Query psy7665
Match_columns 296
No_of_seqs 361 out of 2865
Neff 9.5
Searched_HMMs 29240
Date Sat Aug 17 00:17:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7665.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7665hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b1b_A TRXR, thioredoxin reduc 99.9 2.2E-26 7.4E-31 215.4 17.2 181 114-294 41-232 (542)
2 3qfa_A Thioredoxin reductase 1 99.9 1.4E-23 4.6E-28 196.5 17.6 181 114-294 31-219 (519)
3 3dgz_A Thioredoxin reductase 2 99.9 1.8E-23 6E-28 194.4 17.3 181 114-294 5-194 (488)
4 3dgh_A TRXR-1, thioredoxin red 99.9 2.5E-23 8.5E-28 193.2 18.1 181 114-294 8-196 (483)
5 2x8g_A Thioredoxin glutathione 99.9 6.8E-22 2.3E-26 188.1 17.2 206 87-294 81-295 (598)
6 2wpf_A Trypanothione reductase 99.9 2.5E-21 8.5E-26 180.2 16.8 180 114-294 6-200 (495)
7 2r9z_A Glutathione amide reduc 99.9 3.5E-21 1.2E-25 177.8 17.3 168 115-294 4-175 (463)
8 3lad_A Dihydrolipoamide dehydr 99.9 4.8E-21 1.7E-25 177.5 16.4 179 114-294 2-189 (476)
9 3ic9_A Dihydrolipoamide dehydr 99.9 3E-21 1E-25 179.5 14.8 170 114-294 7-183 (492)
10 1ges_A Glutathione reductase; 99.9 3.8E-21 1.3E-25 176.9 15.4 168 115-294 4-176 (450)
11 3dk9_A Grase, GR, glutathione 99.9 5.4E-21 1.9E-25 177.2 16.5 169 114-294 19-196 (478)
12 1fec_A Trypanothione reductase 99.9 9.8E-21 3.3E-25 176.0 17.6 179 115-294 3-196 (490)
13 4dna_A Probable glutathione re 99.9 5.3E-21 1.8E-25 176.6 15.6 169 114-294 4-179 (463)
14 3o0h_A Glutathione reductase; 99.9 1E-20 3.4E-25 175.7 16.5 167 115-293 26-199 (484)
15 1onf_A GR, grase, glutathione 99.9 6.7E-21 2.3E-25 177.5 14.8 170 115-294 2-185 (500)
16 3urh_A Dihydrolipoyl dehydroge 99.8 2.2E-20 7.7E-25 173.6 18.0 171 114-294 24-207 (491)
17 1zmd_A Dihydrolipoyl dehydroge 99.8 2.1E-20 7.1E-25 173.1 17.5 173 114-294 5-187 (474)
18 1lvl_A Dihydrolipoamide dehydr 99.8 3E-20 1E-24 171.3 17.9 169 114-294 4-180 (458)
19 2hqm_A GR, grase, glutathione 99.8 2.2E-20 7.5E-25 173.2 16.2 171 114-294 10-194 (479)
20 3l8k_A Dihydrolipoyl dehydroge 99.8 2.5E-20 8.5E-25 172.3 15.8 166 115-294 4-181 (466)
21 2qae_A Lipoamide, dihydrolipoy 99.8 3.6E-20 1.2E-24 171.3 15.7 172 115-294 2-183 (468)
22 1ebd_A E3BD, dihydrolipoamide 99.8 7.9E-20 2.7E-24 168.4 17.9 172 114-294 2-179 (455)
23 2yqu_A 2-oxoglutarate dehydrog 99.8 3.8E-20 1.3E-24 170.5 15.4 168 116-294 2-176 (455)
24 2eq6_A Pyruvate dehydrogenase 99.8 6.6E-20 2.3E-24 169.3 16.4 168 115-294 6-178 (464)
25 1dxl_A Dihydrolipoamide dehydr 99.8 8.2E-20 2.8E-24 168.9 16.1 173 114-294 5-186 (470)
26 1zk7_A HGII, reductase, mercur 99.8 1.2E-19 4.1E-24 167.7 17.1 171 115-294 4-185 (467)
27 1ojt_A Surface protein; redox- 99.8 5E-19 1.7E-23 164.2 18.4 172 114-294 5-194 (482)
28 1xdi_A RV3303C-LPDA; reductase 99.8 4.4E-19 1.5E-23 165.2 16.8 171 115-294 2-191 (499)
29 2a8x_A Dihydrolipoyl dehydroge 99.8 5.1E-19 1.7E-23 163.3 16.3 171 115-294 3-180 (464)
30 1v59_A Dihydrolipoamide dehydr 99.8 2.1E-18 7.2E-23 159.8 15.3 170 115-294 5-192 (478)
31 1mo9_A ORF3; nucleotide bindin 99.8 2.6E-18 8.7E-23 160.9 13.4 166 114-294 42-223 (523)
32 4gcm_A TRXR, thioredoxin reduc 99.7 3.1E-17 1.1E-21 143.4 12.6 139 114-294 5-154 (312)
33 4a5l_A Thioredoxin reductase; 99.7 5.1E-17 1.8E-21 141.9 8.3 146 115-294 4-161 (314)
34 4fk1_A Putative thioredoxin re 99.7 2.9E-16 9.9E-21 136.9 10.5 118 113-274 4-128 (304)
35 3uox_A Otemo; baeyer-villiger 99.5 5.2E-14 1.8E-18 132.1 12.7 158 114-294 8-194 (545)
36 3r9u_A Thioredoxin reductase; 99.5 8.7E-14 3E-18 121.1 12.6 139 114-293 3-155 (315)
37 3fbs_A Oxidoreductase; structu 99.5 8.9E-14 3E-18 120.0 12.5 136 115-294 2-150 (297)
38 2q7v_A Thioredoxin reductase; 99.5 1.9E-13 6.4E-18 119.9 14.7 140 114-294 7-161 (325)
39 2gv8_A Monooxygenase; FMO, FAD 99.5 9.3E-14 3.2E-18 127.5 13.0 162 114-294 5-221 (447)
40 2xve_A Flavin-containing monoo 99.5 3.6E-13 1.2E-17 124.1 16.2 160 116-294 3-206 (464)
41 4ap3_A Steroid monooxygenase; 99.5 8.7E-14 3E-18 130.7 11.9 155 114-294 20-200 (549)
42 1fl2_A Alkyl hydroperoxide red 99.5 1.1E-13 3.7E-18 120.5 11.6 136 116-294 2-153 (310)
43 3gwf_A Cyclohexanone monooxyge 99.5 1.4E-13 5E-18 128.9 12.2 155 114-294 7-187 (540)
44 2q0l_A TRXR, thioredoxin reduc 99.5 2.5E-13 8.6E-18 118.2 12.5 138 116-294 2-152 (311)
45 1w4x_A Phenylacetone monooxyge 99.5 5.1E-14 1.8E-18 132.3 8.5 158 114-294 15-195 (542)
46 3itj_A Thioredoxin reductase 1 99.5 1.1E-13 3.7E-18 121.7 9.8 147 114-294 21-182 (338)
47 3f8d_A Thioredoxin reductase ( 99.5 4.2E-13 1.4E-17 117.1 13.2 138 114-294 14-163 (323)
48 2a87_A TRXR, TR, thioredoxin r 99.5 3.8E-13 1.3E-17 118.5 12.5 140 114-294 13-164 (335)
49 4a9w_A Monooxygenase; baeyer-v 99.5 3.6E-13 1.2E-17 119.1 11.9 151 115-294 3-172 (357)
50 3cty_A Thioredoxin reductase; 99.5 8.1E-13 2.8E-17 115.5 13.9 118 114-273 15-136 (319)
51 1hyu_A AHPF, alkyl hydroperoxi 99.5 6E-13 2E-17 124.4 13.8 138 114-294 211-364 (521)
52 2gqf_A Hypothetical protein HI 99.4 2.6E-13 9E-18 122.7 8.5 142 115-263 4-168 (401)
53 2zbw_A Thioredoxin reductase; 99.4 1.6E-12 5.5E-17 114.3 13.4 142 115-294 5-161 (335)
54 1trb_A Thioredoxin reductase; 99.4 6.7E-13 2.3E-17 115.9 10.7 140 114-294 4-154 (320)
55 3lzw_A Ferredoxin--NADP reduct 99.4 1.1E-12 3.6E-17 115.0 11.9 123 114-274 6-137 (332)
56 1vdc_A NTR, NADPH dependent th 99.4 1E-12 3.5E-17 115.4 11.7 124 114-273 7-134 (333)
57 3ab1_A Ferredoxin--NADP reduct 99.4 3.7E-12 1.3E-16 113.3 13.5 142 115-294 14-172 (360)
58 3kd9_A Coenzyme A disulfide re 99.4 2.8E-12 9.7E-17 117.6 12.2 136 116-294 4-157 (449)
59 3oc4_A Oxidoreductase, pyridin 99.3 7.4E-12 2.5E-16 115.0 12.2 137 116-294 3-156 (452)
60 1ps9_A 2,4-dienoyl-COA reducta 99.3 3.4E-12 1.2E-16 122.8 10.4 126 114-294 372-503 (671)
61 2v3a_A Rubredoxin reductase; a 99.3 1.4E-12 4.9E-17 117.2 7.1 136 115-294 4-154 (384)
62 3klj_A NAD(FAD)-dependent dehy 99.3 3.4E-12 1.1E-16 114.8 8.2 135 114-294 8-155 (385)
63 3v76_A Flavoprotein; structura 99.3 1.2E-11 4E-16 112.4 11.3 143 114-263 26-187 (417)
64 2vdc_G Glutamate synthase [NAD 99.3 4.1E-12 1.4E-16 116.6 8.0 108 114-272 121-229 (456)
65 1nhp_A NADH peroxidase; oxidor 99.3 4.4E-12 1.5E-16 116.3 6.6 137 116-294 1-158 (447)
66 2bc0_A NADH oxidase; flavoprot 99.3 1.3E-11 4.4E-16 114.5 9.3 117 114-272 34-158 (490)
67 3iwa_A FAD-dependent pyridine 99.2 3.2E-11 1.1E-15 111.3 11.5 143 116-294 4-168 (472)
68 3ces_A MNMG, tRNA uridine 5-ca 99.2 5.6E-11 1.9E-15 112.3 13.3 135 114-272 27-190 (651)
69 2cdu_A NADPH oxidase; flavoenz 99.2 1.4E-11 4.9E-16 113.0 9.0 139 116-294 1-158 (452)
70 4eqs_A Coenzyme A disulfide re 99.2 3.1E-12 1.1E-16 117.0 4.3 137 117-294 2-156 (437)
71 3k30_A Histamine dehydrogenase 99.2 5.7E-12 1.9E-16 121.6 6.3 126 114-292 390-530 (690)
72 3ef6_A Toluene 1,2-dioxygenase 99.2 5.9E-12 2E-16 114.2 6.0 134 116-294 3-152 (410)
73 2cul_A Glucose-inhibited divis 99.2 2.8E-11 9.4E-16 101.2 9.6 124 115-271 3-133 (232)
74 1xhc_A NADH oxidase /nitrite r 99.2 4.9E-12 1.7E-16 113.0 5.3 133 115-294 8-152 (367)
75 3d1c_A Flavin-containing putat 99.2 1E-10 3.5E-15 104.0 13.9 136 115-270 4-149 (369)
76 1o94_A Tmadh, trimethylamine d 99.2 9.6E-12 3.3E-16 120.6 7.7 132 114-292 388-535 (729)
77 3sx6_A Sulfide-quinone reducta 99.2 7.7E-12 2.6E-16 114.4 6.4 112 116-273 5-122 (437)
78 1lqt_A FPRA; NADP+ derivative, 99.2 4.3E-12 1.5E-16 116.6 4.6 108 115-272 3-118 (456)
79 2gag_A Heterotetrameric sarcos 99.2 1E-10 3.5E-15 116.6 14.4 138 114-294 127-293 (965)
80 3cgb_A Pyridine nucleotide-dis 99.2 1.6E-11 5.3E-16 113.7 7.9 136 116-294 37-195 (480)
81 1cjc_A Protein (adrenodoxin re 99.2 4.1E-12 1.4E-16 116.9 3.7 114 115-278 6-123 (460)
82 2gqw_A Ferredoxin reductase; f 99.2 1.2E-11 4.1E-16 112.1 6.8 133 114-294 6-154 (408)
83 3oz2_A Digeranylgeranylglycero 99.2 5.6E-12 1.9E-16 112.9 4.5 45 114-160 3-47 (397)
84 3lxd_A FAD-dependent pyridine 99.2 4.7E-12 1.6E-16 115.0 4.0 115 114-272 8-128 (415)
85 1q1r_A Putidaredoxin reductase 99.2 1.8E-11 6.1E-16 111.7 7.3 136 115-294 4-158 (431)
86 3ntd_A FAD-dependent pyridine 99.2 5.7E-11 2E-15 112.0 10.1 137 116-294 2-160 (565)
87 3s5w_A L-ornithine 5-monooxyge 99.2 1.3E-10 4.6E-15 106.7 12.4 35 114-150 29-68 (463)
88 2zxi_A TRNA uridine 5-carboxym 99.2 1.2E-10 3.9E-15 109.8 11.7 32 114-145 26-57 (637)
89 3fg2_P Putative rubredoxin red 99.2 1.8E-11 6.1E-16 110.8 5.5 113 116-272 2-119 (404)
90 3ics_A Coenzyme A-disulfide re 99.2 2.2E-11 7.5E-16 115.4 6.1 139 114-294 35-196 (588)
91 3h8l_A NADH oxidase; membrane 99.2 1.9E-11 6.6E-16 110.6 5.2 114 116-273 2-123 (409)
92 1y56_A Hypothetical protein PH 99.1 1.1E-10 3.6E-15 108.4 9.8 136 114-293 107-258 (493)
93 3cp8_A TRNA uridine 5-carboxym 99.1 1.3E-10 4.6E-15 109.7 10.4 32 114-145 20-51 (641)
94 2i0z_A NAD(FAD)-utilizing dehy 99.1 3.7E-10 1.3E-14 103.5 11.9 144 114-263 25-191 (447)
95 2ywl_A Thioredoxin reductase r 99.1 2E-10 6.7E-15 91.9 8.7 109 116-267 2-114 (180)
96 1y0p_A Fumarate reductase flav 99.1 1.2E-09 4.1E-14 103.1 15.1 38 114-153 125-162 (571)
97 1rp0_A ARA6, thiazole biosynth 99.1 7.4E-10 2.5E-14 95.3 12.2 35 114-150 38-73 (284)
98 3hyw_A Sulfide-quinone reducta 99.1 2.1E-11 7.3E-16 111.2 2.6 112 116-274 3-119 (430)
99 1gte_A Dihydropyrimidine dehyd 99.1 6.4E-11 2.2E-15 118.8 6.1 114 114-277 186-305 (1025)
100 2e5v_A L-aspartate oxidase; ar 99.1 3.5E-10 1.2E-14 104.3 10.6 150 117-268 1-181 (472)
101 4b63_A L-ornithine N5 monooxyg 99.1 1.8E-10 6.2E-15 107.1 8.7 57 239-295 186-256 (501)
102 3vrd_B FCCB subunit, flavocyto 99.1 3.3E-11 1.1E-15 108.8 3.2 112 116-274 3-119 (401)
103 3k30_A Histamine dehydrogenase 99.1 2E-11 6.8E-16 117.8 1.2 161 50-265 448-626 (690)
104 1qo8_A Flavocytochrome C3 fuma 99.1 7.6E-10 2.6E-14 104.4 11.7 40 113-154 119-158 (566)
105 3dme_A Conserved exported prot 99.1 3.3E-09 1.1E-13 93.9 15.1 32 115-146 4-35 (369)
106 4g6h_A Rotenone-insensitive NA 99.1 1.7E-10 6E-15 107.1 6.8 32 114-145 41-72 (502)
107 4at0_A 3-ketosteroid-delta4-5a 99.0 2.9E-09 9.8E-14 99.2 14.8 38 113-152 39-76 (510)
108 2bry_A NEDD9 interacting prote 99.0 4.4E-10 1.5E-14 104.3 9.2 135 114-270 91-237 (497)
109 3nix_A Flavoprotein/dehydrogen 99.0 1.2E-09 4.2E-14 98.8 11.2 33 114-146 4-36 (421)
110 1chu_A Protein (L-aspartate ox 99.0 1.9E-09 6.4E-14 101.1 11.9 32 114-146 7-38 (540)
111 2h88_A Succinate dehydrogenase 99.0 1.7E-09 5.8E-14 102.7 11.1 33 114-146 17-49 (621)
112 3h28_A Sulfide-quinone reducta 99.0 1.2E-10 4.2E-15 106.1 3.1 106 116-267 3-113 (430)
113 3nlc_A Uncharacterized protein 99.0 7.3E-10 2.5E-14 103.6 8.3 32 114-145 106-137 (549)
114 3cgv_A Geranylgeranyl reductas 99.0 2.1E-09 7.3E-14 96.3 11.0 38 114-153 3-40 (397)
115 4b1b_A TRXR, thioredoxin reduc 99.0 3.8E-10 1.3E-14 105.5 5.8 61 3-63 461-522 (542)
116 3jsk_A Cypbp37 protein; octame 99.0 5.9E-10 2E-14 97.8 6.4 35 114-150 78-114 (344)
117 3ntd_A FAD-dependent pyridine 99.0 3.5E-09 1.2E-13 99.8 11.8 142 2-145 396-555 (565)
118 3ic9_A Dihydrolipoamide dehydr 99.0 1.2E-09 4E-14 101.4 8.2 62 2-63 403-464 (492)
119 3kkj_A Amine oxidase, flavin-c 99.0 5.3E-10 1.8E-14 94.0 5.3 40 115-162 2-41 (336)
120 1d4d_A Flavocytochrome C fumar 98.9 4.6E-09 1.6E-13 99.1 12.1 39 114-154 125-163 (572)
121 2wdq_A Succinate dehydrogenase 98.9 2E-09 6.7E-14 101.9 9.5 33 114-146 6-38 (588)
122 3alj_A 2-methyl-3-hydroxypyrid 98.9 5.6E-09 1.9E-13 93.4 12.0 34 115-150 11-44 (379)
123 3urh_A Dihydrolipoyl dehydroge 98.9 1.2E-09 4.2E-14 101.2 7.9 62 2-63 421-482 (491)
124 3lad_A Dihydrolipoamide dehydr 98.9 1.2E-09 4.2E-14 100.8 7.6 62 2-63 401-462 (476)
125 2yqu_A 2-oxoglutarate dehydrog 98.9 1.2E-08 4E-13 93.6 13.3 134 75-267 127-268 (455)
126 4dna_A Probable glutathione re 98.9 9.7E-10 3.3E-14 101.1 6.1 60 2-61 390-449 (463)
127 3dgz_A Thioredoxin reductase 2 98.9 1.3E-09 4.6E-14 100.9 7.0 60 2-61 414-474 (488)
128 3dk9_A Grase, GR, glutathione 98.9 1E-09 3.6E-14 101.3 6.1 58 2-59 418-475 (478)
129 3nyc_A D-arginine dehydrogenas 98.9 8.2E-08 2.8E-12 85.4 18.2 34 114-150 8-41 (381)
130 3dgh_A TRXR-1, thioredoxin red 98.9 1.1E-09 3.8E-14 101.2 6.0 59 2-60 414-473 (483)
131 2bs2_A Quinol-fumarate reducta 98.9 3.7E-08 1.2E-12 94.2 16.3 33 114-146 4-36 (660)
132 1kf6_A Fumarate reductase flav 98.9 4E-09 1.4E-13 100.1 9.5 33 114-146 4-38 (602)
133 1m6i_A Programmed cell death p 98.9 2.3E-10 7.8E-15 106.2 1.0 135 114-270 10-151 (493)
134 3l8k_A Dihydrolipoyl dehydroge 98.9 2.4E-09 8.3E-14 98.5 7.8 64 2-65 394-457 (466)
135 3ps9_A TRNA 5-methylaminomethy 98.9 1.9E-08 6.5E-13 96.8 14.3 31 115-145 272-302 (676)
136 3atr_A Conserved archaeal prot 98.9 1.5E-08 5E-13 93.0 12.8 32 115-146 6-37 (453)
137 1ryi_A Glycine oxidase; flavop 98.9 1.4E-08 4.7E-13 90.6 12.3 34 112-145 14-47 (382)
138 3ics_A Coenzyme A-disulfide re 98.9 3E-09 1E-13 100.7 7.9 138 2-145 412-572 (588)
139 1xhc_A NADH oxidase /nitrite r 98.9 6E-09 2E-13 93.0 9.3 158 50-265 65-236 (367)
140 2r9z_A Glutathione amide reduc 98.9 2.5E-08 8.5E-13 91.7 13.7 134 75-266 128-267 (463)
141 1y56_B Sarcosine oxidase; dehy 98.9 4.5E-08 1.5E-12 87.3 15.0 32 115-146 5-36 (382)
142 3e1t_A Halogenase; flavoprotei 98.9 6.1E-08 2.1E-12 90.2 16.3 33 114-146 6-38 (512)
143 1o94_A Tmadh, trimethylamine d 98.9 4.2E-10 1.4E-14 109.2 1.5 80 65-145 467-560 (729)
144 3i3l_A Alkylhalidase CMLS; fla 98.9 4.2E-08 1.4E-12 92.7 15.2 32 114-145 22-53 (591)
145 1k0i_A P-hydroxybenzoate hydro 98.9 1.8E-08 6.1E-13 90.5 12.1 31 115-145 2-32 (394)
146 1yvv_A Amine oxidase, flavin-c 98.9 2.1E-08 7.1E-13 87.8 12.2 33 116-150 3-35 (336)
147 2uzz_A N-methyl-L-tryptophan o 98.9 3.8E-08 1.3E-12 87.4 14.1 31 115-145 2-32 (372)
148 3gyx_A Adenylylsulfate reducta 98.9 1.2E-08 4E-13 97.6 11.3 33 114-146 21-59 (662)
149 2oln_A NIKD protein; flavoprot 98.9 2.2E-08 7.5E-13 89.9 12.4 31 115-145 4-34 (397)
150 3ihg_A RDME; flavoenzyme, anth 98.8 5.4E-08 1.9E-12 91.0 15.5 32 114-145 4-35 (535)
151 1ps9_A 2,4-dienoyl-COA reducta 98.8 2.9E-10 1E-14 109.3 -0.0 86 55-143 435-522 (671)
152 3rp8_A Flavoprotein monooxygen 98.8 1.4E-08 4.7E-13 91.7 10.9 32 114-145 22-53 (407)
153 3pvc_A TRNA 5-methylaminomethy 98.8 5.9E-08 2E-12 93.6 15.7 32 114-145 263-294 (689)
154 2qa1_A PGAE, polyketide oxygen 98.8 8.8E-09 3E-13 95.6 9.6 33 113-145 9-41 (500)
155 3dje_A Fructosyl amine: oxygen 98.8 5.4E-08 1.8E-12 88.6 14.7 35 114-150 5-40 (438)
156 3o0h_A Glutathione reductase; 98.8 2.5E-09 8.4E-14 99.0 5.8 60 2-61 410-469 (484)
157 2gag_B Heterotetrameric sarcos 98.8 1.9E-08 6.3E-13 90.5 11.4 33 114-146 20-54 (405)
158 3qfa_A Thioredoxin reductase 1 98.8 2.6E-09 8.7E-14 99.7 5.8 60 2-61 442-502 (519)
159 3fmw_A Oxygenase; mithramycin, 98.8 3.4E-08 1.2E-12 93.1 13.4 32 114-145 48-79 (570)
160 3fpz_A Thiazole biosynthetic e 98.8 2.1E-09 7.1E-14 94.3 4.6 50 114-171 64-115 (326)
161 4eqs_A Coenzyme A disulfide re 98.8 1.5E-08 5.1E-13 92.5 10.2 130 76-265 103-242 (437)
162 2gmh_A Electron transfer flavo 98.8 2.3E-08 8E-13 94.5 11.6 40 113-154 33-78 (584)
163 3ka7_A Oxidoreductase; structu 98.8 1.1E-07 3.8E-12 86.0 15.6 33 116-150 1-33 (425)
164 3g5s_A Methylenetetrahydrofola 98.8 6.8E-09 2.3E-13 92.0 7.0 53 116-170 2-54 (443)
165 2gf3_A MSOX, monomeric sarcosi 98.8 2.4E-07 8.1E-12 82.7 17.0 31 115-145 3-33 (389)
166 3fbs_A Oxidoreductase; structu 98.8 1.9E-08 6.5E-13 86.3 9.1 127 75-266 98-229 (297)
167 1jnr_A Adenylylsulfate reducta 98.8 1.1E-07 3.7E-12 91.0 15.1 33 114-146 21-57 (643)
168 1ojt_A Surface protein; redox- 98.8 1E-08 3.5E-13 94.8 7.4 62 2-63 407-468 (482)
169 1nhp_A NADH peroxidase; oxidor 98.8 2.9E-08 1E-12 90.8 10.5 136 76-267 102-250 (447)
170 3c4n_A Uncharacterized protein 98.8 3.5E-08 1.2E-12 89.1 10.7 33 114-146 35-69 (405)
171 1ges_A Glutathione reductase; 98.8 7.3E-09 2.5E-13 94.9 6.1 58 2-59 390-447 (450)
172 2qa2_A CABE, polyketide oxygen 98.8 7.3E-08 2.5E-12 89.4 12.8 33 113-145 10-42 (499)
173 2xdo_A TETX2 protein; tetracyc 98.8 1E-07 3.6E-12 85.7 13.5 46 114-162 25-70 (398)
174 2gqw_A Ferredoxin reductase; f 98.8 4.2E-08 1.4E-12 88.7 10.9 134 75-265 99-241 (408)
175 2x3n_A Probable FAD-dependent 98.7 5E-08 1.7E-12 87.7 11.1 31 115-145 6-36 (399)
176 3klj_A NAD(FAD)-dependent dehy 98.7 4.2E-10 1.4E-14 101.1 -3.1 99 47-145 64-176 (385)
177 1ebd_A E3BD, dihydrolipoamide 98.7 1.6E-08 5.4E-13 92.8 7.3 62 2-63 391-452 (455)
178 3c96_A Flavin-containing monoo 98.7 1.6E-07 5.6E-12 84.7 13.8 31 115-145 4-35 (410)
179 3ef6_A Toluene 1,2-dioxygenase 98.7 4.2E-08 1.4E-12 88.8 9.7 156 53-265 65-243 (410)
180 2bc0_A NADH oxidase; flavoprot 98.7 9.2E-08 3.2E-12 88.5 12.2 136 75-266 135-294 (490)
181 2hqm_A GR, grase, glutathione 98.7 1.2E-08 4E-13 94.3 6.1 58 2-59 411-468 (479)
182 2aqj_A Tryptophan halogenase, 98.7 1.1E-07 3.9E-12 88.9 12.9 31 115-145 5-38 (538)
183 2qae_A Lipoamide, dihydrolipoy 98.7 2.3E-08 8E-13 92.0 8.0 62 2-63 398-459 (468)
184 2a8x_A Dihydrolipoyl dehydroge 98.7 2.3E-08 7.9E-13 91.9 7.9 62 2-63 394-455 (464)
185 2vou_A 2,6-dihydroxypyridine h 98.7 1.6E-07 5.4E-12 84.4 13.3 32 114-145 4-35 (397)
186 3k7m_X 6-hydroxy-L-nicotine ox 98.7 1.1E-08 3.7E-13 93.0 5.6 47 116-170 2-50 (431)
187 2gjc_A Thiazole biosynthetic e 98.7 2.1E-08 7.1E-13 87.5 6.8 35 114-150 64-100 (326)
188 3da1_A Glycerol-3-phosphate de 98.7 1E-07 3.6E-12 89.6 12.1 32 114-145 17-48 (561)
189 1fec_A Trypanothione reductase 98.7 1.4E-08 4.8E-13 94.0 6.1 57 3-59 411-468 (490)
190 2v3a_A Rubredoxin reductase; a 98.7 4.3E-08 1.5E-12 87.8 9.0 134 75-265 99-245 (384)
191 2wpf_A Trypanothione reductase 98.7 1.4E-08 4.8E-13 94.2 5.8 57 3-59 416-472 (495)
192 1onf_A GR, grase, glutathione 98.7 2E-08 6.9E-13 93.2 6.8 58 3-60 437-494 (500)
193 1dxl_A Dihydrolipoamide dehydr 98.7 2.9E-08 1E-12 91.3 7.8 61 3-63 401-461 (470)
194 1trb_A Thioredoxin reductase; 98.7 1.3E-07 4.5E-12 82.0 11.3 134 75-266 102-250 (320)
195 2eq6_A Pyruvate dehydrogenase 98.7 3.1E-08 1.1E-12 91.1 7.5 62 2-63 391-452 (464)
196 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 4.1E-08 1.4E-12 86.4 8.0 33 116-150 2-37 (342)
197 3s5w_A L-ornithine 5-monooxyge 98.7 1.7E-07 5.8E-12 85.9 12.3 71 75-145 178-259 (463)
198 2zbw_A Thioredoxin reductase; 98.7 3.1E-07 1.1E-11 80.3 13.2 135 75-266 107-255 (335)
199 3cgb_A Pyridine nucleotide-dis 98.7 1.8E-07 6.1E-12 86.3 12.1 135 75-266 138-285 (480)
200 3lxd_A FAD-dependent pyridine 98.6 2.1E-07 7.1E-12 84.2 12.2 135 75-265 105-253 (415)
201 1zmd_A Dihydrolipoyl dehydroge 98.6 3.9E-08 1.3E-12 90.6 7.5 62 2-63 403-464 (474)
202 1mo9_A ORF3; nucleotide bindin 98.6 4.1E-08 1.4E-12 91.6 7.6 62 2-63 452-515 (523)
203 1xdi_A RV3303C-LPDA; reductase 98.6 4.8E-08 1.6E-12 90.6 7.8 62 2-63 401-462 (499)
204 2r0c_A REBC; flavin adenine di 98.6 3.9E-07 1.3E-11 85.5 14.1 35 114-150 25-59 (549)
205 4gde_A UDP-galactopyranose mut 98.6 1.9E-08 6.4E-13 93.4 5.0 42 113-162 8-50 (513)
206 1zk7_A HGII, reductase, mercur 98.6 5.3E-08 1.8E-12 89.5 7.8 62 2-63 392-453 (467)
207 3oc4_A Oxidoreductase, pyridin 98.6 2.5E-08 8.6E-13 91.4 5.6 57 2-58 370-428 (452)
208 2pyx_A Tryptophan halogenase; 98.6 1.3E-07 4.5E-12 88.3 10.4 31 115-145 7-49 (526)
209 2q7v_A Thioredoxin reductase; 98.6 5.4E-07 1.8E-11 78.5 13.7 70 75-145 109-182 (325)
210 3fg2_P Putative rubredoxin red 98.6 2.6E-07 8.8E-12 83.3 12.0 134 75-265 96-243 (404)
211 3gwf_A Cyclohexanone monooxyge 98.6 1.5E-06 5.1E-11 81.3 17.4 69 76-145 134-208 (540)
212 1pj5_A N,N-dimethylglycine oxi 98.6 4.5E-07 1.5E-11 89.3 14.5 31 115-145 4-35 (830)
213 2xve_A Flavin-containing monoo 98.6 2.7E-07 9.3E-12 84.8 12.1 70 75-145 152-227 (464)
214 1lvl_A Dihydrolipoamide dehydr 98.6 5.8E-08 2E-12 89.1 7.6 61 3-63 389-449 (458)
215 2gv8_A Monooxygenase; FMO, FAD 98.6 3.3E-07 1.1E-11 83.7 12.3 70 75-145 163-243 (447)
216 1fl2_A Alkyl hydroperoxide red 98.6 7E-07 2.4E-11 77.1 13.5 70 75-145 101-174 (310)
217 2qcu_A Aerobic glycerol-3-phos 98.6 1E-06 3.6E-11 81.7 15.5 32 115-146 3-34 (501)
218 3f8d_A Thioredoxin reductase ( 98.6 4.8E-07 1.7E-11 78.3 12.0 70 75-145 111-184 (323)
219 3axb_A Putative oxidoreductase 98.6 1.5E-06 5E-11 79.3 15.4 32 114-145 22-54 (448)
220 2dkh_A 3-hydroxybenzoate hydro 98.6 4.3E-07 1.5E-11 86.8 12.3 32 114-145 31-63 (639)
221 2weu_A Tryptophan 5-halogenase 98.6 3.9E-07 1.3E-11 84.7 11.7 32 115-146 2-36 (511)
222 3cty_A Thioredoxin reductase; 98.6 8.2E-07 2.8E-11 77.1 13.1 69 76-145 113-185 (319)
223 4a5l_A Thioredoxin reductase; 98.6 2E-07 6.9E-12 80.7 9.0 72 74-145 106-182 (314)
224 2q0l_A TRXR, thioredoxin reduc 98.6 4.6E-07 1.6E-11 78.3 11.2 70 75-145 100-173 (311)
225 1q1r_A Putidaredoxin reductase 98.5 3.9E-07 1.3E-11 82.9 11.1 70 75-145 100-179 (431)
226 3lzw_A Ferredoxin--NADP reduct 98.5 9.6E-07 3.3E-11 76.8 13.2 70 76-145 110-184 (332)
227 1v59_A Dihydrolipoamide dehydr 98.5 1.2E-07 4.2E-12 87.4 7.8 62 2-63 408-469 (478)
228 3ab1_A Ferredoxin--NADP reduct 98.5 8.9E-07 3E-11 78.3 12.9 134 75-265 117-265 (360)
229 3iwa_A FAD-dependent pyridine 98.5 5.4E-08 1.9E-12 89.6 5.0 60 2-61 387-450 (472)
230 1vdc_A NTR, NADPH dependent th 98.5 7.2E-07 2.5E-11 77.8 11.9 71 75-145 110-189 (333)
231 3kd9_A Coenzyme A disulfide re 98.5 6.7E-08 2.3E-12 88.4 5.4 57 2-58 373-430 (449)
232 2rgh_A Alpha-glycerophosphate 98.5 2.1E-06 7E-11 81.0 15.7 33 114-146 31-63 (571)
233 2x8g_A Thioredoxin glutathione 98.5 7.2E-08 2.5E-12 91.5 5.6 59 3-61 522-581 (598)
234 3itj_A Thioredoxin reductase 1 98.5 6.6E-07 2.2E-11 78.0 11.2 71 75-145 128-203 (338)
235 3r9u_A Thioredoxin reductase; 98.5 5E-07 1.7E-11 78.0 10.2 70 75-145 104-177 (315)
236 3uox_A Otemo; baeyer-villiger 98.5 5.9E-06 2E-10 77.3 18.2 71 75-145 133-215 (545)
237 4hb9_A Similarities with proba 98.5 1.6E-07 5.5E-12 84.2 7.1 30 117-146 3-32 (412)
238 2e4g_A Tryptophan halogenase; 98.5 8.3E-07 2.9E-11 83.3 12.1 32 115-146 25-59 (550)
239 4dgk_A Phytoene dehydrogenase; 98.5 6.7E-08 2.3E-12 89.5 4.5 39 116-162 2-40 (501)
240 4gcm_A TRXR, thioredoxin reduc 98.5 1.9E-06 6.4E-11 74.6 12.8 70 75-145 102-175 (312)
241 2a87_A TRXR, TR, thioredoxin r 98.5 6.8E-07 2.3E-11 78.3 10.0 70 75-145 112-185 (335)
242 4g6h_A Rotenone-insensitive NA 98.5 5.9E-07 2E-11 83.3 10.0 135 75-264 155-333 (502)
243 2bcg_G Secretory pathway GDP d 98.4 1.7E-07 5.7E-12 85.9 5.5 41 114-162 10-50 (453)
244 1pn0_A Phenol 2-monooxygenase; 98.4 2.7E-06 9.2E-11 81.6 14.0 33 114-146 7-44 (665)
245 4ap3_A Steroid monooxygenase; 98.4 4E-06 1.4E-10 78.6 14.5 70 76-145 146-221 (549)
246 3d1c_A Flavin-containing putat 98.4 1.6E-06 5.3E-11 76.8 10.7 67 76-145 130-196 (369)
247 3nrn_A Uncharacterized protein 98.4 2.4E-07 8.1E-12 83.9 5.1 38 117-162 2-39 (421)
248 1rsg_A FMS1 protein; FAD bindi 98.4 2.6E-07 8.8E-12 86.0 5.3 35 114-150 7-42 (516)
249 2e1m_A L-glutamate oxidase; L- 98.4 2.9E-07 9.9E-12 82.0 5.2 42 114-163 43-85 (376)
250 2gag_A Heterotetrameric sarcos 98.4 1.2E-06 3.9E-11 87.6 9.8 72 74-145 238-314 (965)
251 3hdq_A UDP-galactopyranose mut 98.4 3.4E-07 1.2E-11 82.2 5.4 41 114-162 28-68 (397)
252 2b9w_A Putative aminooxidase; 98.4 3.8E-07 1.3E-11 82.5 5.7 35 114-150 5-40 (424)
253 2cdu_A NADPH oxidase; flavoenz 98.3 3.6E-07 1.2E-11 83.6 5.4 57 3-59 376-434 (452)
254 1hyu_A AHPF, alkyl hydroperoxi 98.3 3.4E-06 1.1E-10 78.6 11.9 70 75-145 312-385 (521)
255 1v0j_A UDP-galactopyranose mut 98.3 3.3E-07 1.1E-11 82.5 4.9 40 115-162 7-47 (399)
256 1s3e_A Amine oxidase [flavin-c 98.3 4.1E-07 1.4E-11 84.7 5.4 34 115-150 4-37 (520)
257 3nks_A Protoporphyrinogen oxid 98.3 4E-07 1.4E-11 83.6 4.9 33 116-150 3-37 (477)
258 2yg5_A Putrescine oxidase; oxi 98.3 4.9E-07 1.7E-11 82.5 5.3 35 114-150 4-38 (453)
259 1m6i_A Programmed cell death p 98.3 2.3E-06 7.8E-11 79.2 9.9 135 75-266 130-285 (493)
260 1i8t_A UDP-galactopyranose mut 98.3 4.6E-07 1.6E-11 80.7 4.9 39 116-162 2-40 (367)
261 2ivd_A PPO, PPOX, protoporphyr 98.3 6E-07 2.1E-11 82.5 5.1 41 114-162 15-55 (478)
262 2jae_A L-amino acid oxidase; o 98.3 7.2E-07 2.4E-11 82.3 5.5 35 114-150 10-44 (489)
263 2vvm_A Monoamine oxidase N; FA 98.3 6.8E-07 2.3E-11 82.6 5.3 34 115-150 39-72 (495)
264 3i6d_A Protoporphyrinogen oxid 98.2 4E-07 1.4E-11 83.3 3.5 34 115-150 5-44 (470)
265 4a9w_A Monooxygenase; baeyer-v 98.2 6.1E-06 2.1E-10 72.2 10.4 68 76-145 119-192 (357)
266 1sez_A Protoporphyrinogen oxid 98.2 1.1E-06 3.9E-11 81.3 5.2 35 115-151 13-47 (504)
267 3lov_A Protoporphyrinogen oxid 98.2 1.1E-06 3.9E-11 80.6 4.9 34 115-150 4-39 (475)
268 2bi7_A UDP-galactopyranose mut 98.2 1.4E-06 4.7E-11 78.1 5.2 33 116-150 4-36 (384)
269 3p1w_A Rabgdi protein; GDI RAB 98.1 1.8E-06 6E-11 79.2 5.3 41 114-162 19-59 (475)
270 1d5t_A Guanine nucleotide diss 98.1 2E-06 6.7E-11 78.3 5.6 41 114-162 5-45 (433)
271 4dsg_A UDP-galactopyranose mut 98.1 2E-06 6.8E-11 79.4 5.6 35 114-150 8-43 (484)
272 1c0p_A D-amino acid oxidase; a 98.1 2.9E-06 9.9E-11 75.1 6.5 33 114-146 5-37 (363)
273 2iid_A L-amino-acid oxidase; f 98.1 1.9E-06 6.3E-11 79.7 4.8 35 114-150 32-66 (498)
274 3ihm_A Styrene monooxygenase A 98.1 2E-06 6.8E-11 78.2 4.6 33 114-146 21-53 (430)
275 3g3e_A D-amino-acid oxidase; F 98.0 3.2E-06 1.1E-10 74.5 4.3 44 117-162 2-52 (351)
276 1b37_A Protein (polyamine oxid 98.0 4.7E-06 1.6E-10 76.6 5.2 34 115-150 4-38 (472)
277 3pl8_A Pyranose 2-oxidase; sub 98.0 5.5E-06 1.9E-10 78.8 5.4 35 114-150 45-79 (623)
278 2vdc_G Glutamate synthase [NAD 98.0 1.9E-05 6.4E-10 72.3 8.7 32 114-145 263-295 (456)
279 3c4a_A Probable tryptophan hyd 98.0 4.4E-06 1.5E-10 74.5 4.3 29 117-145 2-32 (381)
280 1cjc_A Protein (adrenodoxin re 98.0 0.00013 4.4E-09 66.8 14.0 70 76-145 93-196 (460)
281 1gte_A Dihydropyrimidine dehyd 98.0 3.2E-05 1.1E-09 77.7 10.9 30 116-145 333-363 (1025)
282 2z3y_A Lysine-specific histone 98.0 6.2E-06 2.1E-10 79.1 5.3 35 114-150 106-140 (662)
283 1lqt_A FPRA; NADP+ derivative, 97.9 0.00016 5.6E-09 66.0 14.1 70 76-145 95-198 (456)
284 2xag_A Lysine-specific histone 97.9 9.7E-06 3.3E-10 79.5 5.5 38 114-153 277-314 (852)
285 4fk1_A Putative thioredoxin re 97.9 5.1E-05 1.7E-09 65.3 9.4 70 75-145 103-177 (304)
286 4gut_A Lysine-specific histone 97.9 1.6E-05 5.4E-10 77.4 6.4 37 114-152 335-371 (776)
287 3sx6_A Sulfide-quinone reducta 97.8 0.00012 4E-09 66.6 10.1 47 217-263 214-269 (437)
288 3t37_A Probable dehydrogenase; 97.7 1.6E-05 5.6E-10 73.9 4.2 34 114-147 16-50 (526)
289 1w4x_A Phenylacetone monooxyge 97.7 0.0033 1.1E-07 58.6 19.6 71 75-145 140-216 (542)
290 1kdg_A CDH, cellobiose dehydro 97.7 2.5E-05 8.6E-10 73.1 4.8 34 114-147 6-39 (546)
291 3h8l_A NADH oxidase; membrane 97.7 0.0001 3.5E-09 66.3 8.4 46 217-264 224-271 (409)
292 1ju2_A HydroxynitrIle lyase; f 97.6 2.8E-05 9.5E-10 72.7 3.8 32 114-146 25-56 (536)
293 3q9t_A Choline dehydrogenase a 97.6 4.2E-05 1.4E-09 72.0 4.3 34 114-147 5-39 (577)
294 3qvp_A Glucose oxidase; oxidor 97.5 6.9E-05 2.4E-09 70.5 4.4 34 114-147 18-52 (583)
295 3h28_A Sulfide-quinone reducta 97.4 0.00025 8.6E-09 64.1 7.2 47 217-263 206-256 (430)
296 1vg0_A RAB proteins geranylger 97.4 0.00014 4.8E-09 68.9 5.5 41 114-162 7-47 (650)
297 1n4w_A CHOD, cholesterol oxida 97.4 0.00014 4.9E-09 67.3 5.3 34 114-147 4-37 (504)
298 3fim_B ARYL-alcohol oxidase; A 97.4 8E-05 2.7E-09 69.9 3.2 33 115-147 2-35 (566)
299 1coy_A Cholesterol oxidase; ox 97.3 0.00017 6E-09 66.8 4.8 34 114-147 10-43 (507)
300 4b63_A L-ornithine N5 monooxyg 97.3 0.00073 2.5E-08 62.5 8.8 69 76-145 201-278 (501)
301 1gpe_A Protein (glucose oxidas 97.3 0.00025 8.4E-09 67.0 5.3 34 114-147 23-57 (587)
302 2jbv_A Choline oxidase; alcoho 97.2 0.00027 9.2E-09 66.1 4.6 34 114-147 12-46 (546)
303 3ayj_A Pro-enzyme of L-phenyla 97.1 0.0002 7E-09 68.6 3.1 31 115-145 56-94 (721)
304 2g1u_A Hypothetical protein TM 96.3 0.0051 1.7E-07 47.2 4.9 31 115-145 19-49 (155)
305 3fwz_A Inner membrane protein 96.2 0.007 2.4E-07 45.5 5.5 31 115-145 7-37 (140)
306 3eag_A UDP-N-acetylmuramate:L- 96.2 0.0063 2.1E-07 52.9 5.5 30 116-145 5-35 (326)
307 1lss_A TRK system potassium up 96.0 0.0078 2.7E-07 44.8 4.7 30 116-145 5-34 (140)
308 3llv_A Exopolyphosphatase-rela 95.9 0.0094 3.2E-07 44.7 4.8 30 116-145 7-36 (141)
309 1id1_A Putative potassium chan 95.8 0.011 3.8E-07 45.0 5.1 30 116-145 4-33 (153)
310 3ic5_A Putative saccharopine d 95.6 0.014 4.8E-07 41.9 4.7 31 115-145 5-36 (118)
311 3hyw_A Sulfide-quinone reducta 95.5 0.094 3.2E-06 47.1 10.8 48 217-264 206-257 (430)
312 3dfz_A SIRC, precorrin-2 dehyd 95.3 0.016 5.6E-07 47.3 4.5 32 114-145 30-61 (223)
313 1y56_A Hypothetical protein PH 95.3 0.023 7.9E-07 52.2 6.0 55 75-129 205-264 (493)
