Your job contains 1 sequence.
>psy7646
QDYTKFVVGNDDTKQTIAPSAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDH
GVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLE
PRMRGLVLNSDGSDVKKEKDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYK
YSSGPGGVVCYSRTPGSRQPSPTDDGSELAAVQAAVHHSHQKPARFSDSSDHGVTQGMAM
VPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVL
E
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7646
(301 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F6XHY4 - symbol:PUM1 "Uncharacterized protein" ... 237 1.4e-18 1
UNIPROTKB|E2QVA9 - symbol:PUM1 "Uncharacterized protein" ... 237 1.5e-18 1
UNIPROTKB|H0YEH2 - symbol:PUM1 "Pumilio homolog 1" specie... 236 1.7e-18 1
UNIPROTKB|E1BE82 - symbol:PUM1 "Uncharacterized protein" ... 236 1.9e-18 1
UNIPROTKB|Q14671 - symbol:PUM1 "Pumilio homolog 1" specie... 236 1.9e-18 1
UNIPROTKB|E9PCJ0 - symbol:PUM1 "Pumilio homolog 1" specie... 236 1.9e-18 1
UNIPROTKB|Q5T1Z4 - symbol:PUM1 "Pumilio homolog 1" specie... 236 1.9e-18 1
MGI|MGI:1931749 - symbol:Pum1 "pumilio 1 (Drosophila)" sp... 236 1.9e-18 1
UNIPROTKB|Q5T1Z8 - symbol:PUM1 "Pumilio homolog 1 (Drosop... 236 2.0e-18 1
ZFIN|ZDB-GENE-030131-2074 - symbol:pum1 "pumilio homolog ... 234 3.0e-18 1
UNIPROTKB|F1NV23 - symbol:PUM2 "Uncharacterized protein" ... 222 4.0e-18 2
UNIPROTKB|E1BWC0 - symbol:PUM2 "Uncharacterized protein" ... 222 4.0e-18 2
UNIPROTKB|Q2VB19 - symbol:PUM1 "Pumilio homolog 1" specie... 232 5.0e-18 1
MGI|MGI:1931751 - symbol:Pum2 "pumilio 2 (Drosophila)" sp... 225 2.4e-17 1
UNIPROTKB|C9JW01 - symbol:PUM2 "Pumilio homolog 2" specie... 211 3.2e-17 1
UNIPROTKB|E2RT57 - symbol:PUM2 "Uncharacterized protein" ... 218 1.3e-16 1
UNIPROTKB|F1SCU6 - symbol:PUM2 "Uncharacterized protein" ... 218 1.3e-16 1
UNIPROTKB|F1N2B8 - symbol:PUM2 "Uncharacterized protein" ... 218 1.4e-16 1
UNIPROTKB|Q8TB72 - symbol:PUM2 "Pumilio homolog 2" specie... 211 1.5e-15 1
ZFIN|ZDB-GENE-081031-76 - symbol:pum2 "pumilio homolog 2 ... 206 2.7e-14 1
UNIPROTKB|B4E2B6 - symbol:PUM2 "Pumilio homolog 2" specie... 148 3.3e-07 1
FB|FBgn0003165 - symbol:pum "pumilio" species:7227 "Droso... 143 2.0e-06 1
>UNIPROTKB|F6XHY4 [details] [associations]
symbol:PUM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003723 GeneTree:ENSGT00390000017241
OMA:RHVVGVK Ensembl:ENSCAFT00000017823 EMBL:AAEX03001673
Uniprot:F6XHY4
Length = 1162
Score = 237 (88.5 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 78/191 (40%), Positives = 99/191 (51%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D K GI L DQ WRDS W TSDH V+Q + MV RRPG +F
Sbjct: 150 KKFWETDESSKDGPK----GIF-LGDQ-WRDSAWGTSDHSVSQPI-MVQ--RRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS---KDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D +
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGDK 255
Query: 139 KDKAPASPYDVKKELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGS 197
K+K A D +L + + +TNG+ PV QNGID + K +S PG C +
Sbjct: 256 KNKG-AFDGDKLGDLKEEGDVMDKTNGL-PV-QNGIDADVK-DFSRTPGN--CQNSANEV 309
Query: 198 RQPSPTDDGSE 208
P +GSE
Sbjct: 310 DLLGPNQNGSE 320
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 34/69 (49%), Positives = 41/69 (59%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS-- 286
+SDH V+Q + MV RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPI-MVQ--RRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 287 -KDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>UNIPROTKB|E2QVA9 [details] [associations]
symbol:PUM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003723 CTD:9698 RefSeq:XP_852168.1
Ensembl:ENSCAFT00000017823 GeneID:478158 KEGG:cfa:478158
NextBio:20853526 Uniprot:E2QVA9
Length = 1224
Score = 237 (88.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 78/191 (40%), Positives = 99/191 (51%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D K GI L DQ WRDS W TSDH V+Q + MV RRPG +F
Sbjct: 186 KKFWETDESSKDGPK----GIF-LGDQ-WRDSAWGTSDHSVSQPI-MVQ--RRPGQSFHV 236
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS---KDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D +
Sbjct: 237 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGDK 291
Query: 139 KDKAPASPYDVKKELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGS 197
K+K A D +L + + +TNG+ PV QNGID + K +S PG C +
Sbjct: 292 KNKG-AFDGDKLGDLKEEGDVMDKTNGL-PV-QNGIDADVK-DFSRTPGN--CQNSANEV 345
Query: 198 RQPSPTDDGSE 208
P +GSE
Sbjct: 346 DLLGPNQNGSE 356
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 34/69 (49%), Positives = 41/69 (59%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS-- 286
+SDH V+Q + MV RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 215 TSDHSVSQPI-MVQ--RRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 270
Query: 287 -KDNGLEPR 294
+ G PR
Sbjct: 271 LRKGGFGPR 279
>UNIPROTKB|H0YEH2 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 EMBL:AL356320 EMBL:AL445235 HGNC:HGNC:14957
