BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7665
(296 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DH9|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
pdb|3DH9|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
Wild-Type
Length = 482
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 92/164 (56%), Gaps = 5/164 (3%)
Query: 113 TYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQH-GTVWGLGGTCVNVGCIPKK 171
+YDYDL V KEA +VA DFV P+ GT WG+GGTCVNVGCIPKK
Sbjct: 3 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKK 62
Query: 172 LFHRASLLNEEATTSDNFGFHMKKSFT--WKTLVDNVQKYIRXXXXXXXXXXXXXXIDYF 229
L H+ASLL E + +G+++ W LV +VQ +I+ ++Y
Sbjct: 63 LMHQASLLGEAVHEAAAYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYI 122
Query: 230 NAKAVFVDKHRV--KFAGEERTVSAQNFIIAVGGRPTYPDIPGA 271
N FVD H + K ERT++AQ F+IAVGGRP YPDIPGA
Sbjct: 123 NGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGA 166
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 24 AGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAIS-LSWIKGYNIEP 70
AGE+ QG+A + G +GIHPT AE + L+ K ++P
Sbjct: 433 AGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLAITKRSGLDP 480
>pdb|3DGH|A Chain A, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
pdb|3DGH|B Chain B, Crystal Structure Of Drosophila Thioredoxin Reductase,
C-Terminal 8- Residue Truncation
Length = 483
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 92/164 (56%), Gaps = 5/164 (3%)
Query: 113 TYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQH-GTVWGLGGTCVNVGCIPKK 171
+YDYDL V KEA +VA DFV P+ GT WG+GGTCVNVGCIPKK
Sbjct: 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKK 66
Query: 172 LFHRASLLNEEATTSDNFGFHMKKSFT--WKTLVDNVQKYIRXXXXXXXXXXXXXXIDYF 229
L H+ASLL E + +G+++ W LV +VQ +I+ ++Y
Sbjct: 67 LMHQASLLGEAVHEAAAYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYI 126
Query: 230 NAKAVFVDKHRV--KFAGEERTVSAQNFIIAVGGRPTYPDIPGA 271
N FVD H + K ERT++AQ F+IAVGGRP YPDIPGA
Sbjct: 127 NGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGA 170
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 24 AGEITQGYALGVMLGAYKQDFDALIGIHPTCAE 56
AGE+ QG+A + G +GIHPT AE
Sbjct: 437 AGEVIQGFAAALKSGLTINTLINTVGIHPTTAE 469
>pdb|2NVK|X Chain X, Crystal Structure Of Thioredoxin Reductase From Drosophila
Melanogaster
Length = 488
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/164 (44%), Positives = 92/164 (56%), Gaps = 5/164 (3%)
Query: 113 TYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQH-GTVWGLGGTCVNVGCIPKK 171
+YDYDL V KEA +VA DFV P+ GT WG+GGTCVNVGCIPKK
Sbjct: 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKK 66
Query: 172 LFHRASLLNEEATTSDNFGFHMKKSFT--WKTLVDNVQKYIRXXXXXXXXXXXXXXIDYF 229
L H+ASLL E + +G+++ W LV +VQ +I+ ++Y
Sbjct: 67 LMHQASLLGEAVHEAAAYGWNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYI 126
Query: 230 NAKAVFVDKHRV--KFAGEERTVSAQNFIIAVGGRPTYPDIPGA 271
N FVD H + K ERT++AQ F+IAVGGRP YPDIPGA
Sbjct: 127 NGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDIPGA 170
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 24 AGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAIS-LSWIKGYNIEP 70
AGE+ QG+A + G +GIHPT AE + L+ K ++P
Sbjct: 437 AGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTRLAITKRSGLDP 484
>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin Glutatione
Reductase From Schistosoma Mansoni In Complex With
Auranofin
Length = 598
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 110 NFQTYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIP 169
N YDYDL V KEAA K A+ D+V P+ GT WGLGGTCVNVGCIP
Sbjct: 102 NESKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIP 161
Query: 170 KKLFHRASLLNEEATTSDNFGFHM---KKSFTWKTLVDNVQKYIRXXXXXXXXXXXXXXI 226
KKL H+A LL+ +++FG+ + K S W T+V+ VQ +I +
Sbjct: 162 KKLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQV 221
Query: 227 DYFNAKAVFVDKHRVKFAGEER---TVSAQNFIIAVGGRPTYPDIPGA 271
Y NAK + H V+ + + T++ I+A G RP YP+IPGA
Sbjct: 222 TYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGA 269
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 23 NAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAIS 59
NAGEITQGYA+ + +GA K DFD IGIHPTC+E +
Sbjct: 543 NAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFT 579
>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
Reductase (Smtgr)
Length = 596
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 110 NFQTYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIP 169
N YDYDL V KEAA K A+ D+V P+ GT WGLGGTCVNVGCIP
Sbjct: 102 NESKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIP 161
Query: 170 KKLFHRASLLNEEATTSDNFGFHM---KKSFTWKTLVDNVQKYIRXXXXXXXXXXXXXXI 226
KKL H+A LL+ +++FG+ + K S W T+V+ VQ +I +
Sbjct: 162 KKLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQV 221
Query: 227 DYFNAKAVFVDKHRVKFAGEER---TVSAQNFIIAVGGRPTYPDIPGA 271
Y NAK + H V+ + + T++ I+A G RP YP+IPGA
Sbjct: 222 TYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGA 269
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 23 NAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAIS 59
NAGEITQGYA+ + +GA K DFD IGIHPTC+E +
Sbjct: 543 NAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFT 579
>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From
Schistosoma Mansoni
pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Gsh
pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Nadph
Length = 598
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 110 NFQTYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIP 169
N YDYDL V KEAA K A+ D+V P+ GT WGLGGTCVNVGCIP
Sbjct: 102 NESKYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIP 161
Query: 170 KKLFHRASLLNEEATTSDNFGFHM---KKSFTWKTLVDNVQKYIRXXXXXXXXXXXXXXI 226
KKL H+A LL+ +++FG+ + K S W T+V+ VQ +I +
Sbjct: 162 KKLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQV 221
Query: 227 DYFNAKAVFVDKHRVKFAGEER---TVSAQNFIIAVGGRPTYPDIPGA 271
Y NAK + H V+ + + T++ I+A G RP YP+IPGA
Sbjct: 222 TYLNAKGRLISPHEVQITDKNQKVSTITGNKIILATGERPKYPEIPGA 269
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 29/37 (78%)
Query: 23 NAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAIS 59
NAGEITQGYA+ + +GA K DFD IGIHPTC+E +
Sbjct: 543 NAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFT 579
>pdb|1ZDL|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
pdb|1ZKQ|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
Length = 517
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 90/157 (57%), Gaps = 5/157 (3%)
Query: 115 DYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFH 174
+DL V KEAA + KKVA+ D+V PS GT WGLGGTCVNVGCIPKKL H
Sbjct: 32 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMH 91
Query: 175 RASLLNEEATTSDNFGFHMKK--SFTWKTLVDNVQKYIRXXXXXXXXXXXXXXIDYFNAK 232
+A+LL + ++G+ + + WKT+ + VQ +++ + YFN K
Sbjct: 92 QAALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK 151
Query: 233 AVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYP 266
A FVD+H V+ G+ +SA++ +IA GGRP YP
Sbjct: 152 ASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYP 188
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 23 NAGEITQGYALGVMLGAYKQDFDALIGIHPTCA-EAISLSWIKGYNIEPEV 72
NAGE+TQG+ALG+ GA +GIHPTC+ E + L K +EP V
Sbjct: 462 NAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLHISKRSGLEPTV 512
>pdb|3DGZ|A Chain A, Crystal Structure Of Mouse Mitochondrial Thioredoxin
Reductase, C- Terminal 3-Residue Truncation
Length = 488
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 90/157 (57%), Gaps = 5/157 (3%)
Query: 115 DYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFH 174
+DL V KEAA + KKVA+ D+V PS GT WGLGGTCVNVGCIPKKL H
Sbjct: 6 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMH 65
Query: 175 RASLLNEEATTSDNFGFHMKK--SFTWKTLVDNVQKYIRXXXXXXXXXXXXXXIDYFNAK 232
+A+LL + ++G+ + + WKT+ + VQ +++ + YFN K
Sbjct: 66 QAALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIK 125
Query: 233 AVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYP 266
A FVD+H V+ G+ +SA++ +IA GGRP YP
Sbjct: 126 ASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYP 162
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 23 NAGEITQGYALGVMLGAYKQDFDALIGIHPTCA-EAISLSWIKGYNIEPEV 72
NAGE+TQG+ALG+ GA +GIHPTC+ E + L K +EP V
Sbjct: 436 NAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKLHISKRSGLEPTV 486
