Query psy7654
Match_columns 373
No_of_seqs 137 out of 1427
Neff 7.6
Searched_HMMs 29240
Date Fri Aug 16 23:59:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7654.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7654hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z3y_A Lysine-specific histone 100.0 5.2E-37 1.8E-41 323.4 25.6 273 14-371 370-659 (662)
2 2xag_A Lysine-specific histone 100.0 5.9E-36 2E-40 321.5 26.2 272 14-370 541-829 (852)
3 1rsg_A FMS1 protein; FAD bindi 100.0 9E-34 3.1E-38 289.9 25.6 303 14-371 176-508 (516)
4 4gut_A Lysine-specific histone 100.0 6.8E-34 2.3E-38 303.4 23.4 273 12-368 500-775 (776)
5 1s3e_A Amine oxidase [flavin-c 100.0 8.8E-33 3E-37 282.6 25.1 276 8-371 168-455 (520)
6 1b37_A Protein (polyamine oxid 100.0 4.6E-32 1.6E-36 274.0 26.5 281 14-370 172-458 (472)
7 2yg5_A Putrescine oxidase; oxi 100.0 1.2E-32 4.1E-37 275.9 21.1 269 12-372 172-453 (453)
8 2vvm_A Monoamine oxidase N; FA 100.0 1.3E-31 4.4E-36 271.8 22.3 272 5-372 207-487 (495)
9 2iid_A L-amino-acid oxidase; f 100.0 4.9E-31 1.7E-35 267.7 17.0 241 40-371 236-485 (498)
10 3k7m_X 6-hydroxy-L-nicotine ox 100.0 5.4E-30 1.9E-34 254.8 22.3 255 9-369 164-425 (431)
11 2jae_A L-amino acid oxidase; o 100.0 1E-28 3.5E-33 250.1 18.0 245 39-372 233-487 (489)
12 3ayj_A Pro-enzyme of L-phenyla 100.0 5.9E-29 2E-33 261.5 11.4 277 15-370 317-679 (721)
13 3i6d_A Protoporphyrinogen oxid 99.9 1.5E-25 5.1E-30 224.4 19.5 270 8-370 172-468 (470)
14 3lov_A Protoporphyrinogen oxid 99.9 1.8E-24 6.2E-29 217.9 19.0 238 38-372 229-467 (475)
15 2ivd_A PPO, PPOX, protoporphyr 99.9 1.8E-23 6E-28 210.7 20.2 240 39-371 232-474 (478)
16 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 2.8E-23 9.6E-28 200.7 20.4 232 40-370 107-342 (342)
17 1sez_A Protoporphyrinogen oxid 99.9 2.2E-24 7.4E-29 218.9 13.0 244 39-371 237-494 (504)
18 3nks_A Protoporphyrinogen oxid 99.9 1.9E-23 6.6E-28 210.2 16.4 242 39-370 228-474 (477)
19 2e1m_C L-glutamate oxidase; L- 99.8 3.3E-20 1.1E-24 164.7 7.9 115 246-371 37-153 (181)
20 3ka7_A Oxidoreductase; structu 99.8 9.4E-19 3.2E-23 173.2 17.4 261 8-367 158-424 (425)
21 1yvv_A Amine oxidase, flavin-c 99.7 4E-16 1.4E-20 149.1 22.9 220 41-372 106-329 (336)
22 4gde_A UDP-galactopyranose mut 99.7 4.5E-17 1.5E-21 164.8 14.7 259 40-368 217-477 (513)
23 3nrn_A Uncharacterized protein 99.7 1.7E-16 5.7E-21 157.3 17.1 249 9-366 152-403 (421)
24 4dsg_A UDP-galactopyranose mut 99.7 4E-16 1.4E-20 158.3 16.8 266 11-367 162-452 (484)
25 4dgk_A Phytoene dehydrogenase; 99.6 2.1E-15 7.3E-20 152.4 12.8 132 6-146 184-317 (501)
26 2b9w_A Putative aminooxidase; 99.6 3E-14 1E-18 141.0 16.4 243 16-367 172-423 (424)
27 2e1m_B L-glutamate oxidase; L- 99.4 6.3E-15 2.2E-19 123.2 -3.4 106 92-282 4-110 (130)
28 1v0j_A UDP-galactopyranose mut 98.8 8.1E-10 2.8E-14 109.0 2.2 106 9-147 162-275 (399)
29 1i8t_A UDP-galactopyranose mut 98.2 1.7E-06 5.7E-11 84.2 7.0 107 5-147 148-261 (367)
30 2bi7_A UDP-galactopyranose mut 98.2 3.2E-06 1.1E-10 82.8 8.7 98 8-143 155-260 (384)
31 1d5t_A Guanine nucleotide diss 97.7 2.3E-05 7.9E-10 77.8 5.3 65 37-107 226-290 (433)
32 3p1w_A Rabgdi protein; GDI RAB 97.5 0.0001 3.4E-09 74.3 6.1 68 33-105 244-312 (475)
33 3kkj_A Amine oxidase, flavin-c 97.5 0.00045 1.5E-08 60.8 9.5 93 256-372 237-329 (336)
34 1vg0_A RAB proteins geranylger 97.4 0.00041 1.4E-08 72.2 9.5 88 37-146 370-460 (650)
35 2bcg_G Secretory pathway GDP d 97.3 0.00016 5.5E-09 72.1 4.3 61 39-106 236-299 (453)
36 2e1m_A L-glutamate oxidase; L- 96.8 0.0012 4.2E-08 64.3 6.2 78 18-104 292-370 (376)
37 3hdq_A UDP-galactopyranose mut 96.8 0.00053 1.8E-08 67.4 3.4 108 5-148 176-290 (397)
38 3dje_A Fructosyl amine: oxygen 95.8 0.011 3.7E-07 57.9 6.1 59 44-108 160-222 (438)
39 3nyc_A D-arginine dehydrogenas 95.8 0.0073 2.5E-07 57.4 4.7 56 45-107 154-209 (381)
40 3dme_A Conserved exported prot 95.5 0.017 5.7E-07 54.5 5.9 58 44-107 149-209 (369)
41 3ps9_A TRNA 5-methylaminomethy 95.3 0.018 6E-07 60.2 6.1 57 45-107 417-473 (676)
42 3pvc_A TRNA 5-methylaminomethy 95.1 0.022 7.4E-07 59.7 5.9 57 45-107 412-469 (689)
43 3v76_A Flavoprotein; structura 95.0 0.026 9E-07 55.5 5.8 62 39-107 126-187 (417)
44 2uzz_A N-methyl-L-tryptophan o 94.9 0.03 1E-06 53.1 5.7 56 45-107 149-204 (372)
45 1y56_B Sarcosine oxidase; dehy 94.8 0.038 1.3E-06 52.6 6.2 57 44-107 148-205 (382)
46 2i0z_A NAD(FAD)-utilizing dehy 94.5 0.043 1.5E-06 54.2 6.0 59 43-107 132-191 (447)
47 1ryi_A Glycine oxidase; flavop 94.4 0.03 1E-06 53.4 4.6 56 45-107 164-219 (382)
48 2gf3_A MSOX, monomeric sarcosi 94.4 0.041 1.4E-06 52.4 5.5 56 45-107 150-205 (389)
49 2oln_A NIKD protein; flavoprot 94.4 0.044 1.5E-06 52.6 5.6 55 45-106 153-207 (397)
50 2x3n_A Probable FAD-dependent 94.3 0.067 2.3E-06 51.4 6.8 58 44-107 106-166 (399)
51 2ywl_A Thioredoxin reductase r 94.0 0.058 2E-06 45.8 5.0 54 45-106 56-109 (180)
52 3nlc_A Uncharacterized protein 93.9 0.075 2.6E-06 54.3 6.5 58 44-107 219-277 (549)
53 2v3a_A Rubredoxin reductase; a 93.6 0.11 3.8E-06 49.9 6.9 56 45-106 187-242 (384)
54 2gqf_A Hypothetical protein HI 93.4 0.077 2.6E-06 51.7 5.4 58 43-107 107-168 (401)
55 1xdi_A RV3303C-LPDA; reductase 93.1 0.13 4.3E-06 51.5 6.5 54 47-106 225-278 (499)
56 3lxd_A FAD-dependent pyridine 93.1 0.15 5.3E-06 49.4 7.0 56 45-106 194-250 (415)
57 3o0h_A Glutathione reductase; 93.1 0.11 3.9E-06 51.6 6.0 55 46-106 233-287 (484)
58 2xdo_A TETX2 protein; tetracyc 93.0 0.17 5.9E-06 48.6 7.1 56 45-108 128-183 (398)
59 3iwa_A FAD-dependent pyridine 93.0 0.14 4.7E-06 50.7 6.5 56 45-106 202-257 (472)
60 2vou_A 2,6-dihydroxypyridine h 92.7 0.19 6.6E-06 48.3 7.0 58 43-108 97-154 (397)
61 4hb9_A Similarities with proba 92.6 0.21 7.4E-06 47.4 7.2 55 45-107 112-166 (412)
62 2gag_B Heterotetrameric sarcos 92.5 0.13 4.4E-06 49.2 5.4 56 45-107 174-230 (405)
63 3fg2_P Putative rubredoxin red 92.5 0.18 6.2E-06 48.7 6.5 56 45-106 184-240 (404)
64 2zbw_A Thioredoxin reductase; 92.4 0.19 6.5E-06 46.7 6.3 56 45-106 65-120 (335)
65 3oc4_A Oxidoreductase, pyridin 92.3 0.22 7.6E-06 48.9 7.0 55 45-106 189-243 (452)
66 3rp8_A Flavoprotein monooxygen 92.1 0.2 7E-06 48.2 6.3 55 45-107 127-181 (407)
67 1m6i_A Programmed cell death p 92.1 0.24 8.1E-06 49.5 6.9 55 46-106 227-281 (493)
68 2yqu_A 2-oxoglutarate dehydrog 92.0 0.16 5.6E-06 49.9 5.6 56 45-106 208-263 (455)
69 4a9w_A Monooxygenase; baeyer-v 92.0 0.15 5.2E-06 47.4 5.0 56 45-107 76-132 (357)
70 3ab1_A Ferredoxin--NADP reduct 91.8 0.28 9.7E-06 46.2 6.8 57 45-107 74-131 (360)
71 3ef6_A Toluene 1,2-dioxygenase 91.6 0.2 6.7E-06 48.7 5.5 54 47-106 187-240 (410)
72 1mo9_A ORF3; nucleotide bindin 91.5 0.2 6.8E-06 50.4 5.6 55 46-106 256-315 (523)
73 1fec_A Trypanothione reductase 91.2 0.31 1E-05 48.6 6.6 55 46-106 232-287 (490)
74 2wpf_A Trypanothione reductase 91.0 0.35 1.2E-05 48.3 6.7 54 46-105 236-290 (495)
75 3lzw_A Ferredoxin--NADP reduct 90.8 0.39 1.3E-05 44.2 6.5 56 44-106 66-122 (332)
76 2r9z_A Glutathione amide reduc 90.7 0.34 1.2E-05 47.9 6.4 54 46-105 208-262 (463)
77 1pj5_A N,N-dimethylglycine oxi 90.7 0.26 8.8E-06 52.6 5.8 56 45-107 151-207 (830)
78 1ges_A Glutathione reductase; 90.3 0.34 1.2E-05 47.7 5.9 54 46-105 209-263 (450)
79 2qa2_A CABE, polyketide oxygen 90.1 0.31 1.1E-05 48.8 5.5 57 45-107 107-166 (499)
80 3axb_A Putative oxidoreductase 90.1 0.24 8.2E-06 48.3 4.6 58 44-107 180-254 (448)
81 3d1c_A Flavin-containing putat 90.1 0.34 1.2E-05 45.5 5.5 42 63-106 101-142 (369)
82 3c4n_A Uncharacterized protein 90.1 0.12 4.2E-06 50.0 2.4 56 45-107 172-236 (405)
83 4dna_A Probable glutathione re 90.0 0.4 1.4E-05 47.3 6.1 55 45-106 211-267 (463)
84 2gv8_A Monooxygenase; FMO, FAD 89.8 0.27 9.4E-06 48.2 4.8 57 45-107 115-177 (447)
85 2cul_A Glucose-inhibited divis 89.8 0.44 1.5E-05 42.3 5.8 55 46-107 69-125 (232)
86 2qa1_A PGAE, polyketide oxygen 89.7 0.32 1.1E-05 48.8 5.1 57 45-107 106-165 (500)
87 1onf_A GR, grase, glutathione 89.5 0.56 1.9E-05 46.8 6.8 56 45-106 217-274 (500)
88 2hqm_A GR, grase, glutathione 89.5 0.41 1.4E-05 47.4 5.8 54 46-105 227-283 (479)
89 3f8d_A Thioredoxin reductase ( 89.4 0.5 1.7E-05 43.1 6.0 55 45-106 70-124 (323)
90 1k0i_A P-hydroxybenzoate hydro 89.3 0.39 1.3E-05 45.8 5.3 59 45-108 103-164 (394)
91 1y0p_A Fumarate reductase flav 89.2 0.47 1.6E-05 48.2 6.1 56 45-106 255-316 (571)
92 4at0_A 3-ketosteroid-delta4-5a 89.0 0.37 1.2E-05 48.3 5.1 61 42-107 199-264 (510)
93 2cdu_A NADPH oxidase; flavoenz 89.0 0.55 1.9E-05 46.0 6.3 55 45-106 191-246 (452)
94 1fl2_A Alkyl hydroperoxide red 89.0 0.61 2.1E-05 42.7 6.2 57 45-106 56-114 (310)
95 3cgv_A Geranylgeranyl reductas 88.9 0.27 9.4E-06 46.6 3.9 57 45-107 102-162 (397)
96 3nix_A Flavoprotein/dehydrogen 88.7 0.37 1.3E-05 46.3 4.7 57 45-107 106-166 (421)
97 1qo8_A Flavocytochrome C3 fuma 88.5 0.42 1.4E-05 48.6 5.2 58 44-107 249-312 (566)
98 2q0l_A TRXR, thioredoxin reduc 88.4 0.69 2.4E-05 42.3 6.2 54 45-105 59-112 (311)
99 2qae_A Lipoamide, dihydrolipoy 88.2 0.57 2E-05 46.1 5.8 54 47-106 217-275 (468)
100 3ihg_A RDME; flavoenzyme, anth 88.2 0.34 1.2E-05 48.7 4.2 57 45-107 120-183 (535)
101 3lad_A Dihydrolipoamide dehydr 88.0 0.6 2E-05 46.1 5.8 56 45-106 221-279 (476)
102 1d4d_A Flavocytochrome C fumar 88.0 0.61 2.1E-05 47.5 6.0 57 44-106 254-316 (572)
103 2weu_A Tryptophan 5-halogenase 88.0 0.76 2.6E-05 45.7 6.6 56 45-107 173-230 (511)
104 3gwf_A Cyclohexanone monooxyge 87.9 0.5 1.7E-05 47.9 5.2 40 66-106 105-146 (540)
105 2qcu_A Aerobic glycerol-3-phos 87.9 0.52 1.8E-05 47.0 5.3 58 44-107 148-210 (501)
106 1trb_A Thioredoxin reductase; 87.9 0.92 3.1E-05 41.6 6.7 56 45-106 184-246 (320)
107 2e4g_A Tryptophan halogenase; 87.8 0.65 2.2E-05 46.9 6.0 56 45-107 194-252 (550)
108 3alj_A 2-methyl-3-hydroxypyrid 87.7 0.65 2.2E-05 44.1 5.7 54 45-107 107-160 (379)
109 1w4x_A Phenylacetone monooxyge 87.7 0.86 2.9E-05 45.9 6.8 42 65-106 111-153 (542)
110 2eq6_A Pyruvate dehydrogenase 87.6 0.58 2E-05 46.1 5.5 54 46-105 211-269 (464)
111 3vrd_B FCCB subunit, flavocyto 87.5 0.48 1.6E-05 45.4 4.6 59 45-105 198-256 (401)
112 1ojt_A Surface protein; redox- 87.4 0.52 1.8E-05 46.7 5.0 55 46-106 227-285 (482)
113 4ap3_A Steroid monooxygenase; 87.1 1 3.6E-05 45.6 7.1 41 66-106 117-158 (549)
114 1q1r_A Putidaredoxin reductase 87.1 0.89 3.1E-05 44.4 6.4 57 45-106 191-249 (431)
115 1zmd_A Dihydrolipoyl dehydroge 87.1 0.77 2.6E-05 45.3 5.9 56 45-106 220-281 (474)
116 3atr_A Conserved archaeal prot 86.8 0.67 2.3E-05 45.4 5.4 58 45-108 100-163 (453)
117 3fbs_A Oxidoreductase; structu 86.8 1.1 3.8E-05 40.3 6.5 56 44-106 55-111 (297)
118 3ntd_A FAD-dependent pyridine 86.7 0.99 3.4E-05 45.4 6.6 56 46-106 193-266 (565)
119 1zk7_A HGII, reductase, mercur 86.6 0.87 3E-05 44.8 6.0 55 45-106 216-270 (467)
120 3fmw_A Oxygenase; mithramycin, 86.5 0.28 9.7E-06 50.0 2.5 57 45-107 148-207 (570)
121 3e1t_A Halogenase; flavoprotei 85.9 0.82 2.8E-05 45.7 5.5 57 45-107 111-172 (512)
122 2gmh_A Electron transfer flavo 85.5 1.3 4.3E-05 45.3 6.8 58 44-107 143-217 (584)
123 4b1b_A TRXR, thioredoxin reduc 85.5 1.1 3.7E-05 45.5 6.1 56 44-105 262-317 (542)
124 1vdc_A NTR, NADPH dependent th 85.5 0.72 2.4E-05 42.6 4.5 54 45-106 70-123 (333)
125 2a8x_A Dihydrolipoyl dehydroge 85.4 0.89 3E-05 44.7 5.4 55 46-106 213-270 (464)
126 1ebd_A E3BD, dihydrolipoamide 85.2 0.66 2.3E-05 45.5 4.3 55 46-106 212-269 (455)
127 3dgh_A TRXR-1, thioredoxin red 84.6 0.97 3.3E-05 44.7 5.2 55 46-105 228-287 (483)
128 3i3l_A Alkylhalidase CMLS; fla 84.6 1.1 3.8E-05 45.9 5.8 58 45-107 128-188 (591)
129 3h8l_A NADH oxidase; membrane 84.2 0.73 2.5E-05 44.3 4.1 51 45-105 218-268 (409)
130 1dxl_A Dihydrolipoamide dehydr 83.8 0.92 3.2E-05 44.5 4.7 55 46-106 219-278 (470)
131 3itj_A Thioredoxin reductase 1 83.8 1.2 4.1E-05 40.9 5.3 54 45-105 84-140 (338)
132 2gqw_A Ferredoxin reductase; f 83.3 1.7 5.7E-05 42.0 6.2 51 46-106 188-238 (408)
133 3fpz_A Thiazole biosynthetic e 83.3 0.26 8.7E-06 46.1 0.4 40 333-372 282-326 (326)
134 2aqj_A Tryptophan halogenase, 83.2 1.6 5.3E-05 43.9 6.2 56 45-107 165-222 (538)
135 3da1_A Glycerol-3-phosphate de 83.0 0.73 2.5E-05 46.9 3.6 58 44-107 169-232 (561)
136 1hyu_A AHPF, alkyl hydroperoxi 82.8 1.7 5.7E-05 43.6 6.2 57 45-106 267-325 (521)
137 3s5w_A L-ornithine 5-monooxyge 82.8 1.4 4.9E-05 42.9 5.6 43 63-106 329-376 (463)
138 3urh_A Dihydrolipoyl dehydroge 82.7 1.1 3.9E-05 44.3 4.9 55 46-106 240-299 (491)
139 3ics_A Coenzyme A-disulfide re 82.2 1.5 5.2E-05 44.5 5.7 54 45-106 228-281 (588)
140 3klj_A NAD(FAD)-dependent dehy 82.2 1.8 6.1E-05 41.6 5.9 40 63-105 75-114 (385)
141 2xve_A Flavin-containing monoo 82.1 0.86 3E-05 45.0 3.7 56 45-106 101-165 (464)
142 1nhp_A NADH peroxidase; oxidor 81.6 2 6.9E-05 41.8 6.1 54 45-106 191-245 (447)
143 2bc0_A NADH oxidase; flavoprot 81.5 2.3 7.7E-05 42.1 6.5 53 46-106 237-290 (490)
144 3uox_A Otemo; baeyer-villiger 81.3 1.7 5.7E-05 44.0 5.5 42 65-106 104-146 (545)
145 3s5w_A L-ornithine 5-monooxyge 81.1 1.6 5.3E-05 42.6 5.2 44 62-105 139-190 (463)
146 3ic9_A Dihydrolipoamide dehydr 80.8 2.5 8.5E-05 41.9 6.6 55 45-106 215-273 (492)
147 1trb_A Thioredoxin reductase; 79.9 1.9 6.7E-05 39.3 5.1 54 45-106 62-115 (320)
148 3itj_A Thioredoxin reductase 1 79.9 2.9 9.9E-05 38.2 6.3 42 64-106 223-270 (338)
149 3dk9_A Grase, GR, glutathione 79.7 2.1 7.3E-05 42.1 5.6 55 46-106 229-292 (478)
150 2pyx_A Tryptophan halogenase; 79.6 2.6 8.8E-05 42.2 6.2 56 45-107 175-233 (526)
151 2zbw_A Thioredoxin reductase; 79.4 3.2 0.00011 38.1 6.5 56 45-106 191-251 (335)
152 4fk1_A Putative thioredoxin re 79.2 4 0.00014 37.2 7.0 56 45-105 60-115 (304)
153 2bry_A NEDD9 interacting prote 78.9 1.1 3.8E-05 44.7 3.3 59 45-108 166-231 (497)
154 2q7v_A Thioredoxin reductase; 78.6 2.2 7.5E-05 39.2 5.0 55 45-106 65-122 (325)
155 1v59_A Dihydrolipoamide dehydr 78.3 1.9 6.3E-05 42.5 4.7 55 47-106 226-286 (478)
156 2cul_A Glucose-inhibited divis 78.3 2 7E-05 37.8 4.5 36 333-371 197-232 (232)
157 1rp0_A ARA6, thiazole biosynth 78.3 2.4 8.4E-05 38.6 5.2 57 45-106 119-190 (284)
158 2rgh_A Alpha-glycerophosphate 78.2 1.6 5.5E-05 44.4 4.3 57 45-107 188-250 (571)
159 2a87_A TRXR, TR, thioredoxin r 78.1 2.3 7.9E-05 39.4 5.1 54 45-106 71-125 (335)
160 4a9w_A Monooxygenase; baeyer-v 77.9 1.7 6E-05 40.0 4.2 39 333-372 313-353 (357)
161 3d1c_A Flavin-containing putat 77.9 2.6 8.8E-05 39.3 5.4 43 62-105 226-270 (369)
162 2h88_A Succinate dehydrogenase 77.9 3.4 0.00012 42.6 6.7 57 45-107 155-217 (621)
163 3cty_A Thioredoxin reductase; 77.6 3.2 0.00011 38.0 5.8 54 45-106 72-125 (319)
164 3l8k_A Dihydrolipoyl dehydroge 77.4 3.2 0.00011 40.7 6.1 53 45-106 214-271 (466)
165 2zxi_A TRNA uridine 5-carboxym 77.3 3.5 0.00012 42.7 6.4 57 45-107 123-180 (637)
166 3cgb_A Pyridine nucleotide-dis 76.8 3.3 0.00011 40.8 6.1 53 46-106 228-281 (480)
167 3dgz_A Thioredoxin reductase 2 76.1 2.8 9.6E-05 41.4 5.3 57 45-106 225-286 (488)
168 1kf6_A Fumarate reductase flav 75.9 3.9 0.00013 41.9 6.4 57 45-107 134-197 (602)
169 1y56_A Hypothetical protein PH 75.8 3.6 0.00012 40.8 6.0 57 40-106 256-312 (493)
170 3h28_A Sulfide-quinone reducta 75.7 1.9 6.4E-05 41.8 3.8 53 45-105 200-254 (430)
171 3c96_A Flavin-containing monoo 75.0 1.8 6.1E-05 41.6 3.4 57 46-108 108-170 (410)
172 2wdq_A Succinate dehydrogenase 74.5 3.5 0.00012 42.0 5.7 57 45-106 143-205 (588)
173 3r9u_A Thioredoxin reductase; 74.3 3.2 0.00011 37.5 4.9 44 62-106 195-243 (315)
174 3ces_A MNMG, tRNA uridine 5-ca 73.7 3.7 0.00013 42.6 5.5 56 46-107 125-181 (651)
175 3fbs_A Oxidoreductase; structu 73.3 2.5 8.5E-05 37.9 3.8 36 333-370 256-291 (297)
176 3f8d_A Thioredoxin reductase ( 73.3 4.2 0.00014 36.8 5.4 42 63-105 203-249 (323)
177 2bs2_A Quinol-fumarate reducta 72.6 3.8 0.00013 42.5 5.4 56 45-106 158-219 (660)
178 4g6h_A Rotenone-insensitive NA 72.3 2.8 9.7E-05 41.8 4.2 55 45-105 272-330 (502)
179 1lvl_A Dihydrolipoamide dehydr 71.8 2.9 9.8E-05 41.0 4.1 53 46-106 213-267 (458)
180 2r0c_A REBC; flavin adenine di 71.2 3.5 0.00012 41.5 4.7 54 45-107 138-196 (549)
181 3lzw_A Ferredoxin--NADP reduct 71.2 3.3 0.00011 37.7 4.2 44 62-106 201-249 (332)
182 2q0l_A TRXR, thioredoxin reduc 71.0 5.7 0.00019 36.0 5.7 42 63-105 192-239 (311)
183 3ab1_A Ferredoxin--NADP reduct 69.8 6.1 0.00021 36.8 5.8 43 62-105 214-261 (360)
184 3hyw_A Sulfide-quinone reducta 68.5 4.1 0.00014 39.5 4.3 42 62-106 212-255 (430)
185 3cp8_A TRNA uridine 5-carboxym 68.4 5.4 0.00018 41.3 5.3 56 46-107 118-174 (641)
186 4gcm_A TRXR, thioredoxin reduc 68.1 4 0.00014 37.2 4.0 37 333-370 269-305 (312)
187 3kd9_A Coenzyme A disulfide re 67.5 7.4 0.00025 37.7 6.0 53 46-106 191-243 (449)
188 3cty_A Thioredoxin reductase; 67.2 6.2 0.00021 36.0 5.1 42 63-105 203-250 (319)
189 2q7v_A Thioredoxin reductase; 66.7 8.7 0.0003 35.1 6.0 42 63-105 201-247 (325)
190 2dkh_A 3-hydroxybenzoate hydro 65.5 4 0.00014 42.0 3.7 57 45-107 141-211 (639)
191 1q1r_A Putidaredoxin reductase 64.8 8.3 0.00028 37.3 5.7 40 64-106 74-113 (431)
192 3r9u_A Thioredoxin reductase; 64.7 7.9 0.00027 34.8 5.3 52 45-105 62-116 (315)
193 3cgb_A Pyridine nucleotide-dis 64.6 8.5 0.00029 37.8 5.8 41 64-105 107-150 (480)
194 4b63_A L-ornithine N5 monooxyg 63.9 6.4 0.00022 39.1 4.8 41 65-105 160-212 (501)
195 2gqw_A Ferredoxin reductase; f 63.8 9.7 0.00033 36.5 6.0 41 62-105 71-111 (408)
196 2e5v_A L-aspartate oxidase; ar 62.8 3.4 0.00012 40.8 2.5 55 45-107 119-176 (472)
197 3ef6_A Toluene 1,2-dioxygenase 62.4 10 0.00035 36.3 5.8 41 63-106 70-110 (410)
198 2bc0_A NADH oxidase; flavoprot 62.1 6.9 0.00024 38.6 4.6 42 63-105 105-147 (490)
199 4eqs_A Coenzyme A disulfide re 62.0 5.1 0.00017 39.0 3.6 39 62-105 200-238 (437)
200 1vdc_A NTR, NADPH dependent th 61.6 11 0.00039 34.2 5.8 44 62-106 207-258 (333)
201 1m6i_A Programmed cell death p 61.6 6.3 0.00022 39.0 4.2 41 62-105 102-142 (493)
202 1fl2_A Alkyl hydroperoxide red 61.1 11 0.00036 34.1 5.4 42 63-105 193-240 (310)
203 3h8l_A NADH oxidase; membrane 59.8 9.5 0.00033 36.3 5.1 38 333-370 298-335 (409)
204 3sx6_A Sulfide-quinone reducta 58.8 5 0.00017 38.9 2.9 52 46-105 209-267 (437)
205 1xhc_A NADH oxidase /nitrite r 58.7 6.7 0.00023 37.1 3.7 49 46-105 184-232 (367)
206 3hyw_A Sulfide-quinone reducta 58.2 11 0.00037 36.4 5.2 41 62-106 68-108 (430)
207 3ntd_A FAD-dependent pyridine 56.8 11 0.00036 37.7 5.0 41 64-105 72-115 (565)
208 3ics_A Coenzyme A-disulfide re 56.7 19 0.00066 36.2 6.9 41 64-105 107-150 (588)
209 3k30_A Histamine dehydrogenase 56.7 4.3 0.00015 42.1 2.1 42 62-106 579-623 (690)
210 3iwa_A FAD-dependent pyridine 56.6 13 0.00045 36.2 5.5 42 63-105 79-123 (472)
211 1nhp_A NADH peroxidase; oxidor 56.1 15 0.0005 35.5 5.8 41 64-105 70-113 (447)
212 1chu_A Protein (L-aspartate ox 55.8 4.8 0.00016 40.5 2.2 58 46-107 139-208 (540)
213 2vdc_G Glutamate synthase [NAD 55.8 8.2 0.00028 37.9 3.9 36 333-370 408-443 (456)
214 2i0z_A NAD(FAD)-utilizing dehy 55.2 8.6 0.00029 37.4 3.9 37 335-371 405-444 (447)
215 3oc4_A Oxidoreductase, pyridin 55.1 10 0.00035 36.8 4.4 42 63-105 71-113 (452)
216 2a87_A TRXR, TR, thioredoxin r 55.0 9.4 0.00032 35.1 4.0 37 333-370 279-315 (335)
217 1xhc_A NADH oxidase /nitrite r 54.9 12 0.00041 35.3 4.8 38 64-105 74-111 (367)
218 4a5l_A Thioredoxin reductase; 53.0 11 0.00037 34.1 4.0 54 45-105 66-119 (314)
219 1ebd_A E3BD, dihydrolipoamide 50.3 16 0.00056 35.3 5.1 41 62-106 103-144 (455)
220 4fk1_A Putative thioredoxin re 49.9 8.3 0.00028 35.0 2.7 38 332-370 262-299 (304)
221 3sx6_A Sulfide-quinone reducta 49.5 16 0.00054 35.2 4.8 41 62-106 71-111 (437)
222 4a5l_A Thioredoxin reductase; 49.4 25 0.00084 31.6 5.8 38 333-371 275-312 (314)
223 3lxd_A FAD-dependent pyridine 49.3 18 0.00061 34.5 5.0 40 63-105 78-117 (415)
224 2gqf_A Hypothetical protein HI 48.7 12 0.00039 36.1 3.6 35 334-368 363-400 (401)
225 3h28_A Sulfide-quinone reducta 48.6 13 0.00045 35.7 4.0 41 62-106 68-108 (430)
226 2cdu_A NADPH oxidase; flavoenz 48.1 16 0.00055 35.3 4.6 41 64-105 72-115 (452)
227 3kd9_A Coenzyme A disulfide re 48.0 24 0.00081 34.1 5.8 41 62-105 71-112 (449)
228 2ywl_A Thioredoxin reductase r 47.8 16 0.00054 30.1 3.9 35 335-370 136-170 (180)
229 3qfa_A Thioredoxin reductase 1 47.3 20 0.00068 35.6 5.2 57 45-106 250-314 (519)
230 2x8g_A Thioredoxin glutathione 44.4 32 0.0011 34.6 6.2 56 46-106 327-394 (598)
231 1ps9_A 2,4-dienoyl-COA reducta 43.8 20 0.00067 36.9 4.6 41 62-106 585-627 (671)
232 2a8x_A Dihydrolipoyl dehydroge 42.4 17 0.0006 35.2 3.8 40 63-106 104-145 (464)
233 1jnr_A Adenylylsulfate reducta 41.7 24 0.00081 36.2 4.8 42 64-106 166-217 (643)
234 3fg2_P Putative rubredoxin red 40.2 36 0.0012 32.2 5.6 38 64-105 71-108 (404)
235 3oz2_A Digeranylgeranylglycero 39.9 19 0.00063 33.3 3.4 57 45-107 102-162 (397)
236 1rp0_A ARA6, thiazole biosynth 38.8 11 0.00036 34.2 1.5 39 335-373 234-277 (284)
237 1dxl_A Dihydrolipoamide dehydr 38.7 23 0.00077 34.4 4.0 40 63-106 109-150 (470)
238 3oz2_A Digeranylgeranylglycero 38.1 16 0.00054 33.8 2.6 35 336-370 278-315 (397)
239 3v76_A Flavoprotein; structura 36.7 17 0.00059 35.1 2.7 32 334-365 382-416 (417)
240 3vrd_B FCCB subunit, flavocyto 36.1 28 0.00096 32.7 4.1 38 333-370 285-323 (401)
241 1v59_A Dihydrolipoamide dehydr 35.4 26 0.0009 34.0 3.9 34 333-368 316-349 (478)
242 1y56_A Hypothetical protein PH 35.1 39 0.0013 33.2 5.1 55 44-105 160-217 (493)
243 1hyu_A AHPF, alkyl hydroperoxi 34.8 28 0.00096 34.5 4.0 37 333-370 479-515 (521)
244 4eqs_A Coenzyme A disulfide re 34.0 48 0.0016 31.9 5.4 42 64-106 71-115 (437)
245 3l8k_A Dihydrolipoyl dehydroge 33.8 40 0.0014 32.7 4.9 35 333-369 299-333 (466)
246 3klj_A NAD(FAD)-dependent dehy 33.5 27 0.00092 33.2 3.5 37 333-369 256-294 (385)
247 3dgh_A TRXR-1, thioredoxin red 33.4 40 0.0014 32.8 4.8 36 333-369 317-352 (483)
248 3dgz_A Thioredoxin reductase 2 32.8 42 0.0014 32.7 4.8 36 333-369 317-352 (488)
249 4dna_A Probable glutathione re 32.3 42 0.0014 32.4 4.7 35 333-369 297-331 (463)
250 3gyx_A Adenylylsulfate reducta 31.9 26 0.00089 36.2 3.2 42 64-106 182-232 (662)
251 3qfa_A Thioredoxin reductase 1 31.6 46 0.0016 32.9 4.9 36 333-369 345-380 (519)
252 1pn0_A Phenol 2-monooxygenase; 30.6 31 0.0011 35.5 3.5 34 336-369 352-388 (665)
253 3gwf_A Cyclohexanone monooxyge 30.4 44 0.0015 33.4 4.6 39 65-108 345-385 (540)
254 3o0h_A Glutathione reductase; 30.3 43 0.0015 32.6 4.4 35 333-369 317-351 (484)
255 1n4w_A CHOD, cholesterol oxida 30.0 51 0.0017 32.4 4.9 41 65-106 237-287 (504)
256 2v3a_A Rubredoxin reductase; a 29.8 64 0.0022 30.1 5.4 38 64-105 74-111 (384)
257 3dk9_A Grase, GR, glutathione 29.0 45 0.0015 32.3 4.3 35 333-369 322-356 (478)
258 3lad_A Dihydrolipoamide dehydr 28.9 54 0.0018 31.7 4.9 35 333-369 309-343 (476)
259 3uox_A Otemo; baeyer-villiger 28.6 72 0.0025 31.8 5.8 39 64-108 352-392 (545)
260 1coy_A Cholesterol oxidase; ox 28.4 56 0.0019 32.2 4.9 41 65-106 242-292 (507)
261 3urh_A Dihydrolipoyl dehydroge 28.3 51 0.0017 32.1 4.5 35 333-369 329-363 (491)
262 3ic9_A Dihydrolipoamide dehydr 28.1 49 0.0017 32.4 4.4 34 333-368 304-337 (492)
263 1gte_A Dihydropyrimidine dehyd 28.0 38 0.0013 36.8 3.8 36 333-370 472-507 (1025)
264 4g6h_A Rotenone-insensitive NA 27.6 47 0.0016 32.8 4.2 37 333-369 363-399 (502)
265 1xdi_A RV3303C-LPDA; reductase 26.8 44 0.0015 32.7 3.8 35 333-369 308-342 (499)
266 3k30_A Histamine dehydrogenase 26.7 42 0.0014 34.5 3.8 34 334-370 641-674 (690)
267 1ojt_A Surface protein; redox- 26.6 30 0.001 33.7 2.5 34 333-368 315-348 (482)
268 1o94_A Tmadh, trimethylamine d 26.4 30 0.001 36.0 2.6 42 62-106 583-645 (729)
269 2x8g_A Thioredoxin glutathione 26.3 66 0.0023 32.2 5.1 37 332-369 423-459 (598)
270 1cjc_A Protein (adrenodoxin re 26.1 55 0.0019 31.8 4.3 42 63-105 270-331 (460)
271 1lqt_A FPRA; NADP+ derivative, 25.5 57 0.0019 31.7 4.3 42 63-105 265-324 (456)
272 2qae_A Lipoamide, dihydrolipoy 25.5 56 0.0019 31.5 4.3 35 333-368 305-339 (468)
273 1ges_A Glutathione reductase; 25.3 69 0.0024 30.8 4.9 34 333-368 294-327 (450)
274 2hqm_A GR, grase, glutathione 25.3 57 0.002 31.7 4.3 34 333-368 313-346 (479)
275 1zmd_A Dihydrolipoyl dehydroge 25.2 55 0.0019 31.7 4.1 35 333-369 311-345 (474)
276 1kdg_A CDH, cellobiose dehydro 24.7 87 0.003 30.9 5.6 41 333-373 504-546 (546)
277 1ju2_A HydroxynitrIle lyase; f 24.4 99 0.0034 30.6 5.9 43 62-105 206-259 (536)
278 2gag_A Heterotetrameric sarcos 24.1 52 0.0018 35.5 4.0 43 62-105 328-381 (965)
279 3pl8_A Pyranose 2-oxidase; sub 22.8 62 0.0021 33.0 4.1 40 333-372 574-615 (623)
280 1zk7_A HGII, reductase, mercur 22.7 65 0.0022 31.1 4.1 34 333-368 300-333 (467)
281 1o94_A Tmadh, trimethylamine d 22.4 45 0.0016 34.6 3.0 36 333-371 665-700 (729)
282 2bcg_G Secretory pathway GDP d 22.1 61 0.0021 31.2 3.7 29 336-367 410-438 (453)
283 3jsk_A Cypbp37 protein; octame 21.9 94 0.0032 29.2 4.9 30 45-78 160-189 (344)
284 2wpf_A Trypanothione reductase 21.7 85 0.0029 30.7 4.7 34 333-368 321-354 (495)
285 1fec_A Trypanothione reductase 21.5 86 0.0029 30.6 4.7 34 333-368 317-350 (490)
286 2eq6_A Pyruvate dehydrogenase 21.5 71 0.0024 30.8 4.1 34 333-368 300-333 (464)
287 2r9z_A Glutathione amide reduc 21.0 88 0.003 30.2 4.7 34 333-368 293-326 (463)
288 2gjc_A Thiazole biosynthetic e 21.0 42 0.0014 31.4 2.2 39 334-372 283-326 (326)
289 1mo9_A ORF3; nucleotide bindin 20.9 73 0.0025 31.4 4.1 34 333-368 344-377 (523)
290 2jbv_A Choline oxidase; alcoho 20.8 1.1E+02 0.0037 30.4 5.4 43 62-105 221-271 (546)
291 2yqu_A 2-oxoglutarate dehydrog 20.5 83 0.0028 30.1 4.3 34 333-368 293-326 (455)
292 1lvl_A Dihydrolipoamide dehydr 20.0 79 0.0027 30.4 4.1 34 333-368 296-329 (458)
No 1
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=100.00 E-value=5.2e-37 Score=323.35 Aligned_cols=273 Identities=26% Similarity=0.436 Sum_probs=217.2
Q ss_pred CCchhhcchhhhhhhh--ccCCcceeeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCC-
Q psy7654 14 SDSWFETSAKRYNSFV--THEGCEDTVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCAD- 90 (373)
Q Consensus 14 g~~~~~~S~~~~~~~~--~~~g~~~~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~- 90 (373)
+.+++++|++.+..+. .+.|.... ++|||++|+++|++.+ +|++|++|++|++ ++++|.|++.+
T Consensus 370 ~~~l~~ls~~~~~~~~~~~~~g~~~~--~~gG~~~l~~~La~~l----------~I~l~~~V~~I~~-~~~~v~V~~~~~ 436 (662)
T 2z3y_A 370 ATPLSTLSLKHWDQDDDFEFTGSHLT--VRNGYSCVPVALAEGL----------DIKLNTAVRQVRY-TASGCEVIAVNT 436 (662)
T ss_dssp TSCGGGBBTTTTTTTGGGCCBSCCEE--ETTCTTHHHHHHTTTC----------EEETTEEEEEEEE-ETTEEEEEEEES
T ss_pred CCChhhcCHhhcCCCcccccCCceee--ecCcHHHHHHHHHhcC----------ceecCCeEEEEEE-CCCcEEEEEeec
Confidence 6688899988765432 23454433 4899999999998754 6999999999999 78889888765
Q ss_pred -----CcEEEcCEEEEcCCcccccc--cccccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCCCC
Q psy7654 91 -----GSQYSADKVLITVSLGVFKS--DLITFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHDDK 163 (373)
Q Consensus 91 -----G~~~~ad~VIvtiP~~~l~~--~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~~~ 163 (373)
|++++||+||+|+|+.++++ ..|.|.|+||..+.++|++++|+++.||+|.|+++||+.+...++.+.+...
T Consensus 437 ~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~- 515 (662)
T 2z3y_A 437 RSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTA- 515 (662)
T ss_dssp SCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSST-
T ss_pred ccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCCCCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCC-
Confidence 56799999999999999987 2367999999999999999999999999999999999876555554421100
Q ss_pred CCCCcccccccCCCCccccccccccceeecCCCCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeecCC
Q psy7654 164 KNPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLTTE 243 (373)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~~~ 243 (373)
..+. ...+++. .
T Consensus 516 ---------------------------------------~~~~-------------------------~~~~~~~---~- 527 (662)
T 2z3y_A 516 ---------------------------------------SRGE-------------------------LFLFWNL---Y- 527 (662)
T ss_dssp ---------------------------------------TTTE-------------------------EEEEECC---S-
T ss_pred ---------------------------------------CCCc-------------------------eeEEEeC---C-
Confidence 0010 0011111 1
Q ss_pred CCceEEEEecchhhHHhhcCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEeccCCCCCccccccccccccCCccccchHh
Q psy7654 244 DPLTFLGWISGASARFMETLSDEQIKTESMKAFRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASRHD 323 (373)
Q Consensus 244 ~~~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~~~ 323 (373)
+.++|++|++|..+..+..++++++++.++++|+++||.. ..++|..+.+++|.+|||++|+|+++.||+.. ..++.
T Consensus 528 ~~~vL~~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~-~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~--~~~~~ 604 (662)
T 2z3y_A 528 KAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSS-AVPQPKETVVSRWRADPWARGSYSYVAAGSSG--NDYDL 604 (662)
T ss_dssp SSSEEEEEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTT-SSCCCSEEEECCTTTCTTTSSSCEECBTTCCT--HHHHH
T ss_pred CCCEEEEEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCc-ccCCCceeEEEEECCCCCCCcccccCCCCCch--hhHHH
Confidence 2358999999999999999999999999999999999952 35689999999999999999999999999754 34677
Q ss_pred hcccccC-------CCCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhCC
Q psy7654 324 LEAPLSN-------GQGKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSDP 371 (373)
Q Consensus 324 l~~p~~~-------~~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~~ 371 (373)
+.+|+.+ .+..+|||||||+|+..++||||||++||+|||++|++.+.
T Consensus 605 l~~p~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 605 MAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp HHCCBCC---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred HhCcCccccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHcc
Confidence 8888742 12235899999999988899999999999999999998654
No 2
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=100.00 E-value=5.9e-36 Score=321.51 Aligned_cols=272 Identities=27% Similarity=0.462 Sum_probs=216.6
Q ss_pred CCchhhcchhhhhhhh--ccCCcceeeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCC-
Q psy7654 14 SDSWFETSAKRYNSFV--THEGCEDTVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCAD- 90 (373)
Q Consensus 14 g~~~~~~S~~~~~~~~--~~~g~~~~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~- 90 (373)
+.+++.+|+..+..+. .+.|.... ++|||++|+++|++.+ +|++|++|++|.+ ++++|.|++.+
T Consensus 541 ~~~l~~lSl~~~~~~~~~~~~g~~~~--~~gG~~~L~~aLa~~l----------~I~Lnt~V~~I~~-~~~gV~V~~~~~ 607 (852)
T 2xag_A 541 ATPLSTLSLKHWDQDDDFEFTGSHLT--VRNGYSCVPVALAEGL----------DIKLNTAVRQVRY-TASGCEVIAVNT 607 (852)
T ss_dssp TSCTTTBBTTTTTGGGGGCCBSCCEE--ETTCTTHHHHHHTTTC----------CEECSEEEEEEEE-ETTEEEEEEEES
T ss_pred cCChHhhhhhhhhhccccccCCceEE--ecCcHHHHHHHHHhCC----------CEEeCCeEEEEEE-cCCcEEEEEeec
Confidence 5678888888765432 23454433 4899999999999865 4999999999999 78889888754
Q ss_pred -----CcEEEcCEEEEcCCcccccc--cccccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCCCC
Q psy7654 91 -----GSQYSADKVLITVSLGVFKS--DLITFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHDDK 163 (373)
Q Consensus 91 -----G~~~~ad~VIvtiP~~~l~~--~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~~~ 163 (373)
|+++.||+||||+|+.++++ ..|.|.|+||..+.++|++++|+++.||+|.|+++||+.+...++++.+...
T Consensus 608 ~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~- 686 (852)
T 2xag_A 608 RSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTA- 686 (852)
T ss_dssp SSTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSST-
T ss_pred ccCCCCeEEECCEEEECCCHHHHHhhhcccccCCCCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccC-
Confidence 56799999999999999987 2367999999999999999999999999999999999875555655422110
Q ss_pred CCCCcccccccCCCCccccccccccceeecCCCCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeecCC
Q psy7654 164 KNPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLTTE 243 (373)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~~~ 243 (373)
..+... ..| +.+
T Consensus 687 ---------------------------------------~~~~l~--------------------~~~-----~~~---- 698 (852)
T 2xag_A 687 ---------------------------------------SRGELF--------------------LFW-----NLY---- 698 (852)
T ss_dssp ---------------------------------------TTTTTC--------------------EEE-----ECS----
T ss_pred ---------------------------------------CCCceE--------------------EEe-----cCC----
Confidence 001000 011 111
Q ss_pred CCceEEEEecchhhHHhhcCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEeccCCCCCccccccccccccCCccccchHh
Q psy7654 244 DPLTFLGWISGASARFMETLSDEQIKTESMKAFRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASRHD 323 (373)
Q Consensus 244 ~~~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~~~ 323 (373)
+.++|++|++|..+..+..++++++++.++++|+++||.. ..++|..+.+++|.+|||++|+|+++.||+.. ..++.