ChiTaRS:PUM1 Ensembl:ENST00000525843 Uniprot:H0YEH2
Length = 1125
Score = 236 (88.1 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 77/191 (40%), Positives = 99/191 (51%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D K GI L DQ WRDS W TSDH V+Q + MV RRPG +F
Sbjct: 167 KKFWETDESSKDGPK----GIF-LGDQ-WRDSAWGTSDHSVSQPI-MVQ--RRPGQSFHV 217
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS---KDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 218 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 272
Query: 139 KDKAPASPYDVKKELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGS 197
K+K D +L + + +TNG+ PV QNGID + K +S PG C +
Sbjct: 273 KNKGTFDG-DKLGDLKEEGDVMDKTNGL-PV-QNGIDADVK-DFSRTPGN--CQNSANEV 326
Query: 198 RQPSPTDDGSE 208
P +GSE
Sbjct: 327 DLLGPNQNGSE 337
Score = 123 (48.4 bits), Expect = 0.00024, P = 0.00024
Identities = 34/69 (49%), Positives = 41/69 (59%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS-- 286
+SDH V+Q + MV RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 196 TSDHSVSQPI-MVQ--RRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 251
Query: 287 -KDNGLEPR 294
+ G PR
Sbjct: 252 LRKGGFGPR 260
>UNIPROTKB|E1BE82 [details] [associations]
symbol:PUM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 GeneTree:ENSGT00390000017241 CTD:9698 OMA:RHVVGVK
EMBL:DAAA02006263 EMBL:DAAA02006264 EMBL:DAAA02006265
IPI:IPI00713931 RefSeq:NP_001180052.1 UniGene:Bt.44441
Ensembl:ENSBTAT00000025262 GeneID:535450 KEGG:bta:535450
NextBio:20876753 Uniprot:E1BE82
Length = 1186
Score = 236 (88.1 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 77/191 (40%), Positives = 99/191 (51%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D K GI L DQ WRDS W TSDH V+Q + MV RRPG +F
Sbjct: 150 KKFWETDESSKDGPK----GIF-LGDQ-WRDSAWGTSDHSVSQPI-MVQ--RRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS---KDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPASPYDVKKELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGS 197
K+K D +L + + +TNG+ PV QNGID + K +S PG C +
Sbjct: 256 KNKGTFDG-DKLGDLKEEGDVMDKTNGL-PV-QNGIDADVK-DFSRTPGN--CQNSANEV 309
Query: 198 RQPSPTDDGSE 208
P +GSE
Sbjct: 310 DLLGPNQNGSE 320
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 34/69 (49%), Positives = 41/69 (59%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS-- 286
+SDH V+Q + MV RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPI-MVQ--RRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 287 -KDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>UNIPROTKB|Q14671 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006892 "post-Golgi vesicle-mediated transport" evidence=TAS]
[GO:0016044 "cellular membrane organization" evidence=TAS]
Reactome:REACT_11123 InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0005829 GO:GO:0006417 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:CH471059 GO:GO:0003723 GO:GO:0016044
GO:GO:0006892 eggNOG:COG5099 CTD:9698 HOGENOM:HOG000238461
HOVERGEN:HBG049462 OrthoDB:EOG4P8FHP EMBL:AF315592 EMBL:D43951
EMBL:AL356320 EMBL:AL445235 EMBL:AK291779 EMBL:BC013398
IPI:IPI00551014 IPI:IPI00941189 RefSeq:NP_001018494.1
RefSeq:NP_055491.1 UniGene:Hs.281707 PDB:1IB2 PDB:1M8W PDB:1M8X
PDB:1M8Y PDB:1M8Z PDB:2YJY PDB:3BSB PDB:3BSX PDB:3Q0L PDB:3Q0M
PDB:3Q0N PDB:3Q0O PDB:3Q0P PDBsum:1IB2 PDBsum:1M8W PDBsum:1M8X
PDBsum:1M8Y PDBsum:1M8Z PDBsum:2YJY PDBsum:3BSB PDBsum:3BSX
PDBsum:3Q0L PDBsum:3Q0M PDBsum:3Q0N PDBsum:3Q0O PDBsum:3Q0P
ProteinModelPortal:Q14671 SMR:Q14671 DIP:DIP-29082N IntAct:Q14671
MINT:MINT-1199500 STRING:Q14671 PhosphoSite:Q14671 DMDM:41688619
UCD-2DPAGE:Q14671 PaxDb:Q14671 PRIDE:Q14671 DNASU:9698
Ensembl:ENST00000257075 Ensembl:ENST00000440538 GeneID:9698
KEGG:hsa:9698 UCSC:uc001bsi.1 UCSC:uc001bsj.1 GeneCards:GC01M031405
HGNC:HGNC:14957 HPA:HPA027424 MIM:607204 neXtProt:NX_Q14671
PharmGKB:PA34042 PhylomeDB:Q14671 ChiTaRS:PUM1
EvolutionaryTrace:Q14671 GenomeRNAi:9698 NextBio:36439
ArrayExpress:Q14671 Bgee:Q14671 CleanEx:HS_PUM1
Genevestigator:Q14671 GermOnline:ENSG00000134644 Uniprot:Q14671
Length = 1186
Score = 236 (88.1 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 77/191 (40%), Positives = 99/191 (51%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D K GI L DQ WRDS W TSDH V+Q + MV RRPG +F
Sbjct: 150 KKFWETDESSKDGPK----GIF-LGDQ-WRDSAWGTSDHSVSQPI-MVQ--RRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS---KDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPASPYDVKKELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGS 197
K+K D +L + + +TNG+ PV QNGID + K +S PG C +
Sbjct: 256 KNKGTFDG-DKLGDLKEEGDVMDKTNGL-PV-QNGIDADVK-DFSRTPGN--CQNSANEV 309
Query: 198 RQPSPTDDGSE 208
P +GSE
Sbjct: 310 DLLGPNQNGSE 320
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 34/69 (49%), Positives = 41/69 (59%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS-- 286
