BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7655
(110 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NWM0|SMOX_HUMAN Spermine oxidase OS=Homo sapiens GN=SMOX PE=1 SV=1
Length = 555
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 1 MESLTDKQVQIEVMKAFRFFLGAKYTIPEPARILTTSWGSNKHFRGSYSIRTLTTERLNT 60
ME D+ V + R F G IP+P RIL ++WGSN +FRGSYS + +
Sbjct: 436 MEKCDDEAVAEICTEMLRQFTGNP-NIPKPRRILRSAWGSNPYFRGSYSYTQVGSS--GA 492
Query: 61 SAAELGAPV----SNGMGKPVLLFAGEATSEDQYATVNGAIETGWREADRILK 109
+L P+ S+ +LF+GEAT Y+T +GA+ +G REA R+++
Sbjct: 493 DVEKLAKPLPYTESSKTAPMQVLFSGEATHRKYYSTTHGALLSGQREAARLIE 545
>sp|Q99K82|SMOX_MOUSE Spermine oxidase OS=Mus musculus GN=Smox PE=1 SV=1
Length = 555
Score = 66.2 bits (160), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 1 MESLTDKQVQIEVMKAFRFFLGAKYTIPEPARILTTSWGSNKHFRGSYSIRTLTTERLNT 60
ME D+ V + R F G IP+P RIL ++WGSN +FRGSYS + +
Sbjct: 436 MERCDDEAVAEICTEMLRQFTGNP-NIPKPRRILRSAWGSNPYFRGSYSYTQVGSS--GA 492
Query: 61 SAAELGAPV----SNGMGKPVLLFAGEATSEDQYATVNGAIETGWREADRILK 109
+L P+ S+ +LF+GEAT Y+T +GA+ +G REA R+++
Sbjct: 493 DVEKLAKPLPYTESSKTAPMQVLFSGEATHRKYYSTTHGALLSGQREAARLIE 545
>sp|Q6QHF9|PAOX_HUMAN Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Homo sapiens
GN=PAOX PE=1 SV=3
Length = 649
Score = 65.9 bits (159), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 1 MESLTDKQVQIEVMKAFRFFLGAKYTIPEPARILTTSWGSNKHFRGSYSIRTLTTERLNT 60
ME+L+D++V + + + R G +P P +L + W S + RGSYS + + +
Sbjct: 529 METLSDEEVLLCLTQVLRRVTGNP-RLPAPKSVLRSRWHSAPYTRGSYSYVAVGSTGGDL 587
Query: 61 SAAELGAPVSNGMGKPVLLFAGEATSEDQYATVNGAIETGWREADRIL 108
P + +LFAGEAT Y+T +GA+ +GWREADR+L
Sbjct: 588 DLLAQPLPADGAGAQLQILFAGEATHRTFYSTTHGALLSGWREADRLL 635
>sp|Q865R1|PAOX_BOVIN Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Bos taurus
GN=PAOX PE=1 SV=3
Length = 512
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 1 MESLTDKQVQIEVMKAFRFFLGAKYTIPEPARILTTSWGSNKHFRGSYSIRTLTTERLNT 60
ME+L+D+ V + + R G +P P +L + W S + RGSYS + +
Sbjct: 392 METLSDEDVLRSLTQVLRRVTGNP-QLPAPRSMLRSCWHSAPYTRGSYSYVAVGSS--GD 448
Query: 61 SAAELGAPV-SNGMGKPV-LLFAGEATSEDQYATVNGAIETGWREADRIL 108
L P+ S+G G + +LFAGEAT Y+T +GA+ +GWREADR++
Sbjct: 449 DMDRLAQPLPSDGKGAQLQVLFAGEATHRTFYSTTHGALLSGWREADRLM 498
>sp|Q8C0L6|PAOX_MOUSE Peroxisomal N(1)-acetyl-spermine/spermidine oxidase OS=Mus musculus
GN=Paox PE=1 SV=3
Length = 504
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 1 MESLTDKQVQIEVMKAFRFFLGAKYTIPEPARILTTSWGSNKHFRGSYSIRTL--TTERL 58
ME+L+D++V + + + R G +P + + W S + RGSYS + T + L
