BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7646
(301 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242020207|ref|XP_002430547.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515711|gb|EEB17809.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 443
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/191 (52%), Positives = 132/191 (69%), Gaps = 27/191 (14%)
Query: 17 IAPSAKKLWGVEEGKEDSHKTGGGGILNLND-QMWRDSTWSTSDHGVTQGMAMVPSARRP 75
IAPSAKKLWGVEE ++D G+L+L+D QMWRDSTWS +DH V+Q ++MVP RR
Sbjct: 145 IAPSAKKLWGVEEQRDDK------GLLHLSDHQMWRDSTWSIADHAVSQPISMVP--RRS 196
Query: 76 GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNS-DGSD 134
G +FPG+D A +LSPRSSD+ GLGVKMVEYVL TSPT+KD+ LE RMR LVLNS DG
Sbjct: 197 G-SFPGSDT-ANMLSPRSSDTGGLGVKMVEYVLATSPTNKDH-LESRMRNLVLNSTDGDK 253
Query: 135 VKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRT 194
+KE ++ + Y+ KK+ V+ + + Q NG NG+ +++K ++RT
Sbjct: 254 KEKELNENSTNSYETKKDDVNGNNSGQANGH---ASNGLPDDEK-----------TFNRT 299
Query: 195 PGSRQPSPTDD 205
PGSRQPSP ++
Sbjct: 300 PGSRQPSPAEE 310
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 57/71 (80%), Gaps = 5/71 (7%)
Query: 230 SDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN 289
+DH V+Q ++MVP RR G +FPG+D A +LSPRSSD+ GLGVKMVEYVL TSPT+KD+
Sbjct: 181 ADHAVSQPISMVP--RRSG-SFPGSDT-ANMLSPRSSDTGGLGVKMVEYVLATSPTNKDH 236
Query: 290 GLEPRMRGLVL 300
LE RMR LVL
Sbjct: 237 -LESRMRNLVL 246
>gi|340719709|ref|XP_003398290.1| PREDICTED: pumilio homolog 1-like [Bombus terrestris]
Length = 1239
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 125/194 (64%), Gaps = 27/194 (13%)
Query: 17 IAPSAKKLWGVEEG-KEDSHKTGGGGILNLND-QMWRDSTWSTSDHGVTQGMAMVPSARR 74
IAPSAKKLWGV+EG +D GGGIL+L D QMWRDSTWSTSDH V+Q ++M + RR
Sbjct: 191 IAPSAKKLWGVDEGGSKDEGGVKGGGILHLGDHQMWRDSTWSTSDHAVSQPISM-GTGRR 249
Query: 75 PGA---TFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSD 131
G T VLSPRSS++ GLGVKMVEYVLG+SPT+ + LEPRM L LN+D
Sbjct: 250 VGVGTGYHHQTSEVGTVLSPRSSETGGLGVKMVEYVLGSSPTTPKD-LEPRMVSLRLNTD 308
Query: 132 GSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCY 191
KKEK+K ASP+D K D +G Q NG+ QNG+D++ +
Sbjct: 309 AD--KKEKEKGSASPFDSSK---DDTGP-QNNGLTS--QNGLDDDKG------------F 348
Query: 192 SRTPGSRQPSPTDD 205
+RTPGSRQPSP ++
Sbjct: 349 NRTPGSRQPSPGEE 362
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGA---TFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPT 285
+SDH V+Q ++M + RR G T VLSPRSS++ GLGVKMVEYVLG+SPT
Sbjct: 233 TSDHAVSQPISM-GTGRRVGVGTGYHHQTSEVGTVLSPRSSETGGLGVKMVEYVLGSSPT 291
Query: 286 SKDNGLEPRMRGLVL 300
+ + LEPRM L L
Sbjct: 292 TPKD-LEPRMVSLRL 305
>gi|380029756|ref|XP_003698531.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2-like [Apis
florea]
Length = 1240
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 125/194 (64%), Gaps = 27/194 (13%)
Query: 17 IAPSAKKLWGVEEG-KEDSHKTGGGGILNLND-QMWRDSTWSTSDHGVTQGMAMVPSARR 74
IAPSAKKLWGV+EG +D GGGIL+L D QMWRDSTWSTSDH V+Q ++M + RR
Sbjct: 190 IAPSAKKLWGVDEGGSKDEGGVKGGGILHLGDHQMWRDSTWSTSDHAVSQPISM-GTGRR 248
Query: 75 PGA---TFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSD 131
G T VLSPRSS++ GLGVKMVEYVLG+SPT+ + LEPRM L LN+D
Sbjct: 249 VGVGTGYHHQTSEVGTVLSPRSSETGGLGVKMVEYVLGSSPTTPKD-LEPRMVSLRLNTD 307
Query: 132 GSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCY 191
KKEK+K ASP+D K D +G Q NG+ QNG+D++ +
Sbjct: 308 AD--KKEKEKGSASPFDSSK---DDTGP-QNNGLAS--QNGLDDDKG------------F 347
Query: 192 SRTPGSRQPSPTDD 205
+RTPGSRQPSP ++
Sbjct: 348 NRTPGSRQPSPGEE 361
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGA---TFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPT 285
+SDH V+Q ++M + RR G T VLSPRSS++ GLGVKMVEYVLG+SPT
Sbjct: 232 TSDHAVSQPISM-GTGRRVGVGTGYHHQTSEVGTVLSPRSSETGGLGVKMVEYVLGSSPT 290
Query: 286 SKDNGLEPRMRGLVL 300
+ + LEPRM L L
Sbjct: 291 TPKD-LEPRMVSLRL 304
>gi|328786740|ref|XP_391849.4| PREDICTED: pumilio homolog 2 [Apis mellifera]
Length = 1240
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 125/194 (64%), Gaps = 27/194 (13%)
Query: 17 IAPSAKKLWGVEEG-KEDSHKTGGGGILNLND-QMWRDSTWSTSDHGVTQGMAMVPSARR 74
IAPSAKKLWGV+EG +D GGGIL+L D QMWRDSTWSTSDH V+Q ++M + RR
Sbjct: 190 IAPSAKKLWGVDEGGSKDEGGVKGGGILHLGDHQMWRDSTWSTSDHAVSQPISM-GTGRR 248
Query: 75 PGA---TFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSD 131
G T VLSPRSS++ GLGVKMVEYVLG+SPT+ + LEPRM L LN+D
Sbjct: 249 VGVGTGYHHQTSEVGTVLSPRSSETGGLGVKMVEYVLGSSPTTPKD-LEPRMVSLRLNTD 307
Query: 132 GSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCY 191
KKEK+K ASP+D K D +G Q NG+ QNG+D++ +
Sbjct: 308 AD--KKEKEKGSASPFDSSK---DDTGP-QNNGLAS--QNGLDDDKG------------F 347
Query: 192 SRTPGSRQPSPTDD 205
+RTPGSRQPSP ++
Sbjct: 348 NRTPGSRQPSPGEE 361
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGA---TFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPT 285
+SDH V+Q ++M + RR G T VLSPRSS++ GLGVKMVEYVLG+SPT
Sbjct: 232 TSDHAVSQPISM-GTGRRVGVGTGYHHQTSEVGTVLSPRSSETGGLGVKMVEYVLGSSPT 290
Query: 286 SKDNGLEPRMRGLVL 300
+ + LEPRM L L
Sbjct: 291 TPKD-LEPRMVSLRL 304
>gi|350400877|ref|XP_003485990.1| PREDICTED: pumilio homolog 1-like [Bombus impatiens]
Length = 1240
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/194 (51%), Positives = 124/194 (63%), Gaps = 27/194 (13%)
Query: 17 IAPSAKKLWGVEEG-KEDSHKTGGGGILNLND-QMWRDSTWSTSDHGVTQGMAMVPSARR 74
IAPS KKLWGV+EG +D GGGIL+L D QMWRDSTWSTSDH V+Q ++M + RR
Sbjct: 191 IAPSTKKLWGVDEGGSKDEGGVKGGGILHLGDHQMWRDSTWSTSDHAVSQPISM-GTGRR 249
Query: 75 PGA---TFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSD 131
G T VLSPRSS++ GLGVKMVEYVLG+SPT+ + LEPRM L LN+D
Sbjct: 250 VGVGTGYHHQTSEVGTVLSPRSSETGGLGVKMVEYVLGSSPTTPKD-LEPRMVSLRLNTD 308
Query: 132 GSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCY 191
KKEK+K ASP+D K D +G Q NG+ QNG+D++ +
Sbjct: 309 AD--KKEKEKGSASPFDNSK---DDTGP-QNNGLTS--QNGLDDDKG------------F 348
Query: 192 SRTPGSRQPSPTDD 205
+RTPGSRQPSP ++
Sbjct: 349 NRTPGSRQPSPGEE 362
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGA---TFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPT 285
+SDH V+Q ++M + RR G T VLSPRSS++ GLGVKMVEYVLG+SPT
Sbjct: 233 TSDHAVSQPISM-GTGRRVGVGTGYHHQTSEVGTVLSPRSSETGGLGVKMVEYVLGSSPT 291
Query: 286 SKDNGLEPRMRGLVL 300
+ + LEPRM L L
Sbjct: 292 TPKD-LEPRMVSLRL 305
>gi|328698836|ref|XP_001950648.2| PREDICTED: pumilio homolog 2-like isoform 1 [Acyrthosiphon pisum]
Length = 983
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 114/175 (65%), Gaps = 32/175 (18%)
Query: 15 QTIAPSAKKLWGVEEGKEDSHKTGGGGILNLND---QMWRDSTWSTSDHGVTQGMAMVPS 71
+ IA S KKLWGVEEGKED G GILNLND QMWRDSTWS S
Sbjct: 18 EMIASSTKKLWGVEEGKED----GPKGILNLNDHHHQMWRDSTWS--------------S 59
Query: 72 ARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNS- 130
R GA FP ++ +LSPRSS+ +G+G+KMVEYVL ++P +K LEPRMR LV++S
Sbjct: 60 NTRRGAGFPVGNDSGNILSPRSSE-AGIGMKMVEYVLASTP-NKMEPLEPRMRNLVISSN 117
Query: 131 DGSDVKKEKDKAPASPYDV----KKELV--DASGAIQTNGMVPVVQNGIDNEDKY 179
DG +KKEK+K P SPYD KKE+ + S +Q NGMV VVQNG+D EDKY
Sbjct: 118 DGETIKKEKEKPPGSPYDSVNSNKKEMENGNCSTVVQQNGMV-VVQNGLD-EDKY 170
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 243 SARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL 300
S R GA FP ++ +LSPRSS++ G+G+KMVEYVL ++P +K LEPRMR LV+
Sbjct: 59 SNTRRGAGFPVGNDSGNILSPRSSEA-GIGMKMVEYVLASTP-NKMEPLEPRMRNLVI 114
>gi|328698838|ref|XP_003240745.1| PREDICTED: pumilio homolog 2-like isoform 2 [Acyrthosiphon pisum]
Length = 1151
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 113/173 (65%), Gaps = 32/173 (18%)
Query: 17 IAPSAKKLWGVEEGKEDSHKTGGGGILNLND---QMWRDSTWSTSDHGVTQGMAMVPSAR 73
IA S KKLWGVEEGKED G GILNLND QMWRDSTWS S
Sbjct: 188 IASSTKKLWGVEEGKED----GPKGILNLNDHHHQMWRDSTWS--------------SNT 229
Query: 74 RPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNS-DG 132
R GA FP ++ +LSPRSS+ +G+G+KMVEYVL ++P +K LEPRMR LV++S DG
Sbjct: 230 RRGAGFPVGNDSGNILSPRSSE-AGIGMKMVEYVLASTP-NKMEPLEPRMRNLVISSNDG 287
Query: 133 SDVKKEKDKAPASPYDV----KKELV--DASGAIQTNGMVPVVQNGIDNEDKY 179
+KKEK+K P SPYD KKE+ + S +Q NGMV VVQNG+D EDKY
Sbjct: 288 ETIKKEKEKPPGSPYDSVNSNKKEMENGNCSTVVQQNGMV-VVQNGLD-EDKY 338
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 243 SARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL 300
S R GA FP ++ +LSPRSS++ G+G+KMVEYVL ++P +K LEPRMR LV+
Sbjct: 227 SNTRRGAGFPVGNDSGNILSPRSSEA-GIGMKMVEYVLASTP-NKMEPLEPRMRNLVI 282
>gi|328698840|ref|XP_003240746.1| PREDICTED: pumilio homolog 2-like isoform 3 [Acyrthosiphon pisum]
Length = 1116
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 113/173 (65%), Gaps = 32/173 (18%)
Query: 17 IAPSAKKLWGVEEGKEDSHKTGGGGILNLND---QMWRDSTWSTSDHGVTQGMAMVPSAR 73
IA S KKLWGVEEGKED G GILNLND QMWRDSTWS S
Sbjct: 153 IASSTKKLWGVEEGKED----GPKGILNLNDHHHQMWRDSTWS--------------SNT 194
Query: 74 RPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNS-DG 132
R GA FP ++ +LSPRSS+ +G+G+KMVEYVL ++P +K LEPRMR LV++S DG
Sbjct: 195 RRGAGFPVGNDSGNILSPRSSE-AGIGMKMVEYVLASTP-NKMEPLEPRMRNLVISSNDG 252
Query: 133 SDVKKEKDKAPASPYDV----KKELV--DASGAIQTNGMVPVVQNGIDNEDKY 179
+KKEK+K P SPYD KKE+ + S +Q NGMV VVQNG+D EDKY
Sbjct: 253 ETIKKEKEKPPGSPYDSVNSNKKEMENGNCSTVVQQNGMV-VVQNGLD-EDKY 303
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Query: 243 SARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL 300
S R GA FP ++ +LSPRSS++ G+G+KMVEYVL ++P +K LEPRMR LV+
Sbjct: 192 SNTRRGAGFPVGNDSGNILSPRSSEA-GIGMKMVEYVLASTP-NKMEPLEPRMRNLVI 247
>gi|383848137|ref|XP_003699708.1| PREDICTED: pumilio homolog 2-like [Megachile rotundata]
Length = 1241
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 124/194 (63%), Gaps = 27/194 (13%)
Query: 17 IAPSAKKLWGVEEG-KEDSHKTGGGGILNLND-QMWRDSTWSTSDHGVTQGMAMVPSARR 74
+APSAKKLWGV+EG +D GGGIL+L D QMWRDSTWSTSDH V+Q ++M + RR
Sbjct: 190 LAPSAKKLWGVDEGGSKDEGGVKGGGILHLGDHQMWRDSTWSTSDHAVSQPISM-GTGRR 248
Query: 75 PGA---TFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSD 131
G T VLSPRSS++ GLGVKMVEYVLG+SPT+ + LE RM L LN+D
Sbjct: 249 VGVGTGYHHQTSEVGTVLSPRSSETGGLGVKMVEYVLGSSPTTPKD-LESRMASLRLNTD 307
Query: 132 GSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCY 191
KKEK+K ASP+D K D +G Q NG+ QNG+D++ +
Sbjct: 308 AD--KKEKEKGSASPFDGSK---DDTGP-QNNGLAS--QNGLDDDKG------------F 347
Query: 192 SRTPGSRQPSPTDD 205
+RTPGSRQPSP ++
Sbjct: 348 NRTPGSRQPSPGEE 361
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGA---TFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPT 285
+SDH V+Q ++M + RR G T VLSPRSS++ GLGVKMVEYVLG+SPT
Sbjct: 232 TSDHAVSQPISM-GTGRRVGVGTGYHHQTSEVGTVLSPRSSETGGLGVKMVEYVLGSSPT 290
Query: 286 SKDNGLEPRMRGLVL 300
+ + LE RM L L
Sbjct: 291 TPKD-LESRMASLRL 304
>gi|332017053|gb|EGI57852.1| Pumilio-like protein 2 [Acromyrmex echinatior]
Length = 330
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 126/199 (63%), Gaps = 33/199 (16%)
Query: 17 IAPSAKKLWGVEEG--KEDSHKTGGGGILNLNDQ---MWRDSTWST-SDHGVTQGMAMVP 70
IAPS KKLWGV+EG K++ GGG +L+L D MWRDSTWST SDH V+Q ++M
Sbjct: 4 IAPSTKKLWGVDEGGSKDEGGVKGGGTLLHLGDHPTTMWRDSTWSTTSDHAVSQPISM-G 62
Query: 71 SARRPGATFPGTDNGAG----VLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGL 126
+ RR G G + A VLSPRSS++ GLGVKMVEYVLG+SPT+ + LEPRM L
Sbjct: 63 TGRRVGVG-TGYHHQASEVGTVLSPRSSETGGLGVKMVEYVLGSSPTTPKD-LEPRMVSL 120
Query: 127 VLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPG 186
LN+D KKEK+K ASP+D K D +G Q NG+ QNG+D++
Sbjct: 121 RLNTDAD--KKEKEKGSASPFDNTK---DDAGP-QGNGLAS--QNGLDDDK--------- 163
Query: 187 GVVCYSRTPGSRQPSPTDD 205
++RTPGSRQPSP ++
Sbjct: 164 ---GFNRTPGSRQPSPGEE 179
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%), Gaps = 7/79 (8%)
Query: 226 FSDSSDHGVTQGMAMVPSARRPGATFPGTDNGAG----VLSPRSSDSSGLGVKMVEYVLG 281
+S +SDH V+Q ++M + RR G G + A VLSPRSS++ GLGVKMVEYVLG
Sbjct: 47 WSTTSDHAVSQPISM-GTGRRVGVG-TGYHHQASEVGTVLSPRSSETGGLGVKMVEYVLG 104
Query: 282 TSPTSKDNGLEPRMRGLVL 300
+SPT+ + LEPRM L L
Sbjct: 105 SSPTTPKD-LEPRMVSLRL 122
>gi|307210858|gb|EFN87211.1| Pumilio-like protein 1 [Harpegnathos saltator]
Length = 428
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 115/174 (66%), Gaps = 25/174 (14%)
Query: 17 IAPSAKKLWGVEEG-KEDSHKTGGGGILNLND-QMWRDSTWSTSDHGVTQGMAMVPSARR 74
IAPSAKKLWGV++G +D GGGIL+L D QMWRDSTWSTSDH V+Q ++M + RR
Sbjct: 249 IAPSAKKLWGVDDGGSKDEGGVKGGGILHLGDHQMWRDSTWSTSDHAVSQPISM-GTGRR 307
Query: 75 PG--------ATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGL 126
G A+ GT VLSPRSS++ GLGVKMVEYVLG+SPT+ LEPRM L
Sbjct: 308 VGVGTGYHHQASEVGT-----VLSPRSSETGGLGVKMVEYVLGSSPTTPKE-LEPRMVSL 361
Query: 127 VLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYK 180
LN+D KKEK+K ASP+D K D +G Q NG+ QNG+D++ +K
Sbjct: 362 RLNTDAD--KKEKEKGSASPFDNSK---DDNGP-QGNGLAS--QNGLDDDKGFK 407
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 15/80 (18%)
Query: 229 SSDHGVTQGMAMVPSARRPG--------ATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVL 280
+SDH V+Q ++M + RR G A+ GT VLSPRSS++ GLGVKMVEYVL
Sbjct: 291 TSDHAVSQPISM-GTGRRVGVGTGYHHQASEVGT-----VLSPRSSETGGLGVKMVEYVL 344
Query: 281 GTSPTSKDNGLEPRMRGLVL 300
G+SPT+ LEPRM L L
Sbjct: 345 GSSPTTPKE-LEPRMVSLRL 363
>gi|321475177|gb|EFX86140.1| hypothetical protein DAPPUDRAFT_97958 [Daphnia pulex]
Length = 214
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/114 (64%), Positives = 87/114 (76%), Gaps = 10/114 (8%)
Query: 17 IAPSAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTS--DHGVTQGMAMVPSARR 74
IAPSAKKLWGVEE KED+ + + N++DQ WRDSTWS S DH V+Q ++M RR
Sbjct: 109 IAPSAKKLWGVEEQKEDTKSS----LFNISDQTWRDSTWSNSTIDHAVSQPISMGHGPRR 164
Query: 75 PGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL 128
G +FPG++ A VLSPRSS++ GLGVKMVEYVLGTSPT+KD LE RMRGLVL
Sbjct: 165 SG-SFPGSEV-ANVLSPRSSETGGLGVKMVEYVLGTSPTNKD--LESRMRGLVL 214
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 55/70 (78%), Gaps = 4/70 (5%)
Query: 231 DHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNG 290
DH V+Q ++M RR G +FPG++ A VLSPRSS++ GLGVKMVEYVLGTSPT+KD
Sbjct: 149 DHAVSQPISMGHGPRRSG-SFPGSEV-ANVLSPRSSETGGLGVKMVEYVLGTSPTNKD-- 204
Query: 291 LEPRMRGLVL 300
LE RMRGLVL
Sbjct: 205 LESRMRGLVL 214
>gi|270016510|gb|EFA12956.1| pumilio [Tribolium castaneum]
Length = 1102
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 116/190 (61%), Gaps = 41/190 (21%)
Query: 17 IAPSAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPG 76
IAP+AKKLWG+E +D+ K+ LN ++Q+WRDSTW+ +H V+ +AM RR G
Sbjct: 111 IAPAAKKLWGLE--AKDA-KSLALNHLN-HEQVWRDSTWAAPEHAVSASLAM---GRRGG 163
Query: 77 ATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN-GLEPRMRGLVLNSDGSDV 135
F G D G+ +LSPR SD+ GLGVKMVEYVLG SPT+KDN GLEPRMR L L D
Sbjct: 164 --FVGGDTGS-ILSPRGSDNGGLGVKMVEYVLGGSPTNKDNIGLEPRMRALHLVDD---- 216
Query: 136 KKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTP 195
K+KDK P SP KE V+ VQNG +ED+ ++RTP
Sbjct: 217 -KDKDK-PQSP----KEEVNGQA----------VQNGQVSEDEKG----------FNRTP 250
Query: 196 GSRQPSPTDD 205
GSRQPSP ++
Sbjct: 251 GSRQPSPAEE 260
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 60/90 (66%), Gaps = 9/90 (10%)
Query: 214 AAVHHSHQKPARFSD--SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGL 271
A H +H++ R S + +H V+ +AM RR G F G D G+ +LSPR SD+ GL
Sbjct: 130 ALNHLNHEQVWRDSTWAAPEHAVSASLAM---GRRGG--FVGGDTGS-ILSPRGSDNGGL 183
Query: 272 GVKMVEYVLGTSPTSKDN-GLEPRMRGLVL 300
GVKMVEYVLG SPT+KDN GLEPRMR L L
Sbjct: 184 GVKMVEYVLGGSPTNKDNIGLEPRMRALHL 213
>gi|307182543|gb|EFN69739.1| Pumilio-like protein 2 [Camponotus floridanus]
Length = 257
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 103/161 (63%), Gaps = 27/161 (16%)
Query: 49 MWRDSTWSTSDHGVTQGMAMVPSARRPGATFPGTDNGAG----VLSPRSSDSSGLGVKMV 104
MWRDSTWSTSDH V+Q ++M + RR G G + A VLSPRSS++ GLGVKMV
Sbjct: 1 MWRDSTWSTSDHAVSQPISMG-TGRRVGVGT-GYHHQASEVGTVLSPRSSETGGLGVKMV 58
Query: 105 EYVLGTSPTSKDNGLEPRMRGLVLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNG 164
EYVLG+SPT+ + LEPRM L LN+D KKEK+K ASP+D K D +G Q NG
Sbjct: 59 EYVLGSSPTTPKD-LEPRMVSLRLNTDVD--KKEKEKGSASPFDSTK---DDTGP-QGNG 111
Query: 165 MVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGSRQPSPTDD 205
+ QNG+D EDK ++RTPGSRQPSP ++
Sbjct: 112 L--ASQNGLD-EDK-----------GFNRTPGSRQPSPGEE 138
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 7/76 (9%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAG----VLSPRSSDSSGLGVKMVEYVLGTSP 284
+SDH V+Q ++M + RR G G + A VLSPRSS++ GLGVKMVEYVLG+SP
Sbjct: 9 TSDHAVSQPISMG-TGRRVGVGT-GYHHQASEVGTVLSPRSSETGGLGVKMVEYVLGSSP 66
Query: 285 TSKDNGLEPRMRGLVL 300
T+ + LEPRM L L
Sbjct: 67 TTPKD-LEPRMVSLRL 81
>gi|157132419|ref|XP_001656035.1| hypothetical protein AaeL_AAEL012416 [Aedes aegypti]
gi|108871193|gb|EAT35418.1| AAEL012416-PA [Aedes aegypti]
Length = 405
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 127/234 (54%), Gaps = 51/234 (21%)
Query: 5 KFVVGNDDTKQTIAPSAKKLWGVEEGKEDSHKTGGGGI------LNLN----DQMWRDST 54
+++ N+ T A KKLW E+G + K GG L+L+ Q+WRDST
Sbjct: 96 QYIARNNAAITTSA--TKKLW--EKGGSNDVKVATGGAAGSLAPLHLHATTDHQVWRDST 151
Query: 55 WSTSDHGVTQGMAMVPSAR-RPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPT 113
WS+ QG A++ S R P A G+LSPR S + GLGVKMVEYVLG SPT
Sbjct: 152 WSS------QGDAILASRRIFPHAPDTNPTGSTGILSPRDS-TGGLGVKMVEYVLGGSPT 204
Query: 114 SKDN---GLEPRMRGLVLNSDGSDVKKEKDKAPASPYD---VKKELVDASGAIQTNGMVP 167
+K++ LEPR +GL + D +KDKA SP++ +KKE V++ TNG+V
Sbjct: 205 NKESPLASLEPRFKGLKFD-DNDKTSDDKDKA-NSPFESNGLKKEEVNS-----TNGVVI 257
Query: 168 VVQNGIDNEDKYKYSSGPGGVVCYSRTPGSRQPSPTDDGSELAA--VQAAVHHS 219
V NGID +DK ++RTPGSRQPSP ++ A+ + A HH+
Sbjct: 258 V--NGID-DDK-----------GFNRTPGSRQPSPAEEQLPRASNLLDAPSHHN 297
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 223 PARFSDSSDHGV-------TQGMAMVPSAR-RPGATFPGTDNGAGVLSPRSSDSSGLGVK 274
P ++DH V +QG A++ S R P A G+LSPR S + GLGVK
Sbjct: 135 PLHLHATTDHQVWRDSTWSSQGDAILASRRIFPHAPDTNPTGSTGILSPRDS-TGGLGVK 193
Query: 275 MVEYVLGTSPTSKDN---GLEPRMRGLVLE 301
MVEYVLG SPT+K++ LEPR +GL +
Sbjct: 194 MVEYVLGGSPTNKESPLASLEPRFKGLKFD 223
>gi|350538385|ref|NP_001233239.1| Pumilio2 [Xenopus laevis]
gi|313661062|dbj|BAJ41096.1| Pumilio2 [Xenopus laevis]
Length = 1173
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 113/213 (53%), Gaps = 37/213 (17%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKK W ED K G G+ L D+ WR++TW S H ++Q + + RRPG F
Sbjct: 133 AKKFWE----HEDPAKDGQKGMF-LADE-WRENTWGASHHSMSQPIMV---QRRPGQGFH 183
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDV---KK 137
G + A VLSPRS +S GLGV MVEYVL +SP K L+PR R V + ++ +K
Sbjct: 184 GNHDVASVLSPRS-ESGGLGVSMVEYVLSSSPADK---LDPRFRKGVFSVRDCELDGPEK 239
Query: 138 EKDKAPASPY--DVKKELV--DASGAIQTNGM-VPVVQNGIDNEDKYKYSSGPGGVVCYS 192
+ K ASP+ + K++L+ D + NG +P NGI+++ K ++
Sbjct: 240 GEQKCKASPFEEEKKRDLISADTDNVSKLNGRGLP---NGIESDCKD-----------FN 285
Query: 193 RTPGSRQPSPTDDGSELA--AVQAAVHHSHQKP 223
RTPGSRQ SPT+ + ++ A V HQ P
Sbjct: 286 RTPGSRQASPTEITERIGPNSISAEVLGQHQNP 318
>gi|357608363|gb|EHJ65954.1| hypothetical protein KGM_08061 [Danaus plexippus]
Length = 601
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 108/216 (50%), Gaps = 59/216 (27%)
Query: 13 TKQTIAPSAKKLWGVEEGKEDSHKTGGGGI--------LNLN-DQMWRDSTWSTS--DHG 61
+ IAPSAKKLW D GG I L LN +QMWRD TWS +H
Sbjct: 226 IRNQIAPSAKKLW-------DKGPGAGGDIKGPPHLPPLQLNPEQMWRDPTWSAQAVEHN 278
