCQE 284 (305)
T ss_pred HHHHHHHHHHHHHHHcC-----CCEEEEECCHHHHHHHHHHHHHHHHH
Confidence 34444455566665543 66799999999999999999998743
No 232
>COG2192 Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones]
Probab=41.88 E-value=8.1e+02 Score=33.33 Aligned_cols=83 Identities=18% Similarity=0.160 Sum_probs=54.6
Q ss_pred ecCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHH-HHHHhhhcCCcccccCCc-hhhhhccH
Q psy7639 1663 KISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQ-SLLQNFFCGKSLNLSINP-DEAVAYGA 1740 (2568)
Q Consensus 1663 ~itr~~fe~l~~pli~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~-~~I~~~f~~~~v~~~~nP-~eAVA~GA 1740 (2568)
+..-.++-...+-.+++++--+-+-+.+... .+.+.|.||....-..- +.+.+-+ ...+.+.+.+ |.-.|.||
T Consensus 255 ~~~~~diAasaQ~~lE~l~l~~~~~~~~~~g----~~~L~~AGGVAlNv~~N~~~l~~~~-f~dlfV~Pa~gD~G~AvGA 329 (555)
T COG2192 255 TERAADIAASAQAYLEELVLEMLRYLREETG----EDNLALAGGVALNVKANGKLLRRGL-FEDLFVQPAMGDAGLAVGA 329 (555)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhC----ccceEEccceeeeeeehHhHhhccc-CceeEecCCCCCcchHHHH
Confidence 3444555566677777777666665554421 45699999987766665 6666655 3345444444 88899999
Q ss_pred HHHHHHHhCC
Q psy7639 1741 AVQAAILSGD 1750 (2568)
Q Consensus 1741 ai~a~~l~~~ 1750 (2568)
|+++....+.
T Consensus 330 Al~~~~~~~~ 339 (555)
T COG2192 330 ALAVKRELGG 339 (555)
T ss_pred HHHHHHHhcC
Confidence 9998766553
No 233
>smart00842 FtsA Cell division protein FtsA. FtsA is essential for bacterial cell division, and co-localizes to the septal ring with FtsZ. It has been suggested that the interaction of FtsA-FtsZ has arisen through coevolution in different bacterial strains PUBMED:9352931.
Probab=41.56 E-value=96 Score=36.29 Aligned_cols=30 Identities=40% Similarity=0.326 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHcCCcEEEEecchhHHHHh
Q psy7639 150 AQRQATKDAGAIAGLNVMRIVNEPTAAALA 179 (2568)
Q Consensus 150 ~qr~al~~Aa~~AGl~~~~li~Ep~AAAl~ 179 (2568)
...+.+.++.+.|||++..++-+|.|++.+
T Consensus 157 ~~v~n~~~~v~~agl~v~~i~~~~~A~~~a 186 (187)
T smart00842 157 SAIQNLEKCVERAGLEVDGIVLEPLASAEA 186 (187)
T ss_pred HHHHHHHHHHHHcCCchhhEEehhhhhEec
Confidence 457788899999999999999999998754
No 234
>PF00349 Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P). The enzyme can catalyse this reaction on glucose, fructose, sorbitol and glucosamine, and as such is the first step in a number of metabolic pathways []. The addition of a phosphate group to the sugar acts to trap it in a cell, since the negatively charged phosphate cannot easily traverse the plasma membrane. The enzyme is widely distributed in eukaryotes. There are three isozymes of hexokinase in yeast (PI, PII and glucokinase): isozymes PI and PII phosphorylate both aldo- and keto-sugars; glucokinase is specific for aldo-hexoses. All three isozymes contain two domains []. Structural studies of yeast hexokinase reveal a well-defined catalytic pocket that binds ATP and hexose, allowing easy transfer of the phosphate from ATP to the sugar []. Vertebrates contain four hexokinase isozymes, designated I to IV, where types I to III contain a duplication of the two-domain yeast-type hexokinases. Both the N- and C-terminal halves bind hexose and H6P, though in types I an III only the C-terminal half supports catalysis, while both halves support catalysis in type II. The N-terminal half is the regulatory region. Type IV hexokinase is similar to the yeast enzyme in containing only the two domains, and is sometimes incorrectly referred to as glucokinase. The different vertebrate isozymes differ in their catalysis, localisation and regulation, thereby contributing to the different patterns of glucose metabolism in different tissues []. Whereas types I to III can phosphorylate a variety of hexose sugars and are inhibited by glucose-6-phosphate (G6P), type IV is specific for glucose and shows no G6P inhibition. Type I enzyme may have a catabolic function, producing H6P for energy production in glycolysis; it is bound to the mitochondrial membrane, which enables the coordination of glycolysis with the TCA cycle. Types II and III enzyme may have anabolic functions, providing H6P for glycogen or lipid synthesis. Type IV enzyme is found in the liver and pancreatic beta-cells, where it is controlled by insulin (activation) and glucagon (inhibition). In pancreatic beta-cells, type IV enzyme acts as a glucose sensor to modify insulin secretion. Mutations in type IV hexokinase have been associated with diabetes mellitus. Hexokinase (2.7.1.1 from EC), a fructose and glucose phosphorylating enzyme, contains two structurally similar domains represented by this family and PF03727 from PFAM. Some hexokinases have two copies of each of these domains. This entry represents the N-terminal domain.; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 3O1W_A 3O6W_A 3O4W_B 3O08_B 3O80_A 3O5B_A 3O8M_A 3O1B_A 1BG3_A 4DHY_A ....
Probab=41.40 E-value=59 Score=38.74 Aligned_cols=55 Identities=18% Similarity=0.385 Sum_probs=35.6
Q ss_pred CcceEEEEeeCCeeeEEEEEEEcCCcEEEEEEeccC---CCcchhHHHHHHHHHHHHHHH
Q psy7639 2130 GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGD---THLGGEDFDNRLVSHLAEEFK 2186 (2568)
Q Consensus 2130 ~~~~vlv~DlGggt~dvsil~~~~g~~~~v~~~~gd---~~lGG~d~D~~l~~~~~~~f~ 2186 (2568)
....+|+.||||.+|-|.++++.++..+++....+. ...-|.. ..|.+|+++.+.
T Consensus 61 E~G~~LalDlGGTnlRv~~V~L~g~~~~~~~~~~~~ip~~~~~~~~--~~lFd~ia~~i~ 118 (206)
T PF00349_consen 61 EKGDFLALDLGGTNLRVALVELSGNGKVEIEQEKYKIPEELMNGSG--EELFDFIADCIA 118 (206)
T ss_dssp TEEEEEEEEESSSSEEEEEEEEESSSEEEEEEEEEE--HHHHTSBH--HHHHHHHHHHHH
T ss_pred CCceEEEEeecCcEEEEEEEEEcCCCCceeeeccccCChHHhcCCc--ccHHHHHHHHHH
Confidence 356899999999999999999976645555433222 1111221 556777776544
No 235
>PRK00976 hypothetical protein; Provisional
Probab=40.99 E-value=68 Score=40.59 Aligned_cols=51 Identities=20% Similarity=0.242 Sum_probs=38.9
Q ss_pred cccEEEEecCccCCh--hHHHHHHhhhcCCcccccCCchhhhhccHHHHHHHHhCC
Q psy7639 1697 AIHDVVLVGGSTRIP--KVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSGD 1750 (2568)
Q Consensus 1697 ~Id~ViLVGGssr~P--~V~~~I~~~f~~~~v~~~~nP~eAVA~GAai~a~~l~~~ 1750 (2568)
+.+.|+|-||-++.+ .+.+.+++.+.. . ...-...|-++|||+.|.-+.+.
T Consensus 263 DPe~IVLGGGVS~~~e~~L~~~I~e~l~~-~--~a~LG~dAGaiGAA~iA~~i~~G 315 (326)
T PRK00976 263 PEDNVVLAGSVGEMDEPDVSERIKELLDK-K--VLVLGKESAAIGLALIARDIFNG 315 (326)
T ss_pred CCCEEEEcCccccCchhHHHHHHHHHhcc-c--ccccCCchHHHHHHHHHHHHhCC
Confidence 367799999999998 899999998833 2 22233689999999998766554
No 236
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=40.60 E-value=6.3e+02 Score=32.28 Aligned_cols=46 Identities=20% Similarity=0.338 Sum_probs=34.3
Q ss_pred cCcceEEEecCccChHHHHHHHHHhcCCC--CC---CCCCCcchhHHhhHH
Q psy7639 2269 SAIHDVVLVGGSTRIPKVQSLLQNFFCGK--SL---NLSINPDEAVAYGAA 2314 (2568)
Q Consensus 2269 ~~i~~vilvGGstriP~v~~~l~~~f~~~--~~---~~~~npdeava~GAa 2314 (2568)
..++.|+|.||...=..+++.|.+..... .+ ..-..-|.++++|+|
T Consensus 258 ~~~~~v~lsGGVa~N~~l~~~l~~~~~~~~~~v~~~~~~p~~D~Gi~Ig~a 308 (314)
T TIGR03723 258 TGLKTLVVAGGVAANSRLRERLEELAEKAGLEVFIPPLELCTDNAAMIAAA 308 (314)
T ss_pred hCCCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECCCCCCCChHHHHHHHH
Confidence 36788999999999999999998876221 11 222356899999986
No 237
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X.
Probab=40.46 E-value=2.3e+02 Score=37.42 Aligned_cols=48 Identities=23% Similarity=0.324 Sum_probs=35.6
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHH
Q psy7639 1668 RFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQS 1715 (2568)
Q Consensus 1668 ~fe~l~~pli~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~ 1715 (2568)
-++++.+-+++.+...+.+.+.++++++++|..++++|-++-.-++..
