RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7658
(114 letters)
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken
(Gallus gallus), Va isoform [TaxId: 9031]}
Length = 730
Score = 141 bits (357), Expect = 3e-41
Identities = 50/112 (44%), Positives = 75/112 (66%), Gaps = 2/112 (1%)
Query: 3 DMYGLDMVKKYEGQILGTLSPHLFAIGSAAYSALATSG-NQVVVISGESGSGKTECTKLV 61
+YG D++ Y GQ +G + PH+FA+ AY +A NQ +++SGESG+GKT K
Sbjct: 55 PIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYA 114
Query: 62 MQYLAAV-NKSPSNLITEQILEASPLLESFGNAKTVRNDNSSRFGKFLQVHF 112
M+Y A V + + E++L ++P++ES GNAKT RNDNSSRFGK++++ F
Sbjct: 115 MRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGF 166
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain
{Dictyostelium discoideum [TaxId: 44689]}
Length = 712
Score = 141 bits (356), Expect = 4e-41
Identities = 55/117 (47%), Positives = 82/117 (70%), Gaps = 5/117 (4%)
Query: 3 DMYGLDMVKKYEGQILGTLSPHLFAIGSAAYSALATSG-NQVVVISGESGSGKTECTKLV 61
+Y +MV ++G+ ++PH+FAI AY ++ NQ ++I+GESG+GKTE TK V
Sbjct: 86 PIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKV 145
Query: 62 MQYLAAVNKSP----SNLITEQILEASPLLESFGNAKTVRNDNSSRFGKFLQVHFKE 114
+QYLA+V S ++ +QIL+A+P+LE+FGNAKT RN+NSSRFGKF+++ F
Sbjct: 146 IQYLASVAGRNQANGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNN 202
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay
scallop (Aequipecten irradians) [TaxId: 31199]}
Length = 789
Score = 140 bits (353), Expect = 1e-40
Identities = 52/124 (41%), Positives = 77/124 (62%), Gaps = 12/124 (9%)
Query: 3 DMYGLDMVKKYEGQILGTLSPHLFAIGSAAYSALATSG-NQVVVISGESGSGKTECTKLV 61
+Y ++ KY G+ + PHLF++ AY + T NQ +I+GESG+GKTE TK V
Sbjct: 82 PIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKV 141
Query: 62 MQYLAAVNKSPSNL-----------ITEQILEASPLLESFGNAKTVRNDNSSRFGKFLQV 110
+ YLA V + + +QI++A+P+LE++GNAKT RN+NSSRFGKF+++
Sbjct: 142 IMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRI 201
Query: 111 HFKE 114
HF
Sbjct: 202 HFGP 205
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 794
Score = 139 bits (350), Expect = 3e-40
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 12/124 (9%)
Query: 3 DMYGLDMVKKYEGQILGTLSPHLFAIGSAAYSALATSG-NQVVVISGESGSGKTECTKLV 61
+Y +V Y G+ PH+F+I AY + T NQ ++I+GESG+GKT TK V
Sbjct: 84 PVYNPKVVLAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRV 143
Query: 62 MQYLAAVNKSP-----------SNLITEQILEASPLLESFGNAKTVRNDNSSRFGKFLQV 110
+QY A + S + +QI+ A+PLLE+FGNAKTVRNDNSSRFGKF+++
Sbjct: 144 IQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFGNAKTVRNDNSSRFGKFIRI 203
Query: 111 HFKE 114
HF
Sbjct: 204 HFGA 207
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 710
Score = 137 bits (345), Expect = 1e-39
Identities = 51/128 (39%), Positives = 79/128 (61%), Gaps = 16/128 (12%)
Query: 3 DMYGLDMVKKYEGQILGTLSPHLFAIGSAAYSALATSG-NQVVVISGESGSGKTECTKLV 61
+Y ++ Y+G+ + PH++AI AY ++ +Q ++ +GESG+GKTE TK V
Sbjct: 52 PIYSEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKV 111
Query: 62 MQYLAAVNKSP---------------SNLITEQILEASPLLESFGNAKTVRNDNSSRFGK 106
+QYLA V S + +Q+L+A+P+LE+FGNAKTV+NDNSSRFGK
Sbjct: 112 IQYLAVVASSHKGKKDTSITQGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGK 171
Query: 107 FLQVHFKE 114
F++++F
Sbjct: 172 FIRINFDV 179
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium
discoideum, class-I myosin MyoE [TaxId: 44689]}
Length = 684
Score = 136 bits (343), Expect = 3e-39
Identities = 52/114 (45%), Positives = 82/114 (71%), Gaps = 4/114 (3%)
Query: 3 DMYGLDMVKKYEGQILGTLSPHLFAIGSAAYSALATSG-NQVVVISGESGSGKTECTKLV 61
++Y +K Y G+ + PH++A+ + AY ++ S NQ V+ISGESG+GKTE +K +
Sbjct: 47 NIYKESDIKAYNGRYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKI 106
Query: 62 MQYLAAVNKSPS---NLITEQILEASPLLESFGNAKTVRNDNSSRFGKFLQVHF 112
MQ+L V+ + S I++ +L+++PLLE+FGNAKT+RNDNSSRFGK++++ F
Sbjct: 107 MQFLTFVSSNQSPNGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQF 160
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus
type 2 [TaxId: 11060]}
Length = 305
Score = 36.8 bits (84), Expect = 2e-04
Identities = 8/49 (16%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
Query: 41 NQVVVISGESGSGKTECTKLVMQYLAAVNK------SPSNLITEQILEA 83
++ ++ G+GKT+ + A +P+ ++ ++ EA
Sbjct: 9 KRLTIMDLHPGAGKTKRYLPAIVREAIKRGLRTLILAPTRVVAAEMEEA 57
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 34.7 bits (78), Expect = 0.001
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 35 ALATSGNQVVVISGESGSGKTECTKLVMQYLAAVNKSP 72
A+ T+G V+ I G S SGKT + Q L S
Sbjct: 16 AIKTAGRLVLGIDGLSRSGKTTLANQLSQTLREQGISV 53
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 33.8 bits (76), Expect = 0.002
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 41 NQVVVISGESGSGKTECTKLVMQYLAAVNKSP 72
N+VVV++G G G T ++L M L +
Sbjct: 1 NKVVVVTGVPGVGSTTSSQLAMDNLRKEGVNY 32
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54
(NtrC1), C-terminal domain {Aquifex aeolicus [TaxId:
63363]}
Length = 247
Score = 33.7 bits (77), Expect = 0.002
Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Query: 44 VVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQILEASPLLESFGNAKTVRND-NSS 102
V+I+GESG GK +L+ + + L I E FG K SS
Sbjct: 26 VLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYEKGAFTGAVSS 85
Query: 103 RFGKFLQVH 111
+ G F
Sbjct: 86 KEGFFELAD 94
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human
hepatitis C virus (HCV), different isolates [TaxId:
11103]}
Length = 136
Score = 32.5 bits (73), Expect = 0.004
Identities = 11/47 (23%), Positives = 16/47 (34%), Gaps = 8/47 (17%)
Query: 41 NQVVVISGESGSGKTECTKLVMQYLA-----AVNKSPSNLITEQILE 82
QV + +GSGK+ V A + +PS T
Sbjct: 8 FQVAHLHAPTGSGKST---KVPAAYAAQGYKVLVLNPSVAATLGFGA 51
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 31.5 bits (70), Expect = 0.014
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 42 QVVVISGESGSGKTECTKLVMQYLAAVNKSPS 73
