RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7639
(2568 letters)
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase
fragment {Cow (Bos taurus) [TaxId: 9913]}
Length = 193
Score = 259 bits (664), Expect = 5e-80
Identities = 156/192 (81%), Positives = 175/192 (91%), Gaps = 1/192 (0%)
Query: 188 GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKY 247
ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H EFKRK+
Sbjct: 3 AERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 61
Query: 248 KKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDL 307
KKD+S N RA+RRLRTA ERAKRTLSSST+ASIEID+LY+GIDFYT I+RARFEEL +DL
Sbjct: 62 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADL 121
Query: 308 FRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAV 367
FR TL PVEKAL+DAKLDKS IHD+VLVGGSTRIPK+Q LLQ+FF GK LN SINPDEAV
Sbjct: 122 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 181
Query: 368 AYGAAVQAAILS 379
AYGAAVQAAILS
Sbjct: 182 AYGAAVQAAILS 193
Score = 259 bits (664), Expect = 5e-80
Identities = 156/192 (81%), Positives = 175/192 (91%), Gaps = 1/192 (0%)
Query: 761 GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKY 820
ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H EFKRK+
Sbjct: 3 AERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 61
Query: 821 KKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDL 880
KKD+S N RA+RRLRTA ERAKRTLSSST+ASIEID+LY+GIDFYT I+RARFEEL +DL
Sbjct: 62 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADL 121
Query: 881 FRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAV 940
FR TL PVEKAL+DAKLDKS IHD+VLVGGSTRIPK+Q LLQ+FF GK LN SINPDEAV
Sbjct: 122 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 181
Query: 941 AYGAAVQAAILS 952
AYGAAVQAAILS
Sbjct: 182 AYGAAVQAAILS 193
Score = 259 bits (664), Expect = 5e-80
Identities = 156/192 (81%), Positives = 175/192 (91%), Gaps = 1/192 (0%)
Query: 1557 GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKY 1616
ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H EFKRK+
Sbjct: 3 AERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 61
Query: 1617 KKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDL 1676
KKD+S N RA+RRLRTA ERAKRTLSSST+ASIEID+LY+GIDFYT I+RARFEEL +DL
Sbjct: 62 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADL 121
Query: 1677 FRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAV 1736
FR TL PVEKAL+DAKLDKS IHD+VLVGGSTRIPK+Q LLQ+FF GK LN SINPDEAV
Sbjct: 122 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 181
Query: 1737 AYGAAVQAAILS 1748
AYGAAVQAAILS
Sbjct: 182 AYGAAVQAAILS 193
Score = 259 bits (664), Expect = 5e-80
Identities = 156/192 (81%), Positives = 175/192 (91%), Gaps = 1/192 (0%)
Query: 2130 GERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKY 2189
ERNVLIFDLGGGTFDVSIL+I++G +FEV+STAGDTHLGGEDFDNR+V+H EFKRK+
Sbjct: 3 AERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 61
Query: 2190 KKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDL 2249
KKD+S N RA+RRLRTA ERAKRTLSSST+ASIEID+LY+GIDFYT I+RARFEEL +DL
Sbjct: 62 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADL 121
Query: 2250 FRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAV 2309
FR TL PVEKAL+DAKLDKS IHD+VLVGGSTRIPK+Q LLQ+FF GK LN SINPDEAV
Sbjct: 122 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 181
Query: 2310 AYGAAVQAAILS 2321
AYGAAVQAAILS
Sbjct: 182 AYGAAVQAAILS 193
Score = 55.8 bits (134), Expect = 7e-09
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 26/156 (16%)
Query: 1086 IDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDA 1145
++ I + +R +D + +R R ++ A + A K T S ++ E D+
Sbjct: 50 VNHFIAEFKRKHKKDISENKRAVRR---------LRTACERA--KRTLSSSTQASIEIDS 98
Query: 1146 TLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGAGGASAGDMPR----GGPT---- 1197
+ +D T + +++ L + + + K A + GG T
Sbjct: 99 LYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAK-LDKSQIHDIVLVGGSTRIPK 157
Query: 1198 ------NFFCGKSLNLSINPDEAVAYGAAVQAAILS 1227
+FF GK LN SINPDEAVAYGAAVQAAILS
Sbjct: 158 IQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 193
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase
fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Length = 198
Score = 256 bits (655), Expect = 9e-79
Identities = 93/199 (46%), Positives = 129/199 (64%), Gaps = 8/199 (4%)
Query: 188 GERNVLIFDLGGGTFDVSILSIDE---GALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFK 244
G R + ++DLGGGTFD+SI+ IDE FEV +T GDTHLGGEDFD+RL+++L EEFK
Sbjct: 1 GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFK 60
Query: 245 RKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGI----DFYTKISRARF 300
+ D+ +P A++RL+ AAE+AK LSS+ + + + + K++RA+
Sbjct: 61 KDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKL 120
Query: 301 EELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLS 360
E L DL +++ ++ ALQDA L S I DV+LVGG TR+P VQ + FF GK
Sbjct: 121 ESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKD 179
Query: 361 INPDEAVAYGAAVQAAILS 379
+NPDEAVA GAAVQ +L+
Sbjct: 180 VNPDEAVAIGAAVQGGVLT 198
Score = 256 bits (655), Expect = 9e-79
Identities = 93/199 (46%), Positives = 129/199 (64%), Gaps = 8/199 (4%)
Query: 761 GERNVLIFDLGGGTFDVSILSIDE---GALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFK 817
G R + ++DLGGGTFD+SI+ IDE FEV +T GDTHLGGEDFD+RL+++L EEFK
Sbjct: 1 GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFK 60
Query: 818 RKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGI----DFYTKISRARF 873
+ D+ +P A++RL+ AAE+AK LSS+ + + + + K++RA+
Sbjct: 61 KDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKL 120
Query: 874 EELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLS 933
E L DL +++ ++ ALQDA L S I DV+LVGG TR+P VQ + FF GK
Sbjct: 121 ESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKD 179
Query: 934 INPDEAVAYGAAVQAAILS 952
+NPDEAVA GAAVQ +L+
Sbjct: 180 VNPDEAVAIGAAVQGGVLT 198
Score = 256 bits (655), Expect = 9e-79
Identities = 93/199 (46%), Positives = 129/199 (64%), Gaps = 8/199 (4%)
Query: 1557 GERNVLIFDLGGGTFDVSILSIDE---GALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFK 1613
G R + ++DLGGGTFD+SI+ IDE FEV +T GDTHLGGEDFD+RL+++L EEFK
Sbjct: 1 GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFK 60
Query: 1614 RKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGI----DFYTKISRARF 1669
+ D+ +P A++RL+ AAE+AK LSS+ + + + + K++RA+