T Consensus 54 ~~~~L~~~i~~~i~~li~~l~~~~gi~~~~I~~i~i~GNt~M~hLllG 101 (412)
T PF14574_consen 54 GLEELQRLIRETINELIEELLEKAGISPEDIYEIVIVGNTTMLHLLLG 101 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT--GGGEEEEEEEE-HHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeEEEEEEecHHHHHHHcC
Confidence 355566667788888899999999999999999999997765555443
No 238
>cd06007 R3H_DEXH_helicase R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=40.36 E-value=65 Score=30.26 Aligned_cols=41 Identities=12% Similarity=0.218 Sum_probs=34.0
Q ss_pred HHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCcee
Q psy7639 2067 KETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVM 2109 (2568)
Q Consensus 2067 k~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl 2109 (2568)
.+..++|...+ ...++.|+.|+..||..+-+.|+-.||.--
T Consensus 5 ~~~i~~F~~~~--~~~l~Fpp~ls~~eR~~vH~~a~~~gL~s~ 45 (59)
T cd06007 5 NKALEDFRASD--NEEYEFPSSLTNHERAVIHRLCRKLGLKSK 45 (59)
T ss_pred HHHHHHHHcCc--ccEEEcCCCCCHHHHHHHHHHHHHcCCCce
Confidence 34456666655 788999999999999999999999998763
No 239
>PRK00976 hypothetical protein; Provisional
Probab=40.06 E-value=77 Score=40.12 Aligned_cols=50 Identities=20% Similarity=0.246 Sum_probs=39.1
Q ss_pred CcceEEEecCccChH--HHHHHHHHhcCCCCCCCCCCcchhHHhhHHHHHHHhhC
Q psy7639 2270 AIHDVVLVGGSTRIP--KVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILSG 2322 (2568)
Q Consensus 2270 ~i~~vilvGGstriP--~v~~~l~~~f~~~~~~~~~npdeava~GAa~~aa~ls~ 2322 (2568)
|.+.|+|-||-++++ .+.+.+++++.. . ...-.++|.++|||+.|--+.+
T Consensus 263 DPe~IVLGGGVS~~~e~~L~~~I~e~l~~-~--~a~LG~dAGaiGAA~iA~~i~~ 314 (326)
T PRK00976 263 PEDNVVLAGSVGEMDEPDVSERIKELLDK-K--VLVLGKESAAIGLALIARDIFN 314 (326)
T ss_pred CCCEEEEcCccccCchhHHHHHHHHHhcc-c--ccccCCchHHHHHHHHHHHHhC
Confidence 577899999999998 788888888832 2 2334569999999998876644
No 240
>PF03630 Fumble: Fumble ; InterPro: IPR004567 Pantothenate kinase (PanK or CoaA) catalyses the first step of the universal five step coenzyme A (CoA) biosynthesis pathway. CoA is a ubiquitous and essential cofactor in all living organsims. Pantothenate kinase catalyses the first and rate limiting step in the CoA biosynthetic pathway, which involves transferring a phosphoryl group from ATP to pantothenate, also known as vitamin B5. Three distinct types of pantothenate kinase enzymes have been identified: type I PanK enzymes are typified by the E. coli CoaA protein, type II enzymes are primarily found in eukaryotic organisms whilst type III enzymes have a wider phylogenic distribution and are not feedback inhibited by CoA []. This family describes the type II (primarily eukaryotic) form of pantothenate kinase PanK, characterised from the fungus Emericella nidulans and with similar forms known in several other eukaryotes. It also includes forms from several Gram-positive bacteria suggested to have originated from the eukaryotic form by lateral transfer. It differs in a number of biochemical properties (such as inhibition by acetyl-CoA) from type I PanK enzymes and shows little sequence similarity [, ].; GO: 0004594 pantothenate kinase activity, 0005524 ATP binding, 0015937 coenzyme A biosynthetic process; PDB: 3SMP_B 2I7N_B 2EWS_B 2I7P_C 3SMS_A 3MK6_D.
Probab=37.87 E-value=2.4e+02 Score=36.42 Aligned_cols=72 Identities=19% Similarity=0.257 Sum_probs=44.1
Q ss_pred HHHHhHHHHHHHHHHHHH-HHHcCCCCccccEEEEecCccCC-hhHHHHHH---hhhc--CCcccccCCchhhhhccHHH
Q psy7639 1670 EELCSDLFRSTLQPVEKA-LQDAKLDKSAIHDVVLVGGSTRI-PKVQSLLQ---NFFC--GKSLNLSINPDEAVAYGAAV 1742 (2568)
Q Consensus 1670 e~l~~pli~~i~~~i~~~-L~~a~~~~~~Id~ViLVGGssr~-P~V~~~I~---~~f~--~~~v~~~~nP~eAVA~GAai 1742 (2568)
+++++.++.-+...|-.. .-.|.. ..+..|+++|.+-+. |..++.+. +++. ..++.+..+...+-|+||.+
T Consensus 261 ~Dia~sll~mv~~nIg~la~l~A~~--~~~~~I~f~G~~~~~~~~~~~~l~~a~~~~s~~~~~~~fl~h~gy~galGa~l 338 (341)
T PF03630_consen 261 EDIAKSLLNMVSNNIGQLAYLHAKI--HGVKRIVFGGSFIRNNPITMRTLSYAINFWSKGELKALFLRHEGYLGALGAFL 338 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH--HT--EEEEESGGGTSSCHHHHHHHHHHHHHTTTS-EEEEETTTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEeccccCCHHHHHHHHHHHHHhccCCceEEEecCCchhHHHHHHH
Confidence 455555554444433221 112211 237889999999875 77888888 6553 34566777889999999986
Q ss_pred H
Q psy7639 1743 Q 1743 (2568)
Q Consensus 1743 ~ 1743 (2568)
.
T Consensus 339 ~ 339 (341)
T PF03630_consen 339 K 339 (341)
T ss_dssp T
T ss_pred h
Confidence 4
No 241
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=37.76 E-value=6.4e+02 Score=31.10 Aligned_cols=40 Identities=15% Similarity=0.210 Sum_probs=30.4
Q ss_pred CcceEEEecCccChHHHHHHHHHhcCCCCCCCCCCcchhHHhhH
Q psy7639 2270 AIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGA 2313 (2568)
Q Consensus 2270 ~i~~vilvGGstriP~v~~~l~~~f~~~~~~~~~npdeava~GA 2313 (2568)
.+|.|| =|+|..|.+.+.++++||. .+ .-++|-+++|.=+
T Consensus 172 ~~d~lI--LGCTh~P~l~~~i~~~~~~-~v-~~IDp~~~la~~~ 211 (251)
T TIGR00067 172 LPDTVV--LGCTHFPLLKEEIEQYLPE-HV-RLVDSGVHTARRT 211 (251)
T ss_pred CCCEEE--ECcCChHHHHHHHHHHcCC-Cc-EEECCHHHHHHHH
Confidence 566654 4999999999999999952 22 4689988887654
No 242
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=37.29 E-value=3.3e+02 Score=35.00 Aligned_cols=184 Identities=18% Similarity=0.186 Sum_probs=99.3
Q ss_pred hhHHHhhcccccCcCCcceEEEEeeCCeeeEEEEEEE-cCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhC--C
Q psy7639 2115 PTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILSI-DEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYK--K 2191 (2568)
Q Consensus 2115 ptAaalaYg~~~~~~~~~~vlv~DlGggt~dvsil~~-~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~--~ 2191 (2568)
|-+-|.+-++... ...+.+|.++||= +-+.+ ..| . .|++ +|+--|=.=+|..+-.|.-+.|.+.-. .
T Consensus 148 PLvPA~H~Al~~~--~~~~r~vlNiGGI----aNlt~l~~~-~-~v~g--~DtGPgN~llD~wi~~~~g~~yD~~g~~A~ 217 (371)
T COG2377 148 PLVPAFHAALARA--PRERRAVLNIGGI----ANLTYLPPG-G-PVLG--FDTGPGNMLLDAWIQAHGGKPYDKDGAWAA 217 (371)
T ss_pred cchhhhhhHhhcC--CCCCeEEEeccce----EEEEecCCC-C-ceee--eecCCcchHHHHHHHHhhCCCcCcCcchhh
Confidence 3334444444333 3477899999993 33333 233 2 5554 666666666666555555544332111 0
Q ss_pred CCCCCHHHHHHHHHHHHHHhhccCCcceeEEEEecccCCcceEEeeCHHHHHH---HhHHHHHHhhH--HHHHHHHHcCC
Q psy7639 2192 DMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEE---LCSDLFRSTLQ--PVEKALQDAKL 2266 (2568)
Q Consensus 2192 d~~~~~~~~~~L~~~~e~~K~~LS~~~~~~~~i~~~~~~~d~~~~itr~~fe~---l~~~l~~~~~~--~~~~~l~~a~~ 2266 (2568)
.=.-+..-+++|+ .+..++... +...+-.+|...--+..++. +......+|+. +...+.+....
T Consensus 218 ~G~v~~~ll~~ll-----~~p~F~~~~------PkStgRe~F~~~wl~~~~~~~~~l~a~Dv~aTL~eltA~tIv~s~~~ 286 (371)
T COG2377 218 SGKVDEALLARLL-----AHPYFALPA------PKSTGRELFNLQWLEQHLDDTQLLNAEDVQATLVELTAATIVKSVAT 286 (371)
T ss_pred cCCcCHHHHHHHh-----hCCcccCCC------cccCCccccchhhHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 1112333444444 223332211 11111223333222223333 33333334333 22333444445
Q ss_pred CccCcceEEEecCccChHHHHHHHHHhcCCCCCC----CCCCcchhHHhhHHHHHHH
Q psy7639 2267 DKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLN----LSINPDEAVAYGAAVQAAI 2319 (2568)
Q Consensus 2267 ~~~~i~~vilvGGstriP~v~~~l~~~f~~~~~~----~~~npdeava~GAa~~aa~ 2319 (2568)
-..+-+..+++||..+=|.+.+.|...+++-.+. ..+++|..=|.+=|+.|..
T Consensus 287 ~~~~p~~l~vcGGG~~N~llm~rLa~l~~g~~V~~t~~~g~~gd~~EA~afA~LA~r 343 (371)
T COG2377 287 LQGDPRRLVVCGGGRRNPLLMARLAALLEGVEVATTDEAGLDGDAVEAEAFAWLAWR 343 (371)
T ss_pred ccCCCceeEeecCCccCHHHHHHHHHhcCCCeeeechhcCCCcchhhHHHHHHHHHH
Confidence 6677889999999999999999999999764443 3689998888888887764
No 243
>PRK03011 butyrate kinase; Provisional
Probab=36.29 E-value=68 Score=41.61 Aligned_cols=47 Identities=19% Similarity=0.181 Sum_probs=37.0
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHhC---CccccccCCchhHHHhhHHHH
Q psy7639 901 AIHDVVLVGGSTRIPKVQSLLQNFFC---GKSLNLSINPDEAVAYGAAVQ 947 (2568)
Q Consensus 901 ~I~~ViLvGGssriP~v~~~l~~~f~---~~~v~~~~npdeaVA~GAAl~ 947 (2568)
++|.|+|.||.+..+.+++.|.+.+. ...+....+-.+|.+.||+..
T Consensus 295 dpD~IVlgGGI~~~~~l~~~I~~~l~~~~pv~i~p~~~e~~A~a~GA~rv 344 (358)
T PRK03011 295 KVDAIVLTGGLAYSKRLVERIKERVSFIAPVIVYPGEDEMEALAEGALRV 344 (358)
T ss_pred CCCEEEEeCccccCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence 58999999999999999998887763 334455566678999998643
No 244
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X.