314 2hmt_A YUAA protein; RCK, KTN, 95.2 0.018 6.1E-07 42.9 4.3 29 117-145 8-36 (144)
315 3c85_A Putative glutathione-re 95.1 0.019 6.4E-07 45.1 4.3 30 116-145 40-70 (183)
316 1kyq_A Met8P, siroheme biosynt 95.0 0.015 5.2E-07 49.1 3.6 31 115-145 13-43 (274)
317 2x5o_A UDP-N-acetylmuramoylala 94.8 0.018 6.2E-07 52.1 3.8 31 116-146 6-36 (439)
318 3l4b_C TRKA K+ channel protien 94.8 0.027 9.1E-07 45.7 4.4 29 117-145 2-30 (218)
319 3lk7_A UDP-N-acetylmuramoylala 94.7 0.026 9E-07 51.2 4.6 31 115-145 9-39 (451)
320 3ado_A Lambda-crystallin; L-gu 94.7 0.03 1E-06 48.3 4.6 29 117-145 8-36 (319)
321 4dio_A NAD(P) transhydrogenase 94.5 0.039 1.3E-06 49.2 4.9 30 116-145 191-220 (405)
322 3i83_A 2-dehydropantoate 2-red 94.4 0.04 1.4E-06 47.5 4.8 30 116-145 3-32 (320)
323 3hn2_A 2-dehydropantoate 2-red 94.3 0.044 1.5E-06 47.1 4.8 30 116-145 3-32 (312)
324 1jw9_B Molybdopterin biosynthe 93.8 0.045 1.6E-06 45.5 3.8 30 116-145 32-62 (249)
325 4e12_A Diketoreductase; oxidor 93.8 0.057 2E-06 45.7 4.5 29 117-145 6-34 (283)
326 2y0c_A BCEC, UDP-glucose dehyd 93.8 0.054 1.9E-06 49.5 4.6 30 116-145 9-38 (478)
327 1f0y_A HCDH, L-3-hydroxyacyl-C 93.7 0.059 2E-06 46.0 4.5 29 117-145 17-45 (302)
328 3vrd_B FCCB subunit, flavocyto 93.6 0.092 3.1E-06 46.5 5.7 43 219-263 210-258 (401)
329 3p2y_A Alanine dehydrogenase/p 93.6 0.054 1.8E-06 47.8 4.0 31 115-145 184-214 (381)
330 3vtf_A UDP-glucose 6-dehydroge 93.6 0.064 2.2E-06 48.4 4.5 31 115-145 21-51 (444)
331 1ks9_A KPA reductase;, 2-dehyd 93.5 0.079 2.7E-06 44.6 4.9 29 117-145 2-30 (291)
332 1lld_A L-lactate dehydrogenase 93.5 0.067 2.3E-06 46.0 4.5 30 116-145 8-39 (319)
333 2v6b_A L-LDH, L-lactate dehydr 93.4 0.072 2.4E-06 45.7 4.5 29 117-145 2-32 (304)
334 3gg2_A Sugar dehydrogenase, UD 93.4 0.069 2.4E-06 48.4 4.6 30 116-145 3-32 (450)
335 3g17_A Similar to 2-dehydropan 93.4 0.06 2.1E-06 45.8 4.0 30 116-145 3-32 (294)
336 1x13_A NAD(P) transhydrogenase 93.3 0.073 2.5E-06 47.5 4.6 31 115-145 172-202 (401)
337 3ghy_A Ketopantoate reductase 93.3 0.078 2.7E-06 46.0 4.6 30 116-145 4-33 (335)
338 2raf_A Putative dinucleotide-b 93.3 0.098 3.4E-06 42.1 4.9 31 115-145 19-49 (209)
339 1l7d_A Nicotinamide nucleotide 93.2 0.091 3.1E-06 46.6 4.9 31 115-145 172-202 (384)
340 1pzg_A LDH, lactate dehydrogen 93.1 0.068 2.3E-06 46.4 3.9 30 116-145 10-40 (331)
341 3hwr_A 2-dehydropantoate 2-red 93.1 0.084 2.9E-06 45.5 4.5 30 115-144 19-48 (318)
342 2hjr_A Malate dehydrogenase; m 93.1 0.085 2.9E-06 45.7 4.5 30 116-145 15-45 (328)
343 4g65_A TRK system potassium up 93.0 0.047 1.6E-06 49.7 2.8 30 116-145 4-33 (461)
344 2a9f_A Putative malic enzyme ( 92.9 0.084 2.9E-06 46.6 4.2 32 114-145 187-219 (398)
345 2dpo_A L-gulonate 3-dehydrogen 92.9 0.1 3.4E-06 45.1 4.6 30 116-145 7-36 (319)
346 1t2d_A LDH-P, L-lactate dehydr 92.8 0.098 3.4E-06 45.2 4.5 30 116-145 5-35 (322)
347 3oj0_A Glutr, glutamyl-tRNA re 92.8 0.05 1.7E-06 40.9 2.3 31 115-145 21-51 (144)
348 3gvi_A Malate dehydrogenase; N 92.8 0.11 3.7E-06 45.0 4.6 30 116-145 8-38 (324)
349 2ew2_A 2-dehydropantoate 2-red 92.8 0.1 3.5E-06 44.4 4.5 29 117-145 5-33 (316)
350 1ur5_A Malate dehydrogenase; o 92.7 0.11 3.7E-06 44.7 4.6 30 116-145 3-33 (309)
351 1pjq_A CYSG, siroheme synthase 92.7 0.1 3.4E-06 47.5 4.6 31 115-145 12-42 (457)
352 1vl6_A Malate oxidoreductase; 92.7 0.1 3.6E-06 46.0 4.4 32 114-145 191-223 (388)
353 1pjc_A Protein (L-alanine dehy 92.6 0.11 3.8E-06 45.6 4.7 30 116-145 168-197 (361)
354 3ego_A Probable 2-dehydropanto 92.6 0.11 3.9E-06 44.4 4.6 29 116-145 3-31 (307)
355 3g79_A NDP-N-acetyl-D-galactos 92.6 0.11 3.8E-06 47.4 4.7 30 116-145 19-50 (478)
356 1z82_A Glycerol-3-phosphate de 92.5 0.13 4.3E-06 44.6 4.8 32 114-145 13-44 (335)
357 4ffl_A PYLC; amino acid, biosy 92.5 0.12 4E-06 45.3 4.7 29 117-145 3-31 (363)
358 1mv8_A GMD, GDP-mannose 6-dehy 92.5 0.1 3.4E-06 47.1 4.3 29 117-145 2-30 (436)
359 3ldh_A Lactate dehydrogenase; 92.5 0.13 4.4E-06 44.6 4.7 31 115-145 21-53 (330)
360 2eez_A Alanine dehydrogenase; 92.4 0.13 4.5E-06 45.3 4.8 31 115-145 166-196 (369)
361 3tl2_A Malate dehydrogenase; c 92.2 0.13 4.6E-06 44.2 4.5 30 116-145 9-39 (315)
362 2vhw_A Alanine dehydrogenase; 92.2 0.14 4.8E-06 45.3 4.7 31 115-145 168-198 (377)
363 1y6j_A L-lactate dehydrogenase 92.1 0.14 4.8E-06 44.1 4.6 30 116-145 8-39 (318)
364 3l9w_A Glutathione-regulated p 92.1 0.15 5.2E-06 45.6 4.9 29 117-145 6-34 (413)
365 2ewd_A Lactate dehydrogenase,; 92.1 0.11 3.8E-06 44.7 3.9 30 116-145 5-35 (317)
366 4a7p_A UDP-glucose dehydrogena 92.1 0.15 5.3E-06 46.1 4.9 30 116-145 9-38 (446)
367 1zcj_A Peroxisomal bifunctiona 92.0 0.13 4.4E-06 46.8 4.3 29 117-145 39-67 (463)
368 1bg6_A N-(1-D-carboxylethyl)-L 91.9 0.15 5.1E-06 44.4 4.5 30 116-145 5-34 (359)
369 3h8v_A Ubiquitin-like modifier 91.8 0.14 4.8E-06 43.6 4.1 32 114-145 35-67 (292)
370 3dtt_A NADP oxidoreductase; st 91.8 0.2 6.8E-06 41.3 5.0 32 114-145 18-49 (245)
371 1guz_A Malate dehydrogenase; o 91.8 0.16 5.3E-06 43.6 4.5 29 117-145 2-32 (310)
372 4aj2_A L-lactate dehydrogenase 91.8 0.19 6.6E-06 43.5 5.0 32 114-145 18-51 (331)
373 3rui_A Ubiquitin-like modifier 91.7 0.17 5.8E-06 44.0 4.6 31 115-145 34-65 (340)
374 2i6t_A Ubiquitin-conjugating e 91.7 0.13 4.6E-06 44.0 3.9 30 116-145 15-46 (303)
375 1zud_1 Adenylyltransferase THI 91.7 0.17 5.7E-06 42.1 4.4 30 116-145 29-59 (251)
376 3pef_A 6-phosphogluconate dehy 91.7 0.18 6.1E-06 42.6 4.7 29 117-145 3-31 (287)
377 3k6j_A Protein F01G10.3, confi 91.6 0.16 5.5E-06 46.1 4.5 30 116-145 55-84 (460)
378 3fi9_A Malate dehydrogenase; s 91.5 0.22 7.5E-06 43.4 5.1 31 115-145 8-41 (343)
379 2vns_A Metalloreductase steap3 91.5 0.25 8.4E-06 39.9 5.1 30 116-145 29-58 (215)
380 1zej_A HBD-9, 3-hydroxyacyl-CO 91.5 0.18 6.1E-06 43.0 4.4 30 115-145 12-41 (293)
381 1nyt_A Shikimate 5-dehydrogena 91.5 0.21 7.4E-06 41.8 4.9 31 115-145 119-149 (271)
382 3k96_A Glycerol-3-phosphate de 91.4 0.18 6.1E-06 44.2 4.5 30 116-145 30-59 (356)
383 3doj_A AT3G25530, dehydrogenas 91.4 0.19 6.4E-06 43.1 4.6 30 116-145 22-51 (310)
384 1txg_A Glycerol-3-phosphate de 91.4 0.15 5E-06 44.0 3.9 29 117-145 2-30 (335)
385 1leh_A Leucine dehydrogenase; 91.3 0.19 6.7E-06 44.1 4.6 32 114-145 172-203 (364)
386 3qha_A Putative oxidoreductase 91.3 0.18 6.3E-06 42.8 4.4 30 116-145 16-45 (296)
387 3g0o_A 3-hydroxyisobutyrate de 91.3 0.21 7.2E-06 42.5 4.8 30 116-145 8-37 (303)
388 3pid_A UDP-glucose 6-dehydroge 91.3 0.16 5.6E-06 45.6 4.2 29 116-145 37-65 (432)
389 3ond_A Adenosylhomocysteinase; 91.3 0.19 6.5E-06 45.8 4.6 32 114-145 264-295 (488)
390 3p7m_A Malate dehydrogenase; p 91.2 0.22 7.5E-06 43.0 4.8 30 116-145 6-36 (321)
391 3pqe_A L-LDH, L-lactate dehydr 91.1 0.19 6.5E-06 43.5 4.3 30 116-145 6-37 (326)
392 1a5z_A L-lactate dehydrogenase 91.1 0.17 5.7E-06 43.7 3.9 29 117-145 2-32 (319)
393 3vku_A L-LDH, L-lactate dehydr 91.1 0.19 6.4E-06 43.5 4.2 31 115-145 9-41 (326)
394 1dlj_A UDP-glucose dehydrogena 91.0 0.16 5.5E-06 45.3 3.8 28 117-145 2-29 (402)
395 3hn7_A UDP-N-acetylmuramate-L- 91.0 0.27 9.2E-06 45.5 5.5 30 116-145 20-50 (524)
396 1jay_A Coenzyme F420H2:NADP+ o 90.9 0.26 8.9E-06 39.3 4.8 29 117-145 2-31 (212)
397 3ojo_A CAP5O; rossmann fold, c 90.9 0.2 6.9E-06 45.1 4.3 31 115-145 11-41 (431)
398 3phh_A Shikimate dehydrogenase 90.8 0.29 9.8E-06 41.1 5.0 32 115-146 118-149 (269)
399 3d0o_A L-LDH 1, L-lactate dehy 90.8 0.2 6.8E-06 43.1 4.1 30 116-145 7-38 (317)
400 3pdu_A 3-hydroxyisobutyrate de 90.8 0.19 6.6E-06 42.4 4.0 29 117-145 3-31 (287)
401 1oju_A MDH, malate dehydrogena 90.8 0.19 6.4E-06 42.8 3.9 29 117-145 2-32 (294)
402 1hyh_A L-hicdh, L-2-hydroxyiso 90.7 0.19 6.4E-06 43.1 3.9 29 117-145 3-33 (309)
403 2h78_A Hibadh, 3-hydroxyisobut 90.6 0.25 8.5E-06 42.0 4.6 29 117-145 5-33 (302)
404 1evy_A Glycerol-3-phosphate de 90.6 0.17 5.9E-06 44.3 3.6 29 117-145 17-45 (366)
405 3c7a_A Octopine dehydrogenase; 90.6 0.17 5.7E-06 45.1 3.5 29 117-145 4-33 (404)
406 3gvp_A Adenosylhomocysteinase 90.5 0.25 8.6E-06 44.2 4.6 32 114-145 219-250 (435)
407 4dll_A 2-hydroxy-3-oxopropiona 90.5 0.24 8.2E-06 42.6 4.4 30 116-145 32-61 (320)
408 1y8q_A Ubiquitin-like 1 activa 90.5 0.21 7.1E-06 43.6 4.0 31 115-145 36-67 (346)
409 3d4o_A Dipicolinate synthase s 90.5 0.29 9.8E-06 41.6 4.8 32 114-145 154-185 (293)
410 3mog_A Probable 3-hydroxybutyr 90.4 0.26 8.8E-06 45.1 4.7 29 117-145 7-35 (483)
411 2rir_A Dipicolinate synthase, 90.3 0.29 1E-05 41.6 4.8 32 114-145 156-187 (300)
412 3ce6_A Adenosylhomocysteinase; 90.3 0.26 8.8E-06 45.2 4.6 32 114-145 273-304 (494)
413 3gpi_A NAD-dependent epimerase 90.2 0.39 1.3E-05 40.2 5.3 31 116-146 4-34 (286)
414 4ezb_A Uncharacterized conserv 90.1 0.29 9.8E-06 42.1 4.6 31 116-146 25-56 (317)
415 2egg_A AROE, shikimate 5-dehyd 90.1 0.32 1.1E-05 41.4 4.7 31 115-145 141-172 (297)
416 3nep_X Malate dehydrogenase; h 90.0 0.24 8.2E-06 42.6 3.9 29 117-145 2-32 (314)
417 1p77_A Shikimate 5-dehydrogena 89.9 0.26 8.9E-06 41.4 4.0 31 115-145 119-149 (272)
418 2qrj_A Saccharopine dehydrogen 89.9 0.32 1.1E-05 43.1 4.7 31 115-145 214-248 (394)
419 3l6d_A Putative oxidoreductase 89.9 0.37 1.3E-05 41.1 5.1 30 116-145 10-39 (306)
420 3e8x_A Putative NAD-dependent 89.9 0.39 1.3E-05 38.9 5.0 31 115-145 21-52 (236)
421 3ius_A Uncharacterized conserv 89.8 0.3 1E-05 40.8 4.4 30 116-145 6-35 (286)
422 2zqz_A L-LDH, L-lactate dehydr 89.8 0.29 9.8E-06 42.3 4.3 31 115-145 9-41 (326)
423 3q2o_A Phosphoribosylaminoimid 89.7 0.33 1.1E-05 42.9 4.7 31 115-145 14-44 (389)
424 2d4a_B Malate dehydrogenase; a 89.7 0.28 9.5E-06 42.0 4.1 29 117-145 1-30 (308)
425 2uyy_A N-PAC protein; long-cha 89.7 0.35 1.2E-05 41.3 4.8 30 116-145 31-60 (316)
426 2f1k_A Prephenate dehydrogenas 89.7 0.33 1.1E-05 40.6 4.5 29 117-145 2-30 (279)
427 2aef_A Calcium-gated potassium 89.6 0.15 5.2E-06 41.6 2.3 29 116-145 10-38 (234)
428 1ez4_A Lactate dehydrogenase; 89.6 0.3 1E-05 42.1 4.2 30 116-145 6-37 (318)
429 2o3j_A UDP-glucose 6-dehydroge 89.6 0.23 7.9E-06 45.4 3.7 30 116-145 10-41 (481)
430 2pv7_A T-protein [includes: ch 89.6 0.39 1.3E-05 40.8 4.9 30 116-145 22-52 (298)
431 4gsl_A Ubiquitin-like modifier 89.5 0.32 1.1E-05 45.5 4.6 31 115-145 326-357 (615)
432 2gf2_A Hibadh, 3-hydroxyisobut 89.5 0.39 1.3E-05 40.5 4.9 29 117-145 2-30 (296)
433 3vh1_A Ubiquitin-like modifier 89.4 0.31 1.1E-05 45.5 4.4 31 115-145 327-358 (598)
434 2qyt_A 2-dehydropantoate 2-red 89.4 0.23 7.9E-06 42.3 3.4 30 116-145 9-44 (317)
435 2x0j_A Malate dehydrogenase; o 89.4 0.29 9.9E-06 41.6 3.9 29 117-145 2-32 (294)
436 1tt5_B Ubiquitin-activating en 89.4 0.4 1.4E-05 43.2 5.0 30 116-145 41-71 (434)
437 3h5n_A MCCB protein; ubiquitin 89.3 0.3 1E-05 42.7 4.1 31 115-145 118-149 (353)
438 1c1d_A L-phenylalanine dehydro 89.3 0.37 1.3E-05 42.1 4.6 32 114-145 174-205 (355)
439 1vpd_A Tartronate semialdehyde 89.3 0.34 1.2E-05 41.0 4.3 30 116-145 6-35 (299)
440 3ew7_A LMO0794 protein; Q8Y8U8 89.2 0.48 1.6E-05 37.7 5.0 29 117-145 2-31 (221)
441 1yqg_A Pyrroline-5-carboxylate 89.2 0.35 1.2E-05 40.1 4.2 29 117-145 2-31 (263)
442 2cvz_A Dehydrogenase, 3-hydrox 89.1 0.39 1.3E-05 40.3 4.6 28 117-145 3-30 (289)
443 2p4q_A 6-phosphogluconate dehy 89.1 0.45 1.5E-05 43.7 5.2 32 114-145 9-40 (497)
444 4e21_A 6-phosphogluconate dehy 89.0 0.39 1.3E-05 42.1 4.6 30 116-145 23-52 (358)
445 4huj_A Uncharacterized protein 89.0 0.23 8E-06 40.1 3.0 30 116-145 24-54 (220)
446 4gx0_A TRKA domain protein; me 89.0 0.45 1.6E-05 44.3 5.3 30 116-145 349-378 (565)
447 1ldn_A L-lactate dehydrogenase 88.9 0.35 1.2E-05 41.6 4.2 30 116-145 7-38 (316)
448 3h2s_A Putative NADH-flavin re 88.8 0.51 1.7E-05 37.7 4.9 29 117-145 2-31 (224)
449 1mld_A Malate dehydrogenase; o 88.8 0.37 1.3E-05 41.4 4.2 29 117-145 2-33 (314)
450 2q3e_A UDP-glucose 6-dehydroge 88.8 0.28 9.7E-06 44.6 3.7 29 117-145 7-37 (467)
451 3don_A Shikimate dehydrogenase 88.7 0.42 1.4E-05 40.3 4.4 32 114-145 116-148 (277)
452 2g5c_A Prephenate dehydrogenas 88.7 0.42 1.4E-05 40.0 4.5 29 117-145 3-33 (281)
453 2hk9_A Shikimate dehydrogenase 88.7 0.41 1.4E-05 40.1 4.4 31 115-145 129-159 (275)
454 3tnl_A Shikimate dehydrogenase 88.6 0.52 1.8E-05 40.5 5.0 32 114-145 153-185 (315)
455 1yj8_A Glycerol-3-phosphate de 88.6 0.32 1.1E-05 42.8 3.7 30 116-145 22-58 (375)
456 2wtb_A MFP2, fatty acid multif 88.6 0.38 1.3E-05 46.4 4.5 30 116-145 313-342 (725)
457 3h9u_A Adenosylhomocysteinase; 88.6 0.43 1.5E-05 42.8 4.6 32 114-145 210-241 (436)
458 3orq_A N5-carboxyaminoimidazol 88.5 0.46 1.6E-05 41.8 4.8 31 115-145 12-42 (377)
459 3qsg_A NAD-binding phosphogluc 88.5 0.35 1.2E-05 41.4 3.9 30 116-145 25-55 (312)
460 3jyo_A Quinate/shikimate dehyd 88.4 0.55 1.9E-05 39.7 4.9 31 115-145 127-158 (283)
461 3n58_A Adenosylhomocysteinase; 88.3 0.46 1.6E-05 42.7 4.6 32 114-145 246-277 (464)
462 2zyd_A 6-phosphogluconate dehy 88.3 0.5 1.7E-05 43.1 5.0 31 115-145 15-45 (480)
463 3c24_A Putative oxidoreductase 88.3 0.46 1.6E-05 40.0 4.4 30 116-145 12-42 (286)
464 3u62_A Shikimate dehydrogenase 88.2 0.65 2.2E-05 38.5 5.2 31 114-145 108-139 (253)
465 3cky_A 2-hydroxymethyl glutara 88.2 0.45 1.5E-05 40.2 4.4 30 116-145 5-34 (301)
466 2we8_A Xanthine dehydrogenase; 88.1 0.51 1.7E-05 41.8 4.7 30 116-145 205-234 (386)
467 2dvm_A Malic enzyme, 439AA lon 88.1 0.55 1.9E-05 42.2 5.0 32 114-145 185-219 (439)
468 3ggo_A Prephenate dehydrogenas 88.1 0.48 1.6E-05 40.7 4.5 30 116-145 34-65 (314)
469 1x0v_A GPD-C, GPDH-C, glycerol 88.0 0.29 9.8E-06 42.6 3.1 30 116-145 9-45 (354)
470 1edz_A 5,10-methylenetetrahydr 88.0 0.46 1.6E-05 40.9 4.2 32 114-145 176-208 (320)
471 3gt0_A Pyrroline-5-carboxylate 87.9 0.64 2.2E-05 38.2 5.0 29 117-145 4-36 (247)
472 2d5c_A AROE, shikimate 5-dehyd 87.9 0.65 2.2E-05 38.6 5.1 31 114-145 116-146 (263)
473 1hdo_A Biliverdin IX beta redu 87.9 0.65 2.2E-05 36.4 4.9 30 117-146 5-35 (206)
474 4b4o_A Epimerase family protei 87.9 0.63 2.2E-05 39.1 5.1 29 117-145 2-31 (298)
475 3ktd_A Prephenate dehydrogenas 87.8 0.54 1.9E-05 40.8 4.7 30 116-145 9-38 (341)
476 3dfu_A Uncharacterized protein 87.8 0.16 5.3E-06 41.7 1.2 30 116-145 7-36 (232)
477 1nvt_A Shikimate 5'-dehydrogen 87.8 0.46 1.6E-05 40.1 4.1 30 115-145 128-157 (287)
478 3fbt_A Chorismate mutase and s 87.7 0.62 2.1E-05 39.3 4.9 32 114-145 121-153 (282)
479 1gpj_A Glutamyl-tRNA reductase 87.7 0.42 1.4E-05 42.6 4.0 31 115-145 167-198 (404)
480 1np3_A Ketol-acid reductoisome 87.6 0.65 2.2E-05 40.2 5.1 30 116-145 17-46 (338)
481 2pgd_A 6-phosphogluconate dehy 87.6 0.64 2.2E-05 42.5 5.2 29 117-145 4-32 (482)
482 2rcy_A Pyrroline carboxylate r 87.5 0.55 1.9E-05 38.8 4.4 30 116-145 5-38 (262)
483 1y8q_B Anthracycline-, ubiquit 87.5 0.43 1.5E-05 45.0 4.1 30 116-145 18-48 (640)
484 1i36_A Conserved hypothetical 87.5 0.45 1.5E-05 39.4 3.9 29 117-145 2-30 (264)
485 1yb4_A Tartronic semialdehyde 87.4 0.34 1.2E-05 40.8 3.1 29 117-145 5-33 (295)
486 4e4t_A Phosphoribosylaminoimid 87.4 0.55 1.9E-05 42.0 4.6 31 115-145 35-65 (419)
487 1pgj_A 6PGDH, 6-PGDH, 6-phosph 87.4 0.55 1.9E-05 42.8 4.7 29 117-145 3-31 (478)
488 4id9_A Short-chain dehydrogena 87.4 0.72 2.5E-05 39.6 5.3 32 114-145 18-50 (347)
489 4gwg_A 6-phosphogluconate dehy 87.4 0.71 2.4E-05 42.2 5.3 30 116-145 5-34 (484)
490 3pwz_A Shikimate dehydrogenase 87.4 0.69 2.3E-05 38.8 4.9 32 114-145 119-151 (272)
491 2xxj_A L-LDH, L-lactate dehydr 87.4 0.56 1.9E-05 40.2 4.5 29 117-145 2-32 (310)
492 1lu9_A Methylene tetrahydromet 87.3 0.72 2.5E-05 38.8 5.1 31 115-145 119-150 (287)
493 1tt5_A APPBP1, amyloid protein 87.2 0.5 1.7E-05 43.7 4.3 31 115-145 32-63 (531)
494 1wdk_A Fatty oxidation complex 87.2 0.46 1.6E-05 45.7 4.2 30 116-145 315-344 (715)
495 3o8q_A Shikimate 5-dehydrogena 87.2 0.71 2.4E-05 38.9 4.9 32 114-145 125-157 (281)
496 3k5i_A Phosphoribosyl-aminoimi 87.2 0.53 1.8E-05 41.9 4.3 31 115-145 24-54 (403)
497 4gbj_A 6-phosphogluconate dehy 87.2 0.47 1.6E-05 40.3 3.9 31 115-145 5-35 (297)
498 3t4e_A Quinate/shikimate dehyd 87.1 0.75 2.6E-05 39.4 5.0 32 114-145 147-179 (312)
499 3aw8_A PURK, phosphoribosylami 86.9 0.55 1.9E-05 41.0 4.3 29 117-145 1-29 (369)
500 2dbq_A Glyoxylate reductase; D 86.9 0.74 2.5E-05 39.8 5.0 32 114-145 149-180 (334)
No 1
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.94 E-value=2.2e-26 Score=215.36 Aligned_cols=181 Identities=44% Similarity=0.784 Sum_probs=152.4
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhh-cccccCcc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEAT-TSDNFGFH 192 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~g~~ 192 (296)
.+|||+||||||+|+.+|.++++.|.+|+|||+.++...+.++.+||+|.|+||+|++.+.+.....+... ....||+.
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~ 120 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWK 120 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCcc
Confidence 57999999999999999999999999999999555555666778999999999999999999888877665 45668887
Q ss_pred ccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE--c---ceeEEEEeCeEEEcCCCCCCCC
Q psy7665 193 MKK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF--A---GEERTVSAQNFIIAVGGRPTYP 266 (296)
Q Consensus 193 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v--~---g~~~~~~a~~vV~AtG~~p~~p 266 (296)
... .++|..+..+.+...+.+...+...+++.+|+++.+.+.+.+++++.+ . ++.+.+.+|++|+|||++|.+|
T Consensus 121 ~~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs~P~~P 200 (542)
T 4b1b_A 121 FDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGCRPHIP 200 (542)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCEEECCC
T ss_pred cCcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCCCCCCC
Confidence 665 889999999999999988888888899999999999999999998876 2 3457899999999999999998
Q ss_pred CC-CCCccceeec--ccC-CCCCCcEEEeecc
Q psy7665 267 DI-PGARLLRTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 267 ~i-~G~~~~~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
++ ++.++.+++| ++. .+.|++++||+++
T Consensus 201 ~~~~~~~~~~~ts~~~l~l~~lP~~lvIIGgG 232 (542)
T 4b1b_A 201 DDVEGAKELSITSDDIFSLKKDPGKTLVVGAS 232 (542)
T ss_dssp SSSBTHHHHCBCHHHHTTCSSCCCSEEEECCS
T ss_pred CcccCCCccccCchhhhccccCCceEEEECCC
Confidence 64 4555667777 344 5667889998764
No 2
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.91 E-value=1.4e-23 Score=196.54 Aligned_cols=181 Identities=48% Similarity=0.830 Sum_probs=150.5
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..|||+||||||+|+.+|.+|++.|++|+|||+....+.++.+.+||+|.+.+|+|++.+...............+++..
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 56899999999999999999999999999999433334455668999999999999999998888888777788888876
Q ss_pred cc--cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE---cceeEEEEeCeEEEcCCCCCCCCCC
Q psy7665 194 KK--SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDI 268 (296)
Q Consensus 194 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v---~g~~~~~~a~~vV~AtG~~p~~p~i 268 (296)
.. .++|..+..+.+.+.+.+...+...++..+++++.+.+.+.+.+.+.+ +|+..++.||+||+|||++|+.|++
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~~v~v~~~~g~~~~i~~d~lViATGs~p~~p~i 190 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKEKIYSAERFLIATGERPRYLGI 190 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCCCEEEEEEEEECCCEEECCCCC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEcCCCCEEEEECCEEEEECCCCcCCCCC
Confidence 53 789999999998888888877777888899999999988888888877 3434579999999999999999999
Q ss_pred CCCccceeec--ccC-CCCCCcEEEeecc
Q psy7665 269 PGARLLRTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 269 ~G~~~~~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
||.++++.++ ++. ...|++++||+.+
T Consensus 191 ~G~~~~~~t~~~~~~l~~~~~~vvVIGgG 219 (519)
T 3qfa_A 191 PGDKEYCISSDDLFSLPYCPGKTLVVGAS 219 (519)
T ss_dssp TTHHHHCBCHHHHTTCSSCCCSEEEECCS
T ss_pred CCccCceEcHHHHhhhhhcCCeEEEECCc
Confidence 9987776665 333 3457778888654
No 3
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.91 E-value=1.8e-23 Score=194.44 Aligned_cols=181 Identities=45% Similarity=0.802 Sum_probs=148.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..|||+|||||++|+.+|.+|++.|++|+|||+....+.+++..+||+|.+.+|+|++.+...............+|+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 56899999999999999999999999999999422322333458999999999999999998888888888788888876
Q ss_pred cc--cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE---cceeEEEEeCeEEEcCCCCCCCCC-
Q psy7665 194 KK--SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPD- 267 (296)
Q Consensus 194 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v---~g~~~~~~a~~vV~AtG~~p~~p~- 267 (296)
.. .++|..+..+.+.+.+.+...+...++..+++++.++..+.+.+.+.+ +|+...+.||+||+|||++|..|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~~~v~v~~~~g~~~~~~~d~lViATGs~p~~p~~ 164 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQ 164 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSSSEEEEECTTSCEEEEEEEEEEECCCEEECCCSS
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCceEEEECCEEEEcCCCCCCCCCC
Confidence 53 789999999999888888877777888899999999888888888777 344468999999999999999998
Q ss_pred CCCCccceeec--ccC-CCCCCcEEEeecc
Q psy7665 268 IPGARLLRTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 268 i~G~~~~~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
+||.++..+++ ++. ...|++++|++++
T Consensus 165 i~G~~~~~~~~~~~~~~~~~~~~vvViGgG 194 (488)
T 3dgz_A 165 VKGALEYGITSDDIFWLKESPGKTLVVGAS 194 (488)
T ss_dssp CBTHHHHCBCHHHHTTCSSCCCSEEEECCS
T ss_pred CCCcccccCcHHHHHhhhhcCCeEEEECCC
Confidence 99987666665 333 4456778888654
No 4
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.91 E-value=2.5e-23 Score=193.18 Aligned_cols=181 Identities=48% Similarity=0.826 Sum_probs=148.1
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCC-CCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQ-HGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFH 192 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~-~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~ 192 (296)
..|||+|||||++|+.+|.+|++.|++|+|||+..... .++++.+||+|.+.+|+|++.+...............|++.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 46899999999999999999999999999999322222 45666799999999999999999888888887777888877
Q ss_pred ccc--cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE--cceeEEEEeCeEEEcCCCCCCCCCC
Q psy7665 193 MKK--SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF--AGEERTVSAQNFIIAVGGRPTYPDI 268 (296)
Q Consensus 193 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v--~g~~~~~~a~~vV~AtG~~p~~p~i 268 (296)
... .++|..+..+.+.+.+.+...+...++..+++++.+...+.+.+.+.+ .++...+.+|+||+|||++|..|++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~~v~v~~~~g~~~~~~d~lviATGs~p~~p~i 167 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSHTLLAKLKSGERTITAQTFVIAVGGRPRYPDI 167 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEEECTTCCEEEEEEEEEECCCEEECCCSS
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCCEEEEEeCCCeEEEEcCEEEEeCCCCcCCCCC
Confidence 654 679999999998888888777777888889999999988888888877 2223579999999999999999999
Q ss_pred CCCccceeec--ccC-CCCCCcEEEeecc
Q psy7665 269 PGARLLRTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 269 ~G~~~~~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
||.+++.+++ ++. ...|++++|++.+
T Consensus 168 ~G~~~~~~~~~~~~~~~~~~~~vvViGgG 196 (483)
T 3dgh_A 168 PGAVEYGITSDDLFSLDREPGKTLVVGAG 196 (483)
T ss_dssp TTHHHHCBCHHHHTTCSSCCCEEEEECCS
T ss_pred CCcccccCcHHHHhhhhhcCCcEEEECCC
Confidence 9987666665 333 3456778887653
No 5
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.88 E-value=6.8e-22 Score=188.15 Aligned_cols=206 Identities=41% Similarity=0.760 Sum_probs=153.5
Q ss_pred ccCCccchhhhccCcceeeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccC
Q psy7665 87 FLLPTLECQEVYHDGRFYDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVG 166 (296)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~ 166 (296)
.+.++...........+.+.+... ...+||+||||||+|++||.+|++.|++|+|+|+..+...|..|.+||+|.+.+
T Consensus 81 ~igG~~~l~~~~~~g~L~~~l~~~--~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g 158 (598)
T 2x8g_A 81 FIGDSQTVLKYYSNDELAGIVNES--KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVG 158 (598)
T ss_dssp EEECHHHHHHHHHTTCHHHHHHCC--SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHS
T ss_pred EEEeeehhhhhhhcCcchhhcccc--cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccC
Confidence 344444333333333444444322 356899999999999999999999999999999322333455667999999999
Q ss_pred CCchhHHHHhhhhHHHhhcccccCccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE
Q psy7665 167 CIPKKLFHRASLLNEEATTSDNFGFHMKK---SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF 243 (296)
Q Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v 243 (296)
|+|++.+...............+|+.... ..+|..+.++++.+.+.+...+...++..+|+++.+...+.+.+.+.+
T Consensus 159 ~iP~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~~~v~v 238 (598)
T 2x8g_A 159 CIPKKLMHQAGLLSHALEDAEHFGWSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISPHEVQI 238 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETTEEEE
T ss_pred CCchHHHHHHHHHHHHHhhHHhCCccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCCCEEEE
Confidence 99999988877766666666667765432 578899999998888887776667778889999988887778888877
Q ss_pred ---cceeEEEEeCeEEEcCCCCCCCCCCCCCccceeec--ccC-CCCCCcEEEeecc
Q psy7665 244 ---AGEERTVSAQNFIIAVGGRPTYPDIPGARLLRTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 244 ---~g~~~~~~a~~vV~AtG~~p~~p~i~G~~~~~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
+|+...+.||+||+|||++|+.|++||.+++..++ ++. ...+++++||+++
T Consensus 239 ~~~~g~~~~~~~d~lviAtGs~p~~p~i~G~~~~~~~~~~~~~~~~~~~~vvViGgG 295 (598)
T 2x8g_A 239 TDKNQKVSTITGNKIILATGERPKYPEIPGAVEYGITSDDLFSLPYFPGKTLVIGAS 295 (598)
T ss_dssp ECTTCCEEEEEEEEEEECCCEEECCCSSTTHHHHCEEHHHHTTCSSCCCSEEEECCS
T ss_pred EeCCCCeEEEEeCEEEEeCCCCCCCCCCCCcccceEcHHHHhhCccCCCEEEEECCC
Confidence 34335789999999999999999999987666665 232 2456778888754
No 6
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.87 E-value=2.5e-21 Score=180.17 Aligned_cols=180 Identities=30% Similarity=0.520 Sum_probs=141.3
Q ss_pred ccccEEEECCChHHHHHHHHHHh-CCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAAS-MNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFH 192 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~-~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~ 192 (296)
..+||+|||||++|+++|.+|++ .|++|+|||+..++...++..+||+|.+.+|+|++.+.+.............+++.
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~ 85 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWE 85 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCcc
Confidence 35899999999999999999999 99999999922222223333789999999999999999888777766666677775
Q ss_pred ccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CcEEEcceEEEEeCCEEEEc--ce-----eEEEEeCeEEEcCCC
Q psy7665 193 MKK---SFTWKTLVDNVQKYIRNLNNNYEKELEKN-KIDYFNAKAVFVDKHRVKFA--GE-----ERTVSAQNFIIAVGG 261 (296)
Q Consensus 193 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~v~v~--g~-----~~~~~a~~vV~AtG~ 261 (296)
... .++|..+..+.+.+.+.+...+...+++. +++++.+++.+.+.+.|.++ +. ...+.||+||+|||+
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~~~~~~~~~~d~lViATGs 165 (495)
T 2wpf_A 86 FDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESKNVVVVRETADPKSAVKERLQADHILLATGS 165 (495)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeCCEEEEeecCCccCCCCeEEEcCEEEEeCCC
Confidence 432 46888999988888888877777888888 99999988877788888884 11 367999999999999
Q ss_pred CCCCCCCCCCccceeec--ccC-CCCCCcEEEeecc
Q psy7665 262 RPTYPDIPGARLLRTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 262 ~p~~p~i~G~~~~~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
+|+.|++||.+ .+.++ ++. ...+++++|++.+
T Consensus 166 ~p~~p~i~G~~-~~~~~~~~~~~~~~~~~vvViGgG 200 (495)
T 2wpf_A 166 WPQMPAIPGIE-HCISSNEAFYLPEPPRRVLTVGGG 200 (495)
T ss_dssp EECCCCCTTGG-GCEEHHHHTTCSSCCSEEEEECSS
T ss_pred CcCCCCCCCcc-ccccHHHHHhhhhcCCeEEEECCC
Confidence 99999999984 34554 333 3356778887653
No 7
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.87 E-value=3.5e-21 Score=177.78 Aligned_cols=168 Identities=38% Similarity=0.715 Sum_probs=137.0
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMK 194 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (296)
.+||+|||||++|+.+|.+|++.|++|+||| +. .+||+|.+.+|+|++.++..............+++...
