BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7649
(100 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZBW2|HAOX2_BOVIN Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 SV=1
Length = 353
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/51 (64%), Positives = 37/51 (72%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
+EVYLDGGIR G DV KA+ LGAK VFVGR LWGLA+ G +G VL L
Sbjct: 274 VEVYLDGGIRTGNDVLKALALGAKCVFVGRPILWGLAYKGEHGVKEVLDIL 324
>sp|Q9WU19|HAOX1_MOUSE Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2 SV=1
Length = 370
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 37/51 (72%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
+EV+LDGG+R GTDV KA+ LGAK VFVGR +WGLA G G VL+ L
Sbjct: 286 VEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLAFQGEKGVQDVLEIL 336
>sp|Q07523|HAOX2_RAT Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2 PE=1 SV=2
Length = 353
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 39/55 (70%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKI 55
+EVY+DGG+R GTDV KA+ LGA+ +F+GR LWGLA G +G VL L ++
Sbjct: 274 IEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAEL 328
>sp|Q9NYQ3|HAOX2_HUMAN Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2 SV=1
Length = 351
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHK 54
+EVYLDGG+R G DV KA+ LGAK +F+GR LWGLA G +G VL L ++
Sbjct: 272 IEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEHGVKEVLNILTNE 325
>sp|Q9UJM8|HAOX1_HUMAN Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1 SV=1
Length = 370
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 37/51 (72%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
+EV+LDGG+R GTDV KA+ LGAK VFVGR +WGLA G G VL+ L
Sbjct: 286 VEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEIL 336
>sp|Q9NYQ2|HAOX2_MOUSE Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1
Length = 353
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
+EVY+DGG+R G DV KA+ LGA+ +F+GR +WGLA G +G VL L
Sbjct: 274 IEVYMDGGVRTGNDVLKALALGARCIFLGRPIIWGLACKGEDGVKEVLDIL 324
>sp|O49506|GLO5_ARATH Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 OS=Arabidopsis thaliana
GN=GLO5 PE=1 SV=1
Length = 368
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 37/51 (72%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
+ V+LDGG+R GTDVFKA+ LGA VFVGR +L+ LA G G ++LQ L
Sbjct: 280 IPVFLDGGVRRGTDVFKALALGASGVFVGRPSLFSLAADGEAGVRKMLQML 330
>sp|Q7FAS1|GLO3_ORYSJ Peroxisomal (S)-2-hydroxy-acid oxidase GLO3 OS=Oryza sativa subsp.
japonica GN=GLO3 PE=2 SV=1
Length = 367
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 36/51 (70%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
+ V+LDGG+R GTDVFKA+ LGA VF+GR L+ LA G G +VLQ L
Sbjct: 281 LPVFLDGGVRRGTDVFKALALGASGVFIGRPVLFSLAVDGEAGVRKVLQML 331
>sp|B8AUI3|GLO3_ORYSI Peroxisomal (S)-2-hydroxy-acid oxidase GLO3 OS=Oryza sativa subsp.
indica GN=GLO3 PE=3 SV=1
Length = 367
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 36/51 (70%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
+ V+LDGG+R GTDVFKA+ LGA VF+GR L+ LA G G +VLQ L
Sbjct: 281 LPVFLDGGVRRGTDVFKALALGASGVFIGRPVLFSLAVDGEAGVRKVLQML 331
>sp|P95040|MFTD_MYCTU Putative mycofactocin system heme/flavin oxidoreductase MftD
OS=Mycobacterium tuberculosis GN=mftD PE=3 SV=2
Length = 396
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAV 60
+EV LDGGIR G+DV KA+ LGA+ V +GRA LWGLA +G G VL L I ++
Sbjct: 304 VEVLLDGGIRRGSDVVKAVALGARAVMIGRAYLWGLAANGQAGVENVLDILRGGI--DSA 361
Query: 61 ADKVHNAYSIFFLELNNLVPTLLLGSIQPPSKR 93
+ +A + LVPT + + PS+R
Sbjct: 362 LMGLGHASVHDLSPADILVPTGFIRDLGVPSRR 394
>sp|Q9LRS0|GLO2_ARATH Peroxisomal (S)-2-hydroxy-acid oxidase GLO2 OS=Arabidopsis thaliana
GN=GLO2 PE=1 SV=1
Length = 367
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
V+LDGG+R GTDVFKA+ LGA +F+GR ++ LA G G +VLQ L
Sbjct: 282 VFLDGGVRRGTDVFKALALGASGIFIGRPVVFALAAEGEAGVKKVLQML 330
>sp|Q9LRR9|GLO1_ARATH Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 OS=Arabidopsis thaliana
GN=GLO1 PE=1 SV=1
Length = 367
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
+ V+LDGG+R GTDVFKA+ LGA +F+GR ++ LA G G +VLQ L
Sbjct: 280 IPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQML 330
>sp|Q6YT73|GLO5_ORYSJ Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 OS=Oryza sativa subsp.
