RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7645
(418 letters)
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 159
Score = 234 bits (597), Expect = 4e-77
Identities = 118/159 (74%), Positives = 143/159 (89%)
Query: 172 SSAIQDVLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFE 231
S +QD+LL+DVTPLSLGIETAGGVMT LI+RNT IP KQTQTFTTY+DNQP V IQV+E
Sbjct: 1 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 60
Query: 232 GERAMTKDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIK 291
GERAMTKDNNLLG F+LTGIPPAPRGVP+I+VTFD+DANGILNV+A D S+GK ITI
Sbjct: 61 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 120
Query: 292 NDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLE 330
NDKGRLSKE+I+RM+ +AE+YK EDE+Q++++S++N+LE
Sbjct: 121 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 159
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase
fragment {Cow (Bos taurus) [TaxId: 9913]}
Length = 193
Score = 219 bits (558), Expect = 1e-70
Identities = 135/168 (80%), Positives = 151/168 (89%)
Query: 1 GALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRT 60
+FEV+STAGDTHLGGEDFDNR+V+H EFKRK+KKD+S N RA+RRLRTA ERAKRT
Sbjct: 26 DGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRT 85
Query: 61 LSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHD 120
LSSST+ASIEID+LY+GIDFYT I+RARFEEL +DLFR TL PVEKAL+DAKLDKS IHD
Sbjct: 86 LSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHD 145
Query: 121 VVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 168
+VLVGGSTRIPK+Q LLQ+FF GK LN SINPDEAVAYGAAVQAAILS
Sbjct: 146 IVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILS 193
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase
fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Length = 198
Score = 217 bits (553), Expect = 9e-70
Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 5/169 (2%)
Query: 4 FEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSS 63
FEV +T GDTHLGGEDFD+RL+++L EEFK+ D+ +P A++RL+ AAE+AK LSS
Sbjct: 31 FEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSS 90
Query: 64 STEASIEIDALYDGI----DFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIH 119
+ + + + + K++RA+ E L DL +++ ++ ALQDA L S I
Sbjct: 91 AQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDID 150
Query: 120 DVVLVGGSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQAAILS 168
DV+LVGG TR+P VQ + FF GK +NPDEAVA GAAVQ +L+
Sbjct: 151 DVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLT 198
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]}
Length = 118
Score = 189 bits (481), Expect = 3e-60
Identities = 76/118 (64%), Positives = 91/118 (77%)
Query: 178 VLLVDVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMT 237
VLL+DVTPLSLGIET GGVMT LI +NT IP K +Q F+T DNQ AV+I V +GER
Sbjct: 1 VLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRA 60
Query: 238 KDNNLLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 295
DN LG F+L GI PAPRG+P+I+VTFD+DA+GIL+V+AKD +SGK Q ITIK G
Sbjct: 61 ADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 118
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66)
{Escherichia coli [TaxId: 562]}
Length = 115
Score = 166 bits (421), Expect = 2e-51
Identities = 55/114 (48%), Positives = 74/114 (64%)
Query: 182 DVTPLSLGIETAGGVMTKLIERNTRIPCKQTQTFTTYADNQPAVTIQVFEGERAMTKDNN 241
DV PLSLG+ET GG++ K+I RNT IP + Q FTT+ D Q A++I V +GER + +D
Sbjct: 2 DVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCR 61
Query: 242 LLGTFDLTGIPPAPRGVPKIDVTFDLDANGILNVTAKDTSSGKSQNITIKNDKG 295
L F L GIP P G I VTF +DA+G+L+VTA + S+G +I +K G
Sbjct: 62 SLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYG 115