>pdb|3QFA|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|A Chain A, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|B Chain B, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 519
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 5/166 (3%)
Query: 112 QTYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKK 171
++YDYDL + KEAA KKV + DFVTP+ GT WGLGGTCVNVGCIPKK
Sbjct: 29 KSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKK 88
Query: 172 LFHRASLLNEEATTSDNFGFHMKKSFT--WKTLVDNVQKYIRXXXXXXXXXXXXXXIDYF 229
L H+A+LL + S N+G+ ++++ W +++ VQ +I + Y
Sbjct: 89 LMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYE 148
Query: 230 NAKAVFVDKHRVKFA---GEERTVSAQNFIIAVGGRPTYPDIPGAR 272
NA F+ HR+K G+E+ SA+ F+IA G RP Y IPG +
Sbjct: 149 NAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDK 194
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 23 NAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAIS 59
NAGE+TQG+A + G K+ D+ IGIHP CAE +
Sbjct: 464 NAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFT 500
>pdb|2J3N|A Chain A, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|B Chain B, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|C Chain C, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|D Chain D, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|E Chain E, X-Ray Structure Of Human Thioredoxin Reductase 1
pdb|2J3N|F Chain F, X-Ray Structure Of Human Thioredoxin Reductase 1
Length = 519
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 5/166 (3%)
Query: 112 QTYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKK 171
++YDYDL + KEAA KKV + DFVTP+ GT WGLGGTCVNVGCIPKK
Sbjct: 29 KSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKK 88
Query: 172 LFHRASLLNEEATTSDNFGFHMKKSFT--WKTLVDNVQKYIRXXXXXXXXXXXXXXIDYF 229
L H+A+LL + S N+G+ ++++ W +++ VQ +I + Y
Sbjct: 89 LMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYE 148
Query: 230 NAKAVFVDKHRVKFA---GEERTVSAQNFIIAVGGRPTYPDIPGAR 272
NA F+ HR+K G+E+ SA+ F+IA G RP Y IPG +
Sbjct: 149 NAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDK 194
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 23 NAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAIS 59
NAGE+TQG+A + G K+ D+ IGIHP CAE +
Sbjct: 464 NAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFT 500
>pdb|2CFY|A Chain A, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|B Chain B, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|C Chain C, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|D Chain D, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|E Chain E, Crystal Structure Of Human Thioredoxin Reductase 1
pdb|2CFY|F Chain F, Crystal Structure Of Human Thioredoxin Reductase 1
Length = 521
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 5/166 (3%)
Query: 112 QTYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKK 171
++YDYDL + KEAA KKV + DFVTP+ GT WGLGGTCVNVGCIPKK
Sbjct: 31 KSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKK 90
Query: 172 LFHRASLLNEEATTSDNFGFHMKKSFT--WKTLVDNVQKYIRXXXXXXXXXXXXXXIDYF 229
L H+A+LL + S N+G+ ++++ W +++ VQ +I + Y
Sbjct: 91 LMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYE 150
Query: 230 NAKAVFVDKHRVKFA---GEERTVSAQNFIIAVGGRPTYPDIPGAR 272
NA F+ HR+K G+E+ SA+ F+IA G RP Y IPG +
Sbjct: 151 NAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDK 196
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 23 NAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAIS 59
NAGE+TQG+A + G K+ D+ IGIHP CAE +
Sbjct: 466 NAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFT 502
>pdb|2ZZ0|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZ0|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I (Secys
498 Cys)
pdb|2ZZB|A Chain A, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|B Chain B, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|C Chain C, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZB|D Chain D, Crystal Structure Of Human Thioredoxin Reductase I And
Terpyridine Platinum(Ii)
pdb|2ZZC|A Chain A, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|B Chain B, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|C Chain C, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
pdb|2ZZC|D Chain D, Crystal Structure Of Nadp(H):human Thioredoxin Reductase I
Length = 513
Score = 128 bits (321), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 5/166 (3%)
Query: 112 QTYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKK 171
++YDYDL + KEAA KKV + DFVTP+ GT WGLGGTCVNVGCIPKK
Sbjct: 23 KSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKK 82
Query: 172 LFHRASLLNEEATTSDNFGFHMKKSFT--WKTLVDNVQKYIRXXXXXXXXXXXXXXIDYF 229
L H+A+LL + S N+G+ ++++ W +++ VQ +I + Y
Sbjct: 83 LMHQAALLGQALQDSRNYGWKVEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYE 142
Query: 230 NAKAVFVDKHRVKFA---GEERTVSAQNFIIAVGGRPTYPDIPGAR 272
NA F+ HR+K G+E+ SA+ F+IA G RP Y IPG +
Sbjct: 143 NAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGIPGDK 188
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 23 NAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAIS 59
NAGE+TQG+A + G K+ D+ IGIHP CAE +
Sbjct: 458 NAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFT 494
>pdb|3EAN|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAN|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Reduced C-Terminal Tail
pdb|3EAO|A Chain A, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|B Chain B, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|C Chain C, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|D Chain D, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|E Chain E, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
pdb|3EAO|F Chain F, Crystal Structure Of Recombinant Rat Selenoprotein
Thioredoxin Reductase 1 With Oxidized C-Terminal Tail
Length = 499
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 5/166 (3%)
Query: 112 QTYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKK 171
++YD+DL + KEAA +KKV + DFVTP+ GT WGLGGTCVNVGCIPKK
Sbjct: 9 KSYDFDLIIIGGGSGGLAAAKEAAKFDKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKK 68
Query: 172 LFHRASLLNEEATTSDNFGFHMKKSFT--WKTLVDNVQKYIRXXXXXXXXXXXXXXIDYF 229
L H+A+LL + S N+G+ ++ + W+ + ++VQ +I + Y
Sbjct: 69 LMHQAALLGQALKDSRNYGWKLEDTVKHDWEKMTESVQNHIGSLNWGYRVALREKKVVYE 128
Query: 230 NAKAVFVDKHRV---KFAGEERTVSAQNFIIAVGGRPTYPDIPGAR 272
NA F+ H++ G+E+ SA+ F+IA G RP Y IPG +
Sbjct: 129 NAYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYLGIPGDK 174
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 23 NAGEITQGYALGVMLGAYKQDFDALIGIHPTCAE 56
NAGE+TQG+A + G KQ D+ IGIHP CAE
Sbjct: 444 NAGEVTQGFAAALKCGLTKQQLDSTIGIHPVCAE 477
>pdb|1H6V|A Chain A, Mammalian Thioredoxin Reductase
pdb|1H6V|B Chain B, Mammalian Thioredoxin Reductase
pdb|1H6V|C Chain C, Mammalian Thioredoxin Reductase
pdb|1H6V|D Chain D, Mammalian Thioredoxin Reductase
pdb|1H6V|E Chain E, Mammalian Thioredoxin Reductase
pdb|1H6V|F Chain F, Mammalian Thioredoxin Reductase
Length = 499
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 5/166 (3%)
Query: 112 QTYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKK 171
++YD+DL + KEAA +KKV + DFVTP+ GT WGLGGTCVNVGCIPKK
Sbjct: 9 KSYDFDLIIIGGGSGGLAAAKEAAKFDKKVMVLDFVTPTPLGTNWGLGGTCVNVGCIPKK 68
Query: 172 LFHRASLLNEEATTSDNFGFHMKKSFT--WKTLVDNVQKYIRXXXXXXXXXXXXXXIDYF 229
L H+A+LL + S N+G+ ++ + W+ + ++VQ +I + Y
Sbjct: 69 LMHQAALLGQALKDSRNYGWKLEDTVKHDWEKMTESVQNHIGSLNWGYRVALREKKVVYE 128
Query: 230 NAKAVFVDKHRV---KFAGEERTVSAQNFIIAVGGRPTYPDIPGAR 272
NA F+ H++ G+E+ SA+ F+IA G RP Y IPG +
Sbjct: 129 NAYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYLGIPGDK 174
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%)
Query: 23 NAGEITQGYALGVMLGAYKQDFDALIGIHPTCAE 56
NAGE+TQG+A + G KQ D+ IGIHP CAE
Sbjct: 444 NAGEVTQGFAAALKCGLTKQQLDSTIGIHPVCAE 477
>pdb|4B1B|A Chain A, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
pdb|4B1B|B Chain B, Crystal Structure Of Plasmodium Falciparum Oxidised
Thioredoxin Reductase At 2.9 Angstrom
Length = 542
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 112 QTYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKK 171
TYDYD V KEAA+ +V LFD+V PS GT WG+GGTCVNVGC+PKK
Sbjct: 39 HTYDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKK 98