Sbjct: 61 KDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKL 120
Query: 1670 EELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLS 1729
E L DL +++ ++ ALQDA L S I DV+LVGG TR+P VQ + FF GK
Sbjct: 121 ESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKD 179
Query: 1730 INPDEAVAYGAAVQAAILS 1748
+NPDEAVA GAAVQ +L+
Sbjct: 180 VNPDEAVAIGAAVQGGVLT 198
Score = 256 bits (655), Expect = 9e-79
Identities = 93/199 (46%), Positives = 129/199 (64%), Gaps = 8/199 (4%)
Query: 2130 GERNVLIFDLGGGTFDVSILSIDE---GALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFK 2186
G R + ++DLGGGTFD+SI+ IDE FEV +T GDTHLGGEDFD+RL+++L EEFK
Sbjct: 1 GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFK 60
Query: 2187 RKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGI----DFYTKISRARF 2242
+ D+ +P A++RL+ AAE+AK LSS+ + + + + K++RA+
Sbjct: 61 KDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKL 120
Query: 2243 EELCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLS 2302
E L DL +++ ++ ALQDA L S I DV+LVGG TR+P VQ + FF GK
Sbjct: 121 ESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKD 179
Query: 2303 INPDEAVAYGAAVQAAILS 2321
+NPDEAVA GAAVQ +L+
Sbjct: 180 VNPDEAVAIGAAVQGGVLT 198
Score = 51.8 bits (124), Expect = 2e-07
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 1200 FCGKSLNLSINPDEAVAYGAAVQAAILS 1227
F GK +NPDEAVA GAAVQ +L+
Sbjct: 171 FFGKEPRKDVNPDEAVAIGAAVQGGVLT 198
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 159
Score = 234 bits (598), Expect = 1e-71
Identities = 118/159 (74%), Positives = 143/159 (89%)
Query: 956 SSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFE 1015
S +QD+LL+DVTPLSLGIETAGGVMT LI+RNT IP KQTQTFTTY+DNQP V IQV+E
Sbjct: 1 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 60
Query: 1016 GERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIK 1075
GERAMTKDNNLLG F+LTGIPPAPRGVP+I+VTFD+DANGILNV+A D S+GK ITI
Sbjct: 61 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 120
Query: 1076 NDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLE 1114
NDKGRLSKE+I+RM+ +AE+YK EDE+Q++++S++N+LE
Sbjct: 121 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 159
Score = 234 bits (598), Expect = 1e-71
Identities = 118/159 (74%), Positives = 143/159 (89%)
Query: 1752 SSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFE 1811
S +QD+LL+DVTPLSLGIETAGGVMT LI+RNT IP KQTQTFTTY+DNQP V IQV+E
Sbjct: 1 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 60
Query: 1812 GERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIK 1871
GERAMTKDNNLLG F+LTGIPPAPRGVP+I+VTFD+DANGILNV+A D S+GK ITI
Sbjct: 61 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 120
Query: 1872 NDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLE 1910
NDKGRLSKE+I+RM+ +AE+YK EDE+Q++++S++N+LE
Sbjct: 121 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 159
Score = 234 bits (598), Expect = 1e-71
Identities = 118/159 (74%), Positives = 143/159 (89%)
Query: 2325 SSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFE 2384
S +QD+LL+DVTPLSLGIETAGGVMT LI+RNT IP KQTQTFTTY+DNQP V IQV+E
Sbjct: 1 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 60
Query: 2385 GERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIK 2444
GERAMTKDNNLLG F+LTGIPPAPRGVP+I+VTFD+DANGILNV+A D S+GK ITI
Sbjct: 61 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 120
Query: 2445 NDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLE 2483
NDKGRLSKE+I+RM+ +AE+YK EDE+Q++++S++N+LE
Sbjct: 121 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 159
Score = 232 bits (594), Expect = 4e-71
Identities = 117/159 (73%), Positives = 143/159 (89%)
Query: 383 SSAIQDVLLVDVTPLSLGIETAGGVMSKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFE 442
S +QD+LL+DVTPLSLGIETAGGVM+ LI+RNT IP KQTQTFTTY+DNQP V IQV+E
Sbjct: 1 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 60
Query: 443 GERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIK 502
GERAMTKDNNLLG F+LTGIPPAPRGVP+I+VTFD+DANGILNV+A D S+GK ITI
Sbjct: 61 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 120
Query: 503 NDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLE 541
NDKGRLSKE+I+RM+ +AE+YK EDE+Q++++S++N+LE
Sbjct: 121 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 159
Score = 232 bits (594), Expect = 4e-71
Identities = 117/159 (73%), Positives = 143/159 (89%)
Query: 1231 SSAIQDVLLVDVTPLSLGIETAGGVMSKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFE 1290
S +QD+LL+DVTPLSLGIETAGGVM+ LI+RNT IP KQTQTFTTY+DNQP V IQV+E
Sbjct: 1 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 60
Query: 1291 GERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIK 1350
GERAMTKDNNLLG F+LTGIPPAPRGVP+I+VTFD+DANGILNV+A D S+GK ITI
Sbjct: 61 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 120
Query: 1351 NDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLE 1389
NDKGRLSKE+I+RM+ +AE+YK EDE+Q++++S++N+LE
Sbjct: 121 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 159
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase
fragment {Cow (Bos taurus) [TaxId: 9913]}
Length = 185
Score = 201 bits (512), Expect = 8e-60
Identities = 109/136 (80%), Positives = 123/136 (90%)
Query: 49 GDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGER 108
GDAAKNQVAMNP NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE
Sbjct: 49 GDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGET 108
Query: 109 KTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMR 168
K+F PEE+SSMVLTKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+R
Sbjct: 109 KSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLR 168
Query: 169 IVNEPTAAALAYGLDK 184
I+NEPTAAA+AYGLDK
Sbjct: 169 IINEPTAAAIAYGLDK 184
Score = 201 bits (512), Expect = 8e-60
Identities = 109/136 (80%), Positives = 123/136 (90%)
Query: 622 GDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGER 681
GDAAKNQVAMNP NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE
Sbjct: 49 GDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGET 108
Query: 682 KTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMR 741
K+F PEE+SSMVLTKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+R
Sbjct: 109 KSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLR 168
Query: 742 IVNEPTAAALAYGLDK 757
I+NEPTAAA+AYGLDK
Sbjct: 169 IINEPTAAAIAYGLDK 184
Score = 201 bits (512), Expect = 8e-60
Identities = 109/136 (80%), Positives = 123/136 (90%)