>d1ud0a_ a.8.4.1 (A:) DnaK {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 84
Score = 94.1 bits (234), Expect = 2e-24
Identities = 26/83 (31%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 325 ARNNLEAYVFNVKQALDNA--GNKLTESEKSRCREECDATLKWLDNNTLADKEEYQDKLQ 382
+ LE+Y FN+K +++ K+ + +K + ++C+ + WLD N A+KEE++ + +
Sbjct: 2 GSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQK 61
Query: 383 QLQKSCMPLMSKMHGGAGGASAG 405
+L+K C P+++K++ AGG G
Sbjct: 62 ELEKVCNPIITKLYQSAGGMPGG 84
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]}
Length = 97
Score = 91.7 bits (228), Expect = 2e-23
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 297 LSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCR 356
L+++EI +M+ DAE + D + +E + RN + + + ++ ++ AG+KL +K+
Sbjct: 1 LNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE 60
Query: 357 EECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLM 392
A L DK + K+Q+L + LM
Sbjct: 61 SALTALETALKGE---DKAAIEAKMQELAQVSQKLM 93
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB
{Thermotoga maritima [TaxId: 2336]}
Length = 196
Score = 84.6 bits (208), Expect = 9e-20
Identities = 26/159 (16%), Positives = 58/159 (36%), Gaps = 9/159 (5%)
Query: 9 TAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRTLSSSTEAS 68
T + G++ D +V ++ E ++ + + + ++ + E +
Sbjct: 31 TWESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKE-----NDELETT 85
Query: 69 IEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSA---IHDVVLVG 125
+ L G+ + E + + ++ V L+ + + + L G
Sbjct: 86 VSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTG 145
Query: 126 GSTRIPKVQSLLQNFFCGKSLNLSINPDEAVAYGAAVQA 164
G + + + +LLQ G S+ S P AVA GA +
Sbjct: 146 GGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVL 183
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66)
{Escherichia coli [TaxId: 562]}
Length = 112
Score = 80.3 bits (198), Expect = 4e-19
Identities = 14/103 (13%), Positives = 38/103 (36%), Gaps = 3/103 (2%)
Query: 297 LSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCR 356
L+ EI MI D+ Y ++D + + + + ++ AL L+ +E+
Sbjct: 1 LTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVID 60
Query: 357 EECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLMSKMHGGA 399
+ + + D + + ++ + K ++ +
Sbjct: 61 DAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQS 100
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM
{Escherichia coli [TaxId: 562]}
Length = 163
Score = 67.2 bits (163), Expect = 5e-14
Identities = 21/166 (12%), Positives = 47/166 (28%), Gaps = 31/166 (18%)
Query: 1 GALFEVRSTAGDTHLGGEDFDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTAAERAKRT 60
G L + GD+ LG + + L+
Sbjct: 26 GKLSGISKIYGDSSLGVSLVTSAVKDALSLART--------------------------- 58
Query: 61 LSSSTEASIEIDALYDGIDFYTKISRARFEELCSDLFRSTLQPVEKALQDAKLDKSAIHD 120
SS A I D +I+ + ++ L+ +E+ + + + S
Sbjct: 59 KGSSYLADDIIIHRKDNNYLKQRINDENKISIVTEAMNEALRKLEQRVLNTLNEFSGYTH 118
Query: 121 VVLVGGSTRIPKVQSLLQNFFCGKSLNLSI--NPDEAVAYGAAVQA 164
V+++GG + + ++ + N + G +
Sbjct: 119 VMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 162
>d2trcp_ c.47.1.6 (P:) Phosducin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 217
Score = 32.3 bits (73), Expect = 0.065
Identities = 14/89 (15%), Positives = 34/89 (38%), Gaps = 11/89 (12%)
Query: 306 INDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKW 365
IND ++K E E ++ + ++Q +S++ R+ +
Sbjct: 13 INDWRKFKLESEDGDSIPPSKKEI------LRQMSSPQSRDDKDSKERMSRKMSIQEYE- 65
Query: 366 LDNNTLADKEEYQDKLQQLQKSCMPLMSK 394
+ +E + L++ ++ CM M +
Sbjct: 66 ----LIHQDKEDEGCLRKYRRQCMQDMHQ 90