+VVV+SG S GK+ + + + + ++ S S
Sbjct: 3 RVVVLSGPSAVGKSTVVRCLRERIPNLHFSVS 34
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever
virus [TaxId: 11089]}
Length = 140
Score = 31.2 bits (69), Expect = 0.015
Identities = 5/16 (31%), Positives = 7/16 (43%)
Query: 41 NQVVVISGESGSGKTE 56
V+ G+GKT
Sbjct: 7 GMTTVLDFHPGAGKTR 22
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 31.2 bits (69), Expect = 0.016
Identities = 11/40 (27%), Positives = 16/40 (40%)
Query: 41 NQVVVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQI 80
+ + V+ G SGSGK+ V L A L +
Sbjct: 6 HHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRN 45
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 31.1 bits (69), Expect = 0.016
Identities = 5/25 (20%), Positives = 15/25 (60%)
Query: 41 NQVVVISGESGSGKTECTKLVMQYL 65
++++++G S +GK+ + + L
Sbjct: 3 TRMIILNGGSSAGKSGIVRCLQSVL 27
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 30.8 bits (68), Expect = 0.022
Identities = 8/45 (17%), Positives = 19/45 (42%)
Query: 41 NQVVVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQILEASP 85
++ +I+G +G GK+ K + L ++I ++
Sbjct: 2 KKLYIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVGGYR 46
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 30.3 bits (67), Expect = 0.029
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 44 VVISGESGSGKTECTKLVMQYLA 66
++I+GE G GKT K +++ L
Sbjct: 3 IIITGEPGVGKTTLVKKIVERLG 25
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 30.3 bits (67), Expect = 0.036
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 34 SALATSGNQVVVISGESGSGKTECTKLVMQYLAAVNKS 71
+A + + ++++ G+ G GKT + LA +
Sbjct: 13 DDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFD 50
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 29.9 bits (66), Expect = 0.042
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 40 GNQVVVISGESGSGKTECTKLVMQYL 65
G ++++SG GSGK+ + +
Sbjct: 3 GGNILLLSGHPGSGKSTIAEALANLP 28
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 29.9 bits (66), Expect = 0.046
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 43 VVVISGESGSGKTECTKLVMQYLAA 67
++ +SG + SGK+ ++Q L
Sbjct: 4 LIGVSGGTASGKSSVCAKIVQLLGQ 28
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 29.8 bits (66), Expect = 0.047
Identities = 15/92 (16%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Query: 21 LSPHLFAIGSAAYSALATSGNQVVVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQI 80
++ H A+ + + L + ++G S SGK+ + L + + +
Sbjct: 4 ITFHASALTRSERTELRNQRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDN 63
Query: 81 LEASPLLESFGNAKTVRNDNSSRFGKFLQVHF 112
+ L + G ++ RN+N R + ++
Sbjct: 64 IRFG-LNKDLGFSEADRNENIRRIAEVAKLFA 94
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 30.1 bits (66), Expect = 0.050
Identities = 8/48 (16%), Positives = 15/48 (31%)
Query: 26 FAIGSAAYSALATSGNQVVVISGESGSGKTECTKLVMQYLAAVNKSPS 73
+ A + N + G G GKT K ++ ++
Sbjct: 31 IYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEG 78
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 29.6 bits (66), Expect = 0.052
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 41 NQVVVISGESGSGKTECTKLVM 62
+ VI G +G+GKT +L+
Sbjct: 26 GEYFVILGPTGAGKTLFLELIA 47
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895
{Pyrococcus furiosus [TaxId: 2261]}
Length = 200
Score = 29.5 bits (66), Expect = 0.063
Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 13/58 (22%)
Query: 8 DMVKKYEGQILGTLSPHLFAIGSAAYSALATSGNQVVVISGESGSGKTECTKLVMQYL 65
D+ Y+ +L ++ I VV G +G GKT K + YL
Sbjct: 7 DLSVGYDKPVLERIT---MTIEK----------GNVVNFHGPNGIGKTTLLKTISTYL 51
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 29.5 bits (65), Expect = 0.065
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 44 VVISGESGSGKTECTKLVMQ 63
VV+SG SG+GK+ K + Q
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQ 22
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import
ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 240
Score = 29.6 bits (66), Expect = 0.069
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 40 GNQVVVISGESGSGKTECTKLVM 62
G V+ G +G+GK+ +L+
Sbjct: 23 GRDYCVLLGPTGAGKSVFLELIA 45
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 29.6 bits (65), Expect = 0.072
Identities = 10/54 (18%), Positives = 23/54 (42%)
Query: 40 GNQVVVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQILEASPLLESFGNA 93
G + + I G GK+ KL+ + + + + T Q ++A+ ++
Sbjct: 1 GPRRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGNQKACTAQ 54
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 29.1 bits (65), Expect = 0.079
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 41 NQVVVISGESGSGKTECTKLVM 62
+ +++ G SG GKT +++
Sbjct: 29 GEFMILLGPSGCGKTTTLRMIA 50
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 29.0 bits (65), Expect = 0.087
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 41 NQVVVISGESGSGKTECTKLVM 62
V+ I G SGSGK+ + +
Sbjct: 28 GDVISIIGSSGSGKSTFLRCIN 49
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 29.3 bits (64), Expect = 0.096
Identities = 6/32 (18%), Positives = 13/32 (40%)
Query: 34 SALATSGNQVVVISGESGSGKTECTKLVMQYL 65
L + ++ G +GK+ K+ + L
Sbjct: 22 EKLKGLRAPITLVLGLRRTGKSSIIKIGINEL 53
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 29.1 bits (65), Expect = 0.099
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 41 NQVVVISGESGSGKTECTKLVMQYLAAVNKS 71
+V+ I G SGSGK+ TKL+ ++ N
Sbjct: 29 GEVIGIVGRSGSGKSTLTKLIQRFYIPENGQ 59
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 28.9 bits (64), Expect = 0.10
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 41 NQVVVISGESGSGKTECTKLVM 62
+ I G SG+GKT +++
Sbjct: 31 GERFGILGPSGAGKTTFMRIIA 52
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 28.7 bits (64), Expect = 0.10