Query: 62 VTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS------- 114
V G+ M+ + R G FPG D + +LSPR D++GLGVKMVEYVL SPT
Sbjct: 279 V--GVPMMGTRR--GVAFPGGD-ASSILSPR--DTAGLGVKMVEYVLRGSPTEGGVAGAV 331
Query: 115 -----KDNGLEPRMRGLVLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVV 169
K G+ +RG+VL D + E A ASP+D + A+Q NG+
Sbjct: 332 AGGGDKVAGVVAGLRGMVL-----DERSEDKPAAASPFDKDLHELHDHAALQ-NGL---- 381
Query: 170 QNGIDNEDKYKYSSGPGGVVCYSRTPGSRQPSPTDD 205
NG D +DK ++RTPGSRQPSP ++
Sbjct: 382 HNGQD-DDK-----------AFNRTPGSRQPSPAEE 405
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 39/68 (57%), Gaps = 15/68 (22%)
Query: 246 RPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS------------KDNGLEP 293
R G FPG D + +LSPR D++GLGVKMVEYVL SPT K G+
Sbjct: 287 RRGVAFPGGD-ASSILSPR--DTAGLGVKMVEYVLRGSPTEGGVAGAVAGGGDKVAGVVA 343
Query: 294 RMRGLVLE 301
+RG+VL+
Sbjct: 344 GLRGMVLD 351
>gi|301609979|ref|XP_002934529.1| PREDICTED: pumilio homolog 2-like [Xenopus (Silurana) tropicalis]
Length = 1175
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 105/192 (54%), Gaps = 35/192 (18%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKK W ED K G G+ L D+ WR++TW S H ++Q + + RRPG +F
Sbjct: 132 AKKFWE----HEDPAKDGQKGMF-LADE-WRENTWGASHHSMSQPIMV---QRRPGQSFH 182
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDV---KK 137
G + A VLSPRS +S GLGV MVEYVL +SP K L+PR R V + ++ +K
Sbjct: 183 GNHDVASVLSPRS-ESGGLGVSMVEYVLSSSPADK---LDPRFRKGVFSVRDCELDGPEK 238
Query: 138 EKDKAPASPY--DVKKELV--DASGAIQTNGM-VPVVQNGIDNEDKYKYSSGPGGVVCYS 192
+ K ASP+ + K++L+ D + NG +P NGID + K ++
Sbjct: 239 GEQKGKASPFEEEKKRDLISADPDDVSKLNGRGLP---NGIDTDCK-----------DFN 284
Query: 193 RTPGSRQPSPTD 204
RTPGSRQ SPT+
Sbjct: 285 RTPGSRQASPTE 296
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RRPG +F G + A VLSPRS +S GLGV MVEYVL +SP K
Sbjct: 162 ASHHSMSQPIMV---QRRPGQSFHGNHDVASVLSPRS-ESGGLGVSMVEYVLSSSPADK- 216
Query: 289 NGLEPRMR 296
L+PR R
Sbjct: 217 --LDPRFR 222
>gi|427782705|gb|JAA56804.1| Putative pumilio log 1 [Rhipicephalus pulchellus]
Length = 1138
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 107/198 (54%), Gaps = 36/198 (18%)
Query: 17 IAPSAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWST------SDHGVTQGMAMVP 70
I S KKLW +EE + G L L DQ WRD TWST S+H V+Q + +
Sbjct: 84 IPASTKKLWSLEETGPKPEDSKG---LFLGDQ-WRDPTWSTGGHASTSEHAVSQPIMV-- 137
Query: 71 SARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNS 130
RR G ++PG++ GA +LSPRSS++SGLGVKMVEYVLG+SPT KD L+ RM G +
Sbjct: 138 -QRRSG-SYPGSE-GASMLSPRSSETSGLGVKMVEYVLGSSPTIKD--LDSRMVGRM--- 189
Query: 131 DGSDVKKEKDKAPASPYDVKKELVDASG---AIQTNGMVPVVQNGIDNEDKYKYSSGPGG 187
V + + +L DA G +Q NG ++ NGID++ Y
Sbjct: 190 ---HVGPPTNDPEKVKKGKEGKLKDADGRTAVMQANG---IMHNGIDDDKVYN------- 236
Query: 188 VVCYSRTPGSRQPSPTDD 205
V Y GSRQ SP++D
Sbjct: 237 PVGYRGGGGSRQASPSED 254
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 54/71 (76%), Gaps = 7/71 (9%)
Query: 227 SDSSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS 286
+ +S+H V+Q + + RR G ++PG++ GA +LSPRSS++SGLGVKMVEYVLG+SPT
Sbjct: 124 ASTSEHAVSQPIMV---QRRSG-SYPGSE-GASMLSPRSSETSGLGVKMVEYVLGSSPTI 178
Query: 287 KDNGLEPRMRG 297
KD L+ RM G
Sbjct: 179 KD--LDSRMVG 187
>gi|322789785|gb|EFZ14949.1| hypothetical protein SINV_07276 [Solenopsis invicta]
Length = 225
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 76/118 (64%), Gaps = 21/118 (17%)
Query: 88 VLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDVKKEKDKAPASPY 147
VLSPRSS++ GLGVKMVEYVLG+SPT+ + LEPRM L LN D KKEKDK ASP+
Sbjct: 23 VLSPRSSETGGLGVKMVEYVLGSSPTTPKD-LEPRMVSLRLNPDAD--KKEKDKGSASPF 79
Query: 148 DVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGSRQPSPTDD 205
D K+ DA Q NG+ QNG+D++ ++RTPGSRQPSP ++
Sbjct: 80 DSSKD--DA--GPQGNGL--ASQNGLDDDK------------GFNRTPGSRQPSPGEE 119
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 34/41 (82%), Gaps = 1/41 (2%)
Query: 260 VLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL 300
VLSPRSS++ GLGVKMVEYVLG+SPT+ + LEPRM L L
Sbjct: 23 VLSPRSSETGGLGVKMVEYVLGSSPTTPKD-LEPRMVSLRL 62
>gi|312374950|gb|EFR22408.1| hypothetical protein AND_15276 [Anopheles darlingi]
Length = 906
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 112/206 (54%), Gaps = 46/206 (22%)
Query: 17 IAPSAKKLWGVEEGKEDSHKTGGGGI-----LNLN----DQMWRDSTWSTSDHGVTQGMA 67
I +AKKLW E+G + K GG L L+ Q+W STWS+ QG A
Sbjct: 417 INTTAKKLW--EKGGSNDVKATGGATGPLPPLQLHGTTDHQVWPSSTWSS------QGDA 468
Query: 68 MVPSARRPGATFPGTD--NGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN---GLEPR 122
++ RR P ++ G+LSPR S + GLGVKMVEYVLG SPT+K++ LEPR
Sbjct: 469 IL-GQRRIFQHAPDSNPTGSTGILSPRDS-TGGLGVKMVEYVLGGSPTNKESPLASLEPR 526
Query: 123 MRGLVLNSDGSDVKKEKDKAPASPYD---VKKELVDASGAIQTNGMVPVVQNGIDNEDKY 179
+GL + DG +KDK SP+D +KKE V G TNG+V V NGID++
Sbjct: 527 FKGLKFD-DGDKTSDDKDKE-NSPFDTNGLKKEEVVVPG---TNGVVMV--NGIDDDKG- 578
Query: 180 KYSSGPGGVVCYSRTPGSRQPSPTDD 205
++RTPGSRQPSP ++
Sbjct: 579 -----------FNRTPGSRQPSPAEE 593
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 14/91 (15%)
Query: 223 PARFSDSSDHGV-------TQGMAMVPSARRPGATFPGTD--NGAGVLSPRSSDSSGLGV 273
P + ++DH V +QG A++ RR P ++ G+LSPR S + GLGV
Sbjct: 445 PLQLHGTTDHQVWPSSTWSSQGDAIL-GQRRIFQHAPDSNPTGSTGILSPRDS-TGGLGV 502
Query: 274 KMVEYVLGTSPTSKDN---GLEPRMRGLVLE 301
KMVEYVLG SPT+K++ LEPR +GL +
Sbjct: 503 KMVEYVLGGSPTNKESPLASLEPRFKGLKFD 533
>gi|347970897|ref|XP_003436658.1| AGAP003914-PB [Anopheles gambiae str. PEST]
gi|333469539|gb|EGK97332.1| AGAP003914-PB [Anopheles gambiae str. PEST]
Length = 1378
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 112/202 (55%), Gaps = 44/202 (21%)
Query: 20 SAKKLW---GVEEGKEDSHKTGGGGILNLN----DQMWRDSTWSTSDHGVTQGMAMVPSA 72
+AKKLW G + K + TG L L+ +WRDSTWS+ QG A++ +
Sbjct: 260 TAKKLWEKGGSNDVKVAAAATGPLPPLQLHGTTDHPVWRDSTWSS------QGDAILAAP 313
Query: 73 RR---PGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN---GLEPRMRGL 126
RR GA T + G+LSPR S + GLGVKMVEYVLG SPT+K++ L+ R +GL
Sbjct: 314 RRIFQHGAESNPTGS-TGILSPRDS-TGGLGVKMVEYVLGGSPTNKESPLASLDSRFKGL 371
Query: 127 VLNSDGSDVKKEKDKAPASPYD---VKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSS 183
+ DG +KDKA SP++ VKKE V TNG+V V NGID++
Sbjct: 372 KFD-DGDKASDDKDKA-NSPFETNGVKKEEVVPG----TNGVVMV--NGIDDDKG----- 418
Query: 184 GPGGVVCYSRTPGSRQPSPTDD 205
++RTPGSRQPSP ++
Sbjct: 419 -------FNRTPGSRQPSPAEE 433
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 15/92 (16%)
Query: 223 PARFSDSSDHGV-------TQGMAMVPSARR---PGATFPGTDNGAGVLSPRSSDSSGLG 272
P + ++DH V +QG A++ + RR GA T + G+LSPR S + GLG
Sbjct: 285 PLQLHGTTDHPVWRDSTWSSQGDAILAAPRRIFQHGAESNPTGS-TGILSPRDS-TGGLG 342
Query: 273 VKMVEYVLGTSPTSKDN---GLEPRMRGLVLE 301
VKMVEYVLG SPT+K++ L+ R +GL +
Sbjct: 343 VKMVEYVLGGSPTNKESPLASLDSRFKGLKFD 374
>gi|390179097|ref|XP_003736803.1| GA30209, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859711|gb|EIM52876.1| GA30209, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1192
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 106/217 (48%), Gaps = 44/217 (20%)
Query: 20 SAKKLWGVEEGKEDSHKTGGG----GILNLND--QMWRDSTWSTSDHGVTQGMAMVPSAR 73
+AKKLW +GK S GG I + D +W+D TWST + + P
Sbjct: 29 TAKKLWEKSDGKGTSSAPGGPLNPLQIPGVGDPSSVWKDHTWSTQGENI-----LAPPRS 83
Query: 74 RPGATFPGTDN-----GAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN---GLEPRMRG 125
R A GT + AG+LSPR S + KMVEYVLG SPT+K++ GLEPR+R
Sbjct: 84 RGYAGHGGTSDTSNSGNAGILSPRDSQCA----KMVEYVLGGSPTNKESPLSGLEPRLRN 139
Query: 126 LVLN-SDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSG 184
L + +D S KEK +P +KK+ TNG+V NGID++ +
Sbjct: 140 LKFDDNDKSHDDKEKANSPFDTNGMKKD----DQVSNTNGVV----NGIDDDKGF----- 186
Query: 185 PGGVVCYSRTPGSRQPSPTDDGSELAAVQAAVHHSHQ 221
+RTPGSRQPSP ++ L Q + HS
Sbjct: 187 -------NRTPGSRQPSPAEETLPLPRPQNLLDHSQH 216
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 7/47 (14%)
Query: 258 AGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
AG+LSPR S + KMVEYVLG SPT+K+ +GLEPR+R L +
Sbjct: 101 AGILSPRDSQCA----KMVEYVLGGSPTNKESPLSGLEPRLRNLKFD 143
>gi|390179095|ref|XP_003736802.1| GA30209, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|388859710|gb|EIM52875.1| GA30209, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 1531
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 106/217 (48%), Gaps = 44/217 (20%)
Query: 20 SAKKLWGVEEGKEDSHKTGGG----GILNLND--QMWRDSTWSTSDHGVTQGMAMVPSAR 73
+AKKLW +GK S GG I + D +W+D TWST + + P
Sbjct: 368 TAKKLWEKSDGKGTSSAPGGPLNPLQIPGVGDPSSVWKDHTWSTQGENI-----LAPPRS 422
Query: 74 RPGATFPGTDN-----GAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN---GLEPRMRG 125
R A GT + AG+LSPR S + KMVEYVLG SPT+K++ GLEPR+R
Sbjct: 423 RGYAGHGGTSDTSNSGNAGILSPRDSQCA----KMVEYVLGGSPTNKESPLSGLEPRLRN 478
Query: 126 LVLN-SDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSG 184
L + +D S KEK +P +KK+ TNG+V NGID++ +
Sbjct: 479 LKFDDNDKSHDDKEKANSPFDTNGMKKD----DQVSNTNGVV----NGIDDDKGF----- 525
Query: 185 PGGVVCYSRTPGSRQPSPTDDGSELAAVQAAVHHSHQ 221
+RTPGSRQPSP ++ L Q + HS
Sbjct: 526 -------NRTPGSRQPSPAEETLPLPRPQNLLDHSQH 555
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 7/47 (14%)
Query: 258 AGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
AG+LSPR S + KMVEYVLG SPT+K+ +GLEPR+R L +
Sbjct: 440 AGILSPRDSQCA----KMVEYVLGGSPTNKESPLSGLEPRLRNLKFD 482
>gi|195111833|ref|XP_002000481.1| GI22501 [Drosophila mojavensis]
gi|193917075|gb|EDW15942.1| GI22501 [Drosophila mojavensis]
Length = 748
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 103/201 (51%), Gaps = 46/201 (22%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNL-------NDQMWRDSTWSTSDHGVTQGMAMVPSA 72
+AKKLW +GK S T GG + L + +W+D TWST QG ++
Sbjct: 395 TAKKLWEKSDGK--SGATAGGPLNPLQIPGVGDHSSVWKDHTWST------QGENILAPP 446
Query: 73 RRPGATFPG-TDN----GAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMR 124
R G G +DN AG+LSPR S VKMVEYVLG SPT+K+ + LEPRMR
Sbjct: 447 RPRGYPHAGASDNSNSGNAGILSPRDSTC----VKMVEYVLGGSPTNKESPLSSLEPRMR 502
Query: 125 GLVLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSG 184
L + D +K+KA +SP+D L TNG+V NGID++
Sbjct: 503 NLKFD-DNDKSHDDKEKA-SSPFDTNG-LKKDDQVTNTNGVV----NGIDDDKG------ 549
Query: 185 PGGVVCYSRTPGSRQPSPTDD 205
++RTPGSRQPSP ++
Sbjct: 550 ------FNRTPGSRQPSPAEE 564
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 7/47 (14%)
Query: 258 AGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
AG+LSPR S VKMVEYVLG SPT+K+ + LEPRMR L +
Sbjct: 465 AGILSPRDSTC----VKMVEYVLGGSPTNKESPLSSLEPRMRNLKFD 507
>gi|195153210|ref|XP_002017522.1| GL22343 [Drosophila persimilis]
gi|194112579|gb|EDW34622.1| GL22343 [Drosophila persimilis]
Length = 680
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 107/215 (49%), Gaps = 44/215 (20%)
Query: 20 SAKKLWGVEEGKEDSHKTGGG----GILNLND--QMWRDSTWSTSDHGVTQGMAMVPSAR 73
+AKKLW +GK S GG I + D +W+D TWST + + P
Sbjct: 368 TAKKLWEKSDGKGTSSAPGGPLNPLQIPGVGDPSSVWKDHTWSTQGENI-----LAPPRS 422
Query: 74 RPGATFPGTDN-----GAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN---GLEPRMRG 125
R A GT + AG+LSPR S + KMVEYVLG SPT+K++ GLEPR+R
Sbjct: 423 RGYAGHGGTSDTSNSGNAGILSPRDSQCA----KMVEYVLGGSPTNKESPLSGLEPRLRN 478
Query: 126 LVLN-SDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSG 184
L + +D S KEK +P +KK+ TNG+V NGID +DK
Sbjct: 479 LKFDDNDKSHDDKEKANSPFDTNGMKKD----DQVSNTNGVV----NGID-DDK------ 523
Query: 185 PGGVVCYSRTPGSRQPSPTDDGSELAAVQAAVHHS 219
++RTPGSRQPSP ++ L Q + HS
Sbjct: 524 -----GFNRTPGSRQPSPAEETLPLPRPQNLLDHS 553
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 7/47 (14%)
Query: 258 AGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
AG+LSPR S + KMVEYVLG SPT+K+ +GLEPR+R L +
Sbjct: 440 AGILSPRDSQCA----KMVEYVLGGSPTNKESPLSGLEPRLRNLKFD 482
>gi|195396063|ref|XP_002056652.1| GJ10104 [Drosophila virilis]
gi|194143361|gb|EDW59764.1| GJ10104 [Drosophila virilis]
Length = 715
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 101/200 (50%), Gaps = 42/200 (21%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNL-------NDQMWRDSTWSTSDHGVTQGMAMVPSA 72
+AKKLW +GK + T GG + L + +W+D TWST + + P
Sbjct: 409 TAKKLWEKSDGKSGASSTPGGPLNPLQIPGVGDHSSVWKDHTWSTQ----AENILAPPRP 464
Query: 73 R---RPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGL 126
R GA+ AG+LSPR S VKMVE+VLG SPT+K+ + LEPRMR L
Sbjct: 465 RGYPHGGASDNSNSGNAGILSPRDSTC----VKMVEFVLGGSPTNKESPLSSLEPRMRNL 520
Query: 127 VL-NSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGP 185
++D S KEK +P +KK+ TNG+V NGID +DK
Sbjct: 521 KFDDNDKSHDDKEKANSPVDTNGLKKD----DQVTNTNGVV----NGID-DDK------- 564
Query: 186 GGVVCYSRTPGSRQPSPTDD 205
++RTPGSRQPSP ++
Sbjct: 565 ----GFNRTPGSRQPSPAEE 580
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 7/47 (14%)
Query: 258 AGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
AG+LSPR S VKMVE+VLG SPT+K+ + LEPRMR L +
Sbjct: 481 AGILSPRDSTC----VKMVEFVLGGSPTNKESPLSSLEPRMRNLKFD 523
>gi|285026404|ref|NP_001165518.1| pumilio 2 [Oryzias latipes]
gi|261872059|gb|ACY02863.1| pumilio 2 [Oryzias latipes]
Length = 1199
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 110/219 (50%), Gaps = 38/219 (17%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKKLW +E +D K G IL + WR + W +S H V+Q + + RRPG F
Sbjct: 138 AKKLWDSDELTKDGRK---GMILG---EEWRGNAWGSSHHSVSQPIMV---QRRPGQGFH 188
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDVKKEKD 140
G + VLSPRS + GLGV MVEYVL +SP K +G R G + DV+++ D
Sbjct: 189 GNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDKMDG-RYRNGGFGGGNIDQDVREKSD 246
Query: 141 -KAPASPYDVKK----ELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTP 195
+ SP++ K ++ + S +TNG V+ NG+D + K ++ TP
Sbjct: 247 AQDKVSPFEEDKSAEMKVGEESDPTKTNGR--VLLNGMDRDCK-----------DFNPTP 293
Query: 196 GSRQPSPTDDGSELAAVQAAV-----HHSH----QKPAR 225
GSRQ SPT+ + QA + HH H Q PA+
Sbjct: 294 GSRQASPTEAVERMGPSQAGLEMMGQHHPHVLQQQNPAQ 332
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
SS H V+Q + + RRPG F G + VLSPRS + GLGV MVEYVL +SP K
Sbjct: 168 SSHHSVSQPIMV---QRRPGQGFHGNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDKM 223
Query: 289 NG 290
+G
Sbjct: 224 DG 225
>gi|195055386|ref|XP_001994600.1| GH15246 [Drosophila grimshawi]
gi|193892363|gb|EDV91229.1| GH15246 [Drosophila grimshawi]
Length = 712
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 101/202 (50%), Gaps = 46/202 (22%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNL-------NDQMWRDSTWSTSDHGVTQGMAMVPSA 72
+AKKLW +GK + GG + L + +W+D TWST QG ++
Sbjct: 393 TAKKLWEKSDGKSGASGNTGGPLNPLQIPGVGDHSSVWKDHTWST------QGENILAPP 446
Query: 73 RRPGATFPGTDN-----GAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMR 124
R G G + AG+LSPR S VKMVEYVLG SPT+K+ + LEPRMR
Sbjct: 447 RPRGYPHGGASDTSNSGNAGILSPRDSTC----VKMVEYVLGGSPTNKESPLSSLEPRMR 502
Query: 125 GLVL-NSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSS 183
L ++D S KEK +P +KK+ TNG+V NGID +DK
Sbjct: 503 NLKFDDNDKSHDDKEKANSPFDTNGLKKD----DQVPNTNGVV----NGID-DDK----- 548
Query: 184 GPGGVVCYSRTPGSRQPSPTDD 205
++RTPGSRQPSP ++
Sbjct: 549 ------GFNRTPGSRQPSPAEE 564
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 7/47 (14%)
Query: 258 AGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
AG+LSPR S VKMVEYVLG SPT+K+ + LEPRMR L +
Sbjct: 465 AGILSPRDSTC----VKMVEYVLGGSPTNKESPLSSLEPRMRNLKFD 507
>gi|345317320|ref|XP_001515901.2| PREDICTED: pumilio homolog 2-like, partial [Ornithorhynchus
anatinus]
Length = 431
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 95/197 (48%), Gaps = 36/197 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RRPG F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRPGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDV---KKE 138
+LSPRS +S GLGV MVEYVL +SP K L+ R R + ++ +K
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGAFGTRDAETDGPEKG 129
Query: 139 KDKAPASPY------DVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYS 192
K ASP+ D+K+ D I G+ NG+D + K ++
Sbjct: 130 DQKGKASPFEEDKNRDLKQGDDDDVSKINGRGL----PNGMDADCK-----------DFN 174
Query: 193 RTPGSRQPSPTDDGSEL 209
RTPGSRQ SPT+ L
Sbjct: 175 RTPGSRQASPTEVAERL 191
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RRPG F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRPGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|344252117|gb|EGW08221.1| Pumilio-like 2 [Cricetulus griseus]
Length = 1064
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 93/189 (49%), Gaps = 32/189 (16%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G +F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LADDEWRETAWGTSHHSMSQPIMV---QRRSGQSFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELVDASGAIQTNGM-VPVVQNGIDNEDKYKYSSGPGGVVCYSRTP 195
EK KA D ++L + NG +P NG+D + K ++RTP
Sbjct: 130 DEKGKASPFEEDQNRDLKQDDEDSKINGRGLP---NGMDADCK-----------DFNRTP 175
Query: 196 GSRQPSPTD 204
GSRQ SPT+
Sbjct: 176 GSRQASPTE 184
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G +F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQSFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|45551850|ref|NP_731316.2| pumilio, isoform B [Drosophila melanogaster]
gi|45446432|gb|AAF54338.2| pumilio, isoform B [Drosophila melanogaster]
Length = 1185
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 102/209 (48%), Gaps = 45/209 (21%)
Query: 13 TKQTIAPS-AKKLWGVEEGKEDSHKTGGGGILNLN-------DQMWRDSTWSTSDHGVTQ 64
T++ I S AKKLW +GK S T GG + L +W+D TWST +
Sbjct: 21 TQEMITTSTAKKLWEKSDGKGVSSSTPGGPLHPLQIPGIGDPSSVWKDHTWSTQGENI-- 78
Query: 65 GMAMVPSARRP----GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN--- 117
+VP R GA+ AG+LSPR S + K+VEYV SPT+KD+
Sbjct: 79 ---LVPPPSRAYAHGGASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLS 131
Query: 118 GLEPRMRGLVLN-SDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNE 176
GLEP +R L + +D S KEK +P +KK+ +NG+V NGID++
Sbjct: 132 GLEPHLRNLKFDDNDKSRDDKEKANSPFDTNGLKKD----DQVTNSNGVV----NGIDDD 183
Query: 177 DKYKYSSGPGGVVCYSRTPGSRQPSPTDD 205
+ +RTPGSRQPSP ++
Sbjct: 184 KGF------------NRTPGSRQPSPAEE 200
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 248 GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGL 298
GA+ AG+LSPR S + K+VEYV SPT+KD +GLEP +R L
Sbjct: 91 GASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRNL 140
>gi|354479904|ref|XP_003502149.1| PREDICTED: pumilio homolog 2 isoform 2 [Cricetulus griseus]
Length = 986
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 93/189 (49%), Gaps = 32/189 (16%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G +F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LADDEWRETAWGTSHHSMSQPIMV---QRRSGQSFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELVDASGAIQTNGM-VPVVQNGIDNEDKYKYSSGPGGVVCYSRTP 195
EK KA D ++L + NG +P NG+D + K ++RTP
Sbjct: 130 DEKGKASPFEEDQNRDLKQDDEDSKINGRGLP---NGMDADCK-----------DFNRTP 175
Query: 196 GSRQPSPTD 204
GSRQ SPT+
Sbjct: 176 GSRQASPTE 184
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G +F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQSFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|60677917|gb|AAX33465.1| RE10602p [Drosophila melanogaster]
Length = 1298
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 98/200 (49%), Gaps = 42/200 (21%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLN-------DQMWRDSTWSTSDHGVTQGMAMVPSA 72