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE--~~-------~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~ 74 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIE--SK-------ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQAS 74 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEE--SS-------CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEc--CC-------CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccC
Confidence 5799999999999999999999999999999 32 67999999999999999888777776666677777654
Q ss_pred c-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEEcceeEEEEeCeEEEcCCCCCCCCCCCCCcc
Q psy7665 195 K-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPDIPGARL 273 (296)
Q Consensus 195 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v~g~~~~~~a~~vV~AtG~~p~~p~i~G~~~ 273 (296)
. ..+|..+..+.+.+.+.+...+...+.+.+++++.++....+.+.|.+++ .++.+|+||+|||++|..|++||.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~g--~~~~~d~lviAtGs~p~~p~i~G~~- 151 (463)
T 2r9z_A 75 GGTLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEVEG--QRLSADHIVIATGGRPIVPRLPGAE- 151 (463)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETT--EEEEEEEEEECCCEEECCCSCTTGG-
T ss_pred CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEECC--EEEEcCEEEECCCCCCCCCCCCCcc-
Confidence 4 67899898888888888877777788888999998887777778888766 5799999999999999999999984
Q ss_pred ceeec--ccC-CCCCCcEEEeecc
Q psy7665 274 LRTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 274 ~~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
.+.++ ++. ...+++++|++.+
T Consensus 152 ~~~~~~~~~~~~~~~~~vvVvGgG 175 (463)
T 2r9z_A 152 LGITSDGFFALQQQPKRVAIIGAG 175 (463)
T ss_dssp GSBCHHHHHHCSSCCSEEEEECCS
T ss_pred ceecHHHHhhhhccCCEEEEECCC
Confidence 34444 222 3456778887653
No 8
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.86 E-value=4.8e-21 Score=177.46 Aligned_cols=179 Identities=26% Similarity=0.377 Sum_probs=141.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhc-ccccCcc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATT-SDNFGFH 192 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~g~~ 192 (296)
..|||+|||||++|+++|.+|++.|++|+||| +.+..|....+||+|.+.+|+|++.+............ +..+++.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liE--k~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~ 79 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIE--KYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGIS 79 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEE--CCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEe--CCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 35899999999999999999999999999999 66566777779999999999999988887766665543 5777776
Q ss_pred ccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE---cceeEEEEeCeEEEcCCCCCCCCCC
Q psy7665 193 MKK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDI 268 (296)
Q Consensus 193 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v---~g~~~~~~a~~vV~AtG~~p~~p~i 268 (296)
... .++|..+..+.+.+.+.+...+...++..+++++.++..+.+.+.+.+ +++...+.+|+||+|||++|..|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~p~~~~~ 159 (476)
T 3lad_A 80 TGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAGKKVEVTAADGSSQVLDTENVILASGSKPVEIPP 159 (476)
T ss_dssp CSCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECSTTCEEEECTTSCEEEECCSCEEECCCEEECCCTT
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEcCCCceEEEEcCEEEEcCCCCCCCCCC
Confidence 654 788999988888888888777777788889999998887777777766 3444678999999999999987765
Q ss_pred CCCc-cceeec--cc-CCCCCCcEEEeecc
Q psy7665 269 PGAR-LLRTLS--LL-SGVDPPTLIFLEHI 294 (296)
Q Consensus 269 ~G~~-~~~~~s--~~-~~~~~~~~~~~~~~ 294 (296)
++.+ ..++++ .+ ....+++++|++.+
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~v~ViGgG 189 (476)
T 3lad_A 160 APVDQDVIVDSTGALDFQNVPGKLGVIGAG 189 (476)
T ss_dssp SCCCSSSEEEHHHHTSCSSCCSEEEEECCS
T ss_pred CCCCcccEEechhhhccccCCCeEEEECCC
Confidence 5543 556665 22 23456778887653
No 9
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.86 E-value=3e-21 Score=179.55 Aligned_cols=170 Identities=26% Similarity=0.428 Sum_probs=138.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..|||+||||||+|+++|.+|++.|++|+||| +. .+||+|.+++|+|++.+............+..+|++.
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE--~~-------~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 77 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIE--GG-------AYGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQV 77 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEE--SS-------CSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEe--CC-------CCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCC
Confidence 35899999999999999999999999999999 32 6899999999999999999998888888888888875
Q ss_pred cc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CcEEEcceEEEEeCCEEEE-cceeEEEEeCeEEEcCCCCCCCCCCCC
Q psy7665 194 KK-SFTWKTLVDNVQKYIRNLNNNYEKELEKN-KIDYFNAKAVFVDKHRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPG 270 (296)
Q Consensus 194 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~v~v-~g~~~~~~a~~vV~AtG~~p~~p~i~G 270 (296)
.. .+++..+..++....+.+...+...+... +++++.++..+.+.+.+.+ ++ ..+.+|+||+|||++|..|+++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~~~~v~~~~~--~~~~~d~lViATGs~p~~p~~~~ 155 (492)
T 3ic9_A 78 DRISVNGKAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLDEHTLQVDDH--SQVIAKRIVIATGSRPNYPEFLA 155 (492)
T ss_dssp SEEEECHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEETTEEEETTT--EEEEEEEEEECCCEECCCCHHHH
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEecCCEEEEcCC--cEEEeCEEEEccCCCCcCCCCCC
Confidence 44 67898888888888777766666555554 6678888888888899998 66 68999999999999999998765
Q ss_pred C-ccceeec--ccC-CCCCCcEEEeecc
Q psy7665 271 A-RLLRTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 271 ~-~~~~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
. ...++++ .+. ...+++++|++++
T Consensus 156 ~~~~~v~t~~~~~~~~~~~k~vvViGgG 183 (492)
T 3ic9_A 156 AAGSRLLTNDNLFELNDLPKSVAVFGPG 183 (492)
T ss_dssp TTGGGEECHHHHTTCSSCCSEEEEESSC
T ss_pred ccCCcEEcHHHHhhhhhcCCeEEEECCC
Confidence 3 3556665 233 3456778888654
No 10
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.86 E-value=3.8e-21 Score=176.91 Aligned_cols=168 Identities=38% Similarity=0.709 Sum_probs=136.5
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhh-cccccCccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEAT-TSDNFGFHM 193 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~g~~~ 193 (296)
.+||+|||||++|+++|.+|++.|++|+||| +. .+||+|.+.+|+|++.++.......... ....+++..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE--~~-------~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~ 74 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIE--AK-------ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDT 74 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEE--SS-------CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEc--CC-------CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccC
Confidence 5799999999999999999999999999999 33 6799999999999999988877766665 556677654
Q ss_pred cc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEEcceeEEEEeCeEEEcCCCCCCCCCCCCCc
Q psy7665 194 KK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPDIPGAR 272 (296)
Q Consensus 194 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v~g~~~~~~a~~vV~AtG~~p~~p~i~G~~ 272 (296)
.. .++|..+..+.+.+.+.+...+...+...+++++.++....+.+.+.+++ ..+.+|+||+|||++|..|++||.+
T Consensus 75 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~~~g--~~~~~d~lviAtGs~p~~p~i~g~~ 152 (450)
T 1ges_A 75 TINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDAKTLEVNG--ETITADHILIATGGRPSHPDIPGVE 152 (450)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEETTEEEETT--EEEEEEEEEECCCEEECCCCSTTGG
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEECC--EEEEeCEEEECCCCCCCCCCCCCcc
Confidence 43 67888888888888888877777788888999998877667777887766 6799999999999999999999984
Q ss_pred cceeec--ccC-CCCCCcEEEeecc
Q psy7665 273 LLRTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 273 ~~~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
.+.++ ++. ...+++++|++++
T Consensus 153 -~~~~~~~~~~~~~~~~~vvViGgG 176 (450)
T 1ges_A 153 -YGIDSDGFFALPALPERVAVVGAG 176 (450)
T ss_dssp -GSBCHHHHHHCSSCCSEEEEECCS
T ss_pred -ceecHHHhhhhhhcCCeEEEECCC
Confidence 34444 222 3456778888654
No 11
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.86 E-value=5.4e-21 Score=177.22 Aligned_cols=169 Identities=33% Similarity=0.667 Sum_probs=140.4
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+.+|.+|++.|++|+||| +. .+||+|.+.+|+|++.++..............+++..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE--~~-------~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~ 89 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVE--SH-------KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPS 89 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEE--SS-------CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEe--cC-------CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccC
Confidence 46899999999999999999999999999999 32 7899999999999999999888888888888888876
Q ss_pred cc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCC--EEEEcceeEEEEeCeEEEcCCCCCCCC---C
Q psy7665 194 KK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKH--RVKFAGEERTVSAQNFIIAVGGRPTYP---D 267 (296)
Q Consensus 194 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~v~v~g~~~~~~a~~vV~AtG~~p~~p---~ 267 (296)
.. .++|..+..+.+.+.+.+...+...++..+++++.++..+.+.. .+..++ .++.||+||+|||++|..| +
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~g--~~~~~d~lviAtG~~p~~p~~~~ 167 (478)
T 3dk9_A 90 CEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEVSG--KKYTAPHILIATGGMPSTPHESQ 167 (478)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEEETT--EEEECSCEEECCCEEECCCCTTT
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEEECC--EEEEeeEEEEccCCCCCCCCcCC
Confidence 55 78999999999998888888888888889999998887765543 455466 6799999999999999999 9
Q ss_pred CCCCccceeec--ccC-CCCCCcEEEeecc
Q psy7665 268 IPGARLLRTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 268 i~G~~~~~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
+||.+ ...++ ++. ...+++++||+++
T Consensus 168 i~G~~-~~~~~~~~~~~~~~~~~vvViGgG 196 (478)
T 3dk9_A 168 IPGAS-LGITSDGFFQLEELPGRSVIVGAG 196 (478)
T ss_dssp STTGG-GSBCHHHHTTCCSCCSEEEEECCS
T ss_pred CCCCc-eeEchHHhhchhhcCccEEEECCC
Confidence 99986 34444 333 3456778887654
No 12
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.86 E-value=9.8e-21 Score=175.98 Aligned_cols=179 Identities=30% Similarity=0.509 Sum_probs=140.2
Q ss_pred cccEEEECCChHHHHHHHHHHh-CCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAAS-MNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~-~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
.|||+|||||++|+++|.+|++ .|++|+|||+......+++..+||+|.+.+|+|++.+.+.....+.......|++..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 5799999999999999999999 999999999211111222337899999999999999998888777777777777754
Q ss_pred cc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CcEEEcceEEEEeCCEEEEc-----ce--eEEEEeCeEEEcCCCC
Q psy7665 194 KK---SFTWKTLVDNVQKYIRNLNNNYEKELEKN-KIDYFNAKAVFVDKHRVKFA-----GE--ERTVSAQNFIIAVGGR 262 (296)
Q Consensus 194 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~v~v~-----g~--~~~~~a~~vV~AtG~~ 262 (296)
.. .++|..+..+.+...+.+...+...+++. +++++.+++...+.+.+.+. ++ ...+.+|+||+|||++
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~~~v~v~~~~~~~g~~~~~~~~d~lviAtGs~ 162 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSW 162 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEETTEEEEESSSSTTSCEEEEEEEEEEEECCCEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeCCEEEEEeeccCCCCceEEEEcCEEEEeCCCC
Confidence 32 46888888888888888877777888888 99999988877777888873 33 2679999999999999
Q ss_pred CCCCCCCCCccceeec--ccC-CCCCCcEEEeecc
Q psy7665 263 PTYPDIPGARLLRTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 263 p~~p~i~G~~~~~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
|..|++||.+ .+.++ ++. ...+++++|++++
T Consensus 163 p~~p~i~g~~-~~~~~~~~~~~~~~~~~vvViGgG 196 (490)
T 1fec_A 163 PQHLGIEGDD-LCITSNEAFYLDEAPKRALCVGGG 196 (490)
T ss_dssp ECCCCSBTGG-GCBCHHHHTTCSSCCSEEEEECSS
T ss_pred CCCCCCCCcc-ceecHHHHhhhhhcCCeEEEECCC
Confidence 9999999984 34444 233 3356778887653
No 13
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.86 E-value=5.3e-21 Score=176.61 Aligned_cols=169 Identities=36% Similarity=0.651 Sum_probs=141.4
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..|||+|||||++|+++|++|+++|++|+||| + + .+||+|.+.+|+|++.+...............+++..
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liE--k-~------~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~ 74 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAE--E-F------RYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTV 74 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEE--S-S------CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEe--C-C------CCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCccc
Confidence 35899999999999999999999999999999 4 4 7999999999999999999888888888888888875
Q ss_pred cc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE--cceeEEEEeCeEEEcCCCCCC-CCCCC
Q psy7665 194 KK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF--AGEERTVSAQNFIIAVGGRPT-YPDIP 269 (296)
Q Consensus 194 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v--~g~~~~~~a~~vV~AtG~~p~-~p~i~ 269 (296)
.. .++|..+..+.......+...+...+++.+++++.++..+.+.+.+.+ ++ ..+.+|++|+|||++|. .|++|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~--~~~~~d~lviAtG~~p~~~p~i~ 152 (463)
T 4dna_A 75 GESRFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASG--KTVTAERIVIAVGGHPSPHDALP 152 (463)
T ss_dssp CCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTT--EEEEEEEEEECCCEEECCCTTST
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCC--eEEEeCEEEEecCCCcccCCCCC
Confidence 54 788999998888888888777778888889999998887777888888 45 68999999999999999 99999
Q ss_pred CCccceeec--ccC-CCCCCcEEEeecc
Q psy7665 270 GARLLRTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 270 G~~~~~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
|.+. +.++ ++. ...++++++++.+
T Consensus 153 G~~~-~~~~~~~~~~~~~~~~v~ViGgG 179 (463)
T 4dna_A 153 GHEL-CITSNEAFDLPALPESILIAGGG 179 (463)
T ss_dssp TGGG-CBCHHHHTTCSSCCSEEEEECCS
T ss_pred Cccc-cccHHHHhhhhcCCCeEEEECCC
Confidence 9853 4444 333 3446677777643
No 14
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.85 E-value=1e-20 Score=175.68 Aligned_cols=167 Identities=35% Similarity=0.662 Sum_probs=139.5
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMK 194 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (296)
.|||+|||||++|+++|++|+++|++|+||| + + .+||+|.+.+|+|++.+...............+++...
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liE--k-~------~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~ 96 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAE--E-Y------RIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYA 96 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEE--S-S------CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEe--C-C------CCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccC
Confidence 5899999999999999999999999999999 4 4 78999999999999999998888888888888888765
Q ss_pred c-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE--cceeEEEEeCeEEEcCCCCCC-CCCCCC
Q psy7665 195 K-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF--AGEERTVSAQNFIIAVGGRPT-YPDIPG 270 (296)
Q Consensus 195 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v--~g~~~~~~a~~vV~AtG~~p~-~p~i~G 270 (296)
. .+++..+..+.......+...+...++..+++++.+...+.+.+.+.+ ++ ..+.+|++|+|||++|. .|++||
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~--~~~~~d~lviAtG~~p~~~p~i~G 174 (484)
T 3o0h_A 97 DPIFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTG--ERISAEKILIATGAKIVSNSAIKG 174 (484)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTC--CEEEEEEEEECCCEEECCC--CBT
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCC--eEEEeCEEEEccCCCcccCCCCCC
Confidence 5 788999988888888888888888888899999998888888888888 44 67999999999999999 899999
Q ss_pred Cccceeec--ccC-CCCCCcEEEeec
Q psy7665 271 ARLLRTLS--LLS-GVDPPTLIFLEH 293 (296)
Q Consensus 271 ~~~~~~~s--~~~-~~~~~~~~~~~~ 293 (296)
.+ .+.++ ++. ...++++++++.
T Consensus 175 ~~-~~~~~~~~~~~~~~~~~v~ViGg 199 (484)
T 3o0h_A 175 SD-LCLTSNEIFDLEKLPKSIVIVGG 199 (484)
T ss_dssp GG-GSBCTTTGGGCSSCCSEEEEECC
T ss_pred cc-ccccHHHHHhHHhcCCcEEEECc
Confidence 85 34444 232 345677777764
No 15
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.85 E-value=6.7e-21 Score=177.53 Aligned_cols=170 Identities=39% Similarity=0.682 Sum_probs=126.7
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMK 194 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (296)
.+||+|||||++|+++|.+|++.|++|+||| +. .+||+|.+.+|+|++.+...............+++...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE--~~-------~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~ 72 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVE--KS-------RLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK 72 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEE--SS-------STTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEe--CC-------CcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC
Confidence 4799999999999999999999999999999 33 57999999999999988887777777766777777654
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE-c-----------ceeEEEEeCeEEEcCCCC
Q psy7665 195 KSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF-A-----------GEERTVSAQNFIIAVGGR 262 (296)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v-~-----------g~~~~~~a~~vV~AtG~~ 262 (296)
..++|+.+..+.+.+.+.+...+...+++.+++++.++....+.+.+.+ + +...++.||+||+|||++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~ 152 (500)
T 1onf_A 73 FSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNK 152 (500)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC--------------------------CBSSEEECCCCC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeccccccccccCCCceEEEeCEEEECCCCC
Confidence 4678888888877777777777777778889999887654444455655 3 112568999999999999
Q ss_pred CCCCCCCCCccceeec--ccCCCCCCcEEEeecc
Q psy7665 263 PTYPDIPGARLLRTLS--LLSGVDPPTLIFLEHI 294 (296)
Q Consensus 263 p~~p~i~G~~~~~~~s--~~~~~~~~~~~~~~~~ 294 (296)
|..|++||.+ .+.++ ++..+.+++++|++++
T Consensus 153 p~~p~i~G~~-~~~~~~~~~~~~~~~~vvViGgG 185 (500)
T 1onf_A 153 PVFPPVKGIE-NTISSDEFFNIKESKKIGIVGSG 185 (500)
T ss_dssp BCCCSCTTGG-GCEEHHHHTTCCCCSEEEEECCS
T ss_pred CCCCCCCCCC-cccCHHHHhccCCCCeEEEECCh
Confidence 9999999984 34554 3444447788888654
No 16
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.85 E-value=2.2e-20 Score=173.64 Aligned_cols=171 Identities=31% Similarity=0.492 Sum_probs=136.0
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhc-ccccCcc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATT-SDNFGFH 192 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~g~~ 192 (296)
+.+||+|||||++|+++|.+|++.|++|+||| +.+ .+||+|.+.+|+|++.+............ +..+++.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liE--k~~------~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~ 95 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVE--KRS------TYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVE 95 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEE--SSS------SSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEe--cCC------CCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcc
Confidence 46899999999999999999999999999999 666 89999999999999998887776665554 5777776
Q ss_pred ccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE---cceeEEEEeCeEEEcCCCCCCCCCC
Q psy7665 193 MKK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDI 268 (296)
Q Consensus 193 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v---~g~~~~~~a~~vV~AtG~~p~~p~i 268 (296)
... .++|..+..+.+...+.+...+...++..+++++.+...+.+.+.+.+ +|+...+.+|+||+|||++| |.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lViATGs~p--~~i 173 (491)
T 3urh_A 96 VANPKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLGQGKVSVTNEKGEEQVLEAKNVVIATGSDV--AGI 173 (491)
T ss_dssp CCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECSSSEEEEECTTSCEEEEECSEEEECCCEEC--CCB
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEeCCCceEEEEeCEEEEccCCCC--CCC
Confidence 654 778999988888888888777788888899999999888877777777 34446899999999999876 456
Q ss_pred CCCc-----cceeec---ccCCCCCCcEEEeecc
Q psy7665 269 PGAR-----LLRTLS---LLSGVDPPTLIFLEHI 294 (296)
Q Consensus 269 ~G~~-----~~~~~s---~~~~~~~~~~~~~~~~ 294 (296)
||.+ ..+.++ ......+++++|++++
T Consensus 174 pg~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG 207 (491)
T 3urh_A 174 PGVEVAFDEKTIVSSTGALALEKVPASMIVVGGG 207 (491)
T ss_dssp TTBCCCCCSSSEECHHHHTSCSSCCSEEEEECCS
T ss_pred CCcccccCCeeEEehhHhhhhhhcCCeEEEECCC
Confidence 7654 234444 2234457778888654
No 17
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.85 E-value=2.1e-20 Score=173.11 Aligned_cols=173 Identities=26% Similarity=0.348 Sum_probs=135.7
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhh--cccccCc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEAT--TSDNFGF 191 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~--~~~~~g~ 191 (296)
..+||+|||||++|+.+|.+|++.|++|+||| +.+ .+||+|.+.+|+|++.+........... .+..+|+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE--~~~------~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~ 76 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIE--KNE------TLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGI 76 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEE--CSS------SSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEe--CCC------CcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCcc
Confidence 46899999999999999999999999999999 666 7899999999999998887766655554 5555666
Q ss_pred cccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE--cc-eeEEEEeCeEEEcCCCCCCCCC
Q psy7665 192 HMKK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF--AG-EERTVSAQNFIIAVGGRPTYPD 267 (296)
Q Consensus 192 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v--~g-~~~~~~a~~vV~AtG~~p~~p~ 267 (296)
+... ..++..+..+.+.+.+.+...+...+++.+++++.++....+.+.+.+ .+ +..++.||+||+|||++|..|+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p~ 156 (474)
T 1zmd_A 77 EMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFP 156 (474)
T ss_dssp EESCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEETTEEEEECTTSCEEEEEEEEEEECCCEEECCCT
T ss_pred ccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecCCEEEEEecCCCcEEEEeCEEEECCCCCCCCCC
Confidence 5433 568888888887777777777777788889999988877667777766 22 3357999999999999999999
Q ss_pred CCCCcc-ceeec--ccCC-CCCCcEEEeecc
Q psy7665 268 IPGARL-LRTLS--LLSG-VDPPTLIFLEHI 294 (296)
Q Consensus 268 i~G~~~-~~~~s--~~~~-~~~~~~~~~~~~ 294 (296)
+||.+. .+.++ .+.. ..+++++|++++
T Consensus 157 i~g~~~~~v~t~~~~~~~~~~~~~vvViGgG 187 (474)
T 1zmd_A 157 GITIDEDTIVSSTGALSLKKVPEKMVVIGAG 187 (474)
T ss_dssp TCCCCSSSEECHHHHTTCSSCCSEEEEECCS
T ss_pred CCCCCcCcEEcHHHHhhccccCceEEEECCC
Confidence 999764 35555 2332 346778887654
No 18
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.85 E-value=3e-20 Score=171.30 Aligned_cols=169 Identities=23% Similarity=0.362 Sum_probs=135.1
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccc---cC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDN---FG 190 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~---~g 190 (296)
..+||+|||||++|+++|.+|++.|++|+|+| + + .+||+|.+.+|+|++.+............... +|
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie--~-~------~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g 74 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVE--G-Q------ALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLG 74 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEEC--S-S------CTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEc--c-C------CCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccC
Confidence 46899999999999999999999999999999 5 4 78999999999999988877766666555555 67
Q ss_pred ccccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEEcceeEEEEeCeEEEcCCCCCCCCC-C
Q psy7665 191 FHMKK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPD-I 268 (296)
Q Consensus 191 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v~g~~~~~~a~~vV~AtG~~p~~p~-i 268 (296)
++... .+++..+..+.+...+.+...+...+++.+++++.++..+.+.+.+.+++ ..+.||+||+|||++|+.|+ +
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~--~~~~~d~lviATGs~p~~~~~~ 152 (458)
T 1lvl_A 75 ISVASPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGKQVEVDG--QRIQCEHLLLATGSSSVELPML 152 (458)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEETTEEEETT--EEEECSEEEECCCEEECCBTTB
T ss_pred cccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEccCCEEEEee--EEEEeCEEEEeCCCCCCCCCCC
Confidence 76544 77899998888888777777777778889999999887777778888866 67999999999999998776 6
Q ss_pred CCCccceeec--ccCC-CCCCcEEEeecc
Q psy7665 269 PGARLLRTLS--LLSG-VDPPTLIFLEHI 294 (296)
Q Consensus 269 ~G~~~~~~~s--~~~~-~~~~~~~~~~~~ 294 (296)
|. +..+.++ .+.. ..+++++|++++
T Consensus 153 ~~-~~~v~~~~~~~~~~~~~~~vvViGgG 180 (458)
T 1lvl_A 153 PL-GGPVISSTEALAPKALPQHLVVVGGG 180 (458)
T ss_dssp CC-BTTEECHHHHTCCSSCCSEEEEECCS
T ss_pred Cc-cCcEecHHHHhhhhccCCeEEEECcC
Confidence 63 3345554 2332 346778888654
No 19
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.2e-20 Score=173.16 Aligned_cols=171 Identities=36% Similarity=0.644 Sum_probs=136.2
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+++|.+|++.|++|+||| +. .+||+|.+.+|+|++.+...............+++..
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE--~~-------~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~ 80 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVE--AK-------ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQ 80 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEE--SS-------CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBST
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEe--CC-------CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccc
Confidence 45899999999999999999999999999999 32 6899999999999999888777777666666777764
Q ss_pred -------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE---cceeEEEEeCeEEEcCCCCC
Q psy7665 194 -------KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRP 263 (296)
Q Consensus 194 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v---~g~~~~~~a~~vV~AtG~~p 263 (296)
...++|..+..+.+.+.+.+...+...++..+++++.++....+.+.+.+ +++...+.+|+||+|||++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~v~~~~g~~~~~~~d~lviAtGs~p 160 (479)
T 2hqm_A 81 NLPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDGNVEVQKRDNTTEVYSANHILVATGGKA 160 (479)
T ss_dssp TSCCSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTSCEEEEESSSCCEEEEEEEEEECCCEEE
T ss_pred ccccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 23678888888888888888777777888889999888776666666665 44334789999999999999
Q ss_pred CCC-CCCCCccceeec--ccC-CCCCCcEEEeecc
Q psy7665 264 TYP-DIPGARLLRTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 264 ~~p-~i~G~~~~~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
..| ++||.+ .+.++ ++. ...+++++|++++
T Consensus 161 ~~p~~i~g~~-~~~~~~~~~~l~~~~~~vvViGgG 194 (479)
T 2hqm_A 161 IFPENIPGFE-LGTDSDGFFRLEEQPKKVVVVGAG 194 (479)
T ss_dssp CCCTTSTTGG-GSBCHHHHHHCSSCCSEEEEECSS
T ss_pred CCCCCCCCcc-cccchHHHhcccccCCeEEEECCC
Confidence 999 899984 34443 233 3456778887654
No 20
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.84 E-value=2.5e-20 Score=172.26 Aligned_cols=166 Identities=23% Similarity=0.367 Sum_probs=130.3
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMK 194 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (296)
.|||+|||||++|+.+|.+|++.|++|+||| +.+ .+||+|.+.+|+|++.+................ .
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liE--k~~------~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~----~ 71 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMAD--PKG------ELGGNCLYSGCVPSKTVREVIQTAWRLTNIANV----K 71 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--TTS------SSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCS----C
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEE--CCC------CCCCcccccCCCchHHHHHHHHHHHHHHhcccC----C
Confidence 5899999999999999999999999999999 666 899999999999999988877766665554431 1
Q ss_pred ccCCHHHHHHHHHHHHHHHH--HHHHHHHHHCCcEEEcceEEEEeCCEEEE---cceeEEEEeCeEEEcCCCCCCCCCCC
Q psy7665 195 KSFTWKTLVDNVQKYIRNLN--NNYEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDIP 269 (296)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~v~v---~g~~~~~~a~~vV~AtG~~p~~p~i~ 269 (296)
..+++..+..+.+...+ +. ..+...+++.+++++.+++...+...+.+ +++..++.+|+||+|||++|+.|++|
T Consensus 72 ~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~p~i~ 150 (466)
T 3l8k_A 72 IPLDFSTVQDRKDYVQE-LRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETAKLRLP 150 (466)
T ss_dssp CCCCHHHHHHHHHHHHH-HHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCCCCT
T ss_pred CCcCHHHHHHHHHhhee-ccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCccCCCCC
Confidence 26688888888777776 66 66667777789999998877777777666 44233499999999999999999999
Q ss_pred CCccceeec--cc----C-CCCCCcEEEeecc
Q psy7665 270 GARLLRTLS--LL----S-GVDPPTLIFLEHI 294 (296)
Q Consensus 270 G~~~~~~~s--~~----~-~~~~~~~~~~~~~ 294 (296)
|.+ .+.++ ++ . ...++++++++++
T Consensus 151 G~~-~~~t~~~~~~~~~~l~~~~~~vvViGgG 181 (466)
T 3l8k_A 151 GVE-YCLTSDDIFGYKTSFRKLPQDMVIIGAG 181 (466)
T ss_dssp TGG-GSBCHHHHHSTTCSCCSCCSEEEEECCS
T ss_pred Ccc-ceEeHHHHHHHHHHHhhCCCeEEEECCC
Confidence 987 44444 23 2 3346778887654
No 21
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.84 E-value=3.6e-20 Score=171.28 Aligned_cols=172 Identities=28% Similarity=0.488 Sum_probs=132.9
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhc-ccccCccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATT-SDNFGFHM 193 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~g~~~ 193 (296)
.+||+|||||++|+++|.+|++.|++|+||| +.+ .+||+|.+.+|+|++.+.......+.... ...+|++.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie--~~~------~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~ 73 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVE--KRG------ALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMG 73 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEE--SSS------SSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEe--CCC------CcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 4799999999999999999999999999999 666 78999999999999988776665555543 45566653
Q ss_pred -cc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE---cceeEEEEeCeEEEcCCCCCCCCCC
Q psy7665 194 -KK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDI 268 (296)
Q Consensus 194 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v---~g~~~~~~a~~vV~AtG~~p~~p~i 268 (296)
.. .+++..+..+.+...+.+...+...+++.+++++.++....+.+.+++ +|+...+.+|+||+|||++|..|++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~p~~ 153 (468)
T 2qae_A 74 GEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETAHSIRVNGLDGKQEMLETKKTIIATGSEPTELPF 153 (468)
T ss_dssp GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEECCBTT
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEEecCCceEEEEcCEEEECCCCCcCCCCC
Confidence 22 567888887777777777666677777789999988877777777766 3433679999999999999999999
Q ss_pred CCCcc-ceeec--ccC-CCCCCcEEEeecc
Q psy7665 269 PGARL-LRTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 269 ~G~~~-~~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
+|.+. .+.++ .+. ...+++++|++.+
T Consensus 154 ~g~~~~~v~t~~~~~~~~~~~~~vvViGgG 183 (468)
T 2qae_A 154 LPFDEKVVLSSTGALALPRVPKTMVVIGGG 183 (468)
T ss_dssp BCCCSSSEECHHHHHTCSSCCSEEEEECCS
T ss_pred CCCCcCceechHHHhhcccCCceEEEECCC
Confidence 98763 45554 222 2356778887654
No 22
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.84 E-value=7.9e-20 Score=168.37 Aligned_cols=172 Identities=29% Similarity=0.425 Sum_probs=134.5
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+.+|.+|++.|++|+|+| +. .+||+|.+.+|+|++.+...........+...+++..
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie--~~-------~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~ 72 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVE--KG-------NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKA 72 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEE--SS-------CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEEC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEE--CC-------CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCccc
Confidence 35799999999999999999999999999999 32 6799999999999998887777777777777777765
Q ss_pred cc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE--cceeEEEEeCeEEEcCCCCCCCCCCCC
Q psy7665 194 KK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF--AGEERTVSAQNFIIAVGGRPTYPDIPG 270 (296)
Q Consensus 194 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v--~g~~~~~~a~~vV~AtG~~p~~p~i~G 270 (296)
.. ..++..+..+.+...+.+...+...+++.+++++.++....+.+.+.+ .++..++.||+||+|||++|..|+++|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~i~~d~lViATGs~p~~~~~~g 152 (455)
T 1ebd_A 73 ENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIELPNFK 152 (455)
T ss_dssp CSCEECHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEETTEEEEEETTEEEEEECSEEEECCCEEECCBTTBC
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEeCCCcEEEEeCEEEEecCCCCCCCCCCC
Confidence 43 567887777776666666666777788889999988876666676666 222257899999999999999999998
Q ss_pred Cccceeec--ccCC-CCCCcEEEeecc
Q psy7665 271 ARLLRTLS--LLSG-VDPPTLIFLEHI 294 (296)
Q Consensus 271 ~~~~~~~s--~~~~-~~~~~~~~~~~~ 294 (296)
.+..+.++ .+.. ..+++++|++++
T Consensus 153 ~~~~v~~~~~~~~~~~~~~~vvViGgG 179 (455)
T 1ebd_A 153 FSNRILDSTGALNLGEVPKSLVVIGGG 179 (455)
T ss_dssp CCSSEECHHHHHTCSSCCSEEEEECCS
T ss_pred ccceEecHHHHhccccCCCeEEEECCC
Confidence 76545554 2332 356778888754
No 23
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.83 E-value=3.8e-20 Score=170.52 Aligned_cols=168 Identities=31% Similarity=0.438 Sum_probs=132.9
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKK 195 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~ 195 (296)
|||+|||||++|+++|.+|++.|++|+|+| +.+ .+||+|.+.+|+|++.+.......+.... ..++++...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie--~~~------~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~g~~~~~ 72 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVE--KEK------ALGGTCLRVGCIPSKALLETTERIYEAKK-GLLGAKVKG 72 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEE--SSS------SSSHHHHHHSHHHHHHHHHHHHHHHHHHH-CCTTEEECC
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEe--CCC------CCCCccceecchhHHHHHHHHHHHHHHhh-hcCCcccCC
Confidence 799999999999999999999999999999 666 78999999999999988877766665554 566765443
Q ss_pred -cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEEc--ceeEEEEeCeEEEcCCCCCCCCCCCCCc
Q psy7665 196 -SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKFA--GEERTVSAQNFIIAVGGRPTYPDIPGAR 272 (296)
Q Consensus 196 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v~--g~~~~~~a~~vV~AtG~~p~~p~i~G~~ 272 (296)
..++..+..+.+.+.+.+...+...+++.+++++.++..+.+.+.+.+. + ..+.||+||+|||++|..|+++|.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~~~~~v~~~g--~~~~~d~lviAtG~~p~~~~~~g~~ 150 (455)
T 2yqu_A 73 VELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETG--EELEARYILIATGSAPLIPPWAQVD 150 (455)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTC--CEEEEEEEEECCCEEECCCTTBCCC
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEeeCC--EEEEecEEEECCCCCCCCCCCCCCC
Confidence 6788888877777777766666677777899999888776677778773 4 5789999999999999999998876
Q ss_pred c-ceeec--ccCC-CCCCcEEEeecc
Q psy7665 273 L-LRTLS--LLSG-VDPPTLIFLEHI 294 (296)
Q Consensus 273 ~-~~~~s--~~~~-~~~~~~~~~~~~ 294 (296)
. .+.++ .+.. ..+++++|++++
T Consensus 151 ~~~v~~~~~~~~~~~~~~~vvIiGgG 176 (455)
T 2yqu_A 151 YERVVTSTEALSFPEVPKRLIVVGGG 176 (455)
T ss_dssp SSSEECHHHHTCCSSCCSEEEEECCS
T ss_pred cCcEechHHhhccccCCCeEEEECCC
Confidence 4 45554 2332 346778887654
No 24
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.83 E-value=6.6e-20 Score=169.28 Aligned_cols=168 Identities=29% Similarity=0.408 Sum_probs=133.1
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMK 194 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (296)
.+||+|||||++|+.+|.+|++.|++|+||| +. .+||+|.+.+|+|++.+.......+.......+|++..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie--~~-------~~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~ 76 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVE--AG-------EVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAK 76 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEE--SS-------CTTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEe--CC-------CCCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCC
Confidence 5799999999999999999999999999999 33 58999999999999988877776666666666777622
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEEcceeEEEEeCeEEEcCCCCCCCCC-CCCCcc
Q psy7665 195 KSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPD-IPGARL 273 (296)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v~g~~~~~~a~~vV~AtG~~p~~p~-i~G~~~ 273 (296)
..+++..+..+.+...+.+...+...+++.+++++.++..+.+.+.+.+++ .++.||+||+|||++|..|+ +||. .
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~g--~~~~~d~lViATGs~p~~p~gi~~~-~ 153 (464)
T 2eq6_A 77 PELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVGPKEVEVGG--ERYGAKSLILATGSEPLELKGFPFG-E 153 (464)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETT--EEEEEEEEEECCCEEECCBTTBCCS-S
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEccCCEEEEcc--EEEEeCEEEEcCCCCCCCCCCCCCC-C
Confidence 267888888877777777766666777888999998887777778887775 57999999999999999886 8874 3
Q ss_pred ceeec--ccCCC--CCCcEEEeecc
Q psy7665 274 LRTLS--LLSGV--DPPTLIFLEHI 294 (296)
Q Consensus 274 ~~~~s--~~~~~--~~~~~~~~~~~ 294 (296)
.++++ .+..+ .|++++|++++
T Consensus 154 ~v~~~~~~~~l~~~~~~~vvViGgG 178 (464)
T 2eq6_A 154 DVWDSTRALKVEEGLPKRLLVIGGG 178 (464)
T ss_dssp SEECHHHHTCGGGCCCSEEEEECCS
T ss_pred cEEcHHHHHhhhhhcCCEEEEECCC
Confidence 45554 23332 57788888754
No 25
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.83 E-value=8.2e-20 Score=168.89 Aligned_cols=173 Identities=29% Similarity=0.429 Sum_probs=131.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhc-ccccCcc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATT-SDNFGFH 192 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~g~~ 192 (296)
..+||+|||||++|+.+|.+|++.|++|+||| +.+ .+||+|.+.+|+|++.+.......+.... ...++++
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE--~~~------~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~ 76 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIE--KRG------ALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVK 76 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEE--CSS------SSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEe--CCC------CccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcc
Confidence 45799999999999999999999999999999 666 78999999999999887776655555443 4455665
Q ss_pred ccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE---cceeEEEEeCeEEEcCCCCCCCCCC
Q psy7665 193 MKK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDI 268 (296)
Q Consensus 193 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v---~g~~~~~~a~~vV~AtG~~p~~p~i 268 (296)
... ..++..+..+.+...+.+...+...+++.+++++.++....+.+.+.+ +|+...+.+|+||+|||++|..|++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p~~ 156 (470)
T 1dxl_A 77 VSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPG 156 (470)
T ss_dssp ESCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEECCBTT
T ss_pred cCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCCCCCC
Confidence 433 567777777766666666666667777779999988776667777777 2333679999999999999999999
Q ss_pred CCCcc-ceeec--ccCC-CCCCcEEEeecc
Q psy7665 269 PGARL-LRTLS--LLSG-VDPPTLIFLEHI 294 (296)
Q Consensus 269 ~G~~~-~~~~s--~~~~-~~~~~~~~~~~~ 294 (296)
+|.+. .+.++ .+.. ..+++++|++++
T Consensus 157 ~g~~~~~v~~~~~~~~~~~~~~~vvViGgG 186 (470)
T 1dxl_A 157 VTIDEKKIVSSTGALALSEIPKKLVVIGAG 186 (470)
T ss_dssp BCCCSSSEECHHHHTTCSSCCSEEEESCCS
T ss_pred CCCCcccEEeHHHhhhhhhcCCeEEEECCC
Confidence 98764 45554 2332 346778887654
No 26
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.83 E-value=1.2e-19 Score=167.69 Aligned_cols=171 Identities=29% Similarity=0.460 Sum_probs=127.5
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhccccc-Cccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNF-GFHM 193 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-g~~~ 193 (296)
.+||+|||||++|+++|.+|++.|++|+||| +. .+||+|.+.+|+|++.+..............++ |++.
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie--~~-------~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~ 74 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIE--RG-------TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAA 74 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEE--SS-------STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEe--CC-------CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccC
Confidence 4799999999999999999999999999999 33 679999999999999888877666655555555 5543
Q ss_pred cc-cCCHHHHHHHHHHHHHHHHH-HHHHHHHHC-CcEEEcceEEEEeCCEEEE---cceeEEEEeCeEEEcCCCCCCCCC
Q psy7665 194 KK-SFTWKTLVDNVQKYIRNLNN-NYEKELEKN-KIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPD 267 (296)
Q Consensus 194 ~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~v~~~~~~~~~~~~~~v~v---~g~~~~~~a~~vV~AtG~~p~~p~ 267 (296)
.. ..++..+..+.+...+.+.. .+...+++. +++++.+++...+.+.+++ +|+...+.+|+||+|||++|+.|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~p~ 154 (467)
T 1zk7_A 75 TVPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQSLTVRLNEGGERVVMFDRCLVATGASPAVPP 154 (467)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETTEEEEEETTSSEEEEECSEEEECCCEEECCCC
T ss_pred CCCccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCCEEEEEeCCCceEEEEeCEEEEeCCCCCCCCC
Confidence 32 56777777666555554432 234556667 9999888777777777766 343467999999999999999999
Q ss_pred CCCCccc-eeec--ccC-CCCCCcEEEeecc
Q psy7665 268 IPGARLL-RTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 268 i~G~~~~-~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
+||.+.. ++++ .+. ...+++++||+++
T Consensus 155 i~G~~~~~~~~~~~~~~~~~~~~~vvViGgG 185 (467)
T 1zk7_A 155 IPGLKESPYWTSTEALASDTIPERLAVIGSS 185 (467)
T ss_dssp CTTTTTSCCBCHHHHHHCSSCCSEEEEECCS
T ss_pred CCCCCcCceecHHHHhcccccCCEEEEECCC
Confidence 9998642 4443 222 3346778887653
No 27
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.82 E-value=5e-19 Score=164.19 Aligned_cols=172 Identities=31% Similarity=0.448 Sum_probs=133.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+.+|.+|++.|++|+|+| +.+ .+||+|.+.+|+|++.+.........+.+...++++.