Query: 1991 GDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGER 2050
GDAAKNQVAMNP NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE
Sbjct: 49 GDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGET 108
Query: 2051 KTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMR 2110
K+F PEE+SSMVLTKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+R
Sbjct: 109 KSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLR 168
Query: 2111 IVNEPTAAALAYGLDK 2126
I+NEPTAAA+AYGLDK
Sbjct: 169 IINEPTAAAIAYGLDK 184
Score = 199 bits (506), Expect = 9e-59
Identities = 107/134 (79%), Positives = 121/134 (90%)
Query: 1420 AAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGERKT 1479
AAKNQVAMNP NTVFDAKRLIGR+FDD +Q DMKHWPF VVND +PK+QVE+KGE K+
Sbjct: 51 AAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKS 110
Query: 1480 FAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIV 1539
F PEE+SSMVLTKMKE AEAYLG +V +AV+TVPAYFND+QRQATKDAG IAGLNV+RI+
Sbjct: 111 FYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRII 170
Query: 1540 NEPTAAALAYGLDK 1553
NEPTAAA+AYGLDK
Sbjct: 171 NEPTAAAIAYGLDK 184
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase
fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Length = 183
Score = 195 bits (496), Expect = 2e-57
Identities = 83/137 (60%), Positives = 98/137 (71%), Gaps = 3/137 (2%)
Query: 49 GDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGER 108
G AK Q NP+NT+F KRLIGR+F D ++Q+D+ PF ++ VE KG
Sbjct: 49 GQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAA-DNGDAWVEVKG-- 105
Query: 109 KTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMR 168
+ AP +IS+ VL KMK+TAE YLG V +AVITVPAYFNDAQRQATKDAG IAGL V R
Sbjct: 106 QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKR 165
Query: 169 IVNEPTAAALAYGLDKN 185
I+NEPTAAALAYGLDK
Sbjct: 166 IINEPTAAALAYGLDKG 182
Score = 195 bits (496), Expect = 2e-57
Identities = 83/137 (60%), Positives = 98/137 (71%), Gaps = 3/137 (2%)
Query: 622 GDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGER 681
G AK Q NP+NT+F KRLIGR+F D ++Q+D+ PF ++ VE KG
Sbjct: 49 GQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAA-DNGDAWVEVKG-- 105
Query: 682 KTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMR 741
+ AP +IS+ VL KMK+TAE YLG V +AVITVPAYFNDAQRQATKDAG IAGL V R
Sbjct: 106 QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKR 165
Query: 742 IVNEPTAAALAYGLDKN 758
I+NEPTAAALAYGLDK
Sbjct: 166 IINEPTAAALAYGLDKG 182
Score = 195 bits (496), Expect = 2e-57
Identities = 83/137 (60%), Positives = 98/137 (71%), Gaps = 3/137 (2%)
Query: 1991 GDAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGER 2050
G AK Q NP+NT+F KRLIGR+F D ++Q+D+ PF ++ VE KG
Sbjct: 49 GQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAA-DNGDAWVEVKG-- 105
Query: 2051 KTFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMR 2110
+ AP +IS+ VL KMK+TAE YLG V +AVITVPAYFNDAQRQATKDAG IAGL V R
Sbjct: 106 QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKR 165
Query: 2111 IVNEPTAAALAYGLDKN 2127
I+NEPTAAALAYGLDK
Sbjct: 166 IINEPTAAALAYGLDKG 182
Score = 192 bits (490), Expect = 1e-56
Identities = 82/136 (60%), Positives = 97/136 (71%), Gaps = 3/136 (2%)
Query: 1419 DAAKNQVAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGERK 1478
AK Q NP+NT+F KRLIGR+F D ++Q+D+ PF ++ VE KG +
Sbjct: 50 QPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAA-DNGDAWVEVKG--Q 106
Query: 1479 TFAPEEISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRI 1538
AP +IS+ VL KMK+TAE YLG V +AVITVPAYFNDAQRQATKDAG IAGL V RI
Sbjct: 107 KMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRI 166
Query: 1539 VNEPTAAALAYGLDKN 1554
+NEPTAAALAYGLDK
Sbjct: 167 INEPTAAALAYGLDKG 182
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]}
Length = 118
Score = 188 bits (480), Expect = 2e-56
Identities = 76/118 (64%), Positives = 91/118 (77%)
Query: 962 VLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMT 1021
VLL+DVTPLSLGIET GGVMT LI +NT IP K +Q F+T DNQ AV+I V +GER
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRA 60
Query: 1022 KDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 1079
DN LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK G
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 118
Score = 188 bits (480), Expect = 2e-56
Identities = 76/118 (64%), Positives = 91/118 (77%)
Query: 1758 VLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMT 1817
VLL+DVTPLSLGIET GGVMT LI +NT IP K +Q F+T DNQ AV+I V +GER
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRA 60
Query: 1818 KDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 1875
DN LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK G
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 118
Score = 188 bits (480), Expect = 2e-56
Identities = 76/118 (64%), Positives = 91/118 (77%)
Query: 2331 VLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMT 2390
VLL+DVTPLSLGIET GGVMT LI +NT IP K +Q F+T DNQ AV+I V +GER
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRA 60
Query: 2391 KDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 2448
DN LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK G
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 118
Score = 187 bits (476), Expect = 8e-56
Identities = 75/118 (63%), Positives = 91/118 (77%)
Query: 389 VLLVDVTPLSLGIETAGGVMSKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMT 448
VLL+DVTPLSLGIET GGVM+ LI +NT IP K +Q F+T DNQ AV+I V +GER
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRA 60
Query: 449 KDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 506
DN LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK G
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 118
Score = 187 bits (476), Expect = 8e-56
Identities = 75/118 (63%), Positives = 91/118 (77%)
Query: 1237 VLLVDVTPLSLGIETAGGVMSKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMT 1296
VLL+DVTPLSLGIET GGVM+ LI +NT IP K +Q F+T DNQ AV+I V +GER
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRA 60
Query: 1297 KDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 1354
DN LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK G
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 118
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66)
{Escherichia coli [TaxId: 562]}
Length = 115
Score = 165 bits (420), Expect = 3e-48