+SDH V+Q + MV RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPI-MVQ--RRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 287 -KDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>UNIPROTKB|E9PCJ0 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 CTD:9698 EMBL:AL356320 EMBL:AL445235
RefSeq:NP_001018494.1 UniGene:Hs.281707 DNASU:9698 GeneID:9698
KEGG:hsa:9698 HGNC:HGNC:14957 ChiTaRS:PUM1 GenomeRNAi:9698
NextBio:36439 IPI:IPI00941275 ProteinModelPortal:E9PCJ0 SMR:E9PCJ0
Ensembl:ENST00000426105 UCSC:uc001bsh.1 ArrayExpress:E9PCJ0
Bgee:E9PCJ0 Uniprot:E9PCJ0
Length = 1188
Score = 236 (88.1 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 77/191 (40%), Positives = 99/191 (51%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D K GI L DQ WRDS W TSDH V+Q + MV RRPG +F
Sbjct: 150 KKFWETDESSKDGPK----GIF-LGDQ-WRDSAWGTSDHSVSQPI-MVQ--RRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS---KDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPASPYDVKKELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGS 197
K+K D +L + + +TNG+ PV QNGID + K +S PG C +
Sbjct: 256 KNKGTFDG-DKLGDLKEEGDVMDKTNGL-PV-QNGIDADVK-DFSRTPGN--CQNSANEV 309
Query: 198 RQPSPTDDGSE 208
P +GSE
Sbjct: 310 DLLGPNQNGSE 320
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 34/69 (49%), Positives = 41/69 (59%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS-- 286
+SDH V+Q + MV RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPI-MVQ--RRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 287 -KDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>UNIPROTKB|Q5T1Z4 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CH471059 GO:GO:0003723 HOGENOM:HOG000238461 HOVERGEN:HBG049462
OrthoDB:EOG4P8FHP EMBL:AL356320 EMBL:AL445235 UniGene:Hs.281707
HGNC:HGNC:14957 ChiTaRS:PUM1 IPI:IPI00646054 SMR:Q5T1Z4
STRING:Q5T1Z4 Ensembl:ENST00000373747 UCSC:uc001bsf.1
Uniprot:Q5T1Z4
Length = 1189
Score = 236 (88.1 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 77/191 (40%), Positives = 99/191 (51%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D K GI L DQ WRDS W TSDH V+Q + MV RRPG +F
Sbjct: 150 KKFWETDESSKDGPK----GIF-LGDQ-WRDSAWGTSDHSVSQPI-MVQ--RRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS---KDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPASPYDVKKELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGS 197
K+K D +L + + +TNG+ PV QNGID + K +S PG C +
Sbjct: 256 KNKGTFDG-DKLGDLKEEGDVMDKTNGL-PV-QNGIDADVK-DFSRTPGN--CQNSANEV 309
Query: 198 RQPSPTDDGSE 208
P +GSE
Sbjct: 310 DLLGPNQNGSE 320
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 34/69 (49%), Positives = 41/69 (59%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS-- 286
+SDH V+Q + MV RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPI-MVQ--RRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 287 -KDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>MGI|MGI:1931749 [details] [associations]
symbol:Pum1 "pumilio 1 (Drosophila)" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 MGI:MGI:1931749
GO:GO:0005737 GO:GO:0006417 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0003723 eggNOG:COG5099
GeneTree:ENSGT00390000017241 CTD:9698 HOGENOM:HOG000238461
HOVERGEN:HBG049462 OMA:RHVVGVK OrthoDB:EOG4P8FHP ChiTaRS:PUM1
EMBL:AF321909 EMBL:AK122205 EMBL:AK052145 EMBL:BC048174
EMBL:BC050747 IPI:IPI00330262 IPI:IPI00400349 IPI:IPI00400350
IPI:IPI00400351 RefSeq:NP_001153075.1 RefSeq:NP_001153076.1
RefSeq:NP_001153077.1 RefSeq:NP_001153078.1 RefSeq:NP_109647.2
UniGene:Mm.440206 ProteinModelPortal:Q80U78 SMR:Q80U78
IntAct:Q80U78 STRING:Q80U78 PhosphoSite:Q80U78 PaxDb:Q80U78
PRIDE:Q80U78 Ensembl:ENSMUST00000030315 Ensembl:ENSMUST00000097862
Ensembl:ENSMUST00000097864 GeneID:80912 KEGG:mmu:80912
UCSC:uc008uzl.2 InParanoid:Q80U78 NextBio:350286 Bgee:Q80U78
CleanEx:MM_PUM1 Genevestigator:Q80U78 Uniprot:Q80U78
Length = 1189
Score = 236 (88.1 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 77/191 (40%), Positives = 99/191 (51%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D K GI L DQ WRDS W TSDH V+Q + MV RRPG +F
Sbjct: 150 KKFWETDESSKDGPK----GIF-LGDQ-WRDSAWGTSDHSVSQPI-MVQ--RRPGQSFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS---KDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 255
Query: 139 KDKAPASPYDVKKELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGS 197
K+K D +L + + +TNG+ PV QNGID + K +S PG C +
Sbjct: 256 KNKGTFDG-DKLGDLKEEGDVMDKTNGL-PV-QNGIDADVK-DFSRTPGN--CQNSANEV 309
Query: 198 RQPSPTDDGSE 208
P +GSE
Sbjct: 310 DLLGPNQNGSE 320
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 34/69 (49%), Positives = 41/69 (59%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS-- 286
+SDH V+Q + MV RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPI-MVQ--RRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 287 -KDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>UNIPROTKB|Q5T1Z8 [details] [associations]