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE--~~~------~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~ 76 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVE--RYK------TLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKY 76 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEE--SSS------CSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEe--CCC------CCCCceeeecccchHHHHHHHHHHHHHHHHHhCCccc
Confidence 35899999999999999999999999999999 655 7899999999999998887777777776677777765
Q ss_pred cc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE---cc----------eeEEEEeCeEEEcC
Q psy7665 194 KK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF---AG----------EERTVSAQNFIIAV 259 (296)
Q Consensus 194 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v---~g----------~~~~~~a~~vV~At 259 (296)
.. .+++..+..+.....+.+...+...+++.+++++.++....+.+.+.+ ++ +..++.||+||+||
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAt 156 (482)
T 1ojt_A 77 PEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAA 156 (482)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECC
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEccCCEEEEEecCCcccccccccCcceEEEcCEEEECC
Confidence 44 678888888777777777666777778889999988776666666666 22 12568999999999
Q ss_pred CCCCCCCC-CCCCccceeec--ccCC-CCCCcEEEeecc
Q psy7665 260 GGRPTYPD-IPGARLLRTLS--LLSG-VDPPTLIFLEHI 294 (296)
Q Consensus 260 G~~p~~p~-i~G~~~~~~~s--~~~~-~~~~~~~~~~~~ 294 (296)
|++|..|+ +|. +..+.++ .+.. ..+++++|++++
T Consensus 157 Gs~p~~~~~i~~-~~~v~~~~~~~~~~~~~~~vvViGgG 194 (482)
T 1ojt_A 157 GSRVTKLPFIPE-DPRIIDSSGALALKEVPGKLLIIGGG 194 (482)
T ss_dssp CEEECCCSSCCC-CTTEECHHHHTTCCCCCSEEEEESCS
T ss_pred CCCCCCCCCCCc-cCcEEcHHHHhcccccCCeEEEECCC
Confidence 99998887 673 3345554 2333 346778888654
No 28
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.81 E-value=4.4e-19 Score=165.23 Aligned_cols=171 Identities=22% Similarity=0.357 Sum_probs=132.8
Q ss_pred cccEEEECCChHHHHHHHHHHhC---CCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASM---NKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGF 191 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~---G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~ 191 (296)
.+||+|||||++|+++|++|++. |++|+||| +. .+||+|.+.+|+|++.+............+..+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE--~~-------~~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~ 72 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVID--CD-------GIGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGF 72 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEE--SS-------CTTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTB
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEe--CC-------CcCCcccCcCccchHHHHHHHHHHHHHHHHHhCCC
Confidence 47999999999999999999999 99999999 33 57999999999999988888777777776777777
Q ss_pred c--ccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeC------CEEEE---cceeEEEEeCeEEEcC
Q psy7665 192 H--MKK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDK------HRVKF---AGEERTVSAQNFIIAV 259 (296)
Q Consensus 192 ~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~------~~v~v---~g~~~~~~a~~vV~At 259 (296)
+ ... .+++..+..+.+...+.+...+...+++.+++++.++....+. +.+.+ +++...+.+|++|+||
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviAT 152 (499)
T 1xdi_A 73 HIDFDDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVAT 152 (499)
T ss_dssp C------CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECC
T ss_pred ccccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcC
Confidence 5 222 5788888888777777777777777888899999887766555 56666 3422479999999999
Q ss_pred CCCCCCCCCCCCcc-ceeec--ccC-CCCCCcEEEeecc
Q psy7665 260 GGRPTYPDIPGARL-LRTLS--LLS-GVDPPTLIFLEHI 294 (296)
Q Consensus 260 G~~p~~p~i~G~~~-~~~~s--~~~-~~~~~~~~~~~~~ 294 (296)
|++|..|++||.+. .+.++ .+. ...+++++|++.+
T Consensus 153 Gs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~vvViGgG 191 (499)
T 1xdi_A 153 GASPRILPSAQPDGERILTWRQLYDLDALPDHLIVVGSG 191 (499)
T ss_dssp CEEECCCGGGCCCSSSEEEGGGGGGCSSCCSSEEEESCS
T ss_pred CCCCCCCCCCCCCcCcEEehhHhhhhhccCCeEEEECCC
Confidence 99999999999763 35554 222 2346778887653
No 29
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.81 E-value=5.1e-19 Score=163.35 Aligned_cols=171 Identities=26% Similarity=0.366 Sum_probs=129.1
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhh-cccccCccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEAT-TSDNFGFHM 193 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~g~~~ 193 (296)
.+||+|||||++|+++|..|++.|++|+|+| +. .+||+|.+.+|+|++.+.......+... ....++++.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE--~~-------~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~ 73 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVE--PK-------YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISG 73 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--SS-------CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEe--CC-------CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999999999999999999 32 5789999999999988777666555544 445566652
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE---cceeEEEEeCeEEEcCCCCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERTVSAQNFIIAVGGRPTYPDIPG 270 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v---~g~~~~~~a~~vV~AtG~~p~~p~i~G 270 (296)
...+++..+..+.....+.+...+...+++.+++++.++....+.+.+++ +|+..++.+|+||+|||++|..|+++|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~~~~g 153 (464)
T 2a8x_A 74 EVTFDYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFADANTLLVDLNDGGTESVTFDNAIIATGSSTRLVPGTS 153 (464)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEESSSSEEEEEETTSCCEEEEEEEEEECCCEEECCCTTCC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCCCCCC
Confidence 12567777777666666666666777778889999988776666666666 343357999999999999999999999
Q ss_pred Cccceeec--ccCC-CCCCcEEEeecc
Q psy7665 271 ARLLRTLS--LLSG-VDPPTLIFLEHI 294 (296)
Q Consensus 271 ~~~~~~~s--~~~~-~~~~~~~~~~~~ 294 (296)
.+..+.++ .+.. ..+++++|++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~vvViGgG 180 (464)
T 2a8x_A 154 LSANVVTYEEQILSRELPKSIIIAGAG 180 (464)
T ss_dssp CBTTEECHHHHHTCSSCCSEEEEECCS
T ss_pred CCceEEecHHHhhccccCCeEEEECCc
Confidence 76545554 2332 346778888654
No 30
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.78 E-value=2.1e-18 Score=159.78 Aligned_cols=170 Identities=29% Similarity=0.459 Sum_probs=126.8
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhh-cccccCccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEAT-TSDNFGFHM 193 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~g~~~ 193 (296)
.+||+|||||++|+.+|.+|++.|++|+|+| +.+ .+||+|.+.+|+|++.+.......+.+. .+..++++.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE--~~~------~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~ 76 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVE--KRG------KLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDV 76 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEE--SSS------SSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEe--cCC------CcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 5799999999999999999999999999999 555 7899999999999998887766665554 455666654
Q ss_pred -cc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE---cceeEE------EEeCeEEEcCCCC
Q psy7665 194 -KK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF---AGEERT------VSAQNFIIAVGGR 262 (296)
Q Consensus 194 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v---~g~~~~------~~a~~vV~AtG~~ 262 (296)
.. .+++..+..+.....+.+...+...+++.+++++.++....+.+.+.+ +|.... +.||+||+|||++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~ 156 (478)
T 1v59_A 77 NGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSE 156 (478)
T ss_dssp CSCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEESSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEE
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccCCeEEEEecCCCcccccccceEEeCEEEECcCCC
Confidence 22 567888877777777777766777788889999988876666666666 332234 8999999999998
Q ss_pred CCCCCCCCCc---cceeec--ccCC-CCCCcEEEeecc
Q psy7665 263 PTYPDIPGAR---LLRTLS--LLSG-VDPPTLIFLEHI 294 (296)
Q Consensus 263 p~~p~i~G~~---~~~~~s--~~~~-~~~~~~~~~~~~ 294 (296)
|. .+||.+ ..+.++ .+.. ..+++++|++++
T Consensus 157 p~--~~~g~~~~~~~v~~~~~~~~~~~~~~~vvViGgG 192 (478)
T 1v59_A 157 VT--PFPGIEIDEEKIVSSTGALSLKEIPKRLTIIGGG 192 (478)
T ss_dssp EC--CCTTCCCCSSSEECHHHHTTCSSCCSEEEEECCS
T ss_pred CC--CCCCCCCCCceEEcHHHHHhhhccCceEEEECCC
Confidence 73 345543 124444 2222 346778888654
No 31
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.77 E-value=2.6e-18 Score=160.93 Aligned_cols=166 Identities=27% Similarity=0.403 Sum_probs=118.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+++|.+|++.|++|+||| +.+ .+||+|.+.+|+|++.+...............+++ +
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE--~~~------~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~-~ 112 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVD--RWP------FLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYW-F 112 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEE--SSS------SSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTT-C
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEe--CCC------CCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCc-H
Confidence 46899999999999999999999999999999 554 58999999999999988877666665555555554 1
Q ss_pred ccc----CCHHHHHHHHHHHHHHHHHHHHHHH-----HHCCcEEE-cceEEEEeCCEEEEcceeEEEEeCeEEEcCCCCC
Q psy7665 194 KKS----FTWKTLVDNVQKYIRNLNNNYEKEL-----EKNKIDYF-NAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRP 263 (296)
Q Consensus 194 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~-~~~~~~~~~~~v~v~g~~~~~~a~~vV~AtG~~p 263 (296)
... ++...+..++...... ....+ ++.+++++ .+++...+.+.+.+++ ..+.+|+||+|||++|
T Consensus 113 ~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~g--~~~~~d~lViATGs~p 186 (523)
T 1mo9_A 113 PDMTEKVVGIKEVVDLFRAGRNG----PHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAAG--KVFKAKNLILAVGAGP 186 (523)
T ss_dssp CCCTTCCCCHHHHHHHHHHHTHH----HHHHHHHHHHHTSCCCEEESSCCEEEETTEEEETT--EEEEBSCEEECCCEEC
T ss_pred HHHHhhhhhHHHHHHHHHhhhhh----hhhhhhhcccccCCcEEEEeeEEEEeeCCEEEECC--EEEEeCEEEECCCCCC
Confidence 111 1133333333221110 01334 66799998 7777667777787765 6799999999999999
Q ss_pred CCCCCCCCccc-eeec--cc-C-CCCC-CcEEEeecc
Q psy7665 264 TYPDIPGARLL-RTLS--LL-S-GVDP-PTLIFLEHI 294 (296)
Q Consensus 264 ~~p~i~G~~~~-~~~s--~~-~-~~~~-~~~~~~~~~ 294 (296)
..|++||.+.. ++++ .+ . ...+ ++++|++++
T Consensus 187 ~~p~i~G~~~~~v~~~~~~~~~l~~~~g~~vvViGgG 223 (523)
T 1mo9_A 187 GTLDVPGVNAKGVFDHATLVEELDYEPGSTVVVVGGS 223 (523)
T ss_dssp CCCCSTTTTSBTEEEHHHHHHHCCSCCCSEEEEECCS
T ss_pred CCCCCCCcccCcEeeHHHHHHHHHhcCCCeEEEECCC
Confidence 99999998743 5554 23 2 3346 678877653
No 32
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.72 E-value=3.1e-17 Score=143.43 Aligned_cols=139 Identities=21% Similarity=0.218 Sum_probs=90.6
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
.+|||+||||||||++||.+|+++|++|+||| +. .+||+|.+.+|+|.. .++.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE--~~-------~~gG~~~~~~~i~~~-----------------p~~~- 57 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIE--RG-------IPGGQMANTEEVENF-----------------PGFE- 57 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEE--SS-------CTTGGGGGCSCBCCS-----------------TTCS-
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEe--cC-------CCCCeeecccccCCc-----------------CCcc-
Confidence 57999999999999999999999999999999 32 789999999887531 1111
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceE-E-EEeCCEEEE--cceeEEEEeCeEEEcCCCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKA-V-FVDKHRVKF--AGEERTVSAQNFIIAVGGRPTYPDIP 269 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~~~~~v~v--~g~~~~~~a~~vV~AtG~~p~~p~i~ 269 (296)
.....++.... .....+....+..... . ........+ ++ .++.||+||+|||++|+.|++|
T Consensus 58 --~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~liiAtGs~~~~~~ip 122 (312)
T 4gcm_A 58 --MITGPDLSTKM-----------FEHAKKFGAVYQYGDIKSVEDKGEYKVINFGN--KELTAKAVIIATGAEYKKIGVP 122 (312)
T ss_dssp --SBCHHHHHHHH-----------HHHHHHTTCEEEECCCCEEEECSSCEEEECSS--CEEEEEEEEECCCEEECCCCCT
T ss_pred --ccchHHHHHHH-----------HHHHhhccccccceeeeeeeeeecceeeccCC--eEEEeceeEEcccCccCcCCCC
Confidence 22233322221 2223334455443321 1 122222222 44 6799999999999999999999
Q ss_pred CCccceeec-------ccCCCCCCcEEEeecc
Q psy7665 270 GARLLRTLS-------LLSGVDPPTLIFLEHI 294 (296)
Q Consensus 270 G~~~~~~~s-------~~~~~~~~~~~~~~~~ 294 (296)
|.+++.... ......+++++||+++
T Consensus 123 G~~~~~~~~v~~~~~~~~~~~~~k~vvViGgG 154 (312)
T 4gcm_A 123 GEQELGGRGVSYCAVCDGAFFKNKRLFVIGGG 154 (312)
T ss_dssp TTTTTBTTTEESCHHHHGGGGTTCEEEEECCS
T ss_pred ChhhhCCccEEeeeccCccccCCCEEEEECCC
Confidence 987543221 1223346788888754
No 33
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.68 E-value=5.1e-17 Score=141.87 Aligned_cols=146 Identities=18% Similarity=0.201 Sum_probs=92.0
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMK 194 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (296)
.|||+||||||||++||.+|+++|++|+|+| +. ..||.|.+ +|+|++...+ ...+++.
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE--~~-------~~gg~~~~-G~~~~~~~i~-----------~~~g~~~- 61 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYE--GF-------MAGGVAAG-GQLTTTTIIE-----------NFPGFPN- 61 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEEC--CS-------SGGGCCTT-CGGGGSSEEC-----------CSTTCTT-
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEe--cC-------CCCCcccC-CCcCChHHhh-----------hccCCcc-
Confidence 4899999999999999999999999999999 32 56777765 6766532110 1112221
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEE--eCC-EEEEcceeEEEEeCeEEEcCCCCCCCCCCCCC
Q psy7665 195 KSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFV--DKH-RVKFAGEERTVSAQNFIIAVGGRPTYPDIPGA 271 (296)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~-~v~v~g~~~~~~a~~vV~AtG~~p~~p~i~G~ 271 (296)
.++..++..+ +...+++.++++........ ... ...+.++..++.+|+||+|||++|+.|++||.
T Consensus 62 -~i~~~~l~~~-----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~~~ipG~ 129 (314)
T 4a5l_A 62 -GIDGNELMMN-----------MRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGE 129 (314)
T ss_dssp -CEEHHHHHHH-----------HHHHHHHTTCEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECCCCCTTH
T ss_pred -cCCHHHHHHH-----------HHHHHhhcCcEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccccccCCCcc
Confidence 2333333332 23334556777766554322 122 22222222679999999999999999999998
Q ss_pred ccceeec---------ccCCCCCCcEEEeecc
Q psy7665 272 RLLRTLS---------LLSGVDPPTLIFLEHI 294 (296)
Q Consensus 272 ~~~~~~s---------~~~~~~~~~~~~~~~~ 294 (296)
+.+.... ......+++++++.++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG 161 (314)
T 4a5l_A 130 DKYWQNGVSACAICDGAVPIFRNKVLMVVGGG 161 (314)
T ss_dssp HHHBTTTEESCHHHHTTSGGGTTSEEEEECSS
T ss_pred ccccccceeeehhhhhhhhhcCCCeEEEECCC
Confidence 7443221 1112345678887754
No 34
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.66 E-value=2.9e-16 Score=136.87 Aligned_cols=118 Identities=21% Similarity=0.351 Sum_probs=74.1
Q ss_pred CccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcc
Q psy7665 113 TYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFH 192 (296)
Q Consensus 113 ~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~ 192 (296)
+..|||+||||||+|++||++|+++|++|+||| +. ..||.+... .+++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie--~~-------~~gg~~~~~----------------------~~~~~ 52 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFD--NN-------TNRNRVTQN----------------------SHGFI 52 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEE--CS-------CCGGGGSSC----------------------BCCST
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEe--CC-------CCCCeeeee----------------------cCCcc
Confidence 456999999999999999999999999999999 33 445533111 11221
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CcEEEcceEEEE---eC--CEEEE-cceeEEEEeCeEEEcCCCCCCC
Q psy7665 193 MKKSFTWKTLVDNVQKYIRNLNNNYEKELEKN-KIDYFNAKAVFV---DK--HRVKF-AGEERTVSAQNFIIAVGGRPTY 265 (296)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~---~~--~~v~v-~g~~~~~~a~~vV~AtG~~p~~ 265 (296)
........++.... ...+.+. .+.++....... +. +.+.. ++ .++.||+||+|||++|+.
T Consensus 53 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g--~~~~a~~liiATGs~p~~ 119 (304)
T 4fk1_A 53 TRDGIKPEEFKEIG-----------LNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDH--TKYLAERVLLATGMQEEF 119 (304)
T ss_dssp TCTTBCHHHHHHHH-----------HHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTC--CEEEEEEEEECCCCEEEC
T ss_pred CCCCCCHHHHHHHH-----------HHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCC--CEEEeCEEEEccCCcccc
Confidence 11122333333221 1222332 455555544322 22 23444 55 679999999999999999
Q ss_pred CCCCCCccc
Q psy7665 266 PDIPGARLL 274 (296)
Q Consensus 266 p~i~G~~~~ 274 (296)
|++||.+++
T Consensus 120 p~i~G~~~~ 128 (304)
T 4fk1_A 120 PSIPNVREY 128 (304)
T ss_dssp CSCTTHHHH
T ss_pred ccccCcccc
Confidence 999998754
No 35
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.53 E-value=5.2e-14 Score=132.08 Aligned_cols=158 Identities=18% Similarity=0.178 Sum_probs=90.6
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhh---hhHHHhhcccccC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRAS---LLNEEATTSDNFG 190 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~---~~~~~~~~~~~~g 190 (296)
..+||+|||||++|+.+|.+|++.|.+|+||| +.+ .+||+|. ..++|........ .+.........+.
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE--~~~------~~GGtw~-~~~yPg~~~d~~~~~y~~~f~~~~~~~~~ 78 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIE--AGE------DVGGTWY-WNRYPGCRLDTESYAYGYFALKGIIPEWE 78 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSS------SSCTHHH-HCCCTTCBCSSCHHHHCHHHHTTSSTTCC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEe--CCC------CCCCccc-cCCCCceeecCchhhcccccCcccccCCC
Confidence 45799999999999999999999999999999 666 8899984 3344421110000 0000001111122
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCc--EEEcc-eE---EEEe---CCEEEE-cceeEEEEeCeEEEcCC
Q psy7665 191 FHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKI--DYFNA-KA---VFVD---KHRVKF-AGEERTVSAQNFIIAVG 260 (296)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~-~~---~~~~---~~~v~v-~g~~~~~~a~~vV~AtG 260 (296)
+... ..+..++..++....+.+ ++ .+..+ ++ .+.+ .+.|++ +| .++.||+||+|+|
T Consensus 79 ~~~~-~~~~~ei~~yl~~~~~~~-----------~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--~~~~ad~lV~AtG 144 (545)
T 3uox_A 79 WSEN-FASQPEMLRYVNRAADAM-----------DVRKHYRFNTRVTAARYVENDRLWEVTLDNE--EVVTCRFLISATG 144 (545)
T ss_dssp CSBS-SCBHHHHHHHHHHHHHHH-----------TCGGGEECSCCEEEEEEEGGGTEEEEEETTT--EEEEEEEEEECCC
T ss_pred cccc-CCCHHHHHHHHHHHHHHc-----------CCcCcEEECCEEEEEEEeCCCCEEEEEECCC--CEEEeCEEEECcC
Confidence 2111 344555555555444433 22 23222 21 1222 135555 55 5789999999999
Q ss_pred --CCCCCCCCCCCcccee----ecccC----------CCCCCcEEEeecc
Q psy7665 261 --GRPTYPDIPGARLLRT----LSLLS----------GVDPPTLIFLEHI 294 (296)
Q Consensus 261 --~~p~~p~i~G~~~~~~----~s~~~----------~~~~~~~~~~~~~ 294 (296)
++|..|++||.+.|.. ++.|. ...+++++||+.+
T Consensus 145 ~~s~p~~p~ipG~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G 194 (545)
T 3uox_A 145 PLSASRMPDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTG 194 (545)
T ss_dssp SCBC---CCCTTGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCS
T ss_pred CCCCCcCCCCCCccccCCCeEEcccccccccccccccccCCCeEEEECCC
Confidence 7899999999886532 22222 2245667777654
No 36
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.52 E-value=8.7e-14 Score=121.09 Aligned_cols=139 Identities=17% Similarity=0.178 Sum_probs=89.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEE-EeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVAL-FDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFH 192 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~i-iE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~ 192 (296)
..+||+|||||++|+++|.+|++.|++|+| +| + + .+||.|.+..+++. ..+++
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e--~-~------~~gG~~~~~~~~~~-----------------~~~~~ 56 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFE--K-G------MPGGQITSSSEIEN-----------------YPGVA 56 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEEC--S-S------STTGGGGGCSCBCC-----------------STTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEe--C-C------CCCceeeeeceecc-----------------CCCCC
Confidence 347999999999999999999999999999 99 5 4 67887755433210 11111
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEE-eC--CEEE--E-cceeEEEEeCeEEEcCCCCCCCC
Q psy7665 193 MKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFV-DK--HRVK--F-AGEERTVSAQNFIIAVGGRPTYP 266 (296)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~--~~v~--v-~g~~~~~~a~~vV~AtG~~p~~p 266 (296)
. ......+..+ +...+++.+++++.++.... +. ..+. + ++. .+.+|+||+|||+.|+.|
T Consensus 57 ~--~~~~~~~~~~-----------~~~~~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~--~~~~d~lvlAtG~~~~~~ 121 (315)
T 3r9u_A 57 Q--VMDGISFMAP-----------WSEQCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGK--TELAKAVIVCTGSAPKKA 121 (315)
T ss_dssp S--CBCHHHHHHH-----------HHHHHTTTCCEEECCCEEEEEECTTSCEEEEETTSC--EEEEEEEEECCCEEECCC
T ss_pred C--CCCHHHHHHH-----------HHHHHHHcCcEEEEEEEEEEecCCCCcEEEEEecCC--EEEeCEEEEeeCCCCCCC
Confidence 0 2233333333 33445556888887755433 33 2344 5 332 789999999999999999
Q ss_pred CCCCCccceeecc-------cCCCCCCcEEEeec
Q psy7665 267 DIPGARLLRTLSL-------LSGVDPPTLIFLEH 293 (296)
Q Consensus 267 ~i~G~~~~~~~s~-------~~~~~~~~~~~~~~ 293 (296)
++||.+.+....+ .....+++++++..
T Consensus 122 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~ 155 (315)
T 3r9u_A 122 GFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGG 155 (315)
T ss_dssp CCBTTTTTBTTTEESCHHHHGGGGTTSEEEEECC
T ss_pred CCCChhhcCCCeEEeeecccccccCcCEEEEECC
Confidence 9999875322111 12234566777754
No 37
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.52 E-value=8.9e-14 Score=119.99 Aligned_cols=136 Identities=20% Similarity=0.299 Sum_probs=83.4
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMK 194 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (296)
.+||+|||||++|+++|.+|++.|++|+|+| +.. ..+..+.. .++++..
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie--~~~------~~~~~~~~-----------------------~~~~~~~ 50 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVD--AGE------RRNRFASH-----------------------SHGFLGQ 50 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEE--CCC------CGGGGCSC-----------------------CCSSTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEe--CCC------cccccchh-----------------------hcCCcCC
Confidence 3799999999999999999999999999999 432 11111000 0111111
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CcEEEcceEEEEe--C--CEEEE-cceeEEEEeCeEEEcCCCCCCCCCC
Q psy7665 195 KSFTWKTLVDNVQKYIRNLNNNYEKELEKN-KIDYFNAKAVFVD--K--HRVKF-AGEERTVSAQNFIIAVGGRPTYPDI 268 (296)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~--~--~~v~v-~g~~~~~~a~~vV~AtG~~p~~p~i 268 (296)
...+...+..++ ...+.+. +++++.+++...+ . +.+.+ ++ ..+.||+||+|||++|+.|++
T Consensus 51 ~~~~~~~~~~~~-----------~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~vviAtG~~~~~~~~ 117 (297)
T 3fbs_A 51 DGKAPGEIIAEA-----------RRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGG--RRETAGRLILAMGVTDELPEI 117 (297)
T ss_dssp TTCCHHHHHHHH-----------HHHHTTCTTEEEEESCEEEEEEETTEEEEEETTS--CEEEEEEEEECCCCEEECCCC
T ss_pred CCCCHHHHHHHH-----------HHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCC--CEEEcCEEEECCCCCCCCCCC
Confidence 122333333332 3334444 6777766554332 2 34555 45 579999999999999999999
Q ss_pred CCCcccee----ecc---cCCCCCCcEEEeecc
Q psy7665 269 PGARLLRT----LSL---LSGVDPPTLIFLEHI 294 (296)
Q Consensus 269 ~G~~~~~~----~s~---~~~~~~~~~~~~~~~ 294 (296)
||.+.+.. ++. .....++++++++.+
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G 150 (297)
T 3fbs_A 118 AGLRERWGSAVFHCPYCHGYELDQGKIGVIAAS 150 (297)
T ss_dssp BTTGGGBTTTEESCHHHHTGGGTTCEEEEECCS
T ss_pred CCchhhcCCeeEEcccCcchhhcCCEEEEEecC
Confidence 99875432 221 112245667777653
No 38
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.52 E-value=1.9e-13 Score=119.91 Aligned_cols=140 Identities=19% Similarity=0.180 Sum_probs=89.0
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+++|.+|++.|++|+|+| +. .+||.|.+..++. ...+++.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie--~~-------~~gg~~~~~~~~~-----------------~~~~~~~ 60 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILE--KG-------MPGGQIAWSEEVE-----------------NFPGFPE 60 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEE--SS-------CTTGGGGGCSCBC-----------------CSTTCSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEe--CC-------CCCcccccccccc-----------------cCCCCCC
Confidence 45799999999999999999999999999999 33 4677765543221 0111111
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEE--e---C--CEEEE-cceeEEEEeCeEEEcCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFV--D---K--HRVKF-AGEERTVSAQNFIIAVGGRPTY 265 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~---~--~~v~v-~g~~~~~~a~~vV~AtG~~p~~ 265 (296)
.+.+..+.. .+...+++.+++++.++.... . . +.+.. ++ ..+.||+||+|||++|..
T Consensus 61 --~~~~~~~~~-----------~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g--~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 61 --PIAGMELAQ-----------RMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYN--GEYRAKAVILATGADPRK 125 (325)
T ss_dssp --CBCHHHHHH-----------HHHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESS--CEEEEEEEEECCCEEECC
T ss_pred --CCCHHHHHH-----------HHHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCC--CEEEeCEEEECcCCCcCC
Confidence 122322222 233445566888876654332 2 2 35544 55 578999999999999999
Q ss_pred CCCCCCccce----eec---ccCCCCCCcEEEeecc
Q psy7665 266 PDIPGARLLR----TLS---LLSGVDPPTLIFLEHI 294 (296)
Q Consensus 266 p~i~G~~~~~----~~s---~~~~~~~~~~~~~~~~ 294 (296)
|++||.+++. ..+ .......+++++++.+
T Consensus 126 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G 161 (325)
T 2q7v_A 126 LGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGG 161 (325)
T ss_dssp CCCTTTTTTBTTTEESCHHHHGGGGTTCEEEEECCS
T ss_pred CCCCChhhccCceEEEeccCCHHHcCCCEEEEECCC
Confidence 9999986532 111 1112334677777653
No 39
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.51 E-value=9.3e-14 Score=127.47 Aligned_cols=162 Identities=17% Similarity=0.148 Sum_probs=91.7
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC--cEEEEeccCCCCCCcccccCCeeeccCCC------chhHH------------
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK--KVALFDFVTPSQHGTVWGLGGTCVNVGCI------PKKLF------------ 173 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE~~~~~~~g~~~~~GG~~~~~~~~------p~~~~------------ 173 (296)
..+||+|||||++|+++|.+|++.|. +|+||| +.+ .+||.|.+..+. |....
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E--~~~------~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~ 76 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFE--RRG------SPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAA 76 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEEC--SSS------SSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEe--cCC------CCCCeecCCCCCCcccccccccccccccccccccc
Confidence 34699999999999999999999999 999999 666 678888665431 11000
Q ss_pred --------HH--hhhhHHHhhcccccCccccc--cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcce-EEEE--eC
Q psy7665 174 --------HR--ASLLNEEATTSDNFGFHMKK--SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK-AVFV--DK 238 (296)
Q Consensus 174 --------~~--~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~ 238 (296)
+. ..........+..+.++... .+.+..+.+++..+.+.+ +..+..++ +..+ ..
T Consensus 77 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----------~~~i~~~t~V~~v~~~~ 145 (447)
T 2gv8_A 77 LPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPL-----------LPFIKLATDVLDIEKKD 145 (447)
T ss_dssp CCBCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGG-----------GGGEECSEEEEEEEEET
T ss_pred cCCccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----------hCeEEeCCEEEEEEeCC
Confidence 00 00000001111111111110 233445555554444332 23343322 2211 22
Q ss_pred --CEEEE-c---ce-eEEEEeCeEEEcCCC--CCCCCCCCCCccc-------eeecc--cCC--CCCCcEEEeecc
Q psy7665 239 --HRVKF-A---GE-ERTVSAQNFIIAVGG--RPTYPDIPGARLL-------RTLSL--LSG--VDPPTLIFLEHI 294 (296)
Q Consensus 239 --~~v~v-~---g~-~~~~~a~~vV~AtG~--~p~~p~i~G~~~~-------~~~s~--~~~--~~~~~~~~~~~~ 294 (296)
+.|++ + |+ ..++.||+||+|||. .|+.|++||.+++ +.++. ... ...++++||+.+
T Consensus 146 ~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G 221 (447)
T 2gv8_A 146 GSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGA 221 (447)
T ss_dssp TEEEEEEEESSTTCCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSS
T ss_pred CeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccC
Confidence 45555 3 43 347899999999998 8888999998643 45442 111 135678887654
No 40
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.51 E-value=3.6e-13 Score=124.14 Aligned_cols=160 Identities=12% Similarity=0.171 Sum_probs=91.2
Q ss_pred ccEEEECCChHHHHHHHHHHh---CCCc---EEEEeccCCCCCCcccccCCeeecc---CCCchhHHHHhhhhH----HH
Q psy7665 116 YDLCVIGGGSGGISAAKEAAS---MNKK---VALFDFVTPSQHGTVWGLGGTCVNV---GCIPKKLFHRASLLN----EE 182 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~---~G~~---V~iiE~~~~~~~g~~~~~GG~~~~~---~~~p~~~~~~~~~~~----~~ 182 (296)
+||+|||||++|+++|.+|++ .|.+ |+||| +.+ .+||.|.+. +|.+.........+. +.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E--~~~------~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~ 74 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFE--KQA------DWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNG 74 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEEC--SSS------SSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEE--cCC------CCCCEeecCCCCCccccCCCCcCccccchhhcC
Confidence 589999999999999999999 9999 99999 666 788888653 232210000000000 00
Q ss_pred hh-cccccCccc--------cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcE--EEcc-eEEEE--e----CCEEEE-
Q psy7665 183 AT-TSDNFGFHM--------KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKID--YFNA-KAVFV--D----KHRVKF- 243 (296)
Q Consensus 183 ~~-~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~-~~~~~--~----~~~v~v- 243 (296)
.. .+...++++ ...++...+..++..+++ +.+++ +..+ ++..+ . .+.|++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-----------~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~ 143 (464)
T 2xve_A 75 PKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVE-----------KAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQ 143 (464)
T ss_dssp CGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHH-----------HHTCGGGEECSEEEEEEEEETTTTEEEEEEE
T ss_pred ChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHH-----------HcCCcceEEeCCEEEEEEEcCCCCcEEEEEE
Confidence 00 000011111 012334444444444333 33554 4433 22221 1 235665
Q ss_pred c---ceeEEEEeCeEEEcCC--CCCCCCCCCCCccc---eeecc--cCC--CCCCcEEEeecc
Q psy7665 244 A---GEERTVSAQNFIIAVG--GRPTYPDIPGARLL---RTLSL--LSG--VDPPTLIFLEHI 294 (296)
Q Consensus 244 ~---g~~~~~~a~~vV~AtG--~~p~~p~i~G~~~~---~~~s~--~~~--~~~~~~~~~~~~ 294 (296)
+ |+..++.||+||+||| +.|+.|++||.+.+ ++++. ... ..+++++||+.+
T Consensus 144 ~~~~g~~~~~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G 206 (464)
T 2xve_A 144 DHTTDTIYSEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSS 206 (464)
T ss_dssp ETTTTEEEEEEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCS
T ss_pred EcCCCceEEEEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCC
Confidence 3 3346789999999999 79999999998764 34442 111 245678887754
No 41
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.50 E-value=8.7e-14 Score=130.70 Aligned_cols=155 Identities=18% Similarity=0.262 Sum_probs=92.5
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeecc---CC---CchhHHHHhhhhHHHhhccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNV---GC---IPKKLFHRASLLNEEATTSD 187 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~---~~---~p~~~~~~~~~~~~~~~~~~ 187 (296)
..+||+|||||++|+.+|.+|++.|.+|+||| +.+ .+||+|... +| +|+..+...... +.. .
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE--~~~------~~GGtw~~~~ypg~~~dv~s~~y~~~f~~-~~~---~ 87 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFE--AAS------GVGGVWYWNRYPGARCDVESIDYSYSFSP-ELE---Q 87 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSS------SSCTHHHHCCCTTCBCSSCTTTSSCCSCH-HHH---H
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEe--CCC------CCCCccccCCCCCceeCCCchhccccccc-ccc---c
Confidence 45799999999999999999999999999999 666 889998533 33 443322211000 000 0
Q ss_pred ccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCc--EEEcc-eEE---EEeC---CEEEE-cceeEEEEeCeEEE
Q psy7665 188 NFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKI--DYFNA-KAV---FVDK---HRVKF-AGEERTVSAQNFII 257 (296)
Q Consensus 188 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~-~~~---~~~~---~~v~v-~g~~~~~~a~~vV~ 257 (296)
.+.+... ..+..++..++.... ++.++ .+..+ ++. +.+. +.|++ +| .++.||+||+
T Consensus 88 ~~~~~~~-~~~~~ei~~yl~~~~-----------~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G--~~i~ad~lV~ 153 (549)
T 4ap3_A 88 EWNWSEK-YATQPEILAYLEHVA-----------DRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG--DEVSARFLVV 153 (549)
T ss_dssp HCCCSSS-SCBHHHHHHHHHHHH-----------HHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC--CEEEEEEEEE
T ss_pred CCCCccC-CCCHHHHHHHHHHHH-----------HHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC--CEEEeCEEEE
Confidence 1111110 234444444444333 33344 34333 221 1222 25555 55 4689999999
Q ss_pred cCC--CCCCCCCCCCCccce---eec-ccC----CCCCCcEEEeecc
Q psy7665 258 AVG--GRPTYPDIPGARLLR---TLS-LLS----GVDPPTLIFLEHI 294 (296)
Q Consensus 258 AtG--~~p~~p~i~G~~~~~---~~s-~~~----~~~~~~~~~~~~~ 294 (296)
||| ++|..|++||.++|. +++ .|. ...+++++||+.+
T Consensus 154 AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~~krV~VIG~G 200 (549)
T 4ap3_A 154 AAGPLSNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTG 200 (549)
T ss_dssp CCCSEEECCCCCCTTGGGCCSEEEEGGGCCTTCCCCBTCEEEEECCS
T ss_pred CcCCCCCCCCCCCCCcccCCCceEEeccccccccccCCCEEEEECCC
Confidence 999 799999999998653 222 222 1235567777654
No 42
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.50 E-value=1.1e-13 Score=120.51 Aligned_cols=136 Identities=18% Similarity=0.302 Sum_probs=87.3
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKK 195 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~ 195 (296)
+||+|||||++|+++|.+|++.|++|+|+| + ..||.|.....++. ..+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~--~--------~~gG~~~~~~~~~~-----------------~~~~~--- 51 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMG--E--------RFGGQILDTVDIEN-----------------YISVP--- 51 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEC--S--------STTGGGGGCCEECC-----------------BTTBS---
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEe--C--------CCCceecccccccc-----------------ccCcC---
Confidence 799999999999999999999999999998 2 45777644322110 00110
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcc-eEEEEe-------CCEEEE-cceeEEEEeCeEEEcCCCCCCCC
Q psy7665 196 SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNA-KAVFVD-------KHRVKF-AGEERTVSAQNFIIAVGGRPTYP 266 (296)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~-------~~~v~v-~g~~~~~~a~~vV~AtG~~p~~p 266 (296)
..+...+. ..+...+++.+++++.+ ++...+ .+.+.+ ++ ..+.||+||+|||++|..|
T Consensus 52 ~~~~~~~~-----------~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g--~~~~~~~lv~AtG~~~~~~ 118 (310)
T 1fl2_A 52 KTEGQKLA-----------GALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASG--AVLKARSIIVATGAKWRNM 118 (310)
T ss_dssp SEEHHHHH-----------HHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTS--CEEEEEEEEECCCEEECCC
T ss_pred CCCHHHHH-----------HHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCC--CEEEeCEEEECcCCCcCCC
Confidence 11222222 22334456678998877 554442 234555 44 5689999999999999999
Q ss_pred CCCCCccceeeccc-------CCCCCCcEEEeecc
Q psy7665 267 DIPGARLLRTLSLL-------SGVDPPTLIFLEHI 294 (296)
Q Consensus 267 ~i~G~~~~~~~s~~-------~~~~~~~~~~~~~~ 294 (296)
++||.+++.....+ ....++++++++.+
T Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G 153 (310)
T 1fl2_A 119 NVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGG 153 (310)
T ss_dssp CCTTTTTTBTTTEESCHHHHGGGGBTCEEEEECCS
T ss_pred CCCChhhcccceeEEeccCcHhhcCCCEEEEECCC
Confidence 99998654221111 12345677777643
No 43
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.49 E-value=1.4e-13 Score=128.94 Aligned_cols=155 Identities=18% Similarity=0.292 Sum_probs=91.3
Q ss_pred ccccEEEECCChHHHHHHHHHH-hCCCcEEEEeccCCCCCCcccccCCeeecc---CC---CchhHHHHhhhhHHHhhcc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAA-SMNKKVALFDFVTPSQHGTVWGLGGTCVNV---GC---IPKKLFHRASLLNEEATTS 186 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~-~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~---~~---~p~~~~~~~~~~~~~~~~~ 186 (296)
..+||+|||||++|+.+|..|+ +.|.+|+|+| +.+ .+||+|... +| +|+..+..... ... .
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE--~~~------~~GGtw~~~~ypg~~~d~~s~~~~~~~~--~~~--~ 74 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFD--KAD------GPGGTWYWNRYPGALSDTESHLYRFSFD--RDL--L 74 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEE--SSS------SSCTHHHHCCCTTCEEEEEGGGSSCCSC--HHH--H
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEE--CCC------CCCCcccccCCCCceecCCcceeeeccc--ccc--c
Confidence 4579999999999999999999 9999999999 666 789988543 33 33322221100 000 0
Q ss_pred cccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCc--EEEcc-eEE---EEeC---CEEEE-cceeEEEEeCeEE
Q psy7665 187 DNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKI--DYFNA-KAV---FVDK---HRVKF-AGEERTVSAQNFI 256 (296)
Q Consensus 187 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~-~~~---~~~~---~~v~v-~g~~~~~~a~~vV 256 (296)
..+++... ..+..++..++... +++.++ ++..+ ++. ..+. +.|++ +| .++.||+||
T Consensus 75 ~~~~~~~~-~~~~~ei~~~l~~~-----------~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G--~~i~ad~lV 140 (540)
T 3gwf_A 75 QESTWKTT-YITQPEILEYLEDV-----------VDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG--EVYRAKYVV 140 (540)
T ss_dssp HHCCCSBS-EEEHHHHHHHHHHH-----------HHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS--CEEEEEEEE
T ss_pred cCCCCccc-CCCHHHHHHHHHHH-----------HHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC--CEEEeCEEE
Confidence 01111110 22334444443333 333455 44332 221 1221 24555 55 468999999
Q ss_pred EcCC--CCCCCCCCCCCcccee---e-cccC---CCCCCcEEEeecc
Q psy7665 257 IAVG--GRPTYPDIPGARLLRT---L-SLLS---GVDPPTLIFLEHI 294 (296)
Q Consensus 257 ~AtG--~~p~~p~i~G~~~~~~---~-s~~~---~~~~~~~~~~~~~ 294 (296)
+||| ++|..|++||.++|.. + +.|. ...+++++||+.+
T Consensus 141 ~AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~krV~VIG~G 187 (540)
T 3gwf_A 141 NAVGLLSAINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTG 187 (540)
T ss_dssp ECCCSCCSBCCCCCTTGGGCCSEEEEGGGCCSSCCCTTSEEEEECCS
T ss_pred ECCcccccCCCCCCCCccccCCCEEEeecCCCccccccceEEEECCC
Confidence 9999 6899999999986522 2 2221 2345667777654
No 44
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.48 E-value=2.5e-13 Score=118.23 Aligned_cols=138 Identities=20% Similarity=0.192 Sum_probs=87.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK-KVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMK 194 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (296)
+||+|||||++|+++|..|++.|+ +|+|+| + . ..||.|.+..++. ...+++.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie--~-~------~~gg~~~~~~~~~-----------------~~~~~~~- 54 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFE--K-G------MPGGQITGSSEIE-----------------NYPGVKE- 54 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEEC--S-S------STTCGGGGCSCBC-----------------CSTTCCS-
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEc--C-C------CCCcccccccccc-----------------cCCCCcc-
Confidence 699999999999999999999999 999999 4 2 5678775543221 0111111
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEE--eCC--EEEE-cceeEEEEeCeEEEcCCCCCCCCCCC
Q psy7665 195 KSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFV--DKH--RVKF-AGEERTVSAQNFIIAVGGRPTYPDIP 269 (296)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~--~v~v-~g~~~~~~a~~vV~AtG~~p~~p~i~ 269 (296)
.++...+..++ ...+.+.+++++..+.... ... .+.+ ++ ..+.+|+||+|||++|..|++|
T Consensus 55 -~~~~~~~~~~l-----------~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~~~vv~AtG~~~~~~~~~ 120 (311)
T 2q0l_A 55 -VVSGLDFMQPW-----------QEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDG--KTFEAKSVIIATGGSPKRTGIK 120 (311)
T ss_dssp -CBCHHHHHHHH-----------HHHHHTTSCEEECSCEEEEEEETTEEEEEETTS--CEEEEEEEEECCCEEECCCCCB
T ss_pred -cCCHHHHHHHH-----------HHHHHHcCCEEEEEEEEEEEEcCCEEEEEEcCC--CEEECCEEEECCCCCCCCCCCC
Confidence 22333333322 2334556888876554322 233 4444 44 5789999999999999999999
Q ss_pred CCccc----eeec---ccCCCCCCcEEEeecc
Q psy7665 270 GARLL----RTLS---LLSGVDPPTLIFLEHI 294 (296)
Q Consensus 270 G~~~~----~~~s---~~~~~~~~~~~~~~~~ 294 (296)
|.+++ +... .......+++++++.+
T Consensus 121 g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G 152 (311)
T 2q0l_A 121 GESEYWGKGVSTCATCDGFFYKNKEVAVLGGG 152 (311)
T ss_dssp THHHHBTTTEESCHHHHGGGGTTSEEEEECCS
T ss_pred ChhhccCCcEEEeecCChhhcCCCEEEEECCC
Confidence 97643 2111 1112334667777643
No 45
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.48 E-value=5.1e-14 Score=132.27 Aligned_cols=158 Identities=16% Similarity=0.245 Sum_probs=89.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhh-----HHHhhcccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLL-----NEEATTSDN 188 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~-----~~~~~~~~~ 188 (296)
..+||+|||||++|+.+|.+|++.|.+|+|+| +.+ .+||+|.. .++|.......... .... ...