Probab=35.46 E-value=1.5e+02 Score=39.08 Aligned_cols=104 Identities=25% Similarity=0.361 Sum_probs=65.7
Q ss_pred EEEeeCCeeeEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhhcc
Q psy7639 2135 LIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTL 2214 (2568)
Q Consensus 2135 lv~DlGggt~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~f~~~~~~d~~~~~~~~~~L~~~~e~~K~~L 2214 (2568)
+.+|+|..|.-++++....| +++++.+..+ =+..||-|+ +.||.-+
T Consensus 4 iAvDiGTTti~~~L~dl~~G---~~l~~~s~~N-----------------pQ~~~GaDV------iSRI~~a-------- 49 (412)
T PF14574_consen 4 IAVDIGTTTIAAYLVDLETG---EVLATASFLN-----------------PQRAYGADV------ISRISYA-------- 49 (412)
T ss_dssp EEEEE-SSEEEEEEEETTT-----EEEEEEEE------------------GGGGT-SSH------HHHHHHH--------
T ss_pred EEEEcchhheeeEEEECCCC---CEEEeecccC-----------------CCCCcchHH------HHHHHHh--------
Confidence 67999999999999999988 4444433221 022344443 2333211
Q ss_pred CCcceeEEEEecccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhc
Q psy7639 2215 SSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFF 2294 (2568)
Q Consensus 2215 S~~~~~~~~i~~~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f 2294 (2568)
...+.+++|.+-+.+.+-+.+.++++++++++++|..++++|=++..-.+...=-+.+
T Consensus 50 ----------------------~~~~~~~~L~~~i~~~i~~li~~l~~~~gi~~~~I~~i~i~GNt~M~hLllGl~~~~L 107 (412)
T PF14574_consen 50 ----------------------LSPEGLEELQRLIRETINELIEELLEKAGISPEDIYEIVIVGNTTMLHLLLGLDPEGL 107 (412)
T ss_dssp ----------------------H-TTHHHHHHHHHHHHHHHHHHHHHHHHT--GGGEEEEEEEE-HHHHHHHHT---GGG
T ss_pred ----------------------cCCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeEEEEEEecHHHHHHHcCCChHHh
Confidence 1224467777888888888999999999999999999999999988777665444444
No 245
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=35.28 E-value=1.2e+02 Score=39.37 Aligned_cols=67 Identities=19% Similarity=0.258 Sum_probs=43.3
Q ss_pred hhhhhHHHHHHHHHHcCCCCCCCCeEEEcCCccchHHHHHHHHHHhCCCcccc----cCCchhHHHhhHHHHHHH
Q psy7639 307 LFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNL----SINPDEAVAYGAAVQAAI 377 (2568)
Q Consensus 307 l~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~sriP~v~~~l~~~f~~~~v~~----~~npdeaVA~GAa~~aa~ 377 (2568)
+.+=+...|.+++.... ...+.|+++||+++-|++.++|++.++ .++.. .+++|--=|..-|++|..
T Consensus 268 lt~~TA~sI~~~~~~~~---~~~~~vlv~GGGa~N~~Lm~~L~~~l~-~~v~~~~~~G~~~da~EA~aFA~La~~ 338 (365)
T PRK09585 268 LTELTAASIARAVRRLP---PGPDELLVCGGGARNPTLMERLAALLP-TEVATTDALGIDGDAKEALAFAWLAVR 338 (365)
T ss_pred HHHHHHHHHHHHHHhcc---CCCCEEEEECCCcchHHHHHHHHHhcC-CcccCHHHcCCChhHHHHHHHHHHHHH
Confidence 33334445556665433 224689999999999999999999985 33322 245555455556777653
No 246
>PLN02920 pantothenate kinase 1
Probab=35.23 E-value=3.9e+02 Score=34.91 Aligned_cols=49 Identities=10% Similarity=-0.088 Sum_probs=37.3
Q ss_pred CCCCeEEEcCCccchH-HHHHHHHHHh-----CCCcccccCCchhHHHhhHHHHH
Q psy7639 327 SAIHDVVLVGGSTRIP-KVQSLLQNFF-----CGKSLNLSINPDEAVAYGAAVQA 375 (2568)
Q Consensus 327 ~~i~~ViLvGG~sriP-~v~~~l~~~f-----~~~~v~~~~npdeaVA~GAa~~a 375 (2568)
.+++.|+++|...|.+ ..++.|.-.+ +..+....-+....-|.||.+..
T Consensus 296 ~~ik~Ivf~G~fir~~~~tm~~ls~a~~fwS~g~~ka~FLrHeGYlGAlGAfl~~ 350 (398)
T PLN02920 296 FGLKRIFFGGFFIRGHSYTMDTISVAVHFWSKGEAKAMFLRHEGFLGALGAFMSY 350 (398)
T ss_pred cCCCEEEEEeecccCcHHHHHHHHHHHHHhccCceeEEEecCcchhHHHHHHHhc
Confidence 4689999999999998 6666454332 44566667789999999998754
No 247
>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein. This protein family was identified, by the method of partial phylogenetic profiling, as related to the use of tetrahydromethanopterin (H4MPT) as a C-1 carrier. Characteristic markers of the H4MPT-linked C1 transfer pathway include formylmethanofuran dehydrogenase subunits, methenyltetrahydromethanopterin cyclohydrolase, etc. Tetrahydromethanopterin, a tetrahydrofolate analog, occurs in methanogenic archaea, bacterial methanotrophs, planctomycetes, and a few other lineages.
Probab=35.23 E-value=24 Score=44.59 Aligned_cols=51 Identities=14% Similarity=0.240 Sum_probs=31.6
Q ss_pred eCHHHHHHHhHHHHHHhhH----HHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcC
Q psy7639 2237 ISRARFEELCSDLFRSTLQ----PVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFC 2295 (2568)
Q Consensus 2237 itr~~fe~l~~~l~~~~~~----~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~ 2295 (2568)
++-++.++++..+++.... .+++++.+.++++ +..||.. |++-..+.+..|
T Consensus 245 ~~~~~~~~~A~~i~~~~~~~m~~ai~~v~~~~G~Dp------v~~gGaG--~~~a~~lA~~lg 299 (318)
T TIGR03123 245 LGEEDVRNLAKYYYEAQLEQLTEAIEEVLERYGLKT------VVAAGAG--EFLAKEAAARLG 299 (318)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------eEEecch--HHHHHHHHHHcC
Confidence 4445677777777765544 4555555556655 5666666 777777776663
No 248
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=35.18 E-value=2.6e+02 Score=35.52 Aligned_cols=26 Identities=23% Similarity=0.531 Sum_probs=22.8
Q ss_pred cCcceEEEecCccChHHHHHHHHHhc
Q psy7639 2269 SAIHDVVLVGGSTRIPKVQSLLQNFF 2294 (2568)
Q Consensus 2269 ~~i~~vilvGGstriP~v~~~l~~~f 2294 (2568)
..++.|+|.||...=..+++.|.+.+
T Consensus 257 ~g~~~vvlsGGVa~N~~L~~~l~~~~ 282 (305)
T TIGR00329 257 TGPKELVLVGGVSANKRLREMLETLC 282 (305)
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHHH
Confidence 35788999999999999999988876
No 249
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=34.54 E-value=9.1e+02 Score=30.95 Aligned_cols=42 Identities=19% Similarity=0.321 Sum_probs=31.4
Q ss_pred CCeEEEcCCccchHHHHHHHHHHhC--CCcccccC---CchhHHHhh
Q psy7639 329 IHDVVLVGGSTRIPKVQSLLQNFFC--GKSLNLSI---NPDEAVAYG 370 (2568)
Q Consensus 329 i~~ViLvGG~sriP~v~~~l~~~f~--~~~v~~~~---npdeaVA~G 370 (2568)
++.|+|.||...-.++++.|.+.+. +.++..+. --|.+++.|
T Consensus 243 ~~~lvlsGGVa~N~~L~~~l~~~l~~~g~~v~~~~~~p~~D~Gi~Ig 289 (322)
T TIGR03722 243 KKEVLLVGGVAANRRLREMLELMAEDRGAKFYVPPPEYAGDNGAMIA 289 (322)
T ss_pred CCeEEEeccHHHHHHHHHHHHHHHHHCCCEEEcCCCCCCchHHHHHH
Confidence 6789999999999999999999652 33443332 237778887
No 250
>PRK07058 acetate kinase; Provisional
Probab=34.11 E-value=3.6e+02 Score=35.30 Aligned_cols=46 Identities=9% Similarity=0.131 Sum_probs=33.8
Q ss_pred HHHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCCC-CcHHHHHHHHHHhC
Q psy7639 877 CSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGST-RIPKVQSLLQNFFC 926 (2568)
Q Consensus 877 ~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGss-riP~v~~~l~~~f~ 926 (2568)
++-++.++.+.|-...... ..+|.|+++||-+ ..+.|++.+.+.+.
T Consensus 298 ~d~f~yri~k~IGa~~a~L----g~vDaiVfTGGIgEns~~vr~~i~~~l~ 344 (396)
T PRK07058 298 LDLFALRIAGEIARLAATL----GGLDAVVFTAGIGEHQPAIRAAVCERLA 344 (396)
T ss_pred HHHHHHHHHHHHHHHHHHh----CCCCEEEECCccccCcHHHHHHHHhhhh
Confidence 3444555555555554443 3699999999999 99999999998773
No 251
>TIGR00143 hypF [NiFe] hydrogenase maturation protein HypF. A previously described regulatory effect of HypF mutatation is attributable to loss of activity of a regulatory hydrogenase. A zinc finger-like region CXXCX(18)CXXCX(24)CXXCX(18)CXXC region further supported the regulatory hypothesis. However, more recent work (PUBMED:11375153) shows the direct effect is on the activity of expressed hydrogenases with nickel/iron centers, rather than on expression.
Probab=33.75 E-value=47 Score=46.92 Aligned_cols=64 Identities=19% Similarity=0.231 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCccccEEEEecCccCChhHHHHHHhhhcC--CcccccCC---chhhhhccHHHHH
Q psy7639 1676 LFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCG--KSLNLSIN---PDEAVAYGAAVQA 1744 (2568)
Q Consensus 1676 li~~i~~~i~~~L~~a~~~~~~Id~ViLVGGssr~P~V~~~I~~~f~~--~~v~~~~n---P~eAVA~GAai~a 1744 (2568)
+.+.+.+.+.++....+ ++.|+|+||..+..++++.+.+.+.. -.+..+.. -|.++++|.|+.|
T Consensus 642 la~~L~~~a~~~~~~~g-----~~~VvLSGGVfqN~~L~~~L~~~L~~~g~~v~~p~~~p~nDgGislGQa~~a 710 (711)
T TIGR00143 642 VASGLVEIATAIAVPFG-----IHKIVISGGVFYNRLLLERLAKYLKGLGFQFLFHRHLPPGDGGISLGQAVAA 710 (711)
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEeccHHHHHHHHHHHHHHHHhCCCEEEccCCCCCCHHHHHHHHHHHh
Confidence 33445555555555433 56799999999999999999988742 23333322 2899999998776
No 252
>PRK03011 butyrate kinase; Provisional
Probab=33.64 E-value=60 Score=42.04 Aligned_cols=46 Identities=20% Similarity=0.195 Sum_probs=35.8
Q ss_pred CCCeEEEcCCccchHHHHHHHHHHhC---CCcccccCCchhHHHhhHHH
Q psy7639 328 AIHDVVLVGGSTRIPKVQSLLQNFFC---GKSLNLSINPDEAVAYGAAV 373 (2568)
Q Consensus 328 ~i~~ViLvGG~sriP~v~~~l~~~f~---~~~v~~~~npdeaVA~GAa~ 373 (2568)
+++.|+|.||.+..+.+++.|.+.+. ...+....+-.+|.+.||+.