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 40 GNQVVVISGESGSGKTECTKLVMQ 63
V+I+G+SG GK+E ++Q
Sbjct: 13 YGLGVLITGDSGVGKSETALELVQ 36
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 28.8 bits (64), Expect = 0.10
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 40 GNQVVVISGESGSGKTECT 58
V+++G SG GK+EC
Sbjct: 14 FGVGVLLTGRSGIGKSECA 32
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 28.8 bits (64), Expect = 0.11
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 41 NQVVVISGESGSGKTECTKLVM 62
+ VV G SG GK+ +++
Sbjct: 26 GEFVVFVGPSGCGKSTLLRMIA 47
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 29.0 bits (63), Expect = 0.11
Identities = 7/43 (16%), Positives = 15/43 (34%), Gaps = 2/43 (4%)
Query: 27 AIGSAAYSALATSGN--QVVVISGESGSGKTECTKLVMQYLAA 67
+ + L G+ + G G+GKT + + +
Sbjct: 27 QLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKD 69
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 28.8 bits (63), Expect = 0.12
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 43 VVVISGESGSGKTECTKLVMQYLAAVNKSP 72
++V+ G GKT +K + +YL +
Sbjct: 4 LIVMVGLPARGKTYISKKLTRYLNFIGVPT 33
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 28.8 bits (63), Expect = 0.13
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 44 VVISGESGSGKTECTKLVMQ 63
+VISG SG+GK+ K +
Sbjct: 4 IVISGPSGTGKSTLLKKLFA 23
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 28.8 bits (63), Expect = 0.13
Identities = 6/35 (17%), Positives = 14/35 (40%)
Query: 43 VVVISGESGSGKTECTKLVMQYLAAVNKSPSNLIT 77
+ +++G G GK+ V + L + +
Sbjct: 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINY 37
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 28.4 bits (62), Expect = 0.13
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 43 VVVISGESGSGKTECTKLVMQYLAAVN 69
V+I G GSGKT +Y +
Sbjct: 11 TVLIEGNIGSGKTTYLNHFEKYKNDIC 37
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 28.8 bits (63), Expect = 0.14
Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 42 QVVVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQILEASP 85
+ ++SG SG+GKT +Q+L E +P
Sbjct: 27 RSTLVSGTSGTGKTL---FSIQFLYNGIIEFDEPGVFVTFEETP 67
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 28.7 bits (64), Expect = 0.14
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 41 NQVVVISGESGSGKTECTKLVM 62
N ++ +G SG GK+ L+
Sbjct: 28 NSIIAFAGPSGGGKSTIFSLLE 49
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 28.4 bits (63), Expect = 0.14
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 40 GNQVVVISGESGSGKTECT 58
V+I+G+SG GK+E
Sbjct: 14 YGVGVLITGDSGIGKSETA 32
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 28.3 bits (62), Expect = 0.15
Identities = 4/20 (20%), Positives = 9/20 (45%)
Query: 44 VVISGESGSGKTECTKLVMQ 63
+V+ G G G+ ++
Sbjct: 6 LVLLGAHGVGRRHIKNTLIT 25
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 28.3 bits (63), Expect = 0.16
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 41 NQVVVISGESGSGKTECTKLVM 62
+ V I G SGSGK+ ++
Sbjct: 31 GEFVSIMGPSGSGKSTMLNIIG 52
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 28.4 bits (63), Expect = 0.16
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 42 QVVVISGESGSGKTECTKLVM 62
V +I G +GSGK+ ++
Sbjct: 31 DVTLIIGPNGSGKSTLINVIT 51
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 28.3 bits (63), Expect = 0.17
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 41 NQVVVISGESGSGKTECTKLVM 62
Q+V + G +G+GKT +
Sbjct: 32 GQIVTLIGANGAGKTTTLSAIA 53
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 28.3 bits (62), Expect = 0.17
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 33 YSALATSGNQVVVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQIL 81
S+L + +VVV G G+GK+ + + V+ + L + Q
Sbjct: 6 SSSLLSPNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLGSWQRC 54
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 28.3 bits (62), Expect = 0.17
Identities = 5/22 (22%), Positives = 14/22 (63%)
Query: 42 QVVVISGESGSGKTECTKLVMQ 63
+ ++S SG+GK+ + +++
Sbjct: 3 TLYIVSAPSGAGKSSLIQALLK 24
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 28.4 bits (62), Expect = 0.17
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 42 QVVVISGESGSGKTECTKLVMQYLAAVNKS 71
+ V ++G G GKT + L +
Sbjct: 2 RHVFLTGPPGVGKTTLIHKASEVLKSSGVP 31
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 28.3 bits (63), Expect = 0.17
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 41 NQVVVISGESGSGKTECTKLVM 62
+V + G +GSGK+ L+
Sbjct: 40 GEVTALVGPNGSGKSTVAALLQ 61
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 28.0 bits (61), Expect = 0.19
Identities = 8/38 (21%), Positives = 20/38 (52%)
Query: 43 VVVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQI 80
V+ + G G+GK + +++ + V+ S +L+ +
Sbjct: 10 VIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQ 47
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 28.3 bits (63), Expect = 0.19
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 41 NQVVVISGESGSGKTECTKLVM 62
+++ I+G +GSGKT L++
Sbjct: 62 GEMLAITGSTGSGKTSLLMLIL 83
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 288
Score = 28.0 bits (62), Expect = 0.20
Identities = 5/30 (16%), Positives = 11/30 (36%)
Query: 43 VVVISGESGSGKTECTKLVMQYLAAVNKSP 72
++ ++G SG+G + Q
Sbjct: 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKA 35
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022,
N-terminal domain {Pyrococcus horikoshii [TaxId:
53953]}
Length = 239
Score = 28.2 bits (63), Expect = 0.21
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 41 NQVVVISGESGSGKTECTKLVM 62
+ +V+ G SG GKT +++
Sbjct: 32 GEFLVLLGPSGCGKTTTLRMIA 53
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 28.2 bits (61), Expect = 0.22
Identities = 5/31 (16%), Positives = 10/31 (32%), Gaps = 3/31 (9%)
Query: 41 NQVVVISGESGSGKTECTKLVMQYLAAVNKS 71
+ + GE +GKT+ +