T Consensus 699 ~~pvLl~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~-~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~--~~~~~ 775 (852)
T 2xag_A 699 KAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSS-AVPQPKETVVSRWRADPWARGSYSYVAAGSSG--NDYDL 775 (852)
T ss_dssp SSSEEEEEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTT-TCCCCSEEEECCTTTCTTTSSSCEECBTTCCT--THHHH
T ss_pred CCCEEEEEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCcc-ccCCceEEEEEecCCCCCcCccccccCCCcch--hhHHH
Confidence 2348899999999999999999999999999999999952 35689999999999999999999999999754 35677
Q ss_pred hcccccC-------CCCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhC
Q psy7654 324 LEAPLSN-------GQGKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 324 l~~p~~~-------~~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~ 370 (373)
|.+|+.+ .+..+|||||||+|+..++||||||++||+|||.+|++.+
T Consensus 776 L~~P~~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l 829 (852)
T 2xag_A 776 MAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQF 829 (852)
T ss_dssp TTSCBCCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HhCccccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHh
Confidence 8888742 1233589999999998889999999999999999999864
No 3
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=9e-34 Score=289.91 Aligned_cols=303 Identities=22% Similarity=0.315 Sum_probs=204.5
Q ss_pred CCchhhcchhhhhhhhccCCcceeeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcE
Q psy7654 14 SDSWFETSAKRYNSFVTHEGCEDTVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQ 93 (373)
Q Consensus 14 g~~~~~~S~~~~~~~~~~~g~~~~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~ 93 (373)
|.+++++|+..++.. ..|... +.+| +++|+++|++.+.+ ++|++|++|++|.+.++++|.|++.+|++
T Consensus 176 g~~~~~~s~~~~~~~--~~~~~~--~~~g-~~~l~~~l~~~l~~-------~~i~~~~~V~~I~~~~~~~v~v~~~~g~~ 243 (516)
T 1rsg_A 176 GLDWKLLSAKDTYFG--HQGRNA--FALN-YDSVVQRIAQSFPQ-------NWLKLSCEVKSITREPSKNVTVNCEDGTV 243 (516)
T ss_dssp TBCTTTSBHHHHCCC--CSSCCE--EESC-HHHHHHHHHTTSCG-------GGEETTCCEEEEEECTTSCEEEEETTSCE
T ss_pred CCChHHCChHHHHhh--ccCcch--hhhC-HHHHHHHHHHhCCC-------CEEEECCEEEEEEEcCCCeEEEEECCCcE
Confidence 667888998876432 334332 3467 99999999998862 57999999999998336679999999988
Q ss_pred EEcCEEEEcCCccccccc---------ccccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCCCCC
Q psy7654 94 YSADKVLITVSLGVFKSD---------LITFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHDDKK 164 (373)
Q Consensus 94 ~~ad~VIvtiP~~~l~~~---------~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~~~~ 164 (373)
+.||+||+|+|+.+++.. .|.|.|+||..+.++++++.|+++.||++.|+++||+++...+..+.+.++.
T Consensus 244 ~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~~~- 322 (516)
T 1rsg_A 244 YNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNESSKIVTLANSTNE- 322 (516)
T ss_dssp EEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCSCSEEEECCCCCHH-
T ss_pred EECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCCCCcEEEeCCCCcc-
Confidence 999999999999999642 3789999999999999999999999999999999999764444333211100
Q ss_pred CCCcccccccCCCCccccccccccceeecCCCCCCCCCCCCCCccccCCCCCCcccccccccCCCccee--eeeeeeecC
Q psy7654 165 NPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIV--DLYGFYLTT 242 (373)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~--~~~~~~~~~ 242 (373)
+ | ...-++..+-|. ..|........ + ..+..|.. .++++....
T Consensus 323 --~----------~--~~~~~~~~~~~~----~~~~~~~~~~~-------~----------~~~~~~~~~~~~~~~~~~~ 367 (516)
T 1rsg_A 323 --F----------V--EIVRNAENLDEL----DSMLEREDSQK-------H----------TSVTCWSQPLFFVNLSKST 367 (516)
T ss_dssp --H----------H--HHHHHCCSHHHH----HHHC--------------------------CCCTTSSCEEEEEHHHHT
T ss_pred --c----------h--hhcccCcccchh----hhccccccccc-------c----------cccccccCceeEEEeeecC
Confidence 0 0 000000000000 00000000000 0 00012221 122323223
Q ss_pred CCCceEEEEecchhhHHhhcC--CHHHHHHH---HHHHHHHHhCC-----CCCCC-------CCc--eEEeccCCCCCcc
Q psy7654 243 EDPLTFLGWISGASARFMETL--SDEQIKTE---SMKAFRFFLGA-----NYTIP-------EPS--RVFHSSWGTNKHF 303 (373)
Q Consensus 243 ~~~~~L~~~~~g~~a~~~~~l--s~e~~~~~---~~~~L~~~~g~-----~~~~~-------~~~--~~~~~~W~~dp~~ 303 (373)
+.++|++|++|+.|..++.+ +++++++. ++++|.++||. +...+ .|. .+.+++|..|||+
T Consensus 368 -~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~ 446 (516)
T 1rsg_A 368 -GVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYS 446 (516)
T ss_dssp -SCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTT
T ss_pred -CCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCC
Confidence 34689999999999999998 89888654 66666666762 11111 254 8899999999999
Q ss_pred ccccccccccCCccccchHhhcccccCCCCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhCC
Q psy7654 304 KGSYSIYTLTTDKMNASRHDLEAPLSNGQGKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSDP 371 (373)
Q Consensus 304 ~G~~~~~~~g~~~~~~~~~~l~~p~~~~~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~~ 371 (373)
+|+|+++.||+... ...+.+.++.. +|||||||+|+..++||||||++||+|||.+|++.+.
T Consensus 447 ~Gsys~~~~g~~~~-~~~~~l~~~~~-----~rl~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~ 508 (516)
T 1rsg_A 447 RGAYSACFPGDDPV-DMVVAMSNGQD-----SRIRFAGEHTIMDGAGCAYGAWESGRREATRISDLLK 508 (516)
T ss_dssp TTCCCCCBC----C-HHHHHHHHCSS-----SSEEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCcCCCCCHH-HHHHHhccCCC-----CcEEEeccccccCCCccchhHHHHHHHHHHHHHHHhh
Confidence 99999999987421 12445554322 3899999999988899999999999999999998653
No 4
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=6.8e-34 Score=303.43 Aligned_cols=273 Identities=27% Similarity=0.480 Sum_probs=216.2
Q ss_pred ccCCchhhcchhhhhh---hhccCCcceeeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEe
Q psy7654 12 DASDSWFETSAKRYNS---FVTHEGCEDTVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTC 88 (373)
Q Consensus 12 ~~g~~~~~~S~~~~~~---~~~~~g~~~~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~ 88 (373)
..|..++++|+..+.. |..++|...+ .++|++.|+++|++.+ +|++|++|++|++ ++++|.|++
T Consensus 500 ~~G~~l~~ls~~~~~~~~~~~~~~G~~~~--~~~G~~~l~~aLa~gl----------~I~l~t~V~~I~~-~~~~v~V~~ 566 (776)
T 4gut_A 500 ACGSNLHQVSARSWDHNEFFAQFAGDHTL--LTPGYSVIIEKLAEGL----------DIQLKSPVQCIDY-SGDEVQVTT 566 (776)
T ss_dssp HHTSCTTSBBTTTTTGGGGSCCCCSCEEE--CTTCTHHHHHHHHTTS----------CEESSCCEEEEEC-SSSSEEEEE
T ss_pred hcCCChHHcChhhhhhhhhHHhcCCCeEE--ECChHHHHHHHHHhCC----------cEEcCCeeEEEEE-cCCEEEEEE
Confidence 3467788888877543 2234455433 4899999999998755 5999999999999 788899999
Q ss_pred CCCcEEEcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCCCCCCCCc
Q psy7654 89 ADGSQYSADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHDDKKNPLF 168 (373)
Q Consensus 89 ~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~~~~~~~~ 168 (373)
.+|+++.||+||+|+|+.+++...|.|.|+||..+.++++++.|+++.||++.|+++||++...+..+++.-...
T Consensus 567 ~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~----- 641 (776)
T 4gut_A 567 TDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPS----- 641 (776)
T ss_dssp TTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSS-----
T ss_pred CCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCC-----
Confidence 999899999999999999997655789999999999999999999999999999999998642222221100000
Q ss_pred ccccccCCCCccccccccccceeecCCCCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeecCCCCceE
Q psy7654 169 KDTAVVDGAPWISLFLGTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLTTEDPLTF 248 (373)
Q Consensus 169 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~~~~~~~L 248 (373)
... ..+...+++... .+...+|
T Consensus 642 ----------------------------------~~~-----------------------~~~~~~~~d~~p-~g~~~vL 663 (776)
T 4gut_A 642 ----------------------------------ASK-----------------------RGLFAVFYDMDP-QKKHSVL 663 (776)
T ss_dssp ----------------------------------GGG-----------------------TTEEEEEEESCT-TSCSCEE
T ss_pred ----------------------------------cCC-----------------------CceEEEEecCCC-CCCceEE
Confidence 000 011112233221 2334689
Q ss_pred EEEecchhhHHhhcCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEeccCCCCCccccccccccccCCccccchHhhcccc
Q psy7654 249 LGWISGASARFMETLSDEQIKTESMKAFRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASRHDLEAPL 328 (373)
Q Consensus 249 ~~~~~g~~a~~~~~ls~e~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~~~l~~p~ 328 (373)
++|++|+.+..+..++++++++.++++|+++||. ...+.|..+.+++|.+|||++|+|+...||+.. ..++.|.+|+
T Consensus 664 ~~~i~G~~a~~l~~lsdeel~~~~l~~L~~ifg~-~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~--~~~~~L~~p~ 740 (776)
T 4gut_A 664 MSVIAGEAVASVRTLDDKQVLQQCMATLRELFKE-QEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSG--EAYDIIAEDI 740 (776)
T ss_dssp EEEECTHHHHHHHTSCHHHHHHHHHHHHHHHTTT-SCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCT--HHHHHHHCCB
T ss_pred EEEecchhHHHHHcCCHHHHHHHHHHHHHHHhCc-ccccCcceEEEecCCCCCccCCCCCccCCCCch--hHHHHHhCcC
Confidence 9999999999999999999999999999999995 246789999999999999999999998888643 3567788886
Q ss_pred cCCCCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHh
Q psy7654 329 SNGQGKQVLLFAGEASNEHQYGTVNGAVETGWREADRILK 368 (373)
Q Consensus 329 ~~~~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~ 368 (373)
.+ |||||||+|+..++||||||++||+|||++|++
T Consensus 741 ~g-----rL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 741 QG-----TVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp TT-----TEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred CC-----cEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 42 899999999988899999999999999999985
No 5
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=8.8e-33 Score=282.56 Aligned_cols=276 Identities=22% Similarity=0.317 Sum_probs=215.6
Q ss_pred hhhhccCCchhhcchhhhhhhhccCCc----------ceeeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEE
Q psy7654 8 QNSLDASDSWFETSAKRYNSFVTHEGC----------EDTVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKIN 77 (373)
Q Consensus 8 ~~~~~~g~~~~~~S~~~~~~~~~~~g~----------~~~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~ 77 (373)
.+....|.+.+++|+..++.++...|. .....++||+++|+++|++.+. ++|++|++|++|.
T Consensus 168 ~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg--------~~i~~~~~V~~i~ 239 (520)
T 1s3e_A 168 FVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLG--------DRVKLERPVIYID 239 (520)
T ss_dssp HHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHHHG--------GGEESSCCEEEEE
T ss_pred HHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHHcC--------CcEEcCCeeEEEE
Confidence 344445778999999998776543221 1112348999999999999774 7899999999999
Q ss_pred ecCCCcEEEEeCCCcEEEcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCce-eE
Q psy7654 78 WEDANGVLVTCADGSQYSADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGY-NF 156 (373)
Q Consensus 78 ~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~-~~ 156 (373)
. ++++|.|++.+|+++.||+||+|+|+.++.+ |.|+|.||..+.+++++++|+++.|+++.|+++||++. ++ +.
T Consensus 240 ~-~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~--~~~g~ 314 (520)
T 1s3e_A 240 Q-TRENVLVETLNHEMYEAKYVISAIPPTLGMK--IHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKK--DYCGT 314 (520)
T ss_dssp C-SSSSEEEEETTSCEEEESEEEECSCGGGGGG--SEEESCCCHHHHHHTTSCCBCCEEEEEEECSSCGGGGG--TEEEE
T ss_pred E-CCCeEEEEECCCeEEEeCEEEECCCHHHHcc--eeeCCCCCHHHHHHHHhCCCcceEEEEEEeCCCcccCC--CCCce
Confidence 8 7888999999998999999999999999987 77889999999999999999999999999999999764 22 11
Q ss_pred EecCCCCCCCCcccccccCCCCccccccccccceeecCCCCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeeee
Q psy7654 157 FWTHDDKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLY 236 (373)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~ 236 (373)
+....+ .+. ...++
T Consensus 315 ~~~~~~-----------------------------------------~~~-------------------------~~~~~ 328 (520)
T 1s3e_A 315 MIIDGE-----------------------------------------EAP-------------------------VAYTL 328 (520)
T ss_dssp EEECST-----------------------------------------TCS-------------------------CSEEE
T ss_pred eeccCC-----------------------------------------CCc-------------------------eEEEe
Confidence 111100 000 00112
Q ss_pred eeeecCCCCceEEEEecchhhHHhhcCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEeccCCCCCccccccc-cccccCC
Q psy7654 237 GFYLTTEDPLTFLGWISGASARFMETLSDEQIKTESMKAFRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYS-IYTLTTD 315 (373)
Q Consensus 237 ~~~~~~~~~~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~-~~~~g~~ 315 (373)
+....++...+|++|+.+..+..+..++++++++.++++|+++||.. +...|..+..++|.++||++|+|+ .+.||+.
T Consensus 329 d~~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~~-~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~ 407 (520)
T 1s3e_A 329 DDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSL-EALEPVHYEEKNWCEEQYSGGCYTTYFPPGIL 407 (520)
T ss_dssp ECCCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTCG-GGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHH
T ss_pred eCCCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCcc-ccCCccEEEEEeeCCCCCCCCCCccccCCCcc
Confidence 22222333468999999988888999999999999999999999852 246789999999999999999998 6677753
Q ss_pred ccccchHhhcccccCCCCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhCC
Q psy7654 316 KMNASRHDLEAPLSNGQGKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSDP 371 (373)
Q Consensus 316 ~~~~~~~~l~~p~~~~~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~~ 371 (373)
. ...+.+.+|++ +||||||+++..++|+||||++||++||++|++.+.
T Consensus 408 ~--~~~~~l~~p~~------~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~ 455 (520)
T 1s3e_A 408 T--QYGRVLRQPVD------RIYFAGTETATHWSGYMEGAVEAGERAAREILHAMG 455 (520)
T ss_dssp H--HHGGGTTCCBT------TEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred c--cchHHHhCCCC------CEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHHHHh
Confidence 2 12335666765 799999999987889999999999999999998764
No 6
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=4.6e-32 Score=274.05 Aligned_cols=281 Identities=30% Similarity=0.502 Sum_probs=212.2
Q ss_pred CCchhhcchhhhhh---hhccCCcceeeecCCcHHHHHHHHHHhCCCC---CCCCCCceEEcCCceEEEEecCCCcEEEE
Q psy7654 14 SDSWFETSAKRYNS---FVTHEGCEDTVWKKGGYGNVLKLLLKQMPGQ---TPIDLGKKLLLNKEVTKINWEDANGVLVT 87 (373)
Q Consensus 14 g~~~~~~S~~~~~~---~~~~~g~~~~~~~~gG~~~L~~~L~~~l~~~---~~~~~G~~I~ln~~V~~I~~~~~~~v~v~ 87 (373)
+.+.+..|+..+.. +..+.+...++..+||+++|+++|++.+... .+.-+|++|++|++|++|+. .+++|.|+
T Consensus 172 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~-~~~~v~v~ 250 (472)
T 1b37_A 172 AEPPRVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKY-SPGGVTVK 250 (472)
T ss_dssp SSCGGGBBSTTTSSCHHHHHHCSEEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEE-CSSCEEEE
T ss_pred cccccccchhhccccccccccCCceeeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEE-cCCcEEEE
Confidence 55666677655432 1123333333334899999999999988521 00013578999999999999 78889999
Q ss_pred eCCCcEEEcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCCCCCCCC
Q psy7654 88 CADGSQYSADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHDDKKNPL 167 (373)
Q Consensus 88 ~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~~~~~~~ 167 (373)
+.+|++++||+||+|+|+.+++.+++.|.|.||..+.++++++.++++.||++.|+++||+.. .+..++...+..
T Consensus 251 ~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~-~~~~~~~~~~~~---- 325 (472)
T 1b37_A 251 TEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEG-KGREFFLYASSR---- 325 (472)
T ss_dssp ETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSCCSCCS-TTCSEEEECCSS----
T ss_pred ECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCcCCCCC-CCcceEEecccC----
Confidence 999989999999999999999875567899999999999999999999999999999999874 232222111100
Q ss_pred cccccccCCCCccccccccccceeecCCCCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeecCCCCce
Q psy7654 168 FKDTAVVDGAPWISLFLGTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLTTEDPLT 247 (373)
Q Consensus 168 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~~~~~~~ 247 (373)
.+.. ..|.. ++.. .+ +..+
T Consensus 326 ------------------------------------~~~~---------------------~~~~~--~~~~-~p-~~~~ 344 (472)
T 1b37_A 326 ------------------------------------RGYY---------------------GVWQE--FEKQ-YP-DANV 344 (472)
T ss_dssp ------------------------------------TTSS---------------------CEEEE--CTTT-ST-TCCE
T ss_pred ------------------------------------Cccc---------------------eeeec--ccCC-CC-CCCE
Confidence 0100 01211 1100 12 2357
Q ss_pred EEEEecchhhHHhhcCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEeccCCCCCccccccccccccCCccccchHhhccc
Q psy7654 248 FLGWISGASARFMETLSDEQIKTESMKAFRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASRHDLEAP 327 (373)
Q Consensus 248 L~~~~~g~~a~~~~~ls~e~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~~~l~~p 327 (373)
|++++.++.++.+..++++++.+.++++|+++++. ...++|..+.+++|..|||++|+|+.+.+|+.. ...+.+.+|
T Consensus 345 l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg-~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~--~~~~~l~~p 421 (472)
T 1b37_A 345 LLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPG-KDVPDATDILVPRWWSDRFYKGTFSNWPVGVNR--YEYDQLRAP 421 (472)
T ss_dssp EEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTT-SCCCCCSEEECCCTTTCTTTSSSEEECBTTCCH--HHHHHHHCC
T ss_pred EEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCC-CCCCCCceEEecccCCCCCCCcccCCCCCCCCh--hHHHHHhcc
Confidence 88888777777888899999999999999999942 245678888999999999999999988888753 235678888
Q ss_pred ccCCCCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhC
Q psy7654 328 LSNGQGKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 328 ~~~~~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~ 370 (373)
++ +||||||+++..++|+||||++||++||++|++.+
T Consensus 422 ~~------~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l 458 (472)
T 1b37_A 422 VG------RVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCA 458 (472)
T ss_dssp BT------TEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CC------cEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 86 89999999998778999999999999999998765
No 7
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=1.2e-32 Score=275.94 Aligned_cols=269 Identities=22% Similarity=0.367 Sum_probs=207.9
Q ss_pred ccCCchh-hcchhhhhhhhccCCcc---------eeeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCC
Q psy7654 12 DASDSWF-ETSAKRYNSFVTHEGCE---------DTVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDA 81 (373)
Q Consensus 12 ~~g~~~~-~~S~~~~~~~~~~~g~~---------~~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~ 81 (373)
..+.+.+ ++|+..++.+....|.. ....++||+++|+++|++.+. ++|++|++|++|.. ++
T Consensus 172 ~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg--------~~i~~~~~V~~i~~-~~ 242 (453)
T 2yg5_A 172 GMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAEALG--------DDVFLNAPVRTVKW-NE 242 (453)
T ss_dssp CCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHHHHG--------GGEECSCCEEEEEE-ET
T ss_pred hcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCChHHHHHHHHHhcC--------CcEEcCCceEEEEE-eC
Confidence 3455677 99999887665432221 112358999999999999774 78999999999998 67
Q ss_pred Cc-EEEEeCCCcEEEcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCcee-EEec
Q psy7654 82 NG-VLVTCADGSQYSADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYN-FFWT 159 (373)
Q Consensus 82 ~~-v~v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~-~~~~ 159 (373)
++ |.|++ +|+++.||+||+|+|+.++.+ |.|.|.||..+.++++++.++++.||++.|+++||+.. ++. .+..
T Consensus 243 ~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~--~~~g~~~~ 317 (453)
T 2yg5_A 243 SGATVLAD-GDIRVEASRVILAVPPNLYSR--ISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFWRED--GLSGTGFG 317 (453)
T ss_dssp TEEEEEET-TTEEEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGGGGG--TEEEEEEC
T ss_pred CceEEEEE-CCeEEEcCEEEEcCCHHHHhc--CEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCCCCC--CCCceeec
Confidence 77 88887 667899999999999999887 67889999999999999999999999999999999753 221 1111
Q ss_pred CCCCCCCCcccccccCCCCccccccccccceeecCCCCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeee
Q psy7654 160 HDDKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFY 239 (373)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~ 239 (373)
.+. |+ .+ +++..
T Consensus 318 ~~~---~~--------------------------------------------------------------~~---~~~~~ 329 (453)
T 2yg5_A 318 ASE---VV--------------------------------------------------------------QE---VYDNT 329 (453)
T ss_dssp TTS---SS--------------------------------------------------------------CE---EEECC
T ss_pred CCC---Ce--------------------------------------------------------------EE---EEeCC
Confidence 100 00 01 11212
Q ss_pred ecCCCCceEEEEecchhhHHhhcCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEeccCCCCCccccccc-cccccCCccc
Q psy7654 240 LTTEDPLTFLGWISGASARFMETLSDEQIKTESMKAFRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYS-IYTLTTDKMN 318 (373)
Q Consensus 240 ~~~~~~~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~-~~~~g~~~~~ 318 (373)
..++...+|++|+.++.+..+..++++++++.++++|+++||. ....|..+..++|..+||++|+|. .+.||+..
T Consensus 330 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~--~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~-- 405 (453)
T 2yg5_A 330 NHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGP--KAEEPVVYYESDWGSEEWTRGCYAASFDLGGLH-- 405 (453)
T ss_dssp CTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCG--GGGCCSEEEECCTTTCTTTCSSSCEEECTTHHH--
T ss_pred CCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCc--cCCCccEEEEeecCCCCCCCCCCcCcCCCCccc--
Confidence 2222346888999888888898999999999999999999985 456788999999999999999986 55677421
Q ss_pred cchHhhcccccCCCCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhCCC
Q psy7654 319 ASRHDLEAPLSNGQGKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSDPA 372 (373)
Q Consensus 319 ~~~~~l~~p~~~~~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~~~ 372 (373)
...+.+..|++ +||||||+++..++|+||||++||++||++|++.+.|
T Consensus 406 ~~~~~~~~p~~------~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~~ 453 (453)
T 2yg5_A 406 RYGADSRTPVG------PIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARSKA 453 (453)
T ss_dssp HHGGGTTCCBT------TEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC--
T ss_pred cchHHHhCCcC------ceEEeecccccccccchHHHHHHHHHHHHHHHHHhcC
Confidence 12234666664 8999999999878899999999999999999998764
No 8
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.98 E-value=1.3e-31 Score=271.83 Aligned_cols=272 Identities=16% Similarity=0.170 Sum_probs=210.0
Q ss_pred hhhhhhhccCCchhhcchhhhhhhhccCCc--------ceeeecCCcHHHHHHHHHHhCCCCCCCCCC-ceEEcCCceEE
Q psy7654 5 GKAQNSLDASDSWFETSAKRYNSFVTHEGC--------EDTVWKKGGYGNVLKLLLKQMPGQTPIDLG-KKLLLNKEVTK 75 (373)
Q Consensus 5 ~~~~~~~~~g~~~~~~S~~~~~~~~~~~g~--------~~~~~~~gG~~~L~~~L~~~l~~~~~~~~G-~~I~ln~~V~~ 75 (373)
+...+...++.+.+++|+..++.+....+. .....++||+++|+++|++.+. +.| ++|++|++|++
T Consensus 207 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~-----~~g~~~i~~~~~V~~ 281 (495)
T 2vvm_A 207 LEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQSAFARRFWEEAA-----GTGRLGYVFGCPVRS 281 (495)
T ss_dssp HHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHHHHHHHHHHHHH-----TTTCEEEESSCCEEE
T ss_pred HHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHHHHHHHHHHHhh-----hcCceEEEeCCEEEE
Confidence 334455566888999999998776532111 1112248999999999999987 556 78999999999
Q ss_pred EEecCCCcEEEEeCCCcEEEcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCcee
Q psy7654 76 INWEDANGVLVTCADGSQYSADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYN 155 (373)
Q Consensus 76 I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~ 155 (373)
|+. .+++|.|++.+|+++.||+||+|+|+.+++. |.|.|+||..+.++++.+.|+++.||+|.|+++||+ ++.
T Consensus 282 i~~-~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~--i~~~p~lp~~~~~ai~~~~~~~~~kv~l~~~~~~~~----~~~ 354 (495)
T 2vvm_A 282 VVN-ERDAARVTARDGREFVAKRVVCTIPLNVLST--IQFSPALSTERISAMQAGHVSMCTKVHAEVDNKDMR----SWT 354 (495)
T ss_dssp EEE-CSSSEEEEETTCCEEEEEEEEECCCGGGGGG--SEEESCCCHHHHHHHHHCCCCCCEEEEEEESCGGGG----GEE
T ss_pred EEE-cCCEEEEEECCCCEEEcCEEEECCCHHHHhh--eeeCCCCCHHHHHHHHhcCCCceeEEEEEECCccCC----Cce
Confidence 998 7788999999988899999999999999987 778999999999999999999999999999999984 222
Q ss_pred EEecCCCCCCCCcccccccCCCCccccccccccceeecCCCCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeee
Q psy7654 156 FFWTHDDKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDL 235 (373)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~ 235 (373)
.+.. ++. ++ .| +
T Consensus 355 g~~~-~~~--~~--------------------------------------------------------------~~---~ 366 (495)
T 2vvm_A 355 GIAY-PFN--KL--------------------------------------------------------------CY---A 366 (495)
T ss_dssp EEEC-SSC--SS--------------------------------------------------------------CE---E
T ss_pred eEec-CCC--Cc--------------------------------------------------------------EE---E
Confidence 2211 000 00 01 1
Q ss_pred eeeeecCCCCceEEEEecchhhHHhhcCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEeccCCCCCccccccccccccCC
Q psy7654 236 YGFYLTTEDPLTFLGWISGASARFMETLSDEQIKTESMKAFRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTD 315 (373)
Q Consensus 236 ~~~~~~~~~~~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~ 315 (373)
+.....++++.+|++|+.. .+ . ++++++.+.++++|+++++. ..+|..+.+++|..|||++|+|+++.||+.
T Consensus 367 ~~~~~~~~~~~vl~~~~~~-~~-~---~~~~e~~~~~~~~L~~~~~~---~~~~~~~~~~~W~~dp~~~g~y~~~~~g~~ 438 (495)
T 2vvm_A 367 IGDGTTPAGNTHLVCFGNS-AN-H---IQPDEDVRETLKAVGQLAPG---TFGVKRLVFHNWVKDEFAKGAWFFSRPGMV 438 (495)
T ss_dssp EEEEECTTSCEEEEEEECS-TT-C---CCTTTCHHHHHHHHHTTSTT---SCCEEEEEECCTTTCTTTSSSSCCCCTTHH
T ss_pred ecCCCCCCCCeEEEEEeCc-cc-c---CCCHHHHHHHHHHHHHhcCC---CCCceEEEEeEcCCCCCCCCCccCcCCCcc
Confidence 1112224445678887643 22 1 45667788999999998873 467889999999999999999999989864
Q ss_pred ccccchHhhcccccCCCCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhCCC
Q psy7654 316 KMNASRHDLEAPLSNGQGKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSDPA 372 (373)
Q Consensus 316 ~~~~~~~~l~~p~~~~~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~~~ 372 (373)
. ...+.+.+|.+ +||||||+++..++||||||++||++||++|++.+..
T Consensus 439 ~--~~~~~l~~p~~------~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~~ 487 (495)
T 2vvm_A 439 S--ECLQGLREKHG------GVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELGT 487 (495)
T ss_dssp H--HHHHHHHCCBT------TEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHCC
T ss_pred h--hhHHHHhCcCC------CEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhcc
Confidence 2 24667788875 7999999999878899999999999999999987653
No 9
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.97 E-value=4.9e-31 Score=267.73 Aligned_cols=241 Identities=20% Similarity=0.279 Sum_probs=189.8
Q ss_pred cCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCc----EEEcCEEEEcCCccccccccccc
Q psy7654 40 KKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGS----QYSADKVLITVSLGVFKSDLITF 115 (373)
Q Consensus 40 ~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~----~~~ad~VIvtiP~~~l~~~~i~f 115 (373)
++||+++|+++|++.+. .+|++|++|++|++ ++++|.|++.+|+ +++||+||+|+|+.++.. |.|
T Consensus 236 ~~gG~~~l~~~l~~~l~--------~~i~~~~~V~~I~~-~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~--i~f 304 (498)
T 2iid_A 236 IVDGMDKLPTAMYRDIQ--------DKVHFNAQVIKIQQ-NDQKVTVVYETLSKETPSVTADYVIVCTTSRAVRL--IKF 304 (498)
T ss_dssp ETTCTTHHHHHHHHHTG--------GGEESSCEEEEEEE-CSSCEEEEEECSSSCCCEEEESEEEECSCHHHHTT--SEE
T ss_pred eCCcHHHHHHHHHHhcc--------cccccCCEEEEEEE-CCCeEEEEEecCCcccceEEeCEEEECCChHHHhh--eec
Confidence 58999999999999986 47999999999999 7888999887664 589999999999999877 789
Q ss_pred CCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCC-CceeEEecCCCCCCCCcccccccCCCCccccccccccceeecC
Q psy7654 116 VPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDI-RGYNFFWTHDDKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRF 194 (373)
Q Consensus 116 ~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 194 (373)
.|+||+.+.+++++++|+++.||+|.|+++||++.. .+. ..+.+ .. .
T Consensus 305 ~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~w~~~~~~~~-~~~~~-~~---~--------------------------- 352 (498)
T 2iid_A 305 NPPLLPKKAHALRSVHYRSGTKIFLTCTTKFWEDDGIHGG-KSTTD-LP---S--------------------------- 352 (498)
T ss_dssp ESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGGGTCCSS-EEEES-ST---T---------------------------
T ss_pred CCCCCHHHHHHHHhCCCcceeEEEEEeCCCCccCCCccCC-cccCC-CC---c---------------------------
Confidence 999999999999999999999999999999998631 111 11110 00 0
Q ss_pred CCCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeecCCCCceEEEEecchhhHHhhcCCHHHHHHHHHH
Q psy7654 195 PQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLTTEDPLTFLGWISGASARFMETLSDEQIKTESMK 274 (373)
Q Consensus 195 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~ls~e~~~~~~~~ 274 (373)
...+||+ ...+++.++|++|++++.+..+..++++++++.+++
T Consensus 353 ~~~~~~s-------------------------------------~~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~ 395 (498)
T 2iid_A 353 RFIYYPN-------------------------------------HNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFN 395 (498)
T ss_dssp CEEECCS-------------------------------------SCCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHH
T ss_pred ceEEECC-------------------------------------CCCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHH
Confidence 0001111 001233568888999998988999999999999999
Q ss_pred HHHHHhCCCCCCCC----CceEEeccCCCCCccccccccccccCCccccchHhhcccccCCCCCceEEEeccccCCCCcc
Q psy7654 275 AFRFFLGANYTIPE----PSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASRHDLEAPLSNGQGKQVLLFAGEASNEHQYG 350 (373)
Q Consensus 275 ~L~~~~g~~~~~~~----~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~~~l~~p~~~~~~~~~i~fAGd~~s~~~~g 350 (373)
+|++++|.. .+. +..+.+++|..+||++|+|+...|++.. ...+.+.+|.+ +|||||++++.. +|
T Consensus 396 ~L~~~~g~~--~~~~~~~~~~~~~~~W~~~p~~~G~~~~~~~~~~~--~~~~~l~~p~~------~l~fAGe~t~~~-~g 464 (498)
T 2iid_A 396 DLSLIHQLP--KKDIQSFCYPSVIQKWSLDKYAMGGITTFTPYQFQ--HFSDPLTASQG------RIYFAGEYTAQA-HG 464 (498)
T ss_dssp HHHHHHTCC--HHHHHHHEEEEEEEEGGGCTTTCSSEECCCTTHHH--HHHHHHHCCBT------TEEECSGGGSSS-SS
T ss_pred HHHHHcCCC--hhhhhhhcCccEEEecCCCCCCCceeeecCCcchH--HHHHHHhCCCC------cEEEEEcccccC-Cc
Confidence 999999841 111 1247789999999999999988887542 23456777765 899999999864 58
Q ss_pred hhhHHHHHHHHHHHHHHhhCC
Q psy7654 351 TVNGAVETGWREADRILKSDP 371 (373)
Q Consensus 351 ~veGA~~SG~~AA~~i~~~~~ 371 (373)
+|+||++||++||++|++.+.
T Consensus 465 ~~~GAi~SG~raA~~i~~~l~ 485 (498)
T 2iid_A 465 WIDSTIKSGLRAARDVNLASE 485 (498)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999998764
No 10
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.97 E-value=5.4e-30 Score=254.81 Aligned_cols=255 Identities=19% Similarity=0.258 Sum_probs=196.5
Q ss_pred hhhccCCchhhcchhhhhhhhccCCcceee-------ecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCC
Q psy7654 9 NSLDASDSWFETSAKRYNSFVTHEGCEDTV-------WKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDA 81 (373)
Q Consensus 9 ~~~~~g~~~~~~S~~~~~~~~~~~g~~~~~-------~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~ 81 (373)
.....+.+++++|+..+..++...|..... ...+|+++|++++++.+ | +|++|++|++|++ ++
T Consensus 164 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~--------g-~i~~~~~V~~i~~-~~ 233 (431)
T 3k7m_X 164 AWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDEVFSNGSADLVDAMSQEI--------P-EIRLQTVVTGIDQ-SG 233 (431)
T ss_dssp HHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCEEETTCTHHHHHHHHTTC--------S-CEESSCCEEEEEC-SS
T ss_pred HHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhhhcCCcHHHHHHHHHhhC--------C-ceEeCCEEEEEEE-cC
Confidence 344557788999999887665432211100 23899999999998754 4 8999999999998 78
Q ss_pred CcEEEEeCCCcEEEcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCC
Q psy7654 82 NGVLVTCADGSQYSADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHD 161 (373)
Q Consensus 82 ~~v~v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~ 161 (373)
++|.|++.+|++++||+||+|+|+++++. |.|.|+||..+.++++.+.++...||.+.|+++|| ++... .
T Consensus 234 ~~v~v~~~~g~~~~ad~vi~a~~~~~l~~--i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~-----~i~~~--~- 303 (431)
T 3k7m_X 234 DVVNVTVKDGHAFQAHSVIVATPMNTWRR--IVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEA-----GIECV--G- 303 (431)
T ss_dssp SSEEEEETTSCCEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCT-----TEEEE--B-
T ss_pred CeEEEEECCCCEEEeCEEEEecCcchHhh--eeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCc-----CceEc--C-
Confidence 88999999998899999999999999987 78999999999999999999999999999999874 22111 1
Q ss_pred CCCCCCcccccccCCCCccccccccccceeecCCCCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeec
Q psy7654 162 DKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLT 241 (373)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~ 241 (373)
+. +...+++....
T Consensus 304 d~-------------------------------------------------------------------~~~~~~~~~~~ 316 (431)
T 3k7m_X 304 DG-------------------------------------------------------------------IFPTLYDYCEV 316 (431)
T ss_dssp SS-------------------------------------------------------------------SSSEEEEEEEC
T ss_pred CC-------------------------------------------------------------------CEEEEEeCcCC
Confidence 10 00011222332
Q ss_pred CCCCceEEEEecchhhHHhhcCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEeccCCCCCccccccccccccCCccccch
Q psy7654 242 TEDPLTFLGWISGASARFMETLSDEQIKTESMKAFRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASR 321 (373)
Q Consensus 242 ~~~~~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~ 321 (373)
..+..+|++|+.++. +...+++ .+.+.|+++++. . .|..+..++|..|||++|+|+++.||+.. ...
T Consensus 317 ~~~~~~l~~~~~g~~---~~~~~~~----~~~~~l~~~~~~---~-~~~~~~~~~W~~d~~~~G~~~~~~~g~~~--~~~ 383 (431)
T 3k7m_X 317 SESERLLVAFTDSGS---FDPTDIG----AVKDAVLYYLPE---V-EVLGIDYHDWIADPLFEGPWVAPRVGQFS--RVH 383 (431)
T ss_dssp SSSEEEEEEEEETTT---CCTTCHH----HHHHHHHHHCTT---C-EEEEEECCCTTTCTTTSSSSCCCCTTTTT--TSS
T ss_pred CCCCeEEEEEecccc---CCCCCHH----HHHHHHHHhcCC---C-CccEeEecccCCCCCCCCCCCCcCCCCCc--ccH
Confidence 233467888888765 3333332 456677888763 3 37888999999999999999999999743 467
Q ss_pred HhhcccccCCCCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhh
Q psy7654 322 HDLEAPLSNGQGKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKS 369 (373)
Q Consensus 322 ~~l~~p~~~~~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~ 369 (373)
+.|.+|.+ |||||||+++..++||||||++||+|||.+|+..
T Consensus 384 ~~l~~p~g------~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 384 KELGEPAG------RIHFVGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp GGGGSCBT------TEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred HHHhCCCC------cEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 88999976 8999999999889999999999999999999864
No 11
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.96 E-value=1e-28 Score=250.10 Aligned_cols=245 Identities=18% Similarity=0.275 Sum_probs=186.9
Q ss_pred ecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCC---cEEEcCEEEEcCCccccccccccc
Q psy7654 39 WKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADG---SQYSADKVLITVSLGVFKSDLITF 115 (373)
Q Consensus 39 ~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G---~~~~ad~VIvtiP~~~l~~~~i~f 115 (373)
.++||+++|+++|++.+.+ ++|++|++|++|++ ++++|.|++.+| +++.||+||+|+|+.+++. |.+
T Consensus 233 ~~~gG~~~l~~~l~~~l~~-------~~i~~~~~V~~i~~-~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~--l~~ 302 (489)
T 2jae_A 233 TPVGGMDRIYYAFQDRIGT-------DNIVFGAEVTSMKN-VSEGVTVEYTAGGSKKSITADYAICTIPPHLVGR--LQN 302 (489)
T ss_dssp EETTCTTHHHHHHHHHHCG-------GGEETTCEEEEEEE-ETTEEEEEEEETTEEEEEEESEEEECSCHHHHTT--SEE
T ss_pred eecCCHHHHHHHHHHhcCC-------CeEEECCEEEEEEE-cCCeEEEEEecCCeEEEEECCEEEECCCHHHHHh--Ccc
Confidence 3589999999999998852 58999999999999 788899988776 5789999999999999887 555
Q ss_pred CCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCCCCCCCCcccccccCCCCccccccccccceeecCC
Q psy7654 116 VPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHDDKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRFP 195 (373)
Q Consensus 116 ~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 195 (373)
+||+.+.+++++++|+++.||++.|+++||++....++.+...+.. + .
T Consensus 303 --~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~---~----------------~----------- 350 (489)
T 2jae_A 303 --NLPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKD---I----------------S----------- 350 (489)
T ss_dssp --CCCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESST---T----------------C-----------
T ss_pred --CCCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCC---c----------------e-----------
Confidence 6899999999999999999999999999997642222111100000 0 0
Q ss_pred CCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeecCCCCceEE-EEecchhhHHhhcCCHHHHHHHHHH
Q psy7654 196 QKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLTTEDPLTFL-GWISGASARFMETLSDEQIKTESMK 274 (373)
Q Consensus 196 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~~~~~~~L~-~~~~g~~a~~~~~ls~e~~~~~~~~ 274 (373)
..|||+. .+ +..+++|+ +|++++.+..+..++++++++.+++
T Consensus 351 ~~~~~s~--------------------------------~~-----~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~l~ 393 (489)
T 2jae_A 351 QIMFPYD--------------------------------HY-----NSDRGVVVAYYSSGKRQEAFESLTHRQRLAKAIA 393 (489)
T ss_dssp EEECCSS--------------------------------ST-----TSSCEEEEEEEEETHHHHHHHTSCHHHHHHHHHH
T ss_pred EEEeCCC--------------------------------CC-----CCCCCEEEEEeeCCchhhhhhcCCHHHHHHHHHH
Confidence 0011110 00 01133555 5899999989999999999999999
Q ss_pred HHHHHhCCCCCCCCCceEEeccCCCCCcccccccccc------ccCCccccchHhhcccccCCCCCceEEEeccccCCCC
Q psy7654 275 AFRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYT------LTTDKMNASRHDLEAPLSNGQGKQVLLFAGEASNEHQ 348 (373)
Q Consensus 275 ~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~------~g~~~~~~~~~~l~~p~~~~~~~~~i~fAGd~~s~~~ 348 (373)
+|++++|.+ ...+|.....++|.++||+.|+|+.+. ||... ...+.+.+|.+ +|||||++++. +
T Consensus 394 ~L~~~~~~~-~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~--~~~~~l~~~~~------~l~faG~~~~~-~ 463 (489)
T 2jae_A 394 EGSEIHGEK-YTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAAT--PEYEKLLEPVD------KIYFAGDHLSN-A 463 (489)
T ss_dssp HHHHHHCGG-GGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CC--HHHHHHTSCBT------TEEECSGGGBS-S
T ss_pred HHHHHcCcc-hhhhccccEEEEcCCCCCCCCcchhcccccCCCcccch--hhHHHHhCCCC------cEEEeEHHhcc-C
Confidence 999999841 124677788899999999999999876 66432 24566777765 89999999985 5
Q ss_pred cchhhHHHHHHHHHHHHHHhhCCC
Q psy7654 349 YGTVNGAVETGWREADRILKSDPA 372 (373)
Q Consensus 349 ~g~veGA~~SG~~AA~~i~~~~~~ 372 (373)
.++|+||++||.+||++|++.+.+
T Consensus 464 ~~~v~gAi~sg~~aA~~i~~~l~~ 487 (489)
T 2jae_A 464 IAWQHGALTSARDVVTHIHERVAQ 487 (489)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhh
Confidence 689999999999999999987654
No 12
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.95 E-value=5.9e-29 Score=261.52 Aligned_cols=277 Identities=12% Similarity=0.085 Sum_probs=190.2
Q ss_pred CchhhcchhhhhhhhccCCcceeeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceE--EEEecCCCc-------EE
Q psy7654 15 DSWFETSAKRYNSFVTHEGCEDTVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVT--KINWEDANG-------VL 85 (373)
Q Consensus 15 ~~~~~~S~~~~~~~~~~~g~~~~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~--~I~~~~~~~-------v~ 85 (373)
.+...+|+..++.+.-.+.......+.||+++|+++|++.+.+ |+.|++|++|+ +|.+ ++++ |.
T Consensus 317 ~~~~~~S~le~L~~~~~~~~~~~~~i~GG~~~L~~aLa~~l~~------g~~I~l~~~V~~~~I~~-~~~g~~~~~~~V~ 389 (721)
T 3ayj_A 317 KPLYNISLVEMMRLILWDYSNEYTLPVTENVEFIRNLFLKAQN------VGAGKLVVQVRQERVAN-ACHSGTASARAQL 389 (721)
T ss_dssp GGGTTBBHHHHHHHHHTTTTCEECCSSSSTHHHHHHHHHHHHH------HTTTSEEEEEECEEEEE-EEECSSSSCCEEE
T ss_pred CCccchhHHHHHHHHhcCCccceeEECCcHHHHHHHHHHhccc------CCceEeCCEEEeeeEEE-CCCCCccccceEE
Confidence 4566788887766542221222334589999999999998720 25799999999 9998 4443 88
Q ss_pred E-EeCCCc--EEEcCEEEEcCCcccccc----cccc-------c---------------CCCC-C-------HHHHHHHh
Q psy7654 86 V-TCADGS--QYSADKVLITVSLGVFKS----DLIT-------F---------------VPPL-P-------PQKKNIIE 128 (373)
Q Consensus 86 v-~~~~G~--~~~ad~VIvtiP~~~l~~----~~i~-------f---------------~p~L-p-------~~~~~ai~ 128 (373)
| .+.+|+ +++||+||+|+|++++.. ..|. + .|.| | ..+.++++
T Consensus 390 V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~ 469 (721)
T 3ayj_A 390 LSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIG 469 (721)
T ss_dssp EEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHH
T ss_pred EEEecCCceEEEEcCEEEECCCHHHHhhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHH
Confidence 8 456676 789999999999998842 2244 3 3446 8 89999999
Q ss_pred cCCCcceeEEEEEc-----CCCCCCCCCCce--eEEecCCCCCCCCcccccccCCCCccccccccccceeecCCCCCCCC
Q psy7654 129 SLFLGTVDKVFVRF-----PQKWWPDDIRGY--NFFWTHDDKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQKWWPD 201 (373)
Q Consensus 129 ~~~~~~~~kv~l~~-----~~~~W~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 201 (373)
+++|+++.||++.| ++|||++. .+. ...+++.. + ..+|+- ++|+
T Consensus 470 ~l~~~~s~Kv~l~~~~~~~~~~fW~~~-~g~~i~~s~TD~~----~--------------------r~~~~~----p~p~ 520 (721)
T 3ayj_A 470 QLHMARSSKVFATVKTAALDQPWVPQW-RGEPIKAVVSDSG----L--------------------AASYVV----PSPI 520 (721)
T ss_dssp TCCEECEEEEEEEEEGGGGGSTTSCEE-TTEECCEEEETTT----T--------------------EEEEEE----ECSC
T ss_pred hcCcccceEEEEEEccccCCCCccccc-CCCCceeeecCCC----c--------------------ceEEEe----ccCc
Confidence 99999999999999 99999975 221 12211110 0 000000 0000
Q ss_pred CCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeecCCCCceEEEEecchhhHHh------hcCCHHHH-------
Q psy7654 202 DVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLTTEDPLTFLGWISGASARFM------ETLSDEQI------- 268 (373)
Q Consensus 202 ~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~~~~~~~L~~~~~g~~a~~~------~~ls~e~~------- 268 (373)
. .+.. .++...+|.+|+++++|.++ ..++++++
T Consensus 521 ~---------------------------------~d~~-~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~ 566 (721)
T 3ayj_A 521 V---------------------------------EDGQ-APEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGM 566 (721)
T ss_dssp C--------------------------------------CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHH
T ss_pred c---------------------------------cccC-CCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHH
Confidence 0 0111 11222466779999999998 66777777
Q ss_pred HHHHHHHHH--HHhCCCCC------------CCCCceEEeccCCCCCccccccccccccCCc----cccch--Hhhcccc
Q psy7654 269 KTESMKAFR--FFLGANYT------------IPEPSRVFHSSWGTNKHFKGSYSIYTLTTDK----MNASR--HDLEAPL 328 (373)
Q Consensus 269 ~~~~~~~L~--~~~g~~~~------------~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~----~~~~~--~~l~~p~ 328 (373)
++.++++|+ ++||. .. ...+.++..++|.+|| +.|+|..+.||+.. +.++. ..+.+|.