japonica GN=GLO5 PE=2 SV=1
Length = 369
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
+ V+LDGG+R GTDVFKA+ LGA VF+GR ++ LA +G G VLQ L
Sbjct: 281 LPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAAGEAGVRNVLQML 331
>sp|B8B7C5|GLO5_ORYSI Peroxisomal (S)-2-hydroxy-acid oxidase GLO5 OS=Oryza sativa subsp.
indica GN=GLO5 PE=3 SV=1
Length = 369
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
+ V+LDGG+R GTDVFKA+ LGA VF+GR ++ LA +G G VLQ L
Sbjct: 281 LPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAAGEAGVRNVLQML 331
>sp|P05414|GOX_SPIOL Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea PE=1
SV=1
Length = 369
Score = 58.9 bits (141), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
V+LDGG+R GTDVFKA+ LGA VF+GR ++ LA G G +VLQ +
Sbjct: 282 VFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEAGVKKVLQMM 330
>sp|Q24JJ8|GLO3_ARATH Peroxisomal (S)-2-hydroxy-acid oxidase GLO3 OS=Arabidopsis thaliana
GN=GLO3 PE=2 SV=1
Length = 363
Score = 58.9 bits (141), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
V LDGG+R GTDVFKA+ LGA+ V +GR ++GLA G +G +V+ L
Sbjct: 280 VLLDGGVRRGTDVFKALALGAQAVLIGRPIIYGLAAKGEDGVKKVIDML 328
>sp|Q9LJH5|GLO4_ARATH Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 OS=Arabidopsis thaliana
GN=GLO4 PE=2 SV=1
Length = 363
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
V LDGG+R GTDVFKA+ LGA+ V +GR ++GLA G +G +V+ L
Sbjct: 280 VLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGLAAKGEDGVKKVIDML 328
>sp|Q8H3I4|GLO4_ORYSJ Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 OS=Oryza sativa subsp.
japonica GN=GLO4 PE=2 SV=2
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
V +DGGIR GTDVFKA+ LGA+ V VGR +GLA G GA V++ L
Sbjct: 283 VLVDGGIRRGTDVFKALALGARAVMVGRPVFFGLAARGEAGARHVIEML 331
>sp|Q10CE4|GLO1_ORYSJ Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 OS=Oryza sativa subsp.
japonica GN=GLO1 PE=1 SV=1
Length = 369
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
VYLDGG+R GTDVFKA+ LGA VF+GR ++ LA G G VL+ +
Sbjct: 283 VYLDGGVRRGTDVFKALALGAAGVFIGRPVVFALAAEGEAGVRNVLRMM 331
>sp|B8AKX6|GLO1_ORYSI Peroxisomal (S)-2-hydroxy-acid oxidase GLO1 OS=Oryza sativa subsp.
indica GN=GLO1 PE=3 SV=1
Length = 369
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
VYLDGG+R GTDVFKA+ LGA VF+GR ++ LA G G VL+ +
Sbjct: 283 VYLDGGVRRGTDVFKALALGAAGVFIGRPVVFALAAEGEAGVRNVLRMM 331
>sp|Q54E41|HAOX_DICDI Hydroxyacid oxidase OS=Dictyostelium discoideum GN=haox PE=3 SV=1
Length = 388
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 31/47 (65%)
Query: 5 LDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
LDGGIR GTDV KA+ GA V +GR +WGL+ G +G +VL L
Sbjct: 309 LDGGIRRGTDVLKALAFGANAVCIGRPIIWGLSTGGKDGVLKVLNLL 355
>sp|Q7XPR4|GLO2_ORYSJ Peroxisomal (S)-2-hydroxy-acid oxidase GLO2 OS=Oryza sativa subsp.