symbol:PUM1 "Pumilio homolog 1 (Drosophila), isoform CRA_c"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:CH471059 GO:GO:0003723 HOGENOM:HOG000238461
HOVERGEN:HBG049462 OMA:RHVVGVK EMBL:AL356320 EMBL:AL445235
UniGene:Hs.281707 HGNC:HGNC:14957 ChiTaRS:PUM1 IPI:IPI00032355
SMR:Q5T1Z8 STRING:Q5T1Z8 Ensembl:ENST00000373741 UCSC:uc001bsk.1
Uniprot:Q5T1Z8
Length = 1224
Score = 236 (88.1 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 77/191 (40%), Positives = 99/191 (51%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +E +D K GI L DQ WRDS W TSDH V+Q + MV RRPG +F
Sbjct: 186 KKFWETDESSKDGPK----GIF-LGDQ-WRDSAWGTSDHSVSQPI-MVQ--RRPGQSFHV 236
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS---KDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR +SD +D ++
Sbjct: 237 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDA----DSDENDKGEK 291
Query: 139 KDKAPASPYDVKKELVDASGAI-QTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGS 197
K+K D +L + + +TNG+ PV QNGID + K +S PG C +
Sbjct: 292 KNKGTFDG-DKLGDLKEEGDVMDKTNGL-PV-QNGIDADVK-DFSRTPGN--CQNSANEV 345
Query: 198 RQPSPTDDGSE 208
P +GSE
Sbjct: 346 DLLGPNQNGSE 356
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 34/69 (49%), Positives = 41/69 (59%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS-- 286
+SDH V+Q + MV RRPG +F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 215 TSDHSVSQPI-MVQ--RRPGQSFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 270
Query: 287 -KDNGLEPR 294
+ G PR
Sbjct: 271 LRKGGFGPR 279
>ZFIN|ZDB-GENE-030131-2074 [details] [associations]
symbol:pum1 "pumilio homolog 1 (Drosophila)"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 ZFIN:ZDB-GENE-030131-2074 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
GeneTree:ENSGT00390000017241 EMBL:CABZ01057427 EMBL:CABZ01093012
EMBL:CU207343 IPI:IPI00995409 Ensembl:ENSDART00000122308
ArrayExpress:E7FFV0 Bgee:E7FFV0 Uniprot:E7FFV0
Length = 1154
Score = 234 (87.4 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 69/169 (40%), Positives = 89/169 (52%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATF 79
+ KK W + DS K G GI DQ WRDS W SDH V+Q + MV RRPG F
Sbjct: 128 TGKKFWETD----DSGKDGPKGIFL--DQ-WRDSAWGASDHSVSQPI-MVQ--RRPGQGF 177
Query: 80 PGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSK-DNGLEPRMRGLVLNSDGSDVKKE 138
G VLSPRS +S GLGV MVEYVL +SP K D+ L G +S+ D +K
Sbjct: 178 HGVGEAGSVLSPRS-ESGGLGVSMVEYVLSSSPAEKMDSCLRKGAYG-PRDSEADDPEKR 235
Query: 139 KDKAPASPYDV-KKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPG 186
++ P + +D +KEL + + N QNG+D + K +S PG
Sbjct: 236 VEQKPKTTFDPERKELKETEPDVLDNPNGLPNQNGLDVDVK-DFSRTPG 283
Score = 215 (80.7 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 74/192 (38%), Positives = 95/192 (49%)
Query: 47 DQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEY 106
DQ WRDS W SDH V+Q + MV RRPG F G VLSPRS +S GLGV MVEY
Sbjct: 149 DQ-WRDSAWGASDHSVSQPI-MVQ--RRPGQGFHGVGEAGSVLSPRS-ESGGLGVSMVEY 203
Query: 107 VLGTSPTSK-DNGLEPRMRGLVLNSDGSDVKKEKDKAPASPYDV-KKELVDASGAIQTNG 164
VL +SP K D+ L G +S+ D +K ++ P + +D +KEL + + N
Sbjct: 204 VLSSSPAEKMDSCLRKGAYG-PRDSEADDPEKRVEQKPKTTFDPERKELKETEPDVLDN- 261
Query: 165 MVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGSRQPSPTDDGSELXXXXXXXXXXXXKPA 224
P NG+ N++ V +SRTPG+ P PT EL KPA
Sbjct: 262 --P---NGLPNQNGLDVD-----VKDFSRTPGNC-P-PTGQEVELGGPEMVGGAGP-KPA 308
Query: 225 R-FSDSSDHGVT 235
FS+ VT
Sbjct: 309 EEFSNVETQNVT 320
Score = 136 (52.9 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 33/59 (55%), Positives = 38/59 (64%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSK 287
+SDH V+Q + MV RRPG F G VLSPRS +S GLGV MVEYVL +SP K
Sbjct: 158 ASDHSVSQPI-MVQ--RRPGQGFHGVGEAGSVLSPRS-ESGGLGVSMVEYVLSSSPAEK 212
>UNIPROTKB|F1NV23 [details] [associations]
symbol:PUM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 GeneTree:ENSGT00390000017241 EMBL:AADN02018552
EMBL:AADN02018553 EMBL:AADN02018554 EMBL:AADN02018555
IPI:IPI00735100 Ensembl:ENSGALT00000026590 Uniprot:F1NV23
Length = 1061
Score = 222 (83.2 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 76/196 (38%), Positives = 97/196 (49%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKK W +DS K G GI L D+ WR++ W T H ++Q + MV R+PG F
Sbjct: 21 AKKFWE----PDDSAKDGQKGIF-LGDE-WRETAWGTPHHSMSQPI-MVQ--RKPGQGFH 71
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR-GLVLNSDGSDVKKEK 139
G VLSPRS +S GLGV MVEYVL +SP K L+ R R G D EK
Sbjct: 72 GNSEVNAVLSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGAFGTRDAETDGPEK 127
Query: 140 --DKAPASPY--DVKKELV--DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K ASP+ D ++L D + NG + NG+D + K ++R
Sbjct: 128 GDQKGKASPFEEDKNRDLKQGDDEDVTKINGRG--LPNGMDADCKD-----------FNR 174
Query: 194 TPGSRQPSPTDDGSEL 209
TPGSRQ SPT+ L
Sbjct: 175 TPGSRQASPTEVAERL 190