Sbjct: 23 GSITEMFGEFRTGKTQ---ICHTLAVTCQLP 50
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 28.0 bits (62), Expect = 0.23
Identities = 8/52 (15%), Positives = 20/52 (38%), Gaps = 7/52 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYLAAVNKSPSNLITE-----QILEASPLLESF 90
+ + G G GK+ +++ + SP+ E + L + ++
Sbjct: 9 IYLDGVYGIGKSTTGRVMASAASG--GSPTLYFPEPMAYWRTLFETDVISGI 58
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus
influenzae [TaxId: 727]}
Length = 158
Score = 27.7 bits (61), Expect = 0.26
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 30 SAAYSALATSGNQVVVISGESGSGKTECTKLVMQYLA--AVNKSPSNLITEQILEASPLL 87
+ L T +V ++G+ G+GKT T+ ++Q + KSP+ + E+ A ++
Sbjct: 22 AEILLKLHTEKAIMVYLNGDLGAGKTTLTRGMLQGIGHQGNVKSPTYTLVEEYNIAGKMI 81
Query: 88 ESF 90
F
Sbjct: 82 YHF 84
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544
{Thermotoga maritima [TaxId: 2336]}
Length = 238
Score = 27.6 bits (61), Expect = 0.27
Identities = 5/22 (22%), Positives = 13/22 (59%)
Query: 41 NQVVVISGESGSGKTECTKLVM 62
++ + G +G+GKT +++
Sbjct: 28 GEIFGLIGPNGAGKTTTLRIIS 49
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC
transporter MsbA, C-terminal domain {Salmonella
typhimurium [TaxId: 90371]}
Length = 253
Score = 27.9 bits (62), Expect = 0.27
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 41 NQVVVISGESGSGKTECTKLVM 62
+ V + G SGSGK+ L+
Sbjct: 41 GKTVALVGRSGSGKSTIASLIT 62
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 27.8 bits (60), Expect = 0.29
Identities = 6/13 (46%), Positives = 11/13 (84%)
Query: 43 VVVISGESGSGKT 55
+ +I G++GSGK+
Sbjct: 25 INLIIGQNGSGKS 37
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 27.4 bits (61), Expect = 0.31
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 41 NQVVVISGESGSGKTECTKLVM 62
+ V G SG GK+ L+
Sbjct: 44 GETVAFVGMSGGGKSTLINLIP 65
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 27.4 bits (59), Expect = 0.34
Identities = 6/29 (20%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 41 NQVVVISGESGSGK-TECTKLVMQYLAAV 68
++++ G GSGK T + + +
Sbjct: 2 KKIILTIGCPGSGKSTWAREFIAKNPGFY 30
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 27.3 bits (59), Expect = 0.34
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 44 VVISGESGSGKTECTKLVMQYLAA 67
+ I G G+GK + + A
Sbjct: 3 IAIEGVDGAGKRTLVEKLSGAFRA 26
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 27.3 bits (59), Expect = 0.36
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 43 VVVISGESGSGKTECTKLVMQYL 65
V+ I G SG+GK K + + L
Sbjct: 5 VITIDGPSGAGKGTLCKAMAEAL 27
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 27.2 bits (60), Expect = 0.36
Identities = 4/21 (19%), Positives = 12/21 (57%)
Query: 42 QVVVISGESGSGKTECTKLVM 62
+++ + G +G+GK+ +
Sbjct: 26 EILHLVGPNGAGKSTLLARMA 46
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 27.4 bits (59), Expect = 0.37
Identities = 5/23 (21%), Positives = 10/23 (43%)
Query: 43 VVVISGESGSGKTECTKLVMQYL 65
+ ++G SGK + + L
Sbjct: 8 TIFLTGYMNSGKDAIARALQVTL 30
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 27.6 bits (59), Expect = 0.38
Identities = 10/63 (15%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 14 EGQILGTLSPHLFAIGSAAYSALATSGNQVVVISGESGSGKTECTKLVMQYLAAVNKSPS 73
++L T+S H I + + L + ++ S S + + L++ +++ S +
Sbjct: 2 HDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIV----SLDNSKA 57
Query: 74 NLI 76
Sbjct: 58 QEY 60
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 27.3 bits (59), Expect = 0.38
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 43 VVVISGESGSGKT 55
++ + SG+GKT
Sbjct: 4 LLAFAAWSGTGKT 16
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 27.3 bits (60), Expect = 0.39
Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 8/78 (10%)
Query: 43 VVVISGESGSGKTECTKLVMQYLAA--VNKSPSNLITEQILEASPLLESF------GNAK 94
V I G G GKT T+L++ + + P + ++L AS + + +
Sbjct: 6 RVYIDGPHGMGKTTTTQLLVALGSRDDIVYVPEPMTYWRVLGASETIANIYTTQHRLDQG 65
Query: 95 TVRNDNSSRFGKFLQVHF 112
+ +++ Q+
Sbjct: 66 EISAGDAAVVMTSAQITM 83
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 27.4 bits (60), Expect = 0.41
Identities = 9/66 (13%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 43 VVVISGESGSGKTECTKLVMQYLAAVNKSPSNLI--------TEQILEASPLLESFGNAK 94
++ I+G GK+ +++ L+ + + Q+L+ L++ G +
Sbjct: 82 IISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKKKGFPE 141
Query: 95 TVRNDN 100
+
Sbjct: 142 SYDMHR 147
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 27.3 bits (59), Expect = 0.42
Identities = 6/22 (27%), Positives = 8/22 (36%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
V I G SGK+ +
Sbjct: 10 VAILGGESSGKSVLVNKLAAVF 31
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 27.4 bits (59), Expect = 0.42
Identities = 8/38 (21%), Positives = 11/38 (28%)
Query: 41 NQVVVISGESGSGKTECTKLVMQYLAAVNKSPSNLITE 78
V +G GSGKT+ L +
Sbjct: 34 QSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAV 71
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 27.3 bits (59), Expect = 0.43
Identities = 6/29 (20%), Positives = 11/29 (37%)
Query: 44 VVISGESGSGKTECTKLVMQYLAAVNKSP 72
+ I G +GK+ ++ Q P
Sbjct: 5 ISIEGNIAAGKSTFVNILKQLCEDWEVVP 33
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase
(APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 27.0 bits (58), Expect = 0.47
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 43 VVVISGESGSGKTECTKLVMQYL 65
V ++G SG+GKT + + +YL
Sbjct: 21 TVWLTGLSGAGKTTVSMALEEYL 43
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 232
Score = 27.0 bits (58), Expect = 0.49
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 43 VVVISGESGSGKTECTKLVMQYLAAVNKS 71
+ V SG+ G+GKT T + LA +
Sbjct: 4 ITVASGKGGTGKTTITANLGVALAQLGHD 32
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein
TrwB {Escherichia coli [TaxId: 562]}
Length = 433