T Consensus 295 dpD~IVlgGGI~~~~~l~~~I~~~l~~~~pv~i~p~~~e~~A~a~GA~r 343 (358)
T PRK03011 295 KVDAIVLTGGLAYSKRLVERIKERVSFIAPVIVYPGEDEMEALAEGALR 343 (358)
T ss_pred CCCEEEEeCccccCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence 68999999999999999998888773 23334445667899999864
No 253
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=33.29 E-value=1e+03 Score=32.88 Aligned_cols=79 Identities=15% Similarity=0.248 Sum_probs=48.5
Q ss_pred HHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEecCccChHHHHHHHHHhcCC--CCC---CCCCCcchhHHhhHHHHH
Q psy7639 2243 EELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCG--KSL---NLSINPDEAVAYGAAVQA 2317 (2568)
Q Consensus 2243 e~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvGGstriP~v~~~l~~~f~~--~~~---~~~~npdeava~GAa~~a 2317 (2568)
+.++..+.+.+.+.+.+.++.+. ....++.|+|.||...=..+++.|.+.+.. -++ .....-|.++++|+|...
T Consensus 219 ~~iA~~~q~~l~~~l~~~~~~~~-~~~g~~~lvlsGGVa~N~~l~~~l~~~~~~~~~~v~~~~~~~~~D~g~~ia~a~~~ 297 (535)
T PRK09605 219 EDVCYSLQETAFAMLTEVTERAL-AHTGKDEVLLVGGVAANNRLREMLKEMCEERGADFYVPEPRFCGDNGAMIAWLGLL 297 (535)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHhCCCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECCCCccccchHHHHHHHHHH
Confidence 44554444444443333333321 112467899999999999999998866521 121 222356899999999876
Q ss_pred HHhhC
Q psy7639 2318 AILSG 2322 (2568)
Q Consensus 2318 a~ls~ 2322 (2568)
...++
T Consensus 298 ~~~~g 302 (535)
T PRK09605 298 MYKAG 302 (535)
T ss_pred HHHcC
Confidence 66655
No 254
>cd02640 R3H_NRF R3H domain of the NF-kappaB-repression factor (NRF). NRF is a nuclear inhibitor of NF-kappaB proteins that can silence the IFNbeta promoter via binding to a negative regulatory element (NRE). Beside R3H NRF also contains a G-patch domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=33.15 E-value=1.1e+02 Score=29.03 Aligned_cols=43 Identities=12% Similarity=0.164 Sum_probs=35.0
Q ss_pred HHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCcee
Q psy7639 2066 MKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVM 2109 (2568)
Q Consensus 2066 lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl 2109 (2568)
+++..+.|.... ....++.|+.|+..+|..+-+.|+..||+-.
T Consensus 4 ~~~~i~~F~~s~-~~~~l~f~p~lt~~eR~~vH~~a~~~gL~s~ 46 (60)
T cd02640 4 YRQIIQNYAHSD-DIRDMVFSPEFSKEERALIHQIAQKYGLKSR 46 (60)
T ss_pred HHHHHHHHHcCC-ccceEEcCCCCCHHHHHHHHHHHHHcCCcee
Confidence 345556666544 4678999999999999999999999999864
No 255
>COG3894 Uncharacterized metal-binding protein [General function prediction only]
Probab=32.31 E-value=93 Score=40.75 Aligned_cols=46 Identities=22% Similarity=0.324 Sum_probs=38.7
Q ss_pred ceEEEEeeCCeeeEEEEEEEcCCcEEEEEEeccCCCcchhHHHHHH
Q psy7639 2132 RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRL 2177 (2568)
Q Consensus 2132 ~~vlv~DlGggt~dvsil~~~~g~~~~v~~~~gd~~lGG~d~D~~l 2177 (2568)
.+=+.+|+|.++|-+-++.+..|.+.....|....--||+++|.+.
T Consensus 164 ~YGvAvDlGTS~i~aqlVDL~sgevv~t~~T~n~ql~~Ge~m~sr~ 209 (614)
T COG3894 164 AYGVAVDLGTSGIRAQLVDLKSGEVVATVITSNPQLPGGEVMDSRD 209 (614)
T ss_pred eeeeEEecccceeeeEEEeccCCcEEEeeeccCCCCCCchhhHHHH
Confidence 4447899999999999999999966666777777888999999864
No 256
>PLN02920 pantothenate kinase 1
Probab=31.98 E-value=2.1e+02 Score=37.27 Aligned_cols=73 Identities=14% Similarity=0.086 Sum_probs=45.9
Q ss_pred HHHHhHHHHHHHHHHHH-HHHHcCCCCccccEEEEecCccCCh-hHHHHHHh---hh--cCCcccccCCchhhhhccHHH
Q psy7639 1670 EELCSDLFRSTLQPVEK-ALQDAKLDKSAIHDVVLVGGSTRIP-KVQSLLQN---FF--CGKSLNLSINPDEAVAYGAAV 1742 (2568)
Q Consensus 1670 e~l~~pli~~i~~~i~~-~L~~a~~~~~~Id~ViLVGGssr~P-~V~~~I~~---~f--~~~~v~~~~nP~eAVA~GAai 1742 (2568)
|++++.++.-+...|-. ++-.|.. ..++.|+++|++.+.+ ..++.|.. ++ ++.+..+..+....-|+||++
T Consensus 271 eDia~SLL~mVs~nIgqiA~L~A~~--~~ik~Ivf~G~fir~~~~tm~~ls~a~~fwS~g~~ka~FLrHeGYlGAlGAfl 348 (398)
T PLN02920 271 EDVARSLLRMISNNIGQISYLNALR--FGLKRIFFGGFFIRGHSYTMDTISVAVHFWSKGEAKAMFLRHEGFLGALGAFM 348 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEeecccCcHHHHHHHHHHHHHhccCceeEEEecCcchhHHHHHHH
Confidence 45555555444444322 2223322 3488899999999998 77774433 33 344666677888899999986
Q ss_pred HH
Q psy7639 1743 QA 1744 (2568)
Q Consensus 1743 ~a 1744 (2568)
..
T Consensus 349 ~~ 350 (398)
T PLN02920 349 SY 350 (398)
T ss_pred hc
Confidence 54
No 257
>PF02543 CmcH_NodU: Carbamoyltransferase; InterPro: IPR003696 The putative O-carbamoyltransferases (O-Cases) encoded by the nodU genes of Rhizobium fredii and Bradyrhizobium japonicum are involved in the synthesis of nodulation factors []. The cmcH genes of Nocardia lactamdurans and Streptomyces clavuligerus encode a functional 3'-hydroxymethylcephem O-carbamoyltransferase 2.1.3.7 from EC for cephamycin biosynthesis that shows significant similarity to the O-carbamoyltransferases [].; GO: 0003824 catalytic activity, 0009058 biosynthetic process; PDB: 3VES_A 3VER_A 3VEN_A 3VF2_A 3VEX_A 3VEW_A 3VET_A 3VEO_A 3VEZ_A 3VF4_A.
Probab=31.55 E-value=1.1e+02 Score=39.88 Aligned_cols=82 Identities=20% Similarity=0.166 Sum_probs=56.2
Q ss_pred ecchHhHHHHHHHHHHhHH-HHHHHHHHHccCCccCcCe-EEEEcCCCCcHHHHHHHHHHhCCccccc-cCCchhHHHhh
Q psy7639 867 KISRARFEELCSDLFRSTL-QPVEKALQDAKLDKSAIHD-VVLVGGSTRIPKVQSLLQNFFCGKSLNL-SINPDEAVAYG 943 (2568)
Q Consensus 867 ~itr~efe~l~~~l~~~i~-~~i~~~L~~a~~~~~~I~~-ViLvGGssriP~v~~~l~~~f~~~~v~~-~~npdeaVA~G 943 (2568)
.-.+.++-..++..+++++ ..++.++++.+ ++. +.|.||....-..-..|.+..+-..+.. +.-.|.-+|+|
T Consensus 132 ~~~~~dlAa~~Q~~~E~~v~~~~~~~~~~~g-----~~~~L~laGGvaLN~~~N~~l~~~~~~~~v~V~Pa~gD~G~aiG 206 (360)
T PF02543_consen 132 TQRHADLAASAQKVLEEIVLHLVRHLLERTG-----IDNNLCLAGGVALNCKANGRLLEEPGFDNVFVPPAAGDAGLAIG 206 (360)
T ss_dssp ESS-HHHHHHHHHHHHHHHHHHHHHHHHHHT-------SEEEEESGGGG-HHHHHHHHTSTT-SEEE--TTTSGGGHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCeEEEechHHHHHHHHHHHHhcCCCCeEEECCCCCCcchHHH
Confidence 3456677777777776664 45566666665 556 9999999999999999988754445544 44558999999
Q ss_pred HHHHHHHHcC
Q psy7639 944 AAVQAAILSG 953 (2568)
Q Consensus 944 AAl~aa~ls~ 953 (2568)
||+++....+
T Consensus 207 aA~~~~~~~~ 216 (360)
T PF02543_consen 207 AALYAWHELG 216 (360)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhc
Confidence 9999986544
No 258
>COG2192 Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones]
Probab=31.17 E-value=1e+03 Score=32.52 Aligned_cols=82 Identities=17% Similarity=0.167 Sum_probs=54.2
Q ss_pred cchHhHHHHHHHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCCCCcHHHH-HHHHHHhCCccccccCCchhHHHhhHHH
Q psy7639 868 ISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQ-SLLQNFFCGKSLNLSINPDEAVAYGAAV 946 (2568)
Q Consensus 868 itr~efe~l~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGssriP~v~-~~l~~~f~~~~v~~~~npdeaVA~GAAl 946 (2568)
..-.++-..++..+++++-.+-.-+.+.. ..+.+.+.||....-..- +++.+-+...-...+--.|.-.|.|||+
T Consensus 256 ~~~~diAasaQ~~lE~l~l~~~~~~~~~~----g~~~L~~AGGVAlNv~~N~~~l~~~~f~dlfV~Pa~gD~G~AvGAAl 331 (555)
T COG2192 256 ERAADIAASAQAYLEELVLEMLRYLREET----GEDNLALAGGVALNVKANGKLLRRGLFEDLFVQPAMGDAGLAVGAAL 331 (555)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHh----CccceEEccceeeeeeehHhHhhcccCceeEecCCCCCcchHHHHHH
Confidence 34445666667777776665555555432 167799999998887777 6666555332223344568899999999
Q ss_pred HHHHHcC
Q psy7639 947 QAAILSG 953 (2568)
Q Consensus 947 ~aa~ls~ 953 (2568)
++...-+
T Consensus 332 ~~~~~~~ 338 (555)
T COG2192 332 AVKRELG 338 (555)
T ss_pred HHHHHhc
Confidence 9876544
No 259
>PF14628 DUF4454: Domain of unknown function (DUF4454)
Probab=30.64 E-value=1.1e+02 Score=35.17 Aligned_cols=83 Identities=25% Similarity=0.295 Sum_probs=50.3
Q ss_pred ccEEEEccCCCCHHHHHHHHHHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCee------eE---EEEE
Q psy7639 2079 RDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGT------FD---VSIL 2149 (2568)
Q Consensus 2079 ~~aVItVPa~f~~~qR~a~~~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt------~d---vsil 2149 (2568)
-.--|+||+-.+..|=++++++ |-+|.-.+||-|--+-.-.+.........+|+||.|--. += ..-.