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE--~~~------~~GG~w~~-~~~pg~~~d~~~~~~~~~f~~~~--~~~ 83 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIE--TAG------DVGGVWYW-NRYPGARCDIESIEYCYSFSEEV--LQE 83 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSS------SSCTHHHH-CCCTTCBCSSCTTTSSCCSCHHH--HHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEe--CCC------CCCCcccc-cCCCceeecccccccccccChhh--hhc
Confidence 46799999999999999999999999999999 666 78998843 23442111000000 0000 000
Q ss_pred cCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcc-eE---EEEeC---CEEEE-cceeEEEEeCeEEEcCC
Q psy7665 189 FGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNA-KA---VFVDK---HRVKF-AGEERTVSAQNFIIAVG 260 (296)
Q Consensus 189 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~---~~~~~---~~v~v-~g~~~~~~a~~vV~AtG 260 (296)
+.+.. ...+..++..++..+.+.+. .+.++..+ ++ ...+. +.|++ +| .++.||+||+|+|
T Consensus 84 ~~~~~-~~~~~~~i~~yl~~~~~~~~---------l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G--~~~~ad~vV~AtG 151 (542)
T 1w4x_A 84 WNWTE-RYASQPEILRYINFVADKFD---------LRSGITFHTTVTAAAFDEATNTWTVDTNHG--DRIRARYLIMASG 151 (542)
T ss_dssp CCCCB-SSCBHHHHHHHHHHHHHHTT---------GGGGEECSCCEEEEEEETTTTEEEEEETTC--CEEEEEEEEECCC
T ss_pred cCccc-ccCCHHHHHHHHHHHHHHcC---------CCceEEcCcEEEEEEEcCCCCeEEEEECCC--CEEEeCEEEECcC
Confidence 11111 03344455555444433331 01233322 11 12222 35555 45 4689999999999
Q ss_pred --CCCCCCCCCCCccce----eecccC----CCCCCcEEEeecc
Q psy7665 261 --GRPTYPDIPGARLLR----TLSLLS----GVDPPTLIFLEHI 294 (296)
Q Consensus 261 --~~p~~p~i~G~~~~~----~~s~~~----~~~~~~~~~~~~~ 294 (296)
+.|..|++||.+.+. .++.|. ...++++++|+.+
T Consensus 152 ~~s~p~~p~i~G~~~f~G~~~hs~~~~~~~~~~~gk~V~VIG~G 195 (542)
T 1w4x_A 152 QLSVPQLPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTG 195 (542)
T ss_dssp SCCCCCCCCCTTGGGCCSEEEEGGGCCSSCCCCBTCEEEEECCS
T ss_pred CCCCCCCCCCCCcccCCCceEECCCCCCchhccCCCEEEEECCC
Confidence 578889999987553 233332 1134567777643
No 46
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.47 E-value=1.1e-13 Score=121.66 Aligned_cols=147 Identities=17% Similarity=0.196 Sum_probs=90.6
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+++|.+|+++|++|+|+| +.+ ...+..||.|....... .+.+++.
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie--~~~--~~~~~~gg~~~~~~~~~-----------------~~~~~~~ 79 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYE--GMM--ANGIAAGGQLTTTTEIE-----------------NFPGFPD 79 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEC--CSS--BTTBCTTCGGGGSSEEC-----------------CSTTCTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEe--cCC--CCCCCcCcccccchhhc-----------------ccCCCcc
Confidence 56899999999999999999999999999999 422 12226788764432110 0011111
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEE--eCCEEEE--c--ceeEEEEeCeEEEcCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFV--DKHRVKF--A--GEERTVSAQNFIIAVGGRPTYPD 267 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~v~v--~--g~~~~~~a~~vV~AtG~~p~~p~ 267 (296)
......+. ..+...+++.+++++.++.... ..+.+.+ . +....+.+|+||+|+|++|..|+
T Consensus 80 --~~~~~~~~-----------~~~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~~ 146 (338)
T 3itj_A 80 --GLTGSELM-----------DRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRMH 146 (338)
T ss_dssp --CEEHHHHH-----------HHHHHHHHHTTCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCCC
T ss_pred --cCCHHHHH-----------HHHHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCCC
Confidence 11222222 2234445666899887764333 2233443 1 22356899999999999999999
Q ss_pred CCCCccceeeccc---------CCCCCCcEEEeecc
Q psy7665 268 IPGARLLRTLSLL---------SGVDPPTLIFLEHI 294 (296)
Q Consensus 268 i~G~~~~~~~s~~---------~~~~~~~~~~~~~~ 294 (296)
+||.+.+....++ .....++.++++.+
T Consensus 147 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G 182 (338)
T 3itj_A 147 LPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGG 182 (338)
T ss_dssp CTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSS
T ss_pred CCCchhccCccEEEchhcccchhhcCCCEEEEECCC
Confidence 9997643322211 13345667777643
No 47
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.47 E-value=4.2e-13 Score=117.05 Aligned_cols=138 Identities=16% Similarity=0.232 Sum_probs=85.4
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
+.+||+|||||++|+++|.+|+++|++|+|+| + .+||.|.+.... ....+++
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie--~--------~~gg~~~~~~~~-----------------~~~~~~~- 65 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIG--E--------TPGGQLTEAGIV-----------------DDYLGLI- 65 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEE--S--------STTGGGGGCCEE-----------------CCSTTST-
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEe--c--------cCCCeecccccc-----------------cccCCCC-
Confidence 45799999999999999999999999999999 3 246655432111 0001111
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEe----CCEEEE-cceeEEEEeCeEEEcCCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVD----KHRVKF-AGEERTVSAQNFIIAVGGRPTYPDI 268 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----~~~v~v-~g~~~~~~a~~vV~AtG~~p~~p~i 268 (296)
......+. ..+...+++.+++++..+....+ .+.+.+ ++ ..+.+|+||+|||+.|..|++
T Consensus 66 --~~~~~~~~-----------~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~d~lvlAtG~~~~~~~i 130 (323)
T 3f8d_A 66 --EIQASDMI-----------KVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRK--GEFKADSVILGIGVKRRKLGV 130 (323)
T ss_dssp --TEEHHHHH-----------HHHHHHHHTTTCCEEESCEEEEEEC--CEEEEESSS--CEEEEEEEEECCCCEECCCCC
T ss_pred --CCCHHHHH-----------HHHHHHHHHcCCEEEEEEEEEEEecCCEEEEEECCC--CEEEcCEEEECcCCCCccCCC
Confidence 11122222 22334455568888665543322 223444 44 578999999999999999999
Q ss_pred CCCccceeec-------ccCCCCCCcEEEeecc
Q psy7665 269 PGARLLRTLS-------LLSGVDPPTLIFLEHI 294 (296)
Q Consensus 269 ~G~~~~~~~s-------~~~~~~~~~~~~~~~~ 294 (296)
||.+.+.... ......++++++++.+
T Consensus 131 ~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G 163 (323)
T 3f8d_A 131 PGEQEFAGRGISYCSVADAPLFKNRVVAVIGGG 163 (323)
T ss_dssp TTTTTTBTTTEESCHHHHGGGGTTCEEEEECCS
T ss_pred CchhhhcCCceEEeccCCHhHcCCCEEEEECCC
Confidence 9987532211 1123345667777643
No 48
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.46 E-value=3.8e-13 Score=118.52 Aligned_cols=140 Identities=22% Similarity=0.231 Sum_probs=88.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+++|.+|++.|++|+|+| +. ..||.|....... ...+++.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie--~~-------~~gg~~~~~~~~~-----------------~~~~~~~ 66 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFE--GT-------SFGGALMTTTDVE-----------------NYPGFRN 66 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEC--CS-------SCSCGGGSCSCBC-----------------CSTTCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEe--cC-------CCCCceeccchhh-----------------hcCCCCC
Confidence 45799999999999999999999999999999 32 5677664331110 0011110
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEe---CCEE-EE-cceeEEEEeCeEEEcCCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVD---KHRV-KF-AGEERTVSAQNFIIAVGGRPTYPDI 268 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---~~~v-~v-~g~~~~~~a~~vV~AtG~~p~~p~i 268 (296)
.+....+..+ +...+++.+++++.++....+ .+.+ .+ ++ ..+.||+||+|||++|..|++
T Consensus 67 --~~~~~~~~~~-----------l~~~~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g--~~~~~d~lviAtG~~~~~~~i 131 (335)
T 2a87_A 67 --GITGPELMDE-----------MREQALRFGADLRMEDVESVSLHGPLKSVVTADG--QTHRARAVILAMGAAARYLQV 131 (335)
T ss_dssp --CBCHHHHHHH-----------HHHHHHHTTCEEECCCEEEEECSSSSEEEEETTS--CEEEEEEEEECCCEEECCCCC
T ss_pred --CCCHHHHHHH-----------HHHHHHHcCCEEEEeeEEEEEeCCcEEEEEeCCC--CEEEeCEEEECCCCCccCCCC
Confidence 1223333222 233345568888877643332 2456 55 44 578999999999999999999
Q ss_pred CCCccce---eec----ccCCCCCCcEEEeecc
Q psy7665 269 PGARLLR---TLS----LLSGVDPPTLIFLEHI 294 (296)
Q Consensus 269 ~G~~~~~---~~s----~~~~~~~~~~~~~~~~ 294 (296)
||.+.+. +.+ ......+++++|++.+
T Consensus 132 ~g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G 164 (335)
T 2a87_A 132 PGEQELLGRGVSSCATCDGFFFRDQDIAVIGGG 164 (335)
T ss_dssp THHHHTBTTTEESCHHHHGGGGTTCEEEEECSS
T ss_pred CchHhccCCceEEeeccchhhcCCCEEEEECCC
Confidence 9976432 111 1112346777777653
No 49
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.46 E-value=3.6e-13 Score=119.09 Aligned_cols=151 Identities=18% Similarity=0.175 Sum_probs=88.6
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMK 194 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (296)
.+||+|||||++|+++|.+|+++|++|+|+| +.+ .+||.|.+. +|...+.... ......++...
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie--~~~------~~gg~~~~~--~~~~~~~~~~------~~~~~~~~~~~ 66 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILD--AEA------SPGGAWQHA--WHSLHLFSPA------GWSSIPGWPMP 66 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEEC--CSS------SSSGGGGGS--CTTCBCSSCG------GGSCCSSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEE--CCC------CCCCcccCC--CCCcEecCch------hhhhCCCCCCC
Confidence 4799999999999999999999999999999 666 778887542 2211000000 00011111111
Q ss_pred c----cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcc-eEEE--EeCCEEE-E--cceeEEEEeCeEEEcCCC--C
Q psy7665 195 K----SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNA-KAVF--VDKHRVK-F--AGEERTVSAQNFIIAVGG--R 262 (296)
Q Consensus 195 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~--~~~~~v~-v--~g~~~~~~a~~vV~AtG~--~ 262 (296)
. ......+..+ +...+++.+++++.+ ++.. .....+. + ++ ..+.||+||+|||. +
T Consensus 67 ~~~~~~~~~~~~~~~-----------l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~--g~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 67 ASQGPYPARAEVLAY-----------LAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDG--RQWLARAVISATGTWGE 133 (357)
T ss_dssp CCSSSSCBHHHHHHH-----------HHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTS--CEEEEEEEEECCCSGGG
T ss_pred CCccCCCCHHHHHHH-----------HHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCC--CEEEeCEEEECCCCCCC
Confidence 1 2222233322 334445568888665 3222 2344444 4 44 37899999999995 7
Q ss_pred CCCCCCCCCccce---eec-ccC---CCCCCcEEEeecc
Q psy7665 263 PTYPDIPGARLLR---TLS-LLS---GVDPPTLIFLEHI 294 (296)
Q Consensus 263 p~~p~i~G~~~~~---~~s-~~~---~~~~~~~~~~~~~ 294 (296)
|..|++||.+++. .++ .+. ....+++++++.+
T Consensus 134 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G 172 (357)
T 4a9w_A 134 AYTPEYQGLESFAGIQLHSAHYSTPAPFAGMRVAIIGGG 172 (357)
T ss_dssp BCCCCCTTGGGCCSEEEEGGGCCCSGGGTTSEEEEECCS
T ss_pred CCCCCCCCccccCCcEEEeccCCChhhcCCCEEEEECCC
Confidence 7789999987542 222 111 1234567777653
No 50
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.46 E-value=8.1e-13 Score=115.52 Aligned_cols=118 Identities=21% Similarity=0.282 Sum_probs=78.7
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+++|.+|++.|++|+|+| + . ..||.|.+...+.. ..++.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie--~-~------~~gg~~~~~~~~~~-----------------~~~~~- 67 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILD--K-A------VAGGLTAEAPLVEN-----------------YLGFK- 67 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEE--S-S------STTGGGGGCSCBCC-----------------BTTBS-
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEe--C-C------CCCccccccchhhh-----------------cCCCc-
Confidence 45799999999999999999999999999999 4 3 56777654432210 01110
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEE--eCC--EEEEcceeEEEEeCeEEEcCCCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFV--DKH--RVKFAGEERTVSAQNFIIAVGGRPTYPDIP 269 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~--~v~v~g~~~~~~a~~vV~AtG~~p~~p~i~ 269 (296)
.+....+.. .+...+++.+++++.++.... ... .+.+++ ..+.+|+||+|+|++|..|++|
T Consensus 68 --~~~~~~~~~-----------~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~--~~~~~~~li~AtG~~~~~~~i~ 132 (319)
T 3cty_A 68 --SIVGSELAK-----------LFADHAANYAKIREGVEVRSIKKTQGGFDIETND--DTYHAKYVIITTGTTHKHLGVK 132 (319)
T ss_dssp --SBCHHHHHH-----------HHHHHHHTTSEEEETCCEEEEEEETTEEEEEESS--SEEEEEEEEECCCEEECCCCCB
T ss_pred --ccCHHHHHH-----------HHHHHHHHcCCEEEEeeEEEEEEeCCEEEEEECC--CEEEeCEEEECCCCCcccCCCC
Confidence 122222222 233445566888877554332 233 343344 4689999999999999999999
Q ss_pred CCcc
Q psy7665 270 GARL 273 (296)
Q Consensus 270 G~~~ 273 (296)
|.++
T Consensus 133 g~~~ 136 (319)
T 3cty_A 133 GESE 136 (319)
T ss_dssp TTTT
T ss_pred ChHH
Confidence 8764
No 51
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.46 E-value=6e-13 Score=124.40 Aligned_cols=138 Identities=19% Similarity=0.293 Sum_probs=89.6
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+||||||+|+++|.+|+++|++|+|+| + ..||.|.....++. ..+++
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie--~--------~~GG~~~~~~~~~~-----------------~~~~~- 262 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMG--E--------RFGGQVLDTVDIEN-----------------YISVP- 262 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--S--------STTGGGTTCSCBCC-----------------BTTBS-
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEE--C--------CCCCcccccccccc-----------------cCCCC-
Confidence 46899999999999999999999999999999 2 46777654322210 01111
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcc-eEEEEe-------CCEEEE-cceeEEEEeCeEEEcCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNA-KAVFVD-------KHRVKF-AGEERTVSAQNFIIAVGGRPT 264 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~-------~~~v~v-~g~~~~~~a~~vV~AtG~~p~ 264 (296)
......+. ..+...+.+.+++++.+ ++...+ .+.+++ +| ..+.||+||+|||++|.
T Consensus 263 --~~~~~~l~-----------~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g--~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 263 --KTEGQKLA-----------GALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASG--AVLKARSIIIATGAKWR 327 (521)
T ss_dssp --SBCHHHHH-----------HHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTS--CEEEEEEEEECCCEEEC
T ss_pred --CCCHHHHH-----------HHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCC--CEEEcCEEEECCCCCcC
Confidence 12222222 22334456679999877 444432 234555 45 57899999999999999
Q ss_pred CCCCCCCccceeeccc-------CCCCCCcEEEeecc
Q psy7665 265 YPDIPGARLLRTLSLL-------SGVDPPTLIFLEHI 294 (296)
Q Consensus 265 ~p~i~G~~~~~~~s~~-------~~~~~~~~~~~~~~ 294 (296)
.|++||.+++.....+ ....++++++++++
T Consensus 328 ~~~ipG~~~~~~~~v~~~~~~~~~~~~~k~V~ViGgG 364 (521)
T 1hyu_A 328 NMNVPGEDQYRTKGVTYCPHCDGPLFKGKRVAVIGGG 364 (521)
T ss_dssp CCCCTTTTTTTTTTEECCTTCCGGGGBTSEEEEECCS
T ss_pred CCCCCChhhhcCceEEEeecCchhhcCCCeEEEECCC
Confidence 9999998754222111 11235667777653
No 52
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.42 E-value=2.6e-13 Score=122.70 Aligned_cols=142 Identities=20% Similarity=0.274 Sum_probs=82.2
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCccccc--CCee--eccCCCchhHHHH----------hhhhH
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGL--GGTC--VNVGCIPKKLFHR----------ASLLN 180 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~--GG~~--~~~~~~p~~~~~~----------~~~~~ 180 (296)
.+||+|||||++|+++|+.|+++|.+|+|+| +.+.+|.++.. ||.| .+.++.|..++.. .....
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlE--k~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFD--NGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEe--CCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 4799999999999999999999999999999 66666666543 5666 4555554432110 00111
Q ss_pred HHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEE--EE-e----CCEEEE--cceeEEEE
Q psy7665 181 EEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAV--FV-D----KHRVKF--AGEERTVS 251 (296)
Q Consensus 181 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~-~----~~~v~v--~g~~~~~~ 251 (296)
....++..+|++.... ++..+... .....+...+...+++.|++++.++.. +. + ...+.+ ++ .++.
T Consensus 82 ~~~~~~~~~Gi~~~~~-~~g~~~p~--~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~--g~i~ 156 (401)
T 2gqf_A 82 DFISLVAEQGITYHEK-ELGQLFCD--EGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNS--TQWQ 156 (401)
T ss_dssp HHHHHHHHTTCCEEEC-STTEEEET--TCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETT--EEEE
T ss_pred HHHHHHHhCCCceEEC-cCCEEccC--CCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECC--CEEE
Confidence 1223333344432210 00000000 011222334455566679999876432 22 3 233444 44 3699
Q ss_pred eCeEEEcCCCCC
Q psy7665 252 AQNFIIAVGGRP 263 (296)
Q Consensus 252 a~~vV~AtG~~p 263 (296)
||+||+|||+.+
T Consensus 157 ad~VVlAtG~~s 168 (401)
T 2gqf_A 157 CKNLIVATGGLS 168 (401)
T ss_dssp ESEEEECCCCSS
T ss_pred CCEEEECCCCcc
Confidence 999999999877
No 53
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.42 E-value=1.6e-12 Score=114.28 Aligned_cols=142 Identities=21% Similarity=0.278 Sum_probs=85.2
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMK 194 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (296)
.+||+|||||++|+++|.+|++.|++|+||| +.+ .+||.|.+. +|+..+ ....+++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie--~~~------~~gg~~~~~--~~~~~~------------~~~~~~~-- 60 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVD--PLP------EPGGQLTAL--YPEKYI------------YDVAGFP-- 60 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEE--SSS------SSCHHHHHT--CTTSEE------------CCSTTCS--
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEe--CCC------CCCCeeecc--CCCcee------------eccCCCC--
Confidence 5799999999999999999999999999999 665 677876432 221100 0001111
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcc-eEEEE--eC--CEEEE-cceeEEEEeCeEEEcCCC---CCCC
Q psy7665 195 KSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNA-KAVFV--DK--HRVKF-AGEERTVSAQNFIIAVGG---RPTY 265 (296)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--~~--~~v~v-~g~~~~~~a~~vV~AtG~---~p~~ 265 (296)
......+.. .+...+...+++++.+ ++... .. +.+.+ ++ ..+.+|+||+|||+ .|..
T Consensus 61 -~~~~~~~~~-----------~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g--~~~~~~~lv~AtG~~~~~p~~ 126 (335)
T 2zbw_A 61 -KVYAKDLVK-----------GLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQG--NAYTAKAVIIAAGVGAFEPRR 126 (335)
T ss_dssp -SEEHHHHHH-----------HHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTS--CEEEEEEEEECCTTSEEEECC
T ss_pred -CCCHHHHHH-----------HHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCC--CEEEeCEEEECCCCCCCCCCC
Confidence 112222222 2233445557777543 33222 22 23444 34 56899999999998 5778
Q ss_pred CCCCCCcccee----ecccCC--CCCCcEEEeecc
Q psy7665 266 PDIPGARLLRT----LSLLSG--VDPPTLIFLEHI 294 (296)
Q Consensus 266 p~i~G~~~~~~----~s~~~~--~~~~~~~~~~~~ 294 (296)
|++||.+.+.. .++... ..++++++++.+
T Consensus 127 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~v~viG~G 161 (335)
T 2zbw_A 127 IGAPGEREFEGRGVYYAVKSKAEFQGKRVLIVGGG 161 (335)
T ss_dssp CCCTTTTTTBTTTEESSCSCGGGGTTCEEEEECSS
T ss_pred CCCCChhhccCcEEEEecCchhhcCCCEEEEECCC
Confidence 88998765432 222221 235667777653
No 54
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.42 E-value=6.7e-13 Score=115.93 Aligned_cols=140 Identities=17% Similarity=0.156 Sum_probs=87.1
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+++|.+|++.|++|+|+| +. ..||.|....... ...+++.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie--~~-------~~gg~~~~~~~~~-----------------~~~~~~~ 57 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLIT--GM-------EKGGQLTTTTEVE-----------------NWPGDPN 57 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEEC--CS-------STTGGGGGCSBCC-----------------CSTTCCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEc--cC-------CCCceEecchhhh-----------------hCCCCCC
Confidence 35799999999999999999999999999999 32 5677654321110 0111110
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEe--CCEEE-E-cceeEEEEeCeEEEcCCCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVD--KHRVK-F-AGEERTVSAQNFIIAVGGRPTYPDIP 269 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~v~-v-~g~~~~~~a~~vV~AtG~~p~~p~i~ 269 (296)
.+....+..+ +...+.+.+++++.++....+ ...++ . ++ ..+.+|+||+|||++|..|++|
T Consensus 58 --~~~~~~~~~~-----------~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~--~~~~~~~lv~AtG~~~~~~~~~ 122 (320)
T 1trb_A 58 --DLTGPLLMER-----------MHEHATKFETEIIFDHINKVDLQNRPFRLNGDN--GEYTCDALIIATGASARYLGLP 122 (320)
T ss_dssp --SCBHHHHHHH-----------HHHHHHHTTCEEECCCEEEEECSSSSEEEEESS--CEEEEEEEEECCCEEECCCCCH
T ss_pred --CCCHHHHHHH-----------HHHHHHHCCCEEEEeeeeEEEecCCEEEEEeCC--CEEEcCEEEECCCCCcCCCCCC
Confidence 1222222222 233445668998877654332 22233 3 44 5689999999999999999999
Q ss_pred CCccce---eec----ccCCCCCCcEEEeecc
Q psy7665 270 GARLLR---TLS----LLSGVDPPTLIFLEHI 294 (296)
Q Consensus 270 G~~~~~---~~s----~~~~~~~~~~~~~~~~ 294 (296)
|.+.+. +.+ ......+++++|++.+
T Consensus 123 g~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~G 154 (320)
T 1trb_A 123 SEEAFKGRGVSACATSDGFFYRNQKVAVIGGG 154 (320)
T ss_dssp HHHHTBTTTEESCHHHHGGGGTTSEEEEECSS
T ss_pred ChHHhCCceeEecccCCccccCCCeEEEECCC
Confidence 875432 111 1112346677777643
No 55
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.42 E-value=1.1e-12 Score=115.02 Aligned_cols=123 Identities=23% Similarity=0.314 Sum_probs=79.0
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+++|..|++.|++|+|+| +.+ .+||.|.+ ++|... .....+++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie--~~~------~~gG~~~~--~~~~~~------------~~~~~~~~- 62 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIE--SLP------QLGGQLSA--LYPEKY------------IYDVAGFP- 62 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSS------SSCHHHHH--HCTTSE------------ECCSTTCS-
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEE--cCC------CCCceehh--cCCCce------------EeccCCCC-
Confidence 34799999999999999999999999999999 666 67887632 111100 00011111
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcc-eEEEE--eC---CEEEEcceeEEEEeCeEEEcCCC---CCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNA-KAVFV--DK---HRVKFAGEERTVSAQNFIIAVGG---RPT 264 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--~~---~~v~v~g~~~~~~a~~vV~AtG~---~p~ 264 (296)
......+ ...+...+++.+++++.+ ++... .. +.+.+++ ..+.+|+||+|||+ .|.
T Consensus 63 --~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~--g~~~~d~vVlAtG~~~~~p~ 127 (332)
T 3lzw_A 63 --KIRAQEL-----------INNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNE--ETHYSKTVIITAGNGAFKPR 127 (332)
T ss_dssp --SEEHHHH-----------HHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESS--EEEEEEEEEECCTTSCCEEC
T ss_pred --CCCHHHH-----------HHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECC--CEEEeCEEEECCCCCcCCCC
Confidence 1122222 223344455568888753 33222 22 2455544 23899999999999 889
Q ss_pred CCCCCCCccc
Q psy7665 265 YPDIPGARLL 274 (296)
Q Consensus 265 ~p~i~G~~~~ 274 (296)
.|++||.+.+
T Consensus 128 ~~~~~g~~~~ 137 (332)
T 3lzw_A 128 KLELENAEQY 137 (332)
T ss_dssp CCCCTTGGGG
T ss_pred CCCCCChhhc
Confidence 9999998763
No 56
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.42 E-value=1e-12 Score=115.45 Aligned_cols=124 Identities=21% Similarity=0.273 Sum_probs=78.1
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+++|++|++.|++|+|+| +.. +.....||.|.....+. ...+++.
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie--~~~--~~~~~~gg~~~~~~~~~-----------------~~~~~~~ 65 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFE--GWM--ANDIAPGGQLTTTTDVE-----------------NFPGFPE 65 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEC--CSS--BTTBCTTCGGGGCSEEC-----------------CSTTCTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEe--ccC--ccccCCCceeeeccccc-----------------cCCCCcc
Confidence 35799999999999999999999999999999 410 00115667553321100 0011110
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEe--CC--EEEEcceeEEEEeCeEEEcCCCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVD--KH--RVKFAGEERTVSAQNFIIAVGGRPTYPDIP 269 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~--~v~v~g~~~~~~a~~vV~AtG~~p~~p~i~ 269 (296)
.+....+. ..+...+.+.+++++.++....+ .. .+++++ ..+.+|+||+|+|++|..|++|
T Consensus 66 --~~~~~~~~-----------~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~--~~~~~~~vv~A~G~~~~~~~~~ 130 (333)
T 1vdc_A 66 --GILGVELT-----------DKFRKQSERFGTTIFTETVTKVDFSSKPFKLFTDS--KAILADAVILAIGAVAKRLSFV 130 (333)
T ss_dssp --CEEHHHHH-----------HHHHHHHHHTTCEEECCCCCEEECSSSSEEEECSS--EEEEEEEEEECCCEEECCCCCB
T ss_pred --CCCHHHHH-----------HHHHHHHHHCCCEEEEeEEEEEEEcCCEEEEEECC--cEEEcCEEEECCCCCcCCCCCC
Confidence 11222222 22334455668998876543222 22 343345 6799999999999999999999
Q ss_pred CCcc
Q psy7665 270 GARL 273 (296)
Q Consensus 270 G~~~ 273 (296)
|.+.
T Consensus 131 g~~~ 134 (333)
T 1vdc_A 131 GSGE 134 (333)
T ss_dssp TCSS
T ss_pred Cccc
Confidence 9765
No 57
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.39 E-value=3.7e-12 Score=113.27 Aligned_cols=142 Identities=22% Similarity=0.243 Sum_probs=84.9
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMK 194 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (296)
.+||+|||||++|+++|.+|++.|++|+||| +.+ .+||.|.+. .|... .+...+++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie--~~~------~~gg~~~~~--~~~~~------------~~~~~~~~-- 69 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIE--SMP------QLGGQLAAL--YPEKH------------IYDVAGFP-- 69 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSS------SSCHHHHHT--CTTSE------------ECCSTTCS--
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEe--cCC------CCCCccccc--CCCcc------------cccCCCCC--
Confidence 5799999999999999999999999999999 655 677776432 11100 00001111
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcc-eEEEE--eC---CEEEE-cceeEEEEeCeEEEcCCC---CCC
Q psy7665 195 KSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNA-KAVFV--DK---HRVKF-AGEERTVSAQNFIIAVGG---RPT 264 (296)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--~~---~~v~v-~g~~~~~~a~~vV~AtG~---~p~ 264 (296)
......+.. .+...+...+++++.+ ++... .. +.+++ ++ ..+.||+||+|+|+ .|.
T Consensus 70 -~~~~~~~~~-----------~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g--~~~~~~~li~AtG~~~~~~~ 135 (360)
T 3ab1_A 70 -EVPAIDLVE-----------SLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTG--NVYRSRAVLIAAGLGAFEPR 135 (360)
T ss_dssp -SEEHHHHHH-----------HHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTS--CEEEEEEEEECCTTCSCCBC
T ss_pred -CCCHHHHHH-----------HHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCC--cEEEeeEEEEccCCCcCCCC
Confidence 112222222 2334455567887654 33222 11 24444 44 56899999999998 566
Q ss_pred CCCCCC-Ccccee----ecccCC--CCCCcEEEeecc
Q psy7665 265 YPDIPG-ARLLRT----LSLLSG--VDPPTLIFLEHI 294 (296)
Q Consensus 265 ~p~i~G-~~~~~~----~s~~~~--~~~~~~~~~~~~ 294 (296)
.|++|| .+++.. .++... ..+++++|++.+
T Consensus 136 ~~~i~g~~~~~~~~~v~~~~~~~~~~~~~~vvVvG~G 172 (360)
T 3ab1_A 136 KLPQLGNIDHLTGSSVYYAVKSVEDFKGKRVVIVGGG 172 (360)
T ss_dssp CCGGGCCCTTTBTTTEESSCSCGGGGTTCEEEEECSS
T ss_pred CCCCCCchhhCcCceEEEecCCHHHcCCCcEEEECCC
Confidence 777888 554322 222111 235667777653
No 58
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.37 E-value=2.8e-12 Score=117.64 Aligned_cols=136 Identities=22% Similarity=0.281 Sum_probs=80.0
Q ss_pred ccEEEECCChHHHHHHHHHHhC--CCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASM--NKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
+||+|||||++|+++|.+|++. |.+|+||| +.+ ..++.. ..+|... .+
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie--~~~------~~~~~~---~~~p~~~----------------~~--- 53 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLKPEWDVKVFE--ATE------WVSHAP---CGIPYVV----------------EG--- 53 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEEC--SSS------CCC----------------------------------
T ss_pred CcEEEECCcHHHHHHHHHHHHhCcCCCEEEEE--CCC------ccccCC---cCCcccc----------------CC---
Confidence 5999999999999999999998 78999999 444 222210 0011000 00
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHH-HHCCcEEEcc-eEEEEeCCEEEE--cceeEEEEeCeEEEcCCCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKEL-EKNKIDYFNA-KAVFVDKHRVKF--AGEERTVSAQNFIIAVGGRPTYPDIP 269 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~-~~~~~~~~~v~v--~g~~~~~~a~~vV~AtG~~p~~p~i~ 269 (296)
.... +.+.......+ ++.+++++.+ ++...+.....+ +++...+.+|+||+|||++|+.|++|
T Consensus 54 --~~~~-----------~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~~p~i~ 120 (449)
T 3kd9_A 54 --LSTP-----------DKLMYYPPEVFIKKRGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQVPAIE 120 (449)
T ss_dssp -------------------------CTHHHHTTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEECCCSCB
T ss_pred --CCCH-----------HHhhhcCHHHHHHhcCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCCCCCCC
Confidence 0000 00111111222 4568999887 444455444444 44345789999999999999999999
Q ss_pred CCcc-ceeec--c---------cCCCCCCcEEEeecc
Q psy7665 270 GARL-LRTLS--L---------LSGVDPPTLIFLEHI 294 (296)
Q Consensus 270 G~~~-~~~~s--~---------~~~~~~~~~~~~~~~ 294 (296)
|.+. .+.+. . .....+++++|++++
T Consensus 121 G~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG 157 (449)
T 3kd9_A 121 GVNLKGVFTADLPPDALAIREYMEKYKVENVVIIGGG 157 (449)
T ss_dssp TTTSTTEECSCSTHHHHHHHHHHSSSCCCEEEEECCS
T ss_pred CCCCCCEEEeCCHHHHHHHHHHHHhcCCCeEEEECCC
Confidence 9863 23322 0 111145678887654
No 59
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.33 E-value=7.4e-12 Score=114.96 Aligned_cols=137 Identities=18% Similarity=0.201 Sum_probs=81.9
Q ss_pred ccEEEECCChHHHHHHHHHHhC--CCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASM--NKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
+||+|||||++|+++|.+|+++ |.+|+||| +.+ .+|. .|......... .
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie--~~~------~~g~-------~~~~~~~~~~~---~----------- 53 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLID--KQA------TVGY-------LSGGLSAYFNH---T----------- 53 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEEC--SSS------CCSS-------CCC-----------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEE--CCC------CCcc-------cCccchhhhcC---C-----------
Confidence 4899999999999999999998 89999999 554 2221 11100000000 0
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcc-eEEEE--eCCEEEE--cceeEEEEeCeEEEcCCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNA-KAVFV--DKHRVKF--AGEERTVSAQNFIIAVGGRPTYPDI 268 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~--~~~~v~v--~g~~~~~~a~~vV~AtG~~p~~p~i 268 (296)
..+ .+.+.......+.+.+++++.+ ++... ....+.+ .+....+.+|++|+|||++|..|++
T Consensus 54 --~~~-----------~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p~i 120 (452)
T 3oc4_A 54 --INE-----------LHEARYITEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQI 120 (452)
T ss_dssp --------------------CCCCHHHHHHTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCCCC
T ss_pred --CCC-----------HHHhhcCCHHHHHHCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccCCCCC
Confidence 000 0000011123345668888654 33333 2345555 3334679999999999999999999
Q ss_pred CCCc-cceeecc--c-------CCCCCCcEEEeecc
Q psy7665 269 PGAR-LLRTLSL--L-------SGVDPPTLIFLEHI 294 (296)
Q Consensus 269 ~G~~-~~~~~s~--~-------~~~~~~~~~~~~~~ 294 (296)
||.+ ..++++. . ....++++++++.+
T Consensus 121 ~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG 156 (452)
T 3oc4_A 121 RGSQTEKLLKYKFLSGALAAVPLLENSQTVAVIGAG 156 (452)
T ss_dssp BTTTCTTEEEGGGCC----CCHHHHTCSEEEEECCS
T ss_pred CCCCCCCEEEeCCHHHHHHHHHHHhcCCEEEEECCC
Confidence 9987 3344431 1 12356778887654
No 60
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.33 E-value=3.4e-12 Score=122.79 Aligned_cols=126 Identities=22% Similarity=0.279 Sum_probs=84.5
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+++|..|++.|++|+|+| +.+ .+||++....++|.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie--~~~------~~gg~~~~~~~~~~----------------------- 420 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFD--AHS------EIGGQFNIAKQIPG----------------------- 420 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEE--SSS------SSCTTHHHHTTSTT-----------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEe--CCC------CCCCeeeccccCCC-----------------------
Confidence 45799999999999999999999999999999 666 67887654444332
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEEcceeEEE-EeCeEEEcCCCCCCCCCCCCCc
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTV-SAQNFIIAVGGRPTYPDIPGAR 272 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v~g~~~~~-~a~~vV~AtG~~p~~p~i~G~~ 272 (296)
...+..... .+...+++.+++++.++. +. . ..+ .+|+||+|||++|+.|++||.+
T Consensus 421 --~~~~~~~~~-----------~~~~~~~~~gv~~~~~~~-------v~--~--~~~~~~d~lviAtG~~p~~~~i~G~~ 476 (671)
T 1ps9_A 421 --KEEFYETLR-----------YYRRMIEVTGVTLKLNHT-------VT--A--DQLQAFDETILASGIVPRTPPIDGID 476 (671)
T ss_dssp --CTTHHHHHH-----------HHHHHHHHHTCEEEESCC-------CC--S--SSSCCSSEEEECCCEEECCCCCBTTT
T ss_pred --HHHHHHHHH-----------HHHHHHHHcCCEEEeCcE-------ec--H--HHhhcCCEEEEccCCCcCCCCCCCCC
Confidence 111111111 123344556888876542 11 1 123 7999999999999999999986
Q ss_pred c-ceeec--ccC--CCCCCcEEEeecc
Q psy7665 273 L-LRTLS--LLS--GVDPPTLIFLEHI 294 (296)
Q Consensus 273 ~-~~~~s--~~~--~~~~~~~~~~~~~ 294 (296)
. .+++. .+. ...+++++||+++
T Consensus 477 ~~~v~~~~~~l~~~~~~~~~VvVIGgG 503 (671)
T 1ps9_A 477 HPKVLSYLDVLRDKAPVGNKVAIIGCG 503 (671)
T ss_dssp STTEEEHHHHHTSCCCCCSEEEEECCH
T ss_pred CCcEeeHHHHhhCCCCCCCeEEEECCC
Confidence 4 34443 222 2345678887653
No 61
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.33 E-value=1.4e-12 Score=117.17 Aligned_cols=136 Identities=15% Similarity=0.168 Sum_probs=83.2
Q ss_pred cccEEEECCChHHHHHHHHHHhCC--CcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMN--KKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFH 192 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G--~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~ 192 (296)
.+||+|||||++|+++|.+|++.| .+|+++| +.. | |.+++..... .+.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie--~~~--------g-------~~~~~~~l~~-------------~~~ 53 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMIT--ADD--------G-------RSYSKPMLST-------------GFS 53 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEEC--SSC--------C-------CEECGGGGGG-------------TTT
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEE--CCC--------C-------CccCcccccH-------------HHh
Confidence 479999999999999999999999 4689999 322 2 2221110000 000
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcce-EEEEe--CCEEEEcceeEEEEeCeEEEcCCCCCCCCCCC
Q psy7665 193 MKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK-AVFVD--KHRVKFAGEERTVSAQNFIIAVGGRPTYPDIP 269 (296)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~v~v~g~~~~~~a~~vV~AtG~~p~~p~i~ 269 (296)
. ......+. ...+...+++.+++++.+. +...+ .+.+.+++ ..+.+|+||+|||++|..|++|
T Consensus 54 ~--~~~~~~~~----------~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~v~~~~--~~~~~d~lviAtG~~p~~p~i~ 119 (384)
T 2v3a_A 54 K--NKDADGLA----------MAEPGAMAEQLNARILTHTRVTGIDPGHQRIWIGE--EEVRYRDLVLAWGAEPIRVPVE 119 (384)
T ss_dssp T--TCCHHHHE----------EECHHHHHHHTTCEEECSCCCCEEEGGGTEEEETT--EEEECSEEEECCCEEECCCCCB
T ss_pred C--CCCHHHhh----------ccCHHHHHHhCCcEEEeCCEEEEEECCCCEEEECC--cEEECCEEEEeCCCCcCCCCCC
Confidence 0 00111110 0011233456689987643 33333 46777765 4699999999999999999999
Q ss_pred CCc-cceeecc--c-------CCCCCCcEEEeecc
Q psy7665 270 GAR-LLRTLSL--L-------SGVDPPTLIFLEHI 294 (296)
Q Consensus 270 G~~-~~~~~s~--~-------~~~~~~~~~~~~~~ 294 (296)
|.+ ..++++. + ....++++++++.+
T Consensus 120 g~~~~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG 154 (384)
T 2v3a_A 120 GDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAG 154 (384)
T ss_dssp STTTTCEEECSSHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CcCcCCEEEECCHHHHHHHHHhhccCCeEEEECCC
Confidence 976 4455431 1 12347888888654
No 62
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.31 E-value=3.4e-12 Score=114.84 Aligned_cols=135 Identities=18% Similarity=0.180 Sum_probs=82.3
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
...+|+|||||+||++||..|+..+.+|+||| +.+ ..+. ..+.-++. +. +
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie--~~~------~~~y----~~~~l~~~----------l~-----g--- 57 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMIN--SEK------YLPY----YRPRLNEI----------IA-----K--- 57 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEEC--SSS------SCCB----CGGGHHHH----------HH-----S---
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEE--CCC------CCCc----ccChhhHH----------Hc-----C---
Confidence 34589999999999999999988899999999 444 2221 00000000 00 0
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcc-eEEEEe--CCEEEE-cceeEEEEeCeEEEcCCCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNA-KAVFVD--KHRVKF-AGEERTVSAQNFIIAVGGRPTYPDIP 269 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~--~~~v~v-~g~~~~~~a~~vV~AtG~~p~~p~i~ 269 (296)
..+. +++.......+++.+++++.+ ++..++ .+.|++ ++ .++.||+||+|||++|+.|++|
T Consensus 58 --~~~~-----------~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g--~~~~yd~lvlAtG~~p~~p~i~ 122 (385)
T 3klj_A 58 --NKSI-----------DDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSG--EKIKYEKLIIASGSIANKIKVP 122 (385)
T ss_dssp --CCCG-----------GGTBSSCHHHHHHTTCEEECSCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCCCT
T ss_pred --CCCH-----------HHccCCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCC--CEEECCEEEEecCCCcCCCCCC
Confidence 0000 000111223345669999876 344333 456777 55 5789999999999999999999
Q ss_pred CCccceeec--c---cCC----CCCCcEEEeecc
Q psy7665 270 GARLLRTLS--L---LSG----VDPPTLIFLEHI 294 (296)
Q Consensus 270 G~~~~~~~s--~---~~~----~~~~~~~~~~~~ 294 (296)
|.+ .+.+. . ... ..++++++++.+
T Consensus 123 G~~-~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG 155 (385)
T 3klj_A 123 HAD-EIFSLYSYDDALKIKDECKNKGKAFIIGGG 155 (385)
T ss_dssp TCS-CEECCSSHHHHHHHHHHHHHHSCEEEECCS
T ss_pred CCC-CeEEeCCHHHHHHHHHHhhcCCeEEEECCC
Confidence 986 33332 1 111 125677777654
No 63
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.30 E-value=1.2e-11 Score=112.40 Aligned_cols=143 Identities=16% Similarity=0.269 Sum_probs=78.0
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCccccc--CCeeec--cCCCchhH----------HHHhhhh
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGL--GGTCVN--VGCIPKKL----------FHRASLL 179 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~--GG~~~~--~~~~p~~~----------~~~~~~~ 179 (296)
..+||+|||||++|+++|+.|+++|.+|+|+| +.+.+|.++.+ ||.|.. ..+.+..+ .......