+AKKLW +GK S T GG + L +W+D TWST + +VP
Sbjct: 377 TAKKLWEKSDGKGVSSSTPGGPLHPLQIPGIGDPSSVWKDHTWSTQGENI-----LVPPP 431
Query: 73 RRP----GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN---GLEPRMRG 125
R GA+ AG+LSPR S + K+VEYV SPT+KD+ GLEP +R
Sbjct: 432 SRAYAHGGASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRN 487
Query: 126 LVLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGP 185
L + D + +K+KA SP+D L +NG+V NGID++ +
Sbjct: 488 LKFD-DNDKSRDDKEKA-NSPFDTNG-LKKDDQVTNSNGVV----NGIDDDKGF------ 534
Query: 186 GGVVCYSRTPGSRQPSPTDD 205
+RTPGSRQPSP ++
Sbjct: 535 ------NRTPGSRQPSPAEE 548
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 7/47 (14%)
Query: 258 AGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
AG+LSPR S + K+VEYV SPT+KD +GLEP +R L +
Sbjct: 449 AGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRNLKFD 491
>gi|8394|emb|CAA44474.1| pumilio [Drosophila melanogaster]
Length = 1533
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 98/200 (49%), Gaps = 42/200 (21%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLN-------DQMWRDSTWSTSDHGVTQGMAMVPSA 72
+AKKLW +GK S T GG + L +W+D TWST + +VP
Sbjct: 377 TAKKLWEKSDGKGVSSSTPGGPLHPLQIPGIGDPSSVWKDHTWSTQGENI-----LVPPP 431
Query: 73 RRP----GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN---GLEPRMRG 125
R GA+ AG+LSPR S + K+VEYV SPT+KD+ GLEP +R
Sbjct: 432 SRAYAHGGASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRN 487
Query: 126 LVLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGP 185
L + D + +K+KA SP+D L +NG+V NGID++ +
Sbjct: 488 LKFD-DNDKSRDDKEKA-NSPFDTNG-LKKDDQVTNSNGVV----NGIDDDKGF------ 534
Query: 186 GGVVCYSRTPGSRQPSPTDD 205
+RTPGSRQPSP ++
Sbjct: 535 ------NRTPGSRQPSPAEE 548
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 248 GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
GA+ AG+LSPR S + K+VEYV SPT+KD +GLEP +R L +
Sbjct: 439 GASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRNLKFD 491
>gi|354479902|ref|XP_003502148.1| PREDICTED: pumilio homolog 2 isoform 1 [Cricetulus griseus]
Length = 1065
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 93/189 (49%), Gaps = 32/189 (16%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G +F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LADDEWRETAWGTSHHSMSQPIMV---QRRSGQSFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELVDASGAIQTNGM-VPVVQNGIDNEDKYKYSSGPGGVVCYSRTP 195
EK KA D ++L + NG +P NG+D + K ++RTP
Sbjct: 130 DEKGKASPFEEDQNRDLKQDDEDSKINGRGLP---NGMDADCK-----------DFNRTP 175
Query: 196 GSRQPSPTD 204
GSRQ SPT+
Sbjct: 176 GSRQASPTE 184
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G +F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQSFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|194744542|ref|XP_001954752.1| GF18426 [Drosophila ananassae]
gi|190627789|gb|EDV43313.1| GF18426 [Drosophila ananassae]
Length = 755
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 101/200 (50%), Gaps = 41/200 (20%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLN-------DQMWRDSTWSTSDHGVTQGMAMVPS- 71
+AKKLW +GK + T GG + L +W+D TWST + +A PS
Sbjct: 468 TAKKLWEKSDGKGVTSSTPGGPLNPLQIPGIGDPSSVWKDHTWSTQGENI---LAPPPSR 524
Query: 72 --ARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGL 126
A GA+ G+LSPR S + KMVEYVL SPT+K+ +GLEPR+R L
Sbjct: 525 VYAAHGGASDTSNSGNTGILSPRDSTCA----KMVEYVLSGSPTNKESPLSGLEPRLRNL 580
Query: 127 VL-NSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGP 185
++D S KEK +P +KK+ TNG+V NGID +DK
Sbjct: 581 KFDDNDKSHDDKEKANSPFDTNGLKKD----DQVSNTNGVV----NGID-DDK------- 624
Query: 186 GGVVCYSRTPGSRQPSPTDD 205
++RTPGSRQPSP ++
Sbjct: 625 ----GFNRTPGSRQPSPAEE 640
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 7/46 (15%)
Query: 259 GVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
G+LSPR S + KMVEYVL SPT+K+ +GLEPR+R L +
Sbjct: 542 GILSPRDSTCA----KMVEYVLSGSPTNKESPLSGLEPRLRNLKFD 583
>gi|33589344|gb|AAQ22439.1| RE63138p [Drosophila melanogaster]
Length = 1533
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 98/200 (49%), Gaps = 42/200 (21%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLN-------DQMWRDSTWSTSDHGVTQGMAMVPSA 72
+AKKLW +GK S T GG + L +W+D TWST + +VP
Sbjct: 377 TAKKLWEKSDGKGVSSSTPGGPLHPLQIPGIGDPSSVWKDHTWSTQGENI-----LVPPP 431
Query: 73 RRP----GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN---GLEPRMRG 125
R GA+ AG+LSPR S + K+VEYV SPT+KD+ GLEP +R
Sbjct: 432 SRAYAHGGASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRN 487
Query: 126 LVLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGP 185
L + D + +K+KA SP+D L +NG+V NGID++ +
Sbjct: 488 LKFD-DNDKSRDDKEKA-NSPFDTNG-LKKDDQVTNSNGVV----NGIDDDKGF------ 534
Query: 186 GGVVCYSRTPGSRQPSPTDD 205
+RTPGSRQPSP ++
Sbjct: 535 ------NRTPGSRQPSPAEE 548
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 248 GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
GA+ AG+LSPR S + K+VEYV SPT+KD +GLEP +R L +
Sbjct: 439 GASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRNLKFD 491
>gi|24645262|ref|NP_731314.1| pumilio, isoform A [Drosophila melanogaster]
gi|24645264|ref|NP_524285.2| pumilio, isoform C [Drosophila melanogaster]
gi|24645266|ref|NP_731315.1| pumilio, isoform D [Drosophila melanogaster]
gi|442618162|ref|NP_001262403.1| pumilio, isoform G [Drosophila melanogaster]
gi|34978383|sp|P25822.2|PUM_DROME RecName: Full=Maternal protein pumilio
gi|23170765|gb|AAF54340.2| pumilio, isoform A [Drosophila melanogaster]
gi|23170766|gb|AAN13409.1| pumilio, isoform C [Drosophila melanogaster]
gi|23170767|gb|AAN13410.1| pumilio, isoform D [Drosophila melanogaster]
gi|440217234|gb|AGB95785.1| pumilio, isoform G [Drosophila melanogaster]
Length = 1533
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 98/200 (49%), Gaps = 42/200 (21%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLN-------DQMWRDSTWSTSDHGVTQGMAMVPSA 72
+AKKLW +GK S T GG + L +W+D TWST + +VP
Sbjct: 377 TAKKLWEKSDGKGVSSSTPGGPLHPLQIPGIGDPSSVWKDHTWSTQGENI-----LVPPP 431
Query: 73 RRP----GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN---GLEPRMRG 125
R GA+ AG+LSPR S + K+VEYV SPT+KD+ GLEP +R
Sbjct: 432 SRAYAHGGASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRN 487
Query: 126 LVLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGP 185
L + D + +K+KA SP+D L +NG+V NGID++ +
Sbjct: 488 LKFD-DNDKSRDDKEKA-NSPFDTNG-LKKDDQVTNSNGVV----NGIDDDKGF------ 534
Query: 186 GGVVCYSRTPGSRQPSPTDD 205
+RTPGSRQPSP ++
Sbjct: 535 ------NRTPGSRQPSPAEE 548
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 248 GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
GA+ AG+LSPR S + K+VEYV SPT+KD +GLEP +R L +
Sbjct: 439 GASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRNLKFD 491
>gi|158191|gb|AAB59189.1| pumilio protein [Drosophila melanogaster]
gi|384208|prf||1905306A pumilio gene
Length = 1533
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 98/200 (49%), Gaps = 42/200 (21%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLN-------DQMWRDSTWSTSDHGVTQGMAMVPSA 72
+AKKLW +GK S T GG + L +W+D TWST + +VP
Sbjct: 377 TAKKLWEKSDGKGVSSSTPGGPLHPLQIPGIGDPSSVWKDHTWSTQGENI-----LVPPP 431
Query: 73 RRP----GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN---GLEPRMRG 125
R GA+ AG+LSPR S + K+VEYV SPT+KD+ GLEP +R
Sbjct: 432 SRAYAHGGASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRN 487
Query: 126 LVLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGP 185
L + D + +K+KA SP+D L +NG+V NGID++ +
Sbjct: 488 LKFD-DNDKSRDDKEKA-NSPFDTNG-LKKDDQVTNSNGVV----NGIDDDKGF------ 534
Query: 186 GGVVCYSRTPGSRQPSPTDD 205
+RTPGSRQPSP ++
Sbjct: 535 ------NRTPGSRQPSPAEE 548
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 248 GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
GA+ AG+LSPR S + K+VEYV SPT+KD +GLEP +R L +
Sbjct: 439 GASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRNLKFD 491
>gi|338721822|ref|XP_001916930.2| PREDICTED: pumilio homolog 1 [Equus caballus]
Length = 1163
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 106/210 (50%), Gaps = 49/210 (23%)
Query: 15 QTIAPSAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARR 74
Q + P KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RR
Sbjct: 121 QQLLP-GKKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRR 170
Query: 75 PGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSD 131
PG +F VLSPRS +S GLGV MVEYVL +SP + G PR +SD
Sbjct: 171 PGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSD 225
Query: 132 GSDVKKEKDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPG 186
+D ++K+K D+K+E +VD +TNG+ VQNGID + K
Sbjct: 226 ENDKGEKKNKGAFDGDKLGDLKEEGDVVD-----KTNGL--PVQNGIDADVK-------- 270
Query: 187 GVVCYSRTPGSRQPS--------PTDDGSE 208
+SRTPG+ Q S P +GSE
Sbjct: 271 ---DFSRTPGNCQNSANEVDLLGPNQNGSE 297
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 156 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 211
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 212 LRKGGFGPR 220
>gi|195330496|ref|XP_002031939.1| GM26281 [Drosophila sechellia]
gi|194120882|gb|EDW42925.1| GM26281 [Drosophila sechellia]
Length = 321
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 101/208 (48%), Gaps = 43/208 (20%)
Query: 13 TKQTIAPS-AKKLWGVEEGKEDSHKTGGGGILNLN-------DQMWRDSTWSTSDHGVTQ 64
T++ I S AKKLW +GK S T GG + L +W+D TWST +
Sbjct: 21 TQEMITTSTAKKLWEKSDGKGVSSSTPGGPLHPLQIPGIGDPSSVWKDHTWSTQSENI-- 78
Query: 65 GMAMVPSARRP----GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN--- 117
+VP R GA+ AG+LSPR S + K+VEYV SPT+KD+
Sbjct: 79 ---LVPPPSRAYAHGGASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLS 131
Query: 118 GLEPRMRGLVLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNED 177
GLEP +R L + D + +K+KA SP+D L NG+V NGID++
Sbjct: 132 GLEPHLRNLKFD-DNDKSRDDKEKA-NSPFDTNG-LKKDDQVTNANGVV----NGIDDDK 184
Query: 178 KYKYSSGPGGVVCYSRTPGSRQPSPTDD 205
++RTPGSRQPSP ++
Sbjct: 185 ------------GFNRTPGSRQPSPAEE 200
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 248 GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
GA+ AG+LSPR S + K+VEYV SPT+KD +GLEP +R L +
Sbjct: 91 GASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRNLKFD 143
>gi|237649083|ref|NP_001153692.1| pumilio homolog 2 isoform 2 [Mus musculus]
gi|237649085|ref|NP_001153693.1| pumilio homolog 2 isoform 2 [Mus musculus]
gi|74200874|dbj|BAE24797.1| unnamed protein product [Mus musculus]
Length = 1064
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 95/192 (49%), Gaps = 38/192 (19%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G +F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQSFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDV---KKE 138
+LSPRS +S GLGV MVEYVL +SP K L+ R R + ++ +K
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 139 KDKAPASPY------DVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYS 192
K ASP+ D+K++ D I G+ NG+D + K ++
Sbjct: 130 DQKGKASPFEEDQNRDLKQD--DEDSKINGRGL----PNGMDADCK-----------DFN 172
Query: 193 RTPGSRQPSPTD 204
RTPGSRQ SPT+
Sbjct: 173 RTPGSRQASPTE 184
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G +F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQSFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|395526792|ref|XP_003765540.1| PREDICTED: pumilio homolog 1 isoform 1 [Sarcophilus harrisii]
Length = 1188
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W + DS K G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 151 KKFWETD----DSSKDGPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 201
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 202 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 256
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 257 KNKGTFDGDKLGDLKEEGDVID-----KTNGL--PVQNGIDADVK-----------DFSR 298
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 299 TPGNCQNSANEVDLLGPNQNGSE 321
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 180 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 235
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 236 LRKGGFGPR 244
>gi|237649070|ref|NP_109648.2| pumilio homolog 2 isoform 1 [Mus musculus]
gi|237649081|ref|NP_001153691.1| pumilio homolog 2 isoform 1 [Mus musculus]
gi|41688655|sp|Q80U58.2|PUM2_MOUSE RecName: Full=Pumilio homolog 2
gi|13919630|gb|AAK21966.1| PUM1 [Mus musculus]
gi|148665992|gb|EDK98408.1| pumilio 2 (Drosophila) [Mus musculus]
Length = 1066
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 95/192 (49%), Gaps = 38/192 (19%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G +F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQSFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDV---KKE 138
+LSPRS +S GLGV MVEYVL +SP K L+ R R + ++ +K
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 139 KDKAPASPY------DVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYS 192
K ASP+ D+K++ D I G+ NG+D + K ++
Sbjct: 130 DQKGKASPFEEDQNRDLKQD--DEDSKINGRGL----PNGMDADCK-----------DFN 172
Query: 193 RTPGSRQPSPTD 204
RTPGSRQ SPT+
Sbjct: 173 RTPGSRQASPTE 184
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G +F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQSFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|11139702|gb|AAG31805.1|AF315590_1 Pumilio 2 [Mus musculus]
Length = 1066
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 95/192 (49%), Gaps = 38/192 (19%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G +F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQSFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDV---KKE 138
+LSPRS +S GLGV MVEYVL +SP K L+ R R + ++ +K
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 139 KDKAPASPY------DVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYS 192
K ASP+ D+K++ D I G+ NG+D + K ++
Sbjct: 130 DQKGKASPFEEDQNRDLKQD--DEDSKINGRGL----PNGMDADCK-----------DFN 172
Query: 193 RTPGSRQPSPTD 204
RTPGSRQ SPT+
Sbjct: 173 RTPGSRQASPTE 184
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G +F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQSFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|237649087|ref|NP_001153694.1| pumilio homolog 2 isoform 3 [Mus musculus]
gi|27692665|gb|AAH41773.1| Pum2 protein [Mus musculus]
Length = 985
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 95/192 (49%), Gaps = 38/192 (19%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G +F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQSFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDV---KKE 138
+LSPRS +S GLGV MVEYVL +SP K L+ R R + ++ +K
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 139 KDKAPASPY------DVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYS 192
K ASP+ D+K++ D I G+ NG+D + K ++
Sbjct: 130 DQKGKASPFEEDQNRDLKQD--DEDSKINGRGL----PNGMDADCK-----------DFN 172
Query: 193 RTPGSRQPSPTD 204
RTPGSRQ SPT+
Sbjct: 173 RTPGSRQASPTE 184
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G +F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQSFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|157818169|ref|NP_001100185.1| pumilio homolog 2 [Rattus norvegicus]
gi|149050904|gb|EDM03077.1| pumilio 2 (Drosophila) [Rattus norvegicus]
Length = 1061
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 95/192 (49%), Gaps = 38/192 (19%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G +F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQSFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDV---KKE 138
+LSPRS +S GLGV MVEYVL +SP K L+ R R + ++ +K
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 139 KDKAPASPY------DVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYS 192
K ASP+ D+K++ D I G+ NG+D + K ++
Sbjct: 130 DQKGKASPFEEDQNRDLKQD--DEDSKINGRGL----PNGMDADCK-----------DFN 172
Query: 193 RTPGSRQPSPTD 204
RTPGSRQ SPT+
Sbjct: 173 RTPGSRQASPTE 184
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G +F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQSFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|126330276|ref|XP_001367437.1| PREDICTED: pumilio homolog 1 isoform 1 [Monodelphis domestica]
Length = 1188
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W + DS K G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 151 KKFWETD----DSSKDGPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 201
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 202 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 256
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 257 KNKGTFDGDKLGDLKEEGDVID-----KTNGL--PVQNGIDADVK-----------DFSR 298
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 299 TPGNCQNSANEVDLLGPNQNGSE 321
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 180 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 235
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 236 LRKGGFGPR 244
>gi|28972107|dbj|BAC65507.1| mKIAA0235 protein [Mus musculus]
Length = 969
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 95/192 (49%), Gaps = 38/192 (19%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G +F G
Sbjct: 6 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQSFHG 57
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDV---KKE 138
+LSPRS +S GLGV MVEYVL +SP K L+ R R + ++ +K
Sbjct: 58 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 113
Query: 139 KDKAPASPY------DVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYS 192
K ASP+ D+K++ D I G+ NG+D + K ++
Sbjct: 114 DQKGKASPFEEDQNRDLKQD--DEDSKINGRGL----PNGMDADCK-----------DFN 156
Query: 193 RTPGSRQPSPTD 204
RTPGSRQ SPT+
Sbjct: 157 RTPGSRQASPTE 168
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G +F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 36 TSHHSMSQPIMV---QRRSGQSFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 90
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 91 --LDSRFR 96
>gi|74208592|dbj|BAE37556.1| unnamed protein product [Mus musculus]
Length = 980
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 95/192 (49%), Gaps = 38/192 (19%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G +F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQSFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDV---KKE 138
+LSPRS +S GLGV MVEYVL +SP K L+ R R + ++ +K
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 139 KDKAPASPY------DVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYS 192
K ASP+ D+K++ D I G+ NG+D + K ++
Sbjct: 130 DQKGKASPFEEDQNRDLKQD--DEDSKINGRGL----PNGMDADCK-----------DFN 172
Query: 193 RTPGSRQPSPTD 204
RTPGSRQ SPT+
Sbjct: 173 RTPGSRQASPTE 184
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G +F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQSFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|157822487|ref|NP_001102154.1| pumilio homolog 1 [Rattus norvegicus]
gi|149024100|gb|EDL80597.1| pumilio 1 (Drosophila) (predicted) [Rattus norvegicus]
Length = 1189
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGAFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQSSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|348571012|ref|XP_003471290.1| PREDICTED: pumilio homolog 1-like isoform 1 [Cavia porcellus]
Length = 1186