T Consensus 52 ~~GtIsvP~~iT~eQ~~~~l~~----G~e~~vv~nelTgE~~~l~~~~~~~~~~~~l~Y~~g~~p~~~g~etg~y~~lt~ 127 (216)
T PF14628_consen 52 AEGTISVPASITPEQYEAVLKE----GKEVEVVLNELTGETRILKLDPGTDYGDYVLFYDSGEEPKTSGEETGHYVFLTY 127 (216)
T ss_pred ecceEEeeeecCHHHHHHHHhC----CceEEEEeccccCceeeeEeCCCCCCcceEEEEecCCCcCCCCccccceeeEee
Confidence 3457999999999999986554 677777788876433322222222223457788877533 00 0112
Q ss_pred EEcCCcEEEEEEeccCC
Q psy7639 2150 SIDEGALFEVRSTAGDT 2166 (2568)
Q Consensus 2150 ~~~~g~~~~v~~~~gd~ 2166 (2568)
...+| .++...+++|+
T Consensus 128 d~~Sg-tY~lW~~S~DT 143 (216)
T PF14628_consen 128 DPYSG-TYSLWQTSDDT 143 (216)
T ss_pred cCCCC-cEEeeecccch
Confidence 23456 67777777776
No 260
>cd06007 R3H_DEXH_helicase R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=30.27 E-value=1.2e+02 Score=28.66 Aligned_cols=38 Identities=13% Similarity=0.230 Sum_probs=31.2
Q ss_pred HHHHHhCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcE
Q psy7639 127 TAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNV 166 (2568)
Q Consensus 127 ~ae~~l~~~~~~~VITVPa~f~~~qr~al~~Aa~~AGl~~ 166 (2568)
..+.+.... ...++.|+.++..+|..+.+.|+..||..
T Consensus 7 ~i~~F~~~~--~~~l~Fpp~ls~~eR~~vH~~a~~~gL~s 44 (59)
T cd06007 7 ALEDFRASD--NEEYEFPSSLTNHERAVIHRLCRKLGLKS 44 (59)
T ss_pred HHHHHHcCc--ccEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 344455444 67899999999999999999999999975
No 261
>TIGR00143 hypF [NiFe] hydrogenase maturation protein HypF. A previously described regulatory effect of HypF mutatation is attributable to loss of activity of a regulatory hydrogenase. A zinc finger-like region CXXCX(18)CXXCX(24)CXXCX(18)CXXC region further supported the regulatory hypothesis. However, more recent work (PUBMED:11375153) shows the direct effect is on the activity of expressed hydrogenases with nickel/iron centers, rather than on expression.
Probab=29.94 E-value=71 Score=45.21 Aligned_cols=61 Identities=21% Similarity=0.254 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHccCCccCcCeEEEEcCCCCcHHHHHHHHHHhCC--cccccc---CCchhHHHhhHHHHHH
Q psy7639 884 TLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCG--KSLNLS---INPDEAVAYGAAVQAA 949 (2568)
Q Consensus 884 i~~~i~~~L~~a~~~~~~I~~ViLvGGssriP~v~~~l~~~f~~--~~v~~~---~npdeaVA~GAAl~aa 949 (2568)
+.+.++++.... .++.|+|+||.....++++.|.+.+.. ..+..+ .-.|.+++.|.|+.|+
T Consensus 646 L~~~a~~~~~~~-----g~~~VvLSGGVfqN~~L~~~L~~~L~~~g~~v~~p~~~p~nDgGislGQa~~a~ 711 (711)
T TIGR00143 646 LVEIATAIAVPF-----GIHKIVISGGVFYNRLLLERLAKYLKGLGFQFLFHRHLPPGDGGISLGQAVAAA 711 (711)
T ss_pred HHHHHHHHHHHc-----CCCeEEEeccHHHHHHHHHHHHHHHHhCCCEEEccCCCCCCHHHHHHHHHHHhC
Confidence 444444444432 477899999999999999999988742 233332 2458999999998874
No 262
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=29.36 E-value=60 Score=34.94 Aligned_cols=45 Identities=18% Similarity=0.262 Sum_probs=32.2
Q ss_pred hhHHHHHHHHHcCCCccCcceEEEecCccCh--HHHHHHHHHhcCCC
Q psy7639 2253 TLQPVEKALQDAKLDKSAIHDVVLVGGSTRI--PKVQSLLQNFFCGK 2297 (2568)
Q Consensus 2253 ~~~~~~~~l~~a~~~~~~i~~vilvGGstri--P~v~~~l~~~f~~~ 2297 (2568)
..+.++++|++++++++|||.|...|-+|.. +.=.+.|.+.|+..
T Consensus 27 ~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~ 73 (119)
T PF02801_consen 27 LARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDS 73 (119)
T ss_dssp HHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhccc
Confidence 3556999999999999999999999988886 44455788888653
No 263
>PRK09698 D-allose kinase; Provisional
Probab=29.28 E-value=1.2e+03 Score=29.18 Aligned_cols=45 Identities=18% Similarity=0.075 Sum_probs=29.2
Q ss_pred HcCCceEEEEechhHHHHHhhccccccCcceEEEEEeCCcceEEEEEE
Q psy7639 1530 IAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILS 1577 (2568)
Q Consensus 1530 ~AGL~v~~li~EPtAAal~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~ 1577 (2568)
..|+++ .+.|.-.|||++-..... ....+++.+.+|.| .-.+++.
T Consensus 103 ~~~~pv-~v~NDa~aaa~~E~~~~~-~~~~~~~~v~lgtG-IG~giv~ 147 (302)
T PRK09698 103 TLNCPV-FFSRDVNLQLLWDVKENN-LTQQLVLGAYLGTG-MGFAVWM 147 (302)
T ss_pred HhCCCE-EEcchHhHHHHHHHHhcC-CCCceEEEEEecCc-eEEEEEE
Confidence 357764 699999999886433221 23457888888866 4445553
No 264
>PF00349 Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P). The enzyme can catalyse this reaction on glucose, fructose, sorbitol and glucosamine, and as such is the first step in a number of metabolic pathways []. The addition of a phosphate group to the sugar acts to trap it in a cell, since the negatively charged phosphate cannot easily traverse the plasma membrane. The enzyme is widely distributed in eukaryotes. There are three isozymes of hexokinase in yeast (PI, PII and glucokinase): isozymes PI and PII phosphorylate both aldo- and keto-sugars; glucokinase is specific for aldo-hexoses. All three isozymes contain two domains []. Structural studies of yeast hexokinase reveal a well-defined catalytic pocket that binds ATP and hexose, allowing easy transfer of the phosphate from ATP to the sugar []. Vertebrates contain four hexokinase isozymes, designated I to IV, where types I to III contain a duplication of the two-domain yeast-type hexokinases. Both the N- and C-terminal halves bind hexose and H6P, though in types I an III only the C-terminal half supports catalysis, while both halves support catalysis in type II. The N-terminal half is the regulatory region. Type IV hexokinase is similar to the yeast enzyme in containing only the two domains, and is sometimes incorrectly referred to as glucokinase. The different vertebrate isozymes differ in their catalysis, localisation and regulation, thereby contributing to the different patterns of glucose metabolism in different tissues []. Whereas types I to III can phosphorylate a variety of hexose sugars and are inhibited by glucose-6-phosphate (G6P), type IV is specific for glucose and shows no G6P inhibition. Type I enzyme may have a catabolic function, producing H6P for energy production in glycolysis; it is bound to the mitochondrial membrane, which enables the coordination of glycolysis with the TCA cycle. Types II and III enzyme may have anabolic functions, providing H6P for glycogen or lipid synthesis. Type IV enzyme is found in the liver and pancreatic beta-cells, where it is controlled by insulin (activation) and glucagon (inhibition). In pancreatic beta-cells, type IV enzyme acts as a glucose sensor to modify insulin secretion. Mutations in type IV hexokinase have been associated with diabetes mellitus. Hexokinase (2.7.1.1 from EC), a fructose and glucose phosphorylating enzyme, contains two structurally similar domains represented by this family and PF03727 from PFAM. Some hexokinases have two copies of each of these domains. This entry represents the N-terminal domain.; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 3O1W_A 3O6W_A 3O4W_B 3O08_B 3O80_A 3O5B_A 3O8M_A 3O1B_A 1BG3_A 4DHY_A ....
Probab=28.77 E-value=1.3e+02 Score=35.94 Aligned_cols=55 Identities=18% Similarity=0.382 Sum_probs=35.7
Q ss_pred CCceEEEEEeCCceeEEEEEEEcCCcEEEEEeeccCC---CCccchHHHHHHHHHHHHHH
Q psy7639 761 GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDT---HLGGEDFDNRLVSHLAEEFK 817 (2568)
Q Consensus 761 ~~~~vlV~D~GgGT~Dvsv~~~~~~~~~~v~~~~gd~---~lGG~~~D~~l~~~l~~~~~ 817 (2568)
..+.+|++|+||.++-|+++++..+..+++....... ..-|.. +.|.+|+++.+.
T Consensus 61 E~G~~LalDlGGTnlRv~~V~L~g~~~~~~~~~~~~ip~~~~~~~~--~~lFd~ia~~i~ 118 (206)
T PF00349_consen 61 EKGDFLALDLGGTNLRVALVELSGNGKVEIEQEKYKIPEELMNGSG--EELFDFIADCIA 118 (206)
T ss_dssp TEEEEEEEEESSSSEEEEEEEEESSSEEEEEEEEEE--HHHHTSBH--HHHHHHHHHHHH
T ss_pred CCceEEEEeecCcEEEEEEEEEcCCCCceeeeccccCChHHhcCCc--ccHHHHHHHHHH
Confidence 4467999999999999999999876555544322211 111222 566777776654
No 265
>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein. This protein family was identified, by the method of partial phylogenetic profiling, as related to the use of tetrahydromethanopterin (H4MPT) as a C-1 carrier. Characteristic markers of the H4MPT-linked C1 transfer pathway include formylmethanofuran dehydrogenase subunits, methenyltetrahydromethanopterin cyclohydrolase, etc. Tetrahydromethanopterin, a tetrahydrofolate analog, occurs in methanogenic archaea, bacterial methanotrophs, planctomycetes, and a few other lineages.
Probab=27.89 E-value=51 Score=41.75 Aligned_cols=19 Identities=26% Similarity=0.408 Sum_probs=17.3
Q ss_pred ceEEEEEeCCceeEEEEEE
Q psy7639 763 RNVLIFDLGGGTFDVSILS 781 (2568)
Q Consensus 763 ~~vlV~D~GgGT~Dvsv~~ 781 (2568)
.+++++||||.|+|++++.
T Consensus 128 ~~~I~~DmGGTTtDi~~i~ 146 (318)
T TIGR03123 128 PECLFVDMGSTTTDIIPII 146 (318)
T ss_pred CCEEEEEcCccceeeEEec
Confidence 4599999999999999986
No 266
>COG4012 Uncharacterized protein conserved in archaea [Function unknown]
Probab=27.76 E-value=1.6e+02 Score=35.45 Aligned_cols=58 Identities=21% Similarity=0.357 Sum_probs=37.7
Q ss_pred EecCCCCHHHHHHHHHHHHHc---CCcEEEEecchhHHHHhhccccccCCCceEEEEEeCCcceEEEEee
Q psy7639 142 TVPAYFNDAQRQATKDAGAIA---GLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILS 208 (2568)
Q Consensus 142 TVPa~f~~~qr~al~~Aa~~A---Gl~~~~li~Ep~AAAl~y~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 208 (2568)
-+|.+|+- |++|+..| |-. ..+++.-.||+....++. .....||+|+|-|++..+++.