Identities = 55/114 (48%), Positives = 74/114 (64%)
Query: 966 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 1025
DV PLSLG+ET GG++ K+I RNT IP + Q FTT+ D Q A++I V +GER + +D
Sbjct: 2 DVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCR 61
Query: 1026 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 1079
L F L GIP P G I VTF +DA+G+L+VTA + S+G +I +K G
Sbjct: 62 SLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYG 115
Score = 165 bits (420), Expect = 3e-48
Identities = 55/114 (48%), Positives = 74/114 (64%)
Query: 1762 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 1821
DV PLSLG+ET GG++ K+I RNT IP + Q FTT+ D Q A++I V +GER + +D
Sbjct: 2 DVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCR 61
Query: 1822 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 1875
L F L GIP P G I VTF +DA+G+L+VTA + S+G +I +K G
Sbjct: 62 SLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYG 115
Score = 165 bits (420), Expect = 3e-48
Identities = 55/114 (48%), Positives = 74/114 (64%)
Query: 2335 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 2394
DV PLSLG+ET GG++ K+I RNT IP + Q FTT+ D Q A++I V +GER + +D
Sbjct: 2 DVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCR 61
Query: 2395 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 2448
L F L GIP P G I VTF +DA+G+L+VTA + S+G +I +K G
Sbjct: 62 SLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYG 115
Score = 164 bits (416), Expect = 1e-47
Identities = 55/114 (48%), Positives = 74/114 (64%)
Query: 393 DVTPLSLGIETAGGVMSKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 452
DV PLSLG+ET GG++ K+I RNT IP + Q FTT+ D Q A++I V +GER + +D
Sbjct: 2 DVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCR 61
Query: 453 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 506
L F L GIP P G I VTF +DA+G+L+VTA + S+G +I +K G
Sbjct: 62 SLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYG 115
Score = 164 bits (416), Expect = 1e-47
Identities = 55/114 (48%), Positives = 74/114 (64%)
Query: 1241 DVTPLSLGIETAGGVMSKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 1300
DV PLSLG+ET GG++ K+I RNT IP + Q FTT+ D Q A++I V +GER + +D
Sbjct: 2 DVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCR 61
Query: 1301 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 1354
L F L GIP P G I VTF +DA+G+L+VTA + S+G +I +K G
Sbjct: 62 SLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYG 115
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB
{Thermotoga maritima [TaxId: 2336]}
Length = 196
Score = 116 bits (291), Expect = 9e-30
Identities = 33/190 (17%), Positives = 73/190 (38%), Gaps = 15/190 (7%)
Query: 189 ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYK 248
++ D+GGGT +V+++S+ T + G++ D +V ++ E ++
Sbjct: 6 PSGNMVVDIGGGTTEVAVISLGSIV------TWESIRIAGDEMDEAIVQYVRETYRVAIG 59
Query: 249 KDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLF 308
+ + + ++ + E ++ L G+ + E +
Sbjct: 60 ERTAERVKIEIGNVFPSKE-----NDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVV 114
Query: 309 RSTLQPVEKALQDAKLDKSA---IHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDE 365
+ ++ V L+ + + + L GG + + + +LLQ G S+ S P
Sbjct: 115 VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLT 173
Query: 366 AVAYGAAVQA 375
AVA GA +
Sbjct: 174 AVAKGAGMVL 183
Score = 116 bits (291), Expect = 9e-30
Identities = 33/190 (17%), Positives = 73/190 (38%), Gaps = 15/190 (7%)
Query: 762 ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYK 821
++ D+GGGT +V+++S+ T + G++ D +V ++ E ++
Sbjct: 6 PSGNMVVDIGGGTTEVAVISLGSIV------TWESIRIAGDEMDEAIVQYVRETYRVAIG 59
Query: 822 KDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLF 881
+ + + ++ + E ++ L G+ + E +
Sbjct: 60 ERTAERVKIEIGNVFPSKE-----NDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVV 114
Query: 882 RSTLQPVEKALQDAKLDKSA---IHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDE 938
+ ++ V L+ + + + L GG + + + +LLQ G S+ S P
Sbjct: 115 VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLT 173
Query: 939 AVAYGAAVQA 948
AVA GA +
Sbjct: 174 AVAKGAGMVL 183
Score = 116 bits (291), Expect = 9e-30
Identities = 33/190 (17%), Positives = 73/190 (38%), Gaps = 15/190 (7%)
Query: 1558 ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYK 1617
++ D+GGGT +V+++S+ T + G++ D +V ++ E ++
Sbjct: 6 PSGNMVVDIGGGTTEVAVISLGSIV------TWESIRIAGDEMDEAIVQYVRETYRVAIG 59
Query: 1618 KDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLF 1677
+ + + ++ + E ++ L G+ + E +
Sbjct: 60 ERTAERVKIEIGNVFPSKE-----NDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVV 114
Query: 1678 RSTLQPVEKALQDAKLDKSA---IHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDE 1734
+ ++ V L+ + + + L GG + + + +LLQ G S+ S P
Sbjct: 115 VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLT 173
Query: 1735 AVAYGAAVQA 1744
AVA GA +
Sbjct: 174 AVAKGAGMVL 183
Score = 116 bits (291), Expect = 9e-30
Identities = 33/190 (17%), Positives = 73/190 (38%), Gaps = 15/190 (7%)
Query: 2131 ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYK 2190
++ D+GGGT +V+++S+ T + G++ D +V ++ E ++
Sbjct: 6 PSGNMVVDIGGGTTEVAVISLGSIV------TWESIRIAGDEMDEAIVQYVRETYRVAIG 59
Query: 2191 KDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLF 2250
+ + + ++ + E ++ L G+ + E +
Sbjct: 60 ERTAERVKIEIGNVFPSKE-----NDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVV 114
Query: 2251 RSTLQPVEKALQDAKLDKSA---IHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDE 2307
+ ++ V L+ + + + L GG + + + +LLQ G S+ S P
Sbjct: 115 VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLT 173
Query: 2308 AVAYGAAVQA 2317
AVA GA +
Sbjct: 174 AVAKGAGMVL 183
Score = 39.1 bits (90), Expect = 0.003
Identities = 23/152 (15%), Positives = 40/152 (26%), Gaps = 15/152 (9%)
Query: 1087 DRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDAT 1146
I A DE Q R + R + + E+++
Sbjct: 32 WESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKENDELETTVSGIDL 91
Query: 1147 LKWLDNNTLADKEEYQDKLQQLQKSCMPLMSK------MHGGAGGASAGDMPRGGPTNF- 1199
L E ++ L+ + + + + + G GG +
Sbjct: 92 STGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLR 151
Query: 1200 --------FCGKSLNLSINPDEAVAYGAAVQA 1223
G S+ S P AVA GA +
Sbjct: 152 GLDTLLQKETGISVIRSEEPLTAVAKGAGMVL 183
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM
{Escherichia coli [TaxId: 562]}
Length = 163
Score = 99.2 bits (246), Expect = 3e-24