Query: 172 LFHRASLLNEE-ATTSDNFGFHMKK-SFTWKTLVDNVQKYIRXXXXXXXXXXXXXXIDYF 229
L H A + S +G+ WK LV VQ +IR + Y
Sbjct: 99 LMHYAGHMGSIFKLDSKAYGWKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYI 158
Query: 230 NAKAVFVDKHRVKF-----AGEERTVSAQNFIIAVGGRPTYP-DIPGARLLRTLS 278
N A DK+ V + +E TV+ + +IA G RP P D+ GA+ L S
Sbjct: 159 NGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIPDDVEGAKELSITS 213
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 23 NAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEA 57
NAGE+TQG AL + L K+DFD IGIHPT AE+
Sbjct: 482 NAGEVTQGMALALRLKVKKKDFDNCIGIHPTDAES 516
>pdb|2R9Z|A Chain A, Glutathione Amide Reductase From Chromatium Gracile
pdb|2R9Z|B Chain B, Glutathione Amide Reductase From Chromatium Gracile
pdb|2RAB|A Chain A, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
pdb|2RAB|B Chain B, Structure Of Glutathione Amide Reductase From Chromatium
Gracile In Complex With Nad
Length = 463
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Query: 113 TYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKL 172
T +DL ++AA+ K+VAL + LGGTCVNVGC+PKK+
Sbjct: 2 TQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA---------LGGTCVNVGCVPKKV 52
Query: 173 FHRASLLNEEATTSDNFGFHMK-KSFTWKTLVDNVQKYIRXXXXXXXXXXXXXXIDYFNA 231
AS L E + FG + W LV +YI I +
Sbjct: 53 MWYASHLAEAVRDAPGFGVQASGGTLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDG 112
Query: 232 KAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPDIPGARL 273
A FVD H ++ G+ +SA + +IA GGRP P +PGA L
Sbjct: 113 HARFVDAHTIEVEGQR--LSADHIVIATGGRPIVPRLPGAEL 152
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 15 ITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
+ + + A E+ QG+A+ V +GA K DFD + IHP AE +
Sbjct: 401 VGVHVIGDGADEMLQGFAVAVKMGATKADFDNTVAIHPGSAEEL 444
>pdb|1GER|A Chain A, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GER|B Chain B, The Structure Of Glutathione Reductase From Escherichia
Coli At 1.86 Angstroms Resolution: Comparison With The
Enzyme From Human Erythrocytes
pdb|1GET|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GET|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 158 LGGTCVNVGCIPKK-LFHRASLLNEEATTSDNFGFHMK-KSFTWKTLVDNVQKYIRXXXX 215
LGGTCVNVGC+PKK ++H A + ++GF F W+TL+ + YI
Sbjct: 38 LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHT 97
Query: 216 XXXXXXXXXXIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPDIPG 270
+D A FVD ++ GE T++A + +IA GGRP++PDIPG
Sbjct: 98 SYENVLGKNNVDVIKGFARFVDAKTLEVNGE--TITADHILIATGGRPSHPDIPG 150
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAE 56
E+ QG+A+ + +GA K+DFD + IHPT AE
Sbjct: 414 EMLQGFAVALKMGATKKDFDNTVAIHPTAAE 444
>pdb|1GES|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GES|B Chain B, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|A Chain A, Anatomy Of An Engineered Nad-Binding Site
pdb|1GEU|B Chain B, Anatomy Of An Engineered Nad-Binding Site
Length = 450
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 158 LGGTCVNVGCIPKK-LFHRASLLNEEATTSDNFGFHMK-KSFTWKTLVDNVQKYIRXXXX 215
LGGTCVNVGC+PKK ++H A + ++GF F W+TL+ + YI
Sbjct: 38 LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHT 97
Query: 216 XXXXXXXXXXIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPDIPG 270
+D A FVD ++ GE T++A + +IA GGRP++PDIPG
Sbjct: 98 SYENVLGKNNVDVIKGFARFVDAKTLEVNGE--TITADHILIATGGRPSHPDIPG 150
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAE 56
E+ QG+A+ + +GA K+DFD + IHPT AE
Sbjct: 414 EMLQGFAVALKMGATKKDFDNTVAIHPTAAE 444
>pdb|1ONF|A Chain A, Crystal Structure Of Plasmodium Falciparum Glutathione
Reductase
Length = 500
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 21/167 (12%)
Query: 116 YDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHR 175
YDL V + AA N KVAL V S+ LGGTCVNVGC+PKK+
Sbjct: 3 YDLIVIGGGSGGMAAARRAARHNAKVAL---VEKSR------LGGTCVNVGCVPKKIMFN 53
Query: 176 ASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRXXXXXXXXXXXXXXIDYFNAKAVF 235
A+ +++ S ++GF K SF LV+ KYI+ +D + A F
Sbjct: 54 AASVHDILENSRHYGFDTKFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASF 113
Query: 236 VDKHRVKFAG------------EERTVSAQNFIIAVGGRPTYPDIPG 270
+ ++R+ G E + +N +IAVG +P +P + G
Sbjct: 114 LSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFPPVKG 160
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 23 NAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEA-ISLS-WIK 64
NA EI QG+A+ + + A K+DFD I IHPT AE ++L W+K
Sbjct: 457 NADEIVQGFAVALKMNATKKDFDETIPIHPTAAEEFLTLQPWMK 500
>pdb|3O0H|A Chain A, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
pdb|3O0H|B Chain B, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
Length = 484
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 10/151 (6%)
Query: 113 TYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKL 172
++D+DL V + A ++ K+VA+ + + +GGTCV GC+PKKL
Sbjct: 24 SFDFDLFVIGSGSGGVRAARLAGALGKRVAIAE---------EYRIGGTCVIRGCVPKKL 74
Query: 173 FHRASLLNEEATTSDNFGF-HMKKSFTWKTLVDNVQKYIRXXXXXXXXXXXXXXIDYFNA 231
+ AS +E + S FG+ + F W+ LV K I + + +
Sbjct: 75 YFYASQYAQEFSKSIGFGWKYADPIFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYES 134
Query: 232 KAVFVDKHRVKFAGEERTVSAQNFIIAVGGR 262
+AVFVD+H ++ + +SA+ +IA G +
Sbjct: 135 RAVFVDEHTLELSVTGERISAEKILIATGAK 165
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 10 EVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
E + A + NAGEI Q + + K FD + +HPT +E +
Sbjct: 418 ESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEEL 466
>pdb|4DNA|A Chain A, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
pdb|4DNA|B Chain B, Crystal Structure Of Putative Glutathione Reductase From
Sinorhizobium Meliloti 1021
Length = 463
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 114 YDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLF 173
+DYDL V + AA++ KKVA+ + + GGTCV GC+PKKL+
Sbjct: 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAE---------EFRYGGTCVIRGCVPKKLY 54
Query: 174 HRASLLNEEATTSDNFGFHMKKS-FTWKTLVDNVQKYIRXXXXXXXXXXXXXXIDYFNAK 232
AS E + FG+ + +S F W LV ++ I + + +
Sbjct: 55 VYASQFAEHFEDAAGFGWTVGESRFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTR 114
Query: 233 AVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPD-IPGARLLRT 276
A + VK +TV+A+ +IAVGG P+ D +PG L T
Sbjct: 115 AELAGPNTVKLLASGKTVTAERIVIAVGGHPSPHDALPGHELCIT 159
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 15 ITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWIKGYNI 68
+ A I ++AGE Q + + G K DFD +HPT AE + + Y +
Sbjct: 403 VGAHILGHDAGEXAQLLGISLRAGCTKDDFDRTXAVHPTAAEELVTXYQPSYRV 456
>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Glutathione Complex
pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Trypanothione Complex
pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
Disulfide Between Trypanothione And The Enzyme
pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
Glutathionylspermidine Complex
Length = 461
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Query: 158 LGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGF-HMKKSFTWKTLVDNVQKYIRXXXXX 216
LGGTCVNVGC+PKK+ ++ +E ++GF + F W+ + + Y+
Sbjct: 37 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAI 96
Query: 217 XXXXXXXXXIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYP---DIPGARL 273
I+ A F + + +A + +IA GG P+ P IPGA L
Sbjct: 97 YQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASL 156
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
E+ QG+A+ V +GA K DFD + IHPT +E +
Sbjct: 425 EMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 457
>pdb|1XAN|A Chain A, Human Glutathione Reductase In Complex With A Xanthene
Inhibitor
Length = 461
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Query: 158 LGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGF-HMKKSFTWKTLVDNVQKYIRXXXXX 216
LGGTCVNVGC+PKK+ ++ +E ++GF + F W+ + + Y+
Sbjct: 37 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAI 96
Query: 217 XXXXXXXXXIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYP---DIPGARL 273
I+ A F + + +A + +IA GG P+ P IPGA L
Sbjct: 97 YQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASL 156
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
E+ QG+A+ V +GA K DFD + IHPT +E +
Sbjct: 425 EMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 457
>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
Length = 478