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llE--k~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVID--HARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRP 103 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEe--CCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCH
Confidence 45799999999999999999999999999999 77766665533 445532 22222211 0011111
Q ss_pred HHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceE-EE--EeCCEEEE--cceeEEEEeCe
Q psy7665 180 NEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKA-VF--VDKHRVKF--AGEERTVSAQN 254 (296)
Q Consensus 180 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~--~~~~~v~v--~g~~~~~~a~~ 254 (296)
.....++...|+..........+. ......+...+...+++.|++++.++. .. .++..+.+ ++ ..+.||.
T Consensus 104 ~~~~~~~~~~Gi~~~~~~~g~~~~---~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~--g~i~ad~ 178 (417)
T 3v76_A 104 QDFVALVERHGIGWHEKTLGQLFC---DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSA--GTVDAAS 178 (417)
T ss_dssp HHHHHHHHHTTCCEEECSTTEEEE---SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETT--EEEEESE
T ss_pred HHHHHHHHHcCCCcEEeeCCEEee---CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECC--cEEEeeE
Confidence 122222222333221100000000 001122333445556666999987532 21 23344444 44 3799999
Q ss_pred EEEcCCCCC
Q psy7665 255 FIIAVGGRP 263 (296)
Q Consensus 255 vV~AtG~~p 263 (296)
||+|+|..+
T Consensus 179 VIlAtG~~S 187 (417)
T 3v76_A 179 LVVASGGKS 187 (417)
T ss_dssp EEECCCCSS
T ss_pred EEECCCCcc
Confidence 999999876
No 64
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.29 E-value=4.1e-12 Score=116.64 Aligned_cols=108 Identities=21% Similarity=0.282 Sum_probs=72.1
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+||||||+|+++|.+|++.|++|+||| +.+ .+||.+.+ +++.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e--~~~------~~GG~l~~-------------------------gip~ 167 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYD--RYD------RMGGLLVY-------------------------GIPG 167 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEC--SSS------SCSTHHHH-------------------------TSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEe--ccC------CCCCeeee-------------------------cCCC
Confidence 46799999999999999999999999999999 666 67775321 1110
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEEcceeEEEEeCeEEEcCCCC-CCCCCCCCCc
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGR-PTYPDIPGAR 272 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v~g~~~~~~a~~vV~AtG~~-p~~p~i~G~~ 272 (296)
. ... ..+ .......+++.|++++.++.. ...+++++ ..+.+|+||+|||+. |+.+++||.+
T Consensus 168 ~-~~~-~~~-----------~~~~~~~l~~~gv~~~~~~~v---~~~v~~~~--~~~~~d~vvlAtG~~~~~~~~ipG~~ 229 (456)
T 2vdc_G 168 F-KLE-KSV-----------VERRVKLLADAGVIYHPNFEV---GRDASLPE--LRRKHVAVLVATGVYKARDIKAPGSG 229 (456)
T ss_dssp T-TSC-HHH-----------HHHHHHHHHHTTCEEETTCCB---TTTBCHHH--HHSSCSEEEECCCCCEECCTTCSCCT
T ss_pred c-cCC-HHH-----------HHHHHHHHHHCCcEEEeCCEe---ccEEEhhH--hHhhCCEEEEecCCCCCCCCCCCCCc
Confidence 0 111 111 112234456779998876531 12233322 125699999999995 7778899976
No 65
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.26 E-value=4.4e-12 Score=116.31 Aligned_cols=137 Identities=18% Similarity=0.281 Sum_probs=83.0
Q ss_pred ccEEEECCChHHHHHHHHHHhC--CCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASM--NKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
+||+|||||++|+.+|.+|++. |.+|+|+| +.+ ..|. ..| ...... . +.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie--~~~------~~~~----~~~---~~~~~~-------~-----~~-- 51 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYE--KGD------FISF----LSA---GMQLYL-------E-----GK-- 51 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEE--SSS------SSSB----CGG---GHHHHH-------T-----TS--
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEE--CCC------ccCc----ccc---cchhhh-------c-----Cc--
Confidence 3899999999999999999998 99999999 443 2221 111 100000 0 00
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEE-EE--eCCEEEE-c---ceeEEEEeCeEEEcCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAV-FV--DKHRVKF-A---GEERTVSAQNFIIAVGGRPTYP 266 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~--~~~~v~v-~---g~~~~~~a~~vV~AtG~~p~~p 266 (296)
..++..+ ...+...+++.+++++.+... .. +.+.+.+ + |+..++.||+||+|||++|..|
T Consensus 52 --~~~~~~~-----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 118 (447)
T 1nhp_A 52 --VKDVNSV-----------RYMTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFEL 118 (447)
T ss_dssp --SCCGGGS-----------BSCCHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred --cCCHHHh-----------hcCCHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCCC
Confidence 0000000 001122345568998665443 23 3456766 3 4334689999999999999999
Q ss_pred CCCCCc-cceeecc--c-------CCC--CCCcEEEeecc
Q psy7665 267 DIPGAR-LLRTLSL--L-------SGV--DPPTLIFLEHI 294 (296)
Q Consensus 267 ~i~G~~-~~~~~s~--~-------~~~--~~~~~~~~~~~ 294 (296)
++||.+ +.++++. . ... .+++++|++.+
T Consensus 119 ~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G 158 (447)
T 1nhp_A 119 DIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSG 158 (447)
T ss_dssp CSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCS
T ss_pred CCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCC
Confidence 999986 3344431 0 012 67888888754
No 66
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.25 E-value=1.3e-11 Score=114.51 Aligned_cols=117 Identities=20% Similarity=0.302 Sum_probs=73.0
Q ss_pred ccccEEEECCChHHHHHHHHHHhCC---CcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMN---KKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFG 190 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G---~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g 190 (296)
+.+||+|||||++|+.+|.+|++.| .+|+||| +.+ .++. .+| ..... ... .
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie--~~~------~~~~----~~~---~~~~~-------~~~----~ 87 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFD--QNS------NISF----LGA---GMALW-------IGE----Q 87 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEEC--SSS------CCSB----CGG---GHHHH-------HTT----S
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEE--CCC------CCCc----ccc---ccchh-------hcC----c
Confidence 4589999999999999999999988 9999999 443 2221 111 00000 000 0
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcce-EEEEe--CCEEEEc--ceeEEEEeCeEEEcCCCCCCC
Q psy7665 191 FHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK-AVFVD--KHRVKFA--GEERTVSAQNFIIAVGGRPTY 265 (296)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~v~v~--g~~~~~~a~~vV~AtG~~p~~ 265 (296)
+. +...+ .......+++.+++++.+. +..++ ...+.+. +...++.||+||+|||++|..
T Consensus 88 ~~-----~~~~~-----------~~~~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~ 151 (490)
T 2bc0_A 88 IA-----GPEGL-----------FYSDKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPIL 151 (490)
T ss_dssp SS-----CSGGG-----------BSCCHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECC
T ss_pred cC-----CHHHh-----------hhcCHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCC
Confidence 00 00000 0001223445689986654 34333 4566663 333679999999999999999
Q ss_pred CCCCCCc
Q psy7665 266 PDIPGAR 272 (296)
Q Consensus 266 p~i~G~~ 272 (296)
|++||.+
T Consensus 152 p~i~G~~ 158 (490)
T 2bc0_A 152 PPIKGAE 158 (490)
T ss_dssp CSCBTCC
T ss_pred CCCCCcc
Confidence 9999976
No 67
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.25 E-value=3.2e-11 Score=111.27 Aligned_cols=143 Identities=22% Similarity=0.263 Sum_probs=74.8
Q ss_pred ccEEEECCChHHHHHHHHHHhC--CCcEEEEeccCCCCCCcccccCCeeeccCC-CchhHHHHhhhhHHHhhcccccCcc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASM--NKKVALFDFVTPSQHGTVWGLGGTCVNVGC-IPKKLFHRASLLNEEATTSDNFGFH 192 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~g~~ 192 (296)
+||+|||||++|+++|.+|+++ |.+|+||| +.+ ..+. ..| +|... .+.
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie--~~~------~~~~----~~~gl~~~~----------------~g~- 54 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMID--QAS------RISY----GGCGIPYYV----------------SGE- 54 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEEC--CC--------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEE--CCC------cccc----cccccchhh----------------cCC-
Confidence 5899999999999999999998 89999999 444 2211 000 11000 000
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcce-EEEE--eCCEEEE-c---ceeEEEEeCeEEEcCCCCCCC
Q psy7665 193 MKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK-AVFV--DKHRVKF-A---GEERTVSAQNFIIAVGGRPTY 265 (296)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~~~v~v-~---g~~~~~~a~~vV~AtG~~p~~ 265 (296)
......+... ...+........+..+++++.+. +... ....+.+ + +....+.+|++|+|||++|..
T Consensus 55 ---~~~~~~~~~~----~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~ 127 (472)
T 3iwa_A 55 ---VSNIESLQAT----PYNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANR 127 (472)
T ss_dssp ---------------------------------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred ---CCchHHhccc----cchhccCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCC
Confidence 0000000000 00001111111223578876543 3333 3455665 3 544589999999999999999
Q ss_pred CCCCCCc-cceeec--c---------cCCCCCCcEEEeecc
Q psy7665 266 PDIPGAR-LLRTLS--L---------LSGVDPPTLIFLEHI 294 (296)
Q Consensus 266 p~i~G~~-~~~~~s--~---------~~~~~~~~~~~~~~~ 294 (296)
|++||.+ ..+.+. . .....+++++|++.+
T Consensus 128 p~i~G~~~~~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG 168 (472)
T 3iwa_A 128 PPVEGMDLAGVTPVTNLDEAEFVQHAISAGEVSKAVIVGGG 168 (472)
T ss_dssp CSCTTTTSBTEEECCSHHHHHHHHHHCCTTSCSEEEEECCS
T ss_pred CCCCCCCCCCEEEeCCHHHHHHHHHHhhcCCCCEEEEECCC
Confidence 9999985 333221 0 111347788887654
No 68
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.25 E-value=5.6e-11 Score=112.34 Aligned_cols=135 Identities=21% Similarity=0.257 Sum_probs=75.6
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcc-------
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTS------- 186 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~------- 186 (296)
..|||+|||||++|++||..|++.|.+|+|+| +... .+|. .+|.|+............+..+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIE--k~~~-----~iG~----~~Cnps~ggia~~~lv~ei~algg~~~~~ 95 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLT--HNID-----TLGQ----MSCNPAIGGIGKGHLVKEVDALGGLMAKA 95 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEE--SCGG-----GTTC----CSSSSEEESTTHHHHHHHHHHTTCSHHHH
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEe--eccc-----cccc----ccccccccchhhHHHHHHHHHhccHHHHH
Confidence 45899999999999999999999999999999 3310 1221 2333322110001111111000
Q ss_pred -cccCccccc--------------cCCHHHHHHHHHHHHHHHHHHHHHHHHH-CCcEEEcceEEEE--eCCE---EEE-c
Q psy7665 187 -DNFGFHMKK--------------SFTWKTLVDNVQKYIRNLNNNYEKELEK-NKIDYFNAKAVFV--DKHR---VKF-A 244 (296)
Q Consensus 187 -~~~g~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~--~~~~---v~v-~ 244 (296)
...++.+.. ..+.. .+...+...+++ .+++++.+++... ++.. |.+ +
T Consensus 96 ~d~~gi~f~~l~~~kgpav~~~r~~~Dr~-----------~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~d 164 (651)
T 3ces_A 96 IDQAGIQFRILNASKGPAVRATRAQADRV-----------LYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQM 164 (651)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHH-----------HHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETT
T ss_pred hhhcccchhhhhcccCcccccchhhCCHH-----------HHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECC
Confidence 000010000 11111 223334455666 5899877665443 3333 334 4
Q ss_pred ceeEEEEeCeEEEcCCCCCCCCCCCCCc
Q psy7665 245 GEERTVSAQNFIIAVGGRPTYPDIPGAR 272 (296)
Q Consensus 245 g~~~~~~a~~vV~AtG~~p~~p~i~G~~ 272 (296)
| ..+.||.||+|||+.+..+.++|..
T Consensus 165 G--~~I~Ad~VVLATGt~s~~~~i~G~~ 190 (651)
T 3ces_A 165 G--LKFRAKAVVLTVGTFLDGKIHIGLD 190 (651)
T ss_dssp S--EEEEEEEEEECCSTTTCCEEECC--
T ss_pred C--CEEECCEEEEcCCCCccCccccCcc
Confidence 5 6799999999999988877777764
No 69
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.24 E-value=1.4e-11 Score=113.04 Aligned_cols=139 Identities=17% Similarity=0.203 Sum_probs=83.2
Q ss_pred ccEEEECCChHHHHHHHHHHhC--CCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASM--NKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
+||+|||||++|+.+|.+|++. |.+|+|+| +.+ .++. .+........ ....
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie--~~~------~~~~-------~~~~~~~~~~------g~~~------ 53 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYE--MND------NISF-------LSCGIALYLG------KEIK------ 53 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEE--SSS------CCCB-------CGGGHHHHHT------TCBG------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEE--CCC------CCCc-------ccccchhhhc------CCcc------
Confidence 4899999999999999999998 99999999 443 2221 1111000000 0000
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcce-EEEE--eCCEEEE-c---ceeEEEEeCeEEEcCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK-AVFV--DKHRVKF-A---GEERTVSAQNFIIAVGGRPTYP 266 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~--~~~~v~v-~---g~~~~~~a~~vV~AtG~~p~~p 266 (296)
..++..+ ...+...+++.+++++.+. .... +.+.+.+ + ++...+.+|++|+|||++|+.|
T Consensus 54 --~~~~~~~-----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~p 120 (452)
T 2cdu_A 54 --NNDPRGL-----------FYSSPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTVP 120 (452)
T ss_dssp --GGCGGGG-----------BSCCHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred --cCCHHHh-----------hhcCHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCCC
Confidence 0001110 0011233455689986654 3333 2456766 2 2236799999999999999999
Q ss_pred CCCCCc-cceeecc---------cCCCCCCcEEEeecc
Q psy7665 267 DIPGAR-LLRTLSL---------LSGVDPPTLIFLEHI 294 (296)
Q Consensus 267 ~i~G~~-~~~~~s~---------~~~~~~~~~~~~~~~ 294 (296)
++||.+ ..++++. ...+.++++++++.+
T Consensus 121 ~i~g~~~~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG 158 (452)
T 2cdu_A 121 PIPGIDSSRVYLCKNYNDAKKLFEEAPKAKTITIIGSG 158 (452)
T ss_dssp CCTTTTSTTEEECSSHHHHHHHHHHGGGCSEEEEECCS
T ss_pred CCCCCCCCCEEEeCcHHHHHHHHHHhccCCeEEEECcC
Confidence 999986 3344321 112357778887654
No 70
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.24 E-value=3.1e-12 Score=117.01 Aligned_cols=137 Identities=13% Similarity=0.255 Sum_probs=80.6
Q ss_pred cEEEECCChHHHHHHHHHHhCC--CcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccc
Q psy7665 117 DLCVIGGGSGGISAAKEAASMN--KKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMK 194 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G--~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (296)
+|+||||||+|++||.+|++.| .+|+||| +.+ ..++ ...|+|... . .. .......+
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie--~~~------~~~~---~~~~l~~~~-~------~~-~~~~~~~~--- 59 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFE--KDR------DMSF---ANCALPYVI-G------EV-VEDRRYAL--- 59 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEE--SSS------CSSB---CGGGHHHHH-T------TS-SCCGGGTB---
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEe--CCC------CCCC---CcchhHHHH-c------CC-ccchhhhh---
Confidence 6999999999999999999988 4699999 433 2211 111222100 0 00 00000000
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcce-EEEEe--CCEEEE----cceeEEEEeCeEEEcCCCCCCCCC
Q psy7665 195 KSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK-AVFVD--KHRVKF----AGEERTVSAQNFIIAVGGRPTYPD 267 (296)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~v~v----~g~~~~~~a~~vV~AtG~~p~~p~ 267 (296)
.... ...+++.+++++.+. +..++ ...+.+ ++....+.||+||+|||++|+.|+
T Consensus 60 -~~~~------------------~~~~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~ 120 (437)
T 4eqs_A 60 -AYTP------------------EKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLG 120 (437)
T ss_dssp -CCCH------------------HHHHHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECCCC
T ss_pred -hcCH------------------HHHHHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcccccc
Confidence 0000 112234588886654 33333 334544 344467899999999999999999
Q ss_pred CCCCccceeecc---------cCCCCCCcEEEeecc
Q psy7665 268 IPGARLLRTLSL---------LSGVDPPTLIFLEHI 294 (296)
Q Consensus 268 i~G~~~~~~~s~---------~~~~~~~~~~~~~~~ 294 (296)
+||...+...+. .....++++++++++
T Consensus 121 i~g~~~~~~~~~~~~~~l~~~~~~~~~~~vvViGgG 156 (437)
T 4eqs_A 121 FESDITFTLRNLEDTDAIDQFIKANQVDKVLVVGAG 156 (437)
T ss_dssp CCCTTEECCSSHHHHHHHHHHHHHHTCCEEEEECCS
T ss_pred ccCceEEeeccHHHHHHHHHhhhccCCcEEEEECCc
Confidence 999765544331 223457788888764
No 71
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.24 E-value=5.7e-12 Score=121.62 Aligned_cols=126 Identities=19% Similarity=0.276 Sum_probs=81.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+++|++|+++|++|+||| +.+ .+||.|....++|.
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE--~~~------~~GG~~~~~~~~p~----------------------- 438 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAE--AGR------DLGGRVTQESALPG----------------------- 438 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC--SSS------SSCTHHHHHHTSTT-----------------------
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEe--cCC------CCCCEeeeccCCCc-----------------------
Confidence 45799999999999999999999999999999 666 78887654333331
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CcEEEcceEEEEeCCEEEE-cceeEEEEeCeEEEcCCCC--------C
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKN-KIDYFNAKAVFVDKHRVKF-AGEERTVSAQNFIIAVGGR--------P 263 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~v~v-~g~~~~~~a~~vV~AtG~~--------p 263 (296)
..++..+..+ +...+.+. +++++.++ .++. +. ..+.+|+||+|||+. |
T Consensus 439 --~~~~~~~~~~-----------~~~~~~~~~gv~~~~~~-------~v~~~~~--~~~~~d~lvlAtG~~~~~~~~~~~ 496 (690)
T 3k30_A 439 --LSAWGRVKEY-----------REAVLAELPNVEIYRES-------PMTGDDI--VEFGFEHVITATGATWRTDGVARF 496 (690)
T ss_dssp --CGGGGHHHHH-----------HHHHHHTCTTEEEESSC-------CCCHHHH--HHTTCCEEEECCCEEECSSCCSSS
T ss_pred --hhHHHHHHHH-----------HHHHHHHcCCCEEEECC-------eecHHHH--hhcCCCEEEEcCCCcccccccccc
Confidence 1112222222 22334444 78877643 2222 22 346799999999997 5
Q ss_pred CCCCCCCCcc-ceeec--ccCCC--CCCcEEEee
Q psy7665 264 TYPDIPGARL-LRTLS--LLSGV--DPPTLIFLE 292 (296)
Q Consensus 264 ~~p~i~G~~~-~~~~s--~~~~~--~~~~~~~~~ 292 (296)
..|++||.+. .+.++ .+... ..+++++++
T Consensus 497 ~~~~i~G~~~~~v~~~~~~l~~~~~~g~~VvViG 530 (690)
T 3k30_A 497 HTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYD 530 (690)
T ss_dssp CSSCCCBCTTSEEECHHHHHTTCCCSSSEEEEEE
T ss_pred CCCCCCCCCCCcEEcHHHHhCCCCCCCCEEEEEc
Confidence 5788999873 34443 22322 234477776
No 72
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.24 E-value=5.9e-12 Score=114.20 Aligned_cols=134 Identities=18% Similarity=0.266 Sum_probs=81.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCc--EEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKK--VALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~--V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
.+|+|||||++|+++|.+|+++|++ |+|+| +.+ ..+... ..++..++.. ....... +
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~--~~~------~~~y~~---~~l~~~~~~g-------~~~~~~~-~-- 61 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIG--DEP------HLPYDR---PSLSKAVLDG-------SLERPPI-L-- 61 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEE--CSS------SSSBCS---GGGGTHHHHT-------SSSSCCB-S--
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEE--CCC------CCCcCC---ccccHHHhCC-------CCCHHHh-c--
Confidence 4899999999999999999999987 99999 443 211100 0000000000 0000000 0
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcc-eEEEEe--CCEEEE-cceeEEEEeCeEEEcCCCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNA-KAVFVD--KHRVKF-AGEERTVSAQNFIIAVGGRPTYPDIP 269 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~--~~~v~v-~g~~~~~~a~~vV~AtG~~p~~p~i~ 269 (296)
.....+.+.+++++.+ ++..++ .+.+.+ ++ ..+.+|+||+|||++|+.|++|
T Consensus 62 ----------------------~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~p~~~~ip 117 (410)
T 3ef6_A 62 ----------------------AEADWYGEARIDMLTGPEVTALDVQTRTISLDDG--TTLSADAIVIATGSRARTMALP 117 (410)
T ss_dssp ----------------------SCTTHHHHTTCEEEESCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCCCT
T ss_pred ----------------------CCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCC--CEEECCEEEEccCCcccCCCCC
Confidence 0012234568999877 554444 356776 55 5789999999999999999999
Q ss_pred CCc-cceeec--c-------cCCCCCCcEEEeecc
Q psy7665 270 GAR-LLRTLS--L-------LSGVDPPTLIFLEHI 294 (296)
Q Consensus 270 G~~-~~~~~s--~-------~~~~~~~~~~~~~~~ 294 (296)
|.+ ..+.+. . .....++++++++++
T Consensus 118 G~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG 152 (410)
T 3ef6_A 118 GSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGG 152 (410)
T ss_dssp TTTSTTEECCCSHHHHHHHHHHCCTTCEEEEECCS
T ss_pred CccccceEEeccHHHHHHHHHHhccCCeEEEECCC
Confidence 976 333321 1 123456778887654
No 73
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.24 E-value=2.8e-11 Score=101.19 Aligned_cols=124 Identities=20% Similarity=0.195 Sum_probs=70.5
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMK 194 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (296)
.+||+|||||++|+++|..|++.|.+|+|+| +.. ..+| .+ |.|.............+.. ..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie--~~~-----~~~G-~~----~~~~~~~~~~~~~~~~~~d--~~----- 63 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLT--QSL-----DAVM-MP----FLPPKPPFPPGSLLERAYD--PK----- 63 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEE--SCG-----GGTT-CC----SSCCCSCCCTTCHHHHHCC--TT-----
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEe--cCC-----CcCC-cc----cCccccccchhhHHhhhcc--CC-----
Confidence 4799999999999999999999999999999 432 0233 21 2211000000000000000 00
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CcEEEcceEEE--EeCCE---EEE-cceeEEEEeCeEEEcCCCCCCCCC
Q psy7665 195 KSFTWKTLVDNVQKYIRNLNNNYEKELEKN-KIDYFNAKAVF--VDKHR---VKF-AGEERTVSAQNFIIAVGGRPTYPD 267 (296)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~--~~~~~---v~v-~g~~~~~~a~~vV~AtG~~p~~p~ 267 (296)
.. ....+...+.+.+++. +++++..+... .+... +.+ ++ .++.||+||+|+|..+....
T Consensus 64 -g~-----------~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g--~~i~a~~VV~A~G~~s~~~~ 129 (232)
T 2cul_A 64 -DE-----------RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEG--PPARGEKVVLAVGSFLGARL 129 (232)
T ss_dssp -CC-----------CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTS--CCEECSEEEECCTTCSSCEE
T ss_pred -CC-----------CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCC--CEEECCEEEECCCCChhhce
Confidence 00 0122334455666776 89887654432 23333 333 44 47899999999998665544
Q ss_pred CCCC
Q psy7665 268 IPGA 271 (296)
Q Consensus 268 i~G~ 271 (296)
++|.
T Consensus 130 ~~G~ 133 (232)
T 2cul_A 130 FLGG 133 (232)
T ss_dssp EETT
T ss_pred ecCC
Confidence 4444
No 74
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.24 E-value=4.9e-12 Score=113.03 Aligned_cols=133 Identities=18% Similarity=0.177 Sum_probs=78.7
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMK 194 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~ 194 (296)
+.||+|||||++|+++|.+|++.| +|+|+| +.+ ..+ +..+.... .+. +
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie--~~~------~~~----~~~~~l~~----------~~~-----g---- 55 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVID--KEP------VPY----YSKPMLSH----------YIA-----G---- 55 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEEC--SSS------SCC----CCSTTHHH----------HHT-----T----
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEE--CCC------CCc----cccchhHH----------HHh-----C----
Confidence 459999999999999999999999 999999 433 111 00010000 000 0
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcce-EEEEeC--CEEEEcceeEEEEeCeEEEcCCCCCCCCCCCCC
Q psy7665 195 KSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK-AVFVDK--HRVKFAGEERTVSAQNFIIAVGGRPTYPDIPGA 271 (296)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~--~~v~v~g~~~~~~a~~vV~AtG~~p~~p~i~G~ 271 (296)
..++..+..+ ....+++.+++++.++ +..++. +.|+.++ .++.||+||+|||++|+.|++||.
T Consensus 56 -~~~~~~~~~~-----------~~~~~~~~~v~~~~g~~v~~id~~~~~V~~~g--~~~~~d~lViATGs~p~~p~i~G~ 121 (367)
T 1xhc_A 56 -FIPRNRLFPY-----------SLDWYRKRGIEIRLAEEAKLIDRGRKVVITEK--GEVPYDTLVLATGARAREPQIKGK 121 (367)
T ss_dssp -SSCGGGGCSS-----------CHHHHHHHTEEEECSCCEEEEETTTTEEEESS--CEEECSEEEECCCEEECCCCSBTG
T ss_pred -CCCHHHhccC-----------CHHHHHhCCcEEEECCEEEEEECCCCEEEECC--cEEECCEEEECCCCCCCCCCCCCc
Confidence 0111111100 1122344589988774 454443 3454344 569999999999999999999994
Q ss_pred ccceeec--c---cCC----CCCCcEEEeecc
Q psy7665 272 RLLRTLS--L---LSG----VDPPTLIFLEHI 294 (296)
Q Consensus 272 ~~~~~~s--~---~~~----~~~~~~~~~~~~ 294 (296)
+.+.++ . ... +.+++++|++++
T Consensus 122 -~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG 152 (367)
T 1xhc_A 122 -EYLLTLRTIFDADRIKESIENSGEAIIIGGG 152 (367)
T ss_dssp -GGEECCCSHHHHHHHHHHHHHHSEEEEEECS
T ss_pred -CCEEEEcCHHHHHHHHHHhhcCCcEEEECCC
Confidence 444432 1 111 123678887654
No 75
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.23 E-value=1e-10 Score=103.99 Aligned_cols=136 Identities=15% Similarity=0.183 Sum_probs=72.7
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC-cEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK-KVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
.+||+|||||++|+++|.+|++.|+ +|+||| +. .+||.|.++..... . . ........+++..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie--~~-------~~Gg~~~~~~~~~~-~-~------~~~~~~~~~g~~~ 66 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILE--KG-------TVGHSFKHWPKSTR-T-I------TPSFTSNGFGMPD 66 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEC--SS-------STTHHHHTSCTTCB-C-S------SCCCCCGGGTCCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEe--cC-------CCCCccccCccccc-c-c------CcchhcccCCchh
Confidence 4799999999999999999999999 999999 33 36676654321100 0 0 0000011122210
Q ss_pred -cc-cCCHHHHHHHHHH--HHHHHHHHHHHHHHHCCcEEEcce-EEEEe----CCEEEEcceeEEEEeCeEEEcCCCCCC
Q psy7665 194 -KK-SFTWKTLVDNVQK--YIRNLNNNYEKELEKNKIDYFNAK-AVFVD----KHRVKFAGEERTVSAQNFIIAVGGRPT 264 (296)
Q Consensus 194 -~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~----~~~v~v~g~~~~~~a~~vV~AtG~~p~ 264 (296)
.. ..++......... ....+...+...+++.+++++.++ +...+ .+.|.+.+ ..+.||+||+|||+.+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~--g~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 67 MNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTT--ETYHADYIFVATGDYNF 144 (369)
T ss_dssp TTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESS--CCEEEEEEEECCCSTTS
T ss_pred hhhccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCC--CEEEeCEEEECCCCCCc
Confidence 00 0000000000000 001122223344556689887654 32222 23454443 25889999999999765
Q ss_pred CCCCCC
Q psy7665 265 YPDIPG 270 (296)
Q Consensus 265 ~p~i~G 270 (296)
|.+|+
T Consensus 145 -p~ip~ 149 (369)
T 3d1c_A 145 -PKKPF 149 (369)
T ss_dssp -BCCCS
T ss_pred -cCCCC
Confidence 66776
No 76
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.23 E-value=9.6e-12 Score=120.65 Aligned_cols=132 Identities=23% Similarity=0.285 Sum_probs=81.6
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|++||.+|+++|++|+||| +.+ .+||.|....++|..
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie--~~~------~~GG~~~~~~~~pg~---------------------- 437 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTD--TAE------KIGGHLNQVAALPGL---------------------- 437 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEEC--SSS------STTTTHHHHTTSTTC----------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEe--CCC------CcCCeeeecccCCCh----------------------
Confidence 45799999999999999999999999999999 666 678877655444421
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE-cceeEEEEeCeEEEcCCCC--------CC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF-AGEERTVSAQNFIIAVGGR--------PT 264 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v-~g~~~~~~a~~vV~AtG~~--------p~ 264 (296)
.++..+..++....+.+. .....++++..+ ..+++ ++ ..+.+|+||+|||+. |.
T Consensus 438 ---~~~~~~~~~~~~~i~~~~-----~~~~~~v~i~~~-------~~v~~~~~--~~~~~d~vviAtG~~~~~~~~~~p~ 500 (729)
T 1o94_A 438 ---GEWSYHRDYRETQITKLL-----KKNKESQLALGQ-------KPMTADDV--LQYGADKVIIATGARWNTDGTNCLT 500 (729)
T ss_dssp ---GGGHHHHHHHHHHHHHHH-----HHSTTCEEECSC-------CCCCHHHH--HTSCCSEEEECCCEEECSSCCCTTT
T ss_pred ---HHHHHHHHHHHHHHHHhh-----cccCCceEEEeC-------eEEehhhc--cccCCCEEEEcCCCCcccccccCcc
Confidence 112223333322222210 011224554332 22333 22 347899999999987 56
Q ss_pred CCCCCCCcc---ceeec--ccCCC--CCCcEEEee
Q psy7665 265 YPDIPGARL---LRTLS--LLSGV--DPPTLIFLE 292 (296)
Q Consensus 265 ~p~i~G~~~---~~~~s--~~~~~--~~~~~~~~~ 292 (296)
.|++||.++ .+++. ++... ..++++||+
T Consensus 501 ~~~ipG~~~~~~~v~~~~~~l~~~~~~gk~VvVIG 535 (729)
T 1o94_A 501 HDPIPGADASLPDQLTPEQVMDGKKKIGKRVVILN 535 (729)
T ss_dssp SSCCTTCCTTSTTEECHHHHHHCCSCCCSEEEEEE
T ss_pred CCCCCCccccCCCEEEHHHHhcCCCCCCCeEEEEc
Confidence 788999762 34443 22222 234688876
No 77
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.23 E-value=7.7e-12 Score=114.37 Aligned_cols=112 Identities=21% Similarity=0.402 Sum_probs=74.8
Q ss_pred ccEEEECCChHHHHHHHHHHh---CCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcc
Q psy7665 116 YDLCVIGGGSGGISAAKEAAS---MNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFH 192 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~---~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~ 192 (296)
.||+|||||++|+++|.+|++ .|.+|+||| +.+ ... +.|...... .+
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie--~~~------~~~-------~~~~~~~~~-------------~g-- 54 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLIS--AND------YFQ-------FVPSNPWVG-------------VG-- 54 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEEC--SSS------EEE-------CGGGHHHHH-------------HT--
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEe--CCC------CCc-------ccCCccccc-------------cC--
Confidence 489999999999999999999 899999999 443 100 011000000 00
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeC--CEEEE-cceeEEEEeCeEEEcCCCCCCCCCCC
Q psy7665 193 MKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDK--HRVKF-AGEERTVSAQNFIIAVGGRPTYPDIP 269 (296)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~v~v-~g~~~~~~a~~vV~AtG~~p~~p~i~ 269 (296)
.... +.+...+...+++.+++++.+++..++. ..|++ ++ .++.||+||+|||++|+.|++|
T Consensus 55 ---~~~~-----------~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g--~~i~~d~lviAtG~~~~~~~ip 118 (437)
T 3sx6_A 55 ---WKER-----------DDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADG--NTVHYDYLMIATGPKLAFENVP 118 (437)
T ss_dssp ---SSCH-----------HHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTS--CEEECSEEEECCCCEECGGGST
T ss_pred ---ccCH-----------HHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCC--CEEECCEEEECCCCCcCcccCC
Confidence 0000 1111223445566799998877655443 46766 45 5689999999999999999999
Q ss_pred CCcc
Q psy7665 270 GARL 273 (296)
Q Consensus 270 G~~~ 273 (296)
|.++
T Consensus 119 G~~~ 122 (437)
T 3sx6_A 119 GSDP 122 (437)
T ss_dssp TCST
T ss_pred CCCc
Confidence 9874
No 78
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.23 E-value=4.3e-12 Score=116.59 Aligned_cols=108 Identities=21% Similarity=0.351 Sum_probs=72.5
Q ss_pred cccEEEECCChHHHHHHHHHHh-C------CCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhccc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAAS-M------NKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSD 187 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~-~------G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~ 187 (296)
.+||+||||||+|+.+|.+|++ . |.+|+||| +.+ .+||.| ..++.|.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie--~~~------~~gg~~-~~gv~p~~---------------- 57 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLE--MLP------TPWGLV-RSGVAPDH---------------- 57 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEE--SSS------SCSTHH-HHTSCTTC----------------
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEe--cCC------CCCCcc-ccccCCCC----------------
Confidence 4699999999999999999999 7 99999999 665 667766 23443321
Q ss_pred ccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEEcceeEEEEeCeEEEcCCCC-CCCC
Q psy7665 188 NFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGR-PTYP 266 (296)
Q Consensus 188 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v~g~~~~~~a~~vV~AtG~~-p~~p 266 (296)
.....+. ..+...+++.+++++.+.. . ...|++++ ..+.||+||+|||+. |+.|
T Consensus 58 ---------~~~~~~~-----------~~~~~~~~~~~v~~~~~v~--v-~~~v~~~~--~~~~~d~lViAtG~~~~~~~ 112 (456)
T 1lqt_A 58 ---------PKIKSIS-----------KQFEKTAEDPRFRFFGNVV--V-GEHVQPGE--LSERYDAVIYAVGAQSDRML 112 (456)
T ss_dssp ---------TGGGGGH-----------HHHHHHHTSTTEEEEESCC--B-TTTBCHHH--HHHHSSEEEECCCCCEECCC
T ss_pred ---------CCHHHHH-----------HHHHHHHhcCCCEEEeeEE--E-CCEEEECC--CeEeCCEEEEeeCCCCCCCC
Confidence 0111111 1223344556888876532 1 22344422 146899999999996 6888
Q ss_pred CCCCCc
Q psy7665 267 DIPGAR 272 (296)
Q Consensus 267 ~i~G~~ 272 (296)
++||.+
T Consensus 113 ~ipG~~ 118 (456)
T 1lqt_A 113 NIPGED 118 (456)
T ss_dssp CCTTTT
T ss_pred CCCCCC
Confidence 999976
No 79
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.22 E-value=1e-10 Score=116.64 Aligned_cols=138 Identities=19% Similarity=0.246 Sum_probs=84.5
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+||||||+|+.||.+|++.|++|+||| +.+ .+||+|.+ | |.. .+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie--~~~------~~GG~~~~--~-~k~------------------~i~- 176 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLD--ERA------EAGGTLLD--T-AGE------------------QID- 176 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSS------SSSGGGGG--S-SCC------------------EET-
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEe--CCC------CCCceecc--C-Ccc------------------ccC-
Confidence 45799999999999999999999999999999 666 67887762 2 100 000
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CcEEEcceEEE-Ee-CCEEE----------Ec-------ceeEEEEeC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKN-KIDYFNAKAVF-VD-KHRVK----------FA-------GEERTVSAQ 253 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~-~~-~~~v~----------v~-------g~~~~~~a~ 253 (296)
.....++ ...+...+... +++++.++... +. ...+. +. +....+.||
T Consensus 177 --~~~~~~~-----------~~~~~~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d 243 (965)
T 2gag_A 177 --GMDSSAW-----------IEQVTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAK 243 (965)
T ss_dssp --TEEHHHH-----------HHHHHHHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEE
T ss_pred --CCCHHHH-----------HHHHHHHHhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECC
Confidence 0000011 11222334443 88887664322 21 11111 10 222468999
Q ss_pred eEEEcCCCCCCCCCCCCCc-cceeec-----cc--CCCCC-CcEEEeecc
Q psy7665 254 NFIIAVGGRPTYPDIPGAR-LLRTLS-----LL--SGVDP-PTLIFLEHI 294 (296)
Q Consensus 254 ~vV~AtG~~p~~p~i~G~~-~~~~~s-----~~--~~~~~-~~~~~~~~~ 294 (296)
+||+|||+.|+.|++||.+ ..++++ ++ ....+ ++++|+..+
T Consensus 244 ~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~~l~~~~~~~gk~vvViGgG 293 (965)
T 2gag_A 244 QVVLATGAHERPIVFENNDRPGIMLAGAVRSYLNRYGVRAGARIAVATTN 293 (965)
T ss_dssp EEEECCCEEECCCCCBTCCSTTEEEHHHHHHHHHTTCEESCSSEEEEESS
T ss_pred EEEECCCCccCCCCCCCCCCCCEEEhHHHHHHHHhcCCCCCCeEEEEcCC
Confidence 9999999999999999976 335543 11 12223 567777654
No 80
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.22 E-value=1.6e-11 Score=113.66 Aligned_cols=136 Identities=22% Similarity=0.220 Sum_probs=81.6
Q ss_pred ccEEEECCChHHHHHHHHHHhC--CCcEEEEeccCCCCCCcccccCC-eeeccCCCchhHHHHhhhhHHHhhcccccCcc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASM--NKKVALFDFVTPSQHGTVWGLGG-TCVNVGCIPKKLFHRASLLNEEATTSDNFGFH 192 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE~~~~~~~g~~~~~GG-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~ 192 (296)
+||+|||||++|+.+|.+|++. |.+|+||| +.+ ..++ .|. +|.. .. +.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie--~~~------~~~~~~~~----~~~~-----------~~-----~~- 87 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLE--KGE------IYSYAQCG----LPYV-----------IS-----GA- 87 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEC--SSS------CCSBCGGG----HHHH-----------HT-----TS-
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEE--CCC------CCCCCCCC----cchh-----------hc-----CC-
Confidence 5999999999999999999996 89999999 443 2221 110 1100 00 00
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHH-HHCCcEEEcceE-EEEe--CCEEEE-c---ceeEEEEeCeEEEcCCCCCC
Q psy7665 193 MKKSFTWKTLVDNVQKYIRNLNNNYEKEL-EKNKIDYFNAKA-VFVD--KHRVKF-A---GEERTVSAQNFIIAVGGRPT 264 (296)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~~~--~~~v~v-~---g~~~~~~a~~vV~AtG~~p~ 264 (296)
..++..+..+ ....+ +..+++++.+.. ..++ .+.+.+ + |+..++.||+||+|||++|+
T Consensus 88 ---~~~~~~l~~~-----------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 88 ---IASTEKLIAR-----------NVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPV 153 (480)
T ss_dssp ---SSCGGGGBSS-----------CHHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred ---cCCHHHhhhc-----------CHHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCccc
Confidence 0011111000 01222 334899887543 3333 456666 3 43347999999999999999
Q ss_pred CCCCCCCc-cceeec-----ccCC------CCCCcEEEeecc
Q psy7665 265 YPDIPGAR-LLRTLS-----LLSG------VDPPTLIFLEHI 294 (296)
Q Consensus 265 ~p~i~G~~-~~~~~s-----~~~~------~~~~~~~~~~~~ 294 (296)
.|++||.+ +.+.++ .+.+ ..+++++|++.+
T Consensus 154 ~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG 195 (480)
T 3cgb_A 154 MPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGG 195 (480)
T ss_dssp CCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCH
T ss_pred CCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCC
Confidence 99999986 334332 1111 157788887653
No 81
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.21 E-value=4.1e-12 Score=116.88 Aligned_cols=114 Identities=17% Similarity=0.295 Sum_probs=74.5
Q ss_pred cccEEEECCChHHHHHHHHHHhCC--CcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMN--KKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFH 192 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G--~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~ 192 (296)
.+||+||||||+|+.+|.+|++.| .+|+||| +.+ .+||.| ..++.|.+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie--~~~------~~gg~~-~~g~~p~~--------------------- 55 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYE--KQL------VPFGLV-RFGVAPDH--------------------- 55 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEEC--SSS------SSCTHH-HHTSCTTC---------------------
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEe--CCC------cCCcee-ecccCCCC---------------------
Confidence 469999999999999999999998 9999999 555 556644 22333321
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEEcceeEEEEeCeEEEcCCCCC-CCCCCCCC
Q psy7665 193 MKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRP-TYPDIPGA 271 (296)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v~g~~~~~~a~~vV~AtG~~p-~~p~i~G~ 271 (296)
.....+ ...+...+++.+++++.+... ...|++++ ..+.||+||+|||+.| +.|++||.