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDTDVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|195499335|ref|XP_002096905.1| GE24796 [Drosophila yakuba]
gi|194183006|gb|EDW96617.1| GE24796 [Drosophila yakuba]
Length = 671
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 99/200 (49%), Gaps = 42/200 (21%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLN-------DQMWRDSTWSTSDHGVTQGMAMVPSA 72
+AKKLW +GK S T GG + L +W+D TWST + +VP
Sbjct: 386 TAKKLWEKSDGKGVSSSTPGGPLHPLQIPGIGDPSSVWKDHTWSTQGENI-----LVPPP 440
Query: 73 RRP----GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN---GLEPRMRG 125
R GA+ AG+LSPR S + K+VEYV SPT+KD+ GLEP +R
Sbjct: 441 SRAYAHGGASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRN 496
Query: 126 LVLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGP 185
L + D + +K+KA SP+D L +NG+V NGID +DK
Sbjct: 497 LKFD-DNDKSRDDKEKA-NSPFDTNG-LKKDDQVTNSNGVV----NGID-DDK------- 541
Query: 186 GGVVCYSRTPGSRQPSPTDD 205
++RTPGSRQPSP ++
Sbjct: 542 ----GFNRTPGSRQPSPAEE 557
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 248 GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
GA+ AG+LSPR S + K+VEYV SPT+KD +GLEP +R L +
Sbjct: 448 GASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRNLKFD 500
>gi|194903401|ref|XP_001980863.1| GG17393 [Drosophila erecta]
gi|190652566|gb|EDV49821.1| GG17393 [Drosophila erecta]
Length = 673
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 99/200 (49%), Gaps = 42/200 (21%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLN-------DQMWRDSTWSTSDHGVTQGMAMVPSA 72
+AKKLW +GK S T GG + L +W+D TWST + +VP
Sbjct: 388 TAKKLWEKSDGKGVSSSTPGGPLHPLQIPGIGDPSSVWKDHTWSTQGENI-----LVPPP 442
Query: 73 RRP----GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN---GLEPRMRG 125
R GA+ AG+LSPR S + K+VEYV SPT+KD+ GLEP +R
Sbjct: 443 SRAYAHGGASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRN 498
Query: 126 LVLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGP 185
L + D + +K+KA SP+D L +NG+V NGID +DK
Sbjct: 499 LKFD-DNDKSRDDKEKA-NSPFDTNG-LKKDDQVTNSNGVV----NGID-DDK------- 543
Query: 186 GGVVCYSRTPGSRQPSPTDD 205
++RTPGSRQPSP ++
Sbjct: 544 ----GFNRTPGSRQPSPAEE 559
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 248 GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
GA+ AG+LSPR S + K+VEYV SPT+KD +GLEP +R L +
Sbjct: 450 GASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRNLKFD 502
>gi|168278511|dbj|BAG11135.1| pumilio homolog 1 [synthetic construct]
Length = 1162
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|109000894|ref|XP_001096958.1| PREDICTED: pumilio homolog 1 isoform 6 [Macaca mulatta]
Length = 1162
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|426328693|ref|XP_004025384.1| PREDICTED: pumilio homolog 1 [Gorilla gorilla gorilla]
Length = 976
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D K GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 186 KKFWETDESSKDGPK----GIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 236
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 237 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPR----DADSDENDKGEK 291
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + V +SR
Sbjct: 292 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDAD-----------VKDFSR 333
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 334 TPGNCQNSANEVDLLGPNQNGSE 356
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 215 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 270
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 271 LRKGGFGPR 279
>gi|410966646|ref|XP_003989841.1| PREDICTED: pumilio homolog 1 isoform 1 [Felis catus]
Length = 1186
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|126305609|ref|XP_001369426.1| PREDICTED: pumilio homolog 2 isoform 1 [Monodelphis domestica]
Length = 1082
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 92/196 (46%), Gaps = 35/196 (17%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W ++ +D K+ + L D WR++ W T H ++Q + + RRPG F G
Sbjct: 22 KKFWEPDDSTKDGQKS-----VFLGDDEWRETAWGTPHHSMSQPIMV---QRRPGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
VLSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAVLSPRS-ESGGLGVSMVEYVLSSSPAEK---LDSRFRKGAFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
EK KA D ++L + I G+ NG+D + K ++R
Sbjct: 130 DEKGKASPFEEDTNRDLKQGDEEDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTDDGSEL 209
TPGSRQ SPT+ L
Sbjct: 175 TPGSRQASPTEVAERL 190
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
RRPG F G VLSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 65 RRPGQGFHGNSEVNAVLSPRS-ESGGLGVSMVEYVLSSSPAEK---LDSRFR 112
>gi|334313569|ref|XP_003339931.1| PREDICTED: pumilio homolog 2 isoform 2 [Monodelphis domestica]
Length = 1002
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 92/196 (46%), Gaps = 35/196 (17%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W ++ +D K+ + L D WR++ W T H ++Q + + RRPG F G
Sbjct: 22 KKFWEPDDSTKDGQKS-----VFLGDDEWRETAWGTPHHSMSQPIMV---QRRPGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
VLSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAVLSPRS-ESGGLGVSMVEYVLSSSPAEK---LDSRFRKGAFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
EK KA D ++L + I G+ NG+D + K ++R
Sbjct: 130 DEKGKASPFEEDTNRDLKQGDEEDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTDDGSEL 209
TPGSRQ SPT+ L
Sbjct: 175 TPGSRQASPTEVAERL 190
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
RRPG F G VLSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 65 RRPGQGFHGNSEVNAVLSPRS-ESGGLGVSMVEYVLSSSPAEK---LDSRFR 112
>gi|431891161|gb|ELK02038.1| Pumilio like protein 1 [Pteropus alecto]
Length = 1349
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 177 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 227
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 228 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 282
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 283 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 324
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 325 TPGNCQNSANEVDLLGPNQNGSE 347
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 206 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 261
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 262 LRKGGFGPR 270
>gi|227430382|ref|NP_001153075.1| pumilio homolog 1 isoform 2 [Mus musculus]
gi|29748037|gb|AAH50747.1| Pum1 protein [Mus musculus]
Length = 1186
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|195572361|ref|XP_002104164.1| GD20817 [Drosophila simulans]
gi|194200091|gb|EDX13667.1| GD20817 [Drosophila simulans]
Length = 327
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 102/208 (49%), Gaps = 43/208 (20%)
Query: 13 TKQTIAPS-AKKLWGVEEGKEDSHKTGGGGILNLN-------DQMWRDSTWSTSDHGVTQ 64
T++ I S AKKLW +GK S T GG + L +W+D TWST +
Sbjct: 21 TQEMITTSTAKKLWEKSDGKGVSPSTPGGPLHPLQIPGIGDPSSVWKDHTWSTQGENI-- 78
Query: 65 GMAMVPSARRP----GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN--- 117
+VP R GA+ AG+LSPR S + K+VEYV SPT+KD+
Sbjct: 79 ---LVPPPSRAYAHGGASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLS 131
Query: 118 GLEPRMRGLVLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNED 177
GLEP +R L + D + +K+KA SP+D L +NG+V NGID++
Sbjct: 132 GLEPHLRNLKFD-DNDKSRDDKEKA-NSPFDTNG-LKKDDQVTNSNGVV----NGIDDDK 184
Query: 178 KYKYSSGPGGVVCYSRTPGSRQPSPTDD 205
++RTPGSRQPSP ++
Sbjct: 185 ------------GFNRTPGSRQPSPAEE 200
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 248 GATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
GA+ AG+LSPR S + K+VEYV SPT+KD +GLEP +R L +
Sbjct: 91 GASDTSNSGNAGILSPRDSTCA----KVVEYVFSGSPTNKDSSLSGLEPHLRNLKFD 143
>gi|58257646|dbj|BAA07895.3| KIAA0099 protein [Homo sapiens]
Length = 1175
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 163 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 213
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 214 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 268
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 269 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 310
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 311 TPGNCQNSANEVDLLGPNQNGSE 333
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 192 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 247
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 248 LRKGGFGPR 256
>gi|74184013|dbj|BAE37045.1| unnamed protein product [Mus musculus]
Length = 1108
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|410966648|ref|XP_003989842.1| PREDICTED: pumilio homolog 1 isoform 2 [Felis catus]
Length = 1224
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 186 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 236
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 237 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 291
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 292 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 333
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 334 TPGNCQNSANEVDLLGPNQNGSE 356
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 215 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 270
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 271 LRKGGFGPR 279
>gi|351699059|gb|EHB01978.1| Pumilio-like protein 1 [Heterocephalus glaber]
Length = 1091
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 106/210 (50%), Gaps = 49/210 (23%)
Query: 15 QTIAPSAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARR 74
Q + P KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RR
Sbjct: 42 QQLLP-GKKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRR 91
Query: 75 PGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSD 131
PG +F VLSPRS +S GLGV MVEYVL +SP + G PR +SD
Sbjct: 92 PGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSD 146
Query: 132 GSDVKKEKDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPG 186
+D ++K+K D+K+E ++D +TNG+ VQNGID + K
Sbjct: 147 ENDKGEKKNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-------- 191
Query: 187 GVVCYSRTPGSRQPS--------PTDDGSE 208
+SRTPG+ Q S P +GSE
Sbjct: 192 ---DFSRTPGNCQNSANEVDLLGPNQNGSE 218
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 77 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 132
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 133 LRKGGFGPR 141
>gi|66932909|ref|NP_001018494.1| pumilio homolog 1 isoform 1 [Homo sapiens]
gi|380784595|gb|AFE64173.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|383410799|gb|AFH28613.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|384943764|gb|AFI35487.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|410225218|gb|JAA09828.1| pumilio homolog 1 [Pan troglodytes]
gi|410266290|gb|JAA21111.1| pumilio homolog 1 [Pan troglodytes]
gi|410304038|gb|JAA30619.1| pumilio homolog 1 [Pan troglodytes]
gi|410350697|gb|JAA41952.1| pumilio homolog 1 [Pan troglodytes]
Length = 1188
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|119628035|gb|EAX07630.1| pumilio homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 1193
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|119628036|gb|EAX07631.1| pumilio homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 1189
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|440896924|gb|ELR48715.1| Pumilio-like protein 1, partial [Bos grunniens mutus]
Length = 1192
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 154 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 204
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 205 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 259
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 260 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 301
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 302 TPGNCQNSANEVDLLGPNQNGSE 324
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 183 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 238
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 239 LRKGGFGPR 247
>gi|344287508|ref|XP_003415495.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Loxodonta
africana]
Length = 1185
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|332254530|ref|XP_003276382.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1 [Nomascus
leucogenys]
Length = 1222
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 186 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 236
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 237 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 291
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 292 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 333
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 334 TPGNCQNSANEVDLLGPNQNGSE 356
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 215 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 270
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 271 LRKGGFGPR 279
>gi|300797595|ref|NP_001180052.1| pumilio homolog 1 [Bos taurus]
gi|296490233|tpg|DAA32346.1| TPA: pumilio homolog 1 [Bos taurus]
Length = 1186
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|74206258|dbj|BAE24888.1| unnamed protein product [Mus musculus]
Length = 1189
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|227430380|ref|NP_109647.2| pumilio homolog 1 isoform 1 [Mus musculus]
gi|41688656|sp|Q80U78.2|PUM1_MOUSE RecName: Full=Pumilio homolog 1
gi|148698187|gb|EDL30134.1| pumilio 1 (Drosophila), isoform CRA_a [Mus musculus]
Length = 1189
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|227430384|ref|NP_001153076.1| pumilio homolog 1 isoform 3 [Mus musculus]
gi|29165749|gb|AAH48174.1| Pumilio 1 (Drosophila) [Mus musculus]
gi|74208613|dbj|BAE37564.1| unnamed protein product [Mus musculus]
Length = 1188
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|28972067|dbj|BAC65487.1| mKIAA0099 protein [Mus musculus]
Length = 1218
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 179 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 229
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 230 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPR----DADSDENDKGEK 284
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 285 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 326
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 327 TPGNCQNSANEVDLLGPNQNGSE 349
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 208 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 263
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 264 LRKGGFGPR 272
>gi|13491166|ref|NP_055491.1| pumilio homolog 1 isoform 2 [Homo sapiens]
gi|332808248|ref|XP_001157169.2| PREDICTED: pumilio homolog 1 isoform 3 [Pan troglodytes]
gi|397515861|ref|XP_003828160.1| PREDICTED: pumilio homolog 1 isoform 1 [Pan paniscus]
gi|402853679|ref|XP_003891518.1| PREDICTED: pumilio homolog 1 isoform 1 [Papio anubis]
gi|41688619|sp|Q14671.3|PUM1_HUMAN RecName: Full=Pumilio homolog 1; Short=HsPUM; Short=Pumilio-1
gi|11139706|gb|AAG31807.1|AF315592_1 Pumilio 1 [Homo sapiens]
gi|15426559|gb|AAH13398.1| Pumilio homolog 1 (Drosophila) [Homo sapiens]
gi|119628038|gb|EAX07633.1| pumilio homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|119628039|gb|EAX07634.1| pumilio homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|158256990|dbj|BAF84468.1| unnamed protein product [Homo sapiens]
gi|325463587|gb|ADZ15564.1| pumilio homolog 1 (Drosophila) [synthetic construct]
gi|380784597|gb|AFE64174.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|383410801|gb|AFH28614.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|384943766|gb|AFI35488.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|410225216|gb|JAA09827.1| pumilio homolog 1 [Pan troglodytes]
gi|410266288|gb|JAA21110.1| pumilio homolog 1 [Pan troglodytes]
gi|410304036|gb|JAA30618.1| pumilio homolog 1 [Pan troglodytes]
gi|410350699|gb|JAA41953.1| pumilio homolog 1 [Pan troglodytes]
Length = 1186
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|197102622|ref|NP_001127595.1| pumilio homolog 1 [Pongo abelii]
gi|75041171|sp|Q5R5X3.1|PUM1_PONAB RecName: Full=Pumilio homolog 1
gi|55732279|emb|CAH92843.1| hypothetical protein [Pongo abelii]
Length = 1186
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|119628037|gb|EAX07632.1| pumilio homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1224
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 186 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 236
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 237 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 291
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 292 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 333
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 334 TPGNCQNSANEVDLLGPNQNGSE 356
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 215 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 270
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 271 LRKGGFGPR 279
>gi|426221803|ref|XP_004005096.1| PREDICTED: pumilio homolog 1 isoform 1 [Ovis aries]
Length = 1180
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|410916791|ref|XP_003971870.1| PREDICTED: pumilio homolog 2-like [Takifugu rubripes]
Length = 1201
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 106/210 (50%), Gaps = 36/210 (17%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKKLW +E +D K G +L + WR++ W +S H V+Q + + RRPG +F
Sbjct: 136 AKKLWDSDELAKDGRK---GMLLG---EEWRENAWGSSHHSVSQPIMV---QRRPGQSFH 186
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR-GLVLNSDGSDVKKEK 139
G + VLSPRS + GLGV MVEYVL +SP K +G R R G DG+ +EK
Sbjct: 187 GNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDKMDG---RYRNGGYGTGDGAPDGREK 242
Query: 140 DKA--PASPY--DVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTP 195
A SP+ D +E+ + + + NG + NG+D + K ++ TP
Sbjct: 243 SDAQEKVSPFEEDKNQEVGEENDPAKANGR--GLLNGMDRDCK-----------DFNPTP 289
Query: 196 GSRQPSPTDDGSELAAVQAAV-----HHSH 220
GSRQ SPT+ + Q+ + HH H
Sbjct: 290 GSRQASPTEAVERMGPSQSGLEMMVQHHPH 319
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
SS H V+Q + + RRPG +F G + VLSPRS + GLGV MVEYVL +SP K
Sbjct: 166 SSHHSVSQPIMV---QRRPGQSFHGNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDKM 221
Query: 289 NG 290
+G
Sbjct: 222 DG 223
>gi|148698189|gb|EDL30136.1| pumilio 1 (Drosophila), isoform CRA_c [Mus musculus]
Length = 1215
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 179 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 229
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 230 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPR----DADSDENDKGEK 284
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 285 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 326
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 327 TPGNCQNSANEVDLLGPNQNGSE 349
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 208 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 263
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 264 LRKGGFGPR 272