>d1zlqa1 c.94.1.1 (A:3-501) Nickel-binding periplasmic protein NikA
{Escherichia coli [TaxId: 562]}
Length = 499
Score = 32.1 bits (71), Expect = 0.12
Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 6/55 (10%)
Query: 266 DLDANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQK 320
D + L+ + + +G K ID+ I + DE +RQ
Sbjct: 399 PYDPHAFLSSMRVPSHADFQAQ------QGLADKPLIDKEIGEVLATHDETQRQA 447
>d1irud_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 243
Score = 31.5 bits (71), Expect = 0.13
Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 276 TAKDTSSGKSQNI---TIKNDKG--RLSKEEIDRMINDAERYKDEDERQKE 321
+ +NI ++ D+ L+ EEI++ + + E+ K+E+E++K+
Sbjct: 193 ALLEVVQSGGKNIELAVMRRDQSLKILNPEEIEKYVAEIEKEKEENEKKKQ 243
>d1vr5a1 c.94.1.1 (A:23-557) Oligo-peptide binding protein (OPPA)
{Thermotoga maritima [TaxId: 2336]}
Length = 535
Score = 30.5 bits (67), Expect = 0.39
Identities = 9/51 (17%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Query: 270 NGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQK 320
NG+ A ++ S N G+ + E++ ++++ R D+ + ++
Sbjct: 425 NGVFYPDAVESEYSYSGNF------GKYANPEVETLLDELNRSNDDAKIKE 469
>d1xoca1 c.94.1.1 (A:17-520) Oligo-peptide binding protein (OPPA)
{Bacillus subtilis [TaxId: 1423]}
Length = 504
Score = 28.9 bits (63), Expect = 1.3
Identities = 8/36 (22%), Positives = 14/36 (38%)
Query: 285 SQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQK 320
S I + E D+++ DA+ D + K
Sbjct: 417 SSQIKKGLNYVWYKNAEADKLMKDAKSISDRKQYSK 452
>d1duvg1 c.78.1.1 (G:1-150) Ornithine transcarbamoylase {Escherichia
coli [TaxId: 562]}
Length = 150
Score = 27.9 bits (61), Expect = 1.6
Identities = 5/31 (16%), Positives = 13/31 (41%)
Query: 297 LSKEEIDRMINDAERYKDEDERQKERISARN 327
+ E++ ++ A + K + + KE
Sbjct: 14 FTPAELNSLLQLAAKLKADKKSGKEEAKLTG 44
>d1dpea_ c.94.1.1 (A:) Dipeptide-binding protein {Escherichia coli
[TaxId: 562]}
Length = 507
Score = 28.6 bits (62), Expect = 1.7
Identities = 7/53 (13%), Positives = 17/53 (32%), Gaps = 6/53 (11%)
Query: 268 DANGILNVTAKDTSSGKSQNITIKNDKGRLSKEEIDRMINDAERYKDEDERQK 320
D + +S + N + + + +I A D ++R +
Sbjct: 411 DPDNFFATEFSCAASEQGSNY------SKWCYKPFEDLIQPARATDDHNKRVE 457
>d1dxha1 c.78.1.1 (A:1-150) Ornithine transcarbamoylase {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 150
Score = 27.5 bits (60), Expect = 2.0
Identities = 6/38 (15%), Positives = 14/38 (36%)
Query: 297 LSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVF 334
S E+ +++ + K E+ + A +F
Sbjct: 15 HSTRELRYLLDLSRDLKRAKYTGTEQQHLKRKNIALIF 52
>d1uqwa_ c.94.1.1 (A:) Hypothetical protein YliB {Escherichia coli
[TaxId: 562]}
Length = 487
Score = 28.2 bits (61), Expect = 2.2
Identities = 5/26 (19%), Positives = 12/26 (46%)
Query: 295 GRLSKEEIDRMINDAERYKDEDERQK 320
S +++D + A + D E+ +
Sbjct: 412 AFYSNKQVDDFLAQALKTNDPAEKTR 437
>d1jeta_ c.94.1.1 (A:) Oligo-peptide binding protein (OPPA)
{Salmonella typhimurium [TaxId: 90371]}
Length = 517
Score = 28.1 bits (61), Expect = 2.3
Identities = 6/29 (20%), Positives = 13/29 (44%)
Query: 292 NDKGRLSKEEIDRMINDAERYKDEDERQK 320
N+ D++I D + D+ +R +
Sbjct: 436 NNTAHYKSPAFDKLIADTLKVADDTQRSE 464
>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica)
[TaxId: 5759]}
Length = 134
Score = 27.0 bits (58), Expect = 2.6
Identities = 15/102 (14%), Positives = 32/102 (31%)
Query: 291 KNDKGRLSKEEIDRMINDAERYKDEDERQKERISARNNLEAYVFNVKQALDNAGNKLTES 350
N G +S EE+ ++ K+E Q S + + + A + +
Sbjct: 11 VNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDL 70
Query: 351 EKSRCREECDATLKWLDNNTLADKEEYQDKLQQLQKSCMPLM 392
+ + L +D + KEE ++ +