T Consensus 185 eiPe~FtR-----Mraaa~sal~~~t~-av~mDskfaav~gal~dp---aa~palvVd~GngHttaalvd 245 (342)
T COG4012 185 EIPESFTR-----MRAAAMSALSAGTD-AVAMDSKFAAVMGALVDP---AADPALVVDYGNGHTTAALVD 245 (342)
T ss_pred cCchhHHH-----HHHHHHHHHhcCce-EEEEcchhHhhhhcccCc---ccCceEEEEccCCceEEEEec
Confidence 36777763 44444333 433 456666666666565553 234799999999999999874
No 267
>COG5026 Hexokinase [Carbohydrate transport and metabolism]
Probab=27.54 E-value=2e+02 Score=37.60 Aligned_cols=28 Identities=32% Similarity=0.686 Sum_probs=23.7
Q ss_pred CcceEEEEeeCCeeeEEEEEEEc-CCcEEE
Q psy7639 2130 GERNVLIFDLGGGTFDVSILSID-EGALFE 2158 (2568)
Q Consensus 2130 ~~~~vlv~DlGggt~dvsil~~~-~g~~~~ 2158 (2568)
..+.+|+.|+||..|-|+++.+. +| .|.
T Consensus 73 e~g~~LaiD~GGTnlRvc~V~l~g~g-t~~ 101 (466)
T COG5026 73 ESGSVLAIDLGGTNLRVCLVVLGGDG-TFD 101 (466)
T ss_pred CCCCEEEEecCCceEEEEEEEeCCCC-Ccc
Confidence 45789999999999999999997 55 444
No 268
>cd02646 R3H_G-patch R3H domain of a group of fungal and plant proteins with unknown function, who also contain a G-patch domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the R3H domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=26.95 E-value=1.2e+02 Score=28.36 Aligned_cols=42 Identities=19% Similarity=0.332 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCce
Q psy7639 2064 TKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNV 2108 (2568)
Q Consensus 2064 ~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~v 2108 (2568)
+.+++.-+.++-.+ .-.++.|+ ++..+|+.+.+-|...||.-
T Consensus 2 ~~i~~~i~~F~~~~--~~~~~fpp-m~~~~R~~vH~lA~~~~L~S 43 (58)
T cd02646 2 EDIKDEIEAFLLDS--RDSLSFPP-MDKHGRKTIHKLANCYNLKS 43 (58)
T ss_pred hHHHHHHHHHHhCC--CceEecCC-CCHHHHHHHHHHHHHcCCcc
Confidence 45666667777555 56779999 99999999999999888765
No 269
>KOG1939|consensus
Probab=25.83 E-value=42 Score=45.47 Aligned_cols=38 Identities=26% Similarity=0.499 Sum_probs=27.5
Q ss_pred EEechhhHHHhhcccccCcC-CcceEEEEeeCCeeeEEE
Q psy7639 2110 RIVNEPTAAALAYGLDKNLK-GERNVLIFDLGGGTFDVS 2147 (2568)
Q Consensus 2110 ~linEptAaalaYg~~~~~~-~~~~vlv~DlGggt~dvs 2147 (2568)
.|++-|.+-.+.|+...... .+..++-|||||.++|||
T Consensus 282 aIlSGPAgGvVG~a~T~~~~~~~~P~IGFDMGGTSTDVs 320 (1247)
T KOG1939|consen 282 AILSGPAGGVVGYASTSYDAEDKKPLIGFDMGGTSTDVS 320 (1247)
T ss_pred hhhcCCCcceeeeeeeccccccCCceeeecCCCCcccee
Confidence 35677777777777653222 345688999999999998
No 270
>PRK07058 acetate kinase; Provisional
Probab=25.40 E-value=5.1e+02 Score=33.98 Aligned_cols=42 Identities=10% Similarity=0.167 Sum_probs=30.3
Q ss_pred hhhhHHHHHHHHHHcCCCCCCCCeEEEcCCcc-chHHHHHHHHHHhC
Q psy7639 308 FRSTLQPVEKALQDAKLDKSAIHDVVLVGGST-RIPKVQSLLQNFFC 353 (2568)
Q Consensus 308 ~~~i~~~i~~~l~~a~~~~~~i~~ViLvGG~s-riP~v~~~l~~~f~ 353 (2568)
+.++...|-...... ..+|.|+++||-+ ..+.|++.+.+.+.
T Consensus 302 ~yri~k~IGa~~a~L----g~vDaiVfTGGIgEns~~vr~~i~~~l~ 344 (396)
T PRK07058 302 ALRIAGEIARLAATL----GGLDAVVFTAGIGEHQPAIRAAVCERLA 344 (396)
T ss_pred HHHHHHHHHHHHHHh----CCCCEEEECCccccCcHHHHHHHHhhhh
Confidence 344444444433333 3699999999999 99999999998773
No 271
>COG2441 Predicted butyrate kinase [Energy production and conversion]
Probab=24.03 E-value=3.6e+02 Score=32.95 Aligned_cols=152 Identities=24% Similarity=0.366 Sum_probs=79.9
Q ss_pred ceEEEEEeCCcceEEEEEEecCCcEEEEEEecCCC----CCChhHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHHH
Q psy7639 1559 RNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDT----HLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAA 1634 (2568)
Q Consensus 1559 ~~vlV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~----~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~ 1634 (2568)
-+++.+.+|-+-+-+-.+. +|.++ -...|.. ++||-.+|-.++-.|.. ....+.
T Consensus 163 ~nfIavE~G~aytaavaV~--nGkIV--DGmgGttgf~gylg~g~MD~ElAYaLa~-~~~~fs----------------- 220 (374)
T COG2441 163 VNFIAVEIGFAYTAAVAVK--NGKIV--DGMGGTTGFTGYLGGGAMDGELAYALAN-YLERFS----------------- 220 (374)
T ss_pred hhhHHHhhhccceeEEEEE--CCEEE--eccCCccCcccccccccccHHHHHHHHH-hhhhcc-----------------
Confidence 3457788888877776666 67332 2233323 78999999999866543 221110
Q ss_pred HHhhcccCCCCeeEEEEccccCCcceeeecCHHHHHHH---------HhHHHHHHHHHHHHHHHHcCCCCccccEEEEec
Q psy7639 1635 ERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEEL---------CSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVG 1705 (2568)
Q Consensus 1635 E~aK~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~l---------~~pli~~i~~~i~~~L~~a~~~~~~Id~ViLVG 1705 (2568)
|..|...--+ ...|.+ +-++|.++ .+-+++.+++.|...| +....|.|+|.|
T Consensus 221 ---K~~lf~gGa~------~i~gv~-----sp~ef~~~ake~enle~~~~l~e~vvK~v~tll-----ps~~pd~iylSG 281 (374)
T COG2441 221 ---KSLLFEGGAA------YIAGVD-----SPEEFVKLAKEDENLETYNALIEGVVKDVFTLL-----PSTYPDAIYLSG 281 (374)
T ss_pred ---Hhheeccccc------ccccCC-----CHHHHHHHhhcccchHHHHHHHHHHHHHHHHhc-----cccCcceEEEee
Confidence 1111000000 001111 22333322 2234444444444444 333467799999
Q ss_pred CccCChhH----HHHHHhhhcC----Ccccc--cCCchhhhhccHHHHHHHHhCCC
Q psy7639 1706 GSTRIPKV----QSLLQNFFCG----KSLNL--SINPDEAVAYGAAVQAAILSGDQ 1751 (2568)
Q Consensus 1706 Gssr~P~V----~~~I~~~f~~----~~v~~--~~nP~eAVA~GAai~a~~l~~~~ 1751 (2568)
-++++|.+ ++.+++.|.. ..+.. ..--..-.|.|||+.|..++|..
T Consensus 282 rf~~~~~~~~dv~~~l~d~~s~~g~~~evr~le~~~K~KeaA~GaAiiAnaiAGG~ 337 (374)
T COG2441 282 RFSRIPRFFSDVKEKLRDAFSSYGFGIEVRKLESRAKAKEAAEGAAIIANAIAGGL 337 (374)
T ss_pred ecccccchhhHHHHHHHHHHhhcCccceeehhhhhhhhhhhccchhhhhhhhcchh
Confidence 99998764 6666666631 11211 11223446889999998777753
No 272
>PF00480 ROK: ROK family; InterPro: IPR000600 A family of bacterial proteins has been described which groups transcriptional repressors, sugar kinases and yet uncharacterised open reading frames []. This family, known as ROK (Repressor, ORF, Kinase) includes the xylose operon repressor, xylR, from Bacillus subtilis, Lactobacillus pentosus and Staphylococcus xylosus; N-acetylglucosamine repressor, nagC, from Escherichia coli; glucokinase 2.7.1.2 from EC from Streptomyces coelicolor; fructokinase 2.7.1.4 from EC from Pediococcus pentosaceus, Streptococcus mutans and Zymomonas mobilis; allokinase 2.7.1.55 from EC and mlc from E. coli; and E. coli hypothetical proteins yajF and yhcI and the corresponding Haemophilus influenzae proteins. The repressor proteins (xylR and nagC) from this family possess an N-terminal region not present in the sugar kinases and which contains an helix-turn-helix DNA-binding motif.; PDB: 2GUP_A 3LM2_B 3EO3_A 2YHY_A 2YHW_A 2YI1_A 3MCP_A 1Z05_A 3HTV_A 3OHR_A ....