>gi|148698188|gb|EDL30135.1| pumilio 1 (Drosophila), isoform CRA_b [Mus musculus]
Length = 1212
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 174 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 224
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 225 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPR----DADSDENDKGEK 279
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 280 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 321
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 322 TPGNCQNSANEVDLLGPNQNGSE 344
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 203 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 258
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 259 LRKGGFGPR 267
>gi|109000868|ref|XP_001096289.1| PREDICTED: pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|114555200|ref|XP_001157067.1| PREDICTED: pumilio homolog 1 isoform 2 [Pan troglodytes]
gi|397515865|ref|XP_003828162.1| PREDICTED: pumilio homolog 1 isoform 3 [Pan paniscus]
gi|355557757|gb|EHH14537.1| hypothetical protein EGK_00481 [Macaca mulatta]
Length = 1224
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 186 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 236
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 237 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 291
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 292 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 333
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 334 TPGNCQNSANEVDLLGPNQNGSE 356
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 215 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 270
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 271 LRKGGFGPR 279
>gi|395856838|ref|XP_003800825.1| PREDICTED: pumilio homolog 1 [Otolemur garnettii]
Length = 1165
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 149 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 199
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 200 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 254
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 255 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 296
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 297 TPGNCQNSANEVDLLGPNQNGSE 319
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 178 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 233
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 234 LRKGGFGPR 242
>gi|355745080|gb|EHH49705.1| hypothetical protein EGM_00414 [Macaca fascicularis]
Length = 1224
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 186 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 236
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 237 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 291
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 292 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 333
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 334 TPGNCQNSANEVDLLGPNQNGSE 356
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 215 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 270
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 271 LRKGGFGPR 279
>gi|326676804|ref|XP_002665632.2| PREDICTED: pumilio homolog 1 [Danio rerio]
Length = 1152
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 93/184 (50%), Gaps = 25/184 (13%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATF 79
+ KK W + DS K G GI DQ WRDS W SDH V+Q + + RRPG F
Sbjct: 128 TGKKFWETD----DSGKDGPKGIFL--DQ-WRDSAWGASDHSVSQPIMV---QRRPGQGF 177
Query: 80 PGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSK-DNGLEPRMRGLVLNSDGSDVKKE 138
G VLSPRS +S GLGV MVEYVL +SP K D+ L G +S+ D +K
Sbjct: 178 HGVGEAGSVLSPRS-ESGGLGVSMVEYVLSSSPAEKMDSCLRKGAYG-PRDSEADDPEKR 235
Query: 139 KDKAPASPYD-VKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGS 197
++ P + +D +KEL + + N QNG+D + K +SRTPG+
Sbjct: 236 VEQKPKTTFDPERKELKETEPDVLDNPNGLPNQNGLDVDVK-----------DFSRTPGN 284
Query: 198 RQPS 201
P+
Sbjct: 285 CPPT 288
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSK 287
+SDH V+Q + + RRPG F G VLSPRS +S GLGV MVEYVL +SP K
Sbjct: 158 ASDHSVSQPIMV---QRRPGQGFHGVGEAGSVLSPRS-ESGGLGVSMVEYVLSSSPAEK 212
>gi|355714560|gb|AES05044.1| pumilio-like protein 1 [Mustela putorius furo]
Length = 1208
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 100/201 (49%), Gaps = 44/201 (21%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 162 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 212
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR ++D SD +
Sbjct: 213 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPR------DAD-SDENDK 264
Query: 139 KDKAPASPYDVKK--ELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTP 195
DK +D K +L + + +TNG+ VQNGID + K +SRTP
Sbjct: 265 GDKKNKGAFDGDKLGDLKEEGDVMDKTNGL--PVQNGIDADVK-----------DFSRTP 311
Query: 196 GSRQPS--------PTDDGSE 208
G+ Q S P +GSE
Sbjct: 312 GNCQNSANEVDLLGPNQNGSE 332
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 191 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 246
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 247 LRKGGFGPR 255
>gi|74180360|dbj|BAE32346.1| unnamed protein product [Mus musculus]
Length = 1092
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 56 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 106
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 107 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 161
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 162 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 203
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 204 TPGNCQNSANEVDLLGPNQNGSE 226
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 85 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 140
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 141 LRKGGFGPR 149
>gi|73950060|ref|XP_865319.1| PREDICTED: pumilio homolog 1 isoform 14 [Canis lupus familiaris]
Length = 1186
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 100/201 (49%), Gaps = 44/201 (21%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR ++D SD +
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPR------DAD-SDENDK 252
Query: 139 KDKAPASPYDVKK--ELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTP 195
DK +D K +L + + +TNG+ VQNGID + K +SRTP
Sbjct: 253 GDKKNKGAFDGDKLGDLKEEGDVMDKTNGL--PVQNGIDADVK-----------DFSRTP 299
Query: 196 GSRQPS--------PTDDGSE 208
G+ Q S P +GSE
Sbjct: 300 GNCQNSANEVDLLGPNQNGSE 320
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|301620056|ref|XP_002939403.1| PREDICTED: pumilio homolog 1 [Xenopus (Silurana) tropicalis]
Length = 1152
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 107/209 (51%), Gaps = 50/209 (23%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATF 79
+ KK W +DS+K G GI L DQ WR+STW SDH V+Q + + RRPG F
Sbjct: 149 TGKKFWE----PDDSNKDGPKGIF-LGDQ-WRESTWGASDHSVSQPIMV---QRRPGQGF 199
Query: 80 PGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVK 136
+ VLSPRS +S GLGV MVEYVL +SP + PR +++G D
Sbjct: 200 HVSSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGAFGPR------DTEG-DEN 251
Query: 137 KEKDKAPASPY------DVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVC 190
++ DK Y D+K+E VD+ ++NG+ VQNGID G V
Sbjct: 252 EKVDKKNKGVYEGDKLGDLKEE-VDSMD--KSNGL--PVQNGID-----------GDVKD 295
Query: 191 YSRTPGSRQPS--------PTDDGSELAA 211
+SRTPG+ Q S P+ +GSE+ A
Sbjct: 296 FSRTPGNCQASSNEVDLLGPSQNGSEVLA 324
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP 284
+SDH V+Q + + RRPG F + VLSPRS +S GLGV MVEYVL +SP
Sbjct: 180 ASDHSVSQPIMV---QRRPGQGFHVSSEVNSVLSPRS-ESGGLGVSMVEYVLSSSP 231
>gi|354472365|ref|XP_003498410.1| PREDICTED: pumilio homolog 1 isoform 4 [Cricetulus griseus]
Length = 1107
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 102/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQNFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQNFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|281353340|gb|EFB28924.1| hypothetical protein PANDA_013254 [Ailuropoda melanoleuca]
Length = 1193
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 100/201 (49%), Gaps = 44/201 (21%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 154 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 204
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR ++D SD +
Sbjct: 205 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPR------DAD-SDENDK 256
Query: 139 KDKAPASPYDVKK--ELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTP 195
DK +D K +L + + +TNG+ VQNGID + K +SRTP
Sbjct: 257 GDKKNKGAFDGDKLGDLKEEGDVMDKTNGL--PVQNGIDADVK-----------DFSRTP 303
Query: 196 GSRQPS--------PTDDGSE 208
G+ Q S P +GSE
Sbjct: 304 GNCQNSANEVDLLGPNQNGSE 324
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 183 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 238
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 239 LRKGGFGPR 247
>gi|291399423|ref|XP_002716108.1| PREDICTED: pumilio 1-like isoform 1 [Oryctolagus cuniculus]
Length = 1186
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 102/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQNFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPAS---PYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFEGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQNFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|395508976|ref|XP_003758783.1| PREDICTED: pumilio homolog 2 isoform 2 [Sarcophilus harrisii]
Length = 1002
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 93/196 (47%), Gaps = 35/196 (17%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W ++ +D K+ + L D WR++ W T H ++Q + + RRPG F G
Sbjct: 22 KKFWEPDDSTKDGQKS-----VFLGDDEWRETAWGTPHHSMSQPIMV---QRRPGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGAFGPRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
EK KA D ++L + I+ G+ NG+D + K ++R
Sbjct: 130 DEKGKASPFEEDTDRDLKQGDEEDSKIKGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTDDGSEL 209
TPGSRQ SPT+ L
Sbjct: 175 TPGSRQASPTEVAERL 190
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
RRPG F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 65 RRPGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 112
>gi|301777185|ref|XP_002924016.1| PREDICTED: pumilio homolog 1-like [Ailuropoda melanoleuca]
Length = 1114
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 100/201 (49%), Gaps = 44/201 (21%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 71 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 121
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR ++D SD +
Sbjct: 122 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPR------DAD-SDENDK 173
Query: 139 KDKAPASPYDVKK--ELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTP 195
DK +D K +L + + +TNG+ VQNGID + K +SRTP
Sbjct: 174 GDKKNKGAFDGDKLGDLKEEGDVMDKTNGL--PVQNGIDADVK-----------DFSRTP 220
Query: 196 GSRQPS--------PTDDGSE 208
G+ Q S P +GSE
Sbjct: 221 GNCQNSANEVDLLGPNQNGSE 241
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 100 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 155
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 156 LRKGGFGPR 164
>gi|395508974|ref|XP_003758782.1| PREDICTED: pumilio homolog 2 isoform 1 [Sarcophilus harrisii]
Length = 1082
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 93/196 (47%), Gaps = 35/196 (17%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W ++ +D K+ + L D WR++ W T H ++Q + + RRPG F G
Sbjct: 22 KKFWEPDDSTKDGQKS-----VFLGDDEWRETAWGTPHHSMSQPIMV---QRRPGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGAFGPRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
EK KA D ++L + I+ G+ NG+D + K ++R
Sbjct: 130 DEKGKASPFEEDTDRDLKQGDEEDSKIKGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTDDGSEL 209
TPGSRQ SPT+ L
Sbjct: 175 TPGSRQASPTEVAERL 190
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
RRPG F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 65 RRPGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 112
>gi|47216145|emb|CAG10019.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1287
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 95/168 (56%), Gaps = 26/168 (15%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATF 79
+ KK W + DS K G GI DQ WRDS W SDH V+Q + + +RRPG F
Sbjct: 124 TGKKFWETD----DSGKDGPKGIFL--DQ-WRDSAWGASDHSVSQPIMV---SRRPGQGF 173
Query: 80 PGTDNGAG-VLSPRSSDSSGLGVKMVEYVLGTSPTSK-DNGLEPRMRGLVLNSDGSDVKK 137
G + G G V+SPRS +S GLGV MVEYVL +SP K D+ L +G DG +V++
Sbjct: 174 HGGEVGVGSVMSPRS-ESGGLGVSMVEYVLSSSPADKLDSCLR---KGPYGQRDG-EVEE 228
Query: 138 EKDKAPASPYDVK--KELVDAS-----GAIQTNGMVPVVQNGIDNEDK 178
EK + P + ++ + KEL ++ AI NG+ VQNG+D + K
Sbjct: 229 EKREKPKAAFEGEKLKELTESEVDVIVDAINPNGL--PVQNGLDVDVK 274
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 5/60 (8%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAG-VLSPRSSDSSGLGVKMVEYVLGTSPTSK 287
+SDH V+Q + + +RRPG F G + G G V+SPRS +S GLGV MVEYVL +SP K
Sbjct: 154 ASDHSVSQPIMV---SRRPGQGFHGGEVGVGSVMSPRS-ESGGLGVSMVEYVLSSSPADK 209
>gi|73950042|ref|XP_852168.1| PREDICTED: pumilio homolog 1 isoform 2 [Canis lupus familiaris]
Length = 1224
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 100/201 (49%), Gaps = 44/201 (21%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 186 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 236
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR ++D SD +
Sbjct: 237 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPR------DAD-SDENDK 288
Query: 139 KDKAPASPYDVKK--ELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTP 195
DK +D K +L + + +TNG+ VQNGID + K +SRTP
Sbjct: 289 GDKKNKGAFDGDKLGDLKEEGDVMDKTNGL--PVQNGIDADVK-----------DFSRTP 335
Query: 196 GSRQPS--------PTDDGSE 208
G+ Q S P +GSE
Sbjct: 336 GNCQNSANEVDLLGPNQNGSE 356
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 215 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 270
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 271 LRKGGFGPR 279
>gi|354472359|ref|XP_003498407.1| PREDICTED: pumilio homolog 1 isoform 1 [Cricetulus griseus]
Length = 1185
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 102/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQNFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQNFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|348574638|ref|XP_003473097.1| PREDICTED: pumilio homolog 2 isoform 1 [Cavia porcellus]
Length = 1068
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 93/191 (48%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDV---KKE 138
+LSPRS +S GLGV MVEYVL +SP K L+ R R + ++ +K
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKA 129
Query: 139 KDKAPASPYDV-----KKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K ASP++ +K+ D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDRKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|348574640|ref|XP_003473098.1| PREDICTED: pumilio homolog 2 isoform 2 [Cavia porcellus]
Length = 989
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 93/191 (48%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDV---KKE 138
+LSPRS +S GLGV MVEYVL +SP K L+ R R + ++ +K
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKA 129
Query: 139 KDKAPASPYDV-----KKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K ASP++ +K+ D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDRKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|410910802|ref|XP_003968879.1| PREDICTED: pumilio homolog 1-like [Takifugu rubripes]
Length = 1162
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 95/168 (56%), Gaps = 26/168 (15%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATF 79
+ KK W + DS K G GI DQ WRDS W SDH V+Q + + +RRPG F
Sbjct: 122 TGKKFWETD----DSGKDGPKGIFL--DQ-WRDSAWGASDHSVSQPIMV---SRRPGQGF 171
Query: 80 PGTDNGAG-VLSPRSSDSSGLGVKMVEYVLGTSPTSK-DNGLEPRMRGLVLNSDGSDVKK 137
G + G G V+SPRS +S GLGV MVEYVL +SP K D+ L +G DG +V++
Sbjct: 172 HGGEVGVGSVMSPRS-ESGGLGVSMVEYVLSSSPADKLDSCLR---KGPYGQRDG-EVEE 226
Query: 138 EKDKAPASPYDVK--KELVDAS-----GAIQTNGMVPVVQNGIDNEDK 178
EK + P + ++ + KEL ++ AI NG+ VQNG+D + K
Sbjct: 227 EKREKPKATFEGEKLKELTESEVDVIVDAINPNGL--PVQNGLDVDVK 272
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 5/60 (8%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAG-VLSPRSSDSSGLGVKMVEYVLGTSPTSK 287
+SDH V+Q + + +RRPG F G + G G V+SPRS +S GLGV MVEYVL +SP K
Sbjct: 152 ASDHSVSQPIMV---SRRPGQGFHGGEVGVGSVMSPRS-ESGGLGVSMVEYVLSSSPADK 207
>gi|292495314|gb|ADE28860.1| PUM1 fusion protein [Homo sapiens]
Length = 525
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E S K G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDE----SSKDGPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + V +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDAD-----------VKDFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|90078374|dbj|BAE88867.1| unnamed protein product [Macaca fascicularis]
Length = 414
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E S K G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDE----SSKDGPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPR----DADSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + V +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDAD-----------VKDFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|292495316|gb|ADE28861.1| PUM1 fusion protein [Homo sapiens]
Length = 516
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 103/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E S K G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDE----SSKDGPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + V +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDAD-----------VKDFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|224048793|ref|XP_002187244.1| PREDICTED: pumilio homolog 2 [Taeniopygia guttata]
Length = 1061
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 96/197 (48%), Gaps = 35/197 (17%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKK W +DS K G GI L D+ WR++ W T H ++Q + + R+PG F
Sbjct: 21 AKKFWE----PDDSAKDGQKGIF-LGDE-WRETAWGTPHHSMSQPIMV---QRKPGQGFH 71
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDV 135
G VLSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 72 GNSEVNAVLSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGAFGTRDAETDGPEK 127
Query: 136 KKEKDKAPASPYDVKKELV--DASGAIQTNGM-VPVVQNGIDNEDKYKYSSGPGGVVCYS 192
+K KA D ++L D + NG +P NG+D + K ++
Sbjct: 128 GDQKGKASPFEEDKNRDLKQGDDEDVTKINGRGLP---NGMDADCK-----------DFN 173
Query: 193 RTPGSRQPSPTDDGSEL 209
RTPGSRQ SPT+ L
Sbjct: 174 RTPGSRQASPTEVAERL 190
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
R+PG F G VLSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 64 RKPGQGFHGNSEVNAVLSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 111
>gi|449268799|gb|EMC79640.1| Pumilio like protein 2 [Columba livia]
Length = 1062
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 96/197 (48%), Gaps = 35/197 (17%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKK W +DS K G GI L D+ WR++ W T H ++Q + + R+PG F