T Consensus 56 ----~~~~~~-----------~~~~~~~~~~~gv~~~~~~~v---~~~V~~~~--~~~~~d~lVlAtGs~~~~~~~ipG~ 115 (460)
T 1cjc_A 56 ----PEVKNV-----------INTFTQTARSDRCAFYGNVEV---GRDVTVQE--LQDAYHAVVLSYGAEDHQALDIPGE 115 (460)
T ss_dssp ----GGGGGH-----------HHHHHHHHTSTTEEEEBSCCB---TTTBCHHH--HHHHSSEEEECCCCCEECCCCCTTT
T ss_pred ----ccHHHH-----------HHHHHHHHHhCCcEEEeeeEE---eeEEEecc--ceEEcCEEEEecCcCCCCCCCCCCC
Confidence 000111 122334456678888765321 12333332 2367999999999985 77899997
Q ss_pred c-cceeec
Q psy7665 272 R-LLRTLS 278 (296)
Q Consensus 272 ~-~~~~~s 278 (296)
+ ..++++
T Consensus 116 ~~~gv~~~ 123 (460)
T 1cjc_A 116 ELPGVFSA 123 (460)
T ss_dssp TSTTEEEH
T ss_pred CCCcEEEH
Confidence 6 334443
No 82
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.21 E-value=1.2e-11 Score=112.06 Aligned_cols=133 Identities=16% Similarity=0.158 Sum_probs=82.5
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC--cEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK--KVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGF 191 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~ 191 (296)
..+||+|||||++|+++|.+|++.|. +|+|+| +.+ .++. ..+..++.+... . .
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie--~~~------~~~~----~~~~~~~~~~~~-------~------~ 60 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVG--DEA------ERPY----DRPPLSKDFMAH-------G------D 60 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEE--SSC------SCCB----CSGGGGTHHHHH-------C------C
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEE--CCC------CCcc----cCCCCCHHHhCC-------C------c
Confidence 45799999999999999999999998 499999 443 1111 001001000000 0 0
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcce-EEEEe--CCEEEE-cceeEEEEeCeEEEcCCCCCCCCC
Q psy7665 192 HMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK-AVFVD--KHRVKF-AGEERTVSAQNFIIAVGGRPTYPD 267 (296)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~v~v-~g~~~~~~a~~vV~AtG~~p~~p~ 267 (296)
.+.+ .+. .+++.+++++.++ +..++ .+.|++ ++ .++.+|+||+|||++|..|+
T Consensus 61 ------------------~~~~--~~~-~~~~~~v~~~~~~~v~~i~~~~~~v~~~~g--~~~~~d~lviAtG~~~~~~~ 117 (408)
T 2gqw_A 61 ------------------AEKI--RLD-CKRAPEVEWLLGVTAQSFDPQAHTVALSDG--RTLPYGTLVLATGAAPRALP 117 (408)
T ss_dssp ------------------GGGS--BCC-CTTSCSCEEEETCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCG
T ss_pred ------------------hhhh--hHH-HHHHCCCEEEcCCEEEEEECCCCEEEECCC--CEEECCEEEECCCCCCCCCC
Confidence 0000 000 2345689988765 44444 467777 55 57899999999999999999
Q ss_pred C-CCCccceeec--c-----c--CCCCCCcEEEeecc
Q psy7665 268 I-PGARLLRTLS--L-----L--SGVDPPTLIFLEHI 294 (296)
Q Consensus 268 i-~G~~~~~~~s--~-----~--~~~~~~~~~~~~~~ 294 (296)
+ ||.++.+.+. . + ....+++++|++.+
T Consensus 118 i~~G~~~~v~~~~~~~~~~~l~~~~~~~~~vvViGgG 154 (408)
T 2gqw_A 118 TLQGATMPVHTLRTLEDARRIQAGLRPQSRLLIVGGG 154 (408)
T ss_dssp GGTTCSSCEEECCSHHHHHHHHTTCCTTCEEEEECCS
T ss_pred ccCCCCCcEEEECCHHHHHHHHHHhhcCCeEEEECCC
Confidence 9 9976333321 1 1 12346778887654
No 83
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.21 E-value=5.6e-12 Score=112.87 Aligned_cols=45 Identities=33% Similarity=0.535 Sum_probs=37.3
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGG 160 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG 160 (296)
..|||+||||||+|+++|+.|+++|++|+|+| +.+.+|.....|+
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~E--r~~~~~~~~~~g~ 47 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIE--KRPEIGSPVRCGE 47 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSSSTTCSCCSCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEe--CCCCCCCCCceec
Confidence 45899999999999999999999999999999 6665555434444
No 84
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.21 E-value=4.7e-12 Score=114.99 Aligned_cols=115 Identities=21% Similarity=0.254 Sum_probs=72.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCc--EEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKK--VALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGF 191 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~--V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~ 191 (296)
..+||+|||||++|+++|.+|+++|++ |+|+| +.+ ..+... |. +...-+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie--~~~------~~~y~~------~~---------------l~~~~~ 58 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIG--REP------EIPYER------PP---------------LSKEYL 58 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEE--SSS------SCCBCS------GG---------------GGTTTT
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEe--cCC------CCCcCc------cc---------------CCHHHH
Confidence 457999999999999999999999987 99999 443 111100 00 000000
Q ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcc-eEEEEe--CCEEEE-cceeEEEEeCeEEEcCCCCCCCCC
Q psy7665 192 HMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNA-KAVFVD--KHRVKF-AGEERTVSAQNFIIAVGGRPTYPD 267 (296)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~--~~~v~v-~g~~~~~~a~~vV~AtG~~p~~p~ 267 (296)
.. ......+ .......+.+.+++++.+ ++...+ .+.+.+ ++ ..+.+|++|+|||++|+.|+
T Consensus 59 ~~--~~~~~~~-----------~~~~~~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~~~~~~ 123 (415)
T 3lxd_A 59 AR--EKTFERI-----------CIRPAQFWEDKAVEMKLGAEVVSLDPAAHTVKLGDG--SAIEYGKLIWATGGDPRRLS 123 (415)
T ss_dssp TT--SSCSGGG-----------BSSCHHHHHHTTEEEEETCCEEEEETTTTEEEETTS--CEEEEEEEEECCCEECCCCB
T ss_pred cC--CCCHHHh-----------ccCCHHHHHHCCcEEEeCCEEEEEECCCCEEEECCC--CEEEeeEEEEccCCccCCCC
Confidence 00 0000000 001123345568998876 444443 346666 55 57899999999999999999
Q ss_pred CCCCc
Q psy7665 268 IPGAR 272 (296)
Q Consensus 268 i~G~~ 272 (296)
+||.+
T Consensus 124 i~g~~ 128 (415)
T 3lxd_A 124 CVGAD 128 (415)
T ss_dssp TTSSC
T ss_pred CCCcc
Confidence 99976
No 85
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.20 E-value=1.8e-11 Score=111.74 Aligned_cols=136 Identities=14% Similarity=0.198 Sum_probs=81.8
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC--cEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK--KVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFH 192 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~ 192 (296)
.+||+|||||++|+++|..|++.|. +|+|+| +.+ ..... .+..++. ...
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie--~~~------~~~~~----~~~l~~~---------------~~~-- 54 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVG--DAT------VIPHH----LPPLSKA---------------YLA-- 54 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC--SCC------SCCBC----SGGGGTT---------------TTT--
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEE--CCC------CCCCc----CCCCcHH---------------HhC--
Confidence 4699999999999999999999998 799999 433 11100 0000000 000
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcce-EEEEe--CCEEEE-cceeEEEEeCeEEEcCCCCCCCCCC
Q psy7665 193 MKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK-AVFVD--KHRVKF-AGEERTVSAQNFIIAVGGRPTYPDI 268 (296)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~v~v-~g~~~~~~a~~vV~AtG~~p~~p~i 268 (296)
. ......+ .......+++.+++++.+. +..++ .+.|++ ++ .++.||+||+|||++|+.|++
T Consensus 55 ~--~~~~~~~-----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~g--~~~~~d~lviAtG~~p~~~~i 119 (431)
T 1q1r_A 55 G--KATAESL-----------YLRTPDAYAAQNIQLLGGTQVTAINRDRQQVILSDG--RALDYDRLVLATGGRPRPLPV 119 (431)
T ss_dssp T--CSCSGGG-----------BSSCHHHHHHTTEEEECSCCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECCCGG
T ss_pred C--CCChHHh-----------cccCHHHHHhCCCEEEeCCEEEEEECCCCEEEECCC--CEEECCEEEEcCCCCccCCCC
Confidence 0 0000000 0001233456689988764 33333 356777 45 578999999999999999999
Q ss_pred CCCcc-c---eee--cc-------cCCCCCCcEEEeecc
Q psy7665 269 PGARL-L---RTL--SL-------LSGVDPPTLIFLEHI 294 (296)
Q Consensus 269 ~G~~~-~---~~~--s~-------~~~~~~~~~~~~~~~ 294 (296)
||.+. . +.+ +. .....++++++++++
T Consensus 120 ~G~~~~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG 158 (431)
T 1q1r_A 120 ASGAVGKANNFRYLRTLEDAECIRRQLIADNRLVVIGGG 158 (431)
T ss_dssp GTTHHHHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCS
T ss_pred CCcccCCCceEEEECCHHHHHHHHHHhhcCCeEEEECCC
Confidence 99752 2 322 11 123457788888653
No 86
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.19 E-value=5.7e-11 Score=111.99 Aligned_cols=137 Identities=19% Similarity=0.240 Sum_probs=79.9
Q ss_pred ccEEEECCChHHHHHHHHHHhC--CCcEEEEeccCCCCCCcccccCCeeeccCC-CchhHHHHhhhhHHHhhcccccCcc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASM--NKKVALFDFVTPSQHGTVWGLGGTCVNVGC-IPKKLFHRASLLNEEATTSDNFGFH 192 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~g~~ 192 (296)
.||+|||||++|+++|.+|++. |.+|+||| +.+ ..+. ..| +|. .. .+..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie--~~~------~~~~----~~~~l~~-----------~~-----~~~~ 53 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFE--RGE------YVSF----ANCGLPY-----------HI-----SGEI 53 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEEC--SSS------CSSB----CGGGHHH-----------HH-----TSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEE--CCC------Cccc----cccCchH-----------Hh-----cCCc
Confidence 3899999999999999999998 78999999 544 2221 000 010 00 0000
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcce-EEEEe--CCEEEE-c---ceeEEEEeCeEEEcCCCCCCC
Q psy7665 193 MKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK-AVFVD--KHRVKF-A---GEERTVSAQNFIIAVGGRPTY 265 (296)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~--~~~v~v-~---g~~~~~~a~~vV~AtG~~p~~ 265 (296)
. .....+..+ .....+..+++++.+. +..++ ...+.+ + +....+.+|+||+|||++|+.
T Consensus 54 ~---~~~~~~~~~-----------~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~ 119 (565)
T 3ntd_A 54 A---QRSALVLQT-----------PESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIV 119 (565)
T ss_dssp C---CGGGGBCCC-----------HHHHHHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred C---ChHHhhccC-----------HHHHHHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCC
Confidence 0 000000000 0111123478886543 33332 445665 2 544679999999999999999
Q ss_pred CCCCCCccc-eeecc-------c----CCCCCCcEEEeecc
Q psy7665 266 PDIPGARLL-RTLSL-------L----SGVDPPTLIFLEHI 294 (296)
Q Consensus 266 p~i~G~~~~-~~~s~-------~----~~~~~~~~~~~~~~ 294 (296)
|++||.+.. +.+.. + ....+++++|++++
T Consensus 120 p~ipG~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG 160 (565)
T 3ntd_A 120 PPIPGVDNPLTHSLRNIPDMDRILQTIQMNNVEHATVVGGG 160 (565)
T ss_dssp CCCTTCCSTTEECCSSHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred CCCCCCCCCCEEEeCCHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 999998633 33321 0 12456788888754
No 87
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.18 E-value=1.3e-10 Score=106.71 Aligned_cols=35 Identities=23% Similarity=0.209 Sum_probs=32.2
Q ss_pred ccccEEEECCChHHHHHHHHHHhCC-----CcEEEEeccCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMN-----KKVALFDFVTPS 150 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G-----~~V~iiE~~~~~ 150 (296)
..+||+|||||++|+++|..|++.| .+|+||| +.+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE--~~~ 68 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLD--KQG 68 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEE--SCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEe--cCC
Confidence 4579999999999999999999999 9999999 555
No 88
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.18 E-value=1.2e-10 Score=109.82 Aligned_cols=32 Identities=50% Similarity=0.770 Sum_probs=30.6
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..|||+|||||++|++||..|++.|.+|+|+|
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIE 57 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFV 57 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEE
Confidence 35899999999999999999999999999999
No 89
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.17 E-value=1.8e-11 Score=110.78 Aligned_cols=113 Identities=19% Similarity=0.282 Sum_probs=70.5
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC--cEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK--KVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
.||+|||||++|+++|.+|+++|+ +|+||| +.+ ..+.... .++. .+.......
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie--~~~------~~~y~~~---~l~~--------------~~l~~~~~~ 56 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALIN--DEK------HLPYQRP---PLSK--------------AYLKSGGDP 56 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEEC--CSS------SSSBCSG---GGGT--------------GGGGSCCCT
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEe--CCC------CCCCCCc---cCCH--------------HHHCCCCCH
Confidence 489999999999999999999998 899999 433 1111000 0000 000000000
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEe--CCEEEE-cceeEEEEeCeEEEcCCCCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVD--KHRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPG 270 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~v~v-~g~~~~~~a~~vV~AtG~~p~~p~i~G 270 (296)
. .+ .......+.+.+++++..++...+ .+.+.+ ++ ..+.+|++|+|||++|+.|++||
T Consensus 57 ~-~~----------------~~~~~~~~~~~~i~~~~~~v~~id~~~~~v~~~~g--~~~~~d~lvlAtG~~p~~~~i~g 117 (404)
T 3fg2_P 57 N-SL----------------MFRPEKFFQDQAIELISDRMVSIDREGRKLLLASG--TAIEYGHLVLATGARNRMLDVPN 117 (404)
T ss_dssp T-SS----------------BSSCHHHHHHTTEEEECCCEEEEETTTTEEEESSS--CEEECSEEEECCCEEECCCCSTT
T ss_pred H-Hc----------------cCCCHHHHHhCCCEEEEEEEEEEECCCCEEEECCC--CEEECCEEEEeeCCCccCCCCCC
Confidence 0 00 000112334568888775554443 346666 55 57899999999999999999999
Q ss_pred Cc
Q psy7665 271 AR 272 (296)
Q Consensus 271 ~~ 272 (296)
.+
T Consensus 118 ~~ 119 (404)
T 3fg2_P 118 AS 119 (404)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 90
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.16 E-value=2.2e-11 Score=115.44 Aligned_cols=139 Identities=17% Similarity=0.230 Sum_probs=82.4
Q ss_pred ccccEEEECCChHHHHHHHHHHhC--CCcEEEEeccCCCCCCcccccCCeeeccCC-CchhHHHHhhhhHHHhhcccccC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASM--NKKVALFDFVTPSQHGTVWGLGGTCVNVGC-IPKKLFHRASLLNEEATTSDNFG 190 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~g 190 (296)
...||+|||||++|++||.+|++. |.+|+||| +.+ .++- ..| +|. . ..+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie--~~~------~~~~----~~~~lp~-----------~-----~~g 86 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVE--RGE------YISF----ANCGLPY-----------Y-----IGG 86 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEEC--SSS------CSSB----CGGGHHH-----------H-----HTT
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEE--CCC------Cccc----cCCCCch-----------h-----hcC
Confidence 456999999999999999999998 89999999 544 2221 000 000 0 000
Q ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceE-EEE--eCCEEEE----cceeEEEEeCeEEEcCCCCC
Q psy7665 191 FHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKA-VFV--DKHRVKF----AGEERTVSAQNFIIAVGGRP 263 (296)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~--~~~~v~v----~g~~~~~~a~~vV~AtG~~p 263 (296)
.. ..... .+...+....+..++++..+.. ... ..+.+.+ ++....+.+|+||+|||++|
T Consensus 87 ~~----~~~~~----------~~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 87 VI----TERQK----------LLVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp SS----CCGGG----------GBSSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred cC----CChHH----------hhccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCC
Confidence 00 00000 0001112223455888865433 222 3455665 24345789999999999999
Q ss_pred CCCCCCCC-c-cceeecc--cC---------CCCCCcEEEeecc
Q psy7665 264 TYPDIPGA-R-LLRTLSL--LS---------GVDPPTLIFLEHI 294 (296)
Q Consensus 264 ~~p~i~G~-~-~~~~~s~--~~---------~~~~~~~~~~~~~ 294 (296)
..|++||. + ..++++. .. ...+++++|++.+
T Consensus 153 ~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG 196 (588)
T 3ics_A 153 IVPSIPGIEEAKALFTLRNVPDTDRIKAYIDEKKPRHATVIGGG 196 (588)
T ss_dssp CCCCCTTTTTCTTEEECSSHHHHHHHHHHHHHHCCSEEEEECCS
T ss_pred CCCCCCCcccCCCeEEeCCHHHHHHHHHHHhhcCCCeEEEECCC
Confidence 99999998 3 3344331 11 1457788888754
No 91
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.16 E-value=1.9e-11 Score=110.63 Aligned_cols=114 Identities=15% Similarity=0.179 Sum_probs=73.5
Q ss_pred ccEEEECCChHHHHHHHHHHh---CCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcc
Q psy7665 116 YDLCVIGGGSGGISAAKEAAS---MNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFH 192 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~---~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~ 192 (296)
.||+|||||++|+++|.+|++ .|++|+||| +.+ ..+... +.+. ...+..
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie--~~~------~~~~~~----~~~~----------------~~~~~~ 53 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVIN--KSR------FSYFRP----ALPH----------------VAIGVR 53 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEE--SSS------EEEECC----SSCC----------------CCSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEe--CCC------Cceecc----chhh----------------cccCCc
Confidence 389999999999999999999 899999999 444 221110 0000 000000
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEe--CCEEEE-cc--eeEEEEeCeEEEcCCCCCCCCC
Q psy7665 193 MKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVD--KHRVKF-AG--EERTVSAQNFIIAVGGRPTYPD 267 (296)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~v~v-~g--~~~~~~a~~vV~AtG~~p~~p~ 267 (296)
+..++ ...+...+++.+++++.+++...+ ...|++ ++ +..++.||+||+|||++|..|+
T Consensus 54 -----~~~~~-----------~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~~ 117 (409)
T 3h8l_A 54 -----DVDEL-----------KVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATEL 117 (409)
T ss_dssp -----CCCCE-----------EEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGGG
T ss_pred -----CHHHH-----------HHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCccC
Confidence 00000 111233445568999887665443 346766 33 2356899999999999999999
Q ss_pred CCCCcc
Q psy7665 268 IPGARL 273 (296)
Q Consensus 268 i~G~~~ 273 (296)
+||.++
T Consensus 118 ipG~~~ 123 (409)
T 3h8l_A 118 VKGWDK 123 (409)
T ss_dssp SBTHHH
T ss_pred CCChhh
Confidence 999875
No 92
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.15 E-value=1.1e-10 Score=108.41 Aligned_cols=136 Identities=17% Similarity=0.184 Sum_probs=82.4
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+++|++|++. ++|+||| +.+ .+||.+..... ..++++.
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie--~~~------~~GG~~~~~~~-------------------~~~g~~~ 158 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIE--ERG------WLGGDMWLKGI-------------------KQEGFNK 158 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEEC--TTS------SSSCSGGGTCS-------------------EETTTTE
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEe--CCC------CCCCeeecccc-------------------ccCCCCC
Confidence 457999999999999999999999 9999999 665 67776543210 1112110
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEE---EeCCEEEE----cceeEEEEeCeEEEcCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVF---VDKHRVKF----AGEERTVSAQNFIIAVGGRPTYP 266 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~v~v----~g~~~~~~a~~vV~AtG~~p~~p 266 (296)
...++ ...+...+ ..+++++...... .....+.+ +++...+.+|++|+|||+.|+.|
T Consensus 159 ----~~~~~-----------~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 159 ----DSRKV-----------VEELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp ----EHHHH-----------HHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCC
T ss_pred ----CHHHH-----------HHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCC
Confidence 11111 11122222 4578876654321 12222222 34334789999999999999999
Q ss_pred CCCCCcc-ceeec--------ccCCCCCCcEEEeec
Q psy7665 267 DIPGARL-LRTLS--------LLSGVDPPTLIFLEH 293 (296)
Q Consensus 267 ~i~G~~~-~~~~s--------~~~~~~~~~~~~~~~ 293 (296)
++||.+. .+++. .+.....++.+++..
T Consensus 223 ~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~vvViGg 258 (493)
T 1y56_A 223 LFENNDMPGVFRRDFALEVMNVWEVAPGRKVAVTGS 258 (493)
T ss_dssp CCTTTTSTTEEEHHHHHHHHHTSCBCSCSEEEEEST
T ss_pred CCCCCCCCCEEEcHHHHHHHHhcccCCCCEEEEECC
Confidence 9999763 34442 112233456666654
No 93
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.14 E-value=1.3e-10 Score=109.66 Aligned_cols=32 Identities=31% Similarity=0.401 Sum_probs=30.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..|||+|||||++|++||..|++.|.+|+|+|
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIE 51 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLIT 51 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEE
Confidence 46899999999999999999999999999999
No 94
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.12 E-value=3.7e-10 Score=103.47 Aligned_cols=144 Identities=22% Similarity=0.348 Sum_probs=76.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCccccc--CCeeeccC-CCchhHHHH-------------hh
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGL--GGTCVNVG-CIPKKLFHR-------------AS 177 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~--GG~~~~~~-~~p~~~~~~-------------~~ 177 (296)
+.+||+|||||++|+++|+.|++.|.+|+|+| +.+.+|.+... ||.|.... +.+..++.. ..
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llE--k~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLD--KGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIF 102 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEE--CCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhc
Confidence 56899999999999999999999999999999 66655554322 23332211 111111110 00
Q ss_pred hhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceE-E-E-EeCCE---EEE-cceeEEE
Q psy7665 178 LLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKA-V-F-VDKHR---VKF-AGEERTV 250 (296)
Q Consensus 178 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~-~~~~~---v~v-~g~~~~~ 250 (296)
.......++..+|+++...... .+.. .......+...+...+++.|++++.++. . . .+... |++ +| ..+
T Consensus 103 ~~~~~~~~~~~~G~~~~~~~~g-~~~p-~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G--~~i 178 (447)
T 2i0z_A 103 NNEDIITFFENLGVKLKEEDHG-RMFP-VSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTG--EVL 178 (447)
T ss_dssp CHHHHHHHHHHTTCCEEECGGG-EEEE-TTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTC--CEE
T ss_pred CHHHHHHHHHhcCCceEEeeCC-EEEC-CCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCC--CEE
Confidence 0111222222333322110000 0000 0000123334455666778999986532 2 1 23333 444 44 368
Q ss_pred EeCeEEEcCCCCC
Q psy7665 251 SAQNFIIAVGGRP 263 (296)
Q Consensus 251 ~a~~vV~AtG~~p 263 (296)
.||.||+|+|..+
T Consensus 179 ~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 179 ETNHVVIAVGGKS 191 (447)
T ss_dssp ECSCEEECCCCSS
T ss_pred ECCEEEECCCCCc
Confidence 9999999999876
No 95
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.11 E-value=2e-10 Score=91.90 Aligned_cols=109 Identities=21% Similarity=0.206 Sum_probs=65.4
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKK 195 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~ 195 (296)
+||+|||||++|+++|..|++.|.+|+|+| +.+ ..-..+... ....+++.
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie--~~~------~~~~~~~~~--------------------~~~~~~~~-- 51 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLD--GGR------SKVKGVSRV--------------------PNYPGLLD-- 51 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEE--CSC------CTTTTCSCC--------------------CCSTTCTT--
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEe--CCC------CcccCchhh--------------------hccCCCcC--
Confidence 699999999999999999999999999999 433 000000000 00011110
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEE--eCC--EEEEcceeEEEEeCeEEEcCCCCCCCCC
Q psy7665 196 SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFV--DKH--RVKFAGEERTVSAQNFIIAVGGRPTYPD 267 (296)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~--~v~v~g~~~~~~a~~vV~AtG~~p~~p~ 267 (296)
...... +...+.+.+++.+++++.++.... +.. .++++++ ++.+|.||+|+|.+|..+.
T Consensus 52 ~~~~~~-----------~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g--~i~ad~vI~A~G~~~~~~~ 114 (180)
T 2ywl_A 52 EPSGEE-----------LLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG--VEKAERLLLCTHKDPTLPS 114 (180)
T ss_dssp CCCHHH-----------HHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC--EEEEEEEEECCTTCCHHHH
T ss_pred CCCHHH-----------HHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC--EEEECEEEECCCCCCCccc
Confidence 111222 223344556677999877633222 222 3333442 7899999999999885433
No 96
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.11 E-value=1.2e-09 Score=103.13 Aligned_cols=38 Identities=34% Similarity=0.482 Sum_probs=34.1
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHG 153 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g 153 (296)
..+||+|||||++|+++|+.|+++|.+|+|+| +.+..|
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlE--k~~~~g 162 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIE--KEPVIG 162 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEe--CCCCCC
Confidence 46899999999999999999999999999999 666444
No 97
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.10 E-value=7.4e-10 Score=95.33 Aligned_cols=35 Identities=37% Similarity=0.566 Sum_probs=32.0
Q ss_pred ccccEEEECCChHHHHHHHHHHhC-CCcEEEEeccCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASM-NKKVALFDFVTPS 150 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~-G~~V~iiE~~~~~ 150 (296)
..+||+|||||++|+++|+.|++. |.+|+|+| +.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viE--k~~ 73 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIE--QSV 73 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEE--SSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEE--CCC
Confidence 457999999999999999999997 99999999 555
No 98
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.09 E-value=2.1e-11 Score=111.19 Aligned_cols=112 Identities=24% Similarity=0.369 Sum_probs=70.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCC--CcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMN--KKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G--~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
.+|||||||++|+++|.+|++.+ .+|+||| +.+ .. .+.|....... |.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~--~~~------~~-------~~~p~l~~v~~-------------g~-- 52 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLIS--DRP------YF-------GFTPAFPHLAM-------------GW-- 52 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEEC--SSS------EE-------ECGGGHHHHHH-------------TC--
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEc--CCC------CC-------ccCccHHHHhc-------------CC--
Confidence 37999999999999999999876 7899999 443 10 01111000000 00
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEe--CCEEEE-cceeEEEEeCeEEEcCCCCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVD--KHRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPG 270 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~v~v-~g~~~~~~a~~vV~AtG~~p~~p~i~G 270 (296)
.+. +++...+...+++.+++++.+++..++ .+.|++ +| .++.||++|+|||+++. +++||
T Consensus 53 ---~~~-----------~~i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g--~~i~YD~LViAtG~~~~-~~i~G 115 (430)
T 3hyw_A 53 ---RKF-----------EDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSG--KKIEYDYLVIATGPKLV-FGAEG 115 (430)
T ss_dssp ---SCG-----------GGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTC--CEEECSEEEECCCCEEE-CCSBT
T ss_pred ---CCH-----------HHhhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCC--CEEECCEEEEeCCCCcc-CCccC
Confidence 000 000001122345568999988876654 457777 56 57999999999999864 56898
Q ss_pred Cccc
Q psy7665 271 ARLL 274 (296)
Q Consensus 271 ~~~~ 274 (296)
.++.
T Consensus 116 ~~e~ 119 (430)
T 3hyw_A 116 QEEN 119 (430)
T ss_dssp HHHH
T ss_pred cccC
Confidence 7643
No 99
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.09 E-value=6.4e-11 Score=118.82 Aligned_cols=114 Identities=19% Similarity=0.337 Sum_probs=73.3
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC-cEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK-KVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFH 192 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~ 192 (296)
.++||+||||||+|+++|.+|+++|+ +|+||| +.+ .+||.+.. .+|. +..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E--~~~------~~GG~~~~--~ip~------------------~~~- 236 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFE--KQE------YVGGLSTS--EIPQ------------------FRL- 236 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEE--SSS------SCSTHHHH--TSCT------------------TTS-
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEe--CCC------CCCccccc--cCCc------------------ccC-
Confidence 46799999999999999999999999 799999 655 67885311 1111 111
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeCCEEEE-cceeEEEEeCeEEEcCCC-CCCCCCC-C
Q psy7665 193 MKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKF-AGEERTVSAQNFIIAVGG-RPTYPDI-P 269 (296)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~v~v-~g~~~~~~a~~vV~AtG~-~p~~p~i-~ 269 (296)
.. ... ......+++.|++++.++.. ..+.+++ ++ ..+.||+||+|||+ +|+.+++ +
T Consensus 237 -----~~-~~~-----------~~~~~~~~~~gv~~~~~~~v--~~~~v~~~~~--~~~~~d~vvlAtGa~~p~~l~~~~ 295 (1025)
T 1gte_A 237 -----PY-DVV-----------NFEIELMKDLGVKIICGKSL--SENEITLNTL--KEEGYKAAFIGIGLPEPKTDDIFQ 295 (1025)
T ss_dssp -----CH-HHH-----------HHHHHHHHTTTCEEEESCCB--STTSBCHHHH--HHTTCCEEEECCCCCEECCCGGGT
T ss_pred -----CH-HHH-----------HHHHHHHHHCCcEEEcccEe--ccceEEhhhc--CccCCCEEEEecCCCCCCCCCCCC
Confidence 10 111 11134556779998876532 1223444 33 24679999999998 5877664 4
Q ss_pred CCc--cceee
Q psy7665 270 GAR--LLRTL 277 (296)
Q Consensus 270 G~~--~~~~~ 277 (296)
|.+ ..+++
T Consensus 296 G~~~~~gv~~ 305 (1025)
T 1gte_A 296 GLTQDQGFYT 305 (1025)
T ss_dssp TCCTTTTEEE
T ss_pred CCCCCCCEEE
Confidence 653 33444
No 100
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.09 E-value=3.5e-10 Score=104.30 Aligned_cols=150 Identities=19% Similarity=0.254 Sum_probs=81.1
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcc-cccCCee--eccCCCchhHHHHh-----------------
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTV-WGLGGTC--VNVGCIPKKLFHRA----------------- 176 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~-~~~GG~~--~~~~~~p~~~~~~~----------------- 176 (296)
||+|||||++|+++|++|++.|.+|+|+|+ ....|.+ +..||.+ .+..+.|...+...
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek--~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~ 78 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISK--RIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVT 78 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeC--CCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHH
Confidence 799999999999999999999999999994 3323332 2335543 33345554433211
Q ss_pred hhhHHHhhcccccCccccc------cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcce-EEE-EeCCEE---EEcc
Q psy7665 177 SLLNEEATTSDNFGFHMKK------SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK-AVF-VDKHRV---KFAG 245 (296)
Q Consensus 177 ~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~~~~~v---~v~g 245 (296)
......+.++..+|++++. ...++............+...+.+.+++.+++++.++ +.. .+...+ .+..
T Consensus 79 ~~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v~l~~~~~~v~Gv~v~~ 158 (472)
T 2e5v_A 79 SEAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLVEIRVKDGKVTGFVTEK 158 (472)
T ss_dssp HHHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEEEEEEETTEEEEEEETT
T ss_pred HHHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEEEEEEeCCEEEEEEEEe
Confidence 0112233444445544321 0000000000000112233344555566799998764 322 233443 3421
Q ss_pred eeEEEEeCeEEEcCCCCCCCCCC
Q psy7665 246 EERTVSAQNFIIAVGGRPTYPDI 268 (296)
Q Consensus 246 ~~~~~~a~~vV~AtG~~p~~p~i 268 (296)
....+.||.||+|||+.+..+++
T Consensus 159 ~~g~~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 159 RGLVEDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp TEEECCCSEEEECCCCCGGGSSS
T ss_pred CCCeEEeeeEEECCCCCcccCcc
Confidence 22457799999999987766544
No 101
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.09 E-value=1.8e-10 Score=107.06 Aligned_cols=57 Identities=19% Similarity=0.191 Sum_probs=39.2
Q ss_pred CEEEE----cceeEEEEeCeEEEcCCCCCCCCCCCCCccceeec-ccC---------CCCCCcEEEeeccC
Q psy7665 239 HRVKF----AGEERTVSAQNFIIAVGGRPTYPDIPGARLLRTLS-LLS---------GVDPPTLIFLEHIS 295 (296)
Q Consensus 239 ~~v~v----~g~~~~~~a~~vV~AtG~~p~~p~i~G~~~~~~~s-~~~---------~~~~~~~~~~~~~~ 295 (296)
|.|++ +++..++.|+.||+|||..|.+|.+++....+++| .|. ....++.+||+.++
T Consensus 186 ~~V~~~~~~~g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~ 256 (501)
T 4b63_A 186 FTVRSRNVETGEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQ 256 (501)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSH
T ss_pred EEEEEecCCCceEEEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhccccccCCcEEEEECCcH
Confidence 56666 34457899999999999999998876655555555 221 23455688887653
No 102
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.08 E-value=3.3e-11 Score=108.76 Aligned_cols=112 Identities=23% Similarity=0.281 Sum_probs=71.9
Q ss_pred ccEEEECCChHHHHHHHHHHhCC--CcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMN--KKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G--~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
.+|||||||++|+++|.+|++.+ .+|+||| +.+ .... .+....+.. +.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie--~~~------~~~~-----~p~~~~v~~---------------g~-- 52 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIE--PNE------TYYT-----CYMSNEVIG---------------GD-- 52 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEEC--SCS------SEEC-----STTHHHHHH---------------TS--
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEe--CCC------CCCC-----ccCHHHHhc---------------CC--
Confidence 47999999999999999999876 5899999 433 1100 011000000 00
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEe--CCEEEE-cceeEEEEeCeEEEcCCCCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVD--KHRVKF-AGEERTVSAQNFIIAVGGRPTYPDIPG 270 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~~v~v-~g~~~~~~a~~vV~AtG~~p~~p~i~G 270 (296)
.+...+. .. ...+...+++++.+++..++ .+.+.+ ++ .++.||++|+|||+++..+++||
T Consensus 53 ---~~~~~~~-------~~-----~~~~~~~gv~~i~~~v~~id~~~~~v~~~~g--~~i~yd~LviAtG~~~~~~~i~G 115 (401)
T 3vrd_B 53 ---RELASLR-------VG-----YDGLRAHGIQVVHDSALGIDPDKKLVKTAGG--AEFAYDRCVVAPGIDLLYDKIEG 115 (401)
T ss_dssp ---SCGGGGE-------EC-----SHHHHHTTCEEECSCEEEEETTTTEEEETTS--CEEECSEEEECCCEEECGGGSBT
T ss_pred ---CCHHHHh-------hC-----HHHHHHCCCEEEEeEEEEEEccCcEEEeccc--ceeecceeeeccCCccccCCccC
Confidence 0000000 00 11234468999988876654 345666 55 67999999999999999999999
Q ss_pred Cccc
Q psy7665 271 ARLL 274 (296)
Q Consensus 271 ~~~~ 274 (296)
.++.
T Consensus 116 ~~e~ 119 (401)
T 3vrd_B 116 YSEA 119 (401)
T ss_dssp CCSG
T ss_pred chhh
Confidence 8754
No 103
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.07 E-value=2e-11 Score=117.81 Aligned_cols=161 Identities=12% Similarity=0.002 Sum_probs=101.6
Q ss_pred CCCChHHHH-HHHHHhhcCCCCceeeccceeeeeeeccccCC--------ccchhhhccC--cceeeccccCCCCccccE
Q psy7665 50 IHPTCAEAI-SLSWIKGYNIEPEVIKLHTPYLVLAKARFLLP--------TLECQEVYHD--GRFYDYLDNNFQTYDYDL 118 (296)
Q Consensus 50 ~~pt~~e~l-~v~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~~~~~~~dV 118 (296)
++....+.+ ++.+++++.++.+....+.+|.+++++|..+. .++.++.... ....+.+... ...+.+|
T Consensus 448 ~~~~~~~~~~gv~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~~~~~l~~~-~~~g~~V 526 (690)
T 3k30_A 448 YREAVLAELPNVEIYRESPMTGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAGR-LPDGKKV 526 (690)
T ss_dssp HHHHHHHTCTTEEEESSCCCCHHHHHHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEECHHHHHTTC-CCSSSEE
T ss_pred HHHHHHHHcCCCEEEECCeecHHHHhhcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEcHHHHhCCC-CCCCCEE
Confidence 333333443 55566677888887788899999999998732 2333322211 1112233322 2234579
Q ss_pred EEEC--CChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccccc
Q psy7665 119 CVIG--GGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKS 196 (296)
Q Consensus 119 vVIG--gG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~ 196 (296)
+||| +|..|+++|..|++.|.+|++++ +.+ .+...
T Consensus 527 vViG~ggG~~g~e~A~~L~~~g~~Vtlv~--~~~------~l~~~----------------------------------- 563 (690)
T 3k30_A 527 VVYDDDHYYLGGVVAELLAQKGYEVSIVT--PGA------QVSSW----------------------------------- 563 (690)
T ss_dssp EEEECSCSSHHHHHHHHHHHTTCEEEEEE--SSS------STTGG-----------------------------------
T ss_pred EEEcCCCCccHHHHHHHHHhCCCeeEEEe--ccc------ccccc-----------------------------------
Confidence 9999 99999999999999999999999 443 11110
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceE-EEEeCCEEEE----cceeEEEEeCeEEEcCCCCCCC
Q psy7665 197 FTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKA-VFVDKHRVKF----AGEERTVSAQNFIIAVGGRPTY 265 (296)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~v~v----~g~~~~~~a~~vV~AtG~~p~~ 265 (296)
... ......+...+++.||+++.++. ..+....+.+ +++..++.+|.||+|+|.+|+.
T Consensus 564 ~~~-----------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 564 TNN-----------TFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPRE 626 (690)
T ss_dssp GGG-----------GTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEECC
T ss_pred ccc-----------chhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCCh
Confidence 000 00122345566778999988754 3344455444 3444679999999999988764
No 104
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.06 E-value=7.6e-10 Score=104.39 Aligned_cols=40 Identities=28% Similarity=0.401 Sum_probs=34.8
Q ss_pred CccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCc
Q psy7665 113 TYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGT 154 (296)
Q Consensus 113 ~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~ 154 (296)
+..+||+|||||++|+++|+.|+++|.+|+||| +.+..|.
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlE--k~~~~gg 158 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVD--KAPFSGG 158 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEEC--SSSSSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEe--CCCCCCC
Confidence 367899999999999999999999999999999 5554443
No 105
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.06 E-value=3.3e-09 Score=93.90 Aligned_cols=32 Identities=31% Similarity=0.426 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
.+||+|||||++|+++|++|+++|++|+|+|+
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~ 35 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEVLVAEA 35 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 47999999999999999999999999999993
No 106
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.05 E-value=1.7e-10 Score=107.11 Aligned_cols=32 Identities=22% Similarity=0.355 Sum_probs=29.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
...+|||||||++|+.+|.+|++.+++|+|||
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId 72 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIIS 72 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEEC
Confidence 34589999999999999999999999999999
No 107
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.05 E-value=2.9e-09 Score=99.20 Aligned_cols=38 Identities=32% Similarity=0.479 Sum_probs=33.9
Q ss_pred CccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCC
Q psy7665 113 TYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQH 152 (296)
Q Consensus 113 ~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~ 152 (296)
+..+||||||||++|+++|++|+++|.+|+|+| +.+..