Score = 27.2 bits (59), Expect = 0.50
Identities = 4/33 (12%), Positives = 15/33 (45%)
Query: 39 SGNQVVVISGESGSGKTECTKLVMQYLAAVNKS 71
+ + ++++G +G+GK+ + +
Sbjct: 48 AEPRHLLVNGATGTGKSVLLRELAYTGLLRGDR 80
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 26.9 bits (58), Expect = 0.54
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 42 QVVVISGESGSGKTECTKLVMQYLAAVNKSPSNLI 76
VV + G GSGK +++ V+ S +L+
Sbjct: 7 NVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLL 41
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 26.9 bits (58), Expect = 0.56
Identities = 7/27 (25%), Positives = 12/27 (44%), Gaps = 3/27 (11%)
Query: 42 QVVVISGESGSGKTECTKLVMQYLAAV 68
V + G+GK+ L +Q A +
Sbjct: 30 TVGALVSPGGAGKSM---LALQLAAQI 53
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli
[TaxId: 562]}
Length = 210
Score = 26.8 bits (58), Expect = 0.56
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 44 VVISGESGSGKTECTKLVMQYLAAVNKSPSNLITE 78
+VI G G+GKT +V++ L + E
Sbjct: 5 IVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTRE 39
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 26.8 bits (59), Expect = 0.62
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 41 NQVVVISGESGSGKTECTKLVM 62
Q+ + G SG+GK+ + V
Sbjct: 31 GQIYGVIGASGAGKSTLIRCVN 52
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 26.7 bits (57), Expect = 0.68
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 40 GNQVVVISGESGSGKT 55
+ +I G++GSGK+
Sbjct: 22 KEGINLIIGQNGSGKS 37
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 26.4 bits (57), Expect = 0.72
Identities = 7/29 (24%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 42 QVVVISGESGSGKTECTKLVMQYLAAVNK 70
+++ +G +G+GKT LV +++
Sbjct: 27 SIILATGATGTGKTL---LVSRFVENACA 52
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 26.5 bits (58), Expect = 0.78
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 44 VVISGESGSGKTECTKLVMQYLAA 67
+ + G G GKT + + + A
Sbjct: 8 IYLDGAYGIGKTTAAEEFLHHFAI 31
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme
UvrB {Bacillus caldotenax [TaxId: 1395]}
Length = 413
Score = 26.3 bits (57), Expect = 0.86
Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 7/61 (11%)
Query: 39 SGNQVVVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQILEASPL---LESFGNAKT 95
G + + G +G+GKT + + A P+ +I A L L+ F
Sbjct: 29 RGVKHQTLLGATGTGKT----FTISNVIAQVNKPTLVIAHNKTLAGQLYSELKEFFPHNA 84
Query: 96 V 96
V
Sbjct: 85 V 85
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase
PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Length = 200
Score = 26.3 bits (56), Expect = 0.90
Identities = 7/45 (15%), Positives = 14/45 (31%)
Query: 35 ALATSGNQVVVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQ 79
A +I +G GKT ++ +Y ++
Sbjct: 17 IYAKCKETNCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAPT 61
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 26.1 bits (56), Expect = 0.90
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 44 VVISGESGSGKTECTKLVMQYLAA 67
+V+ G +GK+ ++ +++ L A
Sbjct: 6 IVLEGVDRAGKSTQSRKLVEALCA 29
>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st
ketoreductase module {Saccharopolyspora erythraea
[TaxId: 1836]}
Length = 259
Score = 26.1 bits (56), Expect = 1.0
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 28 IGSAAYSALATSGNQVVVISGESGSGKTECTKLV 61
+G LA G +++ SG +LV
Sbjct: 21 VGGQIARWLARRGAPHLLLVSRSGPDADGAGELV 54
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 26.0 bits (56), Expect = 1.1
Identities = 6/14 (42%), Positives = 7/14 (50%)
Query: 42 QVVVISGESGSGKT 55
V + G SGKT
Sbjct: 2 NVWQVVGYKHSGKT 15
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 251
Score = 25.8 bits (55), Expect = 1.1
Identities = 4/15 (26%), Positives = 8/15 (53%)
Query: 41 NQVVVISGESGSGKT 55
+ + GE +GK+
Sbjct: 34 GSITELFGEFRTGKS 48
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 26.0 bits (56), Expect = 1.1
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 44 VVISGESGSGKTECTKLVMQYLAA 67
++I G +GKT ++ + L
Sbjct: 6 ILIEGLDRTGKTTQCNILYKKLQP 29
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 25.9 bits (56), Expect = 1.2
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 43 VVVISGESGSGKTECTKLVMQYL 65
+ SG GSGK+ + + +L
Sbjct: 29 FIFFSGPQGSGKSFTSIQIYNHL 51
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic
domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 254
Score = 25.8 bits (55), Expect = 1.2
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 41 NQVVVISGESGSGKT 55
+ + GE GSGKT
Sbjct: 36 QAITEVFGEFGSGKT 50
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 25.8 bits (55), Expect = 1.3
Identities = 10/30 (33%), Positives = 19/30 (63%), Gaps = 7/30 (23%)
Query: 40 GNQV----VVISGESGSGKTECTKLVMQYL 65
GN++ +V+ GES GK+ LV++++
Sbjct: 1 GNKICQFKLVLLGESAVGKSS---LVLRFV 27
>d2vgba3 c.49.1.1 (A:440-573) Pyruvate kinase, C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 134
Score = 25.3 bits (55), Expect = 1.4
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 26 FAIGSAAYSALATSGNQVVVISGE-SGSGKTECTKLV 61
F I S G+ V+V++G GSG T +++
Sbjct: 96 FGIESGKLRGFLRVGDLVIVVTGWRPGSGYTNIMRVL 132
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae
[TaxId: 1313]}
Length = 223
Score = 25.7 bits (55), Expect = 1.4
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 43 VVVISGESGSGKTECTKLVMQYL 65
+ I G + SGK+ K++ +
Sbjct: 5 QIAIDGPASSGKSTVAKIIAKDF 27
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme
UvrB {Thermus thermophilus [TaxId: 274]}
Length = 408
Score = 25.6 bits (55), Expect = 1.4
Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 39 SGNQVVVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQILEASPLLESF 90
G + V + G +G+GKT + M + P+ ++ + A+ L F
Sbjct: 26 DGERFVTLLGATGTGKT----VTMAKVIEALGRPALVLAPNKILAAQLAAEF 73
>d1wlga_ b.152.1.1 (A:) Flagellar hook protein flgE {Salmonella