japonica GN=GLO2 PE=2 SV=3
Length = 368
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
V++D G R GTDVFKA+ LGA VF+GR L+ LA G G L+ L
Sbjct: 283 VFIDSGFRRGTDVFKALALGASGVFIGRPVLFSLAIDGEAGVRNALRML 331
>sp|Q01KC2|GLO2_ORYSI Peroxisomal (S)-2-hydroxy-acid oxidase GLO2 OS=Oryza sativa subsp.
indica GN=GLO2 PE=3 SV=2
Length = 368
Score = 52.8 bits (125), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
V++D G R GTDVFKA+ LGA VF+GR L+ LA G G L+ L
Sbjct: 283 VFIDSGFRRGTDVFKALALGASGVFIGRPVLFSLAIDGEAGVRNALRML 331
>sp|P09437|CYB2_HANAN Cytochrome b2, mitochondrial OS=Hansenula anomala GN=CYB2 PE=1 SV=2
Length = 573
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKI 55
+++++DGG+R GTDV KA+ LGAK V +GR L+ ++ G G + +Q L +I
Sbjct: 463 IDIFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYAMSSYGDKGVTKAIQLLKDEI 517
>sp|P00175|CYB2_YEAST Cytochrome b2, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CYB2 PE=1 SV=1
Length = 591
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKI 55
+EV++DGG+R GTDV KA+ LGAK V +GR L+ + G NG + ++ L +I
Sbjct: 484 LEVFVDGGVRRGTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEI 538
>sp|Q9HDX2|YKN3_SCHPO Uncharacterized lactate 2-monooxygenase PB1A11.03
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAPB1A11.03 PE=3 SV=1
Length = 407
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLV 52
++V D G+R G D+ KA+ LGAK V +GR ++GLA GS+G + V++ L+
Sbjct: 327 LDVLFDSGVRSGADIAKALALGAKMVLIGRPYVYGLALEGSSGVSHVIRCLL 378
>sp|B8B8K5|GLO4_ORYSI Peroxisomal (S)-2-hydroxy-acid oxidase GLO4 OS=Oryza sativa subsp.
indica GN=GLO4 PE=2 SV=2
Length = 366
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 31/49 (63%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
V +DGGIR GTDVFKA+ LGA+ V +GLA G GA V++ L
Sbjct: 283 VLVDGGIRRGTDVFKALALGARAVMXXXPVFFGLAARGEAGARHVIEML 331
>sp|P20932|MDLB_PSEPU (S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1
Length = 393
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKI 55
V +D G R G+D+ KA+ LGA+ V +GRA L+GLA G G VL L I
Sbjct: 300 VLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLAARGETGVDEVLTLLKADI 352
>sp|A7MNF6|LLDD_CROS8 L-lactate dehydrogenase [cytochrome] OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=lldD PE=3 SV=1
Length = 401
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAV 60
+ + D GIR G DV + I LGA V +GRA L+ LA G G A +L +L+ K + V
Sbjct: 301 ITILADSGIRNGLDVVRMIALGADSVLLGRAYLYALATHGEKGVANLL-NLIEKEM--RV 357
Query: 61 ADKVHNAYSIFFLELNNLVPTLLLGSI 87
A + A SI + +LVP+ S+
Sbjct: 358 AMTLTGAKSIKEITRESLVPSPEFTSV 384
>sp|Q8Z2E5|LLDD_SALTI L-lactate dehydrogenase [cytochrome] OS=Salmonella typhi GN=lldD
PE=3 SV=1
Length = 396
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 6 DGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVADKVH 65
D GIR G DV + I LGA V +GRA L+ LA +G G A +L L+ K + VA +
Sbjct: 306 DSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKTGVANLLD-LIEKEM--KVAMTLT 362
Query: 66 NAYSIFFLELNNLVPTL---LLGSIQPPSK 92
A SI + ++LV L L ++ P SK
Sbjct: 363 GAKSISEISGDSLVQELGKSLPAALAPMSK 392
>sp|B5BHX7|LLDD_SALPK L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi A
(strain AKU_12601) GN=lldD PE=3 SV=1