Identities = 31/194 (15%), Positives = 62/194 (31%), Gaps = 34/194 (17%)
Query: 184 KNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 243
+ L ++LI DLGG T D+S + G L + GD+ LG + + L+
Sbjct: 1 QELDELDSLLIIDLGGTTLDISQV---MGKLSGISKIYGDSSLGVSLVTSAVKDALSLAR 57
Query: 244 KRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEEL 303
SS A I D +I+ +
Sbjct: 58 T---------------------------KGSSYLADDIIIHRKDNNYLKQRINDENKISI 90
Query: 304 CSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSI-- 361
++ L+ +E+ + + + S V+++GG + + ++ +
Sbjct: 91 VTEAMNEALRKLEQRVLNTLNEFSGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTN 148
Query: 362 NPDEAVAYGAAVQA 375
N + G +
Sbjct: 149 NSQYDLVNGMYLIG 162
Score = 99.2 bits (246), Expect = 3e-24
Identities = 31/194 (15%), Positives = 62/194 (31%), Gaps = 34/194 (17%)
Query: 757 KNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 816
+ L ++LI DLGG T D+S + G L + GD+ LG + + L+
Sbjct: 1 QELDELDSLLIIDLGGTTLDISQV---MGKLSGISKIYGDSSLGVSLVTSAVKDALSLAR 57
Query: 817 KRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEEL 876
SS A I D +I+ +
Sbjct: 58 T---------------------------KGSSYLADDIIIHRKDNNYLKQRINDENKISI 90
Query: 877 CSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSI-- 934
++ L+ +E+ + + + S V+++GG + + ++ +
Sbjct: 91 VTEAMNEALRKLEQRVLNTLNEFSGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTN 148
Query: 935 NPDEAVAYGAAVQA 948
N + G +
Sbjct: 149 NSQYDLVNGMYLIG 162
Score = 99.2 bits (246), Expect = 3e-24
Identities = 31/194 (15%), Positives = 62/194 (31%), Gaps = 34/194 (17%)
Query: 1553 KNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 1612
+ L ++LI DLGG T D+S + G L + GD+ LG + + L+
Sbjct: 1 QELDELDSLLIIDLGGTTLDISQV---MGKLSGISKIYGDSSLGVSLVTSAVKDALSLAR 57
Query: 1613 KRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEEL 1672
SS A I D +I+ +
Sbjct: 58 T---------------------------KGSSYLADDIIIHRKDNNYLKQRINDENKISI 90
Query: 1673 CSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSI-- 1730
++ L+ +E+ + + + S V+++GG + + ++ +
Sbjct: 91 VTEAMNEALRKLEQRVLNTLNEFSGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTN 148
Query: 1731 NPDEAVAYGAAVQA 1744
N + G +
Sbjct: 149 NSQYDLVNGMYLIG 162
Score = 99.2 bits (246), Expect = 3e-24
Identities = 31/194 (15%), Positives = 62/194 (31%), Gaps = 34/194 (17%)
Query: 2126 KNLKGERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEF 2185
+ L ++LI DLGG T D+S + G L + GD+ LG + + L+
Sbjct: 1 QELDELDSLLIIDLGGTTLDISQV---MGKLSGISKIYGDSSLGVSLVTSAVKDALSLAR 57
Query: 2186 KRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEEL 2245
SS A I D +I+ +
Sbjct: 58 T---------------------------KGSSYLADDIIIHRKDNNYLKQRINDENKISI 90
Query: 2246 CSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSI-- 2303
++ L+ +E+ + + + S V+++GG + + ++ +
Sbjct: 91 VTEAMNEALRKLEQRVLNTLNEFSGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTN 148
Query: 2304 NPDEAVAYGAAVQA 2317
N + G +
Sbjct: 149 NSQYDLVNGMYLIG 162
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 84
Score = 94.5 bits (235), Expect = 1e-23
Identities = 26/83 (31%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 536 ARNNLEAYVFNVKQALDNA--GNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQ 593
+ LE+Y FN+K +++ K+ + +K + ++C+ + WLD N A+KEE++ + +
Sbjct: 2 GSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQK 61
Query: 594 QLQKSCMPLMSKMHGGAGGASAG 616
+L+K C P+++K++ AGG G
Sbjct: 62 ELEKVCNPIITKLYQSAGGMPGG 84
Score = 94.5 bits (235), Expect = 1e-23
Identities = 26/83 (31%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 1109 ARNNLEAYVFNVKQALDNA--GNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQ 1166
+ LE+Y FN+K +++ K+ + +K + ++C+ + WLD N A+KEE++ + +
Sbjct: 2 GSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQK 61
Query: 1167 QLQKSCMPLMSKMHGGAGGASAG 1189
+L+K C P+++K++ AGG G
Sbjct: 62 ELEKVCNPIITKLYQSAGGMPGG 84
Score = 94.5 bits (235), Expect = 1e-23
Identities = 26/83 (31%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 1905 ARNNLEAYVFNVKQALDNA--GNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQ 1962
+ LE+Y FN+K +++ K+ + +K + ++C+ + WLD N A+KEE++ + +
Sbjct: 2 GSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQK 61
Query: 1963 QLQKSCMPLMSKMHGGAGGASAG 1985
+L+K C P+++K++ AGG G
Sbjct: 62 ELEKVCNPIITKLYQSAGGMPGG 84
Score = 91.0 bits (226), Expect = 2e-22
Identities = 28/85 (32%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 2478 ARNNLEAYVFNVKQALDNA--GNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQ 2535
+ LE+Y FN+K +++ K+ + +K + ++C+ + WLD N A+KEE++ + +
Sbjct: 2 GSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQK 61
Query: 2536 QLQKSCMPLMSKMHGGASAGDMPRG 2560
+L+K C P+++K++ SAG MP G
Sbjct: 62 ELEKVCNPIITKLYQ--SAGGMPGG 84
Score = 39.4 bits (92), Expect = 3e-04
Identities = 11/59 (18%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 1384 ARNNLEAYVFNVKQALDNA--GNKLTESEKSRCREECDAAKNQVAMNPKNT--VFDAKR 1438
+ LE+Y FN+K +++ K+ + +K + ++C+ + + N F+ ++
Sbjct: 2 GSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQ 60
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]}
Length = 97
Score = 92.5 bits (230), Expect = 9e-23
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 508 LSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCR 567
L+++EI +M+ DAE + D + +E + RN + + + ++ ++ AG+KL +K+
Sbjct: 1 LNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE 60
Query: 568 EECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLM 603
A L DK + K+Q+L + LM
Sbjct: 61 SALTALETALKGE---DKAAIEAKMQELAQVSQKLM 93
Score = 92.5 bits (230), Expect = 9e-23
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 1081 LSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCR 1140
L+++EI +M+ DAE + D + +E + RN + + + ++ ++ AG+KL +K+
Sbjct: 1 LNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE 60
Query: 1141 EECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLM 1176
A L DK + K+Q+L + LM
Sbjct: 61 SALTALETALKGE---DKAAIEAKMQELAQVSQKLM 93
Score = 92.5 bits (230), Expect = 9e-23
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 1877 LSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCR 1936
L+++EI +M+ DAE + D + +E + RN + + + ++ ++ AG+KL +K+
Sbjct: 1 LNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE 60
Query: 1937 EECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLM 1972
A L DK + K+Q+L + LM
Sbjct: 61 SALTALETALKGE---DKAAIEAKMQELAQVSQKLM 93