T Consensus 567 ~~~~l~~la~~~~~p~-~~~~~~~~~~~l~~~~~~~~~~~~dW~~dp-s~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~ 644 (721)
T 3ayj_A 567 YRTMVNRAYRYVKYAG-ASNAQPWWFYQLLAEARTADRFVFDWTTNK-TAGGFKLDMTGDHHQSNLCFRYHTHALAASLD 644 (721)
T ss_dssp HHHHHHHTCCEECCTT-CSSCEECHHHHHHHTSCSTTCEEEEGGGST-TSSSEECCBTTTHHHHHHHHHGGGGGGCTTTC
T ss_pred HHHHHHHHhhhccCcc-ccccccchhhhhhhhcccCceEEEeCCCCC-CCCccccCCCccchhhhhhhhhhhhccccCCC
Confidence 999999999 88874 21 0124567899999999 99999999999721 00011 1122233
Q ss_pred cCCCCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhC
Q psy7654 329 SNGQGKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 329 ~~~~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~ 370 (373)
+|||||||++|. +.||||||++||.+||.+|+..+
T Consensus 645 ------gri~fAGe~~S~-~~GWieGAl~Sa~~Aa~~i~~~~ 679 (721)
T 3ayj_A 645 ------NRFFIASDSYSH-LGGWLEGAFMSALNAVAGLIVRA 679 (721)
T ss_dssp ------CCEEECSGGGSS-CTTSHHHHHHHHHHHHHHHHHHH
T ss_pred ------CCEEEeehhhcc-CCceehHHHHHHHHHHHHHHHHh
Confidence 389999999995 68999999999999999998754
No 13
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.93 E-value=1.5e-25 Score=224.35 Aligned_cols=270 Identities=15% Similarity=0.164 Sum_probs=195.8
Q ss_pred hhhhccCCchhhcchhhhhhhhc-----c----CC-----------------cceeeecCCcHHHHHHHHHHhCCCCCCC
Q psy7654 8 QNSLDASDSWFETSAKRYNSFVT-----H----EG-----------------CEDTVWKKGGYGNVLKLLLKQMPGQTPI 61 (373)
Q Consensus 8 ~~~~~~g~~~~~~S~~~~~~~~~-----~----~g-----------------~~~~~~~~gG~~~L~~~L~~~l~~~~~~ 61 (373)
.+...++.+.+++|+...+.++. + .+ .......+||+++|+++|++.+..
T Consensus 172 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~---- 247 (470)
T 3i6d_A 172 LLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL---- 247 (470)
T ss_dssp HHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EEEETTCTHHHHHHHHHTCCS----
T ss_pred hhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHHHHHHHHHHhcCC----
Confidence 34445577888999876654331 0 00 011223589999999999998852
Q ss_pred CCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCcceeEEEEE
Q psy7654 62 DLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGTVDKVFVR 141 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~ 141 (373)
++|++|++|++|++ ++++|.|++.+|+++.||+||+|+|+.++.+ +.+.|+ ..++++++.|+++.||++.
T Consensus 248 ---~~i~~~~~V~~i~~-~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~--l~~~~~----~~~~~~~~~~~~~~~v~l~ 317 (470)
T 3i6d_A 248 ---TKVYKGTKVTKLSH-SGSCYSLELDNGVTLDADSVIVTAPHKAAAG--MLSELP----AISHLKNMHSTSVANVALG 317 (470)
T ss_dssp ---EEEECSCCEEEEEE-CSSSEEEEESSSCEEEESEEEECSCHHHHHH--HTTTST----THHHHHTCEEEEEEEEEEE
T ss_pred ---CEEEeCCceEEEEE-cCCeEEEEECCCCEEECCEEEECCCHHHHHH--HcCCch----hhHHHhcCCCCceEEEEEE
Confidence 68999999999999 7788999999998899999999999999887 444442 2568899999999999999
Q ss_pred cCCCCCCCCCCceeEEecCCCCCCCCcccccccCCCCccccccccccceeecCCCCCCCCCCCCCCccccCCCCCCcccc
Q psy7654 142 FPQKWWPDDIRGYNFFWTHDDKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFK 221 (373)
Q Consensus 142 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 221 (373)
|+++||+....+++++++..+... + .
T Consensus 318 ~~~~~~~~~~~~~g~l~~~~~~~~-~----------------~------------------------------------- 343 (470)
T 3i6d_A 318 FPEGSVQMEHEGTGFVISRNSDFA-I----------------T------------------------------------- 343 (470)
T ss_dssp ESSTTCCCSSCSSEEEECSTTCCS-E----------------E-------------------------------------
T ss_pred ECchhcCCCCCCeEEEccCCCCCC-c----------------e-------------------------------------
Confidence 999999876666666644322100 0 0
Q ss_pred cccccCCCcceeeeeeeeecCCCCceEEEEecchhhHHhhcCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEeccCCCCC
Q psy7654 222 DTAVVDGAPWIVDLYGFYLTTEDPLTFLGWISGASARFMETLSDEQIKTESMKAFRFFLGANYTIPEPSRVFHSSWGTNK 301 (373)
Q Consensus 222 d~~~~~~~~w~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~W~~dp 301 (373)
...|.+..++... +++..+|++++++..++.+..++++++++.++++|+++||. .++|....+++|..
T Consensus 344 ------~~~~~s~~~~~~~-p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~---~~~p~~~~~~~w~~-- 411 (470)
T 3i6d_A 344 ------ACTWTNKKWPHAA-PEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNI---NGEPEMTCVTRWHE-- 411 (470)
T ss_dssp ------EEEEHHHHCGGGS-CTTCEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSCC---CSCCSEEEEEEEEE--
T ss_pred ------EEEEEcCcCCCcC-CCCCEEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHhCC---CCCceEEEEEEcCC--
Confidence 0123322222222 33456788888888888888999999999999999999995 35788999999975
Q ss_pred ccccccccccccCCcc-ccchHhhcccccCCCCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhC
Q psy7654 302 HFKGSYSIYTLTTDKM-NASRHDLEAPLSNGQGKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 302 ~~~G~~~~~~~g~~~~-~~~~~~l~~p~~~~~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~ 370 (373)
+++.+.+|+... ....+.+.++.+ +||||||++.+. +|+||+.||++||++|++.|
T Consensus 412 ----a~p~~~~g~~~~~~~~~~~l~~~~~------~l~~aG~~~~g~---gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 412 ----SMPQYHVGHKQRIKELREALASAYP------GVYMTGASFEGV---GIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp ----EEEECBTTHHHHHHHHHHHHHHHST------TEEECSTTTSCC---SHHHHHHHHHHHHHHHHHHH
T ss_pred ----ccCCCCCCHHHHHHHHHHHHHhhCC------CEEEEeecCCCC---CHHHHHHHHHHHHHHHHHHh
Confidence 455555664210 012233555554 799999998753 49999999999999999865
No 14
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.92 E-value=1.8e-24 Score=217.92 Aligned_cols=238 Identities=16% Similarity=0.163 Sum_probs=175.8
Q ss_pred eecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcccccccccccCC
Q psy7654 38 VWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGVFKSDLITFVP 117 (373)
Q Consensus 38 ~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p 117 (373)
..++||+++|+++|++.+.. ++|++|++|++|++ .+++|.|++.+| ++.||+||+|+|++++.+ +.+.+
T Consensus 229 ~~~~~G~~~l~~~l~~~l~~-------~~i~~~~~V~~i~~-~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~--ll~~~ 297 (475)
T 3lov_A 229 LSLETGLESLIERLEEVLER-------SEIRLETPLLAISR-EDGRYRLKTDHG-PEYADYVLLTIPHPQVVQ--LLPDA 297 (475)
T ss_dssp EEETTCHHHHHHHHHHHCSS-------CEEESSCCCCEEEE-ETTEEEEECTTC-CEEESEEEECSCHHHHHH--HCTTS
T ss_pred EeeCChHHHHHHHHHhhccC-------CEEEcCCeeeEEEE-eCCEEEEEECCC-eEECCEEEECCCHHHHHH--HcCcc
Confidence 34589999999999999962 58999999999999 788899999999 899999999999999887 44444
Q ss_pred CCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCCCCCCCCcccccccCCCCccccccccccceeecCCCC
Q psy7654 118 PLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHDDKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQK 197 (373)
Q Consensus 118 ~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 197 (373)
++ ++++++.|+++.||++.|+++| +....+++++.+..+... + ++
T Consensus 298 ~~-----~~~~~~~~~~~~~v~l~~~~~~-~~~~~g~g~l~~~~~~~~-~----------------~~------------ 342 (475)
T 3lov_A 298 HL-----PELEQLTTHSTATVTMIFDQQQ-SLPIEGTGFVVNRRAPYS-I----------------TA------------ 342 (475)
T ss_dssp CC-----HHHHTCCEEEEEEEEEEEECCS-SCSSSSSEEEECTTSSCS-E----------------EE------------
T ss_pred CH-----HHHhcCCCCeEEEEEEEECCcC-CCCCCCEEEEecCCCCCc-e----------------EE------------
Confidence 43 6789999999999999999998 444456666643321100 0 00
Q ss_pred CCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeecCCCCceEEEEecchhhHHhhcCCHHHHHHHHHHHHH
Q psy7654 198 WWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLTTEDPLTFLGWISGASARFMETLSDEQIKTESMKAFR 277 (373)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~L~ 277 (373)
..|.+..++... ++ ..+|.+|+++..+..+..++++++++.++++|+
T Consensus 343 -------------------------------~~~~s~~~~~~~-p~-~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~ 389 (475)
T 3lov_A 343 -------------------------------CTAIDQKWNHSA-PD-HTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLE 389 (475)
T ss_dssp -------------------------------EEEHHHHCTTTC-TT-EEEEEEEECBTTBCGGGGSCHHHHHHHHHHHHH
T ss_pred -------------------------------EEEEcccCCCCC-CC-cEEEEEEeCCCCCCcccCCCHHHHHHHHHHHHH
Confidence 112222222111 22 457788888888888889999999999999999
Q ss_pred HHhCCCCCCCCCceEEeccCCCCCccccccccccccCCcc-ccchHhhcccccCCCCCceEEEeccccCCCCcchhhHHH
Q psy7654 278 FFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKM-NASRHDLEAPLSNGQGKQVLLFAGEASNEHQYGTVNGAV 356 (373)
Q Consensus 278 ~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~-~~~~~~l~~p~~~~~~~~~i~fAGd~~s~~~~g~veGA~ 356 (373)
++||. ..+|....+++|..+ ++.+.+|+... ....+.+..|.+ +||||||++.+ .+|+||+
T Consensus 390 ~~~g~---~~~p~~~~v~~w~~a------~p~~~~g~~~~~~~~~~~l~~~~~------~l~~aG~~~~g---~g~~~a~ 451 (475)
T 3lov_A 390 KICGR---TLEPKQVIISRLMDG------LPAYTVGHADRIQRVREEVLAQYP------GIYLAGLAYDG---VGLPDCV 451 (475)
T ss_dssp HHHSS---CCCCSEEEEEEEEEE------EECCCTTHHHHHHHHHHHHHHHST------TEEECSTTTSC---SSHHHHH
T ss_pred HHhCC---CCCCeEEEEEEcccC------CCCCCCChHHHHHHHHHHHHhhCC------CEEEEccCCCC---CCHHHHH
Confidence 99996 247889999999863 34445554210 011233555554 79999999875 2599999
Q ss_pred HHHHHHHHHHHhhCCC
Q psy7654 357 ETGWREADRILKSDPA 372 (373)
Q Consensus 357 ~SG~~AA~~i~~~~~~ 372 (373)
+||++||++|++.+..
T Consensus 452 ~sG~~aA~~i~~~l~~ 467 (475)
T 3lov_A 452 ASAKTMIESIELEQSH 467 (475)
T ss_dssp HHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999998764
No 15
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.91 E-value=1.8e-23 Score=210.70 Aligned_cols=240 Identities=14% Similarity=0.229 Sum_probs=171.7
Q ss_pred ecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEe---CCCcEEEcCEEEEcCCccccccccccc
Q psy7654 39 WKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTC---ADGSQYSADKVLITVSLGVFKSDLITF 115 (373)
Q Consensus 39 ~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~---~~G~~~~ad~VIvtiP~~~l~~~~i~f 115 (373)
.++||+++|+++|++.+. ++|++|++|++|.. ++++|.|++ .+|+++.||+||+|+|+.++.. +
T Consensus 232 ~~~gG~~~l~~~l~~~lg--------~~i~~~~~V~~i~~-~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~--l-- 298 (478)
T 2ivd_A 232 TFDGGLQVLIDALAASLG--------DAAHVGARVEGLAR-EDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAK--L-- 298 (478)
T ss_dssp EETTCTHHHHHHHHHHHG--------GGEESSEEEEEEEC-C--CCEEEEEETTEEEEEECSEEEECSCHHHHHH--H--
T ss_pred EECCCHHHHHHHHHHHhh--------hhEEcCCEEEEEEe-cCCeEEEEEeecCCCceEEcCEEEECCCHHHHHH--H--
Confidence 458999999999999874 68999999999998 677788887 6777899999999999999876 3
Q ss_pred CCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCCCCCCCCcccccccCCCCccccccccccceeecCC
Q psy7654 116 VPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHDDKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRFP 195 (373)
Q Consensus 116 ~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 195 (373)
.|.+|+.+.++++++.|+++.||++.|++++|+.. .+++++.+..+.. ++
T Consensus 299 l~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~-~~~~~~~~~~~~~-~~---------------------------- 348 (478)
T 2ivd_A 299 LRPLDDALAALVAGIAYAPIAVVHLGFDAGTLPAP-DGFGFLVPAEEQR-RM---------------------------- 348 (478)
T ss_dssp HTTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCC-CSSEEECCGGGCC-SC----------------------------
T ss_pred hhccCHHHHHHHhcCCCCcEEEEEEEEccccCCCC-CceEEEecCCCCC-ce----------------------------
Confidence 26789888999999999999999999999999863 3444442110000 00
Q ss_pred CCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeecCCCCceEEEEecchhhHHhhcCCHHHHHHHHHHH
Q psy7654 196 QKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLTTEDPLTFLGWISGASARFMETLSDEQIKTESMKA 275 (373)
Q Consensus 196 ~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~ 275 (373)
.+ ..|.+..++.. .+.+..+|++++++..+..+..++++++.+.++++
T Consensus 349 --------~~-----------------------~~~~s~~~~~~-~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (478)
T 2ivd_A 349 --------LG-----------------------AIHASTTFPFR-AEGGRVLYSCMVGGARQPGLVEQDEDALAALAREE 396 (478)
T ss_dssp --------CE-----------------------EEEHHHHCGGG-BSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHHH
T ss_pred --------EE-----------------------EEEEcccCCCc-CCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHHH
Confidence 00 01111111111 13334578888888877778889999999999999
Q ss_pred HHHHhCCCCCCCCCceEEeccCCCCCccccccccccccCCccccchHhhcccccCCCCCceEEEeccccCCCCcchhhHH
Q psy7654 276 FRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASRHDLEAPLSNGQGKQVLLFAGEASNEHQYGTVNGA 355 (373)
Q Consensus 276 L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~~~l~~p~~~~~~~~~i~fAGd~~s~~~~g~veGA 355 (373)
|++++|. ...|....+++|.. +++.+.+|+.. ....+..+... .++|||||+++.+ ++|+||
T Consensus 397 l~~~~~~---~~~p~~~~~~~w~~------~~p~~~~g~~~---~~~~~~~~~~~---~~~l~~aG~~~~g---~gv~gA 458 (478)
T 2ivd_A 397 LKALAGV---TARPSFTRVFRWPL------GIPQYNLGHLE---RVAAIDAALQR---LPGLHLIGNAYKG---VGLNDC 458 (478)
T ss_dssp HHHHHCC---CSCCSEEEEEEESS------CCBCCBTTHHH---HHHHHHHHHHT---STTEEECSTTTSC---CSHHHH
T ss_pred HHHHhCC---CCCCcEEEEEECCC------cccCCCcCHHH---HHHHHHHHHhh---CCCEEEEccCCCC---CCHHHH
Confidence 9999985 24688888899975 45555566421 12222222210 1389999999853 359999
Q ss_pred HHHHHHHHHHHHhhCC
Q psy7654 356 VETGWREADRILKSDP 371 (373)
Q Consensus 356 ~~SG~~AA~~i~~~~~ 371 (373)
+.||.+||++|++.+.
T Consensus 459 ~~SG~~aA~~i~~~l~ 474 (478)
T 2ivd_A 459 IRNAAQLADALVAGNT 474 (478)
T ss_dssp HHHHHHHHHHHCC---
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999988765
No 16
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.91 E-value=2.8e-23 Score=200.67 Aligned_cols=232 Identities=12% Similarity=0.097 Sum_probs=170.4
Q ss_pred cCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcccccccccccCCCC
Q psy7654 40 KKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGVFKSDLITFVPPL 119 (373)
Q Consensus 40 ~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~L 119 (373)
..+|+++++++|++.+. .+|++|++|++|++ ++++|.|++.+|+++.+|+||+|+|++.+.+++-.+.|.|
T Consensus 107 ~~~g~~~l~~~l~~~~g--------~~i~~~~~V~~i~~-~~~~~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l 177 (342)
T 3qj4_A 107 APQGISSIIKHYLKESG--------AEVYFRHRVTQINL-RDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLI 177 (342)
T ss_dssp CTTCTTHHHHHHHHHHT--------CEEESSCCEEEEEE-CSSSEEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHS
T ss_pred cCCCHHHHHHHHHHhcC--------CEEEeCCEEEEEEE-cCCEEEEEECCCCEEEcCEEEECCCHHHHHHHhccccccc
Confidence 48999999999998763 79999999999999 7888999998887789999999999998877322345678
Q ss_pred CHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCCCCCCCCcccccccCCCCccccccccccceeecCCCCCC
Q psy7654 120 PPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHDDKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQKWW 199 (373)
Q Consensus 120 p~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 199 (373)
|+...++++++.|+++.+|.+.|+++||.+. +..+++.+....
T Consensus 178 ~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~-~~~g~~~~~~~~------------------------------------ 220 (342)
T 3qj4_A 178 SECQRQQLEAVSYSSRYALGLFYEAGTKIDV-PWAGQYITSNPC------------------------------------ 220 (342)
T ss_dssp CHHHHHHHHTCCBCCEEEEEEECSSCC--CC-SCSEEECSSCSS------------------------------------
T ss_pred CHHHHHHHhcCCccccEEEEEEECCCCccCC-ceeeEEccCCcc------------------------------------
Confidence 8888999999999999999999999988753 223333211000
Q ss_pred CCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeec----CCCCceEEEEecchhhHHhhcCCHHHHHHHHHHH
Q psy7654 200 PDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLT----TEDPLTFLGWISGASARFMETLSDEQIKTESMKA 275 (373)
Q Consensus 200 ~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~----~~~~~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~ 275 (373)
..|.. ++..+. +.+..+++.++++..++.+..++++++.+.++++
T Consensus 221 -----------------------------~~~~~--~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (342)
T 3qj4_A 221 -----------------------------IRFVS--IDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQELVFQQ 269 (342)
T ss_dssp -----------------------------EEEEE--EHHHHTTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHHHHHHHH
T ss_pred -----------------------------eEEEE--ccccCCCCCCCCCCceEEEECCHHHHHHhhcCCHHHHHHHHHHH
Confidence 01211 111111 1112378888888888888899999999999999
Q ss_pred HHHHhCCCCCCCCCceEEeccCCCCCccccccccccccCCccccchHhhcccccCCCCCceEEEeccccCCCCcchhhHH
Q psy7654 276 FRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASRHDLEAPLSNGQGKQVLLFAGEASNEHQYGTVNGA 355 (373)
Q Consensus 276 L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~~~l~~p~~~~~~~~~i~fAGd~~s~~~~g~veGA 355 (373)
|++++|. .++|..+.+++|.. +.+.+.... ....+... ..++|++|||++.+ +.||||
T Consensus 270 l~~~~g~---~~~p~~~~v~rW~~------a~p~~~~~~-----~~~~~~~~-----~~~~l~laGd~~~g---~~v~~a 327 (342)
T 3qj4_A 270 LENILPG---LPQPIATKCQKWRH------SQVTNAAAN-----CPGQMTLH-----HKPFLACGGDGFTQ---SNFDGC 327 (342)
T ss_dssp HHHHSCS---CCCCSEEEEEEETT------CSBSSCCSS-----SCSCEEEE-----TTTEEEECSGGGSC---SSHHHH
T ss_pred HHHhccC---CCCCceeeeccccc------cccccccCC-----CcceeEec-----CCccEEEEccccCC---CCccHH
Confidence 9999994 56899999999985 222221110 01112201 12489999999976 489999
Q ss_pred HHHHHHHHHHHHhhC
Q psy7654 356 VETGWREADRILKSD 370 (373)
Q Consensus 356 ~~SG~~AA~~i~~~~ 370 (373)
++||.+||++|++.|
T Consensus 328 i~sg~~aa~~i~~~l 342 (342)
T 3qj4_A 328 ITSALCVLEALKNYI 342 (342)
T ss_dssp HHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999998764
No 17
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.91 E-value=2.2e-24 Score=218.95 Aligned_cols=244 Identities=19% Similarity=0.280 Sum_probs=172.0
Q ss_pred ecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCc------EEEEeC--CC---cEEEcCEEEEcCCccc
Q psy7654 39 WKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANG------VLVTCA--DG---SQYSADKVLITVSLGV 107 (373)
Q Consensus 39 ~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~------v~v~~~--~G---~~~~ad~VIvtiP~~~ 107 (373)
.++||+++|+++|++.+.+ ++|++|++|++|.+ .+++ |.|++. +| +++.||+||+|+|+..
T Consensus 237 ~~~GG~~~l~~~l~~~l~~-------~~i~~~~~V~~I~~-~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~ 308 (504)
T 1sez_A 237 SFLGGMQTLTDAICKDLRE-------DELRLNSRVLELSC-SCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCD 308 (504)
T ss_dssp EETTCTHHHHHHHHTTSCT-------TTEETTCCEEEEEE-ECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHH
T ss_pred eeCcHHHHHHHHHHhhccc-------ceEEcCCeEEEEEe-cCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHH
Confidence 3589999999999997742 58999999999998 5555 766654 45 5789999999999999
Q ss_pred cccccccc---CCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCCCCCCCCcccccccCCCCcccccc
Q psy7654 108 FKSDLITF---VPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHDDKKNPLFKDTAVVDGAPWISLFL 184 (373)
Q Consensus 108 l~~~~i~f---~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (373)
+.+ +.+ .+++++. .++++.+.++.+|++.|++++|+....+++++++..+....+ ..+
T Consensus 309 l~~--ll~~~~~~~~~~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~--------------~~~ 369 (504)
T 1sez_A 309 VKS--MKIAKRGNPFLLN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGL--------------KTL 369 (504)
T ss_dssp HHT--SEEESSSSBCCCT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTC--------------CSS
T ss_pred HHH--HhhcccCCcccHH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCC--------------ccc
Confidence 987 332 1234432 277889999999999999999987666676664321100000 000
Q ss_pred ccccceeecCCCCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeecCCCCceEEEEecchhhHHhhcCC
Q psy7654 185 GTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLTTEDPLTFLGWISGASARFMETLS 264 (373)
Q Consensus 185 g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~ls 264 (373)
+ ..|.+..++... +++..+|++|+++..+..+..++
T Consensus 370 --------------------~-----------------------~~~~s~~~~~~~-p~g~~~l~~~~~g~~~~~~~~~~ 405 (504)
T 1sez_A 370 --------------------G-----------------------TLFSSMMFPDRA-PNNVYLYTTFVGGSRNRELAKAS 405 (504)
T ss_dssp --------------------E-----------------------EEEHHHHCGGGS-CTTEEEEEEEEESTTCGGGTTCC
T ss_pred --------------------e-----------------------EEeeccccCCcC-CCCCEEEEEEeCCCCcccccCCC
Confidence 0 012222222211 33455788899998888888999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCceEEeccCCCCCccccccccccccCCccccchHhhcccccCCCCCceEEEecccc
Q psy7654 265 DEQIKTESMKAFRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASRHDLEAPLSNGQGKQVLLFAGEAS 344 (373)
Q Consensus 265 ~e~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~~~l~~p~~~~~~~~~i~fAGd~~ 344 (373)
++++++.++++|++++|. ..+|..+.+++|.+ +|+.+.+|+.........+..|++ +|||||+++
T Consensus 406 ~ee~~~~v~~~L~~~~g~---~~~p~~~~~~~w~~------~~p~~~~g~~~~~~~~~~~~~~~~------~l~~aG~~~ 470 (504)
T 1sez_A 406 RTELKEIVTSDLKQLLGA---EGEPTYVNHLYWSK------AFPLYGHNYDSVLDAIDKMEKNLP------GLFYAGNHR 470 (504)
T ss_dssp HHHHHHHHHHHHHHHHCB---CSCCSSEEEEEEEE------EEECCCTTHHHHHHHHHHHHHHST------TEEECCSSS
T ss_pred HHHHHHHHHHHHHHHhCC---CCCCeEEEEeECCC------CCCccCcCHHHHHHHHHHHHHhCC------CEEEEeecC
Confidence 999999999999999995 24688889999975 445555554211001122334544 799999998
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHhhCC
Q psy7654 345 NEHQYGTVNGAVETGWREADRILKSDP 371 (373)
Q Consensus 345 s~~~~g~veGA~~SG~~AA~~i~~~~~ 371 (373)
++ ++|+||+.||.+||++|++.+.
T Consensus 471 ~g---~~v~gai~sG~~aA~~il~~l~ 494 (504)
T 1sez_A 471 GG---LSVGKALSSGCNAADLVISYLE 494 (504)
T ss_dssp SC---SSHHHHHHHHHHHHHHHHHHHS
T ss_pred CC---CCHHHHHHHHHHHHHHHHHHHh
Confidence 74 5899999999999999998654
No 18
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.90 E-value=1.9e-23 Score=210.18 Aligned_cols=242 Identities=19% Similarity=0.238 Sum_probs=175.9
Q ss_pred ecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCc-EEEEeCCCcEEEcCEEEEcCCcccccccccccCC
Q psy7654 39 WKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANG-VLVTCADGSQYSADKVLITVSLGVFKSDLITFVP 117 (373)
Q Consensus 39 ~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~-v~v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p 117 (373)
.++||+++|+++|++.+. +.|++|++|++|++|++ ++++ |.|++.+ .++.||+||+|+|++.+.+ + .+
T Consensus 228 ~~~gG~~~l~~~l~~~l~-----~~g~~i~~~~~V~~i~~-~~~~~~~v~~~~-~~~~ad~vv~a~p~~~~~~--l--l~ 296 (477)
T 3nks_A 228 SLRGGLEMLPQALETHLT-----SRGVSVLRGQPVCGLSL-QAEGRWKVSLRD-SSLEADHVISAIPASVLSE--L--LP 296 (477)
T ss_dssp EETTCTTHHHHHHHHHHH-----HTTCEEECSCCCCEEEE-CGGGCEEEECSS-CEEEESEEEECSCHHHHHH--H--SC
T ss_pred EECCCHHHHHHHHHHHHH-----hcCCEEEeCCEEEEEEE-cCCceEEEEECC-eEEEcCEEEECCCHHHHHH--h--cc
Confidence 458999999999999987 56889999999999998 6666 8887744 4899999999999999876 2 24
Q ss_pred CCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCCCCCCCCcccccccCCCCccccccccccceeecCCCC
Q psy7654 118 PLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHDDKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQK 197 (373)
Q Consensus 118 ~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 197 (373)
.+++...++++++.|.++.+|.+.|++++|+.+ +++++.+..+... ++|
T Consensus 297 ~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~--~~g~l~~~~~~~~-----------------~~~------------ 345 (477)
T 3nks_A 297 AEAAPLARALSAITAVSVAVVNLQYQGAHLPVQ--GFGHLVPSSEDPG-----------------VLG------------ 345 (477)
T ss_dssp GGGHHHHHHHHTCCEEEEEEEEEEETTCCCSSC--SSEEECCTTTCSS-----------------EEE------------
T ss_pred ccCHHHHHHHhcCCCCcEEEEEEEECCCCCCCC--CceEEccCCCCCC-----------------ceE------------
Confidence 455667788999999999999999999999643 5666643221100 011
Q ss_pred CCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeecCCCCceEEEEecchhhHHhh----cCCHHHHHHHHH
Q psy7654 198 WWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLTTEDPLTFLGWISGASARFME----TLSDEQIKTESM 273 (373)
Q Consensus 198 ~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~----~ls~e~~~~~~~ 273 (373)
..|.+..+.....+.+..+|++++++..+..+. .++++++++.++
T Consensus 346 -------------------------------~~~~s~~~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 394 (477)
T 3nks_A 346 -------------------------------IVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQ 394 (477)
T ss_dssp -------------------------------EECHHHHCGGGSTTTTCEEEEEEECHHHHHHHHHSSCCCCHHHHHHHHH
T ss_pred -------------------------------EEEeccccCCCCCCCCceEEEEEECCccccccccccCCCCHHHHHHHHH
Confidence 011111111111011356788899887776654 469999999999
Q ss_pred HHHHHHhCCCCCCCCCceEEeccCCCCCccccccccccccCCccccchHhhcccccCCCCCceEEEeccccCCCCcchhh
Q psy7654 274 KAFRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASRHDLEAPLSNGQGKQVLLFAGEASNEHQYGTVN 353 (373)
Q Consensus 274 ~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~~~l~~p~~~~~~~~~i~fAGd~~s~~~~g~ve 353 (373)
++|++++|. .++|....+++|.. +++.+.+|+.. ....+...+.. ..++|++||+++.+. .|+
T Consensus 395 ~~L~~~~g~---~~~~~~~~v~rw~~------a~p~~~~g~~~---~~~~~~~~l~~--~~~~l~l~G~~~~G~---gv~ 457 (477)
T 3nks_A 395 EAAATQLGL---KEMPSHCLVHLHKN------CIPQYTLGHWQ---KLESARQFLTA--HRLPLTLAGASYEGV---AVN 457 (477)
T ss_dssp HHHHHHHCC---CSCCSEEEEEEEEE------EEECCBTTHHH---HHHHHHHHHHH--TTCSEEECSTTTSCC---SHH
T ss_pred HHHHHHhCC---CCCCcEEEEEEcCC------ccCCCCCCHHH---HHHHHHHHHHh--cCCCEEEEccCCCCC---cHH
Confidence 999999996 35788899999985 77888887642 22233222210 013799999998753 599
Q ss_pred HHHHHHHHHHHHHHhhC
Q psy7654 354 GAVETGWREADRILKSD 370 (373)
Q Consensus 354 GA~~SG~~AA~~i~~~~ 370 (373)
+|+.||++||++|++.-
T Consensus 458 ~a~~sg~~aA~~il~~~ 474 (477)
T 3nks_A 458 DCIESGRQAAVSVLGTE 474 (477)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999999754
No 19
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.80 E-value=3.3e-20 Score=164.68 Aligned_cols=115 Identities=20% Similarity=0.195 Sum_probs=100.2
Q ss_pred ceEEEEecchhhHHhhcCCHHHHHHHHHHHHHHHhCCCCCCCCCceE--EeccCCCCCccccccccccccCCccccchHh
Q psy7654 246 LTFLGWISGASARFMETLSDEQIKTESMKAFRFFLGANYTIPEPSRV--FHSSWGTNKHFKGSYSIYTLTTDKMNASRHD 323 (373)
Q Consensus 246 ~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~L~~~~g~~~~~~~~~~~--~~~~W~~dp~~~G~~~~~~~g~~~~~~~~~~ 323 (373)
.+|++|++++.|.++..++++++++.++++|+++||. +...+..+ ..++|.+|||++|+|+.+.||+.. ...+.
T Consensus 37 ~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~--~~~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~--~~~~~ 112 (181)
T 2e1m_C 37 VVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGR--RIEVFYTGAGQTQSWLRDPYACGEAAVYTPHQMT--AFHLD 112 (181)
T ss_dssp EEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCG--GGGGTEEEEEEEEESSSCTTTSSSEECCCTTHHH--HHHHH
T ss_pred EEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCC--CcHhhccCcceecccCCCCCCCCcccCcCCCchH--HHHHH
Confidence 4788899999999999999999999999999999985 34333367 899999999999999998898753 35678
Q ss_pred hcccccCCCCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhCC
Q psy7654 324 LEAPLSNGQGKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSDP 371 (373)
Q Consensus 324 l~~p~~~~~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~~ 371 (373)
|.+|.+ |||||||+++. ++||||||++||+|||.+|++.+.
T Consensus 113 l~~p~g------rl~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l~ 153 (181)
T 2e1m_C 113 VVRPEG------PVYFAGEHVSL-KHAWIEGAVETAVRAAIAVNEAPV 153 (181)
T ss_dssp HHSCBT------TEEECSGGGTT-STTSHHHHHHHHHHHHHHHHTCCC
T ss_pred HhCCCC------cEEEEEHHHcC-CccCHHHHHHHHHHHHHHHHHHhc
Confidence 888875 89999999996 899999999999999999998764
No 20
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.80 E-value=9.4e-19 Score=173.16 Aligned_cols=261 Identities=11% Similarity=0.042 Sum_probs=172.0
Q ss_pred hhhhccCCchhhcchhhhhhhhc---cCCcceeeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE
Q psy7654 8 QNSLDASDSWFETSAKRYNSFVT---HEGCEDTVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV 84 (373)
Q Consensus 8 ~~~~~~g~~~~~~S~~~~~~~~~---~~g~~~~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v 84 (373)
.+....|.+.+++|+..+...+. ..|.. .+++||+++|+++|++.+. ++|++|++|++|++|.. ++++|
T Consensus 158 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~--~~~~gG~~~l~~~l~~~~~-----~~G~~i~~~~~V~~i~~-~~~~~ 229 (425)
T 3ka7_A 158 FCGWALSLKSDEVPVEEVFEIIENMYRFGGT--GIPEGGCKGIIDALETVIS-----ANGGKIHTGQEVSKILI-ENGKA 229 (425)
T ss_dssp HHHHHHSSCGGGSBHHHHHHHHHHHHHHCSC--EEETTSHHHHHHHHHHHHH-----HTTCEEECSCCEEEEEE-ETTEE
T ss_pred HHHHHhCCCcccchHHHHHHHHHHHHhcCCc--cccCCCHHHHHHHHHHHHH-----HcCCEEEECCceeEEEE-ECCEE
Confidence 34444577889999976654332 12222 2358999999999999987 67899999999999998 67777
Q ss_pred E-EEeCCCcEEEcCEEEEcCCcccccccccccCCCC--CHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCC
Q psy7654 85 L-VTCADGSQYSADKVLITVSLGVFKSDLITFVPPL--PPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHD 161 (373)
Q Consensus 85 ~-v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~L--p~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~ 161 (373)
. |++. |+++.||+||+|+|+..+.++ +...+.+ |....+.++++.+++..+|.+.|++++|.. .+++++.+
T Consensus 230 ~gv~~~-g~~~~ad~VV~a~~~~~~~~l-l~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~----~~~~~~~~ 303 (425)
T 3ka7_A 230 AGIIAD-DRIHDADLVISNLGHAATAVL-CSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGH----TGVLLTPY 303 (425)
T ss_dssp EEEEET-TEEEECSEEEECSCHHHHHHH-TTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCS----SSEEECCS
T ss_pred EEEEEC-CEEEECCEEEECCCHHHHHHh-cCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCc----CEEEECCC
Confidence 6 6664 778999999999999988762 2222334 777888899999999999999999987632 22222221
Q ss_pred CCCCCCcccccccCCCCccccccccccceeecCCCCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeec
Q psy7654 162 DKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLT 241 (373)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~ 241 (373)
.. ++ .+. .+.+...+.. .
T Consensus 304 ~~--~~----------------~~~-------------------------------------------~~~s~~~p~~-a 321 (425)
T 3ka7_A 304 TR--RI----------------NGV-------------------------------------------NEVTQADPEL-A 321 (425)
T ss_dssp SS--SE----------------EEE-------------------------------------------ECGGGTCGGG-S
T ss_pred hh--hc----------------ceE-------------------------------------------EeccCCCCCc-C
Confidence 10 00 000 0111111111 1
Q ss_pred CCCCceEEEEecchhhHHhhcCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEeccCCCCCccccccccccccCCccccch
Q psy7654 242 TEDPLTFLGWISGASARFMETLSDEQIKTESMKAFRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASR 321 (373)
Q Consensus 242 ~~~~~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~ 321 (373)
+.+..++..++.... ... .. +++.++.++++|++++|. . .+.-..+++|.. +++.+.+|+.. .
T Consensus 322 p~G~~~l~~~~~~~~-~~~-~~-~~~~~~~~~~~l~~~~p~--~--~~~~~~v~~~~~------~~P~~~~~~~~----~ 384 (425)
T 3ka7_A 322 PPGKHLTMCHQYVAP-ENV-KN-LESEIEMGLEDLKEIFPG--K--RYEVLLIQSYHD------EWPVNRAASGT----D 384 (425)
T ss_dssp CTTCEEEEEEEEECG-GGG-GG-HHHHHHHHHHHHHHHSTT--C--CEEEEEEEEEBT------TBCSBSSCTTC----C
T ss_pred CCCCeEEEEEecccc-ccc-cc-hHHHHHHHHHHHHHhCCC--C--ceEEEEEEEECC------CccccccccCC----C
Confidence 334456655544322 111 12 245579999999999974 2 334456777875 56777777532 2
Q ss_pred HhhcccccCCCCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHH
Q psy7654 322 HDLEAPLSNGQGKQVLLFAGEASNEHQYGTVNGAVETGWREADRIL 367 (373)
Q Consensus 322 ~~l~~p~~~~~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~ 367 (373)
.....|+ ++||+|||++.+.+.-.|+||+.||.+||++|+
T Consensus 385 ~~~~~p~------~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 385 PGNETPF------SGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp CCSBCSS------BTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred CCCCCCc------CCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 2223343 379999999998766689999999999999986
No 21
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.73 E-value=4e-16 Score=149.11 Aligned_cols=220 Identities=17% Similarity=0.192 Sum_probs=158.0
Q ss_pred CCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEE-cCEEEEcCCcccccccccccCCCC
Q psy7654 41 KGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYS-ADKVLITVSLGVFKSDLITFVPPL 119 (373)
Q Consensus 41 ~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~-ad~VIvtiP~~~l~~~~i~f~p~L 119 (373)
.+|+..|.++|++. .+|+++++|++|+. ++++|.|++.+|+... +|+||+|+|...+.+. +.+ .
T Consensus 106 ~~~~~~l~~~l~~g----------~~i~~~~~v~~i~~-~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~-~~~---~ 170 (336)
T 1yvv_A 106 KPGMSAITRAMRGD----------MPVSFSCRITEVFR-GEEHWNLLDAEGQNHGPFSHVIIATPAPQASTL-LAA---A 170 (336)
T ss_dssp SSCTHHHHHHHHTT----------CCEECSCCEEEEEE-CSSCEEEEETTSCEEEEESEEEECSCHHHHGGG-GTT---C
T ss_pred CccHHHHHHHHHcc----------CcEEecCEEEEEEE-eCCEEEEEeCCCcCccccCEEEEcCCHHHHHHh-hcc---C
Confidence 67999999999874 46999999999999 7888999999987664 9999999999987662 122 2
Q ss_pred CHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCCCCCCCCcccccccCCCCccccccccccceeecCCCCCC
Q psy7654 120 PPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHDDKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQKWW 199 (373)
Q Consensus 120 p~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 199 (373)
+....++..+.|.++.++.+.|+.++|... .++ +. .. . |+
T Consensus 171 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-~~-~---~~-------------------------------- 210 (336)
T 1yvv_A 171 -PKLASVVAGVKMDPTWAVALAFETPLQTPM-QGC-FV-QD-S---PL-------------------------------- 210 (336)
T ss_dssp -HHHHHHHTTCCEEEEEEEEEEESSCCSCCC-CEE-EE-CS-S---SE--------------------------------
T ss_pred -HHHHHHHhhcCccceeEEEEEecCCCCCCC-CeE-Ee-CC-C---ce--------------------------------
Confidence 344577899999999999999999988542 222 11 10 0 00
Q ss_pred CCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeecCC--CC-ceEEEEecchhhHHhhcCCHHHHHHHHHHHH
Q psy7654 200 PDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLTTE--DP-LTFLGWISGASARFMETLSDEQIKTESMKAF 276 (373)
Q Consensus 200 ~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~~~--~~-~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~L 276 (373)
.|. ++....+. .. ..++.+..++.+..+..++++++.++++++|
T Consensus 211 ------------------------------~~l---~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l 257 (336)
T 1yvv_A 211 ------------------------------DWL---ARNRSKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAF 257 (336)
T ss_dssp ------------------------------EEE---EEGGGSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred ------------------------------eEE---EecCcCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHH
Confidence 111 00000011 11 2566667777788888999999999999999
Q ss_pred HHHhCCCCCCCCCceEEeccCCCCCccccccccccccCCccccchHhhcccccCCCCCceEEEeccccCCCCcchhhHHH
Q psy7654 277 RFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASRHDLEAPLSNGQGKQVLLFAGEASNEHQYGTVNGAV 356 (373)
Q Consensus 277 ~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~~~l~~p~~~~~~~~~i~fAGd~~s~~~~g~veGA~ 356 (373)
.+++|. ..+.|.....++|.. +++.+..+.. .+..+. +||+||||++.+ +.||+|+
T Consensus 258 ~~~lg~--~~~~p~~~~~~rw~~------a~~~~~~~~~-------~~~~~~------~rl~laGDa~~g---~gv~~a~ 313 (336)
T 1yvv_A 258 AELIDC--TMPAPVFSLAHRWLY------ARPAGAHEWG-------ALSDAD------LGIYVCGDWCLS---GRVEGAW 313 (336)
T ss_dssp HTTCSS--CCCCCSEEEEEEEEE------EEESSCCCCS-------CEEETT------TTEEECCGGGTT---SSHHHHH
T ss_pred HHHhCC--CCCCCcEEEccccCc------cCCCCCCCCC-------eeecCC------CCEEEEecCCCC---CCHHHHH
Confidence 999996 455678888999973 2222222211 112222 389999999975 5899999
Q ss_pred HHHHHHHHHHHhhCCC
Q psy7654 357 ETGWREADRILKSDPA 372 (373)
Q Consensus 357 ~SG~~AA~~i~~~~~~ 372 (373)
+||.++|++|++.+..
T Consensus 314 ~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 314 LSGQEAARRLLEHLQL 329 (336)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhh
Confidence 9999999999987654
No 22
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.72 E-value=4.5e-17 Score=164.81 Aligned_cols=259 Identities=14% Similarity=0.163 Sum_probs=167.7
Q ss_pred cCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcccccccccccCCCC
Q psy7654 40 KKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGVFKSDLITFVPPL 119 (373)
Q Consensus 40 ~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~L 119 (373)
.+||+++|+++|++.|. +.|++|++|++|++|.. ++++ +++.+|+++.||+||+|+|+..+.. + +.
T Consensus 217 ~~gG~~~l~~~l~~~l~-----~~g~~i~~~~~V~~I~~-~~~~--v~~~~G~~~~ad~vI~t~P~~~l~~--~-l~--- 282 (513)
T 4gde_A 217 ARGGTGGIWIAVANTLP-----KEKTRFGEKGKVTKVNA-NNKT--VTLQDGTTIGYKKLVSTMAVDFLAE--A-MN--- 282 (513)
T ss_dssp SSSHHHHHHHHHHHTSC-----GGGEEESGGGCEEEEET-TTTE--EEETTSCEEEEEEEEECSCHHHHHH--H-TT---
T ss_pred ccCCHHHHHHHHHHHHH-----hcCeeeecceEEEEEEc-cCCE--EEEcCCCEEECCEEEECCCHHHHHH--h-cC---
Confidence 48999999999999998 67899999999999998 5655 4567899999999999999998876 2 22
Q ss_pred CHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCCCCCCCCcccccccCCCCccccccccccceeecCCCCCC
Q psy7654 120 PPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHDDKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQKWW 199 (373)
Q Consensus 120 p~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 199 (373)
+.....+.+.+.|.++..|.|.++........+...+..++.+ .|+. ++ . + ...|.
T Consensus 283 ~~~~~~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~--~~f~---Ri---------------~---~-~~n~s 338 (513)
T 4gde_A 283 DQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDN--CPFY---RA---------------T---I-FSNYS 338 (513)
T ss_dssp CHHHHHHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTT--CSCS---EE---------------E---C-GGGTC
T ss_pred chhhHhhhhcccCCceEEEEEEEeccccccccccceeeccCCC--Ccee---EE---------------E---e-cCCCC
Confidence 2445677889999999999999987654433222222222211 1110 00 0 0 01111
Q ss_pred CCCC-CCCCccccCCCCCCcccccccccCCCcceeeeeeeeecCCCCceEEEEecchhhHHhhcCCHHHHHHHHHHHHHH
Q psy7654 200 PDDV-RGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLTTEDPLTFLGWISGASARFMETLSDEQIKTESMKAFRF 278 (373)
Q Consensus 200 ~~~~-~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~L~~ 278 (373)
|.-. .+...+ ....|.+..+.... +.....+.+++.+.....+..+++|++++.++++|.+
T Consensus 339 p~~~p~~~~~~-----------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~ 400 (513)
T 4gde_A 339 PYNQPEASAAL-----------------PTMQLADGSRPQST-EAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVN 400 (513)
T ss_dssp GGGSCCTTCCE-----------------ECCEETTSCCCSCC-SEECCCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHH
T ss_pred cccCCCCCceE-----------------EEEEeccCCCcccc-cCCcceEEEEEecccchhccCCCHHHHHHHHHHHHHH
Confidence 1110 010000 00111111111111 2223456777666555667889999999999999999
Q ss_pred HhCCCCCCCCCceEEeccCCCCCccccccccccccCCccccchHhhcccccCCCCCceEEEeccccCCCCc-chhhHHHH
Q psy7654 279 FLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASRHDLEAPLSNGQGKQVLLFAGEASNEHQY-GTVNGAVE 357 (373)
Q Consensus 279 ~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~~~l~~p~~~~~~~~~i~fAGd~~s~~~~-g~veGA~~ 357 (373)
+.+.+ ..+++....+.+|.+ +|+.+..|+.. ..+.+...+.. ++||++|-.-...+. +.|++|+.
T Consensus 401 ~~~i~-~~~~i~~~~v~r~~~------ayP~y~~~~~~---~~~~~~~~l~~----~~l~~~GR~g~~~Y~~~n~D~a~~ 466 (513)
T 4gde_A 401 TEMLK-PTDEIVSTYHRRFDH------GYPTPTLEREG---TLTQILPKLQD----KDIWSRGRFGSWRYEVGNQDHSFM 466 (513)
T ss_dssp TTSSC-TTCEEEEEEEEEEEE------EEECCBTTHHH---HHHHHHHHHHH----TTEEECSTTTTCCGGGCSHHHHHH
T ss_pred hcCCC-CccceEEEEEEECCC------eecccCHhHHH---HHHHHHHHHhh----cCcEEecCCcccCcCCCCHHHHHH
Confidence 98863 344567888899975 78888877643 23333322221 279999954333332 68999999
Q ss_pred HHHHHHHHHHh
Q psy7654 358 TGWREADRILK 368 (373)
Q Consensus 358 SG~~AA~~i~~ 368 (373)
||..||++|++
T Consensus 467 ~g~~aa~~I~~ 477 (513)
T 4gde_A 467 LGVEAVDNIVN 477 (513)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHc
Confidence 99999999986
No 23
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.71 E-value=1.7e-16 Score=157.34 Aligned_cols=249 Identities=14% Similarity=0.080 Sum_probs=156.4
Q ss_pred hhhccCCchhhcchhhhhhhhcc---CCcceeeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEE
Q psy7654 9 NSLDASDSWFETSAKRYNSFVTH---EGCEDTVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVL 85 (373)
Q Consensus 9 ~~~~~g~~~~~~S~~~~~~~~~~---~g~~~~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~ 85 (373)
+....|.+..++|+..+...... .+.. .+++||+++|+++|++.+. ++|++|++|++|++|.. ++++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~gG~~~l~~~l~~~~~-----~~G~~i~~~~~V~~i~~-~~~~v- 222 (421)
T 3nrn_A 152 AGWADSVSLSDLTALELAKEIRAALRWGGP--GLIRGGCKAVIDELERIIM-----ENKGKILTRKEVVEINI-EEKKV- 222 (421)
T ss_dssp HHHHHSSCGGGSBHHHHHHHHHHHHHHCSC--EEETTCHHHHHHHHHHHHH-----TTTCEEESSCCEEEEET-TTTEE-
T ss_pred HHHhcCCCcccCCHHHHHHHHHHHhhcCCc--ceecCCHHHHHHHHHHHHH-----HCCCEEEcCCeEEEEEE-ECCEE-
Confidence 33445777889998766553321 1222 2358999999999999987 67899999999999998 78888
Q ss_pred EEeCCCcEEEcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCCCCCC
Q psy7654 86 VTCADGSQYSADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHDDKKN 165 (373)
Q Consensus 86 v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~~~~~ 165 (373)
|+ .+|+++.||+||+|+|+..+.+ +.-.+.+|....+.++++.+.+..+|.+.++++... ..++++..+..