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Query: 158 LGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGF-HMKKSFTWKTLVDNVQKYIRXXXXX 216
LGGTCVNVGC+PKK+ ++ +E ++GF + F W+ + + Y+
Sbjct: 54 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAI 113
Query: 217 XXXXXXXXXIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYP---DIPGARL 273
I+ A F + + +A + +IA GG P+ P IPGA L
Sbjct: 114 YQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASL 173
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
E+ QG+A+ V +GA K DFD + IHPT +E +
Sbjct: 442 EMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 474
>pdb|3DJG|X Chain X, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
Length = 477
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Query: 158 LGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGF-HMKKSFTWKTLVDNVQKYIRXXXXX 216
LGGTCVNVGC+PKK+ ++ +E ++GF + F W+ + + Y+
Sbjct: 53 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAI 112
Query: 217 XXXXXXXXXIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYP---DIPGARL 273
I+ A F + + +A + +IA GG P+ P IPGA L
Sbjct: 113 YQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASL 172
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
E+ QG+A+ V +GA K DFD + IHPT +E +
Sbjct: 441 EMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 473
>pdb|1BWC|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Ajoene Inhibitor And Subversive Substrate
pdb|2GH5|A Chain A, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|2GH5|B Chain B, Crystal Structure Of Human Glutathione Reductase Complexed
With A Fluoro-analogue Of The Menadione Derivative M5
pdb|1GRA|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRB|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRE|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|1GRF|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
pdb|3GRS|A Chain A, Refined Structure Of Glutathione Reductase At 1.54
Angstroms Resolution
pdb|4GR1|A Chain A, The Binding Of The Retro-analogue Of Glutathione Disulfide
To Glutathione Reductase
pdb|3DJJ|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK4|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK8|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|3DK9|A Chain A, Catalytic Cycle Of Human Glutathione Reductase Near 1 A
Resolution
pdb|1GRH|A Chain A, Inhibition Of Human Glutathione Reductase By The
Nitrosourea Drugs 1, 3-Bis(2-Chloroethyl)-1-Nitrosourea
And 1-(2-Chloroethyl)-3-(2- Hydroxyethyl)-1-Nitrosourea
pdb|3SQP|A Chain A, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
pdb|3SQP|B Chain B, Structure Of Human Glutathione Reductase Complexed With
Pyocyanin, An Agent With Antimalarial Activity
Length = 478
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Query: 158 LGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGF-HMKKSFTWKTLVDNVQKYIRXXXXX 216
LGGTCVNVGC+PKK+ ++ +E ++GF + F W+ + + Y+
Sbjct: 54 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAI 113
Query: 217 XXXXXXXXXIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYP---DIPGARL 273
I+ A F + + +A + +IA GG P+ P IPGA L
Sbjct: 114 YQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASL 173
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
E+ QG+A+ V +GA K DFD + IHPT +E +
Sbjct: 442 EMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 474
>pdb|2AAQ|A Chain A, Crystal Structure Analysis Of The Human Glutahione
Reductase, Complexed With Gopi
Length = 479
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Query: 158 LGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGF-HMKKSFTWKTLVDNVQKYIRXXXXX 216
LGGTCVNVGC+PKK+ ++ +E ++GF + F W+ + + Y+
Sbjct: 55 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAI 114
Query: 217 XXXXXXXXXIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYP---DIPGARL 273
I+ A F + + +A + +IA GG P+ P IPGA L
Sbjct: 115 YQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASL 174
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
E+ QG+A+ V +GA K DFD + IHPT +E +
Sbjct: 443 EMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 475
>pdb|2HQM|A Chain A, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
pdb|2HQM|B Chain B, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
Length = 479
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 70/182 (38%), Gaps = 22/182 (12%)
Query: 103 FYDYLDNNFQTYDYDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTC 162
+ +++ N + YDY V + AAS K L + LGGTC
Sbjct: 1 YVEFMSTNTKHYDY--LVIGGGSGGVASARRAASYGAKTLLVE---------AKALGGTC 49
Query: 163 VNVGCIPKKLFHRASLLNEEATTSDNFGFHMK-------KSFTWKTLVDNVQKYIRXXXX 215
VNVGC+PKK+ AS L + ++ +G + +F W Y+
Sbjct: 50 VNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHLTFNWPEFKQKRDAYVHRLNG 109
Query: 216 XXXXXXXXXXIDYFNAKAVFVDKHRVKFAGEERTV---SAQNFIIAVGGRPTYPD-IPGA 271
+D A F V+ + T SA + ++A GG+ +P+ IPG
Sbjct: 110 IYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKAIFPENIPGF 169
Query: 272 RL 273
L
Sbjct: 170 EL 171
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 19 ISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
I +++ EI QG+ + + +GA K DFD + IHPT AE +
Sbjct: 428 IVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEEL 467
>pdb|1GSN|A Chain A, Human Glutathione Reductase Modified By
Dinitrosoglutathione
Length = 478
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 13/162 (8%)
Query: 116 YDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHR 175
YD V + AA + + A+ + LGGTCVNVG +PKK+
Sbjct: 21 YDYLVIGGGSGGLASARRAAELGARAAVVES---------HKLGGTCVNVGXVPKKVMWN 71
Query: 176 ASLLNEEATTSDNFGF-HMKKSFTWKTLVDNVQKYIRXXXXXXXXXXXXXXIDYFNAKAV 234
++ +E ++GF + F W+ + + Y+ I+ A
Sbjct: 72 TAVHSEFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAA 131
Query: 235 FVDKHRVKFAGEERTVSAQNFIIAVGGRPTYP---DIPGARL 273
F + + +A + +IA GG P+ P IPGA L
Sbjct: 132 FTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASL 173
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
E+ QG+A+ V +GA K DFD + IHPT +E +
Sbjct: 442 EMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 474
>pdb|1GRG|A Chain A, Substrate Binding And Catalysis By Glutathione Reductase
As Derived From Refined Enzyme: Substrate Crystal
Structures At 2 Angstroms Resolution
Length = 478
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 4/120 (3%)
Query: 158 LGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGF-HMKKSFTWKTLVDNVQKYIRXXXXX 216
LGGT VNVGC+PKK+ ++ +E ++GF + F W+ + + Y+
Sbjct: 54 LGGTXVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAI 113
Query: 217 XXXXXXXXXIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYP---DIPGARL 273
I+ A F + + +A + +IA GG P+ P IPGA L
Sbjct: 114 YQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASL 173
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
E+ QG+A+ V +GA K DFD + IHPT +E +
Sbjct: 442 EMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 474
>pdb|1DNC|A Chain A, Human Glutathione Reductase Modified By
Diglutathione-Dinitroso-Iron
Length = 478
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 4/120 (3%)
Query: 158 LGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGF-HMKKSFTWKTLVDNVQKYIRXXXXX 216
LGGTCVNVG +PKK+ ++ +E ++GF + F W+ + + Y+
Sbjct: 54 LGGTCVNVGXVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAI 113
Query: 217 XXXXXXXXXIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYP---DIPGARL 273
I+ A F + + +A + +IA GG P+ P IPGA L
Sbjct: 114 YQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGASL 173
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
E+ QG+A+ V +GA K DFD + IHPT +E +
Sbjct: 442 EMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 474
>pdb|2JK6|A Chain A, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2JK6|B Chain B, Structure Of Trypanothione Reductase From Leishmania
Infantum
pdb|2W0H|A Chain A, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2W0H|B Chain B, X Ray Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Antimony And Nadph
pdb|2YAU|A Chain A, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|2YAU|B Chain B, X-Ray Structure Of The Leishmania Infantum Tryopanothione
Reductase In Complex With Auranofin
pdb|4ADW|A Chain A, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
pdb|4ADW|B Chain B, Crystal Structure Of Leishmania Infantum Trypanothione