Score = 37 (18.1 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLG 272
R PG+ A L P S + GLG
Sbjct: 174 RTPGSRQASPTEVAERLGPNPSTTEGLG 201
>UNIPROTKB|E1BWC0 [details] [associations]
symbol:PUM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0034063 "stress
granule assembly" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0048471 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 GO:GO:0010494 GO:GO:0034063
GeneTree:ENSGT00390000017241 OMA:LFDYSSQ EMBL:AADN02018552
EMBL:AADN02018553 EMBL:AADN02018554 EMBL:AADN02018555
IPI:IPI00682927 Ensembl:ENSGALT00000026591 Uniprot:E1BWC0
Length = 1062
Score = 222 (83.2 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 76/196 (38%), Positives = 97/196 (49%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKK W +DS K G GI L D+ WR++ W T H ++Q + MV R+PG F
Sbjct: 21 AKKFWE----PDDSAKDGQKGIF-LGDE-WRETAWGTPHHSMSQPI-MVQ--RKPGQGFH 71
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR-GLVLNSDGSDVKKEK 139
G VLSPRS +S GLGV MVEYVL +SP K L+ R R G D EK
Sbjct: 72 GNSEVNAVLSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGAFGTRDAETDGPEK 127
Query: 140 --DKAPASPY--DVKKELV--DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K ASP+ D ++L D + NG + NG+D + K ++R
Sbjct: 128 GDQKGKASPFEEDKNRDLKQGDDEDVTKINGRG--LPNGMDADCKD-----------FNR 174
Query: 194 TPGSRQPSPTDDGSEL 209
TPGSRQ SPT+ L
Sbjct: 175 TPGSRQASPTEVAERL 190
Score = 37 (18.1 bits), Expect = 4.0e-18, Sum P(2) = 4.0e-18
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 245 RRPGATFPGTDNGAGVLSPRSSDSSGLG 272
R PG+ A L P S + GLG
Sbjct: 174 RTPGSRQASPTEVAERLGPNPSTTEGLG 201
>UNIPROTKB|Q2VB19 [details] [associations]
symbol:PUM1 "Pumilio homolog 1" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806
PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025 GO:GO:0005737
GO:GO:0006417 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 eggNOG:COG5099 GeneTree:ENSGT00390000017241
HSSP:Q14671 EMBL:DQ275191 EMBL:AJ851393 IPI:IPI00581936
IPI:IPI00682137 RefSeq:NP_001012858.1 UniGene:Gga.22920
ProteinModelPortal:Q2VB19 SMR:Q2VB19 Ensembl:ENSGALT00000000834
Ensembl:ENSGALT00000035201 GeneID:419554 KEGG:gga:419554 CTD:9698
HOGENOM:HOG000238461 HOVERGEN:HBG049462 InParanoid:Q2VB19
OMA:RHVVGVK OrthoDB:EOG4P8FHP NextBio:20822590 Uniprot:Q2VB19
Length = 1189
Score = 232 (86.7 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 79/190 (41%), Positives = 91/190 (47%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L DQ WRDS W TSDH V+Q + MV RRPG F
Sbjct: 150 KKFWE----SDDSSKDGPKGIF-LGDQ-WRDSAWGTSDHSVSQPI-MVQ--RRPGQGFHV 200
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS---KDNGLEPRMRGLVLNSDGSDVKKE 138
VLSPRS +S GLGV MVEYVL +SP + G PR N G KK
Sbjct: 201 NSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSCLRKGGFGPRDAENDENDKGD--KKN 257
Query: 139 KDKAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGSR 198
K KE D +TNG+ PV QNGID + K +S PG C +
Sbjct: 258 KGTFDGDKLGDLKEEGDVMD--KTNGL-PV-QNGIDTDVK-DFSRTPGN--CQNSASEVD 310
Query: 199 QPSPTDDGSE 208
P +GSE
Sbjct: 311 LLGPNQNGSE 320
Score = 120 (47.3 bits), Expect = 0.00055, P = 0.00055
Identities = 34/69 (49%), Positives = 40/69 (57%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTS-- 286
+SDH V+Q + MV RRPG F VLSPRS +S GLGV MVEYVL +SP
Sbjct: 179 TSDHSVSQPI-MVQ--RRPGQGFHVNSEVNSVLSPRS-ESGGLGVSMVEYVLSSSPGDSC 234
Query: 287 -KDNGLEPR 294
+ G PR
Sbjct: 235 LRKGGFGPR 243
>MGI|MGI:1931751 [details] [associations]
symbol:Pum2 "pumilio 2 (Drosophila)" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0030425
"dendrite" evidence=ISO] [GO:0034063 "stress granule assembly"
evidence=ISO;IDA] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 MGI:MGI:1931751 GO:GO:0048471
GO:GO:0006417 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0043025 GO:GO:0030425 GO:GO:0003723 GO:GO:0010494
GO:GO:0034063 eggNOG:COG5099 GeneTree:ENSGT00390000017241
HOGENOM:HOG000238461 HOVERGEN:HBG049462 OrthoDB:EOG4P8FHP CTD:23369
ChiTaRS:PUM2 EMBL:AY027917 EMBL:AF315590 EMBL:AK122225
EMBL:BC013765 EMBL:BC041773 IPI:IPI00112203 IPI:IPI00400191
IPI:IPI00400192 RefSeq:NP_001153691.1 RefSeq:NP_001153694.1
RefSeq:NP_109648.2 UniGene:Mm.341243 PDB:3GVO PDB:3GVT PDBsum:3GVO
PDBsum:3GVT ProteinModelPortal:Q80U58 SMR:Q80U58 IntAct:Q80U58
STRING:Q80U58 PhosphoSite:Q80U58 PaxDb:Q80U58 PRIDE:Q80U58
Ensembl:ENSMUST00000163569 Ensembl:ENSMUST00000168361
Ensembl:ENSMUST00000169089 Ensembl:ENSMUST00000178015 GeneID:80913
KEGG:mmu:80913 UCSC:uc007mzw.2 UCSC:uc007mzy.2 UCSC:uc007naa.2
InParanoid:Q80U58 OMA:LFDYSSQ EvolutionaryTrace:Q80U58
NextBio:350290 Bgee:Q80U58 CleanEx:MM_PUM2 Genevestigator:Q80U58
GermOnline:ENSMUSG00000020594 Uniprot:Q80U58
Length = 1066