T Consensus 223 V~-~~g~~~~ad~Vv~a~~~~~~~~--ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~----~~~~~~~~~~~-- 293 (421)
T 3nrn_A 223 YT-RDNEEYSFDVAISNVGVRETVK--LIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRI----GNTIVFTPGLM-- 293 (421)
T ss_dssp EE-TTCCEEECSEEEECSCHHHHHH--HHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSS----CSSEEECTTSS--
T ss_pred EE-eCCcEEEeCEEEECCCHHHHHH--hcCcccCCHHHHHHHhCCCCCceEEEEEEEcCCccc----CCeEEEcCCcc--
Confidence 64 4667899999999999998876 211245777778889999999999999999987432 22223221100
Q ss_pred CCcccccccCCCCccccccccccceeecCCCCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeecCCCC
Q psy7654 166 PLFKDTAVVDGAPWISLFLGTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLTTEDP 245 (373)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~~~~~ 245 (373)
+ .+ ..+.+...+.. .+.+.
T Consensus 294 -~----------------~~-------------------------------------------i~~~s~~~p~~-ap~G~ 312 (421)
T 3nrn_A 294 -I----------------NG-------------------------------------------FNEPSALDKSL-AREGY 312 (421)
T ss_dssp -S----------------CE-------------------------------------------EECGGGTCGGG-SCTTE
T ss_pred -e----------------ee-------------------------------------------EeccCCCCCCc-CCCCc
Confidence 0 00 00000000001 12233
Q ss_pred ceEEEEecchhhHHhhcCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEeccCCCCCccccccccccccCCccccchHhhc
Q psy7654 246 LTFLGWISGASARFMETLSDEQIKTESMKAFRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASRHDLE 325 (373)
Q Consensus 246 ~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~~~l~ 325 (373)
.++.++..- ...++++.++.++++|++++| . .++ ..+++|.. +++.+.+.... ..+ .
T Consensus 313 ~~~~~~~~~------~~~~~~~~~~~~~~~L~~~~p-~---~~~--~~~~~~~~------~~p~~~~~~~~---~~~--~ 369 (421)
T 3nrn_A 313 TLIMAHMAL------KNGNVKKAIEKGWEELLEIFP-E---GEP--LLAQVYRD------GNPVNRTRAGL---HIE--W 369 (421)
T ss_dssp EEEEEEEEC------TTCCHHHHHHHHHHHHHHHCT-T---CEE--EEEEEC----------------------CCC--C
T ss_pred eEEEEEEee------ccccHHHHHHHHHHHHHHHcC-C---CeE--EEeeeccC------CCCcccccCCC---CCC--C
Confidence 344444321 123445669999999999998 2 233 34566764 34443221100 011 1
Q ss_pred ccccCCCCCceEEEeccccCCCCcchhhHHHHHHHHHHHHH
Q psy7654 326 APLSNGQGKQVLLFAGEASNEHQYGTVNGAVETGWREADRI 366 (373)
Q Consensus 326 ~p~~~~~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i 366 (373)
. . ++||+|||++.+.+.-.||||+.||.+||++|
T Consensus 370 ~------~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 370 P------L-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp C------C-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred C------C-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 2 2 48999999998753337799999999999998
No 24
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.68 E-value=4e-16 Score=158.29 Aligned_cols=266 Identities=13% Similarity=0.119 Sum_probs=172.0
Q ss_pred hccCCchhhcchhhhhhhhcc--------------C----Ccc-eeee-cCCcHHHHHHHHHHhCCCCCCCCCCceEEcC
Q psy7654 11 LDASDSWFETSAKRYNSFVTH--------------E----GCE-DTVW-KKGGYGNVLKLLLKQMPGQTPIDLGKKLLLN 70 (373)
Q Consensus 11 ~~~g~~~~~~S~~~~~~~~~~--------------~----g~~-~~~~-~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln 70 (373)
-.+|.+.+++|+.++...+.. . |.. .+.+ .+||+++|+++|++.+.. .+|++|
T Consensus 162 ~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~~l~~~la~~l~~-------~~i~~~ 234 (484)
T 4dsg_A 162 KVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTGIIYQAIKEKLPS-------EKLTFN 234 (484)
T ss_dssp HHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTHHHHHHHHHHSCG-------GGEEEC
T ss_pred hhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHHHHHHHHHhhhhh-------CeEEEC
Confidence 445778999999875442210 0 111 1223 369999999999999962 379999
Q ss_pred --CceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCC
Q psy7654 71 --KEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWP 148 (373)
Q Consensus 71 --~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~ 148 (373)
++|++|.. .+++|. +.+|+++.||+||+|+|++.+..+.....+.+|+...++++.+.|.++.+|.+.|+.+.-.
T Consensus 235 ~~~~V~~I~~-~~~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~ 311 (484)
T 4dsg_A 235 SGFQAIAIDA-DAKTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPP 311 (484)
T ss_dssp GGGCEEEEET-TTTEEE--ETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCG
T ss_pred CCceeEEEEe-cCCEEE--ECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcc
Confidence 56999998 677664 4678889999999999999987721112345788888899999999999999999986321
Q ss_pred CCCCceeEEecCCCCCCCCcccccccCCCCccccccccccceeecCCCCCCCCCCCCCCccccCCCCCCcccccccccCC
Q psy7654 149 DDIRGYNFFWTHDDKKNPLFKDTAVVDGAPWISLFLGTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDG 228 (373)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~ 228 (373)
+..++..+++++.+. ++. ..+.| ..|||.
T Consensus 312 ~~~~~~~i~vp~~~~--~~~---------------------ri~~~-s~~~p~--------------------------- 340 (484)
T 4dsg_A 312 HLKTACWLYFPEDTS--PFY---------------------RATVF-SNYSKY--------------------------- 340 (484)
T ss_dssp GGTTCCEEECCSTTC--SCS---------------------EEECG-GGTCGG---------------------------
T ss_pred cCCCCeEEEEEcCCC--eEE---------------------EEEee-cCCCcc---------------------------
Confidence 112344444332221 010 00000 011110
Q ss_pred CcceeeeeeeeecCCCCceEEEEecchhhHHhhcCCHHHHHHHHHHHHHHHhCCCCCCCCC-ceEEeccCCCCCcccccc
Q psy7654 229 APWIVDLYGFYLTTEDPLTFLGWISGASARFMETLSDEQIKTESMKAFRFFLGANYTIPEP-SRVFHSSWGTNKHFKGSY 307 (373)
Q Consensus 229 ~~w~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~ls~e~~~~~~~~~L~~~~g~~~~~~~~-~~~~~~~W~~dp~~~G~~ 307 (373)
..+++..+++..+... ....++++++++.++++|.++.+.+ ..++ ....+++|.. +|
T Consensus 341 -----------~ap~g~~~l~~e~~~~---~~~~~~d~~l~~~a~~~L~~~~~~~--~~~~~~~~~v~r~~~------~y 398 (484)
T 4dsg_A 341 -----------NVPEGHWSLMLEVSES---KYKPVNHSTLIEDCIVGCLASNLLL--PEDLLVSKWHYRIEK------GY 398 (484)
T ss_dssp -----------GSCTTEEEEEEEEEEB---TTBCCCTTSHHHHHHHHHHHTTSCC--TTCCEEEEEEEEEEE------EE
T ss_pred -----------cCCCCeEEEEEEEecC---cCCcCCHHHHHHHHHHHHHHcCCCC--ccceEEEEEEEEeCc------cc
Confidence 0122233555544322 2446799999999999999987642 1233 3456788874 89
Q ss_pred ccccccCCccccchHhhcccccCCCCCceEEEeccccCCCCc--chhhHHHHHHHHHHHHHH
Q psy7654 308 SIYTLTTDKMNASRHDLEAPLSNGQGKQVLLFAGEASNEHQY--GTVNGAVETGWREADRIL 367 (373)
Q Consensus 308 ~~~~~g~~~~~~~~~~l~~p~~~~~~~~~i~fAGd~~s~~~~--g~veGA~~SG~~AA~~i~ 367 (373)
+.+.+|+.. ..+.+...+.. . +|+++|..-... + .-|+.|+.||.+||++|+
T Consensus 399 P~y~~~~~~---~~~~~~~~l~~---~-~l~~~Gr~g~~~-y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 399 PTPFIGRNN---LLEKAQPELMS---R-CIYSRGRFGAWR-YEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp ECCBTTHHH---HHHHHHHHHHH---T-TEEECSTTTTCC-GGGCSHHHHHHHHHHHHHHHT
T ss_pred cCCCccHHH---HHHHHHHHHHh---C-CcEeecCCcccc-cCCCChHHHHHHHHHHHHHHH
Confidence 999888643 23333333321 1 699999964443 3 359999999999999998
No 25
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.61 E-value=2.1e-15 Score=152.40 Aligned_cols=132 Identities=17% Similarity=0.258 Sum_probs=77.7
Q ss_pred hhhhhhccCCchhhcchhhhhhhhccCCcceeeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEE
Q psy7654 6 KAQNSLDASDSWFETSAKRYNSFVTHEGCEDTVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVL 85 (373)
Q Consensus 6 ~~~~~~~~g~~~~~~S~~~~~~~~~~~g~~~~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~ 85 (373)
.+.+.+.++.+....++..++.+....++. .+++||+++|+++|++.+. ++|++|++|++|++|.. +++++.
T Consensus 184 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~G~--~~p~GG~~~l~~aL~~~~~-----~~Gg~I~~~~~V~~I~~-~~~~~~ 255 (501)
T 4dgk_A 184 SFHSLLVGGNPFATSSIYTLIHALEREWGV--WFPRGGTGALVQGMIKLFQ-----DLGGEVVLNARVSHMET-TGNKIE 255 (501)
T ss_dssp HHHHHHHHSCC--CCCTHHHHHHHHSCCCE--EEETTHHHHHHHHHHHHHH-----HTTCEEECSCCEEEEEE-ETTEEE
T ss_pred hhhhcccCCCcchhhhhhhhhhhhhccCCe--EEeCCCCcchHHHHHHHHH-----HhCCceeeecceeEEEe-eCCeEE
Confidence 344455555554444444444444333322 2469999999999999997 78999999999999999 777765
Q ss_pred -EEeCCCcEEEcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCcc-eeEEEEEcCCCC
Q psy7654 86 -VTCADGSQYSADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGT-VDKVFVRFPQKW 146 (373)
Q Consensus 86 -v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~-~~kv~l~~~~~~ 146 (373)
|++.+|+++.||+||+++++..+...++.- .+++....+.++...+++ ..++++.++.+.
T Consensus 256 gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~ 317 (501)
T 4dgk_A 256 AVHLEDGRRFLTQAVASNADVVHTYRDLLSQ-HPAAVKQSNKLQTKRMSNSLFVLYFGLNHHH 317 (501)
T ss_dssp EEEETTSCEEECSCEEECCC----------------------------CCEEEEEEEEESSCC
T ss_pred EEEecCCcEEEcCEEEECCCHHHHHHHhccc-cccchhhhhhhhccccCCceeEEEecccCCc
Confidence 889999999999999999887654422222 224444455666676644 667888888764
No 26
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.57 E-value=3e-14 Score=140.97 Aligned_cols=243 Identities=12% Similarity=0.121 Sum_probs=148.3
Q ss_pred chhhcchhhhhhhhcc-------CCcceeeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEe
Q psy7654 16 SWFETSAKRYNSFVTH-------EGCEDTVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTC 88 (373)
Q Consensus 16 ~~~~~S~~~~~~~~~~-------~g~~~~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~ 88 (373)
+.+++|+..++.|... .|... ..+||+++|+++|++.+. .+|++|++|++|.. ++++|.|++
T Consensus 172 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~l~~~l~~~l~--------~~v~~~~~V~~i~~-~~~~v~v~~ 240 (424)
T 2b9w_A 172 HFDNVPAAYVLKYLDFVTMMSFAKGDLW--TWADGTQAMFEHLNATLE--------HPAERNVDITRITR-EDGKVHIHT 240 (424)
T ss_dssp CTTTSBHHHHHHHSCHHHHHHHHHTCCB--CCTTCHHHHHHHHHHHSS--------SCCBCSCCEEEEEC-CTTCEEEEE
T ss_pred ChHhcCHHHHHHhhhHhhhhcccCCceE--EeCChHHHHHHHHHHhhc--------ceEEcCCEEEEEEE-ECCEEEEEE
Confidence 3578888776655431 22221 248999999999999886 57999999999998 777899998
Q ss_pred CCCcEEEcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCccee-EEEEEcCCCCCCCCCCceeEEecCCCCCCCC
Q psy7654 89 ADGSQYSADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGTVD-KVFVRFPQKWWPDDIRGYNFFWTHDDKKNPL 167 (373)
Q Consensus 89 ~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~-kv~l~~~~~~W~~~~~~~~~~~~~~~~~~~~ 167 (373)
.+| ++.||+||+|+|+..+.. +.|++|.++ +.+..+.+.++. ++.+...-+.| ..+.+.....
T Consensus 241 ~~g-~~~ad~Vv~a~~~~~~~~----~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~--- 304 (424)
T 2b9w_A 241 TDW-DRESDVLVLTVPLEKFLD----YSDADDDER-EYFSKIIHQQYMVDACLVKEYPTI-------SGYVPDNMRP--- 304 (424)
T ss_dssp SSC-EEEESEEEECSCHHHHTT----SBCCCHHHH-HHHTTCEEEEEEEEEEEESSCCSS-------EEECGGGGSG---
T ss_pred CCC-eEEcCEEEECCCHHHHhh----ccCCCHHHH-HHHhcCCcceeEEEEEEeccCCcc-------cccccCCCCC---
Confidence 888 589999999999997754 335555543 356777776643 33333222211 1121110000
Q ss_pred cccccccCCCCccccccccccceeecCCCCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeec-CCCCc
Q psy7654 168 FKDTAVVDGAPWISLFLGTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLT-TEDPL 246 (373)
Q Consensus 168 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~-~~~~~ 246 (373)
...|. ..| +.... .+...
T Consensus 305 ----------------------------------~~~g~----------------------~~~-----~~~~~~~~~~~ 323 (424)
T 2b9w_A 305 ----------------------------------ERLGH----------------------VMV-----YYHRWADDPHQ 323 (424)
T ss_dssp ----------------------------------GGTTS----------------------CCE-----EEECCTTCTTS
T ss_pred ----------------------------------cCCCc----------------------ceE-----EeeecCCCCce
Confidence 00010 011 11111 22235
Q ss_pred eEEEEecchhhHHhhcCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEeccCCCCCccccccccccccCCccccchHhhcc
Q psy7654 247 TFLGWISGASARFMETLSDEQIKTESMKAFRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASRHDLEA 326 (373)
Q Consensus 247 ~L~~~~~g~~a~~~~~ls~e~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~~~l~~ 326 (373)
++++|+.+.. ..+..++++++++.+++.|++ ++. +.+.+ +...+|...|... -..+..|+ ...+..
T Consensus 324 ~l~~~~~~~~-~~~~~~~~~~~~~~v~~~l~~-l~~--~~~~~--~~~~~w~~~p~~~--~~~~~~G~------~~~~~~ 389 (424)
T 2b9w_A 324 IITTYLLRNH-PDYADKTQEECRQMVLDDMET-FGH--PVEKI--IEEQTWYYFPHVS--SEDYKAGW------YEKVEG 389 (424)
T ss_dssp CEEEEEECCB-TTBCCCCHHHHHHHHHHHHHH-TTC--CEEEE--EEEEEEEEEEECC--HHHHHTTH------HHHHHH
T ss_pred EEEEEeccCC-CcccccChHHHHHHHHHHHHH-cCC--ccccc--ccccceeeeeccC--HHHHhccH------HHHHHH
Confidence 7788887643 456678899999999999998 664 21121 2234665322110 01111221 122222
Q ss_pred cccCCCCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHH
Q psy7654 327 PLSNGQGKQVLLFAGEASNEHQYGTVNGAVETGWREADRIL 367 (373)
Q Consensus 327 p~~~~~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~ 367 (373)
. ++.+++||||+++. .|++|+|++||.+||++|+
T Consensus 390 ~----~~~~~l~~aG~~~~---~g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 390 M----QGRRNTFYAGEIMS---FGNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp T----TTGGGEEECSGGGS---CSSHHHHHHHHHHHHHHHT
T ss_pred H----hCCCCceEeccccc---cccHHHHHHHHHHHHHHhc
Confidence 1 23358999999886 4899999999999999986
No 27
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.40 E-value=6.3e-15 Score=123.17 Aligned_cols=106 Identities=13% Similarity=0.224 Sum_probs=70.0
Q ss_pred cEEEcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCCCCCCceeEEecCCCCCCCCcccc
Q psy7654 92 SQYSADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWPDDIRGYNFFWTHDDKKNPLFKDT 171 (373)
Q Consensus 92 ~~~~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 171 (373)
++++||+||||+|+++++. |.|+|+||..+.+++++++|++..|+++.|+++||+++ +..+.
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~--I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~--~~~gd-------------- 65 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRF--VKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFT--EADWK-------------- 65 (130)
T ss_dssp EEEEESEEEECSCHHHHTT--SEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCC--HHHHH--------------
T ss_pred eEEEcCEEEEcCCHHHHhc--CcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCC--Ccccc--------------
Confidence 4789999999999999997 99999999999999999999999999999999999874 11000
Q ss_pred cccCCCCccccccccccceeecCCCCCCCCCCCCCCccccCCCCCCcccccccccCCCcceeeeeeeeecCCCCceEEEE
Q psy7654 172 AVVDGAPWISLFLGTVDKVFVRFPQKWWPDDVRGYNFFWTHDDEKNPLFKDTAVVDGAPWIVDLYGFYLTTEDPLTFLGW 251 (373)
Q Consensus 172 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~~~~~w~~~~~~~~~~~~~~~~L~~~ 251 (373)
. ...++.++++++|
T Consensus 66 -------------------------------------------------------------~-----s~~~~~pg~l~~f 79 (130)
T 2e1m_B 66 -------------------------------------------------------------R-----ELDAIAPGLYDYY 79 (130)
T ss_dssp -------------------------------------------------------------H-----HHHHHSTTHHHHH
T ss_pred -------------------------------------------------------------c-----cCCCCCCeEEEEe
Confidence 0 0001224588889
Q ss_pred e-cchhhHHhhcCCHHHHHHHHHHHHHHHhCC
Q psy7654 252 I-SGASARFMETLSDEQIKTESMKAFRFFLGA 282 (373)
Q Consensus 252 ~-~g~~a~~~~~ls~e~~~~~~~~~L~~~~g~ 282 (373)
+ +|++|.++..+++ +..+.++..|.++|+.
T Consensus 80 ~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~ 110 (130)
T 2e1m_B 80 QQWGEDDAEAALALP-QSVRNLPTGLLGAHPS 110 (130)
T ss_dssp HHHCCCSCCCC---------------------
T ss_pred cccCHHHHHHhcCCH-HHHHHHHHHHHHhCCC
Confidence 9 5999999999977 5667888899999983
No 28
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.82 E-value=8.1e-10 Score=109.01 Aligned_cols=106 Identities=15% Similarity=0.036 Sum_probs=75.6
Q ss_pred hhhccCCchhhcchhhhhhh---hccC-Ccc--ee-eecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCC
Q psy7654 9 NSLDASDSWFETSAKRYNSF---VTHE-GCE--DT-VWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDA 81 (373)
Q Consensus 9 ~~~~~g~~~~~~S~~~~~~~---~~~~-g~~--~~-~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~ 81 (373)
+.-.+|.+.+++|+..+... .... +.. .. .+++||+++|+++|++++ |++|++|++|++|+. .
T Consensus 162 ~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~--------g~~I~l~~~V~~I~~-~- 231 (399)
T 1v0j_A 162 TAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAADH--------RIEVRLNTDWFDVRG-Q- 231 (399)
T ss_dssp HHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHHHHHHHHHTCST--------TEEEECSCCHHHHHH-H-
T ss_pred HHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccHHHHHHHHHhcC--------CeEEEECCchhhhhh-h-
Confidence 33456788999999886321 1111 111 12 146899999999998754 479999999999976 2
Q ss_pred CcEEEEeCCCcEE-EcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCCC
Q psy7654 82 NGVLVTCADGSQY-SADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKWW 147 (373)
Q Consensus 82 ~~v~v~~~~G~~~-~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W 147 (373)
| + ++ .||+||+|+|+..+.. + .+..++|.++..+.+.++.+.+
T Consensus 232 --v-----~--~~~~aD~VI~t~p~~~l~~--~------------~l~~l~y~s~~~~~~~~~~~~~ 275 (399)
T 1v0j_A 232 --L-----R--PGSPAAPVVYTGPLDRYFD--Y------------AEGRLGWRTLDFEVEVLPIGDF 275 (399)
T ss_dssp --H-----T--TTSTTCCEEECSCHHHHTT--T------------TTCCCCEEEEEEEEEEESSSCS
T ss_pred --h-----h--hcccCCEEEECCcHHHHHh--h------------hhCCCCcceEEEEEEEEccccC
Confidence 2 1 34 6999999999998765 2 2457889988888988887643
No 29
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.21 E-value=1.7e-06 Score=84.22 Aligned_cols=107 Identities=14% Similarity=0.076 Sum_probs=74.2
Q ss_pred hhhhhhhccCCchhhcchhhhhhh---hccC-C--ccee-eecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEE
Q psy7654 5 GKAQNSLDASDSWFETSAKRYNSF---VTHE-G--CEDT-VWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKIN 77 (373)
Q Consensus 5 ~~~~~~~~~g~~~~~~S~~~~~~~---~~~~-g--~~~~-~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~ 77 (373)
++-.+.-.+|.+.+++|+..+... ...+ + .... .+++||+++|+++|++. ++|++|++|++|+
T Consensus 148 ~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~g----------~~i~l~~~V~~i~ 217 (367)
T 1i8t_A 148 IKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLEG----------VDVKLGIDFLKDK 217 (367)
T ss_dssp THHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHHHHHHHHHTT----------SEEECSCCGGGSH
T ss_pred HHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCHHHHHHHHhcC----------CEEEeCCceeeec
Confidence 333344555888999998876321 1111 1 1111 24689999999999972 5899999999886
Q ss_pred ecCCCcEEEEeCCCcEEEcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCCC
Q psy7654 78 WEDANGVLVTCADGSQYSADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKWW 147 (373)
Q Consensus 78 ~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W 147 (373)
. .| +..+|+||+|+|+..+.. + .+..+.|.++.-+.+.++.+..
T Consensus 218 ~----~v--------~~~~D~VV~a~p~~~~~~--~------------~l~~l~y~s~~~v~~~~d~~~~ 261 (367)
T 1i8t_A 218 D----SL--------ASKAHRIIYTGPIDQYFD--Y------------RFGALEYRSLKFETERHEFPNF 261 (367)
T ss_dssp H----HH--------HTTEEEEEECSCHHHHTT--T------------TTCCCCEEEEEEEEEEESSSCS
T ss_pred h----hh--------hccCCEEEEeccHHHHHH--H------------hhCCCCCceEEEEEEEeccccC
Confidence 4 22 135899999999987654 1 2456889999999999987643
No 30
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.19 E-value=3.2e-06 Score=82.77 Aligned_cols=98 Identities=17% Similarity=0.093 Sum_probs=69.8
Q ss_pred hhhhccCCchhhcchhhhhhh---hccC----CcceeeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceE-EEEec
Q psy7654 8 QNSLDASDSWFETSAKRYNSF---VTHE----GCEDTVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVT-KINWE 79 (373)
Q Consensus 8 ~~~~~~g~~~~~~S~~~~~~~---~~~~----g~~~~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~-~I~~~ 79 (373)
.+.-.+|.+.+++|+...... .... .+....+++||+++|+++|+++. |++|++|++|+ +|+.
T Consensus 155 ~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~--------g~~I~l~~~V~~~i~~- 225 (384)
T 2bi7_A 155 YTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGYTQMIKSILNHE--------NIKVDLQREFIVEERT- 225 (384)
T ss_dssp HHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHHHHHHHHHHCST--------TEEEEESCCCCGGGGG-
T ss_pred HHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCHHHHHHHHHhcC--------CCEEEECCeeehhhhc-
Confidence 344556888999998875211 1111 11111146899999999999743 47999999999 8854
Q ss_pred CCCcEEEEeCCCcEEEcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCcceeEEEEEcC
Q psy7654 80 DANGVLVTCADGSQYSADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGTVDKVFVRFP 143 (373)
Q Consensus 80 ~~~~v~v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~ 143 (373)
.+|+||+|+|+..+.. + .+..+.|.++.-+.+.++
T Consensus 226 ---------------~~d~VI~a~p~~~~~~--~------------~lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 226 ---------------HYDHVFYSGPLDAFYG--Y------------QYGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp ---------------GSSEEEECSCHHHHTT--T------------TTCCCCEEEEEEEEEEEE
T ss_pred ---------------cCCEEEEcCCHHHHHH--h------------hcCCCCcceEEEEEEEeC
Confidence 2899999999998765 2 134678888888888886
No 31
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.73 E-value=2.3e-05 Score=77.78 Aligned_cols=65 Identities=17% Similarity=0.191 Sum_probs=54.4
Q ss_pred eeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 37 TVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 37 ~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..+++||+++|+++|++.+. ++|++|++|++|++|.. .++++.....+|+++.||+||+|+|+..
T Consensus 226 ~~~p~gG~~~l~~~l~~~~~-----~~G~~i~~~~~V~~I~~-~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 226 YLYPLYGLGELPQGFARLSA-----IYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp EEEETTCTTHHHHHHHHHHH-----HHTCCCBCSCCCCEEEE-ETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred EEEeCcCHHHHHHHHHHHHH-----HcCCEEECCCEEEEEEE-eCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 34579999999999998876 66899999999999998 6777663334777899999999999874
No 32
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.49 E-value=0.0001 Score=74.28 Aligned_cols=68 Identities=24% Similarity=0.319 Sum_probs=54.5
Q ss_pred CcceeeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCc-EEEEeCCCcEEEcCEEEEcCCc
Q psy7654 33 GCEDTVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANG-VLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 33 g~~~~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~-v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
|...+.+++||++.|+++|++.+. .+|++|+++++|++|..+.+++ +.|.+.+|+++.||+||++...
T Consensus 244 g~s~~~yp~gG~~~L~~aL~r~~~-----~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~ 312 (475)
T 3p1w_A 244 GKSPFIYPLYGLGGIPEGFSRMCA-----INGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSY 312 (475)
T ss_dssp SSCSEEEETTCTTHHHHHHHHHHH-----HC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGG
T ss_pred CCCceEEECCCHHHHHHHHHHHHH-----HcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCc
Confidence 444556789999999999999887 7789999999999999723344 5688888888999999999854
No 33
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.47 E-value=0.00045 Score=60.76 Aligned_cols=93 Identities=22% Similarity=0.195 Sum_probs=61.7
Q ss_pred hhHHhhcCCHHHHHHHHHHHHHHHhCCCCCCCCCceEEeccCCCCCccccccccccccCCccccchHhhcccccCCCCCc
Q psy7654 256 SARFMETLSDEQIKTESMKAFRFFLGANYTIPEPSRVFHSSWGTNKHFKGSYSIYTLTTDKMNASRHDLEAPLSNGQGKQ 335 (373)
Q Consensus 256 ~a~~~~~ls~e~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~W~~dp~~~G~~~~~~~g~~~~~~~~~~l~~p~~~~~~~~ 335 (373)
...........+..+.....+....+. ..+.+.....++|.. +++..... ...+..+. +
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~w~~------a~~~~~~~-------~~~~~~~~------~ 295 (336)
T 3kkj_A 237 WSRQNLDASREQVIEHLHGAFAELIDC--TMPAPVFSLAHRWLY------ARPAGAHE-------WGALSDAD------L 295 (336)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHTTCSS--CCCCCSEEEEEEEEE------EEESSCCC-------CSSEEETT------T
T ss_pred cccccccccchhhhhhhhhhhhhhccC--CcCcchheeccceee------cccccccC-------ccceeeCC------C
Confidence 333444556667777777777777765 456788888888852 12111110 01112122 3
Q ss_pred eEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhCCC
Q psy7654 336 VLLFAGEASNEHQYGTVNGAVETGWREADRILKSDPA 372 (373)
Q Consensus 336 ~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~~~ 372 (373)
|||+|||++.+ +.|++|+.||..||+.|++.|+.
T Consensus 296 ~v~l~GDa~~g---~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 296 GIYVCGDWCLS---GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TEEECCGGGTT---SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CEEEEecccCC---cCHHHHHHHHHHHHHHHHHHhhc
Confidence 89999999875 36999999999999999998864
No 34
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.40 E-value=0.00041 Score=72.24 Aligned_cols=88 Identities=10% Similarity=0.071 Sum_probs=65.9
Q ss_pred eeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCC--CcEE-EEeCCCcEEEcCEEEEcCCccccccccc
Q psy7654 37 TVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDA--NGVL-VTCADGSQYSADKVLITVSLGVFKSDLI 113 (373)
Q Consensus 37 ~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~--~~v~-v~~~~G~~~~ad~VIvtiP~~~l~~~~i 113 (373)
..+++||++.|+++|++.+. ..|++|+++++|.+|.. ++ +++. |...+|+++.||+||+ .+..+..
T Consensus 370 ~~yp~GG~g~L~qaL~r~~~-----~~Gg~i~l~~~V~~I~~-~~~~g~v~gV~~~~Ge~i~A~~VVs--~~~~lp~--- 438 (650)
T 1vg0_A 370 FLFPLYGQGELPQCFCRMCA-----VFGGIYCLRHSVQCLVV-DKESRKCKAVIDQFGQRIISKHFII--EDSYLSE--- 438 (650)
T ss_dssp EEEETTCTTHHHHHHHHHHH-----HTTCEEESSCCEEEEEE-ETTTCCEEEEEETTSCEEECSEEEE--EGGGBCT---
T ss_pred eEEeCCchhHHHHHHHHHHH-----HcCCEEEeCCEeeEEEE-eCCCCeEEEEEeCCCCEEEcCEEEE--ChhhcCH---
Confidence 44679999999999998876 78999999999999988 44 5553 5567799999999998 2222221
Q ss_pred ccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCC
Q psy7654 114 TFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKW 146 (373)
Q Consensus 114 ~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~ 146 (373)
.+ .+++.++.+.++++.++++.
T Consensus 439 ----~~-------~~~~~~~~v~R~i~i~~~pi 460 (650)
T 1vg0_A 439 ----NT-------CSRVQYRQISRAVLITDGSV 460 (650)
T ss_dssp ----TT-------TTTCCCEEEEEEEEEESSCS
T ss_pred ----hH-------hccccccceEEEEEEecCCC
Confidence 11 12235678899999998874
No 35
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.26 E-value=0.00016 Score=72.07 Aligned_cols=61 Identities=11% Similarity=0.159 Sum_probs=52.1
Q ss_pred ecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecC--CCcE-EEEeCCCcEEEcCEEEEcCCcc
Q psy7654 39 WKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWED--ANGV-LVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 39 ~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~--~~~v-~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
+++||+++|+++|++.+. ++|++|++|++|++|.. . ++++ .|.+ +|+++.||+||+|+++.
T Consensus 236 ~p~gG~~~l~~al~~~~~-----~~G~~i~~~~~V~~i~~-~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 236 YPMYGLGELPQGFARLSA-----IYGGTYMLDTPIDEVLY-KKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp EETTCTTHHHHHHHHHHH-----HTTCEEECSCCCCEEEE-ETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred eeCCCHHHHHHHHHHHHH-----HcCCEEECCCEEEEEEE-ECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 468999999999999886 67899999999999998 5 5664 4666 57789999999999886
No 36
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.85 E-value=0.0012 Score=64.31 Aligned_cols=78 Identities=9% Similarity=0.015 Sum_probs=46.6
Q ss_pred hhcchhhhhhhh-ccCCcceeeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEc
Q psy7654 18 FETSAKRYNSFV-THEGCEDTVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSA 96 (373)
Q Consensus 18 ~~~S~~~~~~~~-~~~g~~~~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~a 96 (373)
.++|+..++.+. ..........++||+++|+++|++.+. .+|++|++|++|.+ .++++.+.+.+......
T Consensus 292 ~~~s~l~~l~~~~~~~~~~~~~~i~GG~~~l~~~l~~~l~--------~~i~l~~~V~~I~~-~~~gv~v~~~~~~~~~g 362 (376)
T 2e1m_A 292 LHLAFFHSFLGRSDIDPRATYWEIEGGSRMLPETLAKDLR--------DQIVMGQRMVRLEY-YDPGRDGHHGELTGPGG 362 (376)
T ss_dssp TTSBHHHHHHHCSCSCTTCCEEEETTCTTHHHHHHHHHGG--------GTEECSEEEEEEEE-CCCC-------------
T ss_pred chhhHHHHHHHhhhhccCCceEEECCcHHHHHHHHHHhcC--------CcEEecCeEEEEEE-CCCceEEEeCCCcCCCC
Confidence 467766666543 122222222358999999999999986 58999999999999 77777666544334456
Q ss_pred CEEEEcCC
Q psy7654 97 DKVLITVS 104 (373)
Q Consensus 97 d~VIvtiP 104 (373)
-+|++.+-
T Consensus 363 ~~~~~~~~ 370 (376)
T 2e1m_A 363 PAVAIQTV 370 (376)
T ss_dssp CCEEEEEE
T ss_pred CeeEEEec
Confidence 67776653
No 37
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=96.84 E-value=0.00053 Score=67.42 Aligned_cols=108 Identities=12% Similarity=0.058 Sum_probs=74.3
Q ss_pred hhhhhhhccCCchhhcchhhhhhhh---ccCC----cceeeecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEE
Q psy7654 5 GKAQNSLDASDSWFETSAKRYNSFV---THEG----CEDTVWKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKIN 77 (373)
Q Consensus 5 ~~~~~~~~~g~~~~~~S~~~~~~~~---~~~g----~~~~~~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~ 77 (373)
++-.+.-.+|.+.+++|+.++...- ..+. +....+++||+++|+++|+++. |++|++|++|+++
T Consensus 176 ~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~~l~e~l~~~~--------g~~V~l~~~v~~~- 246 (397)
T 3hdq_A 176 FRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGYTRMFQNMLSSP--------NIKVMLNTDYREI- 246 (397)
T ss_dssp THHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCHHHHHHHHTCST--------TEEEEESCCGGGT-
T ss_pred HHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCHHHHHHHHHhcc--------CCEEEECCeEEec-
Confidence 3444445668889999998765321 1110 1112246999999999997643 5899999999833
Q ss_pred ecCCCcEEEEeCCCcEEEcCEEEEcCCcccccccccccCCCCCHHHHHHHhcCCCcceeEEEEEcCCCCCC
Q psy7654 78 WEDANGVLVTCADGSQYSADKVLITVSLGVFKSDLITFVPPLPPQKKNIIESLFLGTVDKVFVRFPQKWWP 148 (373)
Q Consensus 78 ~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~l~~~~i~f~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~W~ 148 (373)
+.++.+|+||+|+|+..+-. . .+..+.|.++.-+.+.++.+.+.
T Consensus 247 -------------~~~~~~d~vI~T~P~d~~~~----~----------~~g~L~yrsl~~~~~~~~~~~~~ 290 (397)
T 3hdq_A 247 -------------ADFIPFQHMIYTGPVDAFFD----F----------CYGKLPYRSLEFRHETHDTEQLL 290 (397)
T ss_dssp -------------TTTSCEEEEEECSCHHHHTT----T----------TTCCCCEEEEEEEEEEESSSCSC
T ss_pred -------------cccccCCEEEEcCCHHHHHH----H----------hcCCCCCceEEEEEEEeccccCC
Confidence 23457899999999987633 1 24567888999999999876443
No 38
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=95.79 E-value=0.011 Score=57.92 Aligned_cols=59 Identities=19% Similarity=0.305 Sum_probs=51.3
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEcCC---ceEEEEecCCCcEE-EEeCCCcEEEcCEEEEcCCcccc
Q psy7654 44 YGNVLKLLLKQMPGQTPIDLGKKLLLNK---EVTKINWEDANGVL-VTCADGSQYSADKVLITVSLGVF 108 (373)
Q Consensus 44 ~~~L~~~L~~~l~~~~~~~~G~~I~ln~---~V~~I~~~~~~~v~-v~~~~G~~~~ad~VIvtiP~~~l 108 (373)
...++++|.+.+. ++|++|++++ +|++|.. ++++|. |.+.+|+++.||+||+|+-...-
T Consensus 160 ~~~~~~~L~~~a~-----~~Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 160 ARNALVAAAREAQ-----RMGVKFVTGTPQGRVVTLIF-ENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHHHHH-----HTTCEEEESTTTTCEEEEEE-ETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHH-----hcCCEEEeCCcCceEEEEEe-cCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 5688888888776 6789999999 9999998 677887 99999888999999999988753
No 39
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=95.78 E-value=0.0073 Score=57.43 Aligned_cols=56 Identities=18% Similarity=0.199 Sum_probs=49.1
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..++++|.+.+. ++|++|+++++|++|.. ++++|.|++.+| ++.||+||+|+-...
T Consensus 154 ~~~~~~l~~~a~-----~~Gv~i~~~~~V~~i~~-~~~~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 154 DALHQGYLRGIR-----RNQGQVLCNHEALEIRR-VDGAWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHH-----HTTCEEESSCCCCEEEE-ETTEEEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHH-----HCCCEEEcCCEEEEEEE-eCCeEEEEeCCC-EEEcCEEEECCChhH
Confidence 788888888776 67899999999999998 677899999888 899999999998864
No 40
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=95.46 E-value=0.017 Score=54.46 Aligned_cols=58 Identities=9% Similarity=0.079 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCc-EEEEeCCC--cEEEcCEEEEcCCccc
Q psy7654 44 YGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANG-VLVTCADG--SQYSADKVLITVSLGV 107 (373)
Q Consensus 44 ~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~-v~v~~~~G--~~~~ad~VIvtiP~~~ 107 (373)
...+.++|.+.+. +.|++|+++++|++|.. ++++ +.|.+.+| .++.||+||+|+-...
T Consensus 149 ~~~~~~~l~~~~~-----~~Gv~i~~~~~v~~i~~-~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAE-----SDGAQLVFHTPLIAGRV-RPEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHH-----HTTCEEECSCCEEEEEE-CTTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHH-----HCCCEEECCCEEEEEEE-cCCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 4678888888776 67899999999999998 5554 88888887 4789999999998864
No 41
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.35 E-value=0.018 Score=60.15 Aligned_cols=57 Identities=11% Similarity=0.180 Sum_probs=50.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..++++|.+.+. ++|++|+++++|++|.. ++++|.|.+.+|.++.||+||+|+-...
T Consensus 417 ~~l~~aL~~~a~-----~~Gv~i~~~t~V~~l~~-~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 417 AELTRNVLELAQ-----QQGLQIYYQYQLQNFSR-KDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEESCCEEEEEE-ETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHH-----hCCCEEEeCCeeeEEEE-eCCeEEEEECCCCEEECCEEEECCCcch
Confidence 788888888776 56899999999999999 7788999998888899999999998764
No 42
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.11 E-value=0.022 Score=59.66 Aligned_cols=57 Identities=9% Similarity=0.114 Sum_probs=49.2
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCc-EEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGS-QYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~-~~~ad~VIvtiP~~~ 107 (373)
..++++|.+.+. ++|++|+++++|++|.. ++++|.|.+.+|. ++.||+||+|+-...
T Consensus 412 ~~l~~aL~~~a~-----~~Gv~i~~~t~V~~l~~-~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 412 SDLTHALMMLAQ-----QNGMTCHYQHELQRLKR-IDSQWQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEESCCEEEEEE-CSSSEEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHH-----hCCCEEEeCCeEeEEEE-eCCeEEEEeCCCcEEEECCEEEECCCcch
Confidence 788888888776 56899999999999999 7778999998887 899999999998874
No 43
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=94.99 E-value=0.026 Score=55.48 Aligned_cols=62 Identities=18% Similarity=0.352 Sum_probs=52.7
Q ss_pred ecCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 39 WKKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 39 ~~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
++......+.+.|.+.+. +.|++|+++++|++|.. +++++.|.+.+| ++.||+||+|+-...
T Consensus 126 ~~~~~~~~l~~~L~~~l~-----~~Gv~i~~~~~V~~i~~-~~~~~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 126 FCDHSAKDIIRMLMAEMK-----EAGVQLRLETSIGEVER-TASGFRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp EESSCHHHHHHHHHHHHH-----HHTCEEECSCCEEEEEE-ETTEEEEEETTE-EEEESEEEECCCCSS
T ss_pred eeCCCHHHHHHHHHHHHH-----HCCCEEEECCEEEEEEE-eCCEEEEEECCc-EEEeeEEEECCCCcc
Confidence 345567789999988876 56799999999999998 777899999888 899999999988765
No 44
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=94.87 E-value=0.03 Score=53.08 Aligned_cols=56 Identities=30% Similarity=0.429 Sum_probs=47.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..+.++|.+.+. +.|++|+.+++|++|.. ++++|.|++.+| ++.||+||+|+....
T Consensus 149 ~~l~~~l~~~~~-----~~G~~i~~~~~V~~i~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 149 ELAIKTWIQLAK-----EAGCAQLFNCPVTAIRH-DDDGVTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHH-----HTTCEEECSCCEEEEEE-CSSSEEEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHH-----HCCCEEEcCCEEEEEEE-cCCEEEEEECCC-eEEcCEEEEcCCccH
Confidence 477888887765 56799999999999998 677788988887 599999999998865
No 45
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.77 E-value=0.038 Score=52.65 Aligned_cols=57 Identities=18% Similarity=0.113 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEE-EEeCCCcEEEcCEEEEcCCccc
Q psy7654 44 YGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVL-VTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 44 ~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~-v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
...+.++|.+.+. ++|++|+.+++|++|.. ++++|. |++.+| ++.||+||+|+-...
T Consensus 148 ~~~l~~~l~~~~~-----~~Gv~i~~~~~v~~i~~-~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 148 PFEATTAFAVKAK-----EYGAKLLEYTEVKGFLI-ENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHH-----HTTCEEECSCCEEEEEE-SSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHH-----HCCCEEECCceEEEEEE-ECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 3677888887775 56899999999999998 677887 888877 899999999998764
No 46
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=94.49 E-value=0.043 Score=54.15 Aligned_cols=59 Identities=25% Similarity=0.345 Sum_probs=49.4
Q ss_pred cHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCc-EEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 43 GYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANG-VLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 43 G~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~-v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
....+.+.|.+.+. +.|++|+++++|++|.. ++++ +.|.+.+|+++.||.||+|+-...
T Consensus 132 ~~~~l~~~L~~~~~-----~~GV~i~~~~~V~~i~~-~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 132 KAQSVVDALLTRLK-----DLGVKIRTNTPVETIEY-ENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp CHHHHHHHHHHHHH-----HTTCEEECSCCEEEEEE-ETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred CHHHHHHHHHHHHH-----HCCCEEEeCcEEEEEEe-cCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 46788899988876 56899999999999998 5666 778888887799999999987654
No 47
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=94.45 E-value=0.03 Score=53.36 Aligned_cols=56 Identities=18% Similarity=0.263 Sum_probs=47.9
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..+.+.|.+.+. +.|++|+++++|++|.. .+++|.|.+.+| ++.+|.||+|+....
T Consensus 164 ~~~~~~l~~~~~-----~~g~~i~~~~~v~~i~~-~~~~~~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 164 YFVCKAYVKAAK-----MLGAEIFEHTPVLHVER-DGEALFIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHH-----HTTCEEETTCCCCEEEC-SSSSEEEEETTE-EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHH-----HCCCEEEcCCcEEEEEE-ECCEEEEEcCCc-eEEcCEEEECCChhH
Confidence 678888888776 56799999999999998 677888888777 899999999998853
No 48
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=94.42 E-value=0.041 Score=52.44 Aligned_cols=56 Identities=21% Similarity=0.381 Sum_probs=47.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..+.++|.+.+. +.|++|+.+++|++|+. ++++|.|.+.+| ++.||.||+|+-...
T Consensus 150 ~~~~~~l~~~~~-----~~Gv~i~~~~~v~~i~~-~~~~~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAE-----ARGAKVLTHTRVEDFDI-SPDSVKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHH-----HTTCEEECSCCEEEEEE-CSSCEEEEETTE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHH-----HCCCEEEcCcEEEEEEe-cCCeEEEEeCCC-EEEeCEEEEecCccH
Confidence 678888888776 56899999999999998 677788888776 799999999998764
No 49
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=94.36 E-value=0.044 Score=52.65 Aligned_cols=55 Identities=31% Similarity=0.363 Sum_probs=45.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.++|.+.+. +.|++|+++++|++|.. ++++|.|.+.+| ++.||.||+|+-..
T Consensus 153 ~~~~~~l~~~a~-----~~Gv~i~~~~~V~~i~~-~~~~v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 153 RGTLAALFTLAQ-----AAGATLRAGETVTELVP-DADGVSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEESCCEEEEEE-ETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHH-----HcCCEEECCCEEEEEEE-cCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence 567778877665 56789999999999998 677888888776 79999999999765
No 50
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=94.30 E-value=0.067 Score=51.43 Aligned_cols=58 Identities=14% Similarity=0.227 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhCCCCCCCCC-CceEEcCCceEEEEecCCCcE--EEEeCCCcEEEcCEEEEcCCccc
Q psy7654 44 YGNVLKLLLKQMPGQTPIDL-GKKLLLNKEVTKINWEDANGV--LVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 44 ~~~L~~~L~~~l~~~~~~~~-G~~I~ln~~V~~I~~~~~~~v--~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
-..|.+.|.+.+. +. |++|+++++|++|.. ++++| .|++.+|+++++|.||.|.-...
T Consensus 106 r~~l~~~L~~~~~-----~~~gv~i~~~~~v~~i~~-~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 106 CESLRRLVLEKID-----GEATVEMLFETRIEAVQR-DERHAIDQVRLNDGRVLRPRVVVGADGIAS 166 (399)
T ss_dssp HHHHHHHHHHHHT-----TCTTEEEECSCCEEEEEE-CTTSCEEEEEETTSCEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhh-----hcCCcEEEcCCEEEEEEE-cCCceEEEEEECCCCEEECCEEEECCCCCh
Confidence 3577888888876 45 789999999999998 77788 89988888999999999998764
No 51
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=93.98 E-value=0.058 Score=45.76 Aligned_cols=54 Identities=15% Similarity=0.150 Sum_probs=44.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+++++ +|++|+. +++++.|++.+| ++.+|.||+|+-..
T Consensus 56 ~~~~~~l~~~~~-----~~gv~v~~~-~v~~i~~-~~~~~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 56 EELLRRLEAHAR-----RYGAEVRPG-VVKGVRD-MGGVFEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEEC-CCCEEEE-CSSSEEEECSSC-EEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHH-----HcCCEEEeC-EEEEEEE-cCCEEEEEECCC-EEEECEEEECCCCC
Confidence 567777777665 567899999 9999998 677788988888 89999999998764
No 52
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=93.93 E-value=0.075 Score=54.25 Aligned_cols=58 Identities=14% Similarity=0.310 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEcCCccc
Q psy7654 44 YGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV-LVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 44 ~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v-~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
...+.+.|.+.+. ++|++|+++++|++|.. .++++ .|++.+|+++.||.||+|+-...