Sbjct: 384 METLSDEEVLLSLTQVLRRVTGNP-QLPAAKSVRRSQWHSAPYTRGSYSYVAVGSTGDDL 442
Query: 59 NTSAAELGAPVSNGMGKPV-LLFAGEATSEDQYATVNGAIETGWREADRIL 108
+ A L +G G + +LFAGEAT Y+T +GA+ +GWREADR++
Sbjct: 443 DLMAQPLP---EDGTGTQLQVLFAGEATHRTFYSTTHGALLSGWREADRLV 490
>sp|Q9SU79|PAO5_ARATH Probable polyamine oxidase 5 OS=Arabidopsis thaliana GN=PAO5 PE=2
SV=1
Length = 533
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 29/138 (21%)
Query: 1 MESLTDKQVQIEVMKAFRFFLG--AKYTIPEP---------------ARILTTSWGSNKH 43
+E LTD++++ VM G K +P ++L + WGS+
Sbjct: 390 LEKLTDEEIKDAVMTTISCLTGKEVKNDTAKPLTNGSLNDDDEAMKITKVLKSKWGSDPL 449
Query: 44 FRGSYSIRTLTTE------------RLNTSAAELGAPVSNGMGKPVLLFAGEATSEDQYA 91
FRGSYS + + ++N ++ + + ++FAGEAT Y+
Sbjct: 450 FRGSYSYVAVGSSGDDLDAMAEPLPKINKKVGQVNGHDQAKVHELQVMFAGEATHRTHYS 509
Query: 92 TVNGAIETGWREADRILK 109
T +GA +G REA+R+LK
Sbjct: 510 TTHGAYYSGLREANRLLK 527
>sp|Q9LID0|LDL2_ARATH Lysine-specific histone demethylase 1 homolog 2 OS=Arabidopsis
thaliana GN=LDL2 PE=2 SV=1
Length = 746
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 13 VMKAFRFFLGAK-YTIPEPARILTTSWGSNKHFRGSYSIRTLTTERLNTSAAE---LGAP 68
V+K R G K +P+P + + T WGS+ GSYS R+ +S + L
Sbjct: 505 VLKKLRGIYGPKGVVVPDPIQTVCTRWGSDPLSYGSYS-----HVRVGSSGVDYDILAES 559
Query: 69 VSNGMGKPVLLFAGEATSEDQYATVNGAIETGWREADRIL 108
VSN L FAGEAT+ AT++GA +G REA +IL
Sbjct: 560 VSNR-----LFFAGEATTRQHPATMHGAYLSGLREASKIL 594
>sp|P18487|A37C_DROME Protein anon-37Cs OS=Drosophila melanogaster GN=anon-37Cs PE=2 SV=3
Length = 504
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 1 MESLTDKQVQIEVMKAFRFFLGAKYTIPEPARILTTSWGSNKHFRGSYSIRTLTTERLNT 60
+E L D+++ ++ R + + + +P P +L ++W ++ + G +T
Sbjct: 392 IEKLPDEELLEQITGLLRRCV-SSHLVPYPQELLRSNWSTSACYLGGRPY--FSTNSSAR 448
Query: 61 SAAELGAPVSNGMGKPVLLFAGEATSEDQYATVNGAIETGWREADRIL 108
L AP+ G P LLFAG+ATS + T++ A +G REA RI+
Sbjct: 449 DVQRLAAPL--GEKSPGLLFAGDATSLRGFGTIDAARSSGIREAQRII 494
>sp|P31225|CBP1_CANAL Corticosteroid-binding protein OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=CBP1 PE=1 SV=2
Length = 489
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 27 IPEPARILTTSWGSNKHFRGSYSIRTLTTERLNTSAAELGAPVSN-----GMGKPVLLFA 81
IP+P + T W +N + RGSYS T N ++L +S G+ +P + FA
Sbjct: 393 IPDPINTIVTDWTTNPYIRGSYS-----TMYTNDDPSDLIISLSGDFEDLGISEPYIKFA 447
Query: 82 GEATSEDQYATVNGAIETGWREADRILK 109
GE T+ + V+GA +G AD IL+
Sbjct: 448 GEHTTSEGTGCVHGAYMSGIYAADCILE 475
>sp|O60341|KDM1A_HUMAN Lysine-specific histone demethylase 1A OS=Homo sapiens GN=KDM1A
PE=1 SV=2
Length = 852
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 1 MESLTDKQVQIEVMKAFRFFLGAKYTIPEPARILTTSWGSNKHFRGSYSI---------R 51