Sbjct: 21 AKKFWE----PDDSAKDGQKGIF-LGDE-WRETAWGTPHHSMSQPIMV---QRKPGQGFH 71
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDV 135
G VLSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 72 GNSEVNAVLSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGAFGTRDAETDGPEK 127
Query: 136 KKEKDKAPASPYDVKKELV--DASGAIQTNGM-VPVVQNGIDNEDKYKYSSGPGGVVCYS 192
+K KA D ++L D + NG +P NG+D + K ++
Sbjct: 128 GDQKGKASPFEEDKNRDLKQGDDEDVTKINGRGLP---NGMDADCK-----------DFN 173
Query: 193 RTPGSRQPSPTDDGSEL 209
RTPGSRQ SPT+ L
Sbjct: 174 RTPGSRQASPTEVAERL 190
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
R+PG F G VLSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 64 RKPGQGFHGNSEVNAVLSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 111
>gi|326916555|ref|XP_003204572.1| PREDICTED: pumilio homolog 2-like [Meleagris gallopavo]
Length = 1061
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 96/197 (48%), Gaps = 35/197 (17%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKK W +DS K G GI L D+ WR++ W T H ++Q + + R+PG F
Sbjct: 21 AKKFWE----PDDSAKDGQKGIF-LGDE-WRETAWGTPHHSMSQPIMV---QRKPGQGFH 71
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDV 135
G VLSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 72 GNSEVNAVLSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGAFGTRDAETDGPEK 127
Query: 136 KKEKDKAPASPYDVKKELV--DASGAIQTNGM-VPVVQNGIDNEDKYKYSSGPGGVVCYS 192
+K KA D ++L D + NG +P NG+D + K ++
Sbjct: 128 GDQKGKASPFEEDKNRDLKQGDDEDVTKINGRGLP---NGMDADCK-----------DFN 173
Query: 193 RTPGSRQPSPTDDGSEL 209
RTPGSRQ SPT+ L
Sbjct: 174 RTPGSRQASPTEVAERL 190
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
R+PG F G VLSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 64 RKPGQGFHGNSEVNAVLSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 111
>gi|387017906|gb|AFJ51071.1| Pumilio homolog 1-like [Crotalus adamanteus]
Length = 1185
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 94/188 (50%), Gaps = 34/188 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L DQ WRDS W TSDH V+Q + + RRPG F
Sbjct: 150 KKFWE----SDDSSKDGPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQGFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
+ VLSPRS +S GLGV MVEYVL +SP + G PR +++ D K
Sbjct: 201 NNEINSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPR------DAENDDNDK- 252
Query: 139 KDKAPASPYDVKK--ELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPG 196
DK S +D K +L + + +P VQNGID + K +SRTPG
Sbjct: 253 GDKKNKSTFDGDKLGDLKEEGDVMDKANGLP-VQNGIDADAK-----------DFSRTPG 300
Query: 197 SRQPSPTD 204
+ Q S +D
Sbjct: 301 NCQNSASD 308
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG F + VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQGFHVNNEINSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|32766382|gb|AAH55197.1| Pum1 protein [Danio rerio]
Length = 540
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 93/184 (50%), Gaps = 25/184 (13%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATF 79
+ KK W + DS K G GI DQ WRDS W SDH V++ + + RRPG F
Sbjct: 128 TGKKFWETD----DSGKDGPKGIFL--DQ-WRDSAWGASDHSVSRPIMV---QRRPGQGF 177
Query: 80 PGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSK-DNGLEPRMRGLVLNSDGSDVKKE 138
G VLSPRS +S GLGV MVEYVL +SP K D+ L G +S+ D +K
Sbjct: 178 HGVGEAGSVLSPRS-ESGGLGVSMVEYVLSSSPAEKMDSCLRKGAYG-PRDSEADDPEKR 235
Query: 139 KDKAPASPYDV-KKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGS 197
++ P + +D +KEL + + N QNG+D + V +SRTPG+
Sbjct: 236 VEQKPKTTFDPERKELKETEPDVLDNPNGLPNQNGLDVD-----------VKDFSRTPGN 284
Query: 198 RQPS 201
P+
Sbjct: 285 CPPT 288
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSK 287
+SDH V++ + + RRPG F G VLSPRS +S GLGV MVEYVL +SP K
Sbjct: 158 ASDHSVSRPIMV---QRRPGQGFHGVGEAGSVLSPRS-ESGGLGVSMVEYVLSSSPAEK 212
>gi|11991652|gb|AAG42319.1|AF321909_1 pumilio 1 [Mus musculus]
Length = 1189
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 102/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+ + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSHPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+ + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSHPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|296482352|tpg|DAA24467.1| TPA: pumilio homolog 2-like [Bos taurus]
Length = 281
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|73979803|ref|XP_858023.1| PREDICTED: pumilio homolog 2 isoform 5 [Canis lupus familiaris]
Length = 984
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|410955764|ref|XP_003984520.1| PREDICTED: pumilio homolog 2 isoform 1 [Felis catus]
Length = 984
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|358414519|ref|XP_869549.5| PREDICTED: pumilio homolog 2 isoform 7 [Bos taurus]
gi|359070241|ref|XP_003586699.1| PREDICTED: pumilio homolog 2 isoform 3 [Bos taurus]
Length = 984
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|291387142|ref|XP_002710095.1| PREDICTED: pumilio homolog 2-like isoform 2 [Oryctolagus cuniculus]
Length = 1065
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|417405515|gb|JAA49467.1| Putative rna-binding protein of the puf family [Desmodus rotundus]
Length = 985
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|350582682|ref|XP_003481331.1| PREDICTED: pumilio homolog 2 [Sus scrofa]
Length = 981
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|440906069|gb|ELR56374.1| Pumilio-like protein 2 [Bos grunniens mutus]
Length = 1066
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|358414517|ref|XP_003582857.1| PREDICTED: pumilio homolog 2 [Bos taurus]
gi|359070234|ref|XP_003586698.1| PREDICTED: pumilio homolog 2 isoform 2 [Bos taurus]
Length = 1063
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|410955766|ref|XP_003984521.1| PREDICTED: pumilio homolog 2 isoform 2 [Felis catus]
Length = 1063
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|149727740|ref|XP_001503365.1| PREDICTED: pumilio homolog 2 [Equus caballus]
Length = 1063
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|148229513|ref|NP_001081119.1| pumilio homolog 1 [Xenopus laevis]
gi|51513460|gb|AAH80379.1| Pum1-A protein [Xenopus laevis]
Length = 1190
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 98/194 (50%), Gaps = 42/194 (21%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATF 79
+ KK W + DS+K G GI L DQ WR+STW SDH V+Q + + RRPG F
Sbjct: 149 TGKKFWETD----DSNKDGPKGIF-LGDQ-WRESTWGASDHSVSQPIMV---QRRPGQGF 199
Query: 80 PGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVK 136
+ VLSPRS +S GLGV MVEYVL +SP + PR +++G D
Sbjct: 200 HVSSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGAFGPR------DTEG-DEN 251
Query: 137 KEKDKAPASPY------DVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVC 190
++ DK Y D+K+E A + NG+ VQNGID G V
Sbjct: 252 EKVDKKNKGVYEGDKLGDLKEE---ADSMDKCNGL--PVQNGID-----------GDVKD 295
Query: 191 YSRTPGSRQPSPTD 204
+SRTPG+ Q S ++
Sbjct: 296 FSRTPGNCQASASE 309
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP 284
+SDH V+Q + + RRPG F + VLSPRS +S GLGV MVEYVL +SP
Sbjct: 180 ASDHSVSQPIMV---QRRPGQGFHVSSEVNSVLSPRS-ESGGLGVSMVEYVLSSSP 231
>gi|28804566|dbj|BAC57980.1| Pumilio [Xenopus laevis]
Length = 1185
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 98/194 (50%), Gaps = 42/194 (21%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATF 79
+ KK W + DS+K G GI L DQ WR+STW SDH V+Q + + RRPG F
Sbjct: 149 TGKKFWETD----DSNKDGPKGIF-LGDQ-WRESTWGASDHSVSQPIMV---QRRPGQGF 199
Query: 80 PGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVK 136
+ VLSPRS +S GLGV MVEYVL +SP + PR +++G D
Sbjct: 200 HVSSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGAFGPR------DTEG-DEN 251
Query: 137 KEKDKAPASPY------DVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVC 190
++ DK Y D+K+E A + NG+ VQNGID G V
Sbjct: 252 EKVDKKNKGVYEGDKLGDLKEE---ADSMDKCNGL--PVQNGID-----------GDVKD 295
Query: 191 YSRTPGSRQPSPTD 204
+SRTPG+ Q S ++
Sbjct: 296 FSRTPGNCQASASE 309
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP 284
+SDH V+Q + + RRPG F + VLSPRS +S GLGV MVEYVL +SP
Sbjct: 180 ASDHSVSQPIMV---QRRPGQGFHVSSEVNSVLSPRS-ESGGLGVSMVEYVLSSSP 231
>gi|90074793|dbj|BAD95609.2| pumilio-1 [Oncorhynchus mykiss]
Length = 1159
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 99/192 (51%), Gaps = 35/192 (18%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATF 79
+ KK W +E +D K GI DQ WRDS W +DH V+Q + + +RRPG F
Sbjct: 118 TGKKFWESDEAGKDGPK----GIFL--DQ-WRDSAWGATDHSVSQPIMV---SRRPGGGF 167
Query: 80 -PGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDVKKE 138
G + G V+SPRS +S GLGV MVEYVL +SP K L+ +R +V+ E
Sbjct: 168 HSGGEVGGSVMSPRS-ESGGLGVSMVEYVLSSSPAEK---LDSCLRKGPYGPRDGEVEDE 223
Query: 139 KDKAPASPYDVKK-ELVD-----ASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYS 192
K + P + ++V+K E+ + S I NG+ VQNG+D + K YS
Sbjct: 224 KREKPKAAFEVEKLEMTEGENDVISDVINPNGL--PVQNGLDVDVKE-----------YS 270
Query: 193 RTPGSRQPSPTD 204
R G QP+ TD
Sbjct: 271 RQ-GQMQPAGTD 281
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
Query: 229 SSDHGVTQGMAMVPSARRPGATF-PGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSK 287
++DH V+Q + + +RRPG F G + G V+SPRS +S GLGV MVEYVL +SP K
Sbjct: 148 ATDHSVSQPIMV---SRRPGGGFHSGGEVGGSVMSPRS-ESGGLGVSMVEYVLSSSPAEK 203
>gi|350582680|ref|XP_003125422.3| PREDICTED: pumilio homolog 2 isoform 1 [Sus scrofa]
Length = 1060
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|301758394|ref|XP_002915042.1| PREDICTED: pumilio homolog 2-like [Ailuropoda melanoleuca]
Length = 1064
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|291387140|ref|XP_002710094.1| PREDICTED: pumilio homolog 2-like isoform 1 [Oryctolagus cuniculus]
Length = 986
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|426223186|ref|XP_004005758.1| PREDICTED: pumilio homolog 2 isoform 1 [Ovis aries]
Length = 1063
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|73979795|ref|XP_849088.1| PREDICTED: pumilio homolog 2 isoform 1 [Canis lupus familiaris]
Length = 1063
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|344280367|ref|XP_003411955.1| PREDICTED: pumilio homolog 2 [Loxodonta africana]
Length = 1067
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|281344230|gb|EFB19814.1| hypothetical protein PANDA_002991 [Ailuropoda melanoleuca]
Length = 1049
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 5 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 56
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 57 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 112
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 113 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 157
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 158 TPGSRQASPTE 168
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 35 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 89
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 90 --LDSRFR 95
>gi|195452252|ref|XP_002073275.1| GK14047 [Drosophila willistoni]
gi|194169360|gb|EDW84261.1| GK14047 [Drosophila willistoni]
Length = 704
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 102/203 (50%), Gaps = 45/203 (22%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNL--------NDQMWRDSTWSTSDHGVTQGMAMVPS 71
+AKKLW +GK + T GGG LN + +W+D TWST + + P
Sbjct: 395 TAKKLWEKSDGKGGTSSTSGGGPLNPLQIPGVGDHSSVWKDHTWSTQGENI-----LAPP 449
Query: 72 ARR-----PGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRM 123
R GA+ AG+LSPR S VKMVEYVL SPT+K+ +GLEPRM
Sbjct: 450 RSRGYPHGGGASDTSNSGNAGILSPRDSTC----VKMVEYVLAGSPTNKESPLSGLEPRM 505
Query: 124 RGLVL-NSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYS 182
R L ++D S KEK +P +KK+ TNG VV NGID +DK
Sbjct: 506 RNLKFDDNDKSHDDKEKGNSPFDTNGLKKD----DQVTNTNG---VVVNGID-DDK---- 553
Query: 183 SGPGGVVCYSRTPGSRQPSPTDD 205
++RTPGSRQPSP ++
Sbjct: 554 -------GFNRTPGSRQPSPAEE 569
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 7/47 (14%)
Query: 258 AGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD---NGLEPRMRGLVLE 301
AG+LSPR S VKMVEYVL SPT+K+ +GLEPRMR L +
Sbjct: 469 AGILSPRDSTC----VKMVEYVLAGSPTNKESPLSGLEPRMRNLKFD 511
>gi|403293270|ref|XP_003937643.1| PREDICTED: pumilio homolog 1 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1186
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 96/184 (52%), Gaps = 40/184 (21%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGS 197
TPG+
Sbjct: 298 TPGN 301
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|403293274|ref|XP_003937645.1| PREDICTED: pumilio homolog 1 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1224
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 96/184 (52%), Gaps = 40/184 (21%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 186 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 236
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 237 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 291
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 292 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 333
Query: 194 TPGS 197
TPG+
Sbjct: 334 TPGN 337
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 215 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 270
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 271 LRKGGFGPR 279
>gi|62896769|dbj|BAD96325.1| pumilio homolog 1 variant [Homo sapiens]
Length = 1188
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 102/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDESSKD----GPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPR S+S LGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPR-SESGELGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + K +SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDADVK-----------DFSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S LGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGELGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|123913364|sp|Q2VB19.1|PUM1_CHICK RecName: Full=Pumilio homolog 1
gi|82569972|gb|ABB83588.1| pumilio 1 [Gallus gallus]
Length = 1189
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 98/202 (48%), Gaps = 46/202 (22%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L DQ WRDS W TSDH V+Q + + RRPG F
Sbjct: 150 KKFWE----SDDSSKDGPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQGFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR D + + +
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPR--------DAENDEND 251
Query: 139 K-DKAPASPYDVKK--ELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRT 194
K DK +D K +L + + +TNG+ VQNGID + K +SRT
Sbjct: 252 KGDKKNKGTFDGDKLGDLKEEGDVMDKTNGL--PVQNGIDTDVK-----------DFSRT 298
Query: 195 PGSRQPS--------PTDDGSE 208
PG+ Q S P +GSE
Sbjct: 299 PGNCQNSASEVDLLGPNQNGSE 320
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQGFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|297668109|ref|XP_002812297.1| PREDICTED: pumilio homolog 2 isoform 2 [Pongo abelii]
Length = 1065
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|350585815|ref|XP_003482055.1| PREDICTED: pumilio homolog 1-like [Sus scrofa]
Length = 485
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 102/203 (50%), Gaps = 48/203 (23%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E S K G GI L DQ WRDS W TSDH V+Q + + RRPG +F
Sbjct: 150 KKFWETDE----SSKDGPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPR----DADSDENDKGEK 255
Query: 139 KDKAPA---SPYDVKKE--LVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K+K D+K+E ++D +TNG+ VQNGID + V SR
Sbjct: 256 KNKGTFDGDKLGDLKEEGDVMD-----KTNGL--PVQNGIDAD-----------VKDXSR 297
Query: 194 TPGSRQPS--------PTDDGSE 208
TPG+ Q S P +GSE
Sbjct: 298 TPGNCQNSANEVDLLGPNQNGSE 320
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|426334843|ref|XP_004028946.1| PREDICTED: pumilio homolog 2 isoform 2 [Gorilla gorilla gorilla]
Length = 986
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|395828861|ref|XP_003787581.1| PREDICTED: pumilio homolog 2 [Otolemur garnettii]
Length = 1027
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W ++ +D K+ + L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWEPDDSTKDGQKS-----IFLGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|156523285|ref|NP_001096040.1| pumilio homolog 2 [Danio rerio]
gi|154354086|gb|ABS76148.1| pum-like protein [Danio rerio]
Length = 1106
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 101/210 (48%), Gaps = 34/210 (16%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKKLW +E +D K L + WR++ WS+S H ++Q + + +RPG +
Sbjct: 141 AKKLWESDELAKDGRKA------MLVGEEWRENAWSSSHHALSQPIMV---QKRPGQGYN 191
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR-GLVLNSDGSDVKKEK 139
GT + VLSPRS + GLGV MVEYVL +SP K +G R R G +D +EK
Sbjct: 192 GTGETSSVLSPRS-EGGGLGVSMVEYVLSSSPGDKMDG---RYRNGGYGEADADPDGREK 247
Query: 140 --DKAPASPYDVKK--ELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTP 195
K +SP++ K E+ + + NG+D + K ++ TP
Sbjct: 248 GESKEKSSPFEENKSPEMKVGDEGDTSKANARGLLNGMDRDCK-----------DFNPTP 296
Query: 196 GSRQPSPTDDGSELAAVQAAV-----HHSH 220
GSRQ SPT+ L QA + HH H
Sbjct: 297 GSRQASPTEAVERLGPSQAGLEIMVQHHQH 326
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
SS H ++Q + + +RPG + GT + VLSPRS + GLGV MVEYVL +SP K
Sbjct: 171 SSHHALSQPIMV---QKRPGQGYNGTGETSSVLSPRS-EGGGLGVSMVEYVLSSSPGDKM 226
Query: 289 NG 290
+G
Sbjct: 227 DG 228
>gi|297265504|ref|XP_001095426.2| PREDICTED: pumilio homolog 2-like isoform 1 [Macaca mulatta]
Length = 986
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|449273163|gb|EMC82771.1| Pumilio like protein 1, partial [Columba livia]
Length = 987
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 98/202 (48%), Gaps = 46/202 (22%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L DQ WRDS W TSDH V+Q + + RRPG F
Sbjct: 6 KKFWE----SDDSSKDGPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQGFHV 56
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR D + + +
Sbjct: 57 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPR--------DAENDEND 107
Query: 139 K-DKAPASPYDVKK--ELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRT 194
K DK +D K +L + + +TNG+ VQNGID + K +SRT
Sbjct: 108 KGDKKNKGTFDGDKLGDLKEEGDVMDKTNGL--PVQNGIDADVKD-----------FSRT 154
Query: 195 PGSRQPS--------PTDDGSE 208
PG+ Q S P +GSE
Sbjct: 155 PGNCQNSASEVDLLGPNQNGSE 176
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 35 TSDHSVSQPIMV---QRRPGQGFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 90
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 91 LRKGGFGPR 99
>gi|410258978|gb|JAA17455.1| pumilio homolog 2 [Pan troglodytes]
gi|410298914|gb|JAA28057.1| pumilio homolog 2 [Pan troglodytes]
gi|410335701|gb|JAA36797.1| pumilio homolog 2 [Pan troglodytes]
Length = 1067
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|380811084|gb|AFE77417.1| pumilio homolog 2 [Macaca mulatta]
gi|383417013|gb|AFH31720.1| pumilio homolog 2 [Macaca mulatta]
gi|384946088|gb|AFI36649.1| pumilio homolog 2 [Macaca mulatta]
Length = 1065
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|355565487|gb|EHH21916.1| hypothetical protein EGK_05087 [Macaca mulatta]