Score = 92.5 bits (230), Expect = 9e-23
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 2450 LSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCR 2509
L+++EI +M+ DAE + D + +E + RN + + + ++ ++ AG+KL +K+
Sbjct: 1 LNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE 60
Query: 2510 EECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLM 2545
A L DK + K+Q+L + LM
Sbjct: 61 SALTALETALKGE---DKAAIEAKMQELAQVSQKLM 93
Score = 71.3 bits (175), Expect = 3e-15
Identities = 17/68 (25%), Positives = 37/68 (54%)
Query: 1356 LSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCR 1415
L+++EI +M+ DAE + D + +E + RN + + + ++ ++ AG+KL +K+
Sbjct: 1 LNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE 60
Query: 1416 EECDAAKN 1423
A +
Sbjct: 61 SALTALET 68
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB
{Thermotoga maritima [TaxId: 2336]}
Length = 137
Score = 89.0 bits (220), Expect = 6e-21
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 4/128 (3%)
Query: 56 VAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEE 115
V + K V + +I +I + + I+ A
Sbjct: 14 VFLRGKGIVVNEPSVIAIDSTTGEILKVGLEAKNMIGKTP--ATIKAIRPMRDGVIADYT 71
Query: 116 ISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTA 175
++ ++L A+ + VI VP D +R+A DAG AG + + ++ EP A
Sbjct: 72 VALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMA 131
Query: 176 AALAYGLD 183
AA+ G +
Sbjct: 132 AAI--GSN 137
Score = 89.0 bits (220), Expect = 6e-21
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 4/128 (3%)
Query: 629 VAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEE 688
V + K V + +I +I + + I+ A
Sbjct: 14 VFLRGKGIVVNEPSVIAIDSTTGEILKVGLEAKNMIGKTP--ATIKAIRPMRDGVIADYT 71
Query: 689 ISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTA 748
++ ++L A+ + VI VP D +R+A DAG AG + + ++ EP A
Sbjct: 72 VALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMA 131
Query: 749 AALAYGLD 756
AA+ G +
Sbjct: 132 AAI--GSN 137
Score = 89.0 bits (220), Expect = 6e-21
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 4/128 (3%)
Query: 1425 VAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEE 1484
V + K V + +I +I + + I+ A
Sbjct: 14 VFLRGKGIVVNEPSVIAIDSTTGEILKVGLEAKNMIGKTP--ATIKAIRPMRDGVIADYT 71
Query: 1485 ISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTA 1544
++ ++L A+ + VI VP D +R+A DAG AG + + ++ EP A
Sbjct: 72 VALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMA 131
Query: 1545 AALAYGLD 1552
AA+ G +
Sbjct: 132 AAI--GSN 137
Score = 89.0 bits (220), Expect = 6e-21
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 4/128 (3%)
Query: 1998 VAMNPKNTVFDAKRLIGRKFDDPKIQQDMKHWPFTVVNDCSKPKIQVEFKGERKTFAPEE 2057
V + K V + +I +I + + I+ A
Sbjct: 14 VFLRGKGIVVNEPSVIAIDSTTGEILKVGLEAKNMIGKTP--ATIKAIRPMRDGVIADYT 71
Query: 2058 ISSMVLTKMKETAEAYLGHSVRDAVITVPAYFNDAQRQATKDAGAIAGLNVMRIVNEPTA 2117
++ ++L A+ + VI VP D +R+A DAG AG + + ++ EP A
Sbjct: 72 VALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMA 131
Query: 2118 AALAYGLD 2125
AA+ G +
Sbjct: 132 AAI--GSN 137
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 161
Score = 86.7 bits (214), Expect = 7e-20
Identities = 24/183 (13%), Positives = 58/183 (31%), Gaps = 35/183 (19%)
Query: 189 ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYK 248
++ D+G T DV +++ + V + +G D + L +A+E
Sbjct: 5 PGYGVVIDVGSRTTDVLTINL--MDMEPVVELSFSLQIGVGDAISALSRKIAKETGFVVP 62
Query: 249 KDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLF 308
D+ A+ A + + ++S E+L + +
Sbjct: 63 FDL-------------AQEALSHPVMFRQKQVGG----------PEVSGPILEDLANRII 99
Query: 309 RSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSI-NPDEAV 367
+ + + + ++ VGG + + + + G + + + A
Sbjct: 100 ENIRLNLRGEVDR-------VTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFAN 150
Query: 368 AYG 370
A G
Sbjct: 151 ALG 153
Score = 86.7 bits (214), Expect = 7e-20
Identities = 24/183 (13%), Positives = 58/183 (31%), Gaps = 35/183 (19%)
Query: 762 ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYK 821
++ D+G T DV +++ + V + +G D + L +A+E
Sbjct: 5 PGYGVVIDVGSRTTDVLTINL--MDMEPVVELSFSLQIGVGDAISALSRKIAKETGFVVP 62
Query: 822 KDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLF 881
D+ A+ A + + ++S E+L + +
Sbjct: 63 FDL-------------AQEALSHPVMFRQKQVGG----------PEVSGPILEDLANRII 99
Query: 882 RSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSI-NPDEAV 940
+ + + + ++ VGG + + + + G + + + A
Sbjct: 100 ENIRLNLRGEVDR-------VTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFAN 150
Query: 941 AYG 943
A G
Sbjct: 151 ALG 153
Score = 86.7 bits (214), Expect = 7e-20
Identities = 24/183 (13%), Positives = 58/183 (31%), Gaps = 35/183 (19%)
Query: 1558 ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYK 1617
++ D+G T DV +++ + V + +G D + L +A+E
Sbjct: 5 PGYGVVIDVGSRTTDVLTINL--MDMEPVVELSFSLQIGVGDAISALSRKIAKETGFVVP 62
Query: 1618 KDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLF 1677
D+ A+ A + + ++S E+L + +
Sbjct: 63 FDL-------------AQEALSHPVMFRQKQVGG----------PEVSGPILEDLANRII 99
Query: 1678 RSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSI-NPDEAV 1736
+ + + + ++ VGG + + + + G + + + A
Sbjct: 100 ENIRLNLRGEVDR-------VTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFAN 150
Query: 1737 AYG 1739
A G
Sbjct: 151 ALG 153
Score = 86.7 bits (214), Expect = 7e-20
Identities = 24/183 (13%), Positives = 58/183 (31%), Gaps = 35/183 (19%)
Query: 2131 ERNVLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYK 2190
++ D+G T DV +++ + V + +G D + L +A+E
Sbjct: 5 PGYGVVIDVGSRTTDVLTINL--MDMEPVVELSFSLQIGVGDAISALSRKIAKETGFVVP 62
Query: 2191 KDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLF 2250
D+ A+ A + + ++S E+L + +
Sbjct: 63 FDL-------------AQEALSHPVMFRQKQVGG----------PEVSGPILEDLANRII 99
Query: 2251 RSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFFCGKSLNLSI-NPDEAV 2309
+ + + + ++ VGG + + + + G + + + A
Sbjct: 100 ENIRLNLRGEVDR-------VTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFAN 150
Query: 2310 AYG 2312
A G
Sbjct: 151 ALG 153
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66)
{Escherichia coli [TaxId: 562]}
Length = 112
Score = 81.5 bits (201), Expect = 1e-18
Identities = 17/117 (14%), Positives = 44/117 (37%), Gaps = 5/117 (4%)
Query: 2450 LSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCR 2509
L+ EI MI D+ Y ++D + + + + ++ AL L+ +E+
Sbjct: 1 LTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVID 60