Reductase In Complex With Nadph And Trypanothione
Length = 511
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 56/148 (37%), Gaps = 11/148 (7%)
Query: 134 AASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193
A + KKVA+ D LGGTCVNVGC+PKKL + + S FG+ M
Sbjct: 44 AVTHKKKVAVVDVQATHGPPLFAALGGTCVNVGCVPKKLMVTGAQYMDLIRESGGFGWEM 103
Query: 194 KKSF---TWKTLVDNVQKYIRXXXXXXXXX-XXXXXIDYFNAKAVFVDKHRVKFAGEE-- 247
+ WKTL+ K + + + D H V E
Sbjct: 104 DRESLCPNWKTLIAAKNKVVNSINESYKSMFADTEGLSFHMGFGALQDAHTVVVRKSEDP 163
Query: 248 -----RTVSAQNFIIAVGGRPTYPDIPG 270
T+ + +IA G PT +PG
Sbjct: 164 HSDVLETLDTEYILIATGSWPTRLGVPG 191
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 22 NNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
++A EI Q + + +GA DF + IG+HPT AE +
Sbjct: 452 DSAPEIIQSVGICMKMGAKISDFHSTIGVHPTSAEEL 488
>pdb|2X50|A Chain A, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
pdb|2X50|B Chain B, Crystal Structure Of Trypanothione Reductase From
Leishmania Infantum In Complex With Nadph And Silver
Length = 510
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 56/148 (37%), Gaps = 11/148 (7%)
Query: 134 AASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193
A + KKVA+ D LGGTCVNVGC+PKKL + + S FG+ M
Sbjct: 44 AVTHKKKVAVVDVQATHGPPLFAALGGTCVNVGCVPKKLMVTGAQYMDLIRESGGFGWEM 103
Query: 194 KKSF---TWKTLVDNVQKYIRXXXXXXXXX-XXXXXIDYFNAKAVFVDKHRVKFAGEE-- 247
+ WKTL+ K + + + D H V E
Sbjct: 104 DRESLCPNWKTLIAAKNKVVNSINESYKSMFADTEGLSFHMGFGALQDAHTVVVRKSEDP 163
Query: 248 -----RTVSAQNFIIAVGGRPTYPDIPG 270
T+ + +IA G PT +PG
Sbjct: 164 HSDVLETLDTEYILIATGSWPTRLGVPG 191
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 22 NNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
++A EI Q + + +GA DF + IG+HPT AE +
Sbjct: 452 DSAPEIIQSVGICMKMGAKISDFHSTIGVHPTSAEEL 488
>pdb|1K4Q|A Chain A, Human Glutathione Reductase Inactivated By Peroxynitrite
Length = 463
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 158 LGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGF-HMKKSFTWKTLVDNVQ-KYI-RXXX 214
LGGTCVNVGC+PKK+ ++ +E ++GF + F W+ + + Y+ R
Sbjct: 37 LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVIKEKRDAXYVSRLNA 96
Query: 215 XXXXXXXXXXXIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYP---DIPGA 271
I+ A F + + +A + +IA GG P+ P IPGA
Sbjct: 97 IXYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPHESQIPGA 156
Query: 272 RL 273
L
Sbjct: 157 SL 158
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
E+ QG+A+ V +GA K DFD + IHPT +E +
Sbjct: 427 EMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 459
>pdb|2WBA|A Chain A, Properties Of Trypanothione Reductase From T. Brucei
pdb|2WBA|B Chain B, Properties Of Trypanothione Reductase From T. Brucei
Length = 492
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 116 YDLCVXXXXXXXXXXXKEAASM-NKKVALFDFVTPSQHGTVW--GLGGTCVNVGCIPKKL 172
+DL V AA++ K+VA+ D T HG + LGGTCVNVGC+PKKL
Sbjct: 5 FDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQT--SHGPPFYAALGGTCVNVGCVPKKL 62
Query: 173 FHRASLLNEEATTSDNFGFHMKKS---FTWKTLV-DNVQKYIRXXXXXXXXXXXXXXIDY 228
+ + S FG+ S WK L+ + + +D+
Sbjct: 63 MVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDF 122
Query: 229 F------NAKAVFVDKHRV--KFAGEERTVSAQNFIIAVGGRPTYPDIPG 270
F +K V V + K A +ER + A + ++A G P P IPG
Sbjct: 123 FLGWGSLESKNVVVVRETADPKSAVKER-LQADHILLATGSWPQMPAIPG 171
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 13 TFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI------SLSWIKGY 66
T + + + A EI Q + + L A DF IG+HPT AE + S ++KG
Sbjct: 423 TVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRTPSYYYVKGE 482
Query: 67 NIE 69
+E
Sbjct: 483 KME 485
>pdb|3IC9|A Chain A, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|B Chain B, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|C Chain C, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h.
pdb|3IC9|D Chain D, The Structure Of Dihydrolipoamide Dehydrogenase From
Colwellia Psychrerythraea 34h
Length = 492
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 159 GGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKK-SFTWKTLVDNVQ-KYIRXXXXX 216
G TC VGC P KL A+ + A+ +D FG + + S K + +Q + R
Sbjct: 43 GTTCARVGCXPSKLLIAAADASYHASQTDLFGIQVDRISVNGKAVXKRIQTERDRFVGFV 102
Query: 217 XXXXXXXXXIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPDI---PGARL 273
D A F+D+H ++ + V A+ +IA G RP YP+ G+RL
Sbjct: 103 VESVESFDEQDKIRGFAKFLDEHTLQV-DDHSQVIAKRIVIATGSRPNYPEFLAAAGSRL 161
Query: 274 LRTLSLLSGVDPP 286
L +L D P
Sbjct: 162 LTNDNLFELNDLP 174
>pdb|2WOI|A Chain A, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|B Chain B, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|C Chain C, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOI|D Chain D, Trypanothione Reductase From Trypanosoma Brucei
pdb|2WOV|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOV|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Bound
Nadp.
pdb|2WOW|A Chain A, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|B Chain B, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|C Chain C, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WOW|D Chain D, Trypanosoma Brucei Trypanothione Reductase With Nadp And
Trypanothione Bound
pdb|2WP5|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP5|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00065414)
pdb|2WP6|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WP6|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00071494)
pdb|2WPC|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPC|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073357)
pdb|2WPE|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPE|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00073359)
pdb|2WPF|A Chain A, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|B Chain B, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|C Chain C, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
pdb|2WPF|D Chain D, Trypanosoma Brucei Trypanothione Reductase In Complex With
3,4-Dihydroquinazoline Inhibitor (Ddd00085762)
Length = 495
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 116 YDLCVXXXXXXXXXXXKEAASM-NKKVALFDFVTPSQHGTVW--GLGGTCVNVGCIPKKL 172
+DL V AA++ K+VA+ D T HG + LGGTCVNVGC+PKKL
Sbjct: 8 FDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQT--SHGPPFYAALGGTCVNVGCVPKKL 65
Query: 173 FHRASLLNEEATTSDNFGFHMKKS---FTWKTLV-DNVQKYIRXXXXXXXXXXXXXXIDY 228
+ + S FG+ S WK L+ + + +D+
Sbjct: 66 MVTGAQYMDHLRESAGFGWEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDF 125
Query: 229 F------NAKAVFVDKHRV--KFAGEERTVSAQNFIIAVGGRPTYPDIPG 270
F +K V V + K A +ER + A + ++A G P P IPG
Sbjct: 126 FLGWGSLESKNVVVVRETADPKSAVKER-LQADHILLATGSWPQMPAIPG 174
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 13 TFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI------SLSWIKGY 66
T + + + A EI Q + + L A DF IG+HPT AE + S ++KG
Sbjct: 426 TVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELCSMRTPSYYYVKGE 485
Query: 67 NIE 69
+E
Sbjct: 486 KME 488
>pdb|1NDA|A Chain A, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|B Chain B, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|C Chain C, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
pdb|1NDA|D Chain D, The Structure Of Trypanosoma Cruzi Trypanothione Reductase
In The Oxidized And Nadph Reduced State
Length = 491
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 14/168 (8%)
Query: 116 YDLCVXXXXXXXXXXXKEAASM-NKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFH 174
+DL V AA++ K+VA+ D LGGTCVNVGC+PKKL
Sbjct: 5 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKKLMV 64
Query: 175 RASLLNEEATTSDNFGFHMKKS---FTWKTLVD-NVQKYIRXXXXXXXXXXXXXXIDYFN 230
+ E S FG+ ++ WK L+ + + +++F
Sbjct: 65 TGAQYMEHLRESAGFGWEFDRTTLRAEWKKLIAVKDEAVLNINKSYEEMFRDTEGLEFFL 124
Query: 231 AKAVFVDKHRVKF--------AGEERTVSAQNFIIAVGGRPTYPDIPG 270
K+ V A +ER + +N ++A G P P+IPG
Sbjct: 125 GWGSLESKNVVNVRESADPASAVKER-LETENILLASGSWPHMPNIPG 171
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 13 TFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI------SLSWIKGY 66
T + + +NA EI QG + + L A DF IG+HPT AE + S ++KG
Sbjct: 422 TVLGVHLLGDNAPEIIQGVGICLKLNAKISDFYNTIGVHPTSAEELCSMRTPSYYYVKGE 481
Query: 67 NIE 69
+E
Sbjct: 482 KME 484
>pdb|1TYP|A Chain A, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