T Consensus 219 ~~~l~~~L~~~l~-----~~Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 219 LVTMIEKMRATII-----ELGGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHH-----HTTCEEESSCCEEEEEE-SSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHH-----hcCCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 3678888888776 56899999999999998 66665 48888898999999999998765
No 53
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=93.65 E-value=0.11 Score=49.89 Aligned_cols=56 Identities=20% Similarity=0.276 Sum_probs=45.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+|+++++|++|+. +++++.|.+.+|+++.+|.||+|+...
T Consensus 187 ~~~~~~l~~~l~-----~~gv~i~~~~~v~~i~~-~~~~~~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 187 PAAAKAVQAGLE-----GLGVRFHLGPVLASLKK-AGEGLEAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp HHHHHHHHHHHH-----TTTCEEEESCCEEEEEE-ETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHH-----HcCCEEEeCCEEEEEEe-cCCEEEEEECCCCEEECCEEEECcCCC
Confidence 445666666665 56799999999999998 677788888888899999999998763
No 54
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=93.44 E-value=0.077 Score=51.73 Aligned_cols=58 Identities=16% Similarity=0.300 Sum_probs=47.8
Q ss_pred cHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecC----CCcEEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 43 GYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWED----ANGVLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 43 G~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~----~~~v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
....+.+.|.+.+. +.|++|+++++|++|.. + +++|.|.+.+| ++.||+||+|+-...
T Consensus 107 ~~~~l~~~L~~~~~-----~~Gv~i~~~~~v~~i~~-~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 107 GAEQIVEMLKSECD-----KYGAKILLRSEVSQVER-IQNDEKVRFVLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp CTHHHHHHHHHHHH-----HHTCEEECSCCEEEEEE-CCSCSSCCEEEEETTE-EEEESEEEECCCCSS
T ss_pred CHHHHHHHHHHHHH-----HCCCEEEeCCEEEEEEc-ccCcCCCeEEEEECCC-EEECCEEEECCCCcc
Confidence 56778888887775 56789999999999998 5 56788888777 899999999996554
No 55
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.13 E-value=0.13 Score=51.50 Aligned_cols=54 Identities=24% Similarity=0.375 Sum_probs=42.9
Q ss_pred HHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 47 VLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 47 L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
+.+.+.+.+. +.|.+|+++++|++|+. +++++.|.+.+|+++.+|.||+|+...
T Consensus 225 ~~~~l~~~l~-----~~GV~i~~~~~V~~i~~-~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 225 AALVLEESFA-----ERGVRLFKNARAASVTR-TGAGVLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHHHH-----HTTCEEETTCCEEEEEE-CSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHH-----HCCCEEEeCCEEEEEEE-eCCEEEEEECCCcEEEcCEEEECCCCC
Confidence 4444555554 56799999999999998 666788888888889999999998654
No 56
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=93.11 E-value=0.15 Score=49.41 Aligned_cols=56 Identities=21% Similarity=0.218 Sum_probs=43.9
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV-LVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v-~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|++|+++++|++|.. +++++ .|.+.+|+++.+|.||+++...
T Consensus 194 ~~~~~~l~~~l~-----~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 194 EALSEFYQAEHR-----AHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCCE
T ss_pred HHHHHHHHHHHH-----hCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 444555555554 56799999999999998 66665 6888899899999999998863
No 57
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=93.06 E-value=0.11 Score=51.60 Aligned_cols=55 Identities=20% Similarity=0.299 Sum_probs=44.1
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
.+.+.|.+.+. +.|.+|+++++|++|+. .++++.|.+.+|+++.+|.||+|+...
T Consensus 233 ~~~~~l~~~l~-----~~Gv~i~~~~~V~~i~~-~~~~v~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 233 DLRQLLNDAMV-----AKGISIIYEATVSQVQS-TENCYNVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHHHH-----HHTCEEESSCCEEEEEE-CSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHH-----HCCCEEEeCCEEEEEEe-eCCEEEEEECCCcEEEcCEEEEeeCCC
Confidence 34444555444 45789999999999998 777888999899899999999999863
No 58
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=93.03 E-value=0.17 Score=48.65 Aligned_cols=56 Identities=11% Similarity=0.157 Sum_probs=47.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGVF 108 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~l 108 (373)
..|.+.|.+.+.+ ++|+++++|++|+. ++++|.|++.+|+++++|.||.|.-....
T Consensus 128 ~~l~~~L~~~~~~-------~~i~~~~~v~~i~~-~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 128 NDLRAILLNSLEN-------DTVIWDRKLVMLEP-GKKKWTLTFENKPSETADLVILANGGMSK 183 (398)
T ss_dssp HHHHHHHHHTSCT-------TSEEESCCEEEEEE-CSSSEEEEETTSCCEEESEEEECSCTTCS
T ss_pred HHHHHHHHhhcCC-------CEEEECCEEEEEEE-CCCEEEEEECCCcEEecCEEEECCCcchh
Confidence 5677788887752 58999999999998 77889999999988999999999987643
No 59
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=93.01 E-value=0.14 Score=50.73 Aligned_cols=56 Identities=13% Similarity=0.201 Sum_probs=44.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+|+++++|++|+. .++++.|.+.+|+++.+|.||+|+...
T Consensus 202 ~~~~~~l~~~l~-----~~GV~i~~~~~v~~i~~-~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 202 KSLSQMLRHDLE-----KNDVVVHTGEKVVRLEG-ENGKVARVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp HHHHHHHHHHHH-----HTTCEEECSCCEEEEEE-SSSBEEEEEESSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHH-----hcCCEEEeCCEEEEEEc-cCCeEEEEEeCCCEEEcCEEEECCCCC
Confidence 445555555554 56799999999999998 677888888888899999999998863
No 60
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=92.71 E-value=0.19 Score=48.28 Aligned_cols=58 Identities=16% Similarity=0.173 Sum_probs=48.5
Q ss_pred cHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcccc
Q psy7654 43 GYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGVF 108 (373)
Q Consensus 43 G~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~l 108 (373)
+...|.+.|.+.+. |++|+++++|++|.. ++++|.|++.+|+++.+|.||.|.-....
T Consensus 97 ~~~~l~~~L~~~~~-------~~~i~~~~~v~~i~~-~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 97 SYDSIYGGLYELFG-------PERYHTSKCLVGLSQ-DSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp EHHHHHHHHHHHHC-------STTEETTCCEEEEEE-CSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred CHHHHHHHHHHhCC-------CcEEEcCCEEEEEEe-cCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 34678888877764 378999999999998 78889999999989999999999877643
No 61
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=92.65 E-value=0.21 Score=47.45 Aligned_cols=55 Identities=18% Similarity=0.250 Sum_probs=44.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..|-+.|.+.+. ..|+++++|++|+..++++|.|++++|+++++|.||-|=-...
T Consensus 112 ~~L~~~L~~~~~--------~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S 166 (412)
T 4hb9_A 112 TELKEILNKGLA--------NTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNS 166 (412)
T ss_dssp HHHHHHHHTTCT--------TTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTC
T ss_pred HHHHHHHHhhcc--------ceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCc
Confidence 356666777665 5799999999999845567999999999999999999877664
No 62
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=92.53 E-value=0.13 Score=49.20 Aligned_cols=56 Identities=21% Similarity=0.199 Sum_probs=45.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCc-EEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANG-VLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~-v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..+.+.|.+.+. +.|++|+.+++|++|.. ++++ +.|.+.+| ++.+|.||+|+-...
T Consensus 174 ~~~~~~l~~~~~-----~~g~~i~~~~~v~~i~~-~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 174 DHVAWAFARKAN-----EMGVDIIQNCEVTGFIK-DGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHH-----HTTCEEECSCCEEEEEE-SSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHH-----HCCCEEEcCCeEEEEEE-eCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 378888887776 56799999999999998 5555 56888777 799999999998753
No 63
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=92.46 E-value=0.18 Score=48.74 Aligned_cols=56 Identities=18% Similarity=0.252 Sum_probs=43.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV-LVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v-~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|++|+++++|++|.. +++++ .|.+.+|+++.+|.||+++...
T Consensus 184 ~~~~~~l~~~l~-----~~GV~i~~~~~v~~i~~-~~~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 184 PEISSYFHDRHS-----GAGIRMHYGVRATEIAA-EGDRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp HHHHHHHHHHHH-----HTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHH-----hCCcEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 445555555554 56799999999999998 55665 5888899999999999998763
No 64
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=92.39 E-value=0.19 Score=46.72 Aligned_cols=56 Identities=21% Similarity=0.393 Sum_probs=45.9
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.|.+.+. +.|.+++++++|++|.. .++.+.|.+.+|+++.+|+||+|+-..
T Consensus 65 ~~~~~~l~~~~~-----~~~~~~~~~~~v~~i~~-~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 65 KDLVKGLVEQVA-----PFNPVYSLGERAETLER-EGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHHHG-----GGCCEEEESCCEEEEEE-ETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHH-----HcCCEEEeCCEEEEEEE-CCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 567777776665 45678999999999998 566888988888889999999999874
No 65
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=92.33 E-value=0.22 Score=48.93 Aligned_cols=55 Identities=16% Similarity=0.267 Sum_probs=44.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+|+++++|++|+. .++++.|.+.+| ++.+|.||+|+...
T Consensus 189 ~~~~~~l~~~l~-----~~GV~i~~~~~v~~i~~-~~~~v~v~~~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 189 KEMVAEVQKSLE-----KQAVIFHFEETVLGIEE-TANGIVLETSEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp HHHHHHHHHHHH-----TTTEEEEETCCEEEEEE-CSSCEEEEESSC-EEEESEEEECSCCB
T ss_pred HHHHHHHHHHHH-----HcCCEEEeCCEEEEEEc-cCCeEEEEECCC-EEEeCEEEECcCCC
Confidence 455566666665 56899999999999997 677788888777 89999999998764
No 66
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=92.13 E-value=0.2 Score=48.19 Aligned_cols=55 Identities=25% Similarity=0.282 Sum_probs=46.9
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..|.+.|.+.+.+ ++|+++++|++|+. ++++|.|++.+|+++.+|.||.|.-...
T Consensus 127 ~~l~~~L~~~~~~-------~~i~~~~~v~~i~~-~~~~v~v~~~~g~~~~a~~vV~AdG~~S 181 (407)
T 3rp8_A 127 AELQREMLDYWGR-------DSVQFGKRVTRCEE-DADGVTVWFTDGSSASGDLLIAADGSHS 181 (407)
T ss_dssp HHHHHHHHHHHCG-------GGEEESCCEEEEEE-ETTEEEEEETTSCEEEESEEEECCCTTC
T ss_pred HHHHHHHHHhCCc-------CEEEECCEEEEEEe-cCCcEEEEEcCCCEEeeCEEEECCCcCh
Confidence 5677777777752 68999999999999 7889999999998999999999987764
No 67
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=92.05 E-value=0.24 Score=49.53 Aligned_cols=55 Identities=18% Similarity=0.323 Sum_probs=43.6
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
.+.+.+.+.+. +.|++|+++++|++|.. .++++.|.+.+|+++.+|.||+++...
T Consensus 227 ~~~~~~~~~l~-----~~GV~v~~~~~V~~i~~-~~~~~~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 227 YLSNWTMEKVR-----REGVKVMPNAIVQSVGV-SSGKLLIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHHHHHH-----TTTCEEECSCCEEEEEE-ETTEEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHH-----hcCCEEEeCCEEEEEEe-cCCeEEEEECCCCEEECCEEEECCCCC
Confidence 34444555554 56899999999999987 566778888889899999999998763
No 68
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=92.04 E-value=0.16 Score=49.94 Aligned_cols=56 Identities=23% Similarity=0.240 Sum_probs=44.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.|.+.+. +.|.+|+++++|++|+. +++++.+.+.+|+++.+|.||+|+...
T Consensus 208 ~~~~~~l~~~l~-----~~Gv~i~~~~~V~~i~~-~~~~v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 208 LEVSRAAERVFK-----KQGLTIRTGVRVTAVVP-EAKGARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp HHHHHHHHHHHH-----HHTCEEECSCCEEEEEE-ETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHH-----HCCCEEEECCEEEEEEE-eCCEEEEEECCCeEEEcCEEEECcCCC
Confidence 455555655554 45789999999999998 677788888788889999999998764
No 69
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=91.95 E-value=0.15 Score=47.42 Aligned_cols=56 Identities=16% Similarity=0.102 Sum_probs=44.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEE-EEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVL-VTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~-v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..+.+.|.+.+. ..|.+++++++|++|.. .+++|. |++.+| ++.+|+||+|+-...
T Consensus 76 ~~~~~~l~~~~~-----~~~~~~~~~~~v~~i~~-~~~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 76 AEVLAYLAQYEQ-----KYALPVLRPIRVQRVSH-FGERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHH-----HTTCCEECSCCEEEEEE-ETTEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHH-----HcCCEEEcCCEEEEEEE-CCCcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 455555554443 34578999999999999 788898 998888 899999999998643
No 70
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=91.76 E-value=0.28 Score=46.19 Aligned_cols=57 Identities=25% Similarity=0.311 Sum_probs=46.2
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCC-cEEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDAN-GVLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~-~v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..+.+.|.+.+. +.|.+++++++|++|.. .++ .+.|++.+|+++.+|+||+|+-...
T Consensus 74 ~~~~~~l~~~~~-----~~~~~~~~~~~v~~i~~-~~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 74 IDLVESLWAQAE-----RYNPDVVLNETVTKYTK-LDDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp HHHHHHHHHHHH-----TTCCEEECSCCEEEEEE-CTTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred HHHHHHHHHHHH-----HhCCEEEcCCEEEEEEE-CCCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 567777776665 45689999999999998 444 7889988888899999999998743
No 71
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=91.58 E-value=0.2 Score=48.69 Aligned_cols=54 Identities=24% Similarity=0.298 Sum_probs=41.9
Q ss_pred HHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 47 VLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 47 L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
+.+.+.+.+. +.|.+|+++++|++|.. ++....|.+.+|+++.+|.||+++...
T Consensus 187 ~~~~l~~~l~-----~~GV~i~~~~~v~~i~~-~~~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 187 IGAWLRGLLT-----ELGVQVELGTGVVGFSG-EGQLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHHH-----HHTCEEECSCCEEEEEC-SSSCCEEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHH-----HCCCEEEeCCEEEEEec-cCcEEEEEECCCCEEEcCEEEEeeCCe
Confidence 4444444444 45789999999999987 555457888899999999999999873
No 72
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=91.45 E-value=0.2 Score=50.44 Aligned_cols=55 Identities=25% Similarity=0.431 Sum_probs=42.6
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCc----EEEEeCCCc-EEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANG----VLVTCADGS-QYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~----v~v~~~~G~-~~~ad~VIvtiP~~ 106 (373)
.+.+.|.+.+. +.|.+|+++++|++|.. .+++ +.|++.+|+ ++.+|.||+|+...
T Consensus 256 ~~~~~l~~~l~-----~~GV~i~~~~~V~~i~~-~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 256 ETRAYVLDRMK-----EQGMEIISGSNVTRIEE-DANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp HHHHHHHHHHH-----HTTCEEESSCEEEEEEE-CTTSBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred HHHHHHHHHHH-----hCCcEEEECCEEEEEEE-cCCCceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 44555555554 56799999999999997 5554 778888887 79999999998753
No 73
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=91.16 E-value=0.31 Score=48.62 Aligned_cols=55 Identities=18% Similarity=0.228 Sum_probs=42.6
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCC-cEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDAN-GVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~-~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
.+.+.|.+.+. +.|.+|+++++|++|+. +++ .+.|.+.+|+++.+|.||+|+...
T Consensus 232 ~~~~~l~~~l~-----~~GV~i~~~~~v~~i~~-~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 232 ELRKQLTEQLR-----ANGINVRTHENPAKVTK-NADGTRHVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp HHHHHHHHHHH-----HTTEEEEETCCEEEEEE-CTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHH-----hCCCEEEeCCEEEEEEE-cCCCEEEEEECCCcEEEcCEEEEccCCC
Confidence 44555555554 56799999999999998 543 478888888889999999998653
No 74
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=90.95 E-value=0.35 Score=48.34 Aligned_cols=54 Identities=19% Similarity=0.343 Sum_probs=41.8
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCC-cEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDAN-GVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~-~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
.+.+.+.+.+. +.|.+|+++++|++|+. .++ .+.|++.+|+++.+|.||+++..
T Consensus 236 ~~~~~l~~~l~-----~~GV~i~~~~~v~~i~~-~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 236 TIREEVTKQLT-----ANGIEIMTNENPAKVSL-NTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp HHHHHHHHHHH-----HTTCEEEESCCEEEEEE-CTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHH-----hCCCEEEeCCEEEEEEE-cCCceEEEEECCCcEEEcCEEEECCCC
Confidence 34445555554 56799999999999998 543 47888888888999999999864
No 75
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=90.80 E-value=0.39 Score=44.21 Aligned_cols=56 Identities=18% Similarity=0.271 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCC-cEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 44 YGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDAN-GVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 44 ~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~-~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
...+.+.+.+.+. +.|.+++++++|++|.. .++ .|.|.+.+|+ +.+|+||+|+-..
T Consensus 66 ~~~~~~~~~~~~~-----~~~~~~~~~~~v~~i~~-~~~~~~~v~~~~g~-~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 66 AQELINNLKEQMA-----KFDQTICLEQAVESVEK-QADGVFKLVTNEET-HYSKTVIITAGNG 122 (332)
T ss_dssp HHHHHHHHHHHHT-----TSCCEEECSCCEEEEEE-CTTSCEEEEESSEE-EEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHH-----HhCCcEEccCEEEEEEE-CCCCcEEEEECCCE-EEeCEEEECCCCC
Confidence 3667777777776 55789999999999998 554 7899998884 9999999999874
No 76
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=90.73 E-value=0.34 Score=47.89 Aligned_cols=54 Identities=24% Similarity=0.273 Sum_probs=42.6
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCc-EEEcCEEEEcCCc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGS-QYSADKVLITVSL 105 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~-~~~ad~VIvtiP~ 105 (373)
.+.+.+.+.+. +.|.+|+++++|++|+. .++++.|++.+|+ ++.+|.||+|+..
T Consensus 208 ~~~~~l~~~l~-----~~gv~i~~~~~v~~i~~-~~~~~~v~~~~G~~~i~~D~vv~a~G~ 262 (463)
T 2r9z_A 208 LLSATLAENMH-----AQGIETHLEFAVAALER-DAQGTTLVAQDGTRLEGFDSVIWAVGR 262 (463)
T ss_dssp HHHHHHHHHHH-----HTTCEEESSCCEEEEEE-ETTEEEEEETTCCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHH-----HCCCEEEeCCEEEEEEE-eCCeEEEEEeCCcEEEEcCEEEECCCC
Confidence 34445555554 45789999999999998 5666888888898 8999999999865
No 77
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=90.68 E-value=0.26 Score=52.61 Aligned_cols=56 Identities=27% Similarity=0.249 Sum_probs=47.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV-LVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v-~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..+.++|++.+. ++|++|+.+++|++|.. +++++ .|.+.+| ++.||+||+|+-...
T Consensus 151 ~~l~~~L~~~a~-----~~Gv~i~~~t~V~~i~~-~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 151 ARAVQLLIKRTE-----SAGVTYRGSTTVTGIEQ-SGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHH-----HTTCEEECSCCEEEEEE-ETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHH-----HcCCEEECCceEEEEEE-eCCEEEEEEECCc-EEECCEEEECCccch
Confidence 478888888776 66899999999999998 66665 5778777 899999999998864
No 78
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=90.33 E-value=0.34 Score=47.65 Aligned_cols=54 Identities=15% Similarity=0.198 Sum_probs=42.0
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCC-cEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDAN-GVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~-~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
.+.+.|.+.+. +.|.+|+++++|++|+. .++ .+.|++.+|+++.+|.||+|+..
T Consensus 209 ~~~~~l~~~l~-----~~Gv~i~~~~~v~~i~~-~~~~~~~v~~~~g~~i~~D~vv~a~G~ 263 (450)
T 1ges_A 209 MISETLVEVMN-----AEGPQLHTNAIPKAVVK-NTDGSLTLELEDGRSETVDCLIWAIGR 263 (450)
T ss_dssp HHHHHHHHHHH-----HHSCEEECSCCEEEEEE-CTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred HHHHHHHHHHH-----HCCCEEEeCCEEEEEEE-eCCcEEEEEECCCcEEEcCEEEECCCC
Confidence 34455555554 45789999999999998 544 47888888888999999999865
No 79
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=90.12 E-value=0.31 Score=48.82 Aligned_cols=57 Identities=14% Similarity=0.074 Sum_probs=44.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCc---EEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGS---QYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~---~~~ad~VIvtiP~~~ 107 (373)
..|.+.|.+.+. ++|++|+++++|++|+. ++++|.|++.++. ++++|.||.|--...
T Consensus 107 ~~l~~~L~~~~~-----~~gv~v~~~~~v~~i~~-~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 107 STTESVLEEWAL-----GRGAELLRGHTVRALTD-EGDHVVVEVEGPDGPRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEESCEEEEEEE-CSSCEEEEEECSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHH-----hCCCEEEcCCEEEEEEE-eCCEEEEEEEcCCCcEEEEeCEEEEccCccc
Confidence 445555555554 44689999999999998 7788888877764 789999999987764
No 80
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=90.07 E-value=0.24 Score=48.34 Aligned_cols=58 Identities=10% Similarity=0.273 Sum_probs=45.7
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEec--------------CCCcE-EEEeCCCcEE--EcCEEEEcCCcc
Q psy7654 44 YGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWE--------------DANGV-LVTCADGSQY--SADKVLITVSLG 106 (373)
Q Consensus 44 ~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~--------------~~~~v-~v~~~~G~~~--~ad~VIvtiP~~ 106 (373)
...+.++|.+.+. +.|++|+.+++|++|... .++++ .|.+.+| ++ .||.||+|+-..
T Consensus 180 ~~~l~~~L~~~~~-----~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 180 AEKVVDYYYRRAS-----GAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp HHHHHHHHHHHHH-----HTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHH-----hCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC
Confidence 3578888888776 568999999999999871 23444 6778777 68 999999999876
Q ss_pred c
Q psy7654 107 V 107 (373)
Q Consensus 107 ~ 107 (373)
.
T Consensus 254 s 254 (448)
T 3axb_A 254 S 254 (448)
T ss_dssp H
T ss_pred H
Confidence 4
No 81
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=90.07 E-value=0.34 Score=45.51 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=36.1
Q ss_pred CCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 63 LGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
.|.+|+++++|++|.. .++++.|.+.+| ++.+|+||+|+-..
T Consensus 101 ~gv~i~~~~~v~~i~~-~~~~~~v~~~~g-~~~~d~vVlAtG~~ 142 (369)
T 3d1c_A 101 YELNIFENTVVTNISA-DDAYYTIATTTE-TYHADYIFVATGDY 142 (369)
T ss_dssp TTCEEECSCCEEEEEE-CSSSEEEEESSC-CEEEEEEEECCCST
T ss_pred cCCeEEeCCEEEEEEE-CCCeEEEEeCCC-EEEeCEEEECCCCC
Confidence 4579999999999998 667888988777 68999999998874
No 82
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=90.05 E-value=0.12 Score=50.03 Aligned_cols=56 Identities=20% Similarity=0.250 Sum_probs=41.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceE---------EEEecCCCcEEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVT---------KINWEDANGVLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~---------~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..+.++|.+.+. +.|++|+.+++|+ +|.. ++++|.|.+.+| ++.||.||+|.-...
T Consensus 172 ~~l~~~L~~~~~-----~~Gv~i~~~~~v~~~~g~~~~~~i~~-~~~~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 172 GSLALLAAQQAI-----GQGAGLLLNTRAELVPGGVRLHRLTV-TNTHQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHH-----TTTCEEECSCEEEEETTEEEEECBCC--------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHH-----HCCCEEEcCCEEEeccccccccceEe-eCCeEEEEECCc-EEECCEEEECCCccH
Confidence 568888888776 5689999999999 8987 667787777776 899999999998764
No 83
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=89.95 E-value=0.4 Score=47.27 Aligned_cols=55 Identities=22% Similarity=0.346 Sum_probs=42.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCc-EEEE-eCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANG-VLVT-CADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~-v~v~-~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+|+++++|++|+. ++++ +.|. +.+|+ +.+|.||+|+...
T Consensus 211 ~~~~~~l~~~l~-----~~Gv~i~~~~~v~~i~~-~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 211 QDMRRGLHAAME-----EKGIRILCEDIIQSVSA-DADGRRVATTMKHGE-IVADQVMLALGRM 267 (463)
T ss_dssp HHHHHHHHHHHH-----HTTCEEECSCCEEEEEE-CTTSCEEEEESSSCE-EEESEEEECSCEE
T ss_pred HHHHHHHHHHHH-----HCCCEEECCCEEEEEEE-cCCCEEEEEEcCCCe-EEeCEEEEeeCcc
Confidence 344555555554 56799999999999998 5444 6788 88886 9999999998763
No 84
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=89.83 E-value=0.27 Score=48.15 Aligned_cols=57 Identities=19% Similarity=0.047 Sum_probs=41.9
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCC---Cc---EEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCAD---GS---QYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~---G~---~~~ad~VIvtiP~~~ 107 (373)
..+.+.|.+.+. ..+..|+++++|++|+. .+++|.|++.+ |+ ++.+|+||+|+-...
T Consensus 115 ~~l~~~l~~~~~-----~~~~~i~~~t~V~~v~~-~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 115 HTIQEYQRIYAQ-----PLLPFIKLATDVLDIEK-KDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp HHHHHHHHHHHG-----GGGGGEECSEEEEEEEE-ETTEEEEEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHH-----HhhCeEEeCCEEEEEEe-CCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 445555544433 23467999999999998 67778887755 66 789999999998743
No 85
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=89.82 E-value=0.44 Score=42.26 Aligned_cols=55 Identities=18% Similarity=0.141 Sum_probs=41.7
Q ss_pred HHHHHHHHhCCCCCCCCC-CceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEcCCccc
Q psy7654 46 NVLKLLLKQMPGQTPIDL-GKKLLLNKEVTKINWEDANGV-LVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~-G~~I~ln~~V~~I~~~~~~~v-~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
.+.+.|.+.+. ++ |.+++ +++|++|.. +++++ .|.+.+|+++.+|.||+|+-...
T Consensus 69 ~~~~~l~~~~~-----~~~gv~i~-~~~v~~i~~-~~~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 69 AFHARAKYLLE-----GLRPLHLF-QATATGLLL-EGNRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHH-----TCTTEEEE-ECCEEEEEE-ETTEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHH-----cCCCcEEE-EeEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 55566666665 33 67888 679999998 56664 57788888899999999988743
No 86
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=89.65 E-value=0.32 Score=48.76 Aligned_cols=57 Identities=18% Similarity=0.070 Sum_probs=44.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCc---EEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGS---QYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~---~~~ad~VIvtiP~~~ 107 (373)
..|.+.|.+.+. ++|++|+++++|++|+. ++++|.|++.++. ++++|.||.|--...
T Consensus 106 ~~l~~~L~~~~~-----~~gv~v~~~~~v~~i~~-~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 106 SVTETHLEQWAT-----GLGADIRRGHEVLSLTD-DGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEETCEEEEEEE-ETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred HHHHHHHHHHHH-----HCCCEEECCcEEEEEEE-cCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 345555555554 44689999999999998 7788888877664 789999999987764
No 87
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.48 E-value=0.56 Score=46.81 Aligned_cols=56 Identities=18% Similarity=0.230 Sum_probs=42.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCC-CcEEEEeCCCcE-EEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDA-NGVLVTCADGSQ-YSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~-~~v~v~~~~G~~-~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+|+++++|++|+. .+ +.+.|.+.+|++ +.+|.||+|+...
T Consensus 217 ~~~~~~l~~~l~-----~~gv~i~~~~~v~~i~~-~~~~~~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 217 ESVINVLENDMK-----KNNINIVTFADVVEIKK-VSDKNLSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp HHHHHHHHHHHH-----HTTCEEECSCCEEEEEE-SSTTCEEEEETTSCEEEEESEEEECCCBC
T ss_pred hhhHHHHHHHHH-----hCCCEEEECCEEEEEEE-cCCceEEEEECCCcEEEECCEEEECCCCC
Confidence 344555555554 56799999999999997 44 347888888877 9999999998753
No 88
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=89.45 E-value=0.41 Score=47.43 Aligned_cols=54 Identities=11% Similarity=0.159 Sum_probs=40.8
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCc--EEEEeCCC-cEEEcCEEEEcCCc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANG--VLVTCADG-SQYSADKVLITVSL 105 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~--v~v~~~~G-~~~~ad~VIvtiP~ 105 (373)
.+.+.+.+.+. +.|.+|+++++|++|+. .+++ +.|.+.+| +++.+|.||+|+..
T Consensus 227 ~~~~~l~~~l~-----~~Gv~i~~~~~v~~i~~-~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 227 CIQNTITDHYV-----KEGINVHKLSKIVKVEK-NVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HHHHHHHHHHH-----HHTCEEECSCCEEEEEE-CC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHH-----hCCeEEEeCCEEEEEEE-cCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 34444555444 45789999999999997 5444 77888888 78999999999875
No 89
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=89.44 E-value=0.5 Score=43.14 Aligned_cols=55 Identities=20% Similarity=0.374 Sum_probs=43.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.++++ ++|++|.. .++.+.|.+.+|.++.+|+||+|+-..
T Consensus 70 ~~~~~~~~~~~~-----~~~v~~~~-~~v~~i~~-~~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 70 SDMIKVFNKHIE-----KYEVPVLL-DIVEKIEN-RGDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHH-----TTTCCEEE-SCEEEEEE-C--CEEEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHH-----HcCCEEEE-EEEEEEEe-cCCEEEEEECCCCEEEcCEEEECcCCC
Confidence 567777766665 45688999 99999998 778899999888899999999998765
No 90
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=89.27 E-value=0.39 Score=45.81 Aligned_cols=59 Identities=14% Similarity=0.124 Sum_probs=44.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEe-CCCc--EEEcCEEEEcCCcccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTC-ADGS--QYSADKVLITVSLGVF 108 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~-~~G~--~~~ad~VIvtiP~~~l 108 (373)
..+.+.|.+.+. +.|++|+++++|++|...+++++.|+. .+|+ ++.+|.||.|.-....
T Consensus 103 ~~l~~~L~~~~~-----~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 103 TEVTRDLMEARE-----ACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp HHHHHHHHHHHH-----HTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCS
T ss_pred HHHHHHHHHHHH-----hcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcH
Confidence 456666766654 346899999999999973245677776 6776 6899999999887643
No 91
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=89.18 E-value=0.47 Score=48.19 Aligned_cols=56 Identities=20% Similarity=0.149 Sum_probs=43.2
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCC-CcE---EEEeCCCc--EEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDA-NGV---LVTCADGS--QYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~-~~v---~v~~~~G~--~~~ad~VIvtiP~~ 106 (373)
..+.+.|.+.+. ++|++|+++++|++|.. ++ ++| .+...+|+ ++.+|.||+|+-..
T Consensus 255 ~~l~~~L~~~~~-----~~gv~i~~~~~v~~l~~-~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 255 AHVVQVLYDNAV-----KRNIDLRMNTRGIEVLK-DDKGTVKGILVKGMYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp HHHHHHHHHHHH-----HTTCEEESSEEEEEEEE-CTTSCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHH-----hcCCEEEeCCEeeEeEE-cCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCc
Confidence 678888888776 56899999999999998 55 553 34443665 68999999998764
No 92
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=89.05 E-value=0.37 Score=48.29 Aligned_cols=61 Identities=20% Similarity=0.249 Sum_probs=43.6
Q ss_pred CcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEE-EEeC-CCc--EEEcC-EEEEcCCccc
Q psy7654 42 GGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVL-VTCA-DGS--QYSAD-KVLITVSLGV 107 (373)
Q Consensus 42 gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~-v~~~-~G~--~~~ad-~VIvtiP~~~ 107 (373)
+|...|++.|.+.+. ++|++|+++++|++|..+.+++|. |... +|+ ++.|| .||+|+--..
T Consensus 199 ~g~~~l~~~L~~~~~-----~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 199 GGGYMLMKPLVETAE-----KLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp CTTHHHHHHHHHHHH-----HTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred CCHHHHHHHHHHHHH-----HcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 444588888888776 568999999999999983245542 4332 332 57896 9999887653
No 93
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=88.97 E-value=0.55 Score=46.00 Aligned_cols=55 Identities=18% Similarity=0.326 Sum_probs=41.6
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEE-EEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVL-VTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~-v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+|+++++|++|+. .++++. +.+ +|+++.+|.||+|+...
T Consensus 191 ~~~~~~l~~~l~-----~~Gv~i~~~~~v~~i~~-~~~~v~~v~~-~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 191 KEFTDILAKDYE-----AHGVNLVLGSKVAAFEE-VDDEIITKTL-DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEESSCEEEEEE-ETTEEEEEET-TSCEEEESEEEECCCEE
T ss_pred hhHHHHHHHHHH-----HCCCEEEcCCeeEEEEc-CCCeEEEEEe-CCCEEECCEEEECcCCC
Confidence 445555555554 56799999999999987 566665 444 77889999999999764
No 94
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=88.96 E-value=0.61 Score=42.66 Aligned_cols=57 Identities=9% Similarity=0.114 Sum_probs=44.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecC--CCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWED--ANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~--~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+++++++|++|.... ++.+.|++.+|+++.+|+||+|+-..
T Consensus 56 ~~~~~~~~~~~~-----~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 56 QKLAGALKVHVD-----EYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHHHHHH-----TSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHH-----HcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 456666666554 4568999999999998621 23688888888889999999999764
No 95
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=88.94 E-value=0.27 Score=46.65 Aligned_cols=57 Identities=11% Similarity=0.045 Sum_probs=43.2
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEE-EEe---CCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVL-VTC---ADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~-v~~---~~G~~~~ad~VIvtiP~~~ 107 (373)
..+.+.|.+.+. +.|++|+++++|++|.. +++++. |++ .++.++.||.||.|.-...
T Consensus 102 ~~l~~~L~~~~~-----~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 102 DKFDKHLAALAA-----KAGADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHH-----HHTCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHH-----hCCCEEEECCEEEEEEE-eCCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 456666666654 45789999999999998 677765 665 3456789999999987664
No 96
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=88.68 E-value=0.37 Score=46.31 Aligned_cols=57 Identities=19% Similarity=0.232 Sum_probs=43.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCc--EEEEeCCCc--EEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANG--VLVTCADGS--QYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~--v~v~~~~G~--~~~ad~VIvtiP~~~ 107 (373)
..+.+.|.+.+. +.|++|+++++|++|.. .+++ +.|.+.+|+ ++.||.||.|.-...
T Consensus 106 ~~~~~~L~~~a~-----~~gv~i~~~~~v~~i~~-~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 106 GNFDKTLADEAA-----RQGVDVEYEVGVTDIKF-FGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHH-----HHTCEEECSEEEEEEEE-ETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHH-----hCCCEEEcCCEEEEEEE-eCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 456666666554 45789999999999998 6665 456667887 689999999987653
No 97
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=88.55 E-value=0.42 Score=48.56 Aligned_cols=58 Identities=19% Similarity=0.160 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCC-CcE---EEEeCCCc--EEEcCEEEEcCCccc
Q psy7654 44 YGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDA-NGV---LVTCADGS--QYSADKVLITVSLGV 107 (373)
Q Consensus 44 ~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~-~~v---~v~~~~G~--~~~ad~VIvtiP~~~ 107 (373)
-..|.+.|.+.+. ++|++|+++++|++|.. ++ ++| .+...+|+ ++.+|.||+|+-...
T Consensus 249 ~~~l~~~L~~~~~-----~~gv~i~~~~~v~~l~~-~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 249 GPEIIDTLRKAAK-----EQGIDTRLNSRVVKLVV-NDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHH-----HTTCCEECSEEEEEEEE-CTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHH-----hcCCEEEeCCEEEEEEE-CCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 4668888887776 56799999999999998 55 654 34444675 578999999987654
No 98
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=88.40 E-value=0.69 Score=42.29 Aligned_cols=54 Identities=17% Similarity=0.257 Sum_probs=43.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
..+.+.|.+.+. +.|.++++ ++|++|.. .++++.|.+.+|+++.+|+||+|+-.
T Consensus 59 ~~~~~~l~~~~~-----~~~v~~~~-~~v~~i~~-~~~~~~v~~~~g~~~~~~~vv~AtG~ 112 (311)
T 2q0l_A 59 LDFMQPWQEQCF-----RFGLKHEM-TAVQRVSK-KDSHFVILAEDGKTFEAKSVIIATGG 112 (311)
T ss_dssp HHHHHHHHHHHH-----TTSCEEEC-SCEEEEEE-ETTEEEEEETTSCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHH-----HcCCEEEE-EEEEEEEE-cCCEEEEEEcCCCEEECCEEEECCCC
Confidence 556666666554 45688988 79999998 67778888888888999999999985
No 99
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=88.25 E-value=0.57 Score=46.13 Aligned_cols=54 Identities=15% Similarity=0.251 Sum_probs=38.9
Q ss_pred HHHHHHHhC-CCCCCCCCCceEEcCCceEEEEecCCCcEEEEeC--CC--cEEEcCEEEEcCCcc
Q psy7654 47 VLKLLLKQM-PGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCA--DG--SQYSADKVLITVSLG 106 (373)
Q Consensus 47 L~~~L~~~l-~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~--~G--~~~~ad~VIvtiP~~ 106 (373)
+.+.+.+.+ . +.|.+|+++++|++|+. +++++.|.+. +| +++.+|.||+|+...
T Consensus 217 ~~~~l~~~l~~-----~~gv~i~~~~~v~~i~~-~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 217 VTNALVGALAK-----NEKMKFMTSTKVVGGTN-NGDSVSLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp HHHHHHHHHHH-----HTCCEEECSCEEEEEEE-CSSSEEEEEECC---EEEEEESEEEECSCEE
T ss_pred HHHHHHHHHhh-----cCCcEEEeCCEEEEEEE-cCCeEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 444444444 4 45789999999999998 6666766654 56 578999999998763
No 100
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=88.20 E-value=0.34 Score=48.68 Aligned_cols=57 Identities=14% Similarity=0.113 Sum_probs=44.9
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCC----cEEEEeCCC---cEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDAN----GVLVTCADG---SQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~----~v~v~~~~G---~~~~ad~VIvtiP~~~ 107 (373)
..|.+.|.+.+. ++|++|+++++|++|+. +++ +|.+++.++ .++.||.||.|.-...
T Consensus 120 ~~l~~~L~~~a~-----~~gv~i~~~~~v~~i~~-~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 120 DKLEPILLAQAR-----KHGGAIRFGTRLLSFRQ-HDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHH-----HTTCEEESSCEEEEEEE-ECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHH-----hCCCEEEeCCEEEEEEE-CCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 456666666665 45789999999999998 676 888877665 6789999999988764
No 101
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=88.02 E-value=0.6 Score=46.06 Aligned_cols=56 Identities=27% Similarity=0.290 Sum_probs=41.5
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCC---cEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADG---SQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G---~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+|+++++|++|+. +++++.|...++ +++.+|.||+++...
T Consensus 221 ~~~~~~l~~~l~-----~~Gv~v~~~~~v~~i~~-~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 221 EQVAKEAQKILT-----KQGLKILLGARVTGTEV-KNKQVTVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHHHHHH-----HTTEEEEETCEEEEEEE-CSSCEEEEEESSSEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHH-----hCCCEEEECCEEEEEEE-cCCEEEEEEEeCCCcEEEECCEEEEeeCCc
Confidence 344455555554 45789999999999998 677777766543 578999999999764
No 102
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=88.00 E-value=0.61 Score=47.49 Aligned_cols=57 Identities=28% Similarity=0.233 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCC-CcE---EEEeCCCc--EEEcCEEEEcCCcc
Q psy7654 44 YGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDA-NGV---LVTCADGS--QYSADKVLITVSLG 106 (373)
Q Consensus 44 ~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~-~~v---~v~~~~G~--~~~ad~VIvtiP~~ 106 (373)
-..+.+.|.+.+. ++|++|+++++|++|.. ++ ++| .+...+|+ ++.+|.||+|+-..
T Consensus 254 g~~l~~~L~~~~~-----~~gv~i~~~t~v~~l~~-~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~ 316 (572)
T 1d4d_A 254 GAHVAQVLWDNAV-----KRGTDIRLNSRVVRILE-DASGKVTGVLVKGEYTGYYVIKADAVVIAAGGF 316 (572)
T ss_dssp HHHHHHHHHHHHH-----HTTCEEESSEEEEEEEE-C--CCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHH-----HcCCeEEecCEEEEEEE-CCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCC
Confidence 4578888888776 56899999999999987 55 543 34444664 57899999998754
No 103
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=87.99 E-value=0.76 Score=45.70 Aligned_cols=56 Identities=16% Similarity=0.185 Sum_probs=43.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCc--EEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANG--VLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~--v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..+.+.|.+.+. +.|++++.+ +|++|.. ++++ +.|++.+|+++.+|.||.|.-...
T Consensus 173 ~~l~~~L~~~a~-----~~gv~~~~~-~v~~i~~-~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 173 DEVARYLSEYAI-----ARGVRHVVD-DVQHVGQ-DERGWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEEC-CEEEEEE-CTTSCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHH-----HCCCEEEEC-eEeEEEE-cCCCCEEEEEECCCCEEEcCEEEECCCcch
Confidence 456666666654 457899999 9999998 5444 678888888899999999998864
No 104
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=87.93 E-value=0.5 Score=47.90 Aligned_cols=40 Identities=28% Similarity=0.223 Sum_probs=35.2
Q ss_pred eEEcCCceEEEEecCCC--cEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 66 KLLLNKEVTKINWEDAN--GVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 66 ~I~ln~~V~~I~~~~~~--~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
.|+++++|++|+. +++ +|.|++.+|+++.+|+||+|+-..
T Consensus 105 ~i~~~~~V~~i~~-~~~~~~~~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 105 HFKFGTEVTSALY-LDDENLWEVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp GEEESCCEEEEEE-ETTTTEEEEEETTSCEEEEEEEEECCCSC
T ss_pred eeEeccEEEEEEE-eCCCCEEEEEEcCCCEEEeCEEEECCccc
Confidence 7999999999998 444 789999999889999999999863
No 105
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=87.90 E-value=0.52 Score=47.04 Aligned_cols=58 Identities=12% Similarity=0.105 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEe---CCCc--EEEcCEEEEcCCccc
Q psy7654 44 YGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTC---ADGS--QYSADKVLITVSLGV 107 (373)
Q Consensus 44 ~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~---~~G~--~~~ad~VIvtiP~~~ 107 (373)
-..+..+|++.+. +.|++|+.+++|++|.. +++.+.|.+ .+|+ ++.||.||+|+-+..
T Consensus 148 ~~~l~~~l~~~a~-----~~Gv~i~~~~~V~~l~~-~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVV-----RKGGEVLTRTRATSARR-ENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHH-----HTTCEEECSEEEEEEEE-ETTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHH-----HcCCEEEcCcEEEEEEE-eCCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 4678888887775 56899999999999998 566566666 3565 689999999998874
No 106
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=87.87 E-value=0.92 Score=41.55 Aligned_cols=56 Identities=16% Similarity=0.229 Sum_probs=39.5
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE-EEEeCC----C--cEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV-LVTCAD----G--SQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v-~v~~~~----G--~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+|+++++|++|.. +++++ .|...+ | .++.+|.||++++..
T Consensus 184 ~~~~~~l~~~l~-----~~gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 184 KILIKRLMDKVE-----NGNIILHTNRTLEEVTG-DQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHHH-----TSSEEEECSCEEEEEEE-CSSSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHHHhcc-----cCCeEEEcCceeEEEEc-CCCceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 345556666554 56799999999999998 55453 243322 4 578999999998864
No 107
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=87.80 E-value=0.65 Score=46.93 Aligned_cols=56 Identities=23% Similarity=0.266 Sum_probs=43.6
Q ss_pred HHHHHHHHHhCCCCCCCCC-CceEEcCCceEEEEecCCCc--EEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDL-GKKLLLNKEVTKINWEDANG--VLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~-G~~I~ln~~V~~I~~~~~~~--v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..+.+.|.+.+. +. |++|+++ +|++|.. ++++ +.|.+.+|+++.+|.||.|.-...
T Consensus 194 ~~l~~~L~~~~~-----~~~Gv~i~~~-~V~~i~~-~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 194 HLVADFLRRFAT-----EKLGVRHVED-RVEHVQR-DANGNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHH-----HHSCCEEEEC-CEEEEEE-CTTSCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHH-----hcCCcEEEEC-eEeEEEE-cCCCCEEEEEECCCCEEECCEEEECCCCch
Confidence 456666766664 45 7899999 9999998 5444 578888888899999999998764
No 108
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=87.72 E-value=0.65 Score=44.14 Aligned_cols=54 Identities=20% Similarity=0.267 Sum_probs=42.2
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..|.+.|.+.+. +.|++|+++++|++|.. + + .|++.+|+++.+|.||.|.-...
T Consensus 107 ~~l~~~L~~~~~-----~~gv~i~~~~~v~~i~~-~--~-~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 107 SHLHDALVNRAR-----ALGVDISVNSEAVAADP-V--G-RLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp HHHHHHHHHHHH-----HTTCEEESSCCEEEEET-T--T-EEEETTSCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHH-----hcCCEEEeCCEEEEEEe-C--C-EEEECCCCEEEcCEEEECCCccH
Confidence 556666666654 34689999999999986 3 3 67778888899999999988764
No 109
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=87.65 E-value=0.86 Score=45.95 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=35.7
Q ss_pred ceEEcCCceEEEEecCC-CcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 65 KKLLLNKEVTKINWEDA-NGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 65 ~~I~ln~~V~~I~~~~~-~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
.+|+++++|++++...+ +.|.|++.+|++++||+||+|+-..
T Consensus 111 ~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 111 SGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp GGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSC
T ss_pred ceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCC
Confidence 57999999999998332 4689999899899999999999864
No 110
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=87.65 E-value=0.58 Score=46.14 Aligned_cols=54 Identities=20% Similarity=0.299 Sum_probs=40.7
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeC-C--Cc--EEEcCEEEEcCCc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCA-D--GS--QYSADKVLITVSL 105 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~-~--G~--~~~ad~VIvtiP~ 105 (373)
.+.+.+.+.+. +.|.+|+++++|++|+. .++++.|+.. + |+ ++.+|.||+|+..
T Consensus 211 ~~~~~l~~~l~-----~~gV~i~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~ 269 (464)
T 2eq6_A 211 ETAALLRRALE-----KEGIRVRTKTKAVGYEK-KKDGLHVRLEPAEGGEGEEVVVDKVLVAVGR 269 (464)
T ss_dssp HHHHHHHHHHH-----HTTCEEECSEEEEEEEE-ETTEEEEEEEETTCCSCEEEEESEEEECSCE
T ss_pred HHHHHHHHHHH-----hcCCEEEcCCEEEEEEE-eCCEEEEEEeecCCCceeEEEcCEEEECCCc
Confidence 44445555554 45789999999999998 6667777665 5 76 7899999999865
No 111
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=87.48 E-value=0.48 Score=45.40 Aligned_cols=59 Identities=8% Similarity=-0.017 Sum_probs=44.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
..+.+.+.+.+... -.+.|.++++++.|..++. +++...|.+.+|+++.+|.||+++|.