Probab=23.88 E-value=2.8e+02 Score=31.92 Aligned_cols=111 Identities=22% Similarity=0.216 Sum_probs=64.0
Q ss_pred cEEEecCCCceEEEEEcCceeeeChhhhHHHHHHHHHHHHHHHhCCCcccEEEEccCCCCHHH------------HHHHH
Q psy7639 2031 FTVVNDCSKPKIQVEFKGERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQ------------RQATK 2098 (2568)
Q Consensus 2031 ~~~~~~~~~~~~~v~~~~~~~~~~peei~a~iL~~lk~~ae~~~g~~v~~aVItVPa~f~~~q------------R~a~~ 2098 (2568)
+.+++-+|+....-.+.- . .+++++...+..-+++...++-.. .+-|+||..++... --.++
T Consensus 11 ~~l~d~~g~ii~~~~~~~--~-~~~~~~~~~l~~~i~~~~~~~~~~---gIgi~~pG~v~~~~g~i~~~~~~~~~~~~l~ 84 (179)
T PF00480_consen 11 IALVDLDGEIIYSESIPT--P-TSPEELLDALAELIERLLADYGRS---GIGISVPGIVDSEKGRIISSPNPGWENIPLK 84 (179)
T ss_dssp EEEEETTSCEEEEEEEEH--H-SSHHHHHHHHHHHHHHHHHHHTCE---EEEEEESSEEETTTTEEEECSSGTGTTCEHH
T ss_pred EEEECCCCCEEEEEEEEC--C-CCHHHHHHHHHHHHHHHHhhcccc---cEEEeccccCcCCCCeEEecCCCCcccCCHH
Confidence 334455665443332211 1 567888888877777766665311 55555555543332 00111
Q ss_pred -HHHHHcCCceeEEechhhHHHhhcccccCcCCcceEEEEeeCCeeeEEEEE
Q psy7639 2099 -DAGAIAGLNVMRIVNEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSIL 2149 (2568)
Q Consensus 2099 -~Aa~~AGl~vl~linEptAaalaYg~~~~~~~~~~vlv~DlGggt~dvsil 2149 (2568)
.-.+..++.| .+.|+-.|+|+++-........++++++-+|-| .-.+++
T Consensus 85 ~~l~~~~~~pv-~i~Nd~~~~a~ae~~~~~~~~~~~~~~l~ig~G-iG~~ii 134 (179)
T PF00480_consen 85 EELEERFGVPV-IIENDANAAALAEYWFGAAKDCDNFLYLYIGTG-IGAGII 134 (179)
T ss_dssp HHHHHHHTSEE-EEEEHHHHHHHHHHHHSTTTTTSSEEEEEESSS-EEEEEE
T ss_pred HHhhcccceEE-EEecCCCcceeehhhcCccCCcceEEEEEeecC-CCccee
Confidence 1123347766 799999999999876443334578888888876 455554
No 273
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=23.23 E-value=1.9e+02 Score=35.26 Aligned_cols=66 Identities=20% Similarity=0.161 Sum_probs=47.2
Q ss_pred HhhHHHHHHHHHcCCCccCcceEEEecCccC--hHHHHHHHHHhcCC-CCCCCCCCcchhHHhhHHHHHH
Q psy7639 2252 STLQPVEKALQDAKLDKSAIHDVVLVGGSTR--IPKVQSLLQNFFCG-KSLNLSINPDEAVAYGAAVQAA 2318 (2568)
Q Consensus 2252 ~~~~~~~~~l~~a~~~~~~i~~vilvGGstr--iP~v~~~l~~~f~~-~~~~~~~npdeava~GAa~~aa 2318 (2568)
-..+.++++|++++++++|||.|++...+.- .|.....|...+|- ..+...++ .-|.+...|++.|
T Consensus 10 l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~~~~~~~i~-~~C~s~~~al~~A 78 (254)
T cd00327 10 LGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGISGGPAYSVN-QACATGLTALALA 78 (254)
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCCCCCcceec-cHhHHHHHHHHHH
Confidence 3466788999999999999999887764333 68888899999976 44555565 4455555555444
No 274
>cd02641 R3H_Smubp-2_like R3H domain of Smubp-2_like proteins. Smubp-2_like proteins also contain a helicase_like and an AN1-like Zinc finger domain and have been shown to bind single-stranded DNA. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA.
Probab=23.04 E-value=1.9e+02 Score=27.33 Aligned_cols=42 Identities=14% Similarity=0.316 Sum_probs=32.4
Q ss_pred HHHHHHHHhCCCcccEEEEccCCCCHHHHHHHHHHHHHcCCce
Q psy7639 2066 MKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNV 2108 (2568)
Q Consensus 2066 lk~~ae~~~g~~v~~aVItVPa~f~~~qR~a~~~Aa~~AGl~v 2108 (2568)
+.+..+.|...+ ....++.|+.++..||..+-+.|+..||.-
T Consensus 4 ~~~~i~~F~~~~-~~~~l~F~p~ls~~eR~~vH~lA~~~gL~s 45 (60)
T cd02641 4 LKAMVKAFMKDP-KATELEFPPTLSSHDRLLVHELAEELGLRH 45 (60)
T ss_pred HHHHHHHHHcCC-CcCcEECCCCCCHHHHHHHHHHHHHcCCce
Confidence 444455555543 236789999999999999999999988875
No 275
>cd02640 R3H_NRF R3H domain of the NF-kappaB-repression factor (NRF). NRF is a nuclear inhibitor of NF-kappaB proteins that can silence the IFNbeta promoter via binding to a negative regulatory element (NRE). Beside R3H NRF also contains a G-patch domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=22.92 E-value=2.1e+02 Score=27.09 Aligned_cols=41 Identities=12% Similarity=0.187 Sum_probs=32.6
Q ss_pred HHHHHHHhCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcE
Q psy7639 125 KETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNV 166 (2568)
Q Consensus 125 ~~~ae~~l~~~~~~~VITVPa~f~~~qr~al~~Aa~~AGl~~ 166 (2568)
.+..+.+.... ....++.|+.++..+|..+.+.|+..||+.
T Consensus 5 ~~~i~~F~~s~-~~~~l~f~p~lt~~eR~~vH~~a~~~gL~s 45 (60)
T cd02640 5 RQIIQNYAHSD-DIRDMVFSPEFSKEERALIHQIAQKYGLKS 45 (60)
T ss_pred HHHHHHHHcCC-ccceEEcCCCCCHHHHHHHHHHHHHcCCce
Confidence 44445555433 467899999999999999999999999976
No 276
>PRK00180 acetate kinase A/propionate kinase 2; Reviewed
Probab=22.30 E-value=3.7e+02 Score=35.45 Aligned_cols=47 Identities=6% Similarity=0.004 Sum_probs=33.9
Q ss_pred HHHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCCC-CcHHHHHHHHHHhC
Q psy7639 877 CSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGST-RIPKVQSLLQNFFC 926 (2568)
Q Consensus 877 ~~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGss-riP~v~~~l~~~f~ 926 (2568)
++-++.++.+.|-...... ...+|.|+++||.+ ..+.|++.|.+.+.
T Consensus 302 ~d~f~yri~k~Iga~~a~L---~g~vDaiVfTGGIgE~s~~lr~~I~~~l~ 349 (402)
T PRK00180 302 LDVFVYRLAKYIGSYAAAL---NGRLDAIVFTAGIGENSALVREKVLEGLE 349 (402)
T ss_pred HHHHHHHHHHHHHHHHHHh---cCCCCEEEEcCccccCCHHHHHHHHhhhh
Confidence 3444555555555554443 13599999999999 99999999998873
No 277
>PF00480 ROK: ROK family; InterPro: IPR000600 A family of bacterial proteins has been described which groups transcriptional repressors, sugar kinases and yet uncharacterised open reading frames []. This family, known as ROK (Repressor, ORF, Kinase) includes the xylose operon repressor, xylR, from Bacillus subtilis, Lactobacillus pentosus and Staphylococcus xylosus; N-acetylglucosamine repressor, nagC, from Escherichia coli; glucokinase 2.7.1.2 from EC from Streptomyces coelicolor; fructokinase 2.7.1.4 from EC from Pediococcus pentosaceus, Streptococcus mutans and Zymomonas mobilis; allokinase 2.7.1.55 from EC and mlc from E. coli; and E. coli hypothetical proteins yajF and yhcI and the corresponding Haemophilus influenzae proteins. The repressor proteins (xylR and nagC) from this family possess an N-terminal region not present in the sugar kinases and which contains an helix-turn-helix DNA-binding motif.; PDB: 2GUP_A 3LM2_B 3EO3_A 2YHY_A 2YHW_A 2YI1_A 3MCP_A 1Z05_A 3HTV_A 3OHR_A ....
Probab=22.05 E-value=9.3e+02 Score=27.49 Aligned_cols=95 Identities=26% Similarity=0.330 Sum_probs=57.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHHhCCccceEEEEecCCCCHHH-------------HHHHHHHHHHcCCceEEEEechhHHH
Q psy7639 1480 FAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQ-------------RQATKDAGAIAGLNVMRIVNEPTAAA 1546 (2568)
Q Consensus 1480 ~~p~ev~a~iL~~lk~~ae~~l~~~~~~~ViTVPa~f~~~q-------------R~~~~~Aa~~AGL~v~~li~EPtAAa 1546 (2568)
.+++++...+.+.+.+....+ +.. .+.|+||..++... ......--+..++++ .+.|+-.|+|
T Consensus 30 ~~~~~~~~~l~~~i~~~~~~~-~~~--gIgi~~pG~v~~~~g~i~~~~~~~~~~~~l~~~l~~~~~~pv-~i~Nd~~~~a 105 (179)
T PF00480_consen 30 TSPEELLDALAELIERLLADY-GRS--GIGISVPGIVDSEKGRIISSPNPGWENIPLKEELEERFGVPV-IIENDANAAA 105 (179)
T ss_dssp SSHHHHHHHHHHHHHHHHHHH-TCE--EEEEEESSEEETTTTEEEECSSGTGTTCEHHHHHHHHHTSEE-EEEEHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhc-ccc--cEEEeccccCcCCCCeEEecCCCCcccCCHHHHhhcccceEE-EEecCCCcce
Confidence 567777777776666665443 222 66666666543322 011112223346655 6899999999
Q ss_pred HHhhccccccCcceEEEEEeCCcceEEEEEEecCC
Q psy7639 1547 LAYGLDKNLKGERNVLIFDLGGGTFDVSILSIDEG 1581 (2568)
Q Consensus 1547 l~y~~~~~~~~~~~vlV~D~GGGT~Dvsi~~~~~g 1581 (2568)
++..........++++.+-+|-| +-.+++. +|
T Consensus 106 ~ae~~~~~~~~~~~~~~l~ig~G-iG~~ii~--~g 137 (179)
T PF00480_consen 106 LAEYWFGAAKDCDNFLYLYIGTG-IGAGIII--NG 137 (179)
T ss_dssp HHHHHHSTTTTTSSEEEEEESSS-EEEEEEE--TT
T ss_pred eehhhcCccCCcceEEEEEeecC-CCcceec--cc
Confidence 98766443344567888889876 5666664 66
No 278
>COG3894 Uncharacterized metal-binding protein [General function prediction only]
Probab=21.87 E-value=3.3e+02 Score=36.06 Aligned_cols=44 Identities=23% Similarity=0.379 Sum_probs=37.7
Q ss_pred EEEEeCCcceEEEEEEecCCcEEEEEEecCCCCCChhHHHHHHH
Q psy7639 1562 LIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLV 1605 (2568)
Q Consensus 1562 lV~D~GGGT~Dvsi~~~~~g~~~ev~~~~gd~~lGG~d~D~~l~ 1605 (2568)
+-+|+|..|+-..++.+..|.+.....+.....-||+++|.+..
T Consensus 167 vAvDlGTS~i~aqlVDL~sgevv~t~~T~n~ql~~Ge~m~sr~~ 210 (614)
T COG3894 167 VAVDLGTSGIRAQLVDLKSGEVVATVITSNPQLPGGEVMDSRDF 210 (614)
T ss_pred eEEecccceeeeEEEeccCCcEEEeeeccCCCCCCchhhHHHHH
Confidence 66999999999999999999777777777777789999998764
No 279
>PTZ00288 glucokinase 1; Provisional
Probab=20.98 E-value=4.8e+02 Score=34.57 Aligned_cols=257 Identities=18% Similarity=0.139 Sum_probs=0.0
Q ss_pred ecCCCceEEEEEc-CceeeeChhhhHHHHHHHHHHHHHHHhCCCcccEEEEccCCCCHHHH-----------HHHHHHHH
Q psy7639 2035 NDCSKPKIQVEFK-GERKTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQR-----------QATKDAGA 2102 (2568)
Q Consensus 2035 ~~~~~~~~~v~~~-~~~~~~~peei~a~iL~~lk~~ae~~~g~~v~~aVItVPa~f~~~qR-----------~a~~~Aa~ 2102 (2568)
+....-...+.+. .....+..-+..+.+|.+|++..--. +.+..+||+||.=-.+.+. +.|-.-=.