Score = 225 (84.3 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 73/188 (38%), Positives = 94/188 (50%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + MV RR G +F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPI-MVQ--RRSGQSFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR-GLVLNSDGSDVKKEK- 139
+LSPRS +S GLGV MVEYVL +SP K L+ R R G D EK
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 140 -DKAPASPY--DVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPG 196
K ASP+ D ++L + NG + NG+D + K ++RTPG
Sbjct: 130 DQKGKASPFEEDQNRDLKQDDEDSKINGRG--LPNGMDADCKD-----------FNRTPG 176
Query: 197 SRQPSPTD 204
SRQ SPT+
Sbjct: 177 SRQASPTE 184
Score = 118 (46.6 bits), Expect = 0.00081, P = 0.00081
Identities = 32/68 (47%), Positives = 41/68 (60%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + MV RR G +F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 TSHHSMSQPI-MVQ--RRSGQSFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>UNIPROTKB|C9JW01 [details] [associations]
symbol:PUM2 "Pumilio homolog 2" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0010494 "cytoplasmic
stress granule" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] GO:GO:0005737
GO:GO:0003723 GO:GO:0010494 GO:GO:0034063 EMBL:AC007041
HGNC:HGNC:14958 ChiTaRS:PUM2 IPI:IPI00892704
ProteinModelPortal:C9JW01 STRING:C9JW01 Ensembl:ENST00000442400
HOGENOM:HOG000203808 ArrayExpress:C9JW01 Bgee:C9JW01 Uniprot:C9JW01
Length = 293
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 74/191 (38%), Positives = 93/191 (48%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W S H ++Q + MV RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGASHHSMSQPI-MVQ--RRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR-GLVLNSDGSDVKKEK- 139
+LSPRS +S GLGV MVEYVL +SP K L+ R R G D EK
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 140 -DKAPASPY--DVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K ASP+ D ++L D I G+ P NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL-P---NGMDADCKD-----------FNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
Score = 115 (45.5 bits), Expect = 0.00026, P = 0.00026
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
+S H ++Q + MV RR G F G +LSPRS +S GLGV MVEYVL +SP K
Sbjct: 52 ASHHSMSQPI-MVQ--RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK- 106
Query: 289 NGLEPRMR 296
L+ R R
Sbjct: 107 --LDSRFR 112
>UNIPROTKB|E2RT57 [details] [associations]
symbol:PUM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0034063 "stress granule assembly" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0048471 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 GO:GO:0010494 GO:GO:0034063
GeneTree:ENSGT00390000017241 CTD:23369 OMA:LFDYSSQ
EMBL:AAEX03010760 RefSeq:XP_849088.1 Ensembl:ENSCAFT00000006180
GeneID:607618 KEGG:cfa:607618 Uniprot:E2RT57
Length = 1063
Score = 218 (81.8 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 75/191 (39%), Positives = 94/191 (49%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + MV RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPI-MVQ--RRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR-GLVLNSDGSDVKKEK- 139
+LSPRS +S GLGV MVEYVL +SP K L+ R R G D EK
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 129
Query: 140 -DKAPASPY--DVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K ASP+ D ++L D I G+ P NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL-P---NGMDADCKD-----------FNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
>UNIPROTKB|F1SCU6 [details] [associations]
symbol:PUM2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0048471 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 GO:GO:0010494 GO:GO:0034063
GeneTree:ENSGT00390000017241 OMA:LFDYSSQ EMBL:AEMK01186664
EMBL:CU466989 Ensembl:ENSSSCT00000009411 Uniprot:F1SCU6
Length = 1064
Score = 218 (81.8 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 75/191 (39%), Positives = 94/191 (49%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + MV RR G F G
Sbjct: 26 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPI-MVQ--RRSGQGFHG 77
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR-GLVLNSDGSDVKKEK- 139
+LSPRS +S GLGV MVEYVL +SP K L+ R R G D EK
Sbjct: 78 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 133
Query: 140 -DKAPASPY--DVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K ASP+ D ++L D I G+ P NG+D + K ++R
Sbjct: 134 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL-P---NGMDADCKD-----------FNR 178
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 179 TPGSRQASPTE 189
>UNIPROTKB|F1N2B8 [details] [associations]
symbol:PUM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0010494
"cytoplasmic stress granule" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0048471 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0003723 GO:GO:0010494 GO:GO:0034063
GeneTree:ENSGT00390000017241 OMA:LFDYSSQ EMBL:DAAA02031737
IPI:IPI00703675 Ensembl:ENSBTAT00000014813 Uniprot:F1N2B8
Length = 1069