T Consensus 198 ~~~~~~~~~~~~~~-l~~~gi~v~~~~~v~~v~~-~~~~~~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 198 AQFTKGWERLYGFG-TENALIEWHPGPDAAVVKT-DTEAMTVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp HHHHHHHHHHSCTT-STTCSEEEECTTTTCEEEE-ETTTTEEEETTSCEEECSEEEECCCE
T ss_pred ccccHHHHHHHHHH-HHhcCcEEEeCceEEEEEe-cccceEEEcCCCcEEEeeEEEEecCc
Confidence 34444555444311 1267889999999999998 67777888999999999999998875
No 112
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=87.41 E-value=0.52 Score=46.70 Aligned_cols=55 Identities=20% Similarity=0.249 Sum_probs=41.5
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCC----CcEEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCAD----GSQYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~----G~~~~ad~VIvtiP~~ 106 (373)
.+.+.+.+.+. +.|.+|+++++|++|+. +++++.|++.+ |+++.+|.||+++...
T Consensus 227 ~~~~~l~~~l~-----~~gV~i~~~~~v~~i~~-~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 227 DLVKVWQKQNE-----YRFDNIMVNTKTVAVEP-KEDGVYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp HHHHHHHHHHG-----GGEEEEECSCEEEEEEE-ETTEEEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred HHHHHHHHHHH-----hcCCEEEECCEEEEEEE-cCCeEEEEEeccCCCceEEEcCEEEECcCCC
Confidence 44455555554 56789999999999998 56666676655 6778999999998653
No 113
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=87.12 E-value=1 Score=45.57 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=35.1
Q ss_pred eEEcCCceEEEEecCC-CcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 66 KLLLNKEVTKINWEDA-NGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 66 ~I~ln~~V~~I~~~~~-~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
+|+++++|++++...+ .+|.|++.+|+++.||+||+|+-..
T Consensus 117 ~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 117 DIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp GEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSE
T ss_pred cEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 7999999999998332 3789999999899999999999853
No 114
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=87.09 E-value=0.89 Score=44.35 Aligned_cols=57 Identities=23% Similarity=0.309 Sum_probs=42.1
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEec-CCCcE-EEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWE-DANGV-LVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~-~~~~v-~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+|+++++|++|... .++++ .|.+.+|+++.+|.||+++...
T Consensus 191 ~~~~~~l~~~l~-----~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 191 PPVSAFYEHLHR-----EAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HHHHHHHHHHHH-----HHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHH-----hCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 345555555554 557899999999999861 13445 6778888899999999999863
No 115
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=87.06 E-value=0.77 Score=45.27 Aligned_cols=56 Identities=20% Similarity=0.265 Sum_probs=41.2
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCc-EEEEe-----CCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANG-VLVTC-----ADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~-v~v~~-----~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+|+++++|++|+. ++++ +.|+. .+++++.+|.||+|+...
T Consensus 220 ~~~~~~l~~~l~-----~~Gv~i~~~~~v~~i~~-~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 220 MEISKNFQRILQ-----KQGFKFKLNTKVTGATK-KSDGKIDVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp HHHHHHHHHHHH-----HTTCEEECSEEEEEEEE-CTTSCEEEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHH-----HCCCEEEeCceEEEEEE-cCCceEEEEEEecCCCCceEEEcCEEEECcCCC
Confidence 334455555554 56789999999999998 5555 76663 456689999999998764
No 116
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=86.83 E-value=0.67 Score=45.40 Aligned_cols=58 Identities=12% Similarity=0.001 Sum_probs=42.9
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEE-EEe--C-CCc--EEEcCEEEEcCCcccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVL-VTC--A-DGS--QYSADKVLITVSLGVF 108 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~-v~~--~-~G~--~~~ad~VIvtiP~~~l 108 (373)
..+.+.|.+.+. +.|++|+++++|++|.. +++++. |+. . +|+ ++.||.||.|.-....
T Consensus 100 ~~l~~~L~~~a~-----~~gv~i~~~~~v~~i~~-~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 100 PLYNQRVLKEAQ-----DRGVEIWDLTTAMKPIF-EDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHHHHHH-----HTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred HHHHHHHHHHHH-----HcCCEEEeCcEEEEEEE-ECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 456666766654 45689999999999998 666653 443 3 665 7899999999887643
No 117
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=86.79 E-value=1.1 Score=40.30 Aligned_cols=56 Identities=13% Similarity=0.223 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhCCCCCCCCC-CceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 44 YGNVLKLLLKQMPGQTPIDL-GKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 44 ~~~L~~~L~~~l~~~~~~~~-G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
...+.+.+.+.+. +. +.++. +++|++|.. .++++.|++.+|+++.+|+||+|+-..
T Consensus 55 ~~~~~~~~~~~~~-----~~~~v~~~-~~~v~~i~~-~~~~~~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 55 PGEIIAEARRQIE-----RYPTIHWV-EGRVTDAKG-SFGEFIVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp HHHHHHHHHHHHT-----TCTTEEEE-ESCEEEEEE-ETTEEEEEETTSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHH-----hcCCeEEE-EeEEEEEEE-cCCeEEEEECCCCEEEcCEEEECCCCC
Confidence 4577777777775 23 34443 569999998 677899999999889999999999874
No 118
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=86.70 E-value=0.99 Score=45.42 Aligned_cols=56 Identities=13% Similarity=0.313 Sum_probs=41.9
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEec------------------CCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWE------------------DANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~------------------~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
.+.+.+.+.+. +.|.+++++++|++|... .++++.+...+|+++.+|.||+|+...
T Consensus 193 ~~~~~l~~~l~-----~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 193 EMAGFAHQAIR-----DQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHHHHHH-----HTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHHHHHH-----HCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCc
Confidence 34444444443 457899999999999872 255677888888899999999998753
No 119
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=86.55 E-value=0.87 Score=44.78 Aligned_cols=55 Identities=13% Similarity=0.201 Sum_probs=42.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+|+++++|++|+. +++.+.|.+.+ .++.+|.||+|+...
T Consensus 216 ~~~~~~l~~~l~-----~~Gv~i~~~~~v~~i~~-~~~~~~v~~~~-~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 216 PAIGEAVTAAFR-----AEGIEVLEHTQASQVAH-MDGEFVLTTTH-GELRADKLLVATGRT 270 (467)
T ss_dssp HHHHHHHHHHHH-----HTTCEEETTCCEEEEEE-ETTEEEEEETT-EEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHH-----hCCCEEEcCCEEEEEEE-eCCEEEEEECC-cEEEcCEEEECCCCC
Confidence 345566666665 56799999999999998 66667777764 589999999998764
No 120
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=86.45 E-value=0.28 Score=50.05 Aligned_cols=57 Identities=23% Similarity=0.175 Sum_probs=45.1
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEe--CCC-cEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTC--ADG-SQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~--~~G-~~~~ad~VIvtiP~~~ 107 (373)
..|.+.|.+.+. +.|++|+++++|++|+. ++++|.|++ .+| +++++|.||.|--...
T Consensus 148 ~~l~~~L~~~a~-----~~gv~i~~~~~v~~l~~-~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 148 SRTEALLAEHAR-----EAGAEIPRGHEVTRLRQ-DAEAVEVTVAGPSGPYPVRARYGVGCDGGRS 207 (570)
T ss_dssp HHHHHHHHHHHH-----HHTEECCBSCEEEECCB-CSSCEEEEEEETTEEEEEEESEEEECSCSSC
T ss_pred HHHHHHHHHHHH-----hCCCEEEeCCEEEEEEE-cCCeEEEEEEeCCCcEEEEeCEEEEcCCCCc
Confidence 455666666554 44689999999999998 788888876 677 6899999999988764
No 121
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=85.89 E-value=0.82 Score=45.67 Aligned_cols=57 Identities=14% Similarity=0.140 Sum_probs=43.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCc---EEEEeCCCc--EEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANG---VLVTCADGS--QYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~---v~v~~~~G~--~~~ad~VIvtiP~~~ 107 (373)
..+.+.|.+.+. +.|++|+++++|++|.. ++++ |.+...+|+ ++.+|.||.|.-...
T Consensus 111 ~~l~~~L~~~a~-----~~Gv~i~~~~~V~~v~~-~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 111 ARFDDMLLRNSE-----RKGVDVRERHEVIDVLF-EGERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHH-----HTTCEEESSCEEEEEEE-ETTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHH-----hCCCEEEcCCEEEEEEE-ECCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 456666666654 45789999999999998 6665 455566674 789999999998864
No 122
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=85.50 E-value=1.3 Score=45.28 Aligned_cols=58 Identities=16% Similarity=0.232 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCC-CcEE-EEeC------CC---------cEEEcCEEEEcCCcc
Q psy7654 44 YGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDA-NGVL-VTCA------DG---------SQYSADKVLITVSLG 106 (373)
Q Consensus 44 ~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~-~~v~-v~~~------~G---------~~~~ad~VIvtiP~~ 106 (373)
...|.+.|.+.+. ++|++|+++++|++|.. ++ +.|. |.+. +| .++.||.||.|.-..
T Consensus 143 r~~l~~~L~~~a~-----~~Gv~i~~g~~v~~l~~-~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 143 LGHLVSWMGEQAE-----ALGVEVYPGYAAAEILF-HEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp HHHHHHHHHHHHH-----HTTCEEETTCCEEEEEE-CTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred HHHHHHHHHHHHH-----HcCCEEEcCCEEEEEEE-cCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 3477777877775 56799999999999998 54 4554 6665 33 579999999998876
Q ss_pred c
Q psy7654 107 V 107 (373)
Q Consensus 107 ~ 107 (373)
.
T Consensus 217 S 217 (584)
T 2gmh_A 217 G 217 (584)
T ss_dssp C
T ss_pred c
Confidence 4
No 123
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=85.47 E-value=1.1 Score=45.52 Aligned_cols=56 Identities=16% Similarity=0.062 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 44 YGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 44 ~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
-..+.+.+.+.+. +.|.++++++.|.++.. .++++.|...+++++.+|.|++|+--
T Consensus 262 D~ei~~~l~~~l~-----~~gi~~~~~~~v~~~~~-~~~~~~v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 262 DQQCAVKVKLYME-----EQGVMFKNGILPKKLTK-MDDKILVEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp CHHHHHHHHHHHH-----HTTCEEEETCCEEEEEE-ETTEEEEEETTSCEEEESEEEECSCE
T ss_pred chhHHHHHHHHHH-----hhcceeecceEEEEEEe-cCCeEEEEEcCCCeEEEEEEEEcccc
Confidence 3445666666665 56789999999999999 78889999888888999999999843
No 124
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=85.45 E-value=0.72 Score=42.64 Aligned_cols=54 Identities=19% Similarity=0.290 Sum_probs=42.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.|.+.+. +.|.++++++ |++|.. .++.+.|++ +|.++.+|+||+|+-..
T Consensus 70 ~~~~~~l~~~~~-----~~gv~~~~~~-v~~i~~-~~~~~~v~~-~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 70 VELTDKFRKQSE-----RFGTTIFTET-VTKVDF-SSKPFKLFT-DSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHH-----HTTCEEECCC-CCEEEC-SSSSEEEEC-SSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHH-----HCCCEEEEeE-EEEEEE-cCCEEEEEE-CCcEEEcCEEEECCCCC
Confidence 466666666554 4568999997 999998 677788888 77789999999999875
No 125
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=85.43 E-value=0.89 Score=44.67 Aligned_cols=55 Identities=33% Similarity=0.434 Sum_probs=40.0
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeC-CC--cEEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCA-DG--SQYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~-~G--~~~~ad~VIvtiP~~ 106 (373)
.+.+.+.+.+. +.|.+|+++++|++|+. +++++.+... +| +++.+|.||+++...
T Consensus 213 ~~~~~l~~~l~-----~~gv~i~~~~~v~~i~~-~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 213 DVSKEIEKQFK-----KLGVTILTATKVESIAD-GGSQVTVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp HHHHHHHHHHH-----HHTCEEECSCEEEEEEE-CSSCEEEEEESSSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHH-----HcCCEEEeCcEEEEEEE-cCCeEEEEEEcCCceEEEEcCEEEECCCCC
Confidence 34444444444 45789999999999998 5666777654 55 578999999998753
No 126
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.18 E-value=0.66 Score=45.50 Aligned_cols=55 Identities=24% Similarity=0.302 Sum_probs=40.4
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeC---CCcEEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCA---DGSQYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~---~G~~~~ad~VIvtiP~~ 106 (373)
.+.+.+.+.+. +.|.+|+++++|++|+. +++++.++.. +++++.+|.||+|+...
T Consensus 212 ~~~~~l~~~l~-----~~gv~i~~~~~v~~i~~-~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 212 QMAAIIKKRLK-----KKGVEVVTNALAKGAEE-REDGVTVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp HHHHHHHHHHH-----HTTCEEEESEEEEEEEE-ETTEEEEEEEETTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHH-----HCCCEEEeCCEEEEEEE-eCCeEEEEEEeCCceeEEEcCEEEECcCCC
Confidence 44455555554 45789999999999997 5666766653 34678999999998764
No 127
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=84.55 E-value=0.97 Score=44.69 Aligned_cols=55 Identities=18% Similarity=0.221 Sum_probs=38.7
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCc-----EEEcCEEEEcCCc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGS-----QYSADKVLITVSL 105 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~-----~~~ad~VIvtiP~ 105 (373)
.+.+.+.+.+. +.|.+|+++++|++|+...++.+.|++.+++ ++.+|.||+++..
T Consensus 228 ~~~~~l~~~l~-----~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 228 QMAELVAASME-----ERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp HHHHHHHHHHH-----HTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred HHHHHHHHHHH-----hCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 34444555554 4578999999999999833445666655443 6899999999865
No 128
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=84.55 E-value=1.1 Score=45.88 Aligned_cols=58 Identities=24% Similarity=0.274 Sum_probs=44.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeC-CC--cEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCA-DG--SQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~-~G--~~~~ad~VIvtiP~~~ 107 (373)
..+.+.|.+.+. +.|++|+.+++|++|...+++.+.|++. +| .++.||.||.|.-...
T Consensus 128 ~~l~~~L~~~a~-----~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 128 EEFDKLLLDEAR-----SRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHH-----HTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHH-----hCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 456666666664 4578999999999999833556777776 66 5789999999997754
No 129
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=84.20 E-value=0.73 Score=44.34 Aligned_cols=51 Identities=22% Similarity=0.245 Sum_probs=39.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
..+.+.+.+.+. ++|.+++++++|++|+. ++ |.+.+|+++.+|.||++++.
T Consensus 218 ~~~~~~~~~~l~-----~~gV~~~~~~~v~~i~~---~~--v~~~~g~~~~~D~vi~a~G~ 268 (409)
T 3h8l_A 218 PNSRKAVASIYN-----QLGIKLVHNFKIKEIRE---HE--IVDEKGNTIPADITILLPPY 268 (409)
T ss_dssp HHHHHHHHHHHH-----HHTCEEECSCCEEEECS---SE--EEETTSCEEECSEEEEECCE
T ss_pred HHHHHHHHHHHH-----HCCCEEEcCCceEEECC---Ce--EEECCCCEEeeeEEEECCCC
Confidence 345555555554 56789999999999965 23 66678889999999999876
No 130
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=83.82 E-value=0.92 Score=44.53 Aligned_cols=55 Identities=24% Similarity=0.378 Sum_probs=39.9
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeC---CC--cEEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCA---DG--SQYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~---~G--~~~~ad~VIvtiP~~ 106 (373)
.+.+.+.+.+. +.|.+|+++++|++|+. +++++.|+.. +| +++.+|.||+|+...
T Consensus 219 ~~~~~l~~~l~-----~~gv~i~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 219 EIRKQFQRSLE-----KQGMKFKLKTKVVGVDT-SGDGVKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp HHHHHHHHHHH-----HSSCCEECSEEEEEEEC-SSSSEEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred HHHHHHHHHHH-----HcCCEEEeCCEEEEEEE-cCCeEEEEEEecCCCcceEEECCEEEECCCCC
Confidence 44455555554 45789999999999997 5666666643 44 578999999998764
No 131
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=83.81 E-value=1.2 Score=40.88 Aligned_cols=54 Identities=11% Similarity=0.319 Sum_probs=43.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeC---CCcEEEcCEEEEcCCc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCA---DGSQYSADKVLITVSL 105 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~---~G~~~~ad~VIvtiP~ 105 (373)
..+.+.|.+.+. +.|.++++++ |++|.. .++.+.+.+. ++.++.+|+||+|+-.
T Consensus 84 ~~~~~~~~~~~~-----~~gv~i~~~~-v~~i~~-~~~~~~v~~~~~~~~~~~~~d~vvlAtG~ 140 (338)
T 3itj_A 84 SELMDRMREQST-----KFGTEIITET-VSKVDL-SSKPFKLWTEFNEDAEPVTTDAIILATGA 140 (338)
T ss_dssp HHHHHHHHHHHH-----HTTCEEECSC-EEEEEC-SSSSEEEEETTCSSSCCEEEEEEEECCCE
T ss_pred HHHHHHHHHHHH-----HcCCEEEEeE-EEEEEE-cCCEEEEEEEecCCCcEEEeCEEEECcCC
Confidence 466666666655 4568999999 999998 7888888873 6678999999999876
No 132
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=83.32 E-value=1.7 Score=42.02 Aligned_cols=51 Identities=20% Similarity=0.328 Sum_probs=38.4
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
.+.+.+.+.+. +.|.+|+++++|++|+ + + .|++.+|+++.+|.||+++...
T Consensus 188 ~~~~~l~~~l~-----~~GV~i~~~~~v~~i~-~-~---~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 188 TLADFVARYHA-----AQGVDLRFERSVTGSV-D-G---VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHHHHH-----HTTCEEEESCCEEEEE-T-T---EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHH-----HcCcEEEeCCEEEEEE-C-C---EEEECCCCEEEcCEEEECcCCC
Confidence 34445555554 5679999999999998 2 2 5666788899999999998763
No 133
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=83.31 E-value=0.26 Score=46.14 Aligned_cols=40 Identities=33% Similarity=0.419 Sum_probs=30.0
Q ss_pred CCceEEEeccccCCCC----cc-hhhHHHHHHHHHHHHHHhhCCC
Q psy7654 333 GKQVLLFAGEASNEHQ----YG-TVNGAVETGWREADRILKSDPA 372 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~----~g-~veGA~~SG~~AA~~i~~~~~~ 372 (373)
+.|+||.|||...... .| ..-|++.||++||+.|++.|.+
T Consensus 282 ~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~laa 326 (326)
T 3fpz_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFAA 326 (326)
T ss_dssp TSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 4468999999864221 23 4567889999999999998754
No 134
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=83.19 E-value=1.6 Score=43.86 Aligned_cols=56 Identities=16% Similarity=0.210 Sum_probs=43.5
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCc--EEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANG--VLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~--v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..+.+.|.+.+. +.|++++.+ +|++|.. ++++ +.|++.+|+++.+|.||.|.-...
T Consensus 165 ~~l~~~L~~~a~-----~~gv~~~~~-~v~~i~~-~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 165 HLVADFLKRWAV-----ERGVNRVVD-EVVDVRL-NNRGYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEEC-CEEEEEE-CTTSCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHH-----HCCCEEEEe-eEeEEEE-cCCCcEEEEEECCCcEEEeCEEEECCCCch
Confidence 566667766664 457899999 8999998 5443 578888888899999999998764
No 135
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=83.00 E-value=0.73 Score=46.85 Aligned_cols=58 Identities=19% Similarity=0.104 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE-EEEeC---CC--cEEEcCEEEEcCCccc
Q psy7654 44 YGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV-LVTCA---DG--SQYSADKVLITVSLGV 107 (373)
Q Consensus 44 ~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v-~v~~~---~G--~~~~ad~VIvtiP~~~ 107 (373)
-..|..+|++.+. +.|++|+.+++|++|.. +++++ .|.+. +| .++.|+.||+|+-++.
T Consensus 169 ~~~l~~~L~~~a~-----~~G~~i~~~~~V~~l~~-~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 169 DARLTLEIMKEAV-----ARGAVALNYMKVESFIY-DQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHH-----HTTCEEEESEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHH-----HcCCEEEcCCEEEEEEE-cCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 3678888887765 66899999999999998 66664 35543 33 3689999999998865
No 136
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=82.84 E-value=1.7 Score=43.64 Aligned_cols=57 Identities=12% Similarity=0.149 Sum_probs=44.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecC--CCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWED--ANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~--~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.|.+.+. +.|.+++++++|++|.... ++.+.|++.+|+++.+|+||+|+-..
T Consensus 267 ~~l~~~l~~~~~-----~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 267 QKLAGALKAHVS-----DYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHHHH-----TSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHH-----HcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 456666766665 5678999999999998621 23688888888899999999999864
No 137
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=82.75 E-value=1.4 Score=42.92 Aligned_cols=43 Identities=14% Similarity=0.166 Sum_probs=35.4
Q ss_pred CCceEEcCCceEEEEecCCCcEEEEeC---CCcE--EEcCEEEEcCCcc
Q psy7654 63 LGKKLLLNKEVTKINWEDANGVLVTCA---DGSQ--YSADKVLITVSLG 106 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~~v~v~~~---~G~~--~~ad~VIvtiP~~ 106 (373)
.|.+|+++++|++|+. .++++.|+.. +|+. +.+|.||+|+-..
T Consensus 329 ~~v~i~~~~~v~~v~~-~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATA-TAQGIELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEE-ETTEEEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEe-cCCEEEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 4689999999999998 6778877765 6654 8999999998763
No 138
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=82.67 E-value=1.1 Score=44.28 Aligned_cols=55 Identities=27% Similarity=0.318 Sum_probs=39.7
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCC---C--cEEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCAD---G--SQYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~---G--~~~~ad~VIvtiP~~ 106 (373)
.+.+.+.+.+. +.|.+|+++++|++|+. .++++.|...+ | +++.+|.||+|+...
T Consensus 240 ~~~~~l~~~l~-----~~gV~v~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 240 EVAKQLQRMLT-----KQGIDFKLGAKVTGAVK-SGDGAKVTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp HHHHHHHHHHH-----HTTCEEECSEEEEEEEE-ETTEEEEEEEETTSCCCEEEEESEEEECCCCE
T ss_pred HHHHHHHHHHH-----hCCCEEEECCeEEEEEE-eCCEEEEEEEecCCCceEEEEcCEEEEeeCCc
Confidence 34444444444 45789999999999998 67776665542 4 578999999998753
No 139
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=82.18 E-value=1.5 Score=44.45 Aligned_cols=54 Identities=13% Similarity=0.233 Sum_probs=40.6
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+|+++++|++|+. .+++ |...+|+++.+|.||+|+...
T Consensus 228 ~~~~~~l~~~l~-----~~GV~i~~~~~v~~i~~-~~~~--v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 228 YEMAAYVHEHMK-----NHDVELVFEDGVDALEE-NGAV--VRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHHHHHH-----HTTCEEECSCCEEEEEG-GGTE--EEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHH-----HcCCEEEECCeEEEEec-CCCE--EEECCCCEEEcCEEEEccCCC
Confidence 345555555554 56789999999999987 4454 555778899999999998753
No 140
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=82.17 E-value=1.8 Score=41.64 Aligned_cols=40 Identities=23% Similarity=0.277 Sum_probs=33.5
Q ss_pred CCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 63 LGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
.|.+++++++|++|.. .+. .|++.+|+++.+|+||+|+-.
T Consensus 75 ~~i~~~~~~~V~~id~-~~~--~v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 75 NNIKVITSEFATSIDP-NNK--LVTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp TTCEEECSCCEEEEET-TTT--EEEETTSCEEECSEEEECCCE
T ss_pred CCCEEEeCCEEEEEEC-CCC--EEEECCCCEEECCEEEEecCC
Confidence 4689999999999987 454 466678889999999999975
No 141
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=82.10 E-value=0.86 Score=45.00 Aligned_cols=56 Identities=14% Similarity=0.188 Sum_probs=39.1
Q ss_pred HHHHHHHHHhCCCCCCCCCCce--EEcCCceEEEEecCCC--cEEEEeCC---C--cEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKK--LLLNKEVTKINWEDAN--GVLVTCAD---G--SQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~--I~ln~~V~~I~~~~~~--~v~v~~~~---G--~~~~ad~VIvtiP~~ 106 (373)
..+.+.|.+.+. ..|.+ |+++++|++|+. .++ +|.|++.+ | .++.+|+||+|+-..
T Consensus 101 ~~l~~~l~~~~~-----~~gv~~~i~~~~~V~~v~~-~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~ 165 (464)
T 2xve_A 101 EVLWDYIKGRVE-----KAGVRKYIRFNTAVRHVEF-NEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHF 165 (464)
T ss_dssp HHHHHHHHHHHH-----HHTCGGGEECSEEEEEEEE-ETTTTEEEEEEEETTTTEEEEEEESEEEECCCSS
T ss_pred HHHHHHHHHHHH-----HcCCcceEEeCCEEEEEEE-cCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCC
Confidence 455555554433 23345 999999999998 444 67777654 4 468999999999863
No 142
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=81.57 E-value=2 Score=41.83 Aligned_cols=54 Identities=22% Similarity=0.303 Sum_probs=39.9
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV-LVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v-~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+|+++++|++|.. + +++ .|.+ +|.++.+|.||+|+...
T Consensus 191 ~~~~~~l~~~l~-----~~gv~i~~~~~v~~i~~-~-~~v~~v~~-~~~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 191 KEFTDVLTEEME-----ANNITIATGETVERYEG-D-GRVQKVVT-DKNAYDADLVVVAVGVR 245 (447)
T ss_dssp HHHHHHHHHHHH-----TTTEEEEESCCEEEEEC-S-SBCCEEEE-SSCEEECSEEEECSCEE
T ss_pred HHHHHHHHHHHH-----hCCCEEEcCCEEEEEEc-c-CcEEEEEE-CCCEEECCEEEECcCCC
Confidence 345556666665 56799999999999987 4 443 4555 45689999999999763
No 143
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=81.47 E-value=2.3 Score=42.14 Aligned_cols=53 Identities=23% Similarity=0.443 Sum_probs=38.8
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV-LVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v-~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
.+.+.+.+.+. +.|.+|+++++|++|+. + +++ .|.+ +|+++.+|.||+|+...
T Consensus 237 ~~~~~l~~~l~-----~~GV~i~~~~~v~~i~~-~-~~v~~v~~-~g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 237 DLTDLMAKNME-----EHGIQLAFGETVKEVAG-N-GKVEKIIT-DKNEYDVDMVILAVGFR 290 (490)
T ss_dssp HHHHHHHHHHH-----TTTCEEEETCCEEEEEC-S-SSCCEEEE-SSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHH-----hCCeEEEeCCEEEEEEc-C-CcEEEEEE-CCcEEECCEEEECCCCC
Confidence 44555555554 56899999999999986 3 333 3555 66789999999998753
No 144
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=81.26 E-value=1.7 Score=44.04 Aligned_cols=42 Identities=14% Similarity=0.055 Sum_probs=35.5
Q ss_pred ceEEcCCceEEEEecC-CCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 65 KKLLLNKEVTKINWED-ANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 65 ~~I~ln~~V~~I~~~~-~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..|+++++|++++... .+.|.|++.+|+++.||+||+|+-..
T Consensus 104 ~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 104 KHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPL 146 (545)
T ss_dssp GGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSC
T ss_pred CcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCC
Confidence 3799999999999833 24689999999899999999999853
No 145
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=81.12 E-value=1.6 Score=42.62 Aligned_cols=44 Identities=9% Similarity=0.057 Sum_probs=33.3
Q ss_pred CCCceEEcCCceEEEEecC--CCc--EEEEeCCCc----EEEcCEEEEcCCc
Q psy7654 62 DLGKKLLLNKEVTKINWED--ANG--VLVTCADGS----QYSADKVLITVSL 105 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~--~~~--v~v~~~~G~----~~~ad~VIvtiP~ 105 (373)
.+|.+|+++++|++|+... ++. +.|++.+|+ ++.+|+||+|+-.
T Consensus 139 ~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 139 HFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp TCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 3457899999999999821 333 367766665 7899999999875
No 146
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=80.77 E-value=2.5 Score=41.93 Aligned_cols=55 Identities=15% Similarity=0.016 Sum_probs=40.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeC--CC--cEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCA--DG--SQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~--~G--~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +. .+|+++++|++|+. .++++.|+.. +| +++.+|.||+|+...
T Consensus 215 ~~~~~~l~~~l~-----~~-V~i~~~~~v~~i~~-~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 215 EEMKRYAEKTFN-----EE-FYFDAKARVISTIE-KEDAVEVIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp HHHHHHHHHHHH-----TT-SEEETTCEEEEEEE-CSSSEEEEEECTTCCEEEEEESEEEECSCCE
T ss_pred HHHHHHHHHHHh-----hC-cEEEECCEEEEEEE-cCCEEEEEEEeCCCceEEEECCEEEEeeCCc
Confidence 445555555554 22 78999999999998 6777777764 66 578999999998753
No 147
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=79.94 E-value=1.9 Score=39.29 Aligned_cols=54 Identities=9% Similarity=0.337 Sum_probs=40.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.++++++ |++|.. .++.+.| +.+|+++.+|+||+|+-..
T Consensus 62 ~~~~~~~~~~~~-----~~~~~~~~~~-v~~i~~-~~~~~~v-~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 62 PLLMERMHEHAT-----KFETEIIFDH-INKVDL-QNRPFRL-NGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp HHHHHHHHHHHH-----HTTCEEECCC-EEEEEC-SSSSEEE-EESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHH-----HCCCEEEEee-eeEEEe-cCCEEEE-EeCCCEEEcCEEEECCCCC
Confidence 455565555544 4468899997 999998 6777887 5577789999999998763
No 148
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=79.92 E-value=2.9 Score=38.23 Aligned_cols=42 Identities=7% Similarity=0.091 Sum_probs=31.9
Q ss_pred CceEEcCCceEEEEecCCCcEE-EEeCC-----CcEEEcCEEEEcCCcc
Q psy7654 64 GKKLLLNKEVTKINWEDANGVL-VTCAD-----GSQYSADKVLITVSLG 106 (373)
Q Consensus 64 G~~I~ln~~V~~I~~~~~~~v~-v~~~~-----G~~~~ad~VIvtiP~~ 106 (373)
|.+|+++++|++|.. +++++. |+..+ +.++.+|.||+++...
T Consensus 223 gv~i~~~~~v~~i~~-~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 223 KIEILYNTVALEAKG-DGKLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp TEEEECSEEEEEEEE-SSSSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred CeEEeecceeEEEEc-ccCcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 689999999999998 555432 44433 3578999999998863
No 149
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=79.66 E-value=2.1 Score=42.07 Aligned_cols=55 Identities=15% Similarity=0.096 Sum_probs=39.2
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCc--EEEEeCC---C----cEEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANG--VLVTCAD---G----SQYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~--v~v~~~~---G----~~~~ad~VIvtiP~~ 106 (373)
.+.+.+.+.+. +.|.+|+++++|++|+. .+++ +.|.+.+ | +++.+|.||+++...
T Consensus 229 ~~~~~~~~~l~-----~~gv~i~~~~~v~~i~~-~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 229 MISTNCTEELE-----NAGVEVLKFSQVKEVKK-TLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp HHHHHHHHHHH-----HTTCEEETTEEEEEEEE-CSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHH-----HCCCEEEeCCEEEEEEE-cCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccc
Confidence 34444444444 45789999999999998 5444 6666654 2 568999999998753
No 150
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=79.56 E-value=2.6 Score=42.16 Aligned_cols=56 Identities=14% Similarity=0.182 Sum_probs=41.6
Q ss_pred HHHHHHHHHhCCCCCCCC-CCceEEcCCceEEEEecCCCc--EEEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPID-LGKKLLLNKEVTKINWEDANG--VLVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~-~G~~I~ln~~V~~I~~~~~~~--v~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..+.+.|.+.+. + .|++++.+ .|++|.. ++++ +.|++.+|.++.+|.||.|.-...
T Consensus 175 ~~l~~~L~~~a~-----~~~Gv~i~~~-~v~~i~~-~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 175 AKFSQLLTEHCT-----QKLGVTHIRD-HVSQIIN-NQHGDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHH-----HTSCCEEEEC-CEEEEEE-CTTSCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHH-----hcCCCEEEEe-EEEEEEe-cCCCcEEEEEECCCCEEEcCEEEECCCcch
Confidence 345566665554 3 57899999 5999998 5443 467777777899999999998864
No 151
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=79.37 E-value=3.2 Score=38.15 Aligned_cols=56 Identities=18% Similarity=0.110 Sum_probs=39.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeC---CC--cEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCA---DG--SQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~---~G--~~~~ad~VIvtiP~~ 106 (373)
..+.+.|.+.+. +.|.++++++.|++|.. +++...|... +| +++.+|.||+++...
T Consensus 191 ~~~~~~l~~~l~-----~~gv~v~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 191 EASVKELMKAHE-----EGRLEVLTPYELRRVEG-DERVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHHHHHH-----TTSSEEETTEEEEEEEE-SSSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHHhccc-----cCCeEEecCCcceeEcc-CCCeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 455566666554 45789999999999998 5442234433 56 578999999998764
No 152
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=79.16 E-value=4 Score=37.24 Aligned_cols=56 Identities=16% Similarity=0.227 Sum_probs=40.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
..+.+.+.+++. +.+....++..|..+....++.+.|.+.+|+++.+|+||+|+-.
T Consensus 60 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs 115 (304)
T 4fk1_A 60 EEFKEIGLNEVM-----KYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGM 115 (304)
T ss_dssp HHHHHHHHHHHT-----TSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHH-----hcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCC
Confidence 456666666554 33455556667777776455668899999999999999999875
No 153
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=78.91 E-value=1.1 Score=44.67 Aligned_cols=59 Identities=17% Similarity=0.141 Sum_probs=43.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEec--CCCcEEEEe--C-CC--cEEEcCEEEEcCCcccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWE--DANGVLVTC--A-DG--SQYSADKVLITVSLGVF 108 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~--~~~~v~v~~--~-~G--~~~~ad~VIvtiP~~~l 108 (373)
..|.+.|.+.+. +.|++|+++++|++|... +++.+.|++ . +| .++.+|.||+|.-....
T Consensus 166 ~~l~~~L~~~~~-----~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 166 RQLQLLLLKVAL-----LLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHHHHHHHH-----hCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 566666666664 456899999999999872 134567766 4 55 46899999999887643
No 154
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=78.59 E-value=2.2 Score=39.21 Aligned_cols=55 Identities=16% Similarity=0.286 Sum_probs=41.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecC--CCc-EEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWED--ANG-VLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~--~~~-v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+++. ++|++|.. . ++. +.|.+.+|+++.+|+||+|+-..
T Consensus 65 ~~~~~~l~~~~~-----~~gv~~~~-~~v~~i~~-~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 65 MELAQRMHQQAE-----KFGAKVEM-DEVQGVQH-DATSHPYPFTVRGYNGEYRAKAVILATGAD 122 (325)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEE-CCEEEEEE-CTTSSSCCEEEEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHH-----HcCCEEEe-eeEEEEEe-ccCCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 456666665554 45678887 68999998 4 443 77777788889999999999763
No 155
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=78.35 E-value=1.9 Score=42.47 Aligned_cols=55 Identities=22% Similarity=0.238 Sum_probs=38.2
Q ss_pred HHHHHHHhCCCCCCCCCCceEEcCCceEEEEec-CCCcEEEEeC-----CCcEEEcCEEEEcCCcc
Q psy7654 47 VLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWE-DANGVLVTCA-----DGSQYSADKVLITVSLG 106 (373)
Q Consensus 47 L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~-~~~~v~v~~~-----~G~~~~ad~VIvtiP~~ 106 (373)
+.+.+.+.+. +.|.+|+++++|++|... +++.+.|... +++++.+|.||+|+...
T Consensus 226 ~~~~l~~~l~-----~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 226 VAKATQKFLK-----KQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp HHHHHHHHHH-----HTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHH-----HCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCC
Confidence 4444555444 457899999999999862 2344556554 34678999999998753
No 156
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=78.30 E-value=2 Score=37.83 Aligned_cols=36 Identities=22% Similarity=0.158 Sum_probs=30.4
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhCC
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSDP 371 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~~ 371 (373)
..|+||.|||.. . .|....|+++|..+|+.|++.|+
T Consensus 197 ~~p~iya~G~~a-~--~g~~~~~~~~g~~~a~~i~~~l~ 232 (232)
T 2cul_A 197 RLEGLYAVGLCV-R--EGDYARMSEEGKRLAEHLLHELG 232 (232)
T ss_dssp TSBSEEECGGGT-S--CCCHHHHHHHHHHHHHHHHHHC-
T ss_pred ccccceeeeecc-c--CccHHHHHHHHHHHHHHHHhhcC
Confidence 456899999988 3 56888999999999999998774
No 157
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=78.29 E-value=2.4 Score=38.60 Aligned_cols=57 Identities=12% Similarity=0.059 Sum_probs=39.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE-EEEeC---------CC-----cEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV-LVTCA---------DG-----SQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v-~v~~~---------~G-----~~~~ad~VIvtiP~~ 106 (373)
..+...|.+.+.+ ..|.+|+++++|++|.. +++++ .|.+. +| .++.+|.||+|+-..
T Consensus 119 ~~~~~~l~~~~~~----~~gv~i~~~~~V~~i~~-~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 119 ALFTSTIMSKLLA----RPNVKLFNAVAAEDLIV-KGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp HHHHHHHHHHHHT----STTEEEEETEEEEEEEE-ETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSS
T ss_pred HHHHHHHHHHHHh----cCCCEEEcCcEEEEEEe-cCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCc
Confidence 5666777766642 35789999999999998 56654 23321 22 468999999998753
No 158
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=78.17 E-value=1.6 Score=44.36 Aligned_cols=57 Identities=14% Similarity=0.129 Sum_probs=42.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE-EEEeC---CCc--EEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV-LVTCA---DGS--QYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v-~v~~~---~G~--~~~ad~VIvtiP~~~ 107 (373)
..++.+|++.+. +.|++|+.+++|++|.. +++++ .|... +|+ ++.||.||+|+-++.
T Consensus 188 ~~l~~~l~~~a~-----~~Ga~i~~~t~V~~l~~-~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAA-----EDGAYLVSKMKAVGFLY-EGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHH-----HTTCEEESSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHH-----HcCCeEEeccEEEEEEE-eCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 567777777665 67899999999999998 56553 34432 343 689999999998874
No 159
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=78.07 E-value=2.3 Score=39.36 Aligned_cols=54 Identities=17% Similarity=0.276 Sum_probs=40.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEE-EeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLV-TCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v-~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.|.+.+. +.|.++++++ |++|.. ++.+.| .+.+|+++.+|+||+|+-..
T Consensus 71 ~~~~~~l~~~~~-----~~~v~~~~~~-v~~i~~--~~~~~v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 71 PELMDEMREQAL-----RFGADLRMED-VESVSL--HGPLKSVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp HHHHHHHHHHHH-----HTTCEEECCC-EEEEEC--SSSSEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHH-----HcCCEEEEee-EEEEEe--CCcEEEEEeCCCCEEEeCEEEECCCCC
Confidence 456666655554 4568999997 999986 445677 77788889999999998763
No 160
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=77.95 E-value=1.7 Score=39.98 Aligned_cols=39 Identities=8% Similarity=0.064 Sum_probs=30.9
Q ss_pred CCceEEEec--cccCCCCcchhhHHHHHHHHHHHHHHhhCCC
Q psy7654 333 GKQVLLFAG--EASNEHQYGTVNGAVETGWREADRILKSDPA 372 (373)
Q Consensus 333 ~~~~i~fAG--d~~s~~~~g~veGA~~SG~~AA~~i~~~~~~ 372 (373)
+.|+||.+| |.+. ..++.+.+|...|..||..|.+.|..
T Consensus 313 ~~~~vya~Gd~d~~~-~~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 313 AVPSVWLLGYGDWNG-MASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp SCTTEEECSSCGGGS-TTCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred CCCCeEEeccccccc-cchhhhhhhHHHHHHHHHHHHHHHHh
Confidence 446899999 5544 24578899999999999999998763
No 161
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=77.93 E-value=2.6 Score=39.32 Aligned_cols=43 Identities=7% Similarity=0.213 Sum_probs=34.2
Q ss_pred CCC-ceEEcCCceEEEEecCCCcEEEEeCCCcEEE-cCEEEEcCCc
Q psy7654 62 DLG-KKLLLNKEVTKINWEDANGVLVTCADGSQYS-ADKVLITVSL 105 (373)
Q Consensus 62 ~~G-~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~-ad~VIvtiP~ 105 (373)
+.| .+++++++|.+|+. .++++.|.+.+|+++. +|.||+++..
T Consensus 226 ~~g~v~~~~~~~v~~i~~-~~~~~~v~~~~g~~~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 226 QGARIEMNVHYTVKDIDF-NNGQYHISFDSGQSVHTPHEPILATGF 270 (369)
T ss_dssp TTCCEEEECSCCEEEEEE-ETTEEEEEESSSCCEEESSCCEECCCB
T ss_pred hCCcEEEecCcEEEEEEe-cCCceEEEecCCeEeccCCceEEeecc
Confidence 455 89999999999987 5667778888887664 6999998765
No 162
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=77.92 E-value=3.4 Score=42.55 Aligned_cols=57 Identities=12% Similarity=0.208 Sum_probs=43.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE---EEEe-CCCc--EEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV---LVTC-ADGS--QYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v---~v~~-~~G~--~~~ad~VIvtiP~~~ 107 (373)
..|+++|.+.+. +.|++|+.+++|++|.. +++++ .+.. .+|+ ++.|++||+|+--..
T Consensus 155 ~~l~~~L~~~~~-----~~gv~i~~~~~v~~Li~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSL-----RYDTSYFVEYFALDLLM-ENGECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHT-----TSCCEEEETEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHH-----hCCCEEEEceEEEEEEE-ECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 478899988876 56899999999999998 55553 3333 4665 578999999987653
No 163
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=77.63 E-value=3.2 Score=37.99 Aligned_cols=54 Identities=22% Similarity=0.245 Sum_probs=41.5
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.++++ .+|++|.. .++.+.|.+ ++.++.+|+||+|+-..
T Consensus 72 ~~~~~~~~~~~~-----~~~v~~~~-~~v~~i~~-~~~~~~v~~-~~~~~~~~~li~AtG~~ 125 (319)
T 3cty_A 72 SELAKLFADHAA-----NYAKIREG-VEVRSIKK-TQGGFDIET-NDDTYHAKYVIITTGTT 125 (319)
T ss_dssp HHHHHHHHHHHH-----TTSEEEET-CCEEEEEE-ETTEEEEEE-SSSEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHH-----HcCCEEEE-eeEEEEEE-eCCEEEEEE-CCCEEEeCEEEECCCCC
Confidence 456676766665 45688888 79999998 667777877 55689999999998863
No 164
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=77.41 E-value=3.2 Score=40.73 Aligned_cols=53 Identities=19% Similarity=0.266 Sum_probs=40.6
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCC-CcEEEEeC--CCc--EEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDA-NGVLVTCA--DGS--QYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~-~~v~v~~~--~G~--~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. .+|+++++|++|.. .+ +++.|... +|+ ++.+|.||+|+...
T Consensus 214 ~~~~~~l~~~l~--------v~i~~~~~v~~i~~-~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 214 QDIVNTLLSILK--------LNIKFNSPVTEVKK-IKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp HHHHHHHHHHHC--------CCEECSCCEEEEEE-EETTEEEEEECCTTSCCEEEEESCEEECCCEE
T ss_pred HHHHHHHHhcCE--------EEEEECCEEEEEEE-cCCCcEEEEEEecCCceEEEEcCEEEECcCCC
Confidence 455555555543 67999999999998 55 77878776 565 78999999999763
No 165
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=77.28 E-value=3.5 Score=42.65 Aligned_cols=57 Identities=19% Similarity=0.144 Sum_probs=42.8
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV-LVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v-~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..+.+.|.+.+.+ ..|.+| ++++|++|.. ++++| .|.+.+|.++.|++||+|+-...
T Consensus 123 ~~~~~~L~~~Le~----~~GVeI-~~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 123 KRYREYMKKVCEN----QENLYI-KQEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHHHT----CTTEEE-EESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHHHh----CCCCEE-EEeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 3566666666642 135788 6889999998 66766 58888888999999999998753
No 166
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=76.84 E-value=3.3 Score=40.78 Aligned_cols=53 Identities=23% Similarity=0.342 Sum_probs=38.4
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV-LVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v-~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
.+.+.+.+.+. +.|.+|+++++|++|.. + +++ .+.+. +.++.+|.||+|+...
T Consensus 228 ~~~~~l~~~l~-----~~Gv~i~~~~~v~~i~~-~-~~v~~v~~~-~~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 228 DMAEYIYKEAD-----KHHIEILTNENVKAFKG-N-ERVEAVETD-KGTYKADLVLVSVGVK 281 (480)
T ss_dssp HHHHHHHHHHH-----HTTCEEECSCCEEEEEE-S-SBEEEEEET-TEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHH-----HcCcEEEcCCEEEEEEc-C-CcEEEEEEC-CCEEEcCEEEECcCCC
Confidence 44455555554 56789999999999987 4 344 45554 4489999999998753
No 167
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=76.13 E-value=2.8 Score=41.40 Aligned_cols=57 Identities=23% Similarity=0.228 Sum_probs=39.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCC---Cc--EEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCAD---GS--QYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~---G~--~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+|+++++|++|....++.+.|+..+ |+ ++.+|.||+++...
T Consensus 225 ~~~~~~l~~~l~-----~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 225 QQMSSLVTEHME-----SHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHH-----HCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 344555555554 45789999999999987334456665433 54 46899999998753
No 168
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=75.89 E-value=3.9 Score=41.88 Aligned_cols=57 Identities=18% Similarity=0.146 Sum_probs=43.7
Q ss_pred HHHHHHHHHhCCCCCCCCCC-ceEEcCCceEEEEecCCCcE---EEE-eCCCc--EEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLG-KKLLLNKEVTKINWEDANGV---LVT-CADGS--QYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G-~~I~ln~~V~~I~~~~~~~v---~v~-~~~G~--~~~ad~VIvtiP~~~ 107 (373)
..|.+.|.+.+. +.| .+|+.+++|++|.. +++++ .+. ..+|+ ++.++.||+|+-...
T Consensus 134 ~~l~~~L~~~~~-----~~gnv~i~~~~~v~~l~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSL-----QFPQIQRFDEHFVLDILV-DDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHT-----TCTTEEEEETEEEEEEEE-ETTEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHH-----hCCCcEEEeCCEEEEEEE-eCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 578888988876 567 89999999999998 55643 333 35675 689999999987653
No 169
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=75.81 E-value=3.6 Score=40.79 Aligned_cols=57 Identities=12% Similarity=0.132 Sum_probs=42.0
Q ss_pred cCCcHHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 40 KKGGYGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 40 ~~gG~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
+-+|...+-+.|. ++|++|++++.|++|.. ++....|.+.+|+++.+|.||+++...
T Consensus 256 iGgG~~gle~~l~---------~~GV~v~~~~~v~~i~~-~~~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 256 TGSKADEVIQELE---------RWGIDYVHIPNVKRVEG-NEKVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp ESTTHHHHHHHHH---------HHTCEEEECSSEEEEEC-SSSCCEEEETTCCEEECSEEEECCCEE
T ss_pred ECCCHHHHHHHHH---------hCCcEEEeCCeeEEEec-CCceEEEEeCCCeEEEeCEEEECCCcC
Confidence 3566655543332 34689999999999987 444445677788899999999998764
No 170
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=75.72 E-value=1.9 Score=41.83 Aligned_cols=53 Identities=15% Similarity=0.152 Sum_probs=37.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeC--CCcEEEcCEEEEcCCc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCA--DGSQYSADKVLITVSL 105 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~--~G~~~~ad~VIvtiP~ 105 (373)
..+.+.+.+.+. ++|.++++|++|++|+. +++.+... +++++.+|.||++++.