ME+++D + + + G+ +P+P + + W ++ RGSYS
Sbjct: 715 MENISDDVIVGRCLAILKGIFGSS-AVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDY 773
Query: 52 TLTTERLNTSAAELGAPVSNGMGKPVLLFAGEATSEDQYATVNGAIETGWREADRI 107
L + + + GAP P L FAGE T + ATV+GA+ +G REA RI
Sbjct: 774 DLMAQPITPGPSIPGAP----QPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRI 825
>sp|Q6ZQ88|KDM1A_MOUSE Lysine-specific histone demethylase 1A OS=Mus musculus GN=Kdm1a
PE=1 SV=2
Length = 853
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 1 MESLTDKQVQIEVMKAFRFFLGAKYTIPEPARILTTSWGSNKHFRGSYSI---------R 51
ME+++D + + + G+ +P+P + + W ++ RGSYS
Sbjct: 716 MENISDDVIVGRCLAILKGIFGSS-AVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDY 774
Query: 52 TLTTERLNTSAAELGAPVSNGMGKPVLLFAGEATSEDQYATVNGAIETGWREADRI 107
L + + + GAP P L FAGE T + ATV+GA+ +G REA RI
Sbjct: 775 DLMAQPITPGPSIPGAP----QPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRI 826
>sp|Q8VXV7|LDL1_ARATH Lysine-specific histone demethylase 1 homolog 1 OS=Arabidopsis
thaliana GN=LDL1 PE=1 SV=1
Length = 844
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 26 TIPEPARILTTSWGSNKHFRGSYSIRTLTTERLNTSAAELGAPVSNGMGKPVLLFAGEAT 85
+P+P + L + WG +K GSYS + S+ + ++ +G + FAGEAT
Sbjct: 628 VVPDPVQALCSRWGQDKFSYGSYSYVAVG------SSGDDYDILAESVGDGRVFFAGEAT 681
Query: 86 SEDQYATVNGAIETGWREADRILK 109
+ AT++GA +G REA IL+
Sbjct: 682 NRQYPATMHGAFLSGMREAANILR 705
>sp|O96566|A37C_DROSI Protein anon-37Cs (Fragment) OS=Drosophila simulans GN=anon-37Cs
PE=3 SV=1
Length = 501
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 27 IPEPARILTTSWGSNKHFRGSYS-IRTLTTERLNTSAAELGAPVSNGMGKPVLLFAGEAT 85
+P P +L ++W ++ + G T+ + R L AP+ G P LLFAG+AT
Sbjct: 414 VPYPQELLRSNWSTSACYLGGRPYFSTINSAR---DVQRLAAPL--GEKSPGLLFAGDAT 468
Query: 86 SEDQYATVNGAIETGWREADRIL 108
S + + T++ A +G REA RI+
Sbjct: 469 SLNGFGTIDAARSSGIREAQRII 491
>sp|Q6YYZ1|LDL2_ORYSJ Lysine-specific histone demethylase 1 homolog 2 OS=Oryza sativa
subsp. japonica GN=Os08g0143400 PE=2 SV=1
Length = 763
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Query: 26 TIPEPARILTTSWGSNKHFRGSYS-IRTLTTERLNTSAAELGAPVSNGMGKPVLLFAGEA 84
T+P+P + T WGS+ GSYS IR ++ T L V++ L FAGEA
Sbjct: 521 TVPDPIQSCCTRWGSDPLCSGSYSHIRVGSS---GTDYDILAESVNDR-----LFFAGEA 572
Query: 85 TSEDQYATVNGAIETGWREADRIL 108
T+ AT++GA+ +G REA +IL
Sbjct: 573 TNRAYPATMHGALLSGLREASKIL 596
>sp|Q9VW97|LSDA_DROME Possible lysine-specific histone demethylase 1 OS=Drosophila
melanogaster GN=Su(var)3-3 PE=1 SV=1
Length = 890