pdb|1TYP|B Chain B, Substrate Interactions Between Trypanothione Reductase And
N1-Glutathionylspermidine Disulphide At 0.28-Nm
Resolution
Length = 487
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 116 YDLCVXXXXXXXXXXXKEAASMNKK-VALFDFVTPSQHGT--VWGLGGTCVNVGCIPKKL 172
YDL V AAS++KK VA+ D HG LGGTCVNVGC+PKKL
Sbjct: 5 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL--QKHHGPPHYAALGGTCVNVGCVPKKL 62
Query: 173 FHRASLLNEEATTSDNFGFHMKKSF---TWKTLVDNVQKYI 210
+ + S FG+ + + WK L+ K +
Sbjct: 63 MVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAV 103
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
EI Q A+ + +GA DF IG+HPT AE +
Sbjct: 436 EIIQSVAICLKMGAKISDFYNTIGVHPTSAEEL 468
>pdb|1TYT|A Chain A, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
pdb|1TYT|B Chain B, Crystal And Molecular Structure Of Crithidia Fasciculata
Trypanothione Reductase At 2.6 Angstroms Resolution
Length = 487
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 116 YDLCVXXXXXXXXXXXKEAASMNKK-VALFDFVTPSQHGT--VWGLGGTCVNVGCIPKKL 172
YDL V AAS++KK VA+ D HG LGGTCVNVGC+PKKL
Sbjct: 5 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL--QKHHGPPHYAALGGTCVNVGCVPKKL 62
Query: 173 FHRASLLNEEATTSDNFGFHMKKSF---TWKTLVDNVQKYI 210
+ + S FG+ + + WK L+ K +
Sbjct: 63 MVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAV 103
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
EI Q A+ + +GA DF IG+HPT AE +
Sbjct: 436 EIIQSVAICLKMGAKISDFYNTIGVHPTSAEEL 468
>pdb|1FEA|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|C Chain C, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEA|D Chain D, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.2 Angstrom Resolution
pdb|1FEB|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEB|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 2.0 Angstrom Resolution
pdb|1FEC|A Chain A, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
pdb|1FEC|B Chain B, Unliganded Crithidia Fasciculata Trypanothione Reductase
At 1.7 Angstrom Resolution
Length = 490
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 116 YDLCVXXXXXXXXXXXKEAASMNKK-VALFDFVTPSQHGT--VWGLGGTCVNVGCIPKKL 172
YDL V AAS++KK VA+ D HG LGGTCVNVGC+PKKL
Sbjct: 4 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL--QKHHGPPHYAALGGTCVNVGCVPKKL 61
Query: 173 FHRASLLNEEATTSDNFGFHMKKSF---TWKTLVDNVQKYI 210
+ + S FG+ + + WK L+ K +
Sbjct: 62 MVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAV 102
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
EI Q A+ + +GA DF IG+HPT AE +
Sbjct: 435 EIIQSVAICLKMGAKISDFYNTIGVHPTSAEEL 467
>pdb|2TPR|A Chain A, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
pdb|2TPR|B Chain B, X-ray Structure Of Trypanothione Reductase From Crithidia
Fasciculata At 2.4 Angstroms Resolution
Length = 490
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Query: 116 YDLCVXXXXXXXXXXXKEAASMNKK-VALFDFVTPSQHGT--VWGLGGTCVNVGCIPKKL 172
YDL V AAS++KK VA+ D HG LGGTCVNVGC+PKKL
Sbjct: 4 YDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL--QKHHGPPHYAALGGTCVNVGCVPKKL 61
Query: 173 FHRASLLNEEATTSDNFGFHMKKSF---TWKTLVDNVQKYI 210
+ + S FG+ + + WK L+ K +
Sbjct: 62 MVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAV 102
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 26 EITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
EI Q A+ + +GA D IG+HPT AE +
Sbjct: 435 EIIQSVAICLKMGAKISDVYNTIGVHPTSAEEL 467
>pdb|1EBD|A Chain A, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
pdb|1EBD|B Chain B, Dihydrolipoamide Dehydrogenase Complexed With The Binding
Domain Of The Dihydrolipoamide Acetylase
Length = 455
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 158 LGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMK-------KSFTWKTLVDNVQKYI 210
LGG C+NVGCIP K AS E+A S+ G + K WK V +
Sbjct: 37 LGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAKVQEWKASV------V 90
Query: 211 RXXXXXXXXXXXXXXIDYFNAKAVFVDKHRVKFAGEE--RTVSAQNFIIAVGGRP 263
+ ++ +A FVD + V+ + +T + +N IIA G RP
Sbjct: 91 KKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRP 145
>pdb|1BZL|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
pdb|1BZL|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With Trypanothione, And The
Structure- Based Discovery Of New Natural Product
Inhibitors
Length = 486
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 14/168 (8%)
Query: 116 YDLCVXXXXXXXXXXXKEAASM-NKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFH 174
+DL V AA++ K+VA+ D LGGTCVNVGC+PKKL
Sbjct: 5 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKKLMV 64
Query: 175 RASLLNEEATTSDNFGFHMKKS---FTWKTLVD-NVQKYIRXXXXXXXXXXXXXXIDYFN 230
+ E S FG+ ++ WK L+ + + +++F
Sbjct: 65 TGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSYDEMFRDTEGLEFFL 124
Query: 231 AKAVFVDKHRVKF--------AGEERTVSAQNFIIAVGGRPTYPDIPG 270
K+ V A +ER + ++ ++A G P P+IPG
Sbjct: 125 GWGSLESKNVVNVRESADPASAVKER-LETEHILLASGSWPHMPNIPG 171
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 5 KLGGSEVSTFITAEISS-------------NNAGEITQGYALGVMLGAYKQDFDALIGIH 51
K+ GS+ TF+ I++ +NA EI QG + + L A DF IG+H
Sbjct: 401 KVSGSKYKTFVAKIITNHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVH 460
Query: 52 PTCAEAI------SLSWIKGYNIE 69
PT AE + S ++KG +E
Sbjct: 461 PTSAEELCSMRTPSYYYVKGEKME 484
>pdb|1GXF|A Chain A, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
pdb|1GXF|B Chain B, Crystal Structure Of Trypanosoma Cruzi Trypanothione
Reductase In Complex With The Inhibitor Quinacrine
Mustard
Length = 492
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 14/168 (8%)
Query: 116 YDLCVXXXXXXXXXXXKEAASM-NKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFH 174
+DL V AA++ K+VA+ D LGGTCVNVGC+PKKL
Sbjct: 6 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKKLMV 65
Query: 175 RASLLNEEATTSDNFGFHMKKS---FTWKTLVD-NVQKYIRXXXXXXXXXXXXXXIDYFN 230
+ E S FG+ ++ WK L+ + + +++F
Sbjct: 66 TGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSYDEMFRDTEGLEFFL 125
Query: 231 AKAVFVDKHRVKF--------AGEERTVSAQNFIIAVGGRPTYPDIPG 270
K+ V A +ER + ++ ++A G P P+IPG
Sbjct: 126 GWGSLESKNVVNVRESADPASAVKER-LETEHILLASGSWPHMPNIPG 172
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 5 KLGGSEVSTFITAEISS-------------NNAGEITQGYALGVMLGAYKQDFDALIGIH 51
K+ GS+ TF+ I++ +NA EI QG + + L A DF IG+H
Sbjct: 402 KVSGSKYKTFVAKIITNHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVH 461
Query: 52 PTCAEAI------SLSWIKGYNIE 69
PT AE + S ++KG +E
Sbjct: 462 PTSAEELCSMRTPSYYYVKGEKME 485
>pdb|1AOG|A Chain A, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
pdb|1AOG|B Chain B, Trypanosoma Cruzi Trypanothione Reductase (Oxidized Form)
Length = 485
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 14/168 (8%)
Query: 116 YDLCVXXXXXXXXXXXKEAASM-NKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFH 174
+DL V AA++ K+VA+ D LGGTCVNVGC+PKKL
Sbjct: 4 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKKLMV 63
Query: 175 RASLLNEEATTSDNFGFHMKKS---FTWKTLVD-NVQKYIRXXXXXXXXXXXXXXIDYFN 230
+ E S FG+ ++ WK L+ + + +++F
Sbjct: 64 TGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSYDEMFRDTEGLEFFL 123
Query: 231 AKAVFVDKHRVKF--------AGEERTVSAQNFIIAVGGRPTYPDIPG 270
K+ V A +ER + ++ ++A G P P+IPG
Sbjct: 124 GWGSLESKNVVNVRESADPASAVKER-LETEHILLASGSWPHMPNIPG 170
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 19/84 (22%)
Query: 5 KLGGSEVSTFITAEISS-------------NNAGEITQGYALGVMLGAYKQDFDALIGIH 51
K+ GS+ TF+ I++ +NA EI QG + + L A DF IG+H
Sbjct: 400 KVSGSKYKTFVAKIITNHSDGTVLGVHLLGDNAPEIIQGIGICLKLNAKISDFYNTIGVH 459
Query: 52 PTCAEAI------SLSWIKGYNIE 69
PT AE + S ++KG +E
Sbjct: 460 PTSAEELCSMRTPSYYYVKGEKME 483
>pdb|2QAE|A Chain A, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
pdb|2QAE|B Chain B, Crystal Structure Analysis Of Trypanosoma Cruzi Lipoamide
Dehydrogenase
Length = 468
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 29/130 (22%)
Query: 158 LGGTCVNVGCIPKK-------LFH-------RASLLNEEATTSDNFGFHMKKSFTWKTLV 203
LGGTC+NVGCIP K L+H R L+ E T D+ +K K L
Sbjct: 37 LGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDSAKMQQQKERAVKGLT 96
Query: 204 DNVQKYIRXXXXXXXXXXXXXXIDYFNAKAVFVDKHRVK---FAGEERTVSAQNFIIAVG 260
V+ + + Y+ + F H ++ G++ + + IIA G
Sbjct: 97 GGVEYLFK-----------KNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATG 145
Query: 261 GRPT-YPDIP 269
PT P +P
Sbjct: 146 SEPTELPFLP 155