Score = 218 (81.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 75/191 (39%), Positives = 94/191 (49%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W TS H ++Q + MV RR G F G
Sbjct: 26 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGTSHHSMSQPI-MVQ--RRSGQGFHG 77
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR-GLVLNSDGSDVKKEK- 139
+LSPRS +S GLGV MVEYVL +SP K L+ R R G D EK
Sbjct: 78 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGTFGTRDAETDGPEKG 133
Query: 140 -DKAPASPY--DVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K ASP+ D ++L D I G+ P NG+D + K ++R
Sbjct: 134 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL-P---NGMDADCKD-----------FNR 178
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 179 TPGSRQASPTE 189
>UNIPROTKB|Q8TB72 [details] [associations]
symbol:PUM2 "Pumilio homolog 2" species:9606 "Homo sapiens"
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001313 InterPro:IPR016024
Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303 SMART:SM00025
GO:GO:0048471 EMBL:CH471053 GO:GO:0006417 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723 GO:GO:0010494
GO:GO:0034063 eggNOG:COG5099 HOGENOM:HOG000238461
HOVERGEN:HBG049462 EMBL:AF315591 EMBL:D87078 EMBL:AC007041
EMBL:AK093847 EMBL:BC024218 EMBL:BC112046 EMBL:BC112048
EMBL:AF272350 IPI:IPI00022184 IPI:IPI00398749 IPI:IPI00398750
RefSeq:NP_056132.1 UniGene:Hs.467824 PDB:3Q0Q PDB:3Q0R PDB:3Q0S
PDBsum:3Q0Q PDBsum:3Q0R PDBsum:3Q0S ProteinModelPortal:Q8TB72
SMR:Q8TB72 IntAct:Q8TB72 MINT:MINT-254513 STRING:Q8TB72
PhosphoSite:Q8TB72 DMDM:41688714 PaxDb:Q8TB72 PRIDE:Q8TB72
Ensembl:ENST00000319801 Ensembl:ENST00000338086
Ensembl:ENST00000361078 Ensembl:ENST00000403432
Ensembl:ENST00000440577 GeneID:23369 KEGG:hsa:23369 UCSC:uc002rds.1
CTD:23369 GeneCards:GC02M020448 HGNC:HGNC:14958 HPA:HPA030316
MIM:607205 neXtProt:NX_Q8TB72 PharmGKB:PA34043 InParanoid:Q8TB72
OMA:HITSIPR PhylomeDB:Q8TB72 ChiTaRS:PUM2 EvolutionaryTrace:Q8TB72
GenomeRNAi:23369 NextBio:45440 ArrayExpress:Q8TB72 Bgee:Q8TB72
CleanEx:HS_PUM2 Genevestigator:Q8TB72 GermOnline:ENSG00000055917
Uniprot:Q8TB72
Length = 1066
Score = 211 (79.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 74/191 (38%), Positives = 93/191 (48%)
Query: 22 KKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFPG 81
KK W +DS K G GI L D WR++ W S H ++Q + MV RR G F G
Sbjct: 22 KKFWE----PDDSTKDGQKGIF-LGDDEWRETAWGASHHSMSQPI-MVQ--RRSGQGFHG 73
Query: 82 TDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR-GLVLNSDGSDVKKEK- 139
+LSPRS +S GLGV MVEYVL +SP K L+ R R G D EK
Sbjct: 74 NSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRDAETDGPEKG 129
Query: 140 -DKAPASPY--DVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSR 193
K ASP+ D ++L D I G+ P NG+D + K ++R
Sbjct: 130 DQKGKASPFEEDQNRDLKQGDDDDSKINGRGL-P---NGMDADCKD-----------FNR 174
Query: 194 TPGSRQPSPTD 204
TPGSRQ SPT+
Sbjct: 175 TPGSRQASPTE 185
>ZFIN|ZDB-GENE-081031-76 [details] [associations]
symbol:pum2 "pumilio homolog 2 (Drosophila)"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 ZFIN:ZDB-GENE-081031-76
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723
GeneTree:ENSGT00390000017241 EMBL:CABZ01062788 EMBL:CABZ01062789
EMBL:CABZ01062790 EMBL:CU468963 IPI:IPI00864826
Ensembl:ENSDART00000086578 Bgee:F1R4Q6 Uniprot:F1R4Q6
Length = 1206
Score = 206 (77.6 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 65/187 (34%), Positives = 95/187 (50%)
Query: 21 AKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHGVTQGMAMVPSARRPGATFP 80
AKKLW +E +D K L + WR++ WS+S H ++Q + MV +RPG +
Sbjct: 141 AKKLWESDELAKDGRKA------MLVGEEWRENAWSSSHHALSQPI-MVQ--KRPGQGYN 191
Query: 81 GTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGL-VLNSDGSDVKKEK 139
GT + VLSPRS + GLGV MVEYVL +SP K +G R G ++D +K +
Sbjct: 192 GTGETSSVLSPRS-EGGGLGVSMVEYVLSSSPGDKMDG-RYRNGGYGEADADPDGREKGE 249
Query: 140 DKAPASPYDVKK--ELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPGS 197
K +SP++ K E+ + + NG+D + K ++ TPGS
Sbjct: 250 SKEKSSPFEENKSPEMKVGDEGDTSKANARGLLNGMDRDCKD-----------FNPTPGS 298
Query: 198 RQPSPTD 204
RQ SPT+
Sbjct: 299 RQASPTE 305
Score = 125 (49.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 31/62 (50%), Positives = 40/62 (64%)
Query: 229 SSDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKD 288
SS H ++Q + MV +RPG + GT + VLSPRS + GLGV MVEYVL +SP K
Sbjct: 171 SSHHALSQPI-MVQ--KRPGQGYNGTGETSSVLSPRS-EGGGLGVSMVEYVLSSSPGDKM 226
Query: 289 NG 290
+G
Sbjct: 227 DG 228
Score = 40 (19.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 42 ILNLNDQMWRDSTWST-SDHGVTQGMAMVPSARRPGATFPGTDNGAGVLSP 91
IL +ND W+++ T +G + + A P AT G G + P
Sbjct: 7 ILGMNDVPWQETQCGTLHTNGAPETGGVRVHAGCPLATVGGARQVPGGVHP 57
>UNIPROTKB|B4E2B6 [details] [associations]
symbol:PUM2 "Pumilio homolog 2" species:9606 "Homo sapiens"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0010494 "cytoplasmic