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Query: 1 MESLTDKQVQIEVMKAFRFFLGAKYTIPEPARILTTSWGSNKHFRGSYSIRTLTTERLNT 60
+ES+TD + M + G ++P+P + T W S+ RGSYS ++ + +
Sbjct: 716 VESVTDDIIIGRCMSVLKNIFG-NTSVPQPKETVVTRWRSDPWARGSYSYVSVGSSGSDY 774
Query: 61 SAAELGAPV-----SNGMGKPVLLFAGEATSEDQYATVNGAIETGWREADRI 107
L APV + G P L FAGE T + ATV+GA +G REA RI
Sbjct: 775 DL--LAAPVIPPSSKDAEGLPRLFFAGEHTIRNYPATVHGAYLSGLREAGRI 824
>sp|O96570|A37C_DROLE Protein anon-37Cs OS=Drosophila lebanonensis GN=anon-37Cs PE=3 SV=1
Length = 544
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 27 IPEPARILTTSWGSNKHFRGSYSIRTLTTERLNTSAAELGAPVSNGMGKPVLLFAGEATS 86
+P P +L ++W ++ + G + T+ + L P+ G P LLFAG+AT+
Sbjct: 458 VPYPQALLRSNWSTSACYLGGRPYFSTTSSARDVQ--RLAEPL--GDIAPTLLFAGDATA 513
Query: 87 EDQYATVNGAIETGWREADRIL 108
+ T++GA +G REA RI+
Sbjct: 514 LKGFGTIDGARTSGIREAQRII 535
>sp|O64411|PAO_MAIZE Polyamine oxidase OS=Zea mays GN=PAO PE=1 SV=1
Length = 500
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 1 MESLTDKQVQIEVMKAFRFFLGAKYTIPEPARILTTSWGSNKHFRGSYSIRTLTTERLNT 60
+E +D+Q + E+M+ R K +P+ IL W S++ ++G++S + R
Sbjct: 385 IEQQSDEQTKAEIMQVLRKMFPGK-DVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEY 443
Query: 61 SAAELGAPVSNGMGKPVLLFAGEATSEDQYATVNGAIETGWREADRIL 108
+L APV + F GE TSE V+GA +G A+ ++
Sbjct: 444 D--QLRAPVGR------VYFTGEHTSEHYNGYVHGAYLSGIDSAEILI 483
>sp|Q6Z690|LDL1_ORYSJ Lysine-specific histone demethylase 1 homolog 1 OS=Oryza sativa
subsp. japonica GN=Os02g0755200 PE=2 SV=1
Length = 849
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 12 EVMKAFRFFLGAK-YTIPEPARILTTSWGSNKHFRGSYSIRTLTTERLNTSAAELGAPVS 70
+V++ R K +P+P + + T WG++K GSYS + + + L V
Sbjct: 623 KVLETLRKIFSPKGIEVPKPLQAICTRWGTDKFTYGSYSYVAIGSSGDDYDI--LAESVC 680
Query: 71 NGMGKPVLLFAGEATSEDQYATVNGAIETGWREADRILKG 110
+ + FAGEAT+ AT++GA+ +G+REA I++
Sbjct: 681 DR-----VFFAGEATNRRYPATMHGALLSGYREAANIVRA 715
>sp|Q8CIG3|KDM1B_MOUSE Lysine-specific histone demethylase 1B OS=Mus musculus GN=Kdm1b
PE=1 SV=1
Length = 826
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 1 MESLTDKQVQIEVMKAFRFFLGAKYTIPEPARILTTSWGSNKHFRGSYS-IRTLTT-ERL 58
+ ++ DKQV + M R + IPEP + T W + + +YS ++T + E
Sbjct: 725 LRTMDDKQVLQQCMGILRELFKEQ-EIPEPTKYFVTRWSTEPWIQMAYSFVKTFGSGEAY 783
Query: 59 NTSAAELGAPVSNGMGKPVLLFAGEATSEDQYATVNGAIETGWREADRI 107
+ A E+ V FAGEAT+ TV GA +G REA +I
Sbjct: 784 DIIAEEIQGTV---------FFAGEATNRHFPQTVTGAYLSGVREASKI 823
>sp|Q9FNA2|PAO1_ARATH Polyamine oxidase 1 OS=Arabidopsis thaliana GN=PAO1 PE=1 SV=1
Length = 472
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 1 MESLTDKQVQIEVMKAFRFFLGAKYTIPEPARILTTSWGSNKHFRGSYSIRTLTTERLNT 60