typhimurium [TaxId: 90371]}
Length = 293
Score = 25.6 bits (55), Expect = 1.5
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 25 LFAIGSAAYSALATSGNQVVVISGESGSGK 54
L + G ++A SG ++ +G GK
Sbjct: 255 LASQGDNVWAATQASGVALLGTAGSGNFGK 284
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 25.6 bits (55), Expect = 1.6
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 43 VVVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQ 79
V+ISG SGK +L+ + S +L+ +
Sbjct: 5 KVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAE 41
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 25.3 bits (54), Expect = 1.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 43 VVVISGESGSGKTECTKLVMQYLAAVNK 70
+VV G +GSGKT T +YL K
Sbjct: 2 IVVFVGTAGSGKTTLTGEFGRYLEDNYK 29
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania
major [TaxId: 5664]}
Length = 174
Score = 25.4 bits (54), Expect = 1.8
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
++I+G G+GKT +++ L
Sbjct: 8 ILITGTPGTGKTSMAEMIAAEL 29
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 253
Score = 25.5 bits (54), Expect = 1.8
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 42 QVVVISGESGSGKTECTKLVMQYL 65
+ ++ G G GKT LV Q L
Sbjct: 53 RAAMLYGPPGIGKTTAAHLVAQEL 76
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 25.1 bits (53), Expect = 1.9
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+ + G G+GK+ + + Q L
Sbjct: 5 IFLVGPMGAGKSTIGRQLAQQL 26
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia
coli [TaxId: 562]}
Length = 222
Score = 25.4 bits (54), Expect = 1.9
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 40 GNQVVVISGESGSGKT 55
V +SG +G+GK+
Sbjct: 23 DELVTTLSGGNGAGKS 38
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 25.0 bits (53), Expect = 1.9
Identities = 7/22 (31%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+V+ G G GK + L +Q++
Sbjct: 9 LVVVGGGGVGK---SALTIQFI 27
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain
(RecD) {Escherichia coli [TaxId: 562]}
Length = 359
Score = 25.2 bits (54), Expect = 2.1
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 9/77 (11%)
Query: 16 QILGTLSPHLFAIGSAAYSALATSGNQVVVISGESGSGKTECTKLVMQYLAAVNK----- 70
Q L L P I +A ++ VISG G+GKT ++ L +
Sbjct: 138 QTLDKLFPVSDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCR 197
Query: 71 ----SPSNLITEQILEA 83
+P+ ++ E+
Sbjct: 198 IRLAAPTGKAAARLTES 214
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15
homolog {Human (Homo sapiens) [TaxId: 9606]}
Length = 258
Score = 25.1 bits (53), Expect = 2.1
Identities = 5/15 (33%), Positives = 7/15 (46%)
Query: 41 NQVVVISGESGSGKT 55
+ GE +GKT
Sbjct: 37 MAITEAFGEFRTGKT 51
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 24.9 bits (53), Expect = 2.2
Identities = 6/22 (27%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+ + G++ SGK + L+ ++L
Sbjct: 8 LGVLGDARSGK---SSLIHRFL 26
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 237
Score = 25.0 bits (53), Expect = 2.2
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 40 GNQVVVISGESGSGKTECTKLVMQYLAAVNKS 71
G + ++SG+ G+GKT T + L +
Sbjct: 2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRK 33
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top
tamarin (Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 24.9 bits (53), Expect = 2.3
Identities = 7/22 (31%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
V++ G G GK+ L +Q++
Sbjct: 7 VIMVGSGGVGKSA---LTLQFM 25
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 24.9 bits (53), Expect = 2.4
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 43 VVVISGESGSGKTECTKLVMQYLAAV 68
++ I+G GSGK+ L+ + V
Sbjct: 5 IIGITGNIGSGKSTVAALLRSWGYPV 30
>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 339
Score = 25.0 bits (53), Expect = 2.4
Identities = 14/63 (22%), Positives = 22/63 (34%)
Query: 28 IGSAAYSALATSGNQVVVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQILEASPLL 87
GS L G +V + S + T+ + VNK+ L + +AS L
Sbjct: 13 DGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLR 72
Query: 88 ESF 90
Sbjct: 73 RWI 75
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 25.0 bits (53), Expect = 2.4
Identities = 7/22 (31%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+V+ G+S GK T L+ +
Sbjct: 5 IVVVGDSQCGK---TALLHVFA 23
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 25.0 bits (53), Expect = 2.6
Identities = 7/22 (31%), Positives = 11/22 (50%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+VI G+ GK T L++
Sbjct: 5 LVIVGDGACGK---TCLLIVNS 23
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 24.6 bits (52), Expect = 2.8
Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+ I G +G GK + LV+++L
Sbjct: 5 LAIFGRAGVGK---SALVVRFL 23
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 24.5 bits (52), Expect = 2.8
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
++++G G GKT K +
Sbjct: 7 ILLTGTPGVGKTTLGKELASKS 28
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 169
Score = 24.6 bits (52), Expect = 2.9
Identities = 7/22 (31%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+V+ G+ G GK+ L +Q+
Sbjct: 7 LVVVGDGGVGKSA---LTIQFF 25
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 24.6 bits (52), Expect = 2.9
Identities = 7/22 (31%), Positives = 11/22 (50%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
V+ G+ GK T L++ Y
Sbjct: 6 CVVVGDGAVGK---TCLLISYT 24
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 24.7 bits (52), Expect = 3.0
Identities = 6/22 (27%), Positives = 11/22 (50%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+ I G GK+ L +Q++
Sbjct: 7 IAILGYRSVGKSS---LTIQFV 25
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 24.7 bits (52), Expect = 3.0
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Query: 44 VVISGESGSGKTECTKLVMQYLAAVNKSPSNLIT 77