gi|355751134|gb|EHH55389.1| hypothetical protein EGM_04593 [Macaca fascicularis]
gi|380811082|gb|AFE77416.1| pumilio homolog 2 [Macaca mulatta]
gi|383417011|gb|AFH31719.1| pumilio homolog 2 [Macaca mulatta]
Length = 1067
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|114576339|ref|XP_001140678.1| PREDICTED: pumilio homolog 2 isoform 10 [Pan troglodytes]
gi|397513515|ref|XP_003827058.1| PREDICTED: pumilio homolog 2 isoform 1 [Pan paniscus]
gi|426334841|ref|XP_004028945.1| PREDICTED: pumilio homolog 2 isoform 1 [Gorilla gorilla gorilla]
gi|410258976|gb|JAA17454.1| pumilio homolog 2 [Pan troglodytes]
gi|410298912|gb|JAA28056.1| pumilio homolog 2 [Pan troglodytes]
gi|410335699|gb|JAA36796.1| pumilio homolog 2 [Pan troglodytes]
Length = 1065
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|383417007|gb|AFH31717.1| pumilio homolog 2 [Macaca mulatta]
Length = 1060
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|332253817|ref|XP_003276028.1| PREDICTED: pumilio homolog 2 isoform 1 [Nomascus leucogenys]
Length = 1065
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|86129498|ref|NP_001034381.1| pumilio homolog 2 [Gallus gallus]
gi|82569974|gb|ABB83589.1| pumilio 2 [Gallus gallus]
Length = 1061
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 95/197 (48%), Gaps = 35/197 (17%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKK W +DS K G GI L D+ WR++ W T H ++Q + + R+PG F
Sbjct: 21 AKKFWE----PDDSAKDGQKGIF-LGDE-WRETAWGTPHHSMSQPIMV---QRKPGQGFH 71
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDV 135
G VLSPR +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 72 GNSEVNAVLSPRP-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGAFGTRDAETDGPEK 127
Query: 136 KKEKDKAPASPYDVKKELV--DASGAIQTNGM-VPVVQNGIDNEDKYKYSSGPGGVVCYS 192
+K KA D ++L D + NG +P NG+D + K ++
Sbjct: 128 GDQKGKASPFEEDKNRDLKQGDDEDVTKINGRGLP---NGMDADCK-----------DFN 173
Query: 193 RTPGSRQPSPTDDGSEL 209
RTPGSRQ SPT+ L
Sbjct: 174 RTPGSRQASPTEVAERL 190
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
R+PG F G VLSPR +S GLGV MVEYVL +SP K L+ R R
Sbjct: 64 RKPGQGFHGNSEVNAVLSPRP-ESGGLGVSMVEYVLSSSPADK---LDSRFR 111
>gi|285026237|dbj|BAI68041.1| Pumilio2 [Danio rerio]
Length = 1206
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 101/210 (48%), Gaps = 34/210 (16%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKKLW +E +D K L + WR++ WS+S H ++Q + + +RPG +
Sbjct: 141 AKKLWESDELAKDGRKA------MLVGEEWRENAWSSSHHALSQPIMV---QKRPGQGYN 191
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR-GLVLNSDGSDVKKEK 139
GT + VLSPRS + GLGV MVEYVL +SP K +G R R G +D +EK
Sbjct: 192 GTGETSSVLSPRS-EGGGLGVSMVEYVLSSSPGDKMDG---RYRNGGYGEADADPDGREK 247
Query: 140 --DKAPASPYDVKK--ELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTP 195
K +SP++ K E+ + + NG+D + K ++ TP
Sbjct: 248 GESKEKSSPFEENKSPEMKVGDEGDTSKANARGLLNGMDRDCK-----------DFNPTP 296
Query: 196 GSRQPSPTDDGSELAAVQAAV-----HHSH 220
GSRQ SPT+ L QA + HH H
Sbjct: 297 GSRQASPTEAVERLGPSQAGLEIMVQHHQH 326
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
SS H ++Q + + +RPG + GT + VLSPRS + GLGV MVEYVL +SP K
Sbjct: 171 SSHHALSQPIMV---QKRPGQGYNGTGETSSVLSPRS-EGGGLGVSMVEYVLSSSPGDKM 226
Query: 289 NG 290
+G
Sbjct: 227 DG 228
>gi|383417009|gb|AFH31718.1| pumilio homolog 2 [Macaca mulatta]
Length = 1059
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|402890199|ref|XP_003908378.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2 [Papio anubis]
Length = 984
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|296224411|ref|XP_002758049.1| PREDICTED: pumilio homolog 2 isoform 2 [Callithrix jacchus]
Length = 1064
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 92/189 (48%), Gaps = 32/189 (16%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W ++ +D K+ + L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWEPDDSTKDGQKS-----IFLGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELVDASGAIQTNGM-VPVVQNGIDNEDKYKYSSGPGGVVCYSRTP 195
+K KA D ++L + NG +P NG+D + K ++RTP
Sbjct: 130 DQKGKASPFEEDQNRDLKQDDDDSKINGRGLP---NGMDADCK-----------DFNRTP 175
Query: 196 GSRQPSPTD 204
GSRQ SPT+
Sbjct: 176 GSRQASPTE 184
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|403288167|ref|XP_003935284.1| PREDICTED: pumilio homolog 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 987
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W ++ +D K+ + L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWEPDDSTKDGQKS-----IFLGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|403288165|ref|XP_003935283.1| PREDICTED: pumilio homolog 2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1066
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 91/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W ++ +D K+ + L D WR++ W TS H ++Q + + RR G F G
Sbjct: 22 KKFWEPDDSTKDGQKS-----IFLGDDEWRETAWGTSHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|431911864|gb|ELK14008.1| Pumilio like protein 2 [Pteropus alecto]
Length = 1056
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 90/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W S H ++Q + + RR G F G
Sbjct: 15 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGPSHHSMSQPIMV---QRRSGQGFHG 66
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 67 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 122
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 123 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 167
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 168 TPGSRQASPTE 178
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 230 SDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN 289
S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 46 SHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK-- 99
Query: 290 GLEPRMR 296
L+ R R
Sbjct: 100 -LDSRFR 105
>gi|119621227|gb|EAX00822.1| pumilio homolog 2 (Drosophila), isoform CRA_b [Homo sapiens]
gi|219517887|gb|AAI43551.1| PUM2 protein [Homo sapiens]
Length = 985
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 90/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W S H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGASHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 ASHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|41688714|sp|Q8TB72.2|PUM2_HUMAN RecName: Full=Pumilio homolog 2; Short=Pumilio-2
gi|119621229|gb|EAX00824.1| pumilio homolog 2 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1066
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 90/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W S H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGASHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 ASHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|13491168|ref|NP_056132.1| pumilio homolog 2 [Homo sapiens]
gi|11139704|gb|AAG31806.1|AF315591_1 Pumilio 2 [Homo sapiens]
gi|20521854|dbj|BAA19665.3| KIAA0235 protein [Homo sapiens]
gi|62822478|gb|AAY15026.1| unknown [Homo sapiens]
gi|85566710|gb|AAI12047.1| Pumilio homolog 2 (Drosophila) [Homo sapiens]
gi|85567007|gb|AAI12049.1| Pumilio homolog 2 [Homo sapiens]
gi|119621226|gb|EAX00821.1| pumilio homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
gi|119621228|gb|EAX00823.1| pumilio homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
gi|168267226|dbj|BAG09669.1| pumilio homolog 2 [synthetic construct]
gi|193787566|dbj|BAG52772.1| unnamed protein product [Homo sapiens]
Length = 1064
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 90/191 (47%), Gaps = 35/191 (18%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W S H ++Q + + RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGASHHSMSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 137 KEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
+K KA D ++L D I G+ NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK-----------DFNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 ASHHSMSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>gi|348517676|ref|XP_003446359.1| PREDICTED: pumilio homolog 2 isoform 3 [Oreochromis niloticus]
Length = 1076
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKKLW +E +D K G +L + WRD+ W +S H V+Q + + RRPG F
Sbjct: 21 AKKLWDSDELAKDGRK---GMLLG---EEWRDNAWGSSHHSVSQPIMV---QRRPGQGFH 71
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR-GLVLNSDGSDVKKEK 139
G + VLSPRS + GLGV MVEYVL +SP K +G R R G D +EK
Sbjct: 72 GNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDKMDG---RYRNGGYGAGDADQDGREK 127
Query: 140 DKA--PASPYDVKK----ELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
A SP++ K ++ + S + NG + NG+D + K ++
Sbjct: 128 SDAQEKVSPFEEDKSPEMKVGEESDPTKANGR--GLLNGMDRDCK-----------DFNP 174
Query: 194 TPGSRQPSPTDDGSELAAVQAAV------HHSH 220
TPGSRQ SPT+ + Q + HH H
Sbjct: 175 TPGSRQASPTEAVERMGPSQTGLEMMGQHHHPH 207
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
SS H V+Q + + RRPG F G + VLSPRS + GLGV MVEYVL +SP K
Sbjct: 51 SSHHSVSQPIMV---QRRPGQGFHGNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDKM 106
Query: 289 NG 290
+G
Sbjct: 107 DG 108
>gi|348517672|ref|XP_003446357.1| PREDICTED: pumilio homolog 2 isoform 1 [Oreochromis niloticus]
Length = 1214
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 104/213 (48%), Gaps = 39/213 (18%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKKLW +E +D K G+L L ++ WRD+ W +S H V+Q + + RRPG F
Sbjct: 144 AKKLWDSDELAKDGRK----GML-LGEE-WRDNAWGSSHHSVSQPIMV---QRRPGQGFH 194
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR-GLVLNSDGSDVKKEK 139
G + VLSPRS + GLGV MVEYVL +SP K +G R R G D +EK
Sbjct: 195 GNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDKMDG---RYRNGGYGAGDADQDGREK 250
Query: 140 DKA--PASPYDVKK----ELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
A SP++ K ++ + S + NG + NG+D + K ++
Sbjct: 251 SDAQEKVSPFEEDKSPEMKVGEESDPTKANGR--GLLNGMDRDCK-----------DFNP 297
Query: 194 TPGSRQPSPTDDGSELAAVQAAV------HHSH 220
TPGSRQ SPT+ + Q + HH H
Sbjct: 298 TPGSRQASPTEAVERMGPSQTGLEMMGQHHHPH 330
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
SS H V+Q + + RRPG F G + VLSPRS + GLGV MVEYVL +SP K
Sbjct: 174 SSHHSVSQPIMV---QRRPGQGFHGNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDKM 229
Query: 289 NG 290
+G
Sbjct: 230 DG 231
>gi|348517674|ref|XP_003446358.1| PREDICTED: pumilio homolog 2 isoform 2 [Oreochromis niloticus]
Length = 1188
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKKLW +E +D K G +L + WRD+ W +S H V+Q + + RRPG F
Sbjct: 144 AKKLWDSDELAKDGRK---GMLLG---EEWRDNAWGSSHHSVSQPIMV---QRRPGQGFH 194
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR-GLVLNSDGSDVKKEK 139
G + VLSPRS + GLGV MVEYVL +SP K +G R R G D +EK
Sbjct: 195 GNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDKMDG---RYRNGGYGAGDADQDGREK 250
Query: 140 DKA--PASPYDVKK----ELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
A SP++ K ++ + S + NG + NG+D + K ++
Sbjct: 251 SDAQEKVSPFEEDKSPEMKVGEESDPTKANGR--GLLNGMDRDCK-----------DFNP 297
Query: 194 TPGSRQPSPTDDGSELAAVQAAV------HHSH 220
TPGSRQ SPT+ + Q + HH H
Sbjct: 298 TPGSRQASPTEAVERMGPSQTGLEMMGQHHHPH 330
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
SS H V+Q + + RRPG F G + VLSPRS + GLGV MVEYVL +SP K
Sbjct: 174 SSHHSVSQPIMV---QRRPGQGFHGNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDKM 229
Query: 289 NG 290
+G
Sbjct: 230 DG 231
>gi|327286697|ref|XP_003228066.1| PREDICTED: pumilio homolog 1-like isoform 1 [Anolis carolinensis]
Length = 1184
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 88/187 (47%), Gaps = 32/187 (17%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L DQ WRDS W TSDH V+Q + + RRPG F
Sbjct: 150 KKFWE----SDDSTKDGPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQGFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---TSKDNGLEPRMRGLVLNSDGSD-VKK 137
VLSPRS +S GLGV MVEYVL +SP + G PR N DG KK
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRD---AENDDGDKGDKK 256
Query: 138 EKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGS 197
K KE VD + NG+ VQNGID + K +SRTPG+
Sbjct: 257 NKGTFDGDKLGDLKEEVDVMD--KANGL--PVQNGIDADTK-----------DFSRTPGN 301
Query: 198 RQPSPTD 204
S D
Sbjct: 302 CPNSAND 308
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP---T 285
+SDH V+Q + + RRPG F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQGFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 286 SKDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>gi|47208830|emb|CAF90334.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1182
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 106/210 (50%), Gaps = 34/210 (16%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKKLW +E ++ K G+L L ++ WR++ W +S H V+Q + + RRPG +F
Sbjct: 142 AKKLWDSDELAKEGRK----GLL-LGEE-WRENAWGSSHHSVSQPIMV---QRRPGQSFH 192
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDVKKEKD 140
G + VLSPRS + GLGV MVEYVL +SP K +G R G D +++ D
Sbjct: 193 GNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDKLDG-RYRNSGYGAGDAAPDGREKSD 250
Query: 141 -KAPASPYDVKK----ELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTP 195
+ SP++ K ++ + + + NG + NG+D + K ++ TP
Sbjct: 251 AQEKVSPFEEDKNQEMKVGEENDPAKANGR--GLLNGMDRDCK-----------DFNPTP 297
Query: 196 GSRQPSPTDDGSELAAVQA-----AVHHSH 220
GSRQ SPT+ + Q+ A HH H
Sbjct: 298 GSRQASPTEAVERMGTSQSGMEMMAQHHPH 327
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
SS H V+Q + + RRPG +F G + VLSPRS + GLGV MVEYVL +SP K
Sbjct: 172 SSHHSVSQPIMV---QRRPGQSFHGNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDKL 227
Query: 289 NG 290
+G
Sbjct: 228 DG 229
>gi|185132391|ref|NP_001117710.1| pumilio-2 [Oncorhynchus mykiss]
gi|90991428|dbj|BAE93116.1| pumilio-2A [Oncorhynchus mykiss]
Length = 1184
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 100/200 (50%), Gaps = 27/200 (13%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKKLW +D K G G+L L ++ WR++ W +S H V+Q + + RRPG F
Sbjct: 141 AKKLWD----SDDLSKDGRKGML-LGEE-WRENAWGSSHHSVSQPIMV---QRRPGQGFH 191
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDVKKEKD 140
G + VLSPRS + GLGV MVEYVL +SP K +G ++D +K
Sbjct: 192 GNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDKMDGRYRNGGYGGGDADPDGREKGNA 250
Query: 141 KAPASPYDVKK----ELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPG 196
+ SP++ K ++ + S A + NG + NG+D + K ++ TPG
Sbjct: 251 QDQTSPFEEDKSPEMKVGEESDAAKANGR--GLLNGMDRDCK-----------DFNPTPG 297
Query: 197 SRQPSPTDDGSELAAVQAAV 216
SRQ SPT+ + QA +
Sbjct: 298 SRQASPTEAVERMGPGQAGL 317
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSK 287
SS H V+Q + + RRPG F G + VLSPRS + GLGV MVEYVL +SP K
Sbjct: 171 SSHHSVSQPIMV---QRRPGQGFHGNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDK 225
>gi|90991430|dbj|BAE93117.1| pumilio-2B [Oncorhynchus mykiss]
Length = 389
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 101/200 (50%), Gaps = 27/200 (13%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKKLW ++ +D K G+L L ++ WR++ W +S H V+Q + + RRPG F
Sbjct: 141 AKKLWDSDDLSKDGRK----GML-LGEE-WRENAWGSSHHSVSQPIMV---QRRPGQGFH 191
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDVKKEKD 140
G + VLSPRS + GLGV MVEYVL +SP K +G ++D +K
Sbjct: 192 GNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDKMDGRYRNGGYGGGDADPDGREKGNA 250
Query: 141 KAPASPYDVKK----ELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPG 196
+ SP++ K ++ + S A + NG + NG+D + K ++ TPG
Sbjct: 251 QDQTSPFEEDKSPEMKVGEESDAAKANGR--GLLNGMDRDCKD-----------FNPTPG 297
Query: 197 SRQPSPTDDGSELAAVQAAV 216
SRQ SPT+ + QA +
Sbjct: 298 SRQASPTEAVERMGPGQAGL 317
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSK 287
SS H V+Q + + RRPG F G + VLSPRS + GLGV MVEYVL +SP K
Sbjct: 171 SSHHSVSQPIMV---QRRPGQGFHGNGDANSVLSPRS-EGGGLGVSMVEYVLSSSPGDK 225
>gi|351699449|gb|EHB02368.1| Pumilio-like protein 2 [Heterocephalus glaber]
Length = 1059
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 91/190 (47%), Gaps = 33/190 (17%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +D K G G+ D+ WR++ W S H V+Q + + RR G F G
Sbjct: 22 KKFWD----PDDPTKDGEKGVFLGGDE-WRETAWGPSHHSVSQPIMV---QRRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL-----NSDGSDVK 136
+LSPRS +S GLGV MVEYVL +SP K L+ R R +DG +
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAEADGPERG 129
Query: 137 KEKDKAPASPYDVKKELVDAS-GAIQTNGM-VPVVQNGIDNEDKYKYSSGPGGVVCYSRT 194
+K KA D ++L G + NG +P NG+D + K ++RT
Sbjct: 130 DQKGKASPFEEDQDRDLKQGEDGDPKLNGRGLP---NGVDADGK-----------DFNRT 175
Query: 195 PGSRQPSPTD 204
PGSRQ SPT+
Sbjct: 176 PGSRQASPTE 185
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 230 SDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDN 289
S H V+Q + + RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 53 SHHSVSQPIMV---QRRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK-- 106
Query: 290 GLEPRMR 296
L+ R R
Sbjct: 107 -LDSRFR 112
>gi|327261367|ref|XP_003215502.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2-like [Anolis
carolinensis]
Length = 1180
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 95/197 (48%), Gaps = 37/197 (18%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKK W +D K G GI L D+ WR++ W T H ++Q + + R+P F
Sbjct: 143 AKKFWE----PDDPAKDGQKGIF-LGDE-WRETAWGTPHHSMSQPIMV---QRKP--VFH 191
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDV---KK 137
G VLSPRS +S GLGV MVEYVL +SP K L+ R R + ++ +K
Sbjct: 192 GNSEVNAVLSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGAFGTREAEADGPEK 247
Query: 138 EKDKAPASPYDVKKELVDASG----AIQTNGM-VPVVQNGIDNEDKYKYSSGPGGVVCYS 192
K ASP++ +K G + NG +P NG+D + K ++
Sbjct: 248 GDQKGKASPFEEEKNRDLKQGDDDDVTKINGRGLP---NGMDADCK-----------DFN 293
Query: 193 RTPGSRQPSPTDDGSEL 209
RTPGSRQ SPT+ L
Sbjct: 294 RTPGSRQASPTEVAERL 310
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
R+P F G VLSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 186 RKP--VFHGNSEVNAVLSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 231
>gi|449488821|ref|XP_004176337.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1, partial
[Taeniopygia guttata]
Length = 1076
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 53/91 (58%), Gaps = 10/91 (10%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L DQ WRDS W TSDH V+Q + + RRPG F
Sbjct: 150 KKFWE----SDDSSKDGPKGIF-LGDQ-WRDSAWGTSDHSVSQPIMV---QRRPGQGFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP 112
VLSPRS +S GLGV MVEYVL +SP
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSP 230
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP 284
+SDH V+Q + + RRPG F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPIMV---QRRPGQGFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSP 230
>gi|299883578|emb|CBD70070.1| pumilio-related protein [Pelophylax lessonae]
Length = 1204
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 99/218 (45%), Gaps = 55/218 (25%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS+K G GI L DQ WR+S W SDH V+Q + + RRPG F
Sbjct: 151 KKFWE----SDDSNKDGPKGIF-LGDQ-WRESAWGASDHSVSQPIMV---QRRPGQGFHV 201
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLE--------------------P 121
VLSPRS +S GLGV MVEYVL +SP DN + P
Sbjct: 202 GSEVNSVLSPRS-ESGGLGVSMVEYVLSSSP--GDNCMRKGGFVSASPLIQTRGGALRLP 258