+E+ +D++ E M R GA TIP IL W +N+ RGSYS + ++ N
Sbjct: 333 VEAQSDQETMKEAMSVLRDMFGA--TIPYATDILVPRWWNNRFQRGSYSNYPMISD--NQ 388
Query: 61 SAAELGAPVSNGMGKPVLLFAGEATSEDQYATVNGAIETGWREADRILK 109
+ APV + F GE TSE V+G G + +L+
Sbjct: 389 LLQNIKAPVGR------IFFTGEHTSEKFSGYVHGGYLAGIDTSKSLLE 431
>sp|Q9CAE3|LDL3_ARATH Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis
thaliana GN=FLD PE=1 SV=1
Length = 789
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 12/82 (14%)
Query: 26 TIPEPARILTTSWGSNKHFRGSYSIRTLTTERLNTSAAELGAP---VSNGMGKPVLLFAG 82
+P+P + + T WG + GSYS N + G ++ +G L FAG
Sbjct: 544 NVPDPLQTVCTRWGGDPFSLGSYS---------NVAVGASGDDYDILAESVGDGRLFFAG 594
Query: 83 EATSEDQYATVNGAIETGWREA 104
EAT+ AT++GA TG REA
Sbjct: 595 EATTRRYPATMHGAFVTGLREA 616
>sp|Q8NB78|KDM1B_HUMAN Lysine-specific histone demethylase 1B OS=Homo sapiens GN=KDM1B
PE=1 SV=3
Length = 822
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 12/109 (11%)
Query: 1 MESLTDKQVQIEVMKAFRFFLGAKYTIPEPARILTTSWGSNKHFRGSYSIRTL--TTERL 58
+ +L DKQV + M R + +P+P + T W ++ + +YS + E
Sbjct: 721 VRTLDDKQVLQQCMATLRELFKEQ-EVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAY 779
Query: 59 NTSAAELGAPVSNGMGKPVLLFAGEATSEDQYATVNGAIETGWREADRI 107
+ A ++ V FAGEAT+ TV GA +G REA +I
Sbjct: 780 DIIAEDIQGTV---------FFAGEATNRHFPQTVTGAYLSGVREASKI 819
>sp|Q7XUR2|LDL3_ORYSJ Lysine-specific histone demethylase 1 homolog 3 OS=Oryza sativa
subsp. japonica GN=Os04g0560300 PE=2 SV=2
Length = 811
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 27 IPEPARILTTSWGSNKHFRGSYSIRTLTTERLNTSAAELGAPVSNGMGKPVLLFAGEATS 86
+P+P + + T WG++ GSYS + + ++ +G L FAGEAT+
Sbjct: 559 VPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDI------LAESVGDGRLFFAGEATT 612
Query: 87 EDQYATVNGAIETGWREADRI 107
AT++GA +G REA I
Sbjct: 613 RRYPATMHGAFISGLREAANI 633
>sp|Q01H90|LDL3_ORYSI Lysine-specific histone demethylase 1 homolog 3 OS=Oryza sativa
subsp. indica GN=B0103C08-B0602B01.13 PE=2 SV=1
Length = 811
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 27 IPEPARILTTSWGSNKHFRGSYSIRTLTTERLNTSAAELGAPVSNGMGKPVLLFAGEATS 86
+P+P + + T WG++ GSYS + + ++ +G L FAGEAT+
Sbjct: 559 VPDPLQSVCTRWGTDSFSLGSYSHVAVGASGDDYDI------LAESVGDGRLFFAGEATT 612
Query: 87 EDQYATVNGAIETGWREADRI 107
AT++GA +G REA I
Sbjct: 613 RRYPATMHGAFISGLREAANI 633
>sp|Q9SKX5|PAO2_ARATH Probable polyamine oxidase 2 OS=Arabidopsis thaliana GN=PAO2 PE=2
SV=1
Length = 490
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 30 PARILTTSWGSNKHFRGSYSIRTLTTERLNTSAAELGAPVSNGMGKPVLLFAGEATSEDQ 89