T Consensus 200 ~~~~~~l~~~l~-----~~GV~i~~~~~v~~v~~---~~v~~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 200 GASKRLVEDLFA-----ERNIDWIANVAVKAIEP---DKVIYEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp TTHHHHHHHHHH-----HTTCEEECSCEEEEECS---SEEEEECTTSCEEEEECSEEEEECEE
T ss_pred hHHHHHHHHHHH-----HCCCEEEeCCEEEEEeC---CeEEEEecCCCceEEeeeEEEECCCC
Confidence 344455555554 56799999999999964 34555542 2567999999998764
No 171
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=74.95 E-value=1.8 Score=41.58 Aligned_cols=57 Identities=19% Similarity=0.239 Sum_probs=39.9
Q ss_pred HHHHHHHHhCCCCCCCCCC-ceEEcCCceEEEEecCCCcEEEEeCC---C--cEEEcCEEEEcCCcccc
Q psy7654 46 NVLKLLLKQMPGQTPIDLG-KKLLLNKEVTKINWEDANGVLVTCAD---G--SQYSADKVLITVSLGVF 108 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G-~~I~ln~~V~~I~~~~~~~v~v~~~~---G--~~~~ad~VIvtiP~~~l 108 (373)
.|.+.|.+.+.+ ..| .+|+++++|++|.. +++|.|++.+ | .++.+|.||.|.-....
T Consensus 108 ~l~~~L~~~~~~----~~g~~~v~~~~~v~~i~~--~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 108 ELQMILLAAVRE----RLGQQAVRTGLGVERIEE--RDGRVLIGARDGHGKPQALGADVLVGADGIHSA 170 (410)
T ss_dssp HHHHHHHHHHHH----HHCTTSEEESEEEEEEEE--ETTEEEEEEEETTSCEEEEEESEEEECCCTTCH
T ss_pred HHHHHHHHHHHh----hCCCcEEEECCEEEEEec--CCccEEEEecCCCCCceEEecCEEEECCCccch
Confidence 455555554431 123 37999999999987 4567777654 6 57899999999887643
No 172
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=74.47 E-value=3.5 Score=42.00 Aligned_cols=57 Identities=12% Similarity=0.152 Sum_probs=42.1
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE---EEEe-CCCc--EEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV---LVTC-ADGS--QYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v---~v~~-~~G~--~~~ad~VIvtiP~~ 106 (373)
..+++.|.+.+. +.|++|+.+++|++|..+.++++ .+.. .+|+ ++.|++||+|+-..
T Consensus 143 ~~l~~~L~~~~~-----~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 143 HALLHTLYQQNL-----KNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHH-----hCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 578888887775 45799999999999998214543 3332 4565 57899999998774
No 173
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=74.34 E-value=3.2 Score=37.49 Aligned_cols=44 Identities=25% Similarity=0.317 Sum_probs=33.4
Q ss_pred CCCceEEcCCceEEEEecCCCc---EEEEeCCCc--EEEcCEEEEcCCcc
Q psy7654 62 DLGKKLLLNKEVTKINWEDANG---VLVTCADGS--QYSADKVLITVSLG 106 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~---v~v~~~~G~--~~~ad~VIvtiP~~ 106 (373)
+.|.+++++++|++|.. ++++ +.+...+|+ ++.+|.||+++...
T Consensus 195 ~~gv~~~~~~~v~~i~~-~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 195 NEKIELITSASVDEVYG-DKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp CTTEEEECSCEEEEEEE-ETTEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred cCCeEEEeCcEEEEEEc-CCCcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 45689999999999987 5544 344444775 68899999998863
No 174
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=73.71 E-value=3.7 Score=42.56 Aligned_cols=56 Identities=13% Similarity=0.132 Sum_probs=41.8
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE-EEEeCCCcEEEcCEEEEcCCccc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV-LVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v-~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
.+.+.|.+.+.+ ..|.+| ++++|+.|.. ++++| .|.+.+|.++.||.||+|+-...
T Consensus 125 ~~~~~L~e~Le~----~~GV~I-~~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 125 LYRQAVRTALEN----QPNLMI-FQQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHT----CTTEEE-EECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHh----CCCCEE-EEEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 455666665541 136788 6789999998 66665 68888888899999999998754
No 175
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=73.34 E-value=2.5 Score=37.89 Aligned_cols=36 Identities=19% Similarity=0.177 Sum_probs=30.8
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhC
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~ 370 (373)
+.++||.+||.... +..+..|+..|..||..|.+.+
T Consensus 256 ~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l 291 (297)
T 3fbs_A 256 TARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSI 291 (297)
T ss_dssp SSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHH
Confidence 45789999998764 6789999999999999998765
No 176
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=73.32 E-value=4.2 Score=36.78 Aligned_cols=42 Identities=21% Similarity=0.314 Sum_probs=32.0
Q ss_pred CCceEEcCCceEEEEecCCCcEEEEeCC---Cc--EEEcCEEEEcCCc
Q psy7654 63 LGKKLLLNKEVTKINWEDANGVLVTCAD---GS--QYSADKVLITVSL 105 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~~v~v~~~~---G~--~~~ad~VIvtiP~ 105 (373)
.|.+++++++|++|.. ++....|.+.+ |+ ++.+|.||+++..
T Consensus 203 ~gv~~~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 203 PNVEFVLNSVVKEIKG-DKVVKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp TTEEEECSEEEEEEEE-SSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCcEEEeCCEEEEEec-cCceeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 4789999999999998 54433454433 65 6899999999875
No 177
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=72.65 E-value=3.8 Score=42.51 Aligned_cols=56 Identities=20% Similarity=0.191 Sum_probs=42.2
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE---EEE-eCCCc--EEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV---LVT-CADGS--QYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v---~v~-~~~G~--~~~ad~VIvtiP~~ 106 (373)
..|+.+|.+.+. +.|++|+.+++|++|.. +++++ .+. +.+|+ .+.|++||+|+--.
T Consensus 158 ~~l~~~L~~~a~-----~~gv~i~~~~~v~~L~~-~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 219 (660)
T 2bs2_A 158 HTMLFAVANECL-----KLGVSIQDRKEAIALIH-QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGY 219 (660)
T ss_dssp HHHHHHHHHHHH-----HHTCEEECSEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHH-----hCCCEEEECcEEEEEEe-cCCEEEEEEEEECCCCcEEEEEcCEEEEccCcc
Confidence 478888888775 56789999999999987 55543 333 25665 48999999998764
No 178
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=72.28 E-value=2.8 Score=41.81 Aligned_cols=55 Identities=11% Similarity=0.084 Sum_probs=37.6
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCc----EEEcCEEEEcCCc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGS----QYSADKVLITVSL 105 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~----~~~ad~VIvtiP~ 105 (373)
..+.+.+.+.+. ++|++|++|++|++|+. ++-.+.+...+|+ ++.+|.||.|+..
T Consensus 272 ~~~~~~~~~~L~-----~~GV~v~~~~~v~~v~~-~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 272 KKLSSYAQSHLE-----NTSIKVHLRTAVAKVEE-KQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp HHHHHHHHHHHH-----HTTCEEETTEEEEEECS-SEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred HHHHHHHHHHHH-----hcceeeecCceEEEEeC-CceEEEEEecCcccceeeeccCEEEEccCC
Confidence 455555566665 67899999999999964 2222334445653 5899999998753
No 179
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=71.79 E-value=2.9 Score=40.99 Aligned_cols=53 Identities=23% Similarity=0.303 Sum_probs=38.2
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCC--cEEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADG--SQYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G--~~~~ad~VIvtiP~~ 106 (373)
.+.+.+.+.+. +.|.+|+++++|++|+. +++.+...+| +++.+|.||+|+...
T Consensus 213 ~~~~~l~~~l~-----~~gv~i~~~~~v~~i~~---~~v~v~~~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 213 ELTAPVAESLK-----KLGIALHLGHSVEGYEN---GCLLANDGKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp HHHHHHHHHHH-----HHTCEEETTCEEEEEET---TEEEEECSSSCCCEECCSCEEECCCEE
T ss_pred HHHHHHHHHHH-----HCCCEEEECCEEEEEEe---CCEEEEECCCceEEEECCEEEECcCCC
Confidence 34444555454 45789999999999985 2366664456 578999999998763
No 180
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=71.20 E-value=3.5 Score=41.47 Aligned_cols=54 Identities=15% Similarity=0.115 Sum_probs=41.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCC---C--cEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCAD---G--SQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~---G--~~~~ad~VIvtiP~~~ 107 (373)
..|-+.|.+.+.+ . |+++++|++|+. ++++|.|++.+ | .+++||+||.|.-...
T Consensus 138 ~~l~~~L~~~a~~-------~-v~~~~~v~~~~~-~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 138 HWLAPLLAEAVGE-------R-LRTRSRLDSFEQ-RDDHVRATITDLRTGATRAVHARYLVACDGASS 196 (549)
T ss_dssp HHHHHHHHHHHGG-------G-EECSEEEEEEEE-CSSCEEEEEEETTTCCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHH-------h-cccCcEEEEEEE-eCCEEEEEEEECCCCCEEEEEeCEEEECCCCCc
Confidence 3566667777652 2 999999999998 77888776654 6 4689999999988764
No 181
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=71.18 E-value=3.3 Score=37.73 Aligned_cols=44 Identities=5% Similarity=-0.026 Sum_probs=32.3
Q ss_pred CCCceEEcCCceEEEEecCCCcEEEEeCC-----CcEEEcCEEEEcCCcc
Q psy7654 62 DLGKKLLLNKEVTKINWEDANGVLVTCAD-----GSQYSADKVLITVSLG 106 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~v~v~~~~-----G~~~~ad~VIvtiP~~ 106 (373)
+.|.+++++++|++|.. +++.+.|+..+ +.++.+|.||+++...
T Consensus 201 ~~gv~~~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 201 ASKVNVLTPFVPAELIG-EDKIEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp HSSCEEETTEEEEEEEC-SSSCCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred cCCeEEEeCceeeEEec-CCceEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 35689999999999987 55444444332 3568999999998753
No 182
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=71.02 E-value=5.7 Score=35.97 Aligned_cols=42 Identities=21% Similarity=0.193 Sum_probs=31.6
Q ss_pred CCceEEcCCceEEEEecCCCcE-EEEeC---CCc--EEEcCEEEEcCCc
Q psy7654 63 LGKKLLLNKEVTKINWEDANGV-LVTCA---DGS--QYSADKVLITVSL 105 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~~v-~v~~~---~G~--~~~ad~VIvtiP~ 105 (373)
.|.+|+++++|++|.. +++++ .|... +|+ ++.+|.||+++..
T Consensus 192 ~gv~v~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 192 DKIEFLTPYVVEEIKG-DASGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp TTEEEETTEEEEEEEE-ETTEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred CCeEEEeCCEEEEEEC-CCCcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 4689999999999987 54543 34333 565 6899999999865
No 183
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=69.78 E-value=6.1 Score=36.75 Aligned_cols=43 Identities=26% Similarity=0.332 Sum_probs=32.4
Q ss_pred CCCceEEcCCceEEEEecCCCc---EEEEeCCC--cEEEcCEEEEcCCc
Q psy7654 62 DLGKKLLLNKEVTKINWEDANG---VLVTCADG--SQYSADKVLITVSL 105 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~---v~v~~~~G--~~~~ad~VIvtiP~ 105 (373)
+.|.+|+++++|++|.. .+++ +.+...+| .++.+|.||+++..
T Consensus 214 ~~gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~ 261 (360)
T 3ab1_A 214 NGTIDVYLETEVASIEE-SNGVLTRVHLRSSDGSKWTVEADRLLILIGF 261 (360)
T ss_dssp HTSEEEESSEEEEEEEE-ETTEEEEEEEEETTCCEEEEECSEEEECCCB
T ss_pred cCceEEEcCcCHHHhcc-CCCceEEEEEEecCCCeEEEeCCEEEECCCC
Confidence 34588999999999998 5554 33433466 57899999999875
No 184
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=68.49 E-value=4.1 Score=39.49 Aligned_cols=42 Identities=17% Similarity=0.209 Sum_probs=32.7
Q ss_pred CCCceEEcCCceEEEEecCCCcEEEEeCCC--cEEEcCEEEEcCCcc
Q psy7654 62 DLGKKLLLNKEVTKINWEDANGVLVTCADG--SQYSADKVLITVSLG 106 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G--~~~~ad~VIvtiP~~ 106 (373)
++|.++++|+.|++|+ ++++.+...+| +++.+|.||++++..
T Consensus 212 ~~GV~~~~~~~v~~v~---~~~~~~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 212 ERNIDWIANVAVKAIE---PDKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HTTCEEECSCEEEEEC---SSEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred hCCeEEEeCceEEEEe---CCceEEEeeCCCceEeecceEEEeccCC
Confidence 4569999999999995 45677766554 468999999998753
No 185
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=68.37 E-value=5.4 Score=41.27 Aligned_cols=56 Identities=13% Similarity=0.142 Sum_probs=40.5
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEE-EEeCCCcEEEcCEEEEcCCccc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVL-VTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~-v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
.+.+.|.+.+.+ ..|.+| ++..|+.|.. ++++|. |.+.+|.++.||+||+|+-...
T Consensus 118 ~l~~~L~~~l~~----~~GV~I-~~~~V~~L~~-d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 118 QYSLYMRRIVEH----EPNIDL-LQDTVIGVSA-NSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHHT----CTTEEE-EECCEEEEEE-ETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHHh----CCCCEE-EeeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 445555555531 125777 4669999988 677776 8888888999999999988653
No 186
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=68.11 E-value=4 Score=37.19 Aligned_cols=37 Identities=14% Similarity=0.089 Sum_probs=29.3
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhC
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~ 370 (373)
+.|+||-|||-+.. .+..+.-|+..|..||..|.+.|
T Consensus 269 s~pgIyA~GDv~~~-~~~~~~~A~~~G~~AA~~i~~~L 305 (312)
T 4gcm_A 269 SVPGIFAAGDVRDK-GLRQIVTATGDGSIAAQSAAEYI 305 (312)
T ss_dssp SSTTEEECSTTBSC-SCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeecCCC-cchHHHHHHHHHHHHHHHHHHHH
Confidence 44689999997653 23468889999999999997754
No 187
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=67.47 E-value=7.4 Score=37.73 Aligned_cols=53 Identities=21% Similarity=0.314 Sum_probs=37.2
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
.+.+.+.+.+. +. .++++++.|.+|.. .+ ++.....+|+++.+|.||+|+...
T Consensus 191 ~~~~~l~~~l~-----~~-v~i~~~~~v~~i~~-~~-~v~~v~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 191 EVTDILEEKLK-----KH-VNLRLQEITMKIEG-EE-RVEKVVTDAGEYKAELVILATGIK 243 (449)
T ss_dssp HHHHHHHHHHT-----TT-SEEEESCCEEEEEC-SS-SCCEEEETTEEEECSEEEECSCEE
T ss_pred HHHHHHHHHHH-----hC-cEEEeCCeEEEEec-cC-cEEEEEeCCCEEECCEEEEeeCCc
Confidence 34455555554 34 78999999999987 44 443333466789999999998753
No 188
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=67.20 E-value=6.2 Score=35.97 Aligned_cols=42 Identities=29% Similarity=0.302 Sum_probs=31.0
Q ss_pred CCceEEcCCceEEEEecCCCc---EEEEe-CCCc--EEEcCEEEEcCCc
Q psy7654 63 LGKKLLLNKEVTKINWEDANG---VLVTC-ADGS--QYSADKVLITVSL 105 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~~---v~v~~-~~G~--~~~ad~VIvtiP~ 105 (373)
.|.+|+++++|++|.. ++++ +.+.. .+|+ ++.+|.||+++..
T Consensus 203 ~gv~i~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 203 RNIPYIMNAQVTEIVG-DGKKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp TTCCEECSEEEEEEEE-SSSSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred CCcEEEcCCeEEEEec-CCceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 4689999999999998 5542 33432 2564 5899999999865
No 189
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=66.66 E-value=8.7 Score=35.05 Aligned_cols=42 Identities=21% Similarity=0.321 Sum_probs=31.0
Q ss_pred CCceEEcCCceEEEEecCCC--cEEEEe-CCCc--EEEcCEEEEcCCc
Q psy7654 63 LGKKLLLNKEVTKINWEDAN--GVLVTC-ADGS--QYSADKVLITVSL 105 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~--~v~v~~-~~G~--~~~ad~VIvtiP~ 105 (373)
.|.+|+++++|++|.. ++. ++.+.. .+|+ ++.+|.||+++..
T Consensus 201 ~gv~i~~~~~v~~i~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 201 PKMKFIWDTAVEEIQG-ADSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp TTEEEECSEEEEEEEE-SSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred CCceEecCCceEEEcc-CCcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 4689999999999987 443 233432 2564 6899999999865
No 190
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=65.46 E-value=4 Score=42.00 Aligned_cols=57 Identities=19% Similarity=0.134 Sum_probs=41.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCc--eEEcCCceEEEEecCCC----cEEEEeC------CC--cEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGK--KLLLNKEVTKINWEDAN----GVLVTCA------DG--SQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~--~I~ln~~V~~I~~~~~~----~v~v~~~------~G--~~~~ad~VIvtiP~~~ 107 (373)
..|.+.|.+.+. ++|+ +|+++++|++|+. +++ +|.|+.. +| .++++|+||.|.-...
T Consensus 141 ~~l~~~L~~~a~-----~~g~~v~v~~~~~v~~l~~-~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 141 ARVHDHYLERMR-----NSPSRLEPHYARRVLDVKV-DHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp HHHHHHHHHHHH-----HSTTCCCCBCSEEEEEEEE-CTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHH-----hCCCCcEEecCCEEEEEEE-CCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 456666666664 4555 8999999999998 442 5777643 45 4689999999987764
No 191
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=64.80 E-value=8.3 Score=37.33 Aligned_cols=40 Identities=28% Similarity=0.347 Sum_probs=32.7
Q ss_pred CceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 64 GKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 64 G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
|.+++++++|+.|.. .+. .|++.+|+++.+|+||+|+-..
T Consensus 74 gv~~~~~~~v~~i~~-~~~--~v~~~~g~~~~~d~lviAtG~~ 113 (431)
T 1q1r_A 74 NIQLLGGTQVTAINR-DRQ--QVILSDGRALDYDRLVLATGGR 113 (431)
T ss_dssp TEEEECSCCEEEEET-TTT--EEEETTSCEEECSEEEECCCEE
T ss_pred CCEEEeCCEEEEEEC-CCC--EEEECCCCEEECCEEEEcCCCC
Confidence 578999999999987 444 4556678889999999999763
No 192
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=64.65 E-value=7.9 Score=34.81 Aligned_cols=52 Identities=13% Similarity=0.084 Sum_probs=39.6
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCC--CcEEEEe-CCCcEEEcCEEEEcCCc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDA--NGVLVTC-ADGSQYSADKVLITVSL 105 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~--~~v~v~~-~~G~~~~ad~VIvtiP~ 105 (373)
..+.+.+.+.+. +.|.+++++ +|++| . ++ +.+.+.. .++ ++.+|+||+|+-.
T Consensus 62 ~~~~~~~~~~~~-----~~~v~~~~~-~v~~i-~-~~~~~~~~v~~~~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 62 ISFMAPWSEQCM-----RFGLKHEMV-GVEQI-L-KNSDGSFTIKLEGGK-TELAKAVIVCTGS 116 (315)
T ss_dssp HHHHHHHHHHHT-----TTCCEEECC-CEEEE-E-ECTTSCEEEEETTSC-EEEEEEEEECCCE
T ss_pred HHHHHHHHHHHH-----HcCcEEEEE-EEEEE-e-cCCCCcEEEEEecCC-EEEeCEEEEeeCC
Confidence 577777777776 567899998 99999 6 55 6788522 234 8999999999876
No 193
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=64.62 E-value=8.5 Score=37.81 Aligned_cols=41 Identities=24% Similarity=0.370 Sum_probs=34.3
Q ss_pred CceEEcCCceEEEEecCCCcEEEEe-CCCc--EEEcCEEEEcCCc
Q psy7654 64 GKKLLLNKEVTKINWEDANGVLVTC-ADGS--QYSADKVLITVSL 105 (373)
Q Consensus 64 G~~I~ln~~V~~I~~~~~~~v~v~~-~~G~--~~~ad~VIvtiP~ 105 (373)
|.+++++++|+.|.. .++.|.+.. .+|+ ++.+|+||+|+-.
T Consensus 107 gv~~~~~~~v~~i~~-~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (480)
T 3cgb_A 107 GIDAKVRHEVTKVDT-EKKIVYAEHTKTKDVFEFSYDRLLIATGV 150 (480)
T ss_dssp CCEEESSEEEEEEET-TTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEEC-CCCEEEEEEcCCCceEEEEcCEEEECCCC
Confidence 578999999999998 677788876 4566 6899999999875
No 194
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=63.92 E-value=6.4 Score=39.10 Aligned_cols=41 Identities=17% Similarity=0.125 Sum_probs=31.5
Q ss_pred ceEEcCCceEEEEecCC-------CcEEEEeCCC-----cEEEcCEEEEcCCc
Q psy7654 65 KKLLLNKEVTKINWEDA-------NGVLVTCADG-----SQYSADKVLITVSL 105 (373)
Q Consensus 65 ~~I~ln~~V~~I~~~~~-------~~v~v~~~~G-----~~~~ad~VIvtiP~ 105 (373)
..|++|++|++|++... +.|.|++.++ .++.|++||+++..
T Consensus 160 ~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 160 DVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp GGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred CceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 57999999999987432 2478877543 35789999999984
No 195
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=63.83 E-value=9.7 Score=36.47 Aligned_cols=41 Identities=15% Similarity=0.188 Sum_probs=33.7
Q ss_pred CCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 62 DLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
+.|.+++++++|++|.. ... .|++.+|+++.+|++|+|+-.
T Consensus 71 ~~~v~~~~~~~v~~i~~-~~~--~v~~~~g~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 71 APEVEWLLGVTAQSFDP-QAH--TVALSDGRTLPYGTLVLATGA 111 (408)
T ss_dssp SCSCEEEETCCEEEEET-TTT--EEEETTSCEEECSEEEECCCE
T ss_pred HCCCEEEcCCEEEEEEC-CCC--EEEECCCCEEECCEEEECCCC
Confidence 56789999999999987 443 456677888999999999976
No 196
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=62.81 E-value=3.4 Score=40.81 Aligned_cols=55 Identities=16% Similarity=0.184 Sum_probs=39.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcE---EEEeCCCcEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGV---LVTCADGSQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v---~v~~~~G~~~~ad~VIvtiP~~~ 107 (373)
..|.+.|.+.+. +.|.+|+.+++| +|.. +++++ .+.+.+| ++.+|.||+|+-...
T Consensus 119 ~~l~~~L~~~~~-----~~gv~i~~~~~v-~l~~-~~~~v~Gv~v~~~~g-~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 119 REIFNFLLKLAR-----EEGIPIIEDRLV-EIRV-KDGKVTGFVTEKRGL-VEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHH-----HTTCCEECCCEE-EEEE-ETTEEEEEEETTTEE-ECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHH-----hCCCEEEECcEE-EEEE-eCCEEEEEEEEeCCC-eEEeeeEEECCCCCc
Confidence 467777777664 457899999999 9987 56654 2323334 577999999987654
No 197
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=62.37 E-value=10 Score=36.29 Aligned_cols=41 Identities=24% Similarity=0.366 Sum_probs=33.4
Q ss_pred CCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 63 LGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
.|.+++++++|++|.. ... .|++.+|+++.+|++|+|+-..
T Consensus 70 ~~i~~~~~~~v~~id~-~~~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 70 ARIDMLTGPEVTALDV-QTR--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp TTCEEEESCCEEEEET-TTT--EEEETTSCEEECSEEEECCCEE
T ss_pred CCCEEEeCCEEEEEEC-CCC--EEEECCCCEEECCEEEEccCCc
Confidence 4589999999999987 444 5666788899999999998753
No 198
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=62.06 E-value=6.9 Score=38.56 Aligned_cols=42 Identities=24% Similarity=0.362 Sum_probs=33.1
Q ss_pred CCceEEcCCceEEEEecCCCcEEEE-eCCCcEEEcCEEEEcCCc
Q psy7654 63 LGKKLLLNKEVTKINWEDANGVLVT-CADGSQYSADKVLITVSL 105 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~~v~v~-~~~G~~~~ad~VIvtiP~ 105 (373)
.|.+++++++|+.|.. .++.|.+. ..++.++.+|+||+|+-.
T Consensus 105 ~gv~v~~~~~v~~i~~-~~~~v~v~~~g~~~~~~~d~lviAtG~ 147 (490)
T 2bc0_A 105 LGAKVYMESPVQSIDY-DAKTVTALVDGKNHVETYDKLIFATGS 147 (490)
T ss_dssp TTCEEETTCCEEEEET-TTTEEEEEETTEEEEEECSEEEECCCE
T ss_pred CCCEEEeCCEEEEEEC-CCCEEEEEeCCcEEEEECCEEEECCCC
Confidence 3578999999999997 67777776 322457899999999974
No 199
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=62.03 E-value=5.1 Score=39.03 Aligned_cols=39 Identities=26% Similarity=0.225 Sum_probs=31.9
Q ss_pred CCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 62 DLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
+.|.+++++++|++++. + .|+..+|+++.+|.||+++..
T Consensus 200 ~~gV~i~~~~~v~~~~~---~--~v~~~~g~~~~~D~vl~a~G~ 238 (437)
T 4eqs_A 200 KREIPYRLNEEINAING---N--EITFKSGKVEHYDMIIEGVGT 238 (437)
T ss_dssp HTTCCEEESCCEEEEET---T--EEEETTSCEEECSEEEECCCE
T ss_pred ccceEEEeccEEEEecC---C--eeeecCCeEEeeeeEEEEece
Confidence 45689999999999864 2 366678899999999999864
No 200
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=61.63 E-value=11 Score=34.25 Aligned_cols=44 Identities=14% Similarity=0.179 Sum_probs=32.4
Q ss_pred CCCceEEcCCceEEEEecCCC--c---EEEEeC-CC--cEEEcCEEEEcCCcc
Q psy7654 62 DLGKKLLLNKEVTKINWEDAN--G---VLVTCA-DG--SQYSADKVLITVSLG 106 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~--~---v~v~~~-~G--~~~~ad~VIvtiP~~ 106 (373)
+.|.+|+++++|++|.. +++ + +.+... +| .++.+|.||+++...
T Consensus 207 ~~gv~i~~~~~v~~i~~-~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 207 NPKIDVIWNSSVVEAYG-DGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp CTTEEEECSEEEEEEEE-SSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred CCCeeEecCCceEEEeC-CCCccceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 45689999999999998 553 4 444431 45 468999999998763
No 201
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=61.56 E-value=6.3 Score=38.99 Aligned_cols=41 Identities=32% Similarity=0.423 Sum_probs=33.2
Q ss_pred CCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 62 DLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
+.|.+++++++|++|.. ... .|++.+|+++.+|++|+|+-.
T Consensus 102 ~~gv~~~~g~~v~~id~-~~~--~V~~~~g~~i~yd~lviATGs 142 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDV-RDN--MVKLNDGSQITYEKCLIATGG 142 (493)
T ss_dssp TCEEEEEETCCEEEEEG-GGT--EEEETTSCEEEEEEEEECCCE
T ss_pred cCCeEEEcCCEEEEEEC-CCC--EEEECCCCEEECCEEEECCCC
Confidence 35688999999999987 444 466678888999999999864
No 202
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=61.06 E-value=11 Score=34.06 Aligned_cols=42 Identities=17% Similarity=0.326 Sum_probs=31.1
Q ss_pred CCceEEcCCceEEEEecCCCcE-EEEeC---CCc--EEEcCEEEEcCCc
Q psy7654 63 LGKKLLLNKEVTKINWEDANGV-LVTCA---DGS--QYSADKVLITVSL 105 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~~v-~v~~~---~G~--~~~ad~VIvtiP~ 105 (373)
.|.+|+++++|++|.. +++++ .|... +|+ ++.+|.||+++..
T Consensus 193 ~gv~v~~~~~v~~i~~-~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKG-DGSKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp TTEEEESSEEEEEEEE-SSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred CCeEEecCCceEEEEc-CCCcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 4689999999999997 55544 33332 353 6789999999864
No 203
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=59.78 E-value=9.5 Score=36.31 Aligned_cols=38 Identities=18% Similarity=0.013 Sum_probs=32.3
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhC
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~ 370 (373)
+.++||.+||.++...+....-|...|..||..|...+
T Consensus 298 ~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp SCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 45789999999875445678899999999999999887
No 204
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=58.81 E-value=5 Score=38.86 Aligned_cols=52 Identities=19% Similarity=0.169 Sum_probs=35.5
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEe--CC-----CcEEEcCEEEEcCCc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTC--AD-----GSQYSADKVLITVSL 105 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~--~~-----G~~~~ad~VIvtiP~ 105 (373)
.+.+.+.+.+. +.|.+++++++|++|+. +++.+.. .+ ++++.+|.||++++.
T Consensus 209 ~~~~~~~~~l~-----~~gI~~~~~~~v~~v~~---~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 209 DSKGILTKGLK-----EEGIEAYTNCKVTKVED---NKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp THHHHHHHHHH-----HTTCEEECSEEEEEEET---TEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHHHH-----HCCCEEEcCCEEEEEEC---CeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 34444444444 45789999999999974 3555543 33 456899999998764
No 205
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=58.74 E-value=6.7 Score=37.12 Aligned_cols=49 Identities=18% Similarity=0.348 Sum_probs=35.7
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
.+.+.+.+.+. +.|.+|+++++|++|+. ++ |.+.+|+ +.+|.||+|+..
T Consensus 184 ~~~~~l~~~l~-----~~gV~i~~~~~v~~i~~---~~--v~~~~g~-i~~D~vi~a~G~ 232 (367)
T 1xhc_A 184 ELSNMIKDMLE-----ETGVKFFLNSELLEANE---EG--VLTNSGF-IEGKVKICAIGI 232 (367)
T ss_dssp HHHHHHHHHHH-----HTTEEEECSCCEEEECS---SE--EEETTEE-EECSCEEEECCE
T ss_pred HHHHHHHHHHH-----HCCCEEEcCCEEEEEEe---eE--EEECCCE-EEcCEEEECcCC
Confidence 34444555554 45789999999999973 23 5556776 999999999875
No 206
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=58.19 E-value=11 Score=36.44 Aligned_cols=41 Identities=22% Similarity=0.294 Sum_probs=31.7
Q ss_pred CCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 62 DLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
+.|.+++.+ +|++|+. +++. |++++|+++.+|++|+|+-..
T Consensus 68 ~~gv~~i~~-~v~~Id~-~~~~--V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 68 KFNIEFINE-KAESIDP-DANT--VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp GGTEEEECS-CEEEEET-TTTE--EEETTCCEEECSEEEECCCCE
T ss_pred HCCcEEEEe-EEEEEEC-CCCE--EEECCCCEEECCEEEEeCCCC
Confidence 346777665 7999987 4544 667888899999999999864
No 207
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=56.80 E-value=11 Score=37.72 Aligned_cols=41 Identities=32% Similarity=0.328 Sum_probs=33.1
Q ss_pred CceEEcCCceEEEEecCCCcEEEEe-CCCc--EEEcCEEEEcCCc
Q psy7654 64 GKKLLLNKEVTKINWEDANGVLVTC-ADGS--QYSADKVLITVSL 105 (373)
Q Consensus 64 G~~I~ln~~V~~I~~~~~~~v~v~~-~~G~--~~~ad~VIvtiP~ 105 (373)
|.+++++++|++|.. .++.+.+.. .+|+ ++.+|+||+|+-.
T Consensus 72 ~i~~~~~~~V~~id~-~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 72 NVEVRVKHEVVAIDR-AAKLVTVRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp CCEEETTEEEEEEET-TTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEEC-CCCEEEEEecCCCCeEEEECCEEEECCCC
Confidence 478999999999998 777787765 2343 6899999999865
No 208
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=56.68 E-value=19 Score=36.15 Aligned_cols=41 Identities=15% Similarity=0.212 Sum_probs=33.8
Q ss_pred CceEEcCCceEEEEecCCCcEEEEe-CCCc--EEEcCEEEEcCCc
Q psy7654 64 GKKLLLNKEVTKINWEDANGVLVTC-ADGS--QYSADKVLITVSL 105 (373)
Q Consensus 64 G~~I~ln~~V~~I~~~~~~~v~v~~-~~G~--~~~ad~VIvtiP~ 105 (373)
|.+++++++|++|.. .++.+.+.. .+|+ ++.+|+||+|+-.
T Consensus 107 gi~v~~~~~V~~id~-~~~~v~v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 107 NLDIRVLSEVVKINK-EEKTITIKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp TCEEECSEEEEEEET-TTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEEC-CCCEEEEeecCCCCEEEEeCCEEEECCCC
Confidence 478999999999998 777888775 3565 6799999999875
No 209
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=56.66 E-value=4.3 Score=42.09 Aligned_cols=42 Identities=17% Similarity=0.178 Sum_probs=31.7
Q ss_pred CCCceEEcCCceEEEEecCCCcEEEEe---CCCcEEEcCEEEEcCCcc
Q psy7654 62 DLGKKLLLNKEVTKINWEDANGVLVTC---ADGSQYSADKVLITVSLG 106 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~v~v~~---~~G~~~~ad~VIvtiP~~ 106 (373)
+.|++|+++++|++|.. + ++.+.. .+++++.+|.||+|+...
T Consensus 579 ~~GV~i~~~~~V~~i~~-~--~~~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 579 ENGVARVTDHAVVAVGA-G--GVTVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp HTTCEEEESEEEEEEET-T--EEEEEETTTCCEEEEECSEEEEESCEE
T ss_pred HCCCEEEcCcEEEEEEC-C--eEEEEEccCCeEEEEECCEEEECCCCC
Confidence 45789999999999975 3 344442 245678999999998764
No 210
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=56.60 E-value=13 Score=36.19 Aligned_cols=42 Identities=17% Similarity=0.245 Sum_probs=33.1
Q ss_pred CCceEEcCCceEEEEecCCCcEEEEe-CCCc--EEEcCEEEEcCCc
Q psy7654 63 LGKKLLLNKEVTKINWEDANGVLVTC-ADGS--QYSADKVLITVSL 105 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~~v~v~~-~~G~--~~~ad~VIvtiP~ 105 (373)
.|.+++++++|++|.. .++.+.+.. .+|+ ++.+|++|+|+-.
T Consensus 79 ~gi~~~~~~~V~~id~-~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 79 KDVEALVETRAHAIDR-AAHTVEIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp --CEEECSEEEEEEET-TTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred cCcEEEECCEEEEEEC-CCCEEEEeecCCCCEEEEECCEEEEeCCC
Confidence 5688999999999998 777787775 3454 7899999999865
No 211
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=56.06 E-value=15 Score=35.55 Aligned_cols=41 Identities=27% Similarity=0.328 Sum_probs=33.0
Q ss_pred CceEEcCCceEEEEecCCCcEEEEe-CCCc--EEEcCEEEEcCCc
Q psy7654 64 GKKLLLNKEVTKINWEDANGVLVTC-ADGS--QYSADKVLITVSL 105 (373)
Q Consensus 64 G~~I~ln~~V~~I~~~~~~~v~v~~-~~G~--~~~ad~VIvtiP~ 105 (373)
|.++++++.|++|.. .++.|.+.. .+|+ ++.+|++|+|+-.
T Consensus 70 gv~~~~~~~v~~i~~-~~~~v~~~~~~~g~~~~~~~d~lviAtG~ 113 (447)
T 1nhp_A 70 GVNVFSNTEITAIQP-KEHQVTVKDLVSGEERVENYDKLIISPGA 113 (447)
T ss_dssp TCEEEETEEEEEEET-TTTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCEEEECCEEEEEeC-CCCEEEEEecCCCceEEEeCCEEEEcCCC
Confidence 478999999999988 677777765 4454 3899999999864
No 212
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=55.84 E-value=4.8 Score=40.53 Aligned_cols=58 Identities=12% Similarity=0.093 Sum_probs=36.5
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCC------cEE-EEe---CCCc--EEEcCEEEEcCCccc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDAN------GVL-VTC---ADGS--QYSADKVLITVSLGV 107 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~------~v~-v~~---~~G~--~~~ad~VIvtiP~~~ 107 (373)
.|.++|.+.+.+ ..|++|+.+++|++|...+++ ++. |.. .+|+ ++.|+.||+|+-...
T Consensus 139 ~l~~~L~~~~~~----~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 139 EVETTLVSKALN----HPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ---CCCHHHHHH----CTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHc----CCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 445555555431 146899999999999872223 432 333 3564 689999999987653
No 213
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=55.76 E-value=8.2 Score=37.90 Aligned_cols=36 Identities=19% Similarity=0.148 Sum_probs=30.2
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhC
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~ 370 (373)
+.++||.+||...+ +..+.-|+..|..||..|...|
T Consensus 408 s~~~VfA~GD~~~g--~~~v~~A~~~G~~aA~~i~~~L 443 (456)
T 2vdc_G 408 NMDGVFAAGDIVRG--ASLVVWAIRDGRDAAEGIHAYA 443 (456)
T ss_dssp SSTTEEECGGGGSS--CCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeccccCC--chHHHHHHHHHHHHHHHHHHHh
Confidence 44689999998764 5689999999999999998754
No 214
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=55.18 E-value=8.6 Score=37.37 Aligned_cols=37 Identities=24% Similarity=0.312 Sum_probs=29.2
Q ss_pred ceEEEeccccCCCC-c-c-hhhHHHHHHHHHHHHHHhhCC
Q psy7654 335 QVLLFAGEASNEHQ-Y-G-TVNGAVETGWREADRILKSDP 371 (373)
Q Consensus 335 ~~i~fAGd~~s~~~-~-g-~veGA~~SG~~AA~~i~~~~~ 371 (373)
|+||||||-+...+ . | .+.-|+-+|..|++.+.+..+
T Consensus 405 ~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~~ 444 (447)
T 2i0z_A 405 NGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENAK 444 (447)
T ss_dssp BTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 58999999988543 2 2 567799999999999887654
No 215
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=55.13 E-value=10 Score=36.83 Aligned_cols=42 Identities=26% Similarity=0.353 Sum_probs=33.7
Q ss_pred CCceEEcCCceEEEEecCCCcEEEEe-CCCcEEEcCEEEEcCCc
Q psy7654 63 LGKKLLLNKEVTKINWEDANGVLVTC-ADGSQYSADKVLITVSL 105 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~~v~v~~-~~G~~~~ad~VIvtiP~ 105 (373)
.|.+++++++|++|.. .++.|.+.. .++.++.+|++|+|+-.
T Consensus 71 ~gi~~~~~~~V~~id~-~~~~v~v~~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 71 QKIQLLLNREVVAMDV-ENQLIAWTRKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp TTEEEECSCEEEEEET-TTTEEEEEETTEEEEEECSEEEECCCC
T ss_pred CCCEEEECCEEEEEEC-CCCEEEEEecCceEEEEcCEEEECCCc
Confidence 4578999999999998 777777752 24567899999999865
No 216
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=55.03 E-value=9.4 Score=35.09 Aligned_cols=37 Identities=16% Similarity=0.092 Sum_probs=29.6
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhC
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~ 370 (373)
+.++||.+||..... +....-|+.+|..||..|.+.|
T Consensus 279 ~~~~iya~GD~~~~~-~~~~~~A~~~g~~aA~~i~~~l 315 (335)
T 2a87_A 279 SLPGVFAAGDLVDRT-YRQAVTAAGSGCAAAIDAERWL 315 (335)
T ss_dssp SSTTEEECGGGTCCS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeeecCCcc-HHHHHHHHHhHHHHHHHHHHHh
Confidence 457899999987642 3568889999999999987654
No 217
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.92 E-value=12 Score=35.33 Aligned_cols=38 Identities=16% Similarity=0.285 Sum_probs=30.2
Q ss_pred CceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 64 GKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 64 G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
|.+++++++|+.|.. .. ..|+ .+|+++.+|++|+|+-.
T Consensus 74 ~v~~~~g~~v~~id~-~~--~~V~-~~g~~~~~d~lViATGs 111 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDR-GR--KVVI-TEKGEVPYDTLVLATGA 111 (367)
T ss_dssp TEEEECSCCEEEEET-TT--TEEE-ESSCEEECSEEEECCCE
T ss_pred CcEEEECCEEEEEEC-CC--CEEE-ECCcEEECCEEEECCCC
Confidence 478999999999987 43 3344 46778999999999875
No 218
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=53.02 E-value=11 Score=34.06 Aligned_cols=54 Identities=9% Similarity=0.278 Sum_probs=37.4
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
..|.+.+.+.+. ..+..+.. ..|..+.. ..+...+.+.++.++.+|+||+|+-.
T Consensus 66 ~~l~~~~~~~~~-----~~~~~~~~-~~v~~~~~-~~~~~~~~~~~~~~~~~~~liiATG~ 119 (314)
T 4a5l_A 66 NELMMNMRTQSE-----KYGTTIIT-ETIDHVDF-STQPFKLFTEEGKEVLTKSVIIATGA 119 (314)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEC-CCEEEEEC-SSSSEEEEETTCCEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHh-----hcCcEEEE-eEEEEeec-CCCceEEEECCCeEEEEeEEEEcccc
Confidence 456666655543 33455554 45777776 66667777788889999999999975
No 219
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=50.34 E-value=16 Score=35.29 Aligned_cols=41 Identities=20% Similarity=0.253 Sum_probs=31.3
Q ss_pred CCCceEEcCCceEEEEecCCCcEEEEeCCC-cEEEcCEEEEcCCcc
Q psy7654 62 DLGKKLLLNKEVTKINWEDANGVLVTCADG-SQYSADKVLITVSLG 106 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G-~~~~ad~VIvtiP~~ 106 (373)
+.|.+++.++.+. + +++.+.|.+.+| +++.+|+||+|+-..
T Consensus 103 ~~gv~~~~g~~~~-i---d~~~v~V~~~~G~~~i~~d~lViATGs~ 144 (455)
T 1ebd_A 103 GNKVEIVKGEAYF-V---DANTVRVVNGDSAQTYTFKNAIIATGSR 144 (455)
T ss_dssp TTTCEEEESEEEE-E---ETTEEEEEETTEEEEEECSEEEECCCEE
T ss_pred hCCCEEEEEEEEE-c---cCCeEEEEeCCCcEEEEeCEEEEecCCC
Confidence 4468899998654 3 356788888777 678999999999753
No 220
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=49.90 E-value=8.3 Score=35.01 Aligned_cols=38 Identities=18% Similarity=0.166 Sum_probs=29.0
Q ss_pred CCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhC
Q psy7654 332 QGKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 332 ~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~ 370 (373)
++.|+||-|||-+... +..+--|+.+|..||..|.+.|
T Consensus 262 Ts~p~IyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L 299 (304)
T 4fk1_A 262 TSEKNIYLAGETTTQG-PSSLIIAASQGNKAAIAINSDI 299 (304)
T ss_dssp CSSTTEEECSHHHHTS-CCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeccCCCc-chHHHHHHHHHHHHHHHHHHHH
Confidence 3457899999987532 3346678899999999998765
No 221
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=49.52 E-value=16 Score=35.25 Aligned_cols=41 Identities=22% Similarity=0.325 Sum_probs=31.7
Q ss_pred CCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 62 DLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
..|.+++ ..+|++|.. .++ .|++.+|+++.+|+||+|+-..
T Consensus 71 ~~gv~~~-~~~v~~id~-~~~--~V~~~~g~~i~~d~lviAtG~~ 111 (437)
T 3sx6_A 71 RKGIHFI-AQSAEQIDA-EAQ--NITLADGNTVHYDYLMIATGPK 111 (437)
T ss_dssp TTTCEEE-CSCEEEEET-TTT--EEEETTSCEEECSEEEECCCCE
T ss_pred HCCCEEE-EeEEEEEEc-CCC--EEEECCCCEEECCEEEECCCCC
Confidence 3467886 469999987 444 5667788889999999998764
No 222
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=49.37 E-value=25 Score=31.56 Aligned_cols=38 Identities=13% Similarity=-0.025 Sum_probs=28.9
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhCC
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSDP 371 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~~ 371 (373)
+.|+||-|||-+...+ ..+.-|+.+|..||..+.+.|.
T Consensus 275 s~pgIyA~GDv~~~~~-~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 275 SVDGVFACGDVCDRVY-RQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp SSTTEEECSTTTCSSC-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeccCCcc-hHHHHHHHHHHHHHHHHHHHHh
Confidence 4468999999876432 2466788999999999988763
No 223
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=49.26 E-value=18 Score=34.52 Aligned_cols=40 Identities=23% Similarity=0.231 Sum_probs=32.3
Q ss_pred CCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 63 LGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
.|.+++++++|++|.. ... .|.+.+|+++.+|++|+|+-.
T Consensus 78 ~~i~~~~~~~v~~id~-~~~--~v~~~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 78 KAVEMKLGAEVVSLDP-AAH--TVKLGDGSAIEYGKLIWATGG 117 (415)
T ss_dssp TTEEEEETCCEEEEET-TTT--EEEETTSCEEEEEEEEECCCE
T ss_pred CCcEEEeCCEEEEEEC-CCC--EEEECCCCEEEeeEEEEccCC
Confidence 3478999999999987 443 466678889999999999864
No 224
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=48.71 E-value=12 Score=36.07 Aligned_cols=35 Identities=23% Similarity=0.209 Sum_probs=27.5
Q ss_pred CceEEEeccccCCCC-c-c-hhhHHHHHHHHHHHHHHh
Q psy7654 334 KQVLLFAGEASNEHQ-Y-G-TVNGAVETGWREADRILK 368 (373)
Q Consensus 334 ~~~i~fAGd~~s~~~-~-g-~veGA~~SG~~AA~~i~~ 368 (373)
.|+||||||-+..++ . | -.+.|..||..|++.+.+
T Consensus 363 ~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~~ 400 (401)
T 2gqf_A 363 VSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSISR 400 (401)
T ss_dssp STTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHhc
Confidence 358999999988653 2 3 568899999999988743
No 225
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=48.63 E-value=13 Score=35.67 Aligned_cols=41 Identities=22% Similarity=0.293 Sum_probs=31.4
Q ss_pred CCCceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcc
Q psy7654 62 DLGKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLG 106 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~ 106 (373)
+.|.+++.+ .|+.|.. ... .|++.+|+++.+|+||+|+-..
T Consensus 68 ~~gv~~~~~-~v~~id~-~~~--~v~~~~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 68 KFNIEFINE-KAESIDP-DAN--TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp GGTEEEECS-CEEEEET-TTT--EEEETTCCEEECSEEEECCCCE
T ss_pred hcCCEEEEE-EEEEEEC-CCC--EEEECCCcEEECCEEEEcCCcc
Confidence 356788764 8999987 444 5666788889999999998654
No 226
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=48.09 E-value=16 Score=35.31 Aligned_cols=41 Identities=17% Similarity=0.278 Sum_probs=32.8
Q ss_pred CceEEcCCceEEEEecCCCcEEEEeC-C--CcEEEcCEEEEcCCc
Q psy7654 64 GKKLLLNKEVTKINWEDANGVLVTCA-D--GSQYSADKVLITVSL 105 (373)
Q Consensus 64 G~~I~ln~~V~~I~~~~~~~v~v~~~-~--G~~~~ad~VIvtiP~ 105 (373)
|.+++++++|+.|.. .++.+.+... + +.++.+|++|+|+-.