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~a~iAvAGPV~~~~~~~~~~~~~~~~~lTNlpw~ 126 (405)
T PTZ00288 49 DDSGVHIIYVRFNVTKTDIRELLEFFDEVLQKLKKNLSFI--QRVAAGAISVPGPVTGGQLAGPFNNLKGIARLTDYPVE 126 (405)
T ss_pred CCCceeEEEEecccccccHHHHHHHHHHHHHHHHhcCccc--cCcCeEEEEEeCceeCCEeeccccccccccccCCCCch
Q ss_pred HcCCceeEEechhhHHHhhcccccCcC----------------------------CcceEEEEeeCCeeeEEEEEEEcC-
Q psy7639 2103 IAGLNVMRIVNEPTAAALAYGLDKNLK----------------------------GERNVLIFDLGGGTFDVSILSIDE- 2153 (2568)
Q Consensus 2103 ~AGl~vl~linEptAaalaYg~~~~~~----------------------------~~~~vlv~DlGggt~dvsil~~~~- 2153 (2568)
+.|+.-++|||+=+|.|++--.-.... ...+++|+=+|.| +=++++.-..
T Consensus 127 i~~~~~~~liNDfeA~aygi~~l~~~~~~~~~f~~~~~~~~~~~l~~~~~~g~~~~~~~~~Vlg~GTG-LG~alli~~~l 205 (405)
T PTZ00288 127 LFPPGRSALLNDLEAGAYGVLAVSNAGRLSEYFKVMWKGTQWDALSEGKPAGSVIGRGRCMVLAPGTG-LGSSLIHYVGV 205 (405)
T ss_pred hcCCCeEEEEEhHHHHhCcccccChhhcccccccccccccceeeecCCCCCcccCCCCCEEEEEeccc-eeEEEEECCee
Q ss_pred -CcEEEEEEe-ccCCCc---chh--HHHHHHHHHHHHHHHHHh-------CCCCCCCHHHHHHHHHH-------------
Q psy7639 2154 -GALFEVRST-AGDTHL---GGE--DFDNRLVSHLAEEFKRKY-------KKDMSVNPRALRRLRTA------------- 2206 (2568)
Q Consensus 2154 -g~~~~v~~~-~gd~~l---GG~--d~D~~l~~~~~~~f~~~~-------~~d~~~~~~~~~~L~~~------------- 2206 (2568)
+ -..+.++ .|...+ ++. +....|.+|+.+++..+. -.+---+-+++.++...
T Consensus 206 ~~-G~~~~agEgGHv~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~~~~~vs~E~v~SG~GL~~ly~~l~~~~~~~~~~~~ 284 (405)
T PTZ00288 206 SD-QYIVIPLECGHLSISWPANEDSDYVQALAGYLASKALSKGIDSTVYPIYEDIVSGRGLEFNYAYEKRGNKPSAPLKE 284 (405)
T ss_pred cC-CcccccccccceeeccCCCCccchhHHHHHHHHhhhccccccccCceeEeEEecHHHHHHHHHHHhccCCCccCcCC
Q ss_pred -HHHHhhccCCcceeEEEEecccCCcceEEeeCHHHHHHHhHHHHHHhhHHHHHHHHHcCCCccCcceEEEec-CccCh-
Q psy7639 2207 -AERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVG-GSTRI- 2283 (2568)
Q Consensus 2207 -~e~~K~~LS~~~~~~~~i~~~~~~~d~~~~itr~~fe~l~~~l~~~~~~~~~~~l~~a~~~~~~i~~vilvG-Gstri- 2283 (2568)
++.++..++.... ++...+++..+.+-+++...-+...==. |+|.| |..++
T Consensus 285 ~a~ia~~A~~~gD~-------------------------~A~~al~~f~~~LG~~~~nlal~l~P~~-VvIgGGi~~~~~ 338 (405)
T PTZ00288 285 AAEVAKLAKYGSDV-------------------------AAVKAMKRHYKYLMRLAAEISMQFLPLT-VVLMGDNIVYNS 338 (405)
T ss_pred HHHHHHHHHhCCCH-------------------------HHHHHHHHHHHHHHHHHHHHHHHHCCCE-EEEECccHHhhH
Q ss_pred HHHHHHH----------------HHhcCCCCCCCCCCcchhHHhhHHHHHHHhh
Q psy7639 2284 PKVQSLL----------------QNFFCGKSLNLSINPDEAVAYGAAVQAAILS 2321 (2568)
Q Consensus 2284 P~v~~~l----------------~~~f~~~~~~~~~npdeava~GAa~~aa~ls 2321 (2568)
|++++.- .+++...++..-+--+..--+|||+.|..++
T Consensus 339 ~~l~~~~~~~f~~~f~~~~k~~r~~~l~~ipv~~qv~~~~~gL~Gaa~~a~~~~ 392 (405)
T PTZ00288 339 FFFDNPENVKQLQARITEHKMERLKFLSRTTFLRQKKSVNLNLLGCLQFGSQLS 392 (405)
T ss_pred HHHhccchHHHHHHHHhcCccChHHHHhcCceEEEEeCCCccHHHHHHHHHHhh
No 280
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism]
Probab=20.28 E-value=1.7e+02 Score=36.29 Aligned_cols=86 Identities=27% Similarity=0.285 Sum_probs=51.4
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCceEEEE---echhHHHHHhhccc-cccCcceEEEEEeCCcceEEEEEEecCCcE
Q psy7639 1508 AVITVPAYFNDAQRQATKDAGAIAGLNVMRIV---NEPTAAALAYGLDK-NLKGERNVLIFDLGGGTFDVSILSIDEGAL 1583 (2568)
Q Consensus 1508 ~ViTVPa~f~~~qR~~~~~Aa~~AGL~v~~li---~EPtAAal~y~~~~-~~~~~~~vlV~D~GGGT~Dvsi~~~~~g~~ 1583 (2568)
++||=-..-.+..|..+..-...||==|+.-. .|+.-|.-..+... +.+....++=+|+||||+..|++. .|
T Consensus 90 vIITGEtArk~NA~~vl~alSg~aGDFVVAtAGPdLESiIAGkGaGA~t~Seqr~t~v~NlDIGGGTtN~slFD--~G-- 165 (473)
T COG4819 90 VIITGETARKRNARPVLMALSGSAGDFVVATAGPDLESIIAGKGAGAQTLSEQRLTRVLNLDIGGGTTNYSLFD--AG-- 165 (473)
T ss_pred EEEeccccccccchHHHHHhhhcccceEEEecCCCHHHHhccCCccccchhhhhceEEEEEeccCCccceeeec--cc--
Confidence 55666666677778888777777775443221 23333322222211 222345677899999999999997 46
Q ss_pred EEEEEecCCCCCChhH
Q psy7639 1584 FEVRSTAGDTHLGGED 1599 (2568)
Q Consensus 1584 ~ev~~~~gd~~lGG~d 1599 (2568)
++..+..-+ .||+-
T Consensus 166 -kv~dTaCLd-iGGRL 179 (473)
T COG4819 166 -KVSDTACLD-IGGRL 179 (473)
T ss_pred -ccccceeee-cCcEE
Confidence 555555433 67653
No 281
>TIGR00016 ackA acetate kinase. Acetate kinase is involved in the activation of acetate to acetyl CoA and in the secretion of acetate. It catalyzes the reaction ATP + acetate = ADP + acetyl phosphate. Some members of this family have been shown to act on propionate as well as acetate. An example of a propionate/acetate kinase is TdcD of E. coli, an enzyme of an anaerobic pathway of threonine catabolism. It is not known how many members of this family act on additional substrates besides acetate.
Probab=20.18 E-value=6.5e+02 Score=33.17 Aligned_cols=46 Identities=11% Similarity=0.191 Sum_probs=32.4
Q ss_pred HHHHHhHHHHHHHHHHHccCCccCcCeEEEEcCCC-CcHHHHHHHHHHhC
Q psy7639 878 SDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGST-RIPKVQSLLQNFFC 926 (2568)
Q Consensus 878 ~~l~~~i~~~i~~~L~~a~~~~~~I~~ViLvGGss-riP~v~~~l~~~f~ 926 (2568)
+-++.++.+.|-......+ ..+|.|+++||-+ ..+.|++.|.+.+.
T Consensus 307 ~~f~yri~k~Iga~~a~L~---G~vDaiVFTGGIGEns~~vr~~i~~~l~ 353 (404)
T TIGR00016 307 KMYVHRIAKYIGSYIASLE---GNLDAIVFTGGIGENAATVRELVLEALE 353 (404)
T ss_pred HHHHHHHHHHHHHHHHHhC---CCCCEEEEcCccccCCHHHHHHHHhhhh
Confidence 3344455555544444332 2499999999999 99999999998873
No 282
>KOG1385|consensus
Probab=20.08 E-value=79 Score=40.62 Aligned_cols=32 Identities=34% Similarity=0.571 Sum_probs=22.5
Q ss_pred hhcccccCcC-CcceEEEEeeCCeeeEEEEEEE
Q psy7639 2120 LAYGLDKNLK-GERNVLIFDLGGGTFDVSILSI 2151 (2568)
Q Consensus 2120 laYg~~~~~~-~~~~vlv~DlGggt~dvsil~~ 2151 (2568)
++|=+..-.. ...++.|+|||||+++++.+--
T Consensus 200 iN~Llg~L~~~~~~tvgv~DLGGGSTQi~f~p~ 232 (453)
T KOG1385|consen 200 INYLLGTLGAPGHRTVGVVDLGGGSTQITFLPT 232 (453)
T ss_pred hhhhhcccCCCCCCceEEEEcCCceEEEEEecC
Confidence 4554433222 2578999999999999998763
No 283
>PLN02377 3-ketoacyl-CoA synthase
Probab=20.05 E-value=2e+02 Score=38.98 Aligned_cols=67 Identities=10% Similarity=0.136 Sum_probs=47.3
Q ss_pred HHhhHHHHHHHHHcCCCccCcceEEE-ecCccChHHHHHHHHHhcCCCC--CCCCCCcchhHHhhHHHHH
Q psy7639 2251 RSTLQPVEKALQDAKLDKSAIHDVVL-VGGSTRIPKVQSLLQNFFCGKS--LNLSINPDEAVAYGAAVQA 2317 (2568)
Q Consensus 2251 ~~~~~~~~~~l~~a~~~~~~i~~vil-vGGstriP~v~~~l~~~f~~~~--~~~~~npdeava~GAa~~a 2317 (2568)
.=....++++|+++|++++|||.||. +.+-..+|-+--+|.+.+|-++ ...++|.--|.+.-.|+.-
T Consensus 174 ~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~l 243 (502)
T PLN02377 174 QVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDL 243 (502)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHH
Confidence 33456778999999999999998876 3344458999999999996442 2445555455555555543
Done!