Query: 2510 EECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGASAGDMPRGGPTVEE 2566
+ + + D + + ++ + K ++ + + G +V+E
Sbjct: 61 DAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQSVRRAL--KGHSVDE 112
Score = 81.1 bits (200), Expect = 2e-18
Identities = 14/103 (13%), Positives = 38/103 (36%), Gaps = 3/103 (2%)
Query: 508 LSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCR 567
L+ EI MI D+ Y ++D + + + + ++ AL L+ +E+
Sbjct: 1 LTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVID 60
Query: 568 EECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGA 610
+ + + D + + ++ + K ++ +
Sbjct: 61 DAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQS 100
Score = 81.1 bits (200), Expect = 2e-18
Identities = 14/103 (13%), Positives = 38/103 (36%), Gaps = 3/103 (2%)
Query: 1081 LSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCR 1140
L+ EI MI D+ Y ++D + + + + ++ AL L+ +E+
Sbjct: 1 LTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVID 60
Query: 1141 EECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGA 1183
+ + + D + + ++ + K ++ +
Sbjct: 61 DAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQS 100
Score = 81.1 bits (200), Expect = 2e-18
Identities = 14/103 (13%), Positives = 38/103 (36%), Gaps = 3/103 (2%)
Query: 1877 LSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCR 1936
L+ EI MI D+ Y ++D + + + + ++ AL L+ +E+
Sbjct: 1 LTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVID 60
Query: 1937 EECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGA 1979
+ + + D + + ++ + K ++ +
Sbjct: 61 DAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQS 100
Score = 61.8 bits (150), Expect = 1e-11
Identities = 12/68 (17%), Positives = 26/68 (38%)
Query: 1356 LSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCR 1415
L+ EI MI D+ Y ++D + + + + ++ AL L+ +E+
Sbjct: 1 LTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVID 60
Query: 1416 EECDAAKN 1423
+
Sbjct: 61 DAAAHLSE 68
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga
maritima [TaxId: 2336]}
Length = 191
Score = 39.9 bits (92), Expect = 0.001
Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 22/170 (12%)
Query: 187 KGERN--VLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDF--DNRLVSHLAEE 242
E++ V++ +LG + G ++ +G + D V + E
Sbjct: 2 TPEKDRGVVVVNLGYNFTGLIAYK--NGVPIKISY----VPVGMKHVIKDVSAVLDTSFE 55
Query: 243 FKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEE 302
+ A+ E R L +T + L I AR E
Sbjct: 56 ESERLIITHGN---AVYNDLKEEEIQYRGLDGNTIKTTTAKKLSVII-------HARLRE 105
Query: 303 LCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFF 352
+ S + + VE + + VVL GG +IP++ L F
Sbjct: 106 IMSKSKK-FFREVEAKIVEEGEIG-IPGGVVLTGGGAKIPRINELATEVF 153
Score = 39.9 bits (92), Expect = 0.001
Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 22/170 (12%)
Query: 760 KGERN--VLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDF--DNRLVSHLAEE 815
E++ V++ +LG + G ++ +G + D V + E
Sbjct: 2 TPEKDRGVVVVNLGYNFTGLIAYK--NGVPIKISY----VPVGMKHVIKDVSAVLDTSFE 55
Query: 816 FKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEE 875
+ A+ E R L +T + L I AR E
Sbjct: 56 ESERLIITHGN---AVYNDLKEEEIQYRGLDGNTIKTTTAKKLSVII-------HARLRE 105
Query: 876 LCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFF 925
+ S + + VE + + VVL GG +IP++ L F
Sbjct: 106 IMSKSKK-FFREVEAKIVEEGEIG-IPGGVVLTGGGAKIPRINELATEVF 153
Score = 39.9 bits (92), Expect = 0.001
Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 22/170 (12%)
Query: 1556 KGERN--VLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDF--DNRLVSHLAEE 1611
E++ V++ +LG + G ++ +G + D V + E
Sbjct: 2 TPEKDRGVVVVNLGYNFTGLIAYK--NGVPIKISY----VPVGMKHVIKDVSAVLDTSFE 55
Query: 1612 FKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEE 1671
+ A+ E R L +T + L I AR E
Sbjct: 56 ESERLIITHGN---AVYNDLKEEEIQYRGLDGNTIKTTTAKKLSVII-------HARLRE 105
Query: 1672 LCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFF 1721
+ S + + VE + + VVL GG +IP++ L F
Sbjct: 106 IMSKSKK-FFREVEAKIVEEGEIG-IPGGVVLTGGGAKIPRINELATEVF 153
Score = 39.9 bits (92), Expect = 0.001
Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 22/170 (12%)
Query: 2129 KGERN--VLIFDLGGGTFDVSILSIDEGALFEVRSTAGDTHLGGEDF--DNRLVSHLAEE 2184
E++ V++ +LG + G ++ +G + D V + E
Sbjct: 2 TPEKDRGVVVVNLGYNFTGLIAYK--NGVPIKISY----VPVGMKHVIKDVSAVLDTSFE 55
Query: 2185 FKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEASIEIDALYDGIDFYTKISRARFEE 2244
+ A+ E R L +T + L I AR E
Sbjct: 56 ESERLIITHGN---AVYNDLKEEEIQYRGLDGNTIKTTTAKKLSVII-------HARLRE 105
Query: 2245 LCSDLFRSTLQPVEKALQDAKLDKSAIHDVVLVGGSTRIPKVQSLLQNFF 2294
+ S + + VE + + VVL GG +IP++ L F
Sbjct: 106 IMSKSKK-FFREVEAKIVEEGEIG-IPGGVVLTGGGAKIPRINELATEVF 153
>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 217
Score = 32.3 bits (73), Expect = 0.47
Identities = 14/89 (15%), Positives = 34/89 (38%), Gaps = 11/89 (12%)
Query: 517 INDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKW 576
IND ++K E E ++ + ++Q +S++ R+ +
Sbjct: 13 INDWRKFKLESEDGDSIPPSKKEI------LRQMSSPQSRDDKDSKERMSRKMSIQEYE- 65
Query: 577 LDNNTLADKEEYQDKLQQLQKSCMPLMSK 605
+ +E + L++ ++ CM M +
Sbjct: 66 ----LIHQDKEDEGCLRKYRRQCMQDMHQ 90
Score = 32.3 bits (73), Expect = 0.47
Identities = 14/89 (15%), Positives = 34/89 (38%), Gaps = 11/89 (12%)
Query: 1090 INDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKW 1149
IND ++K E E ++ + ++Q +S++ R+ +
Sbjct: 13 INDWRKFKLESEDGDSIPPSKKEI------LRQMSSPQSRDDKDSKERMSRKMSIQEYE- 65
Query: 1150 LDNNTLADKEEYQDKLQQLQKSCMPLMSK 1178
+ +E + L++ ++ CM M +
Sbjct: 66 ----LIHQDKEDEGCLRKYRRQCMQDMHQ 90
Score = 32.3 bits (73), Expect = 0.47
Identities = 14/89 (15%), Positives = 34/89 (38%), Gaps = 11/89 (12%)
Query: 1886 INDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKW 1945
IND ++K E E ++ + ++Q +S++ R+ +
Sbjct: 13 INDWRKFKLESEDGDSIPPSKKEI------LRQMSSPQSRDDKDSKERMSRKMSIQEYE- 65
Query: 1946 LDNNTLADKEEYQDKLQQLQKSCMPLMSK 1974
+ +E + L++ ++ CM M +
Sbjct: 66 ----LIHQDKEDEGCLRKYRRQCMQDMHQ 90
Score = 32.3 bits (73), Expect = 0.47
Identities = 14/89 (15%), Positives = 34/89 (38%), Gaps = 11/89 (12%)
Query: 2459 INDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKW 2518
IND ++K E E ++ + ++Q +S++ R+ +
Sbjct: 13 INDWRKFKLESEDGDSIPPSKKEI------LRQMSSPQSRDDKDSKERMSRKMSIQEYE- 65
Query: 2519 LDNNTLADKEEYQDKLQQLQKSCMPLMSK 2547
+ +E + L++ ++ CM M +
Sbjct: 66 ----LIHQDKEDEGCLRKYRRQCMQDMHQ 90