>pdb|1OJT|A Chain A, Structure Of Dihydrolipoamide Dehydrogenase
Length = 482
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 15/127 (11%)
Query: 158 LGGTCVNVGCIPKK-LFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRXXXXX 216
LGG C+NVGCIP K L H A++++E + N + + L +
Sbjct: 41 LGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGG 100
Query: 217 XXXXXXXXXIDYFNAKAVFVDKHRVKFA-------------GEERTVSAQNFIIAVGGRP 263
+D F+D H ++ + GE++ V+ +N IIA G R
Sbjct: 101 LAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRV 160
Query: 264 T-YPDIP 269
T P IP
Sbjct: 161 TKLPFIP 167
>pdb|1BHY|A Chain A, Low Temperature Middle Resolution Structure Of P64k From
Masc Data
Length = 482
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 15/127 (11%)
Query: 158 LGGTCVNVGCIPKK-LFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRXXXXX 216
LGG C+NVGCIP K L H A++++E + N + + L +
Sbjct: 41 LGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGG 100
Query: 217 XXXXXXXXXIDYFNAKAVFVDKHRVKFA-------------GEERTVSAQNFIIAVGGRP 263
+D F+D H ++ + GE++ V+ +N IIA G R
Sbjct: 101 LAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRV 160
Query: 264 T-YPDIP 269
T P IP
Sbjct: 161 TKLPFIP 167
>pdb|2EQ6|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ6|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8
pdb|2EQ8|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ8|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdp
pdb|2EQ9|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|D Chain D, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|E Chain E, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|G Chain G, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|H Chain H, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|J Chain J, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
pdb|2EQ9|K Chain K, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdb
Length = 464
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Query: 158 LGGTCVNVGCIP-KKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRXXXXX 216
+GG C+NVGCIP K L H A L+ ++ FG K K L + ++
Sbjct: 40 VGGVCLNVGCIPTKALLHAAETLH-HLKVAEGFGLKAKPELDLKKLGGWRDQVVKKLTGG 98
Query: 217 XXXXXXXXXIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRP 263
++ A V V+ GE A++ I+A G P
Sbjct: 99 VGTLLKGNGVELLRGFARLVGPKEVEVGGER--YGAKSLILATGSEP 143
>pdb|3URH|A Chain A, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3URH|B Chain B, Crystal Structure Of A Dihydrolipoamide Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 491
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 65/174 (37%), Gaps = 37/174 (21%)
Query: 116 YDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKK-LFH 174
YDL V +AA + KVA+ + + GGTC+NVGCIP K L H
Sbjct: 26 YDLIVIGSGPGGYVCAIKAAQLGXKVAVVEKRST--------YGGTCLNVGCIPSKALLH 77
Query: 175 RASLLNEEATTSDNFGFHMK------------KSFTWKTLVDNVQKYIRXXXXXXXXXXX 222
+ ++ + G + K T K+ VD V +
Sbjct: 78 ASEXFHQAQHGLEALGVEVANPKLNLQKXXAHKDATVKSNVDGVSFLFK----------- 126
Query: 223 XXXIDYFNAKAVFVDKHRVKFA---GEERTVSAQNFIIAVGGRPTYPDIPGARL 273
ID F + + +V GEE+ + A+N +IA G IPG +
Sbjct: 127 KNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATG--SDVAGIPGVEV 178
>pdb|1ZK7|A Chain A, Crystal Structure Of Tn501 Mera
pdb|1ZX9|A Chain A, Crystal Structure Of Tn501 Mera
Length = 467
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 49/131 (37%), Gaps = 10/131 (7%)
Query: 147 VTPSQHGTVWGLGGTCVNVGCIPKKLFHRA---SLLNEEATTSDNFGFHMKKSFTWKTLV 203
VT + GT+ GGTCVNVGC+P K+ RA + L E+ + K L
Sbjct: 30 VTLIERGTI---GGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDRSKLLA 86
Query: 204 DNVQKYIRXXXXX-XXXXXXXXXIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAV 259
+ I + +A F D + G ER V ++A
Sbjct: 87 QQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVAT 146
Query: 260 GGRPTYPDIPG 270
G P P IPG
Sbjct: 147 GASPAVPPIPG 157
>pdb|1LVL|A Chain A, The Refined Structure Of Pseudomonas Putida Lipoamide
Dehydrogenase Complexed With Nad+ At 2.45 Angstroms
Resolution
Length = 458
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 158 LGGTCVNVGCIPKKL-------FHRASLLNEEATTSDNFG---FHMKKSFTWKT-LVDNV 206
LGGTC+N+GCIP K FH+AS E + + + +S WK +VD +
Sbjct: 39 LGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLDIGQSVAWKDGIVDRL 98
Query: 207 QKYIRXXXXXXXXXXXXXXIDYFNAKAVFVDKHRVK 242
+ + K V VD R++
Sbjct: 99 TTGVAALLKKHGVKVVHGWAKVLDGKQVEVDGQRIQ 134
>pdb|1DXL|A Chain A, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|B Chain B, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|C Chain C, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
pdb|1DXL|D Chain D, Dihydrolipoamide Dehydrogenase Of Glycine Decarboxylase
From Pisum Sativum
Length = 470
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 5/108 (4%)
Query: 158 LGGTCVNVGCIPKK-LFHRASLLNEEATTSDNFGFHMKK-SFTWKTLVDNVQKYIRXXXX 215
LGGTC+NVGCIP K L H + + +E + N G + ++ K +
Sbjct: 41 LGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLAAMMGQKDKAVSNLTR 100
Query: 216 XXXXXXXXXXIDYFNAKAVFVDKHRVK---FAGEERTVSAQNFIIAVG 260
+ Y FV + GE V ++ IIA G
Sbjct: 101 GIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATG 148
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 10 EVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWIKGYN 67
E + I + NAGE+ A+ + A +D + HPT +EAI + + Y+
Sbjct: 408 ETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKEAAMATYD 465
>pdb|1JEH|A Chain A, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1JEH|B Chain B, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1V59|A Chain A, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
pdb|1V59|B Chain B, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
Length = 478
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 17/126 (13%)
Query: 158 LGGTCVNVGCIPKK-LFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQK----YIRX 212
LGGTC+NVGCIP K L + + L ++ T + G + K V N QK ++
Sbjct: 40 LGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDI--KINVANFQKAKDDAVKQ 97
Query: 213 XXXXXXXXXXXXXIDYFNAKAVFVDKHRVKFA---------GEERTVSAQNFIIAVGGRP 263
+ Y+ F D+ +++ E+ + +N I+A G
Sbjct: 98 LTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV 157
Query: 264 T-YPDI 268
T +P I
Sbjct: 158 TPFPGI 163
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 9 SEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWIKGYN 67
S+ + A I NAGE+ L + GA +D + HPT +EA + + Y+
Sbjct: 415 SKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAFKEANMAAYD 473
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
Length = 477
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 50/123 (40%), Gaps = 11/123 (8%)
Query: 158 LGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFH--MKKSFTWK--TLVDNVQKYIRXX 213
LGGTC+NVGCIP K +S EA + F H K T +V ++
Sbjct: 44 LGGTCLNVGCIPSKALLDSSYKYHEA--KEAFKVHGIEAKGVTIDVPAMVARKANIVKNL 101
Query: 214 XXXXXXXXXXXXIDYFNAKAVFVDKHRVKFA---GEERTVSAQNFIIAVGGRPTYPDIPG 270
+ F + +V+ G+ + + A+N IIA G RP +IP
Sbjct: 102 TGGIATLFKANGVTSFEGHGKLLANKQVEVTGLDGKTQVLEAENVIIASGSRPV--EIPP 159
Query: 271 ARL 273
A L
Sbjct: 160 APL 162
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 23 NAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
+A E+ Q A+G+ G +D ++ HPT +EA+
Sbjct: 422 SAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEAL 457
>pdb|3LAD|A Chain A, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
pdb|3LAD|B Chain B, Refined Crystal Structure Of Lipoamide Dehydrogenase From
Azotobacter Vinelandii At 2.2 Angstroms Resolution. A
Comparison With The Structure Of Glutathione Reductase
Length = 476
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 13/146 (8%)
Query: 133 EAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFH 192
++A + K AL + + T LGGTC+NVGCIP K +S EA ++F H
Sbjct: 21 KSAQLGLKTALIEKYKGKEGKTA--LGGTCLNVGCIPSKALLDSSYKFHEA--HESFKLH 76
Query: 193 ----MKKSFTWKTLVDNVQKYIRXXXXXXXXXXXXXXIDYFNAKAVFVDKHRVKFA---G 245
+ + T++ + +R + F + +V+ G
Sbjct: 77 GISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADG 136
Query: 246 EERTVSAQNFIIAVGGRPTYPDIPGA 271
+ + +N I+A G +P +IP A
Sbjct: 137 SSQVLDTENVILASGSKPV--EIPPA 160
>pdb|3II4|A Chain A, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
pdb|3II4|B Chain B, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
Length = 466
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 6/119 (5%)