Query: 122 RMRGLVLNSDGSDVKKEK-DKAPASPYDVKK--ELVDASGAIQTNGMVPVVQNGIDNEDK 178
R R + D + +K DK Y+ K +L + S + +P VQNGID
Sbjct: 259 RYRKMQGPRDPEGEENDKGDKKSKGVYEGDKLGDLKEESDNMDKANGLP-VQNGID---- 313
Query: 179 YKYSSGPGGVVCYSRTPGSRQPS--------PTDDGSE 208
G V +SRTPG+ Q S P+ +GSE
Sbjct: 314 -------GDVKDFSRTPGNCQNSANEVDLLGPSQNGSE 344
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 4/56 (7%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP 284
+SDH V+Q + + RRPG F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 180 ASDHSVSQPIMV---QRRPGQGFHVGSEVNSVLSPRS-ESGGLGVSMVEYVLSSSP 231
>gi|348513123|ref|XP_003444092.1| PREDICTED: pumilio homolog 1-like [Oreochromis niloticus]
Length = 1163
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 101/200 (50%), Gaps = 39/200 (19%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPG--A 77
+ KK W + DS K G GI DQ WRDS W SDH V+Q + + +RRPG
Sbjct: 122 TGKKFWETD----DSGKDGPKGIFL--DQ-WRDSAWGASDHSVSQPIMV---SRRPGQGF 171
Query: 78 TFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSK-DNGLEPRMRGLVLNSDGSDVK 136
G V+SPRS +S GLGV MVEYVL +SP K D+ L +G DG +V+
Sbjct: 172 HGGGEVGVGSVMSPRS-ESGGLGVSMVEYVLSSSPADKLDSCLR---KGPYGQRDG-EVE 226
Query: 137 KEKDKAPASPYDVK--KELVD-----ASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVV 189
+EK + P + ++ + KEL + S I NG+ VQNG+D + K
Sbjct: 227 EEKREKPKTTFEGEKLKELTEGESDVISDVINPNGL--PVQNGLDVDVKE---------- 274
Query: 190 CYSRTPGSRQPSPTDDGSEL 209
+ R PG+ P+P +G L
Sbjct: 275 -FGRPPGN-MPAPGPEGDLL 292
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Query: 229 SSDHGVTQGMAMVPSARRPG--ATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS 286
+SDH V+Q + + +RRPG G V+SPRS +S GLGV MVEYVL +SP
Sbjct: 152 ASDHSVSQPIMV---SRRPGQGFHGGGEVGVGSVMSPRS-ESGGLGVSMVEYVLSSSPAD 207
Query: 287 K 287
K
Sbjct: 208 K 208
>gi|440586621|emb|CCK33032.1| RNA-binding protein Pumilio [Platynereis dumerilii]
Length = 327
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 16/122 (13%)
Query: 12 DTKQTIAPSAKKLWGVEEGKEDSHKTGGGGILNLNDQMW--RDSTWST-------SDHGV 62
D+ + + KKLWG E+ K G + W RD TW +DH V
Sbjct: 93 DSTRELGSHTKKLWG-EDDKGGGDNPGAKASIFPGPNPWTTRDDTWGNGPSGQYNNDHAV 151
Query: 63 TQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPR 122
+Q ++M+ RRPG +FPG+D VLSPRSS++ LGV M EYVLG SP K+ +PR
Sbjct: 152 SQPISMM--HRRPG-SFPGSD-PTSVLSPRSSETGVLGVNMAEYVLGGSPVGKE--FDPR 205
Query: 123 MR 124
+R
Sbjct: 206 LR 207
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 6/68 (8%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
++DH V+Q ++M+ RRPG +FPG+D VLSPRSS++ LGV M EYVLG SP K+
Sbjct: 146 NNDHAVSQPISMM--HRRPG-SFPGSD-PTSVLSPRSSETGVLGVNMAEYVLGGSPVGKE 201
Query: 289 NGLEPRMR 296
+PR+R
Sbjct: 202 --FDPRLR 207
>gi|432883258|ref|XP_004074234.1| PREDICTED: pumilio homolog 1 [Oryzias latipes]
Length = 1166
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 93/182 (51%), Gaps = 31/182 (17%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPG--A 77
+ KK W + DS K G GI DQ WRDS W SDH V+Q + + +RRPG
Sbjct: 122 TGKKFWETD----DSGKDGPKGIFL--DQ-WRDSAWGASDHSVSQPIMV---SRRPGQGF 171
Query: 78 TFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSK-DNGLEPRMRGLVLNSDGSDVK 136
G V+SPRS +S GLGV MVEYVL +SP K D+ L +G DG +V+
Sbjct: 172 HGGGEVGVGSVMSPRS-ESGGLGVSMVEYVLSSSPADKLDSCLR---KGPYGQRDG-EVE 226
Query: 137 KEKDKAPASPYDVK-KELVD---------ASGAIQTNGMVPVVQNGIDNEDKYKYSSGPG 186
+EK + P S K KEL + S I NG+ VQNG+D + K ++ PG
Sbjct: 227 EEKREKPKSFEGEKLKELTEGEADVISDVISDVINPNGL--PVQNGLDVDVK-EFGRPPG 283
Query: 187 GV 188
+
Sbjct: 284 NM 285
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Query: 229 SSDHGVTQGMAMVPSARRPG--ATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS 286
+SDH V+Q + + +RRPG G V+SPRS +S GLGV MVEYVL +SP
Sbjct: 152 ASDHSVSQPIMV---SRRPGQGFHGGGEVGVGSVMSPRS-ESGGLGVSMVEYVLSSSPAD 207
Query: 287 K 287
K
Sbjct: 208 K 208
>gi|261872057|gb|ACY02862.1| pumilio 1, partial [Oryzias latipes]
Length = 1162
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/182 (39%), Positives = 93/182 (51%), Gaps = 31/182 (17%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPG--A 77
+ KK W + DS K G GI DQ WRDS W SDH V+Q + + +RRPG
Sbjct: 118 TGKKFWETD----DSGKDGPKGIFL--DQ-WRDSAWGASDHSVSQPIMV---SRRPGQGF 167
Query: 78 TFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSK-DNGLEPRMRGLVLNSDGSDVK 136
G V+SPRS +S GLGV MVEYVL +SP K D+ L +G DG +V+
Sbjct: 168 HGGGEVGVGSVMSPRS-ESGGLGVSMVEYVLSSSPADKLDSCLR---KGPYGQRDG-EVE 222
Query: 137 KEKDKAPASPYDVK-KELVD---------ASGAIQTNGMVPVVQNGIDNEDKYKYSSGPG 186
+EK + P S K KEL + S I NG+ VQNG+D + K ++ PG
Sbjct: 223 EEKREKPKSFEGEKLKELTEGEADVISDVISDVINPNGL--PVQNGLDVDVK-EFGRPPG 279
Query: 187 GV 188
+
Sbjct: 280 NM 281
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 37/61 (60%), Gaps = 6/61 (9%)
Query: 229 SSDHGVTQGMAMVPSARRPG--ATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS 286
+SDH V+Q + + +RRPG G V+SPRS +S GLGV MVEYVL +SP
Sbjct: 148 ASDHSVSQPIMV---SRRPGQGFHGGGEVGVGSVMSPRS-ESGGLGVSMVEYVLSSSPAD 203
Query: 287 K 287
K
Sbjct: 204 K 204
>gi|443699257|gb|ELT98838.1| hypothetical protein CAPTEDRAFT_210884 [Capitella teleta]
Length = 340
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 51 RDSTWSTSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGT 110
R+ +W + GVT + +V RRPG +FPG+ + A VLSPRSS++S LGV M EYVLG
Sbjct: 220 REDSWGANPSGVTNPIQLV--QRRPG-SFPGSGDAASVLSPRSSETSALGVNMAEYVLGG 276
Query: 111 SPTSKD 116
SP KD
Sbjct: 277 SPVGKD 282
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Query: 233 GVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
GVT + +V RRPG +FPG+ + A VLSPRSS++S LGV M EYVLG SP KD
Sbjct: 230 GVTNPIQLV--QRRPG-SFPGSGDAASVLSPRSSETSALGVNMAEYVLGGSPVGKD 282
>gi|156389179|ref|XP_001634869.1| predicted protein [Nematostella vectensis]
gi|156221957|gb|EDO42806.1| predicted protein [Nematostella vectensis]
Length = 343
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 18/122 (14%)
Query: 3 YTKFVVGNDDTK-----QTIAPSAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTW-- 55
+ + N++ K + IA +AKKLW ++ E+ G IL + DQ WRD+ W
Sbjct: 155 FQNLALNNNEKKADTPIEEIASTAKKLWEAQDSGEEKQGVTSG-IL-MGDQ-WRDNAWGP 211
Query: 56 -----STSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGT 110
+ S+H V+Q + MV +PGA + GVLSPRS+D G+G+ MVEYVL +
Sbjct: 212 SVPHVTQSEHAVSQPI-MVQRPVKPGAYNGNNSDSHGVLSPRSTD--GVGLSMVEYVLRS 268
Query: 111 SP 112
SP
Sbjct: 269 SP 270
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 230 SDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSP 284
S+H V+Q + MV +PGA + GVLSPRS+D G+G+ MVEYVL +SP
Sbjct: 219 SEHAVSQPI-MVQRPVKPGAYNGNNSDSHGVLSPRSTD--GVGLSMVEYVLRSSP 270
>gi|269784977|ref|NP_001161640.1| pumilio-like protein [Saccoglossus kowalevskii]
gi|268054285|gb|ACY92629.1| pumilio-like protein [Saccoglossus kowalevskii]
Length = 419
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 61/112 (54%), Gaps = 18/112 (16%)
Query: 17 IAPSAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTW-----STSDHGVTQGMAMVPS 71
I P+ KK W + EG E G + L DQ W+ + W + +DH V+Q + M
Sbjct: 120 IVPTTKKFWEMGEGDERKGDEPKG--IFLGDQ-WQGTAWGAVPLTNADHSVSQPIIM--- 173
Query: 72 ARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRM 123
+R G + G N VLSPRS +S GLGV MVEYVLG+SP K LE RM
Sbjct: 174 -QRRG--YHGDANA--VLSPRS-ESGGLGVSMVEYVLGSSPQGKAE-LESRM 218
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 10/67 (14%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
++DH V+Q + M +R G + G N VLSPRS +S GLGV MVEYVLG+SP K
Sbjct: 162 NADHSVSQPIIM----QRRG--YHGDANA--VLSPRS-ESGGLGVSMVEYVLGSSPQGKA 212
Query: 289 NGLEPRM 295
LE RM
Sbjct: 213 E-LESRM 218
>gi|449681928|ref|XP_002162083.2| PREDICTED: uncharacterized protein LOC100200828, partial [Hydra
magnipapillata]
Length = 940
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 50 WRDSTWSTSD-------HGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVK 102
W D +WS +D H ++Q + MV +R + + + V SPRS+D S LGV
Sbjct: 102 WHDPSWSINDVNSDKSEHAISQPITMV---QRRHEQYGVSQHV--VTSPRSADGSVLGVH 156
Query: 103 MVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDVKKEKDKAPASPYDVKKEL 153
MVEYVL +SP D LE RM+ + + SDG + K + +D +E+
Sbjct: 157 MVEYVLASSPGGHD--LESRMKEMNIISDGVNQKMHNGNTISQTFDEDEEV 205
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 7/72 (9%)
Query: 227 SDSSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS 286
SD S+H ++Q + MV +R + + + V SPRS+D S LGV MVEYVL +SP
Sbjct: 114 SDKSEHAISQPITMV---QRRHEQYGVSQHV--VTSPRSADGSVLGVHMVEYVLASSPGG 168
Query: 287 KDNGLEPRMRGL 298
D LE RM+ +
Sbjct: 169 HD--LESRMKEM 178
>gi|409194216|gb|AFV31434.1| pumilio [Hydractinia echinata]
Length = 979
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 20/132 (15%)
Query: 50 WRDSTWST--------SDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGV 101
W++S+WS S+H ++Q + MV RRP P V SPRS+D S LGV
Sbjct: 124 WQESSWSMGADGSNDKSEHAISQPITMV--QRRPEQYGPPQQ----VTSPRSADGSVLGV 177
Query: 102 KMVEYVLGTSPTSKDNGLEPRMRGLVLNSD----GSDVKKEKDKAPASPYDVKKELVDAS 157
MVEYVL +SP + +E M+G+ +N + + + A SP++ + E+ + S
Sbjct: 178 HMVEYVLASSPGGHE--IENHMKGMNINGNLEVSNTQLPNGNVVARKSPFEEEDEIENNS 235
Query: 158 GAIQTNGMVPVV 169
Q P +
Sbjct: 236 QHSQNESEEPTL 247
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Query: 227 SDSSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS 286
+D S+H ++Q + MV RRP P V SPRS+D S LGV MVEYVL +SP
Sbjct: 137 NDKSEHAISQPITMV--QRRPEQYGPPQQ----VTSPRSADGSVLGVHMVEYVLASSPGG 190
Query: 287 KDNGLEPRMRGL 298
+ +E M+G+
Sbjct: 191 HE--IENHMKGM 200
>gi|390336472|ref|XP_794621.3| PREDICTED: pumilio homolog 1 [Strongylocentrotus purpuratus]
Length = 1183
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 85/174 (48%), Gaps = 37/174 (21%)
Query: 58 SDHGVTQGMAMVPSARR--PGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSK 115
S+H V+Q + MV R+ PG GT V+SPRS D+SGLG+ M EYVL +SP K
Sbjct: 142 SNHSVSQPI-MVQRGRQLSPGT---GTFQENAVMSPRS-DTSGLGLSMAEYVLASSPQGK 196
Query: 116 D-NGLEPRMR-----------GLVLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTN 163
+ +G R++ ++ S +K K P SP+ +A G Q
Sbjct: 197 EIDGKHHRLKPGFDGGGVQHQQGGDSNQQSQGNGKKSKTP-SPF-------EAEGDKQE- 247
Query: 164 GMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGSRQPSPT--DDGSELAAVQAA 215
VV+NGID + K P +SRTPGSR SPT +DG +A Q A
Sbjct: 248 ----VVENGIDPVPQQKPEEDPN---TFSRTPGSRNASPTEPEDGKNVAMQQPA 294
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 7/61 (11%)
Query: 230 SDHGVTQGMAMVPSARR--PGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSK 287
S+H V+Q + MV R+ PG GT V+SPRS D+SGLG+ M EYVL +SP K
Sbjct: 142 SNHSVSQPI-MVQRGRQLSPGT---GTFQENAVMSPRS-DTSGLGLSMAEYVLASSPQGK 196
Query: 288 D 288
+
Sbjct: 197 E 197
>gi|410955768|ref|XP_003984522.1| PREDICTED: pumilio homolog 2 isoform 3 [Felis catus]
Length = 1007
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 73 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL---- 128
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRD 64
Query: 129 -NSDGSDVKKEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSG 184
+DG + +K KA D ++L D I G+ NG+D + K
Sbjct: 65 AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK------ 114
Query: 185 PGGVVCYSRTPGSRQPSPTD 204
++RTPGSRQ SPT+
Sbjct: 115 -----DFNRTPGSRQASPTE 129
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 56
>gi|426223188|ref|XP_004005759.1| PREDICTED: pumilio homolog 2 isoform 2 [Ovis aries]
Length = 1007
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 73 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL---- 128
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRD 64
Query: 129 -NSDGSDVKKEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSG 184
+DG + +K KA D ++L D I G+ NG+D + K
Sbjct: 65 AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK------ 114
Query: 185 PGGVVCYSRTPGSRQPSPTD 204
++RTPGSRQ SPT+
Sbjct: 115 -----DFNRTPGSRQASPTE 129
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 56
>gi|358414521|ref|XP_003582858.1| PREDICTED: pumilio homolog 2 [Bos taurus]
gi|359070244|ref|XP_002691562.2| PREDICTED: pumilio homolog 2 isoform 1 [Bos taurus]
Length = 1007
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 73 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL---- 128
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRD 64
Query: 129 -NSDGSDVKKEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSG 184
+DG + +K KA D ++L D I G+ NG+D + K
Sbjct: 65 AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK------ 114
Query: 185 PGGVVCYSRTPGSRQPSPTD 204
++RTPGSRQ SPT+
Sbjct: 115 -----DFNRTPGSRQASPTE 129
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 56
>gi|350582684|ref|XP_003481332.1| PREDICTED: pumilio homolog 2 [Sus scrofa]
Length = 1004
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 73 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL---- 128
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRD 64
Query: 129 -NSDGSDVKKEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSG 184
+DG + +K KA D ++L D I G+ NG+D + K
Sbjct: 65 AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK------ 114
Query: 185 PGGVVCYSRTPGSRQPSPTD 204
++RTPGSRQ SPT+
Sbjct: 115 -----DFNRTPGSRQASPTE 129
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 56
>gi|291387144|ref|XP_002710096.1| PREDICTED: pumilio homolog 2-like isoform 3 [Oryctolagus cuniculus]
Length = 1009
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 73 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL---- 128
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRD 64
Query: 129 -NSDGSDVKKEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSG 184
+DG + +K KA D ++L D I G+ NG+D + K
Sbjct: 65 AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK------ 114
Query: 185 PGGVVCYSRTPGSRQPSPTD 204
++RTPGSRQ SPT+
Sbjct: 115 -----DFNRTPGSRQASPTE 129
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 56
>gi|297668111|ref|XP_002812298.1| PREDICTED: pumilio homolog 2 isoform 3 [Pongo abelii]
Length = 1009
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 73 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL---- 128
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRD 64
Query: 129 -NSDGSDVKKEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSG 184
+DG + +K KA D ++L D I G+ NG+D + K
Sbjct: 65 AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK------ 114
Query: 185 PGGVVCYSRTPGSRQPSPTD 204
++RTPGSRQ SPT+
Sbjct: 115 -----DFNRTPGSRQASPTE 129
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 56
>gi|332253819|ref|XP_003276029.1| PREDICTED: pumilio homolog 2 isoform 2 [Nomascus leucogenys]
Length = 1009
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 73 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL---- 128
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRD 64
Query: 129 -NSDGSDVKKEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSG 184
+DG + +K KA D ++L D I G+ NG+D + K
Sbjct: 65 AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK------ 114
Query: 185 PGGVVCYSRTPGSRQPSPTD 204
++RTPGSRQ SPT+
Sbjct: 115 -----DFNRTPGSRQASPTE 129
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 56
>gi|403288169|ref|XP_003935285.1| PREDICTED: pumilio homolog 2 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1010
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 73 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL---- 128
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRD 64
Query: 129 -NSDGSDVKKEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSG 184
+DG + +K KA D ++L D I G+ NG+D + K
Sbjct: 65 AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK------ 114
Query: 185 PGGVVCYSRTPGSRQPSPTD 204
++RTPGSRQ SPT+
Sbjct: 115 -----DFNRTPGSRQASPTE 129
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 56
>gi|194385402|dbj|BAG65078.1| unnamed protein product [Homo sapiens]
Length = 1008
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 73 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL---- 128
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRD 64
Query: 129 -NSDGSDVKKEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSG 184
+DG + +K KA D ++L D I G+ NG+D + K
Sbjct: 65 AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK------ 114
Query: 185 PGGVVCYSRTPGSRQPSPTD 204
++RTPGSRQ SPT+
Sbjct: 115 -----DFNRTPGSRQASPTE 129
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 56
>gi|332812701|ref|XP_003308953.1| PREDICTED: pumilio homolog 2 [Pan troglodytes]
gi|397513517|ref|XP_003827059.1| PREDICTED: pumilio homolog 2 isoform 2 [Pan paniscus]
gi|426334845|ref|XP_004028947.1| PREDICTED: pumilio homolog 2 isoform 3 [Gorilla gorilla gorilla]
Length = 1009
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 66/140 (47%), Gaps = 27/140 (19%)
Query: 73 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL---- 128
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRD 64
Query: 129 -NSDGSDVKKEKDKAPASPYDVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSG 184
+DG + +K KA D ++L D I G+ NG+D + K
Sbjct: 65 AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGL----PNGMDADCK------ 114
Query: 185 PGGVVCYSRTPGSRQPSPTD 204
++RTPGSRQ SPT+
Sbjct: 115 -----DFNRTPGSRQASPTE 129
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR 296
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFR 56
>gi|384248244|gb|EIE21728.1| hypothetical protein COCSUDRAFT_47922 [Coccomyxa subellipsoidea
C-169]
Length = 1167
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 18/109 (16%)
Query: 166 VPVVQNGIDNEDKYKYSSG--PGGVVCYSRTPGSRQPSPTDDGSELAAVQAAVHHSHQKP 223
V V +GID + ++++ G V C + G+R DDG + A SH +
Sbjct: 852 VTVHGSGIDVDPLWRHAGGVEEWQVAC---SCGTRD----DDGERMIACDGCCEWSHTRC 904
Query: 224 ARFSD---SSDHGVTQGMAMVPSARRPGAT------FPGTDNGAGVLSP 263
A F+D S DH + A +P +RP A F GTD GV P
Sbjct: 905 AGFADALPSPDHFLCPRCARLPPGQRPAALESAPAGFNGTDGATGVEGP 953
>gi|170061727|ref|XP_001866362.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167879859|gb|EDS43242.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 254
Score = 37.0 bits (84), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 29/88 (32%)
Query: 138 EKDKAPASPYD---VKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRT 194
+KDKA SP++ +KKE V++ TNG+V V NGID++ + +RT
Sbjct: 16 DKDKA-NSPFESNGLKKEEVNS-----TNGVVIV--NGIDDDKGF------------NRT 55
Query: 195 PGSRQPSPTDD----GSELAAVQAAVHH 218
PGSRQPSP ++ GS L + A HH
Sbjct: 56 PGSRQPSPAEEQMPRGSTL--LDAPSHH 81
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.308 0.129 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,644,861,750
Number of Sequences: 23463169
Number of extensions: 275741904
Number of successful extensions: 492399
Number of sequences better than 100.0: 266
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 240
Number of HSP's that attempted gapping in prelim test: 491277
Number of HSP's gapped (non-prelim): 639
length of query: 301
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 160
effective length of database: 9,050,888,538
effective search space: 1448142166080
effective search space used: 1448142166080
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 76 (33.9 bits)