P + L + WGS+ + GSYS + + + L PV N L FAGEATS
Sbjct: 388 PVQYLVSRWGSDVNSMGSYSYDIVG--KPHDLYERLRVPVDN------LFFAGEATSSSF 439
Query: 90 YATVNGAIETGWREAD 105
+V+GA TG A+
Sbjct: 440 PGSVHGAYSTGLMAAE 455
>sp|Q9LYT1|PAO3_ARATH Polyamine oxidase 3 OS=Arabidopsis thaliana GN=PAO3 PE=1 SV=1
Length = 488
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 30 PARILTTSWGSNKHFRGSYSIRTLTTERLNTSAAELGAPVSNGMGKPVLLFAGEATSEDQ 89
P L + WGS+ + GSYS + + + L P+ N L FAGEATS
Sbjct: 389 PINYLVSRWGSDINSLGSYSYDIVN--KPHDLYERLRVPLDN------LFFAGEATSSSY 440
Query: 90 YATVNGAIETG 100
+V+GA TG
Sbjct: 441 PGSVHGAYSTG 451
>sp|Q8H191|PAO4_ARATH Probable polyamine oxidase 4 OS=Arabidopsis thaliana GN=PAO4 PE=1
SV=1
Length = 497
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 15/102 (14%)
Query: 1 MESLTDKQVQIEVMKAFR-FFLGAKYTIPEPARILTTSWGSNKHFRGSYSIRTL-TTERL 58
+E L+D+ VM + F A P+PA+ L T WG++ + G Y+ + E L
Sbjct: 364 LEKLSDEATANFVMLQLKKMFPDA----PDPAQYLVTRWGTDPNTLGCYAYDVVGMPEDL 419
Query: 59 NTSAAELGAPVSNGMGKPVLLFAGEATSEDQYATVNGAIETG 100
LG PV N + F GEA + + + +GA G
Sbjct: 420 ---YPRLGEPVDN------IFFGGEAVNVEHQGSAHGAFLAG 452
>sp|P50264|FMS1_YEAST Polyamine oxidase FMS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=FMS1 PE=1 SV=1
Length = 508
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 28 PEPARILTTSWGSNKHFRGSYSIRTLTTERLNTSAAELGAPVSNGMGKPVLLFAGEATSE 87
P I+ ++W + + RG+YS + ++ A +SNG + FAGE T
Sbjct: 430 PVLRNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVA-----MSNGQDSRIR-FAGEHTIM 483
Query: 88 DQYATVNGAIETGWREADRI 107
D GA E+G REA RI
Sbjct: 484 DGAGCAYGAWESGRREATRI 503
>sp|Q82XV4|RLMN_NITEU Dual-specificity RNA methyltransferase RlmN OS=Nitrosomonas
europaea (strain ATCC 19718 / NBRC 14298) GN=rlmN PE=3
SV=2
Length = 379
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 31 ARILTTSWGSNKHFR-GSYSIRTLTTERLNTSAAELGAPVSN----GMGKPVLLFAGEAT 85
A I+ W +N+ GS+ L T R+ T E PV+N GMG+P+ F T
Sbjct: 131 AEIIGQLWWANRLLEAGSHDPFPLDTTRVQTDKPETRRPVTNVVMMGMGEPLANFENLVT 190
Query: 86 SED 88
+ D
Sbjct: 191 ALD 193
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,205,065
Number of Sequences: 539616
Number of extensions: 1391314
Number of successful extensions: 3322
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 3276
Number of HSP's gapped (non-prelim): 33
length of query: 110
length of database: 191,569,459
effective HSP length: 78
effective length of query: 32
effective length of database: 149,479,411
effective search space: 4783341152
effective search space used: 4783341152
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)