VV+ GE G GK + L + + S+
Sbjct: 6 VVLIGEQGVGK---STLANIFAGVHDSMDSDCEV 36
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 24.6 bits (52), Expect = 3.0
Identities = 7/22 (31%), Positives = 11/22 (50%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
V+ G+ GKT L++ Y
Sbjct: 8 CVVVGDGAVGKTC---LLISYT 26
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 24.9 bits (53), Expect = 3.0
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 43 VVVISGESGSGKT 55
V +++G G+GKT
Sbjct: 5 VTLLTGFLGAGKT 17
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 24.6 bits (52), Expect = 3.1
Identities = 7/22 (31%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+V+ G G GK + L +Q++
Sbjct: 6 LVVLGSGGVGK---SALTVQFV 24
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 24.6 bits (52), Expect = 3.1
Identities = 7/22 (31%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+V+ G G GK+ L +Q++
Sbjct: 8 LVVVGGGGVGKSA---LTIQFI 26
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 184
Score = 24.7 bits (52), Expect = 3.2
Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
V+I G+SG GKT L+ QY+
Sbjct: 5 VIILGDSGVGKTS---LMNQYV 23
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 24.6 bits (52), Expect = 3.3
Identities = 7/22 (31%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
V + G G GK+ LV++++
Sbjct: 5 VAVFGAGGVGKSS---LVLRFV 23
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 252
Score = 24.8 bits (52), Expect = 3.4
Identities = 5/35 (14%), Positives = 13/35 (37%)
Query: 46 ISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQI 80
+ G +G+GK +++ + + Q
Sbjct: 38 LYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQF 72
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 24.7 bits (52), Expect = 3.4
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 39 SGNQVVVISGESGSGKT 55
+ I G +GSGK+
Sbjct: 23 GESNFTSIIGPNGSGKS 39
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima
[TaxId: 2336]}
Length = 308
Score = 24.6 bits (52), Expect = 3.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 40 GNQVVVISGESGSGKT 55
++V I G +GSGK+
Sbjct: 23 SDRVTAIVGPNGSGKS 38
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 24.2 bits (51), Expect = 3.6
Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+V+ G+ G+GKT V ++L
Sbjct: 6 LVLVGDGGTGKTT---FVKRHL 24
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 24.4 bits (52), Expect = 3.7
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 44 VVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQI 80
I G GSGK + + ++ + S +L+ + +
Sbjct: 9 AAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNM 45
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of
N-ethylmalemide-sensitive fusion (NSF) protein {Chinese
hamster (Cricetulus griseus) [TaxId: 10029]}
Length = 246
Score = 24.5 bits (52), Expect = 3.8
Identities = 6/30 (20%), Positives = 10/30 (33%)
Query: 44 VVISGESGSGKTECTKLVMQYLAAVNKSPS 73
V++ G SGKT + +
Sbjct: 43 VLLEGPPHSGKTALAAKIAEESNFPFIKIC 72
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 24.2 bits (51), Expect = 4.0
Identities = 6/22 (27%), Positives = 15/22 (68%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+V+ GE+ GK+ +V++++
Sbjct: 6 LVLLGEAAVGKSS---IVLRFV 24
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 24.2 bits (51), Expect = 4.1
Identities = 8/22 (36%), Positives = 11/22 (50%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
V+ G+ GK T L+M Y
Sbjct: 12 CVVVGDGAVGK---TCLLMSYA 30
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase),
helicase domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 24.2 bits (51), Expect = 4.2
Identities = 5/14 (35%), Positives = 11/14 (78%)
Query: 42 QVVVISGESGSGKT 55
+V++++ SG GK+
Sbjct: 36 EVIMVTSGSGMGKS 49
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 443
Score = 24.3 bits (52), Expect = 4.2
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+++ G +G GKTE + + +
Sbjct: 52 ILMIGPTGVGKTEIARRLAKLA 73
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 24.6 bits (52), Expect = 4.2
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 40 GNQVVVISGESGSGKT 55
I G +GSGK+
Sbjct: 25 SKGFTAIVGANGSGKS 40
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 24.1 bits (51), Expect = 4.4
Identities = 6/42 (14%), Positives = 16/42 (38%)
Query: 44 VVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQILEASP 85
V+ G G+GK + + + + +++ + S
Sbjct: 6 AVLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSE 47
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 24.2 bits (51), Expect = 4.5
Identities = 7/22 (31%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+V+ G G GK+ L +Q +
Sbjct: 6 LVVVGAGGVGKSA---LTIQLI 24
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 23.9 bits (50), Expect = 4.7
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 44 VVISGESGSGKT 55
V++ G G GK+
Sbjct: 4 VLLLGAPGVGKS 15
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 24.1 bits (51), Expect = 4.9
Identities = 8/22 (36%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
VV+ G G GK + L +Q++
Sbjct: 6 VVVLGSGGVGK---SALTVQFV 24
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 23.9 bits (50), Expect = 4.9
Identities = 5/22 (22%), Positives = 11/22 (50%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+V+ G GK+ ++ +Y
Sbjct: 5 MVVVGNGAVGKSS---MIQRYC 23
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 23.8 bits (50), Expect = 5.0
Identities = 7/22 (31%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+V GE GKT L+ +++
Sbjct: 3 LVFLGEQSVGKTS---LITRFM 21
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 23.9 bits (50), Expect = 5.0
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
V+I G+SG GKT L+ +Y+
Sbjct: 5 VIILGDSGVGKTS---LMHRYV 23
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 23.8 bits (50), Expect = 5.1