Length = 396
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 6 DGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVADKVH 65
D GIR G DV + I LGA V +GRA L+ LA +G G A +L LV K + VA +
Sbjct: 306 DSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLD-LVEKEM--KVAMTLT 362
Query: 66 NAYSIFFLELNNLVPTL---LLGSIQPPSK 92
A SI + ++LV L L ++ P SK
Sbjct: 363 GAKSISEISGDSLVQELGKSLPAALAPMSK 392
>sp|Q5PLQ7|LLDD_SALPA L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi A
(strain ATCC 9150 / SARB42) GN=lldD PE=3 SV=1
Length = 396
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 6 DGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVADKVH 65
D GIR G DV + I LGA V +GRA L+ LA +G G A +L LV K + VA +
Sbjct: 306 DSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLD-LVEKEM--KVAMTLT 362
Query: 66 NAYSIFFLELNNLVPTL---LLGSIQPPSK 92
A SI + ++LV L L ++ P SK
Sbjct: 363 GAKSISEISGDSLVQELGKSLPAALAPMSK 392
>sp|A8ARJ1|LLDD_CITK8 L-lactate dehydrogenase [cytochrome] OS=Citrobacter koseri (strain
ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=lldD PE=3 SV=1
Length = 396
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 6 DGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVADKVH 65
D GIR G DV + I LGA V +GRA L+ LA +G G A +L L+ K + VA +
Sbjct: 306 DSGIRNGLDVVRMIALGADSVLLGRAYLYALATAGQAGVANLLD-LIEKEM--KVAMTLT 362
Query: 66 NAYSIFFLELNNLVPTL 82
A SI + ++LV L
Sbjct: 363 GAKSISEISRDSLVQEL 379
>sp|P21795|LA2M_MYCSM Lactate 2-monooxygenase OS=Mycobacterium smegmatis PE=1 SV=3
Length = 394
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLV 52
V D GIR G DV KA+ +GA V +GR WG A GS G V +SL+
Sbjct: 318 VLFDSGIRTGADVVKALAMGASAVGIGRPYAWGAALGGSKGIEHVARSLL 367
>sp|B4TZU7|LLDD_SALSV L-lactate dehydrogenase [cytochrome] OS=Salmonella schwarzengrund
(strain CVM19633) GN=lldD PE=3 SV=1
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 6 DGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVADKVH 65
D GIR G DV + I LGA V +GRA L+ LA +G G A +L L+ K + VA +
Sbjct: 306 DSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLD-LIEKEM--KVAMTLT 362
Query: 66 NAYSIFFLELNNLVPTL---LLGSIQPPSK 92
A SI + ++LV L L ++ P SK
Sbjct: 363 GAKSISEISGDSLVQELGRSLPAALAPMSK 392
>sp|Q1R4Z0|LLDD_ECOUT L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain
UTI89 / UPEC) GN=lldD PE=3 SV=1
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVAD 62
+ D GIR G DV + I LGA V +GRA L+ LA +G G A +L +L+ K + VA
Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLL-NLIEKEM--KVAM 359
Query: 63 KVHNAYSIFFLELNNLVPTL 82
+ A SI + ++LV L
Sbjct: 360 TLTGAKSISEITQDSLVQVL 379
>sp|B7MFG9|LLDD_ECO45 L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=lldD PE=3 SV=1
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVAD 62
+ D GIR G DV + I LGA V +GRA L+ LA +G G A +L +L+ K + VA
Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLL-NLIEKEM--KVAM 359
Query: 63 KVHNAYSIFFLELNNLVPTL 82
+ A SI + ++LV L
Sbjct: 360 TLTGAKSISEITQDSLVQVL 379
>sp|A1AHE2|LLDD_ECOK1 L-lactate dehydrogenase [cytochrome] OS=Escherichia coli O1:K1 /
APEC GN=lldD PE=3 SV=1
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVAD 62
+ D GIR G DV + I LGA V +GRA L+ LA +G G A +L +L+ K + VA
Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLL-NLIEKEM--KVAM 359
Query: 63 KVHNAYSIFFLELNNLVPTL 82
+ A SI + ++LV L
Sbjct: 360 TLTGAKSISEITQDSLVQVL 379
>sp|A9MLC3|LLDD_SALAR L-lactate dehydrogenase [cytochrome] OS=Salmonella arizonae (strain
ATCC BAA-731 / CDC346-86 / RSK2980) GN=lldD PE=3 SV=1
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 6 DGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVADKVH 65
D GIR G DV + I LGA V +GRA L+ LA +G G A +L L+ K + VA +
Sbjct: 306 DSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLD-LIEKEM--KVAMTLT 362
Query: 66 NAYSIFFLELNNLVPTL---LLGSIQPPSK 92
A SI + ++LV L L ++ P SK
Sbjct: 363 GAKSISEISGDSLVQELGKSLPAALAPMSK 392
>sp|Q8ZL61|LLDD_SALTY L-lactate dehydrogenase [cytochrome] OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=lldD PE=3 SV=1
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 6 DGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVADKVH 65
D GIR G DV + I LGA V +GRA L+ LA +G G A +L L+ K + VA +
Sbjct: 306 DSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLD-LIEKEM--KVAMTLT 362
Query: 66 NAYSIFFLELNNLVPTL---LLGSIQPPSK 92
A SI + ++LV L L ++ P SK
Sbjct: 363 GAKSISEISGDSLVQELGKSLPAALAPMSK 392
>sp|B5FLH2|LLDD_SALDC L-lactate dehydrogenase [cytochrome] OS=Salmonella dublin (strain
CT_02021853) GN=lldD PE=3 SV=1
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 6 DGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVADKVH 65
D GIR G DV + I LGA V +GRA L+ LA +G G A +L L+ K + VA +
Sbjct: 306 DSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLD-LIEKEM--KVAMTLT 362
Query: 66 NAYSIFFLELNNLVPTL---LLGSIQPPSK 92
A SI + ++LV L L ++ P SK
Sbjct: 363 GAKSISEISGDSLVQELGKSLPAALAPMSK 392
>sp|B5EXA8|LLDD_SALA4 L-lactate dehydrogenase [cytochrome] OS=Salmonella agona (strain
SL483) GN=lldD PE=3 SV=1
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 6 DGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVADKVH 65
D GIR G DV + I LGA V +GRA L+ LA +G G A +L L+ K + VA +
Sbjct: 306 DSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLD-LIEKEM--KVAMTLT 362
Query: 66 NAYSIFFLELNNLVPTL---LLGSIQPPSK 92
A SI + ++LV L L ++ P SK
Sbjct: 363 GAKSISEISGDSLVQELGKSLPAALAPMSK 392
>sp|B4T986|LLDD_SALHS L-lactate dehydrogenase [cytochrome] OS=Salmonella heidelberg
(strain SL476) GN=lldD PE=3 SV=1
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 6 DGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVADKVH 65
D GIR G DV + I LGA V +GRA L+ LA +G G A +L L+ K + VA +
Sbjct: 306 DSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLD-LIEKEM--KVAMTLT 362
Query: 66 NAYSIFFLELNNLVPTL---LLGSIQPPSK 92
A SI + ++LV L L ++ P SK
Sbjct: 363 GAKSISEISGDSLVQELGRSLPAALAPMSK 392
>sp|B1LK44|LLDD_ECOSM L-lactate dehydrogenase [cytochrome] OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=lldD PE=3 SV=1
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVAD 62
+ D GIR G DV + I LGA V +GRA L+ LA +G G A +L +L+ K + VA
Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLL-NLIEKEM--KVAM 359
Query: 63 KVHNAYSIFFLELNNLVPTL 82
+ A SI + ++LV L
Sbjct: 360 TLTGAKSISEITQDSLVQEL 379
>sp|B7LTL2|LLDD_ESCF3 L-lactate dehydrogenase [cytochrome] OS=Escherichia fergusonii
(strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=lldD
PE=3 SV=1
Length = 396
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 6 DGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVADKVH 65
D GIR G DV + I LGA V +GRA L+ LA +G G A +L +L+ K + VA +
Sbjct: 306 DSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLL-NLIEKEM--KVAMTLT 362
Query: 66 NAYSIFFLELNNLVPTL 82
A SI + ++LV L
Sbjct: 363 GAKSISEISQDSLVQEL 379
>sp|B1J244|LLDD_PSEPW L-lactate dehydrogenase [cytochrome] OS=Pseudomonas putida (strain
W619) GN=lldD PE=3 SV=1
Length = 381
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 1 MEVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQ 49
+++ D GIR G DV + I LGA V +GRA LW LA G G +L+
Sbjct: 301 LKILADSGIRSGLDVVRMIALGADTVLIGRAFLWALAVHGQAGVKNLLE 349
>sp|B4SXA4|LLDD_SALNS L-lactate dehydrogenase [cytochrome] OS=Salmonella newport (strain
SL254) GN=lldD PE=3 SV=1
Length = 396
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 6 DGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVADKVH 65
D GIR G DV + I LGA V +GRA L+ LA +G G A +L L+ K + VA +
Sbjct: 306 DSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLD-LIEKEM--KVAMTLT 362
Query: 66 NAYSIFFLELNNLVPTL---LLGSIQPPSK 92
A SI + ++LV L L ++ P SK
Sbjct: 363 GAKSISEISGDSLVQELGKSLPTALAPMSK 392
>sp|P95143|LLDD_MYCTU Putative L-lactate dehydrogenase [cytochrome] OS=Mycobacterium
tuberculosis GN=lldD PE=3 SV=2
Length = 414
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 2 EVYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSL 51
E+ +D GI G D+ AI LGA+ +GRA L+GL G G R ++ L
Sbjct: 328 EILVDTGIMSGADIVAAIALGARCTLIGRAYLYGLMAGGEAGVNRAIEIL 377
>sp|A9MVJ5|LLDD_SALPB L-lactate dehydrogenase [cytochrome] OS=Salmonella paratyphi B
(strain ATCC BAA-1250 / SPB7) GN=lldD PE=3 SV=1
Length = 396
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 6 DGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVADKVH 65
D GIR G DV + I LGA V +GRA L+ LA +G G A +L L+ K + VA +
Sbjct: 306 DSGIRNGLDVVRMIALGADTVLLGRAYLYALATAGKAGVANLLD-LIEKEM--KVAMTLT 362
Query: 66 NAYSIFFLELNNLVPTL---LLGSIQPPSK 92
A SI + ++LV L L ++ P SK
Sbjct: 363 GAKSISEISGDSLVQELGKSLPTALAPMSK 392
>sp|Q3YVX0|LLDD_SHISS L-lactate dehydrogenase [cytochrome] OS=Shigella sonnei (strain
Ss046) GN=lldD PE=3 SV=1
Length = 396
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 3 VYLDGGIRYGTDVFKAIGLGAKYVFVGRAALWGLAHSGSNGAARVLQSLVHKILPEAVAD 62
+ D GIR G DV + I LGA V +GRA L+ LA +G G A +L +L+ K + VA
Sbjct: 303 ILADSGIRNGLDVVRMIALGADTVLLGRAFLYALATAGQAGVANLL-NLIEKEM--KVAM 359
Query: 63 KVHNAYSIFFLELNNLVPTL 82
+ A SI + ++LV L
Sbjct: 360 TLTGAKSISEITQDSLVQGL 379
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,124,156
Number of Sequences: 539616
Number of extensions: 1309981
Number of successful extensions: 4251
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 4043
Number of HSP's gapped (non-prelim): 238
length of query: 100
length of database: 191,569,459
effective HSP length: 69
effective length of query: 31
effective length of database: 154,335,955
effective search space: 4784414605
effective search space used: 4784414605
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)