T Consensus 72 gv~~~~~~~v~~i~~-~~~~v~v~~~~~g~~~~~~~d~lviAtGs 115 (452)
T 2cdu_A 72 GANVQMRHQVTNVDP-ETKTIKVKDLITNEEKTEAYDKLIMTTGS 115 (452)
T ss_dssp TCEEEESEEEEEEEG-GGTEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred CCEEEeCCEEEEEEc-CCCEEEEEecCCCceEEEECCEEEEccCC
Confidence 478999999999987 6677777652 2 457899999999874
No 227
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=48.00 E-value=24 Score=34.08 Aligned_cols=41 Identities=27% Similarity=0.293 Sum_probs=32.2
Q ss_pred CCCceEEcCCceEEEEecCCCcEEEEeCCC-cEEEcCEEEEcCCc
Q psy7654 62 DLGKKLLLNKEVTKINWEDANGVLVTCADG-SQYSADKVLITVSL 105 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G-~~~~ad~VIvtiP~ 105 (373)
+.|.+++++++|++|.. +.+.|.+.+| .++.+|+||+|+-.
T Consensus 71 ~~gi~v~~~~~v~~i~~---~~~~v~~~~g~~~~~~d~lviAtG~ 112 (449)
T 3kd9_A 71 KRGIDLHLNAEVIEVDT---GYVRVRENGGEKSYEWDYLVFANGA 112 (449)
T ss_dssp HTTCEEETTCEEEEECS---SEEEEECSSSEEEEECSEEEECCCE
T ss_pred hcCcEEEecCEEEEEec---CCCEEEECCceEEEEcCEEEECCCC
Confidence 34689999999999965 3466777676 47899999999864
No 228
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=47.82 E-value=16 Score=30.11 Aligned_cols=35 Identities=17% Similarity=0.033 Sum_probs=28.2
Q ss_pred ceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhC
Q psy7654 335 QVLLFAGEASNEHQYGTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 335 ~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~ 370 (373)
++||.+||-.... ...+.-|+..|..||..|...+
T Consensus 136 ~~i~a~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~~ 170 (180)
T 2ywl_A 136 PRVYAAGVARGKV-PGHAIISAGDGAYVAVHLVSDL 170 (180)
T ss_dssp TTEEECGGGGTCC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeecccCcc-hhhHHHHHHhHHHHHHHHHHHh
Confidence 3799999987753 2367889999999999998754
No 229
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=47.26 E-value=20 Score=35.59 Aligned_cols=57 Identities=12% Similarity=0.183 Sum_probs=37.3
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCC---CcEEEE--eCCC-c--EEEcCEEEEcCCcc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDA---NGVLVT--CADG-S--QYSADKVLITVSLG 106 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~---~~v~v~--~~~G-~--~~~ad~VIvtiP~~ 106 (373)
..+.+.+.+.+. +.|.+|++++.|++|....+ +++.++ ..+| + ++.+|.||+++...
T Consensus 250 ~~~~~~~~~~l~-----~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 250 QDMANKIGEHME-----EHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp HHHHHHHHHHHH-----HTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHHH-----HCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCc
Confidence 344555555554 55789999999988876322 445443 3444 2 46799999998653
No 230
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=44.45 E-value=32 Score=34.65 Aligned_cols=56 Identities=18% Similarity=0.201 Sum_probs=36.9
Q ss_pred HHHHHHHHhCCCCCCCCCCceEEcCCceEEEEec-----CC---CcEEEE--eCCCcEEE--cCEEEEcCCcc
Q psy7654 46 NVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWE-----DA---NGVLVT--CADGSQYS--ADKVLITVSLG 106 (373)
Q Consensus 46 ~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~-----~~---~~v~v~--~~~G~~~~--ad~VIvtiP~~ 106 (373)
.+.+.+.+.+. +.|.++++++.|++|... .+ +++.+. ..+|+++. +|.||+|+...
T Consensus 327 ~~~~~~~~~l~-----~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~ 394 (598)
T 2x8g_A 327 QMAEKVGDYME-----NHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGRE 394 (598)
T ss_dssp HHHHHHHHHHH-----HTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHHHHH-----hCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCc
Confidence 44445555544 457899999999888652 11 445444 45676665 99999998653
No 231
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=43.84 E-value=20 Score=36.90 Aligned_cols=41 Identities=24% Similarity=0.359 Sum_probs=31.9
Q ss_pred CCCceEEcCCceEEEEecCCCcEEEEeCCC--cEEEcCEEEEcCCcc
Q psy7654 62 DLGKKLLLNKEVTKINWEDANGVLVTCADG--SQYSADKVLITVSLG 106 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~v~v~~~~G--~~~~ad~VIvtiP~~ 106 (373)
+.|.+++++++|++|.. +++.+. .+| +++.+|.||+++...
T Consensus 585 ~~GV~v~~~~~v~~i~~---~~v~~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 585 SRGVKMIPGVSYQKIDD---DGLHVV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HTTCEEECSCEEEEEET---TEEEEE-ETTEEEEECCSEEEECCCEE
T ss_pred hcCCEEEeCcEEEEEeC---CeEEEe-cCCeEEEEeCCEEEECCCcc
Confidence 34689999999999974 356664 466 578999999999874
No 232
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=42.37 E-value=17 Score=35.20 Aligned_cols=40 Identities=23% Similarity=0.189 Sum_probs=31.0
Q ss_pred CCceEEcCCceEEEEecCCCcEEEEeCCC--cEEEcCEEEEcCCcc
Q psy7654 63 LGKKLLLNKEVTKINWEDANGVLVTCADG--SQYSADKVLITVSLG 106 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~~v~v~~~~G--~~~~ad~VIvtiP~~ 106 (373)
.|.+++.++.+. . +++.+.|.+.+| +++.+|+||+|+-..
T Consensus 104 ~gv~~~~g~~~~---i-d~~~v~V~~~~G~~~~~~~d~lViAtG~~ 145 (464)
T 2a8x_A 104 NKITEIHGYGTF---A-DANTLLVDLNDGGTESVTFDNAIIATGSS 145 (464)
T ss_dssp TTCEEECEEEEE---S-SSSEEEEEETTSCCEEEEEEEEEECCCEE
T ss_pred CCCEEEEeEEEE---e-cCCeEEEEeCCCceEEEEcCEEEECCCCC
Confidence 357898887653 3 567788888777 679999999999764
No 233
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=41.73 E-value=24 Score=36.21 Aligned_cols=42 Identities=14% Similarity=0.205 Sum_probs=31.4
Q ss_pred Cc-eEEcCCceEEEEecCCC---cEE-EE---eCCCc--EEEcCEEEEcCCcc
Q psy7654 64 GK-KLLLNKEVTKINWEDAN---GVL-VT---CADGS--QYSADKVLITVSLG 106 (373)
Q Consensus 64 G~-~I~ln~~V~~I~~~~~~---~v~-v~---~~~G~--~~~ad~VIvtiP~~ 106 (373)
|+ +|+.+++|++|.. +++ +|. |. ..+|+ ++.|+.||+|+--.
T Consensus 166 gv~~i~~~~~v~~L~~-~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~ 217 (643)
T 1jnr_A 166 GEENIYERVFIFELLK-DNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGA 217 (643)
T ss_dssp CGGGEECSEEEEEEEE-CTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred CCcEEEecCEEEEEEE-cCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcc
Confidence 68 8999999999998 555 542 22 24564 57899999988764
No 234
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=40.22 E-value=36 Score=32.22 Aligned_cols=38 Identities=11% Similarity=0.238 Sum_probs=30.8
Q ss_pred CceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 64 GKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 64 G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
|.++++ ++|++|.. ... .|++.+|+++.+|++|+|+-.
T Consensus 71 ~i~~~~-~~v~~id~-~~~--~v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 71 AIELIS-DRMVSIDR-EGR--KLLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp TEEEEC-CCEEEEET-TTT--EEEESSSCEEECSEEEECCCE
T ss_pred CCEEEE-EEEEEEEC-CCC--EEEECCCCEEECCEEEEeeCC
Confidence 478888 99999987 444 466678889999999999875
No 235
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=39.88 E-value=19 Score=33.31 Aligned_cols=57 Identities=11% Similarity=0.067 Sum_probs=38.7
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEE-EEe-CCC--cEEEcCEEEEcCCccc
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVL-VTC-ADG--SQYSADKVLITVSLGV 107 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~-v~~-~~G--~~~~ad~VIvtiP~~~ 107 (373)
..+-+.|++.+. +.|++++++++|+.+.. +++++. +.. .++ .++++|.||-|--.+.
T Consensus 102 ~~~~~~L~~~a~-----~~G~~~~~~~~v~~~~~-~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 102 DKFDKHLAALAA-----KAGADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHH-----HHTCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHH-----hcCcEEeeeeeeeeeee-ccceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 344555555544 45789999999999998 666653 222 233 3578999999977654
No 236
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=38.77 E-value=11 Score=34.20 Aligned_cols=39 Identities=18% Similarity=0.174 Sum_probs=29.9
Q ss_pred ceEEEeccccCCCC-----cchhhHHHHHHHHHHHHHHhhCCCC
Q psy7654 335 QVLLFAGEASNEHQ-----YGTVNGAVETGWREADRILKSDPAP 373 (373)
Q Consensus 335 ~~i~fAGd~~s~~~-----~g~veGA~~SG~~AA~~i~~~~~~~ 373 (373)
|++|.+|+.+...+ .....+|+.||..||..|.+.|+++
T Consensus 234 p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~~ 277 (284)
T 1rp0_A 234 PGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLP 277 (284)
T ss_dssp TTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhhhh
Confidence 37999998764210 1256799999999999999988753
No 237
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=38.71 E-value=23 Score=34.36 Aligned_cols=40 Identities=8% Similarity=0.115 Sum_probs=30.6
Q ss_pred CCceEEcCCceEEEEecCCCcEEEEeCCC--cEEEcCEEEEcCCcc
Q psy7654 63 LGKKLLLNKEVTKINWEDANGVLVTCADG--SQYSADKVLITVSLG 106 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~~v~v~~~~G--~~~~ad~VIvtiP~~ 106 (373)
.|.+++.++.+. + +.+.+.|.+.+| +++.+|+||+|+-..
T Consensus 109 ~gv~~~~g~~~~-~---~~~~~~v~~~~G~~~~i~~d~lIiAtGs~ 150 (470)
T 1dxl_A 109 NKVTYVKGYGKF-V---SPSEISVDTIEGENTVVKGKHIIIATGSD 150 (470)
T ss_dssp HTCEEEESCEEE-E---ETTEEEECCSSSCCEEEECSEEEECCCEE
T ss_pred CCCEEEEeEEEE-e---cCCEEEEEeCCCceEEEEcCEEEECCCCC
Confidence 357899998664 3 346788877777 679999999998863
No 238
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=38.11 E-value=16 Score=33.81 Aligned_cols=35 Identities=20% Similarity=0.251 Sum_probs=27.1
Q ss_pred eEEEeccccCCCCc---chhhHHHHHHHHHHHHHHhhC
Q psy7654 336 VLLFAGEASNEHQY---GTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 336 ~i~fAGd~~s~~~~---g~veGA~~SG~~AA~~i~~~~ 370 (373)
|++++||+.....| .-|.-|+++|..||+.|.+.+
T Consensus 278 ~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l 315 (397)
T 3oz2_A 278 GLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAI 315 (397)
T ss_dssp TEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 89999999765433 237779999999998887643
No 239
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=36.72 E-value=17 Score=35.08 Aligned_cols=32 Identities=22% Similarity=0.305 Sum_probs=24.8
Q ss_pred CceEEEeccccCCCC-c-c-hhhHHHHHHHHHHHH
Q psy7654 334 KQVLLFAGEASNEHQ-Y-G-TVNGAVETGWREADR 365 (373)
Q Consensus 334 ~~~i~fAGd~~s~~~-~-g-~veGA~~SG~~AA~~ 365 (373)
.|+||||||-+..++ . | -++-|..||..|++.
T Consensus 382 ~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 382 VPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp STTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 368999999887653 2 3 678899999987764
No 240
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=36.13 E-value=28 Score=32.74 Aligned_cols=38 Identities=13% Similarity=-0.003 Sum_probs=30.4
Q ss_pred CCceEEEeccccCCC-CcchhhHHHHHHHHHHHHHHhhC
Q psy7654 333 GKQVLLFAGEASNEH-QYGTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~-~~g~veGA~~SG~~AA~~i~~~~ 370 (373)
+.|+||-+||.+... .+.+.+-|...|..+|+.|++.+
T Consensus 285 ~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l 323 (401)
T 3vrd_B 285 LQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALL 323 (401)
T ss_dssp SSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 346899999987643 35678889999999999998754
No 241
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=35.44 E-value=26 Score=33.99 Aligned_cols=34 Identities=12% Similarity=0.039 Sum_probs=27.6
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILK 368 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~ 368 (373)
+.|+||.+||-... +...+-|+..|..||..|+.
T Consensus 316 ~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 316 KFPHIKVVGDVTFG--PMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp SSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 44689999998763 45678899999999999875
No 242
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=35.13 E-value=39 Score=33.16 Aligned_cols=55 Identities=15% Similarity=0.175 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEecCCCcEEEEe-CCCc--EEEcCEEEEcCCc
Q psy7654 44 YGNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINWEDANGVLVTC-ADGS--QYSADKVLITVSL 105 (373)
Q Consensus 44 ~~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~~~~~~v~v~~-~~G~--~~~ad~VIvtiP~ 105 (373)
...+.+.+.+.+. .|.++++++.|.+|.. .+..+.+.. .+++ ++.+|++|+|+-.
T Consensus 160 ~~~~~~~l~~~l~------~~v~~~~~~~v~~i~~-~~~~~~~~~~~~~~~~~~~~d~lvlAtGa 217 (493)
T 1y56_A 160 SRKVVEELVGKLN------ENTKIYLETSALGVFD-KGEYFLVPVVRGDKLIEILAKRVVLATGA 217 (493)
T ss_dssp HHHHHHHHHHTCC------TTEEEETTEEECCCEE-CSSSEEEEEEETTEEEEEEESCEEECCCE
T ss_pred HHHHHHHHHHHHh------cCCEEEcCCEEEEEEc-CCcEEEEEEecCCeEEEEECCEEEECCCC
Confidence 3456666666652 3578999999999998 666665544 3453 6899999999865
No 243
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=34.79 E-value=28 Score=34.52 Aligned_cols=37 Identities=14% Similarity=0.110 Sum_probs=30.0
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhC
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~ 370 (373)
+.|+||.|||.+... +..+.-|+.+|..||..|.+.|
T Consensus 479 s~p~VfA~GD~~~~~-~~~~~~A~~~g~~aa~~i~~~L 515 (521)
T 1hyu_A 479 SVKGVFAAGDCTTVP-YKQIIIATGEGAKASLSAFDYL 515 (521)
T ss_dssp SSTTEEECSTTBCCS-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCCC-cceeeehHHhHHHHHHHHHHHH
Confidence 457899999987653 3568899999999999998754
No 244
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=34.00 E-value=48 Score=31.94 Aligned_cols=42 Identities=21% Similarity=0.131 Sum_probs=32.1
Q ss_pred CceEEcCCceEEEEecCCCcEEEEeCC---CcEEEcCEEEEcCCcc
Q psy7654 64 GKKLLLNKEVTKINWEDANGVLVTCAD---GSQYSADKVLITVSLG 106 (373)
Q Consensus 64 G~~I~ln~~V~~I~~~~~~~v~v~~~~---G~~~~ad~VIvtiP~~ 106 (373)
|.+++++++|++|.. ....+.+.... +.++.+|++|+|+-..
T Consensus 71 ~i~~~~~~~V~~id~-~~~~~~~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 71 QITVKTYHEVIAIND-ERQTVSVLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp CCEEEETEEEEEEET-TTTEEEEEETTTTEEEEEECSEEEECCCEE
T ss_pred CCEEEeCCeEEEEEc-cCcEEEEEeccCCceEEEEcCEEEECCCCc
Confidence 478999999999987 66666665432 3457899999998764
No 245
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=33.78 E-value=40 Score=32.66 Aligned_cols=35 Identities=17% Similarity=0.182 Sum_probs=29.4
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKS 369 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~ 369 (373)
+.++||.+||.... +....-|...|..||..|+..
T Consensus 299 ~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 299 NIPNVFATGDANGL--APYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp SSTTEEECGGGTCS--CCSHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEecCCC--CccHhHHHHHHHHHHHHHhCC
Confidence 45789999998764 567889999999999999854
No 246
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=33.49 E-value=27 Score=33.17 Aligned_cols=37 Identities=14% Similarity=0.037 Sum_probs=30.0
Q ss_pred CCceEEEeccccCCC--CcchhhHHHHHHHHHHHHHHhh
Q psy7654 333 GKQVLLFAGEASNEH--QYGTVNGAVETGWREADRILKS 369 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~--~~g~veGA~~SG~~AA~~i~~~ 369 (373)
+.++||.+||..... .++.+.-|+.+|..||..|+..
T Consensus 256 ~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 294 (385)
T 3klj_A 256 SIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGE 294 (385)
T ss_dssp SSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCC
Confidence 446899999988643 2578899999999999999753
No 247
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=33.42 E-value=40 Score=32.78 Aligned_cols=36 Identities=17% Similarity=0.058 Sum_probs=29.3
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKS 369 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~ 369 (373)
+.++||.+||.+.+ .+..++-|+..|..||..|+..
T Consensus 317 ~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 317 NVANIYAVGDIIYG-KPELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp SSTTEEECSTTBTT-SCCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEEcccCC-CCccHHHHHHHHHHHHHHHcCC
Confidence 45789999998753 2567888999999999999854
No 248
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=32.78 E-value=42 Score=32.73 Aligned_cols=36 Identities=14% Similarity=0.172 Sum_probs=29.2
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKS 369 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~ 369 (373)
+.++||.+||.+.+ .+...+-|+..|..||..|+..
T Consensus 317 ~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 317 SVPHIYAIGDVAEG-RPELTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp SSTTEEECGGGBTT-CCCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEeEEecCC-CCcchhHHHHHHHHHHHHHcCC
Confidence 45789999998753 3457888999999999999854
No 249
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=32.30 E-value=42 Score=32.42 Aligned_cols=35 Identities=9% Similarity=0.045 Sum_probs=29.0
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKS 369 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~ 369 (373)
+.++||.+||.... +...+-|...|..||..|+..
T Consensus 297 ~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g~ 331 (463)
T 4dna_A 297 STPGIYALGDVTDR--VQLTPVAIHEAMCFIETEYKN 331 (463)
T ss_dssp SSTTEEECSGGGSS--CCCHHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEEecCCC--CCChHHHHHHHHHHHHHHcCC
Confidence 44789999998763 567889999999999999864
No 250
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=31.95 E-value=26 Score=36.20 Aligned_cols=42 Identities=10% Similarity=0.141 Sum_probs=30.5
Q ss_pred CceEEcCCceEEEEecCCC---cEE---EE-eCCCc--EEEcCEEEEcCCcc
Q psy7654 64 GKKLLLNKEVTKINWEDAN---GVL---VT-CADGS--QYSADKVLITVSLG 106 (373)
Q Consensus 64 G~~I~ln~~V~~I~~~~~~---~v~---v~-~~~G~--~~~ad~VIvtiP~~ 106 (373)
|++|+.++.|++|.. +++ +|. +. ..+|+ .+.|++||+|+--.
T Consensus 182 gV~i~~~~~v~dLi~-~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~ 232 (662)
T 3gyx_A 182 QDRIIERIFIVKLLL-DKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGA 232 (662)
T ss_dssp TTTEECSEEECCCEE-CSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred CcEEEEceEEEEEEE-eCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcc
Confidence 578999999999988 554 542 22 24554 57899999998754
No 251
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=31.62 E-value=46 Score=32.90 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=29.4
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKS 369 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~ 369 (373)
+.++||.+||...+ .+...+-|+..|..||..|+..
T Consensus 345 s~~~IyA~GD~~~g-~~~~~~~A~~~g~~aa~~i~g~ 380 (519)
T 3qfa_A 345 NVPYIYAIGDILED-KVELTPVAIQAGRLLAQRLYAG 380 (519)
T ss_dssp SSTTEEECGGGBSS-SCCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEEeccCC-CCccHHHHHHHHHHHHHHHcCC
Confidence 45789999998743 3567899999999999999853
No 252
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=30.55 E-value=31 Score=35.51 Aligned_cols=34 Identities=15% Similarity=0.178 Sum_probs=24.0
Q ss_pred eEEEeccccCCCCc---chhhHHHHHHHHHHHHHHhh
Q psy7654 336 VLLFAGEASNEHQY---GTVNGAVETGWREADRILKS 369 (373)
Q Consensus 336 ~i~fAGd~~s~~~~---g~veGA~~SG~~AA~~i~~~ 369 (373)
|++++||+.+...| .-|+-|++.|...|.+|...
T Consensus 352 RV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~v 388 (665)
T 1pn0_A 352 RVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLV 388 (665)
T ss_dssp TEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHH
Confidence 89999998876543 24777777777777766543
No 253
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=30.39 E-value=44 Score=33.40 Aligned_cols=39 Identities=13% Similarity=0.266 Sum_probs=30.1
Q ss_pred ceEEc--CCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcccc
Q psy7654 65 KKLLL--NKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGVF 108 (373)
Q Consensus 65 ~~I~l--n~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~l 108 (373)
+++.. +++|++|.. ++ |.+.+|+++++|.||+|+-....
T Consensus 345 V~lv~~~~~~I~~it~---~g--v~~~dG~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 345 VEAVAIKENPIREVTA---KG--VVTEDGVLHELDVLVFATGFDAV 385 (540)
T ss_dssp EEEEETTTSCEEEECS---SE--EEETTCCEEECSEEEECCCBSCS
T ss_pred EEEEeCCCCCccEEec---Ce--EEcCCCCEEECCEEEECCccCcc
Confidence 55654 788888854 34 66788988999999999988653
No 254
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=30.34 E-value=43 Score=32.65 Aligned_cols=35 Identities=6% Similarity=0.048 Sum_probs=28.5
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKS 369 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~ 369 (373)
+.++||.+||.... +...+-|+..|..||..|+..
T Consensus 317 ~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 317 NVSHIWAVGDVTGH--IQLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp SSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHC-
T ss_pred CCCCEEEEEecCCC--CcCHHHHHHHHHHHHHHHcCC
Confidence 44789999998763 467889999999999999853
No 255
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=30.00 E-value=51 Score=32.42 Aligned_cols=41 Identities=15% Similarity=0.094 Sum_probs=29.8
Q ss_pred ceEEcCCceEEEEecCC-C-cE-EEEe--CCC-----cEEEcCEEEEcCCcc
Q psy7654 65 KKLLLNKEVTKINWEDA-N-GV-LVTC--ADG-----SQYSADKVLITVSLG 106 (373)
Q Consensus 65 ~~I~ln~~V~~I~~~~~-~-~v-~v~~--~~G-----~~~~ad~VIvtiP~~ 106 (373)
.+|+++++|++|.. ++ + ++ .|.. .+| .++.|+.||+|.-.-
T Consensus 237 ~~i~~~~~V~~i~~-~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~ 287 (504)
T 1n4w_A 237 VTIQTLHQVKTIRQ-TKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSL 287 (504)
T ss_dssp EEEEESEEEEEEEE-CTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHH
T ss_pred cEEEeCCEEEEEEE-CCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCC
Confidence 69999999999998 43 3 32 3443 356 357899999988764
No 256
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=29.78 E-value=64 Score=30.15 Aligned_cols=38 Identities=11% Similarity=0.191 Sum_probs=29.3
Q ss_pred CceEEcCCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCc
Q psy7654 64 GKKLLLNKEVTKINWEDANGVLVTCADGSQYSADKVLITVSL 105 (373)
Q Consensus 64 G~~I~ln~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~ 105 (373)
|.+++++++|+.|.. .+..+. +.+ .++.+|++|+|+-.
T Consensus 74 ~v~~~~~~~v~~i~~-~~~~v~--~~~-~~~~~d~lviAtG~ 111 (384)
T 2v3a_A 74 NARILTHTRVTGIDP-GHQRIW--IGE-EEVRYRDLVLAWGA 111 (384)
T ss_dssp TCEEECSCCCCEEEG-GGTEEE--ETT-EEEECSEEEECCCE
T ss_pred CcEEEeCCEEEEEEC-CCCEEE--ECC-cEEECCEEEEeCCC
Confidence 478999999999987 444444 444 47999999999875
No 257
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=29.02 E-value=45 Score=32.35 Aligned_cols=35 Identities=14% Similarity=0.187 Sum_probs=29.0
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKS 369 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~ 369 (373)
+.++||.+||... .+...+-|+..|..||..|+..
T Consensus 322 ~~~~IyA~GD~~~--~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 322 NVKGIYAVGDVCG--KALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp SSTTEEECGGGGC--SSCCHHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEEecCC--CCccHhHHHHHHHHHHHHHcCC
Confidence 4578999999874 3567889999999999999854
No 258
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=28.88 E-value=54 Score=31.69 Aligned_cols=35 Identities=20% Similarity=0.110 Sum_probs=28.9
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKS 369 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~ 369 (373)
+.++||.+||.... +...+-|...|..||..|+..
T Consensus 309 ~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g~ 343 (476)
T 3lad_A 309 SVPGVYAIGDVVRG--AMLAHKASEEGVVVAERIAGH 343 (476)
T ss_dssp SSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEEccCCC--cccHHHHHHHHHHHHHHhcCC
Confidence 44689999998743 457889999999999999854
No 259
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=28.57 E-value=72 Score=31.80 Aligned_cols=39 Identities=15% Similarity=0.345 Sum_probs=30.2
Q ss_pred CceEEc--CCceEEEEecCCCcEEEEeCCCcEEEcCEEEEcCCcccc
Q psy7654 64 GKKLLL--NKEVTKINWEDANGVLVTCADGSQYSADKVLITVSLGVF 108 (373)
Q Consensus 64 G~~I~l--n~~V~~I~~~~~~~v~v~~~~G~~~~ad~VIvtiP~~~l 108 (373)
++++.. +++|++|.. ++ |.+.+| ++++|.||+|+-....
T Consensus 352 nV~lv~~~~~~I~~it~---~g--v~~~dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 352 NVHLVDIREAPIQEVTP---EG--IKTADA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp TEEEEETTTSCEEEEET---TE--EEESSC-EEECSEEEECCCCBSS
T ss_pred CEEEEecCCCCceEEcc---Ce--EEeCCC-eeecCEEEECCccccc
Confidence 466665 789999864 34 566788 9999999999998753
No 260
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=28.36 E-value=56 Score=32.17 Aligned_cols=41 Identities=17% Similarity=0.128 Sum_probs=29.5
Q ss_pred ceEEcCCceEEEEecCC-C-cE-EEEe--CCC-----cEEEcCEEEEcCCcc
Q psy7654 65 KKLLLNKEVTKINWEDA-N-GV-LVTC--ADG-----SQYSADKVLITVSLG 106 (373)
Q Consensus 65 ~~I~ln~~V~~I~~~~~-~-~v-~v~~--~~G-----~~~~ad~VIvtiP~~ 106 (373)
.+|++++.|++|.. ++ + ++ .|.. .+| .++.|+.||++.-.-
T Consensus 242 ~~i~~~~~v~~i~~-~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~ 292 (507)
T 1coy_A 242 LTITTLHRVTKVAP-ATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSV 292 (507)
T ss_dssp EEEECSEEEEEEEE-CSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHH
T ss_pred cEEEeCCEEEEEEE-CCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCcc
Confidence 68999999999998 44 3 22 3443 255 357899999987664
No 261
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=28.27 E-value=51 Score=32.12 Aligned_cols=35 Identities=14% Similarity=0.030 Sum_probs=29.1
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKS 369 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~ 369 (373)
+.++||.+||.... +....-|+..|..||..|+..
T Consensus 329 ~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g~ 363 (491)
T 3urh_A 329 SIAGVYAIGDVVRG--PMLAHKAEDEGVAVAEIIAGQ 363 (491)
T ss_dssp SSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEEecCCC--ccchhHHHHHHHHHHHHHcCC
Confidence 44789999998743 568899999999999999753
No 262
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=28.14 E-value=49 Score=32.39 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=28.7
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILK 368 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~ 368 (373)
+.++||.+||.+.. +...+-|+..|..||..|+.
T Consensus 304 ~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 304 SVDHIFVAGDANNT--LTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp SSTTEEECGGGGTS--SCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecCCC--CccHHHHHHHHHHHHHHHcC
Confidence 44689999998764 45788999999999999986
No 263
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=27.95 E-value=38 Score=36.80 Aligned_cols=36 Identities=17% Similarity=0.077 Sum_probs=29.6
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhC
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~ 370 (373)
+.++||.+||...+ +..+.-|+..|..||..|...|
T Consensus 472 s~~~VfA~GD~~~~--~~~~~~A~~~G~~aA~~i~~~L 507 (1025)
T 1gte_A 472 SEPWVFAGGDIVGM--ANTTVESVNDGKQASWYIHKYI 507 (1025)
T ss_dssp SSTTEEECSGGGCS--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeCCCCCC--chHHHHHHHHHHHHHHHHHHHH
Confidence 34689999998763 5678899999999999998643
No 264
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=27.63 E-value=47 Score=32.80 Aligned_cols=37 Identities=16% Similarity=0.019 Sum_probs=31.1
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKS 369 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~ 369 (373)
+.++||-+||-.....+.+-+-|.+.|..+|+.|...
T Consensus 363 ~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 363 GSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp TCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 4578999999877666778899999999999998653
No 265
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=26.84 E-value=44 Score=32.65 Aligned_cols=35 Identities=14% Similarity=0.012 Sum_probs=28.0
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKS 369 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~ 369 (373)
+.++||.+||-... +...+-|...|..||..|+..
T Consensus 308 ~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 308 LATGIYAAGDCTGL--LPLASVAAMQGRIAMYHALGE 342 (499)
T ss_dssp SSTTEEECSGGGTS--CSCHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhcCC
Confidence 45689999998764 456778999999999999753
No 266
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=26.69 E-value=42 Score=34.51 Aligned_cols=34 Identities=26% Similarity=0.199 Sum_probs=28.1
Q ss_pred CceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhC
Q psy7654 334 KQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSD 370 (373)
Q Consensus 334 ~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~ 370 (373)
.++||.+||.... +.+.-|+.+|..||..|+..|
T Consensus 641 ~~~VyaiGD~~~~---~~~~~A~~~g~~aa~~i~~~l 674 (690)
T 3k30_A 641 IASVRGIGDAWAP---GTIAAAVWSGRRAAEEFDAVL 674 (690)
T ss_dssp CSEEEECGGGTSC---BCHHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEeCCCch---hhHHHHHHHHHHHHHHHHhhc
Confidence 3589999998764 456669999999999998875
No 267
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=26.55 E-value=30 Score=33.75 Aligned_cols=34 Identities=15% Similarity=0.100 Sum_probs=27.5
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILK 368 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~ 368 (373)
+.|+||.+||-... +...+-|...|..||..|+.
T Consensus 315 ~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 315 NVPHIYAIGDIVGQ--PMLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp SSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEcccCC--CccHHHHHHHHHHHHHHHcC
Confidence 44689999998763 45678899999999999875
No 268
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=26.41 E-value=30 Score=35.97 Aligned_cols=42 Identities=14% Similarity=0.167 Sum_probs=30.4
Q ss_pred CCCceEEcCCceEEEEecCCCcEEEEe--CCC-cE------------------EEcCEEEEcCCcc
Q psy7654 62 DLGKKLLLNKEVTKINWEDANGVLVTC--ADG-SQ------------------YSADKVLITVSLG 106 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~~v~v~~--~~G-~~------------------~~ad~VIvtiP~~ 106 (373)
+.|+++++++.|++|.. +++.+.. .++ ++ +.+|.||+++...
T Consensus 583 ~~GV~i~~~~~v~~i~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~ 645 (729)
T 1o94_A 583 ELHVEELGDHFCSRIEP---GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRH 645 (729)
T ss_dssp HTTCEEECSEEEEEEET---TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEE
T ss_pred hCCCEEEcCcEEEEEEC---CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCC
Confidence 45799999999999974 2455442 222 32 8999999999863
No 269
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=26.26 E-value=66 Score=32.21 Aligned_cols=37 Identities=14% Similarity=0.127 Sum_probs=29.4
Q ss_pred CCCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhh
Q psy7654 332 QGKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKS 369 (373)
Q Consensus 332 ~~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~ 369 (373)
++.++||.+||...+ .+..+.-|+..|..||..|+..
T Consensus 423 ts~~~VyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 423 TTVSNVYAIGDINAG-KPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp CSSTTEEECGGGBTT-SCCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEeeecCC-CCccHHHHHHhHHHHHHHHhcC
Confidence 345789999998543 2457889999999999999853
No 270
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=26.08 E-value=55 Score=31.83 Aligned_cols=42 Identities=10% Similarity=0.109 Sum_probs=29.4
Q ss_pred CCceEEcCCceEEEEecCC-C-c---EEEEeC-------------CC--cEEEcCEEEEcCCc
Q psy7654 63 LGKKLLLNKEVTKINWEDA-N-G---VLVTCA-------------DG--SQYSADKVLITVSL 105 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~-~-~---v~v~~~-------------~G--~~~~ad~VIvtiP~ 105 (373)
+|.+|++++.+.+|.. ++ + + +.+... +| +++.+|.||+++..
T Consensus 270 ~gv~~~~~~~~~~i~~-~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~ 331 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLP-SPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGY 331 (460)
T ss_dssp EEEEEECSEEEEEEEE-CTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCE
T ss_pred ceEEEECCCChheEEc-CCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCC
Confidence 6789999999999987 43 4 3 333210 23 46889999998765
No 271
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=25.55 E-value=57 Score=31.71 Aligned_cols=42 Identities=12% Similarity=0.109 Sum_probs=29.8
Q ss_pred CCceEEcCCceEEEEecCCC--cEEEEe--------------CCC--cEEEcCEEEEcCCc
Q psy7654 63 LGKKLLLNKEVTKINWEDAN--GVLVTC--------------ADG--SQYSADKVLITVSL 105 (373)
Q Consensus 63 ~G~~I~ln~~V~~I~~~~~~--~v~v~~--------------~~G--~~~~ad~VIvtiP~ 105 (373)
.|.+|++++.|.+|.. ++. ++.+.. .+| +++.+|.||+++..
T Consensus 265 ~gv~i~~~~~~~~i~~-~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~ 324 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKG-KRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGY 324 (456)
T ss_dssp EEEEEECSEEEEEEEC-SSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCE
T ss_pred ceEEEEeCCCCeEEec-CCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccc
Confidence 6789999999999986 432 244431 134 45889999999875
No 272
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=25.52 E-value=56 Score=31.51 Aligned_cols=35 Identities=11% Similarity=0.038 Sum_probs=28.7
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILK 368 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~ 368 (373)
+.++||.+||.... .+...+-|...|..||..|+.
T Consensus 305 ~~~~IyA~GD~~~~-~~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 305 SIPDVYAIGDVVDK-GPMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp SSTTEEECGGGBSS-SCSCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeeccCCC-CCccHhHHHHHHHHHHHHHcC
Confidence 45789999998762 346788899999999999975
No 273
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=25.32 E-value=69 Score=30.80 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=28.3
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILK 368 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~ 368 (373)
+.++||.+||.... +...+-|...|..||..|+.
T Consensus 294 ~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 294 NIEGIYAVGDNTGA--VELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp SSTTEEECSGGGTS--CCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeccCCC--CccHHHHHHHHHHHHHHHcC
Confidence 45789999998653 45788899999999999975
No 274
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=25.29 E-value=57 Score=31.67 Aligned_cols=34 Identities=12% Similarity=0.202 Sum_probs=28.3
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILK 368 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~ 368 (373)
+.|+||.+||-... +....-|...|..||..|+.
T Consensus 313 ~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 313 NVPNIYSLGDVVGK--VELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp SSTTEEECGGGTTS--SCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEEecCCC--cccHHHHHHHHHHHHHHhcC
Confidence 45789999998643 45788999999999999974
No 275
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=25.23 E-value=55 Score=31.67 Aligned_cols=35 Identities=9% Similarity=-0.011 Sum_probs=28.7
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKS 369 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~ 369 (373)
+.++||.+||.... +...+-|...|..||..|+..
T Consensus 311 ~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~~~ 345 (474)
T 1zmd_A 311 KIPNIYAIGDVVAG--PMLAHKAEDEGIICVEGMAGG 345 (474)
T ss_dssp SSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEeeecCCC--CccHHHHHHHHHHHHHHhcCC
Confidence 45789999998753 457788999999999999753
No 276
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=24.69 E-value=87 Score=30.93 Aligned_cols=41 Identities=17% Similarity=0.187 Sum_probs=30.1
Q ss_pred CCceEEEeccccCCCCc--chhhHHHHHHHHHHHHHHhhCCCC
Q psy7654 333 GKQVLLFAGEASNEHQY--GTVNGAVETGWREADRILKSDPAP 373 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~--g~veGA~~SG~~AA~~i~~~~~~~ 373 (373)
+..+|+.+...+-...+ -..--.+-=|+|||+.|++.+..|
T Consensus 504 Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~~~ 546 (546)
T 1kdg_A 504 GTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAGGP 546 (546)
T ss_dssp TCSSEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHSTTCC
T ss_pred cCCCcEEeEecccCCCCCccHHHHHHHHHHHHHHHHHhhcCCC
Confidence 34689999887754322 255666788999999999887655
No 277
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=24.44 E-value=99 Score=30.65 Aligned_cols=43 Identities=16% Similarity=0.226 Sum_probs=29.6
Q ss_pred CCCceEEcCCceEEEEecCCC---cE-EEEe--CCCcE--E---EcCEEEEcCCc
Q psy7654 62 DLGKKLLLNKEVTKINWEDAN---GV-LVTC--ADGSQ--Y---SADKVLITVSL 105 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~~---~v-~v~~--~~G~~--~---~ad~VIvtiP~ 105 (373)
+.|.+|+.++.|++|.. +++ ++ .|.. .+|+. + .++.||+|.-.
T Consensus 206 ~~~~~v~~~~~v~~i~~-~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa 259 (536)
T 1ju2_A 206 SNNLRVGVHASVEKIIF-SNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGT 259 (536)
T ss_dssp TTTEEEEESCEEEEEEE-CCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHH
T ss_pred CCCcEEEeCCEEEEEEE-CCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcc
Confidence 56789999999999998 442 33 2443 35653 3 46789988665
No 278
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=24.15 E-value=52 Score=35.49 Aligned_cols=43 Identities=16% Similarity=0.251 Sum_probs=31.2
Q ss_pred CCCceEEcCCceEEEEecC-CCc---EEEEe--C---CC--cEEEcCEEEEcCCc
Q psy7654 62 DLGKKLLLNKEVTKINWED-ANG---VLVTC--A---DG--SQYSADKVLITVSL 105 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~-~~~---v~v~~--~---~G--~~~~ad~VIvtiP~ 105 (373)
+.|.+|++++.|++|.. . +++ +.+.. . +| +++.+|.||+++..
T Consensus 328 ~~GV~v~~~~~v~~i~~-~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 328 ADGVQVISGSVVVDTEA-DENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp HTTCCEEETEEEEEEEE-CTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred hCCeEEEeCCEeEEEec-cCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 35789999999999987 3 443 34443 1 24 57899999999874
No 279
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=22.76 E-value=62 Score=32.96 Aligned_cols=40 Identities=18% Similarity=0.242 Sum_probs=29.2
Q ss_pred CCceEEEeccccCCCCcc--hhhHHHHHHHHHHHHHHhhCCC
Q psy7654 333 GKQVLLFAGEASNEHQYG--TVNGAVETGWREADRILKSDPA 372 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g--~veGA~~SG~~AA~~i~~~~~~ 372 (373)
+.+|||.++..+-....+ -.--.+--|+|+|+.|.+.+++
T Consensus 574 ~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~~ 615 (623)
T 3pl8_A 574 GFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTP 615 (623)
T ss_dssp TCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCCC
T ss_pred cCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhhc
Confidence 346899998887554322 3556678899999999988764
No 280
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=22.69 E-value=65 Score=31.05 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=28.2
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILK 368 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~ 368 (373)
..++||.+||-... +....-|...|..||..|+.
T Consensus 300 ~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 300 SNPNIYAAGDCTDQ--PQFVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp SSTTEEECSTTBSS--CCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeccCCC--cccHHHHHHHHHHHHHHHcC
Confidence 44689999998764 45688899999999999875
No 281
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=22.38 E-value=45 Score=34.61 Aligned_cols=36 Identities=25% Similarity=0.323 Sum_probs=28.8
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHhhCC
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILKSDP 371 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~~~~ 371 (373)
+.++||.+||... +..+.-|+..|..||..|...++
T Consensus 665 ~~~~VyAiGD~~~---~~~~~~A~~~G~~aA~~i~~~l~ 700 (729)
T 1o94_A 665 DIKGIYLIGDAEA---PRLIADATFTGHRVAREIEEANP 700 (729)
T ss_dssp TCCEEEECGGGTS---CCCHHHHHHHHHHHHHTTTSSCT
T ss_pred CCCCeEEEeCccc---hhhHHHHHHHHHHHHHHhhhhcc
Confidence 3468999999875 34677799999999999987653
No 282
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=22.10 E-value=61 Score=31.25 Aligned_cols=29 Identities=3% Similarity=-0.066 Sum_probs=26.0
Q ss_pred eEEEeccccCCCCcchhhHHHHHHHHHHHHHH
Q psy7654 336 VLLFAGEASNEHQYGTVNGAVETGWREADRIL 367 (373)
Q Consensus 336 ~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~ 367 (373)
+||++|++.... ..|+|++++++++++|.
T Consensus 410 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 438 (453)
T 2bcg_G 410 NIYLSRSYDASS---HFESMTDDVKDIYFRVT 438 (453)
T ss_dssp SEEECCCCCSCS---BSHHHHHHHHHHHHHHH
T ss_pred CEEECCCCCccc---cHHHHHHHHHHHHHHHH
Confidence 799999988764 46999999999999997
No 283
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=21.87 E-value=94 Score=29.24 Aligned_cols=30 Identities=13% Similarity=0.037 Sum_probs=22.2
Q ss_pred HHHHHHHHHhCCCCCCCCCCceEEcCCceEEEEe
Q psy7654 45 GNVLKLLLKQMPGQTPIDLGKKLLLNKEVTKINW 78 (373)
Q Consensus 45 ~~L~~~L~~~l~~~~~~~~G~~I~ln~~V~~I~~ 78 (373)
..+.+.|.+.+.. ..|.+|+.++.|++|..
T Consensus 160 ~d~~~~L~~~a~~----~~gV~i~~~~~V~dLi~ 189 (344)
T 3jsk_A 160 ALFTSTVLSKVLQ----RPNVKLFNATTVEDLIT 189 (344)
T ss_dssp HHHHHHHHHHHHT----CTTEEEEETEEEEEEEE
T ss_pred HHHHHHHHHHHHh----CCCCEEEeCCEEEEEEe
Confidence 4566777766542 23689999999999987
No 284
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=21.68 E-value=85 Score=30.69 Aligned_cols=34 Identities=12% Similarity=0.140 Sum_probs=28.5
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILK 368 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~ 368 (373)
+.++||.+||.... +...+-|+..|..||..|+.
T Consensus 321 ~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 321 NVPNIYAIGDITDR--LMLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp SSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 45689999998753 45788999999999999975
No 285
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=21.48 E-value=86 Score=30.55 Aligned_cols=34 Identities=12% Similarity=0.145 Sum_probs=28.7
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILK 368 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~ 368 (373)
+.++||.+||.... +...+-|+..|..||..|+.
T Consensus 317 ~~~~IyA~GD~~~~--~~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 317 NVDNIYAIGDVTDR--VMLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp SSTTEEECGGGGCS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeccCCC--ccCHHHHHHHHHHHHHHhcC
Confidence 45789999998753 46788999999999999985
No 286
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=21.45 E-value=71 Score=30.83 Aligned_cols=34 Identities=15% Similarity=0.081 Sum_probs=28.2
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILK 368 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~ 368 (373)
+.++||.+||.... +...+-|...|..||..|+.
T Consensus 300 ~~~~Iya~GD~~~~--~~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 300 SVPGVYAIGDAARP--PLLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp SSTTEEECGGGTCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 45789999998754 45678899999999999975
No 287
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=20.97 E-value=88 Score=30.18 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=28.2
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILK 368 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~ 368 (373)
+.++||.+||.... +...+-|+..|..||..|+.
T Consensus 293 ~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 293 NVPGVYALGDITGR--DQLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp SSTTEEECGGGGTS--CCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHcC
Confidence 45789999998653 45788899999999999975
No 288
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=20.95 E-value=42 Score=31.41 Aligned_cols=39 Identities=28% Similarity=0.356 Sum_probs=0.0
Q ss_pred CceEEEecccc----CCCCcc-hhhHHHHHHHHHHHHHHhhCCC
Q psy7654 334 KQVLLFAGEAS----NEHQYG-TVNGAVETGWREADRILKSDPA 372 (373)
Q Consensus 334 ~~~i~fAGd~~----s~~~~g-~veGA~~SG~~AA~~i~~~~~~ 372 (373)
.|+||+||-.. -..-.| ..-|-+.||++||+.|++.|.+
T Consensus 283 ~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~~ 326 (326)
T 2gjc_A 283 VDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFAA 326 (326)
T ss_dssp STTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhhC
No 289
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=20.88 E-value=73 Score=31.37 Aligned_cols=34 Identities=12% Similarity=0.067 Sum_probs=28.4
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILK 368 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~ 368 (373)
+.++||.+||.... +...+-|...|..||..|+.
T Consensus 344 ~~~~IyA~GD~~~~--~~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 344 SVPNVYAVGDLIGG--PMEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp SSTTEEECGGGGCS--SCSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeecCCC--cccHHHHHHHHHHHHHHHcC
Confidence 45689999998764 45788899999999999975
No 290
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=20.75 E-value=1.1e+02 Score=30.41 Aligned_cols=43 Identities=19% Similarity=0.254 Sum_probs=30.7
Q ss_pred CCCceEEcCCceEEEEecCC-CcE-EEEeC-C--Cc--EEEcC-EEEEcCCc
Q psy7654 62 DLGKKLLLNKEVTKINWEDA-NGV-LVTCA-D--GS--QYSAD-KVLITVSL 105 (373)
Q Consensus 62 ~~G~~I~ln~~V~~I~~~~~-~~v-~v~~~-~--G~--~~~ad-~VIvtiP~ 105 (373)
+.|.+|+.++.|++|.. ++ +++ .|... + |+ ++.|+ .||+|.-.
T Consensus 221 ~~~~~i~~~~~V~~i~~-~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~ 271 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVF-DADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGA 271 (546)
T ss_dssp CTTEEEECSCEEEEEEE-CTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHH
T ss_pred CCCcEEEeCCEEEEEEE-CCCCeEEEEEEEECCCCcEEEEEeCccEEEecCc
Confidence 45689999999999998 55 443 34432 2 53 57888 89988765
No 291
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=20.53 E-value=83 Score=30.14 Aligned_cols=34 Identities=12% Similarity=0.144 Sum_probs=28.2
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILK 368 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~ 368 (373)
+.++||.+||.... +...+-|...|..||..|+.
T Consensus 293 ~~~~iya~GD~~~~--~~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 293 RVPHIYAIGDVVRG--PMLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp SSTTEEECGGGSSS--CCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCC--ccCHHHHHHhHHHHHHHHcC
Confidence 34689999998764 45678899999999999975
No 292
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=20.02 E-value=79 Score=30.44 Aligned_cols=34 Identities=18% Similarity=0.100 Sum_probs=28.3
Q ss_pred CCceEEEeccccCCCCcchhhHHHHHHHHHHHHHHh
Q psy7654 333 GKQVLLFAGEASNEHQYGTVNGAVETGWREADRILK 368 (373)
Q Consensus 333 ~~~~i~fAGd~~s~~~~g~veGA~~SG~~AA~~i~~ 368 (373)
+.++||.+||.... +...+-|...|..||..|+.
T Consensus 296 ~~~~Iya~GD~~~~--~~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 296 SMHNVWAIGDVAGE--PMLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp SSTTEEECGGGGCS--SCCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEeeccCCC--cccHHHHHHHHHHHHHHhcC
Confidence 44789999998764 45778899999999999975
Done!