Identities = 5/22 (22%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
V + G++G GK+ ++ +++
Sbjct: 7 VCLLGDTGVGKSS---IMWRFV 25
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain
{Caenorhabditis elegans [TaxId: 6239]}
Length = 277
Score = 24.0 bits (51), Expect = 5.5
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 41 NQVVVISGESGSGKTECTKLV 61
+ + + G +GSGK+
Sbjct: 44 SFFLFLHGRAGSGKSVIASQA 64
>d2elca2 c.27.1.1 (A:66-329) Anthranilate
phosphoribosyltransferase (TrpD) {Thermus thermophilus
[TaxId: 274]}
Length = 264
Score = 24.1 bits (51), Expect = 5.6
Identities = 7/41 (17%), Positives = 12/41 (29%)
Query: 24 HLFAIGSAAYSALATSGNQVVVISGESGSGKTECTKLVMQY 64
L + + A A G V + S + L+
Sbjct: 20 GLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEAL 60
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 24.0 bits (51), Expect = 5.7
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 43 VVVISGESGSGKTECTKLVMQYLAAV 68
+V ++G GSGK+ V
Sbjct: 5 IVALTGGIGSGKSTVANAFADLGINV 30
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 296
Score = 24.2 bits (51), Expect = 5.7
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 43 VVVISGESGSGKTECTKLVMQYLAAVNK 70
+ +G+ G GKT + LA K
Sbjct: 10 YLFFTGKGGVGKTSISCATAIRLAEQGK 37
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 23.8 bits (50), Expect = 5.8
Identities = 4/12 (33%), Positives = 8/12 (66%)
Query: 44 VVISGESGSGKT 55
+++ G +GKT
Sbjct: 3 ILMVGLDAAGKT 14
>d2c4ba1 d.1.1.2 (A:3-110) Barnase {Bacillus amyloliquefaciens
[TaxId: 1390]}
Length = 108
Score = 23.2 bits (50), Expect = 6.7
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 61 VMQYLAAVNKSPSNLITEQ 79
V YL +K P N IT+
Sbjct: 8 VADYLQTYHKLPDNYITKS 26
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 23.7 bits (50), Expect = 6.7
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
VV+ GE GKT LV++Y
Sbjct: 6 VVLLGEGCVGKTS---LVLRYC 24
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 309
Score = 23.6 bits (50), Expect = 6.8
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 44 VVISGESGSGKTECTKLVMQY 64
+++ G +G GKTE + + +
Sbjct: 52 ILMIGPTGVGKTEIARRLAKL 72
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 23.5 bits (50), Expect = 7.1
Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 36 LATSGNQVVVISGESGSGK-TECTKLVMQYL 65
+ V+++ G +G+GK T C KL ++
Sbjct: 6 VPPEPPFVIMVVGVNGTGKTTSCGKLAKMFV 36
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 23.5 bits (49), Expect = 7.1
Identities = 6/22 (27%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+++ G+S GKT L ++
Sbjct: 5 IIVIGDSNVGKTC---LTYRFC 23
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 23.3 bits (49), Expect = 7.5
Identities = 7/22 (31%), Positives = 11/22 (50%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
++I G S GKT + +Y
Sbjct: 8 ILIIGNSSVGKTS---FLFRYA 26
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 23.6 bits (50), Expect = 7.5
Identities = 8/22 (36%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+V+ G +G GKT LV ++
Sbjct: 8 IVLIGNAGVGKTC---LVRRFT 26
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 23.3 bits (49), Expect = 7.5
Identities = 7/22 (31%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
++ G+SG GKT + +Y
Sbjct: 8 LLALGDSGVGKTT---FLYRYT 26
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 23.7 bits (50), Expect = 7.7
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 42 QVVVISGESGSGKTECTKLVMQYLAAVNKSPSNLITEQILEA 83
+++ +SG SGK +M +AV + I + + A
Sbjct: 2 KLIFLSGVKRSGKDTTADFIMSNYSAVKYQLAGPIKDALAYA 43
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 23.3 bits (49), Expect = 8.2
Identities = 6/22 (27%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
++ G +G+GK+ L+ Q++
Sbjct: 8 FLVIGNAGTGKSC---LLHQFI 26
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 23.4 bits (49), Expect = 8.6
Identities = 7/22 (31%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
V++ G+ G GK+ L+ +Y+
Sbjct: 9 VILLGDGGVGKSS---LMNRYV 27
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 23.5 bits (50), Expect = 8.8
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 36 LATSGNQVVVISGESGSGKTE-CTKLVMQY 64
+ V+++ G +G GKT KL Q+
Sbjct: 4 VEGKAPFVILMVGVNGVGKTTTIGKLARQF 33
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 23.3 bits (49), Expect = 9.1
Identities = 7/22 (31%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+I G+ G GK+ L+ Q+
Sbjct: 7 YIIIGDMGVGKSC---LLHQFT 25
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 23.3 bits (49), Expect = 9.5
Identities = 7/22 (31%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
+I G++G GK+ L++Q+
Sbjct: 6 YIIIGDTGVGKSC---LLLQFT 24
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 23.3 bits (49), Expect = 9.5
Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
Query: 44 VVISGESGSGKTECTKLVMQYL 65
VV+ G+SG GK+ L+ ++
Sbjct: 7 VVLIGDSGVGKSN---LLSRFT 25
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+
modules {Escherichia coli [TaxId: 562]}
Length = 268
Score = 23.0 bits (49), Expect = 9.9
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 36 LATSGNQVVVISGESGSGKTECTKLVMQYLAA 67
L ++ GESG GKT + + +
Sbjct: 34 LCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQ 65
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.130 0.356
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 376,508
Number of extensions: 14404
Number of successful extensions: 266
Number of sequences better than 10.0: 1
Number of HSP's gapped: 254
Number of HSP's successfully gapped: 172
Length of query: 114
Length of database: 2,407,596
Length adjustment: 72
Effective length of query: 42
Effective length of database: 1,419,036
Effective search space: 59599512
Effective search space used: 59599512
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 47 (22.6 bits)