>d1irud_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 243
Score = 31.5 bits (71), Expect = 1.1
Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 487 TAKDTSSGKSQNI---TIKNDKG--RLSKEEIDRMINDAERYKDEDERQKE 532
+ +NI ++ D+ L+ EEI++ + + E+ K+E+E++K+
Sbjct: 193 ALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKYVAEIEKEKEENEKKKQ 243
Score = 31.5 bits (71), Expect = 1.1
Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 1060 TAKDTSSGKSQNI---TIKNDKG--RLSKEEIDRMINDAERYKDEDERQKE 1105
+ +NI ++ D+ L+ EEI++ + + E+ K+E+E++K+
Sbjct: 193 ALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKYVAEIEKEKEENEKKKQ 243
Score = 31.5 bits (71), Expect = 1.1
Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 1335 TAKDTSSGKSQNI---TIKNDKG--RLSKEEIDRMINDAERYKDEDERQKE 1380
+ +NI ++ D+ L+ EEI++ + + E+ K+E+E++K+
Sbjct: 193 ALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKYVAEIEKEKEENEKKKQ 243
Score = 31.5 bits (71), Expect = 1.1
Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 1856 TAKDTSSGKSQNI---TIKNDKG--RLSKEEIDRMINDAERYKDEDERQKE 1901
+ +NI ++ D+ L+ EEI++ + + E+ K+E+E++K+
Sbjct: 193 ALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKYVAEIEKEKEENEKKKQ 243
Score = 31.5 bits (71), Expect = 1.1
Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 2429 TAKDTSSGKSQNI---TIKNDKG--RLSKEEIDRMINDAERYKDEDERQKE 2474
+ +NI ++ D+ L+ EEI++ + + E+ K+E+E++K+
Sbjct: 193 ALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKYVAEIEKEKEENEKKKQ 243
>d1zlqa1 c.94.1.1 (A:3-501) Nickel-binding periplasmic protein NikA
{Escherichia coli [TaxId: 562]}
Length = 499
Score = 31.7 bits (70), Expect = 1.4
Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 6/55 (10%)
Query: 477 DLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQK 531
D + L+ + + +G K ID+ I + DE +RQ
Sbjct: 399 PYDPHAFLSSMRVPSHADFQAQ------QGLADKPLIDKEIGEVLATHDETQRQA 447
Score = 31.7 bits (70), Expect = 1.4
Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 6/55 (10%)
Query: 1050 DLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQK 1104
D + L+ + + +G K ID+ I + DE +RQ
Sbjct: 399 PYDPHAFLSSMRVPSHADFQAQ------QGLADKPLIDKEIGEVLATHDETQRQA 447
Score = 31.7 bits (70), Expect = 1.4
Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 6/55 (10%)
Query: 1325 DLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQK 1379
D + L+ + + +G K ID+ I + DE +RQ
Sbjct: 399 PYDPHAFLSSMRVPSHADFQAQ------QGLADKPLIDKEIGEVLATHDETQRQA 447
Score = 31.7 bits (70), Expect = 1.4
Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 6/55 (10%)
Query: 1846 DLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQK 1900
D + L+ + + +G K ID+ I + DE +RQ
Sbjct: 399 PYDPHAFLSSMRVPSHADFQAQ------QGLADKPLIDKEIGEVLATHDETQRQA 447
Score = 31.7 bits (70), Expect = 1.4
Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 6/55 (10%)
Query: 2419 DLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQK 2473
D + L+ + + +G K ID+ I + DE +RQ
Sbjct: 399 PYDPHAFLSSMRVPSHADFQAQ------QGLADKPLIDKEIGEVLATHDETQRQA 447
>d2d0oa3 c.55.1.6 (A:404-606) Diol dehydratase-reactivating factor
large subunit DdrA {Klebsiella oxytoca [TaxId: 571]}
Length = 203
Score = 29.8 bits (67), Expect = 3.5
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Query: 194 IFDLGGGTFDVSILSIDEGALFEVRSTAGD-------THLGGEDFDNRLVSHLAEEFKR 245
I DLG G+ D SI++ + + AGD LG ED +LAEE K+
Sbjct: 8 ILDLGAGSTDASIINPKGDIIATHLAGAGDMVTMIIARELGLEDR------YLAEEIKK 60
Score = 29.8 bits (67), Expect = 3.5
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Query: 767 IFDLGGGTFDVSILSIDEGALFEVRSTAGD-------THLGGEDFDNRLVSHLAEEFKR 818
I DLG G+ D SI++ + + AGD LG ED +LAEE K+
Sbjct: 8 ILDLGAGSTDASIINPKGDIIATHLAGAGDMVTMIIARELGLEDR------YLAEEIKK 60
Score = 29.8 bits (67), Expect = 3.5
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Query: 1563 IFDLGGGTFDVSILSIDEGALFEVRSTAGD-------THLGGEDFDNRLVSHLAEEFKR 1614
I DLG G+ D SI++ + + AGD LG ED +LAEE K+
Sbjct: 8 ILDLGAGSTDASIINPKGDIIATHLAGAGDMVTMIIARELGLEDR------YLAEEIKK 60
Score = 29.8 bits (67), Expect = 3.5
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Query: 2136 IFDLGGGTFDVSILSIDEGALFEVRSTAGD-------THLGGEDFDNRLVSHLAEEFKR 2187
I DLG G+ D SI++ + + AGD LG ED +LAEE K+
Sbjct: 8 ILDLGAGSTDASIINPKGDIIATHLAGAGDMVTMIIARELGLEDR------YLAEEIKK 60
>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol
dehydratase reactivase alpha subunit {Klebsiella
pneumoniae [TaxId: 573]}
Length = 202
Score = 29.0 bits (65), Expect = 5.2
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 21/63 (33%)
Query: 194 IFDLGGGTFDVSILSIDEGALFEVRST----AGD-------THLGGEDFDNRLVSHLAEE 242
I DLG G+ D +I++ + ++ + AG+ T LG ED LAE
Sbjct: 8 ILDLGAGSTDAAIVNAEG----QITAVHLAGAGNMVSLLIKTELGLEDL------SLAEA 57
Query: 243 FKR 245
K+
Sbjct: 58 IKK 60
Score = 29.0 bits (65), Expect = 5.2
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 21/63 (33%)
Query: 767 IFDLGGGTFDVSILSIDEGALFEVRST----AGD-------THLGGEDFDNRLVSHLAEE 815
I DLG G+ D +I++ + ++ + AG+ T LG ED LAE
Sbjct: 8 ILDLGAGSTDAAIVNAEG----QITAVHLAGAGNMVSLLIKTELGLEDL------SLAEA 57
Query: 816 FKR 818
K+
Sbjct: 58 IKK 60
Score = 29.0 bits (65), Expect = 5.2
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 21/63 (33%)
Query: 1563 IFDLGGGTFDVSILSIDEGALFEVRST----AGD-------THLGGEDFDNRLVSHLAEE 1611
I DLG G+ D +I++ + ++ + AG+ T LG ED LAE
Sbjct: 8 ILDLGAGSTDAAIVNAEG----QITAVHLAGAGNMVSLLIKTELGLEDL------SLAEA 57
Query: 1612 FKR 1614
K+
Sbjct: 58 IKK 60
Score = 29.0 bits (65), Expect = 5.2
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 21/63 (33%)
Query: 2136 IFDLGGGTFDVSILSIDEGALFEVRST----AGD-------THLGGEDFDNRLVSHLAEE 2184
I DLG G+ D +I++ + ++ + AG+ T LG ED LAE
Sbjct: 8 ILDLGAGSTDAAIVNAEG----QITAVHLAGAGNMVSLLIKTELGLEDL------SLAEA 57
Query: 2185 FKR 2187
K+
Sbjct: 58 IKK 60
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.131 0.367
Gapped
Lambda K H
0.267 0.0461 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 9,020,709
Number of extensions: 435247
Number of successful extensions: 1470
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1422
Number of HSP's successfully gapped: 99
Length of query: 2568
Length of database: 2,407,596
Length adjustment: 101
Effective length of query: 2467
Effective length of database: 1,020,866
Effective search space: 2518476422
Effective search space used: 2518476422
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (27.9 bits)