stress granule" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001313 InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302
PROSITE:PS50303 SMART:SM00025 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003723 GO:GO:0010494
GO:GO:0034063 HOVERGEN:HBG049462 OrthoDB:EOG4P8FHP EMBL:AC007041
UniGene:Hs.467824 HGNC:HGNC:14958 ChiTaRS:PUM2 EMBL:AK304198
IPI:IPI01009448 SMR:B4E2B6 STRING:B4E2B6 Ensembl:ENST00000536417
UCSC:uc010yjz.1 Uniprot:B4E2B6
Length = 1008
Score = 148 (57.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 55/140 (39%), Positives = 68/140 (48%)
Query: 73 RRPGATFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMR-GLVLNSD 131
RR G F G +LSPRS +S GLGV MVEYVL +SP K L+ R R G D
Sbjct: 9 RRSGQGFHGNSEVNAILSPRS-ESGGLGVSMVEYVLSSSPADK---LDSRFRKGNFGTRD 64
Query: 132 GSDVKKEK--DKAPASPY--DVKKELV---DASGAIQTNGMVPVVQNGIDNEDKYKYSSG 184
EK K ASP+ D ++L D I G+ P NG+D + K
Sbjct: 65 AETDGPEKGDQKGKASPFEEDQNRDLKQGDDDDSKINGRGL-P---NGMDADCKD----- 115
Query: 185 PGGVVCYSRTPGSRQPSPTD 204
++RTPGSRQ SPT+
Sbjct: 116 ------FNRTPGSRQASPTE 129
>FB|FBgn0003165 [details] [associations]
symbol:pum "pumilio" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=NAS;IDA] [GO:0048477 "oogenesis"
evidence=TAS] [GO:0007280 "pole cell migration" evidence=IMP;TAS]
[GO:0042078 "germ-line stem cell division" evidence=NAS;TAS]
[GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0017148
"negative regulation of translation" evidence=TAS] [GO:0007281
"germ cell development" evidence=TAS] [GO:0001709 "cell fate
determination" evidence=TAS] [GO:0045727 "positive regulation of
translation" evidence=TAS] [GO:0008258 "head involution"
evidence=IMP] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0008595 "anterior/posterior axis specification, embryo"
evidence=TAS] [GO:0007067 "mitosis" evidence=TAS] [GO:0045786
"negative regulation of cell cycle" evidence=TAS] [GO:0016477 "cell
migration" evidence=TAS] [GO:0000288 "nuclear-transcribed mRNA
catabolic process, deadenylation-dependent decay" evidence=TAS]
[GO:0000900 "translation repressor activity, nucleic acid binding"
evidence=TAS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0007616 "long-term memory"
evidence=IMP;TAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0050804
"regulation of synaptic transmission" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IDA] [GO:0048149 "behavioral response to ethanol"
evidence=IMP] [GO:0042059 "negative regulation of epidermal growth
factor receptor signaling pathway" evidence=IMP] InterPro:IPR001313
InterPro:IPR016024 Pfam:PF00806 PROSITE:PS50302 PROSITE:PS50303
SMART:SM00025 EMBL:AE014297 GO:GO:0005737 GO:GO:0045892
GO:GO:0007280 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0007067 GO:GO:0008595 GO:GO:0007616 GO:GO:0048477
GO:GO:0048813 GO:GO:0003730 GO:GO:0045727 GO:GO:0042059
GO:GO:0001709 GO:GO:0045786 GO:GO:0008582 GO:GO:0000288
GO:GO:0000900 GO:GO:0008258 GO:GO:0042078 GO:GO:0050804
eggNOG:COG5099 GeneTree:ENSGT00390000017241 EMBL:X62589 EMBL:L07943
EMBL:BT001872 EMBL:BT009970 EMBL:BT021317 PIR:A46221
RefSeq:NP_524285.2 RefSeq:NP_731314.1 RefSeq:NP_731315.1
RefSeq:NP_731316.2 RefSeq:NP_788604.1 UniGene:Dm.1115 PDB:3H3D
PDBsum:3H3D ProteinModelPortal:P25822 SMR:P25822 MINT:MINT-822094
STRING:P25822 PaxDb:P25822 EnsemblMetazoa:FBtr0081990
EnsemblMetazoa:FBtr0081991 EnsemblMetazoa:FBtr0081992
EnsemblMetazoa:FBtr0333667 GeneID:41094 KEGG:dme:Dmel_CG9755
UCSC:CG9755-RA CTD:41094 FlyBase:FBgn0003165 InParanoid:P25822
OMA:LASPTIC OrthoDB:EOG4HMGRT PhylomeDB:P25822
EvolutionaryTrace:P25822 GenomeRNAi:41094 NextBio:822132
Bgee:P25822 GermOnline:CG9755 Uniprot:P25822
Length = 1533
Score = 143 (55.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 62/189 (32%), Positives = 83/189 (43%)
Query: 20 SAKKLWGVEEGKEDSHKTGGGGILNLNDQMWRDSTWSTSDHG-VTQGM-AMVPSARRPGA 77
+AKKLW +GK S T GG + L D + DH TQG +VP R A
Sbjct: 377 TAKKLWEKSDGKGVSSSTPGGPLHPLQIPGIGDPSSVWKDHTWSTQGENILVPPPSRAYA 436
Query: 78 TFPGTDNGAGVLSPRSSDSSGLGVKMVEYVLGTSPTSKDNGLEPRMRGLVLNSDGSDVKK 137
+D + S K+VEYV SPT+KD+ L + + N D K
Sbjct: 437 HGGASDTSNSGNAGILSPRDSTCAKVVEYVFSGSPTNKDSSLSG-LEPHLRNLKFDDNDK 495
Query: 138 EKD-KAPASPYDVKKELVDASGAIQTNGMVPVVQNGIDNEDKYKYSSGPGGVVCYSRTPG 196
+D K A+ L +NG+V NGID +DK G ++RTPG
Sbjct: 496 SRDDKEKANSPFDTNGLKKDDQVTNSNGVV----NGID-DDK-----G------FNRTPG 539
Query: 197 SRQPSPTDD 205
SRQPSP ++
Sbjct: 540 SRQPSPAEE 548
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.308 0.129 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 301 289 0.00088 115 3 11 23 0.38 35
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 608 (65 KB)
Total size of DFA: 191 KB (2106 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.08u 0.09s 25.17t Elapsed: 00:00:03
Total cpu time: 25.08u 0.09s 25.17t Elapsed: 00:00:03
Start: Thu Aug 15 14:45:47 2013 End: Thu Aug 15 14:45:50 2013