Sbjct: 71 SDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQ 112
>d1ml4a1 c.78.1.1 (A:2-151) Aspartate carbamoyltransferase catalytic
subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Length = 150
Score = 26.7 bits (58), Expect = 3.3
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 297 LSKEEIDRMINDAERYKDEDERQKE 321
SKE+I+ ++ AER + E + + +
Sbjct: 13 FSKEDIETVLATAERLERELKEKGQ 37
>d1pvva1 c.78.1.1 (A:1-150) Ornithine transcarbamoylase {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 150
Score = 26.5 bits (58), Expect = 3.5
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 297 LSKEEIDRMINDAERYKDEDERQKE 321
+ EEI ++ A+ +K + K
Sbjct: 15 YTAEEIWTILETAKMFKIWQKIGKP 39
>d1qsda_ a.7.5.1 (A:) Tubulin chaperone cofactor A {Baker's yeast
(Saccharomyces cerevisiae), Rbl2p [TaxId: 4932]}
Length = 102
Score = 25.8 bits (57), Expect = 4.1
Identities = 11/91 (12%), Positives = 34/91 (37%), Gaps = 12/91 (13%)
Query: 304 RMINDAERYKDEDERQKERI-SARNNLEAYVFNVKQALDNAGNKLTESE------KSRCR 356
R+ + Y+ E + Q+ + + + +++K+ L +++ + R
Sbjct: 12 RLTKEEGYYQQELKDQEAHVAKLKEDKSVDPYDLKKQE----EVLDDTKRLLPTLYEKIR 67
Query: 357 EECDATLKWL-DNNTLADKEEYQDKLQQLQK 386
E + ++L D + + + Q+
Sbjct: 68 EFKEDLEQFLKTYQGTEDVSDARSAITSAQE 98
>d1vlva1 c.78.1.1 (A:1-152) Ornithine transcarbamoylase {Thermotoga
maritima [TaxId: 2336]}
Length = 152
Score = 26.3 bits (57), Expect = 4.5
Identities = 6/24 (25%), Positives = 14/24 (58%)
Query: 297 LSKEEIDRMINDAERYKDEDERQK 320
S EEI +++ +++ K E+ +
Sbjct: 16 FSPEEIRYLLDISKQVKMENRSKL 39
>d1ekxa1 c.78.1.1 (A:1-150) Aspartate carbamoyltransferase catalytic
subunit {Escherichia coli [TaxId: 562]}
Length = 150
Score = 26.3 bits (57), Expect = 4.5
Identities = 4/23 (17%), Positives = 14/23 (60%)
Query: 297 LSKEEIDRMINDAERYKDEDERQ 319
LS+++++ ++ A + K + +
Sbjct: 15 LSRDDLNLVLATAAKLKANPQPE 37
>d1nx4a_ b.82.2.8 (A:) Carbapenem synthase, CarC {Erwinia carotovora
[TaxId: 554]}
Length = 271
Score = 26.6 bits (58), Expect = 6.0
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 6/34 (17%)
Query: 20 FDNRLVSHLAEEFKRKYKKDMSVNPRALRRLRTA 53
DNR V H EEF + R L R +TA
Sbjct: 243 MDNRRVIHEREEF------NDDDIVRRLYRGQTA 270
>d1vcva1 c.1.10.1 (A:1-226) Deoxyribose-phosphate aldolase DeoC
{Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Length = 226
Score = 26.2 bits (57), Expect = 7.8
Identities = 10/100 (10%), Positives = 23/100 (23%), Gaps = 1/100 (1%)
Query: 319 QKERISARNNLEAYVFNVKQALDNAGNKLTESEKSRCREECDATLKWLDNNTLADKEEYQ 378
R++ + V + ++ S +K + EE
Sbjct: 72 LVSRLAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRDEERY 131
Query: 379 DKLQQLQKSCMPLMSKMHG-GAGGASAGDMPRGGPTVEEV 417
+ ++ + G +A T E
Sbjct: 132 TLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERA 171
>d1otha1 c.78.1.1 (A:34-184) Ornithine transcarbamoylase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 151
Score = 25.5 bits (55), Expect = 9.3
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 297 LSKEEIDRMINDAERYKDEDERQKERI 323
+ EEI M+ + K +++ E +
Sbjct: 15 FTGEEIKYMLWLSADLKFRIKQKGEYL 41
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.131 0.363
Gapped
Lambda K H
0.267 0.0461 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,455,669
Number of extensions: 67132
Number of successful extensions: 265
Number of sequences better than 10.0: 1
Number of HSP's gapped: 258
Number of HSP's successfully gapped: 29
Length of query: 418
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 330
Effective length of database: 1,199,356
Effective search space: 395787480
Effective search space used: 395787480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 54 (25.2 bits)