Query: 159 GGTCVNVGCIPKK-LFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRXXXXXX 217
GG C+NVGCIP K L A L++ + FG + +F + D +K
Sbjct: 40 GGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGIAYDRSRKVAEGRVAGV 99
Query: 218 XXXXXXXXIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDIPGARL 273
I + F D + + G +V+ N IIA G +PG L
Sbjct: 100 HFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRL--VPGTSL 156
>pdb|1MO9|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MO9|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MOK|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|C Chain C, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|D Chain D, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|2C3D|A Chain A, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3D|B Chain B, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3C|A Chain A, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|2C3C|B Chain B, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|3Q6J|A Chain A, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
pdb|3Q6J|B Chain B, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
Length = 523
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 9/119 (7%)
Query: 158 LGGTCVNVGCIPKKLFHR-ASLLNEEATTSDNFGF--HMKKSFTWKTLVDNVQKYIRXXX 214
LGG+C + C+P LF A+ L T S + F +K K +VD + + R
Sbjct: 78 LGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVGIKEVVD-LFRAGRNGP 136
Query: 215 XXXXXXXXXXXIDY---FNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPDIPG 270
++ N A +D H V+ AG + A+N I+AVG P D+PG
Sbjct: 137 HGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAAG--KVFKAKNLILAVGAGPGTLDVPG 193
>pdb|2A8X|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2A8X|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
Length = 464
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 46/119 (38%), Gaps = 6/119 (5%)
Query: 159 GGTCVNVGCIPKK-LFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRXXXXXX 217
GG C+NVGCIP K L A L++ + FG + +F + D +K
Sbjct: 38 GGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGIAYDRSRKVAEGRVAGV 97
Query: 218 XXXXXXXXIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDIPGARL 273
I + F D + + G +V+ N IIA G +PG L
Sbjct: 98 HFLXKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRL--VPGTSL 154
>pdb|1ZMC|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMC|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nad+
pdb|1ZMD|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|1ZMD|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
Complexed To Nadh
pdb|2F5Z|A Chain A, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|B Chain B, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|C Chain C, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|D Chain D, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|E Chain E, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|F Chain F, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|G Chain G, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|H Chain H, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|I Chain I, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
pdb|2F5Z|J Chain J, Crystal Structure Of Human Dihydrolipoamide Dehydrogenase
(E3) Complexed To The E3-Binding Domain Of Human E3-
Binding Protein
Length = 474
Score = 34.3 bits (77), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 7/118 (5%)
Query: 158 LGGTCVNVGCIPKKLFHRASLLNEEATTSD--NFGFHMKK-SFTWKTLVDNVQKYIRXXX 214
LGGTC+NVGCIP K S A +D + G M + +++ ++
Sbjct: 41 LGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLNLDKMMEQKSTAVKALT 100
Query: 215 XXXXXXXXXXXIDYFNAKAVFVDKHRV---KFAGEERTVSAQNFIIAVGGRPT-YPDI 268
+ + N K++V K G + + +N +IA G T +P I
Sbjct: 101 GGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGI 158
>pdb|3RNM|A Chain A, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|B Chain B, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|C Chain C, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|D Chain D, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
Length = 495
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 7/118 (5%)
Query: 158 LGGTCVNVGCIPKKLFHRASLLNEEATTSD--NFGFHMKK-SFTWKTLVDNVQKYIRXXX 214
LGGTC+NVGCIP K S A D + G M + +++ ++
Sbjct: 62 LGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALT 121
Query: 215 XXXXXXXXXXXIDYFNAKAVFVDKHRV---KFAGEERTVSAQNFIIAVGGRPT-YPDI 268
+ + N K++V K G + + +N +IA G T +P I
Sbjct: 122 GGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGI 179
>pdb|1ZY8|A Chain A, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|B Chain B, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|C Chain C, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|D Chain D, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|E Chain E, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|F Chain F, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|G Chain G, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|H Chain H, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|I Chain I, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|J Chain J, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex
Length = 474
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 7/118 (5%)
Query: 158 LGGTCVNVGCIPKKLFHRASLLNEEATTSD--NFGFHMKK-SFTWKTLVDNVQKYIRXXX 214
LGGTC+NVGCIP K S A D + G M + +++ ++
Sbjct: 41 LGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALT 100
Query: 215 XXXXXXXXXXXIDYFNAKAVFVDKHRV---KFAGEERTVSAQNFIIAVGGRPT-YPDI 268
+ + N K++V K G + + +N +IA G T +P I
Sbjct: 101 GGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGI 158
>pdb|2EQ7|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2EQ7|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From Thermus
Thermophilus Hb8 With Psbdo
pdb|2YQU|A Chain A, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
pdb|2YQU|B Chain B, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
Length = 455
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 51/152 (33%), Gaps = 10/152 (6%)
Query: 116 YDLCVXXXXXXXXXXXKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHR 175
YDL V AA + KV + + LGGTC+ VGCIP K
Sbjct: 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVE--------KEKALGGTCLRVGCIPSKALLE 53
Query: 176 ASLLNEEATTSDNFGFHMKK-SFTWKTLVDNVQKYIRXXXXXXXXXXXXXXIDYFNAKAV 234
+ EA G +K L+ + K ++ I A
Sbjct: 54 TTERIYEAKKG-LLGAKVKGVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTAR 112
Query: 235 FVDKHRVKFAGEERTVSAQNFIIAVGGRPTYP 266
F+ + +V + A+ +IA G P P
Sbjct: 113 FLSERKVLVEETGEELEARYILIATGSAPLIP 144
>pdb|1XDI|A Chain A, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
pdb|1XDI|B Chain B, Crystal Structure Of Lpda (Rv3303c) From Mycobacterium
Tuberculosis
Length = 499
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 48/135 (35%), Gaps = 19/135 (14%)
Query: 157 GLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM---KKSFTWKTLVDNVQKYIRXX 213
G+GG V C+P K F ++ L E + + GFH+ + + V+
Sbjct: 38 GIGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKISLPQIHARVKTLAAAQ 97
Query: 214 XXXXXXXXXXXXIDYFNAKAVFVD------KHRVKFAGEERTVS---AQNFIIAVGGRP- 263
+ + +D +HR+K + + S A ++A G P
Sbjct: 98 SADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPR 157
Query: 264 ----TYPDIPGARLL 274
PD G R+L
Sbjct: 158 ILPSAQPD--GERIL 170
>pdb|2CDU|A Chain A, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
pdb|2CDU|B Chain B, The Crystal Structure Of Water-Forming Nad(P)h Oxidase
From Lactobacillus Sanfranciscensis
Length = 452
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 243 FAGEERTVSAQNFIIAVGGRPTYPDIPG 270
EE+T + I+ G +PT P IPG
Sbjct: 97 ITNEEKTEAYDKLIMTTGSKPTVPPIPG 124
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,348,760
Number of Sequences: 62578
Number of extensions: 307548
Number of successful extensions: 761
Number of sequences better than 100.0: 66
Number of HSP's better than 100.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 586
Number of HSP's gapped (non-prelim): 127
length of query: 296
length of database: 14,973,337
effective HSP length: 98
effective length of query: 198
effective length of database: 8,840,693
effective search space: 1750457214
effective search space used: 1750457214
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)