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlE--k~~~~ 76 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLE--RTSGW 76 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEe--CCCCC
Confidence 356899999999999999999999999999999 55533
No 108
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.05 E-value=4.4e-10 Score=104.34 Aligned_cols=135 Identities=16% Similarity=0.092 Sum_probs=74.5
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
..+||+|||||++|+++|..|++.|.+|+||| +.+ .+|+ +....+.|............ .....+....
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE--k~~------~~g~-~~~~~~~~~~~~~l~~~g~~--~~~~~~~~~~ 159 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVE--KRI------KFSR-HNVLHLWPFTIHDLRALGAK--KFYGRFCTGT 159 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE--SCS------SCCC-CCEEECCHHHHHHHHTTTHH--HHCTTTTCTT
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEE--ecc------ccCC-CCcccCChhHHHHHHHcCCc--cccccccccc
Confidence 56799999999999999999999999999999 555 3333 22222333211111000000 0000110000
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceE-EEEe-------CCEEEE--c-ce-eEEEEeCeEEEcCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKA-VFVD-------KHRVKF--A-GE-ERTVSAQNFIIAVGG 261 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~-------~~~v~v--~-g~-~~~~~a~~vV~AtG~ 261 (296)
-..++. ..+...+.+.+++.|++++.++. .... ...+++ . ++ ..++.||+||+|+|.
T Consensus 160 ~~~~~~-----------~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~ 228 (497)
T 2bry_A 160 LDHISI-----------RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGG 228 (497)
T ss_dssp CCEEEH-----------HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCT
T ss_pred cccCCH-----------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCC
Confidence 001111 22233445556667999877643 2221 234555 2 21 246899999999999
Q ss_pred CCCCCCCCC
Q psy7665 262 RPTYPDIPG 270 (296)
Q Consensus 262 ~p~~p~i~G 270 (296)
++....+.+
T Consensus 229 ~S~~r~~~~ 237 (497)
T 2bry_A 229 KFVPEGFTI 237 (497)
T ss_dssp TCCCTTCEE
T ss_pred Ccccccccc
Confidence 876654443
No 109
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.03 E-value=1.2e-09 Score=98.83 Aligned_cols=33 Identities=30% Similarity=0.354 Sum_probs=30.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
..+||+|||||++|+++|+.|+++|.+|+|+|+
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~ 36 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEK 36 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 357999999999999999999999999999993
No 110
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.01 E-value=1.9e-09 Score=101.06 Aligned_cols=32 Identities=28% Similarity=0.462 Sum_probs=30.1
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
..+||+|||||++|+++|++|++ |.+|+|+|+
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk 38 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSK 38 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECS
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEEC
Confidence 46799999999999999999999 999999993
No 111
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.99 E-value=1.7e-09 Score=102.73 Aligned_cols=33 Identities=24% Similarity=0.356 Sum_probs=31.1
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
..+||||||||++|++||+.|++.|.+|+|+|+
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK 49 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTK 49 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEec
Confidence 457999999999999999999999999999994
No 112
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.99 E-value=1.2e-10 Score=106.10 Aligned_cols=106 Identities=25% Similarity=0.417 Sum_probs=66.6
Q ss_pred ccEEEECCChHHHHHHHHHHh--CCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccc
Q psy7665 116 YDLCVIGGGSGGISAAKEAAS--MNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM 193 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~--~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~ 193 (296)
+||+|||||++|+++|.+|++ .|++|+||| +.+ ..++. |...... . +..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie--~~~------~~~~~-------~~~~~~~-------~------g~~- 53 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLIS--DRP------YFGFT-------PAFPHLA-------M------GWR- 53 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEEC--SSS------EEECG-------GGHHHHH-------H------TCS-
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEEC--CCC------CCCcC-------CCcchhc-------c------Ccc-
Confidence 589999999999999999999 789999999 544 32221 1000000 0 000
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEEEEeC--CEEEE-cceeEEEEeCeEEEcCCCCCCCCC
Q psy7665 194 KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDK--HRVKF-AGEERTVSAQNFIIAVGGRPTYPD 267 (296)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~v~v-~g~~~~~~a~~vV~AtG~~p~~p~ 267 (296)
+. +.+...+...+++.+++++.+++...+. ..+.+ ++ ..+.+|+||+|||++|..|.
T Consensus 54 ----~~-----------~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g--~~i~~d~liiAtG~~~~~pg 113 (430)
T 3h28_A 54 ----KF-----------EDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSG--KKIEYDYLVIATGPKLVFGA 113 (430)
T ss_dssp ----CG-----------GGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTC--CEEECSEEEECCCCEEECCS
T ss_pred ----CH-----------HHHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCC--cEEECCEEEEcCCcccccCC
Confidence 00 0000111223445689998876655443 35666 44 56899999999999877663
No 113
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.99 E-value=7.3e-10 Score=103.58 Aligned_cols=32 Identities=25% Similarity=0.205 Sum_probs=30.7
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..+||+|||||++|+++|+.|++.|++|+|+|
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlE 137 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVE 137 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEE
Confidence 45899999999999999999999999999999
No 114
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.99 E-value=2.1e-09 Score=96.33 Aligned_cols=38 Identities=37% Similarity=0.629 Sum_probs=33.3
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHG 153 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g 153 (296)
..+||+|||||++|+++|+.|++.|.+|+|+| +....|
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E--~~~~~g 40 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIE--KRPEIG 40 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSSSTT
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEe--CCCCCC
Confidence 35799999999999999999999999999999 555333
No 115
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.98 E-value=3.8e-10 Score=105.51 Aligned_cols=61 Identities=39% Similarity=0.493 Sum_probs=42.2
Q ss_pred cceee-cCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHH
Q psy7665 3 LPKLG-GSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWI 63 (296)
Q Consensus 3 ~~~~~-~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~ 63 (296)
+|+|+ +++|++|||+|++|++|+|+|+.+++||+++++.++|.+++++|||++|.+.....
T Consensus 461 vKli~~~~~t~~ILGa~ivG~~A~ElI~~~alAi~~~~t~~dl~~~i~~HPTlsE~l~~~~~ 522 (542)
T 4b1b_A 461 AKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNCIGIHPTDAESFMNLFV 522 (542)
T ss_dssp EEEEEETTTTTBEEEEEEESTTHHHHHHHHHHHHHTCCBHHHHHHC----------------
T ss_pred EEEEEEeCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccCCcCCCHHHHHHHHHH
Confidence 56674 77899999999999999999999999999999999999999999999999876543
No 116
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.97 E-value=5.9e-10 Score=97.81 Aligned_cols=35 Identities=23% Similarity=0.505 Sum_probs=32.1
Q ss_pred ccccEEEECCChHHHHHHHHHHhC--CCcEEEEeccCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASM--NKKVALFDFVTPS 150 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE~~~~~ 150 (296)
..+||+|||||++|+.+|++|+++ |++|+|+| +..
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiE--k~~ 114 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVE--AGV 114 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEE--SSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEe--CCC
Confidence 468999999999999999999997 99999999 555
No 117
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.96 E-value=3.5e-09 Score=99.77 Aligned_cols=142 Identities=13% Similarity=0.010 Sum_probs=93.6
Q ss_pred CcceeecCCCCeEEEEEEEcCCh-hHHHHHHHHHHHcCCCHHHHccCcCCC-CChHHHH---HHH--------HHhhcCC
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNA-GEITQGYALGVMLGAYKQDFDALIGIH-PTCAEAI---SLS--------WIKGYNI 68 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a-~e~i~~~~~~~~~~~~k~~l~~~i~~~-pt~~e~l---~v~--------~~~~~~~ 68 (296)
.+|+|+|+++++|||+|++|++| +|+|+.++++|+++++.++|.++++.| |++++.. ... ......+
T Consensus 396 ~~k~v~~~~~~~ilG~~~~g~~a~~e~i~~~~~ai~~~~~~~~l~~~~~~~~P~~~~~~~~i~~aa~~~~~~~~~~~~~i 475 (565)
T 3ntd_A 396 SFKLLFDPVKGTIFGAQAVGKDGIDKRIDVMAVAQRAGMTVEQLQHLELSYAPPYGSAKDVINQAAFVASNIIKGDATPI 475 (565)
T ss_dssp EEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBHHHHTTCCCCCCTTTCCSSCHHHHHHHHHHHHHHTSCCEE
T ss_pred EEEEEEECCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCcccCchhhhhhhhhhhhhhcccccccee
Confidence 37999999999999999999999 999999999999999999999998644 8764322 111 1112346
Q ss_pred CCceeeccceeeeeeeccccCCccc--hhhh--ccCcceeeccccCCCCccccEEE-ECCChHHHHHHHHHHhCCCcEEE
Q psy7665 69 EPEVIKLHTPYLVLAKARFLLPTLE--CQEV--YHDGRFYDYLDNNFQTYDYDLCV-IGGGSGGISAAKEAASMNKKVAL 143 (296)
Q Consensus 69 ~~~~~~~~~p~~v~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~dVvV-IGgG~aG~~aA~~l~~~G~~V~i 143 (296)
+++.+....++.+++..+....... +++. -+...+.+.+..- +.+..|+| ..+|.-...+|..|.+.|++|..
T Consensus 476 ~~~~~~~~~~~~~~iDvR~~~e~~~~~i~ga~~ip~~~l~~~~~~~--~~~~~iv~~c~~g~rs~~a~~~l~~~G~~v~~ 553 (565)
T 3ntd_A 476 HFDQIDNLSEDQLLLDVRNPGELQNGGLEGAVNIPVDELRDRMHEL--PKDKEIIIFSQVGLRGNVAYRQLVNNGYRARN 553 (565)
T ss_dssp CTTTTTSCCTTEEEEECSCGGGGGGCCCTTCEECCGGGTTTSGGGS--CTTSEEEEECSSSHHHHHHHHHHHHTTCCEEE
T ss_pred eHHHHHhCCCCcEEEEeCCHHHHhcCCCCCcEECCHHHHHHHHhhc--CCcCeEEEEeCCchHHHHHHHHHHHcCCCEEE
Confidence 6666666566677777663211111 1110 0111111111111 12224444 47788888899999999999998
Q ss_pred Ee
Q psy7665 144 FD 145 (296)
Q Consensus 144 iE 145 (296)
++
T Consensus 554 l~ 555 (565)
T 3ntd_A 554 LI 555 (565)
T ss_dssp ET
T ss_pred Ec
Confidence 88
No 118
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.96 E-value=1.2e-09 Score=101.40 Aligned_cols=62 Identities=18% Similarity=0.095 Sum_probs=58.9
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWI 63 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~ 63 (296)
.+|+|+|++|++|||+|++|++|+|+|+.++++|+++.+.++|.+++++|||++|.+...+.
T Consensus 403 ~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~a~~ 464 (492)
T 3ic9_A 403 LLNVYADRTSGEFLGAEMFGPAAEHIGHLLAWARQQQMTVQAMLTMPFYHPVIEEGLRTALR 464 (492)
T ss_dssp EEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHTTSCCCTTCTHHHHHHHHH
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCChHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999987764
No 119
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.95 E-value=5.3e-10 Score=93.98 Aligned_cols=40 Identities=35% Similarity=0.624 Sum_probs=35.7
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCee
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTC 162 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~ 162 (296)
.+||+||||||+|++||+.|+++|++|+||| +.+ .+||.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~E--k~~------~~GG~~ 41 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFD--KSR------GSGGRM 41 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSS------SSCGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEE--CCC------CCCCcc
Confidence 4699999999999999999999999999999 666 667754
No 120
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.95 E-value=4.6e-09 Score=99.14 Aligned_cols=39 Identities=31% Similarity=0.479 Sum_probs=34.3
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGT 154 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~ 154 (296)
..+||+|||+|++|+++|+.|++.|.+|+|+| +.+..|.
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e--~~~~~~~ 163 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLE--KEPIPGG 163 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEEC--SSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEe--cCCCCCc
Confidence 46799999999999999999999999999999 5554443
No 121
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.95 E-value=2e-09 Score=101.93 Aligned_cols=33 Identities=30% Similarity=0.521 Sum_probs=31.2
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
..+||+|||||++|++||+.|++.|.+|+|+|+
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK 38 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSK 38 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEec
Confidence 468999999999999999999999999999993
No 122
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.94 E-value=5.6e-09 Score=93.39 Aligned_cols=34 Identities=29% Similarity=0.328 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCC
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPS 150 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~ 150 (296)
.+||+|||||++|+++|..|++.|.+|+|+| +.+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE--~~~ 44 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHE--KSS 44 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEC--SSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEe--cCC
Confidence 4799999999999999999999999999999 444
No 123
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.94 E-value=1.2e-09 Score=101.20 Aligned_cols=62 Identities=23% Similarity=0.296 Sum_probs=59.0
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWI 63 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~ 63 (296)
.+|+|+|++|++|||+|++|++|+|+|+.++++|+++++.++|.+++++|||++|.+...+.
T Consensus 421 ~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 482 (491)
T 3urh_A 421 FVKILADKETDRVLGGHIIGFGAGEMIHEIAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAAL 482 (491)
T ss_dssp EEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHH
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999987764
No 124
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.94 E-value=1.2e-09 Score=100.76 Aligned_cols=62 Identities=16% Similarity=0.289 Sum_probs=59.1
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWI 63 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~ 63 (296)
.+|+|+|++|++|||+|++|++|+|+|+.++++|+++++.++|.+++++|||++|.+...+.
T Consensus 401 ~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~~~ 462 (476)
T 3lad_A 401 FVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFAHPALSEALHEAAL 462 (476)
T ss_dssp EEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSCCCSSCSHHHHHHHHH
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCcHHHHhcCccCCCChHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999987765
No 125
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.92 E-value=1.2e-08 Score=93.64 Aligned_cols=134 Identities=16% Similarity=0.178 Sum_probs=83.8
Q ss_pred ccceeeeeeeccccCCccchhhhccC--cceeeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCC
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYHD--GRFYDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQH 152 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~ 152 (296)
.+.+|.+|+++|+.+..++....... ....+.+... ....+|+|||||++|+++|..|++.|.+|+++| +.+
T Consensus 127 ~~~~d~lviAtG~~p~~~~~~g~~~~~v~~~~~~~~~~--~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~--~~~-- 200 (455)
T 2yqu_A 127 ELEARYILIATGSAPLIPPWAQVDYERVVTSTEALSFP--EVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLE--YMD-- 200 (455)
T ss_dssp EEEEEEEEECCCEEECCCTTBCCCSSSEECHHHHTCCS--SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEC--SSS--
T ss_pred EEEecEEEECCCCCCCCCCCCCCCcCcEechHHhhccc--cCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEe--cCC--
Confidence 46789999999986655544332221 1112222211 123589999999999999999999999999999 433
Q ss_pred CcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcce
Q psy7665 153 GTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK 232 (296)
Q Consensus 153 g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 232 (296)
.+. | ..+ ..+...+.+.+++.|++++.+.
T Consensus 201 ----~~l---------~--------------------------~~~------------~~~~~~l~~~l~~~Gv~i~~~~ 229 (455)
T 2yqu_A 201 ----RIL---------P--------------------------TMD------------LEVSRAAERVFKKQGLTIRTGV 229 (455)
T ss_dssp ----SSC---------T--------------------------TSC------------HHHHHHHHHHHHHHTCEEECSC
T ss_pred ----ccc---------c--------------------------ccC------------HHHHHHHHHHHHHCCCEEEECC
Confidence 100 0 000 1112223445566799998763
Q ss_pred E-EEE--eCCEEEE---cceeEEEEeCeEEEcCCCCCCCCC
Q psy7665 233 A-VFV--DKHRVKF---AGEERTVSAQNFIIAVGGRPTYPD 267 (296)
Q Consensus 233 ~-~~~--~~~~v~v---~g~~~~~~a~~vV~AtG~~p~~p~ 267 (296)
. ... +...+.+ ++ .++.+|.||+|+|.+|+.+.
T Consensus 230 ~V~~i~~~~~~v~v~~~~g--~~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 230 RVTAVVPEAKGARVELEGG--EVLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp CEEEEEEETTEEEEEETTS--CEEEESEEEECSCEEECCTT
T ss_pred EEEEEEEeCCEEEEEECCC--eEEEcCEEEECcCCCcCCCC
Confidence 2 222 3334444 34 57899999999999887643
No 126
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.92 E-value=9.7e-10 Score=101.12 Aligned_cols=60 Identities=27% Similarity=0.413 Sum_probs=56.7
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLS 61 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~ 61 (296)
.+|+|+|++|++|||+|++|++|+|+|+.++++|+++++.++|.+++++|||++|.+...
T Consensus 390 ~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~ 449 (463)
T 4dna_A 390 IMKLVVNAADRKVVGAHILGHDAGEMAQLLGISLRAGCTKDDFDRTMAVHPTAAEELVTM 449 (463)
T ss_dssp EEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSGGGGTCC
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999987544
No 127
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.91 E-value=1.3e-09 Score=100.86 Aligned_cols=60 Identities=32% Similarity=0.480 Sum_probs=56.4
Q ss_pred Ccceeec-CCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHH
Q psy7665 2 SLPKLGG-SEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLS 61 (296)
Q Consensus 2 ~~~~~~~-~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~ 61 (296)
.+|+|+| ++|++|||+|++|++|+|+|+.++++|+++++.++|.+++++|||++|.+...
T Consensus 414 ~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~ 474 (488)
T 3dgz_A 414 YIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKL 474 (488)
T ss_dssp EEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSTHHHHTC
T ss_pred EEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHH
Confidence 4789999 58999999999999999999999999999999999999999999999988654
No 128
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.91 E-value=1e-09 Score=101.28 Aligned_cols=58 Identities=28% Similarity=0.503 Sum_probs=55.1
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAIS 59 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~ 59 (296)
.+|+|+|++|++|||+|++|++|+|+|+.++++|+++++.++|.+++++|||++|.+.
T Consensus 418 ~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~ 475 (478)
T 3dk9_A 418 VMKMVCANKEEKVVGIHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEELV 475 (478)
T ss_dssp EEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSGGGGG
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999763
No 129
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.91 E-value=8.2e-08 Score=85.37 Aligned_cols=34 Identities=24% Similarity=0.373 Sum_probs=30.7
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPS 150 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~ 150 (296)
..+||+|||||.+|+++|++|+ +|++|+|+| +.+
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE--~~~ 41 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLE--REA 41 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEEC--SSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEE--CCC
Confidence 4679999999999999999999 699999999 544
No 130
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.90 E-value=1.1e-09 Score=101.23 Aligned_cols=59 Identities=25% Similarity=0.318 Sum_probs=55.6
Q ss_pred CcceeecCC-CCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHH
Q psy7665 2 SLPKLGGSE-VSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISL 60 (296)
Q Consensus 2 ~~~~~~~~~-~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v 60 (296)
.+|+|+|++ |++|||+|++|++|+|+|+.++++|+++++.++|.+++++|||++|.+..
T Consensus 414 ~~k~i~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~ 473 (483)
T 3dgh_A 414 YLKAVAERHGDQRVYGLHYIGPVAGEVIQGFAAALKSGLTINTLINTVGIHPTTAEEFTR 473 (483)
T ss_dssp EEEEEEESSTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGGG
T ss_pred EEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHH
Confidence 478999987 89999999999999999999999999999999999999999999997754
No 131
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.90 E-value=3.7e-08 Score=94.23 Aligned_cols=33 Identities=27% Similarity=0.376 Sum_probs=31.0
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
..+||||||||.+|++||++|++.|.+|+|+|+
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK 36 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSL 36 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEec
Confidence 457999999999999999999999999999994
No 132
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.89 E-value=4e-09 Score=100.06 Aligned_cols=33 Identities=39% Similarity=0.650 Sum_probs=30.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCC--CcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMN--KKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G--~~V~iiE~ 146 (296)
..+||+|||||++|+++|+.|++.| .+|+|+|+
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk 38 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISK 38 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEES
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeC
Confidence 4579999999999999999999999 99999994
No 133
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.89 E-value=2.3e-10 Score=106.18 Aligned_cols=135 Identities=19% Similarity=0.240 Sum_probs=72.4
Q ss_pred ccccEEEECCChHHHHHHHHHHhC--CCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASM--NKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGF 191 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~ 191 (296)
..+||+|||||++|++||..|++. |.+|+||| +.+ ..+ +..|.+++.+...... .........++
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie--~~~------~~~----y~r~~lsk~l~~~~~~-~~~~~~~~~~~ 76 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVS--EDP------ELP----YMRPPLSKELWFSDDP-NVTKTLRFKQW 76 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEE--SSS------SCC----BCSGGGGTGGGCC--C-THHHHCEEECT
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEe--CCC------CCC----CCCCCCCHHhhcCCcc-chhhccccccc
Confidence 457999999999999999999887 88999999 444 222 1122233322221110 00001111122
Q ss_pred cccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcc-eEEEEe--CCEEEE-cceeEEEEeCeEEEcCCCCCCCC
Q psy7665 192 HMKK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNA-KAVFVD--KHRVKF-AGEERTVSAQNFIIAVGGRPTYP 266 (296)
Q Consensus 192 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~--~~~v~v-~g~~~~~~a~~vV~AtG~~p~~p 266 (296)
+... .+.+.....+. . .+.+ ..+.+.+++++.+ .+..++ .+.|++ +| .++.||+||+|||++|+.|
T Consensus 77 ~~~~~~~~~~~~~~~~-~-~~~l-----~~~~~~gv~~~~g~~v~~id~~~~~V~~~~g--~~i~yd~lviATGs~p~~~ 147 (493)
T 1m6i_A 77 NGKERSIYFQPPSFYV-S-AQDL-----PHIENGGVAVLTGKKVVQLDVRDNMVKLNDG--SQITYEKCLIATGGTPRSL 147 (493)
T ss_dssp TSCEEESBSSCGGGSB-C-TTTT-----TTSTTCEEEEEETCCEEEEEGGGTEEEETTS--CEEEEEEEEECCCEEECCC
T ss_pred ccccccccccchHhhc-c-hhhh-----hhhhcCCeEEEcCCEEEEEECCCCEEEECCC--CEEECCEEEECCCCCCCCC
Confidence 1100 00000000000 0 0000 0112458888876 443333 467777 55 5789999999999999888
Q ss_pred CCCC
Q psy7665 267 DIPG 270 (296)
Q Consensus 267 ~i~G 270 (296)
+++|
T Consensus 148 ~~~~ 151 (493)
T 1m6i_A 148 SAID 151 (493)
T ss_dssp HHHH
T ss_pred CCcc
Confidence 7665
No 134
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.89 E-value=2.4e-09 Score=98.55 Aligned_cols=64 Identities=19% Similarity=0.157 Sum_probs=59.9
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHHhh
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWIKG 65 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~~~ 65 (296)
.+|+|+|++|++|||+|++|++|+|+|+.++++|+++++.++|.+++++|||++|.+...+...
T Consensus 394 ~~k~i~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~~~~~~ 457 (466)
T 3l8k_A 394 VLKLIFERGSMRLIGAWMIGVHSQYLINELGLAVAYGLNAKQLASFAEQHPSTNEIISYTARKV 457 (466)
T ss_dssp EEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHCCCCTTSTTHHHHHHHHHH
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCcCCHHHHhccccCCCChHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999998776543
No 135
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.89 E-value=1.9e-08 Score=96.81 Aligned_cols=31 Identities=19% Similarity=0.277 Sum_probs=30.1
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+||+|||||++|+++|++|+++|.+|+|+|
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlE 302 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYC 302 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence 3799999999999999999999999999999
No 136
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.89 E-value=1.5e-08 Score=92.95 Aligned_cols=32 Identities=41% Similarity=0.591 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
.+||+|||||++|+++|..|++.|.+|+|+|+
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~ 37 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDS 37 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 57999999999999999999999999999993
No 137
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.89 E-value=1.4e-08 Score=90.62 Aligned_cols=34 Identities=41% Similarity=0.528 Sum_probs=31.9
Q ss_pred CCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 112 QTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 112 ~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..+||+|||||++|+++|++|+++|.+|+|+|
T Consensus 14 ~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE 47 (382)
T 1ryi_A 14 MKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFE 47 (382)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEe
Confidence 3466899999999999999999999999999999
No 138
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.87 E-value=3e-09 Score=100.74 Aligned_cols=138 Identities=14% Similarity=0.040 Sum_probs=88.3
Q ss_pred CcceeecCCCCeEEEEEEEcC-ChhHHHHHHHHHHHcCCCHHHHccCcCCC-CChHHHH---HHH------HH--hhcCC
Q psy7665 2 SLPKLGGSEVSTFITAEISSN-NAGEITQGYALGVMLGAYKQDFDALIGIH-PTCAEAI---SLS------WI--KGYNI 68 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~-~a~e~i~~~~~~~~~~~~k~~l~~~i~~~-pt~~e~l---~v~------~~--~~~~~ 68 (296)
.+|+|+|++|++|||+|++|+ .++|+|+.++++|++++++++|.++++.| |++++.. ... .. ....+
T Consensus 412 ~~k~i~~~~~~~ilG~~~~g~~~~~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~d~i~~aa~~a~n~~~~~~~~i 491 (588)
T 3ics_A 412 LIKLIFNKDSGKIYGAQTLGRDGVDKRMDVIATAIKANLTVLDLPDLELSYAPPYSSAKDPVNMVGYAASNIVDGFVDTV 491 (588)
T ss_dssp EEEEEECTTTCBEEEEEEEESSSHHHHHHHHHHHHHTTCBTTTGGGCCCCCSTTTCCSSCHHHHHHHHHHHHHTTSCCEE
T ss_pred EEEEEEECCCCeEEEEEEEcCCcHHHHHHHHHHHHHcCCCHHHhhhhhhccCCCcccccchhhhccccccccccccccee
Confidence 479999999999999999998 48999999999999999999999999988 8764321 101 11 11234
Q ss_pred CCceeecc-ceeeeeeeccc--------cCCccchhhhccCcceeeccccCCCCccccEE-EECCChHHHHHHHHHHhCC
Q psy7665 69 EPEVIKLH-TPYLVLAKARF--------LLPTLECQEVYHDGRFYDYLDNNFQTYDYDLC-VIGGGSGGISAAKEAASMN 138 (296)
Q Consensus 69 ~~~~~~~~-~p~~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVv-VIGgG~aG~~aA~~l~~~G 138 (296)
+++.+... ..+.+++..+. +++....+. ..+.+.+..- +.+..|+ +...|.-...+|..|.+.|
T Consensus 492 ~~~~~~~~~~~~~~~iDvR~~~e~~~ghi~ga~~ip~----~~l~~~~~~l--~~~~~iv~~C~~g~rs~~a~~~l~~~G 565 (588)
T 3ics_A 492 QWHEIDRIVENGGYLIDVREPNELKQGMIKGSINIPL----DELRDRLEEV--PVDKDIYITCQLGMRGYVAARMLMEKG 565 (588)
T ss_dssp CTTTHHHHHHTTCEEEECSCGGGGGGCBCTTEEECCH----HHHTTCGGGS--CSSSCEEEECSSSHHHHHHHHHHHHTT
T ss_pred cHHHHHHHhcCCCEEEEcCCHHHHhcCCCCCCEECCH----HHHHHHHhhC--CCCCeEEEECCCCcHHHHHHHHHHHcC
Confidence 44444322 23456666552 222111111 1111111111 1222344 4467888888999999999
Q ss_pred CcEEEEe
Q psy7665 139 KKVALFD 145 (296)
Q Consensus 139 ~~V~iiE 145 (296)
++|..++
T Consensus 566 ~~v~~l~ 572 (588)
T 3ics_A 566 YKVKNVD 572 (588)
T ss_dssp CCEEEET
T ss_pred CcEEEEc
Confidence 9977777
No 139
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.87 E-value=6e-09 Score=92.97 Aligned_cols=158 Identities=14% Similarity=0.068 Sum_probs=96.1
Q ss_pred CCCChHHHHHHHHHhhcCCC---Cc--ee----eccceeeeeeeccccCCccchhhhccCc---ceeeccccCCC-Cccc
Q psy7665 50 IHPTCAEAISLSWIKGYNIE---PE--VI----KLHTPYLVLAKARFLLPTLECQEVYHDG---RFYDYLDNNFQ-TYDY 116 (296)
Q Consensus 50 ~~pt~~e~l~v~~~~~~~~~---~~--~~----~~~~p~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~ 116 (296)
....+.+..++.++++++++ ++ .+ ..+.+|.+++|+|+.+..++.++.+... ...+...-... ....
T Consensus 65 ~~~~~~~~~~v~~~~g~~v~~id~~~~~V~~~g~~~~~d~lViATGs~p~~p~i~G~~~v~~~~~~~~~~~l~~~~~~~~ 144 (367)
T 1xhc_A 65 YSLDWYRKRGIEIRLAEEAKLIDRGRKVVITEKGEVPYDTLVLATGARAREPQIKGKEYLLTLRTIFDADRIKESIENSG 144 (367)
T ss_dssp SCHHHHHHHTEEEECSCCEEEEETTTTEEEESSCEEECSEEEECCCEEECCCCSBTGGGEECCCSHHHHHHHHHHHHHHS
T ss_pred CCHHHHHhCCcEEEECCEEEEEECCCCEEEECCcEEECCEEEECCCCCCCCCCCCCcCCEEEEcCHHHHHHHHHHhhcCC
Confidence 33444455566666654432 11 11 2467899999999876655544422111 11111110000 0124
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCcccccc
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKS 196 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~ 196 (296)
+++|||||+.|+++|..|++.|.+|+++| +.+ .+.. +
T Consensus 145 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~--~~~------~~l~------------------------------~----- 181 (367)
T 1xhc_A 145 EAIIIGGGFIGLELAGNLAEAGYHVKLIH--RGA------MFLG------------------------------L----- 181 (367)
T ss_dssp EEEEEECSHHHHHHHHHHHHTTCEEEEEC--SSS------CCTT------------------------------C-----
T ss_pred cEEEECCCHHHHHHHHHHHhCCCEEEEEe--CCC------eecc------------------------------C-----
Confidence 89999999999999999999999999999 443 1000 0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceE-EEEeCCEEEEcceeEEEEeCeEEEcCCCCCCC
Q psy7665 197 FTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKA-VFVDKHRVKFAGEERTVSAQNFIIAVGGRPTY 265 (296)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~v~v~g~~~~~~a~~vV~AtG~~p~~ 265 (296)
+ ..+...+.+.+++.|++++.+.. .......+.++++ . +.+|.||+|+|.+|+.
T Consensus 182 -~------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g-~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 182 -D------------EELSNMIKDMLEETGVKFFLNSELLEANEEGVLTNSG-F-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp -C------------HHHHHHHHHHHHHTTEEEECSCCEEEECSSEEEETTE-E-EECSCEEEECCEEECC
T ss_pred -C------------HHHHHHHHHHHHHCCCEEEcCCEEEEEEeeEEEECCC-E-EEcCEEEECcCCCcCH
Confidence 0 11223345567778999987643 3344556767432 4 9999999999988765
No 140
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.87 E-value=2.5e-08 Score=91.70 Aligned_cols=134 Identities=15% Similarity=0.074 Sum_probs=84.7
Q ss_pred ccceeeeeeeccccCCccchhhhccCcceeeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCc
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYHDGRFYDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGT 154 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~ 154 (296)
.+.+|.+++++|+.+..++.++.+......+.+... ....+|+|||||..|+++|..|++.|.+|+++| +.+
T Consensus 128 ~~~~d~lviAtGs~p~~p~i~G~~~~~~~~~~~~~~--~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~--~~~---- 199 (463)
T 2r9z_A 128 RLSADHIVIATGGRPIVPRLPGAELGITSDGFFALQ--QQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVA--LED---- 199 (463)
T ss_dssp EEEEEEEEECCCEEECCCSCTTGGGSBCHHHHHHCS--SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEC--SSS----
T ss_pred EEEcCEEEECCCCCCCCCCCCCccceecHHHHhhhh--ccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEE--cCC----
Confidence 367899999999876655544432222222222211 123489999999999999999999999999999 443
Q ss_pred ccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceE-
Q psy7665 155 VWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKA- 233 (296)
Q Consensus 155 ~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 233 (296)
.+.. .++ ..+...+...+++.|++++.+..
T Consensus 200 --~~l~-----------------------------------~~~------------~~~~~~l~~~l~~~gv~i~~~~~v 230 (463)
T 2r9z_A 200 --RLLF-----------------------------------QFD------------PLLSATLAENMHAQGIETHLEFAV 230 (463)
T ss_dssp --SSST-----------------------------------TSC------------HHHHHHHHHHHHHTTCEEESSCCE
T ss_pred --cccc-----------------------------------ccC------------HHHHHHHHHHHHHCCCEEEeCCEE
Confidence 1000 001 01112234556778999987642
Q ss_pred EEE--eCC--EEEE-cceeEEEEeCeEEEcCCCCCCCC
Q psy7665 234 VFV--DKH--RVKF-AGEERTVSAQNFIIAVGGRPTYP 266 (296)
Q Consensus 234 ~~~--~~~--~v~v-~g~~~~~~a~~vV~AtG~~p~~p 266 (296)
..+ +.. .+++ +|+. ++.+|.||+|+|.+|+..
T Consensus 231 ~~i~~~~~~~~v~~~~G~~-~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 231 AALERDAQGTTLVAQDGTR-LEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp EEEEEETTEEEEEETTCCE-EEEESEEEECSCEEESCT
T ss_pred EEEEEeCCeEEEEEeCCcE-EEEcCEEEECCCCCcCCC
Confidence 222 222 3444 5522 789999999999988764
No 141
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.87 E-value=4.5e-08 Score=87.31 Aligned_cols=32 Identities=31% Similarity=0.540 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
.+||+|||||++|+++|++|+++|.+|+|+|+
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~ 36 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTVIEK 36 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 57999999999999999999999999999993
No 142
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.86 E-value=6.1e-08 Score=90.22 Aligned_cols=33 Identities=39% Similarity=0.564 Sum_probs=31.1
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
..+||+|||||++|+++|+.|++.|++|+|+|+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~ 38 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLER 38 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEcc
Confidence 458999999999999999999999999999993
No 143
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.86 E-value=4.2e-10 Score=109.18 Aligned_cols=80 Identities=8% Similarity=-0.042 Sum_probs=54.7
Q ss_pred hcCCCCceeeccceeeeeeeccccC--------Cccchhhhc----cCcceeeccccCCCCccccEEEEC--CChHHHHH
Q psy7665 65 GYNIEPEVIKLHTPYLVLAKARFLL--------PTLECQEVY----HDGRFYDYLDNNFQTYDYDLCVIG--GGSGGISA 130 (296)
Q Consensus 65 ~~~~~~~~~~~~~p~~v~~~~~~~~--------~~~~~~~~~----~~~~~~~~~~~~~~~~~~dVvVIG--gG~aG~~a 130 (296)
++.++.+....+.+|.+|+++|..+ ..+++++.. ......+.+... ...+.+|+||| ||..|+++
T Consensus 467 ~~~v~~~~~~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~~~-~~~gk~VvVIG~GgG~~g~e~ 545 (729)
T 1o94_A 467 QKPMTADDVLQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMDGK-KKIGKRVVILNADTYFMAPSL 545 (729)
T ss_dssp CCCCCHHHHHTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHHCC-SCCCSEEEEEECCCSSHHHHH
T ss_pred CeEEehhhccccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHhcCC-CCCCCeEEEEcCCCCchHHHH
Confidence 4445555556688999999999873 223333322 111222333322 22345899999 99999999
Q ss_pred HHHHHhCCCcEEEEe
Q psy7665 131 AKEAASMNKKVALFD 145 (296)
Q Consensus 131 A~~l~~~G~~V~iiE 145 (296)
|..|++.|.+|++++
T Consensus 546 A~~l~~~G~~Vtlv~ 560 (729)
T 1o94_A 546 AEKLATAGHEVTIVS 560 (729)
T ss_dssp HHHHHHTTCEEEEEE
T ss_pred HHHHHHcCCEEEEEe
Confidence 999999999999999
No 144
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.86 E-value=4.2e-08 Score=92.75 Aligned_cols=32 Identities=22% Similarity=0.501 Sum_probs=30.6
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..+||+|||||++|+++|+.|++.|.+|+|+|
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiE 53 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYE 53 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEc
Confidence 35799999999999999999999999999999
No 145
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.86 E-value=1.8e-08 Score=90.45 Aligned_cols=31 Identities=13% Similarity=0.327 Sum_probs=29.9
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+||+|||||++|+++|..|++.|.+|+|+|
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E 32 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILE 32 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEEC
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 4699999999999999999999999999999
No 146
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.86 E-value=2.1e-08 Score=87.83 Aligned_cols=33 Identities=33% Similarity=0.588 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCC
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPS 150 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~ 150 (296)
+||+|||||++|+++|+.|++.|.+|+|+| +.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE--~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFD--KSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEE--CCC
Confidence 599999999999999999999999999999 555
No 147
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.86 E-value=3.8e-08 Score=87.40 Aligned_cols=31 Identities=39% Similarity=0.530 Sum_probs=30.0
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+||+|||||++|+++|++|+++|.+|+|+|
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle 32 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTD 32 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence 4799999999999999999999999999999
No 148
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.86 E-value=1.2e-08 Score=97.62 Aligned_cols=33 Identities=39% Similarity=0.519 Sum_probs=31.0
Q ss_pred ccccEEEECCChHHHHHHHHHHhC------CCcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASM------NKKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~------G~~V~iiE~ 146 (296)
..+||||||||++||.||+.|++. |.+|+|+|+
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK 59 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDK 59 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEe
Confidence 568999999999999999999998 999999994
No 149
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.85 E-value=2.2e-08 Score=89.92 Aligned_cols=31 Identities=32% Similarity=0.681 Sum_probs=30.1
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+||+|||||++|+++|++|+++|.+|+|+|
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE 34 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLE 34 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence 4799999999999999999999999999999
No 150
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.85 E-value=5.4e-08 Score=91.04 Aligned_cols=32 Identities=31% Similarity=0.486 Sum_probs=30.6
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..+||+|||||++|+++|+.|++.|.+|+|||
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viE 35 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVE 35 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEe
Confidence 45799999999999999999999999999999
No 151
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.85 E-value=2.9e-10 Score=109.34 Aligned_cols=86 Identities=12% Similarity=0.142 Sum_probs=57.1
Q ss_pred HHHHHHHHHhhcCCCCceeeccceeeeeeeccccCCccchhhhccC--cceeeccccCCCCccccEEEECCChHHHHHHH
Q psy7665 55 AEAISLSWIKGYNIEPEVIKLHTPYLVLAKARFLLPTLECQEVYHD--GRFYDYLDNNFQTYDYDLCVIGGGSGGISAAK 132 (296)
Q Consensus 55 ~e~l~v~~~~~~~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~dVvVIGgG~aG~~aA~ 132 (296)
.+..++.+++++.++.+.+. .+|.+++++|+.+..++.++.... ....+.+... .....+|+|||||+.|+++|.
T Consensus 435 ~~~~gv~~~~~~~v~~~~~~--~~d~lviAtG~~p~~~~i~G~~~~~v~~~~~~l~~~-~~~~~~VvVIGgG~~g~E~A~ 511 (671)
T 1ps9_A 435 IEVTGVTLKLNHTVTADQLQ--AFDETILASGIVPRTPPIDGIDHPKVLSYLDVLRDK-APVGNKVAIIGCGGIGFDTAM 511 (671)
T ss_dssp HHHHTCEEEESCCCCSSSSC--CSSEEEECCCEEECCCCCBTTTSTTEEEHHHHHTSC-CCCCSEEEEECCHHHHHHHHH
T ss_pred HHHcCCEEEeCcEecHHHhh--cCCEEEEccCCCcCCCCCCCCCCCcEeeHHHHhhCC-CCCCCeEEEECCChhHHHHHH
Confidence 34455666677777765432 789999999987665554443321 1122333322 123468999999999999999
Q ss_pred HHHhCCCcEEE
Q psy7665 133 EAASMNKKVAL 143 (296)
Q Consensus 133 ~l~~~G~~V~i 143 (296)
.|++.|.+|++
T Consensus 512 ~l~~~G~~vtv 522 (671)
T 1ps9_A 512 YLSQPGESTSQ 522 (671)
T ss_dssp HHTCCSSCGGG
T ss_pred HHHhcCCCccc
Confidence 99999876553
No 152
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.84 E-value=1.4e-08 Score=91.68 Aligned_cols=32 Identities=28% Similarity=0.421 Sum_probs=30.4
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..+||+|||||++|+++|+.|++.|.+|+|+|
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E 53 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYE 53 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEe
Confidence 56899999999999999999999999999999
No 153
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.84 E-value=5.9e-08 Score=93.59 Aligned_cols=32 Identities=25% Similarity=0.265 Sum_probs=30.6
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..+||+|||||.+|+++|++|+++|.+|+|+|
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlE 294 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYC 294 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEe
Confidence 34799999999999999999999999999999
No 154
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.84 E-value=8.8e-09 Score=95.65 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=31.4
Q ss_pred CccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 113 TYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 113 ~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..+||+||||||+|+++|..|++.|.+|+|||
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE 41 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLE 41 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEe
Confidence 356899999999999999999999999999999
No 155
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.84 E-value=5.4e-08 Score=88.58 Aligned_cols=35 Identities=26% Similarity=0.332 Sum_probs=31.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC-cEEEEeccCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK-KVALFDFVTPS 150 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE~~~~~ 150 (296)
..+||+|||||++|+++|++|+++|+ +|+|+| +..
T Consensus 5 ~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE--~~~ 40 (438)
T 3dje_A 5 KSSSLLIVGAGTWGTSTALHLARRGYTNVTVLD--PYP 40 (438)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEE--SSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEe--CCC
Confidence 35799999999999999999999999 999999 444
No 156
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.84 E-value=2.5e-09 Score=98.97 Aligned_cols=60 Identities=25% Similarity=0.306 Sum_probs=56.6
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLS 61 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~ 61 (296)
.+|+|+|++|++|||+|++|++|+|+|+.++++|+++++.++|.+++++|||++|.+...
T Consensus 410 ~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~ 469 (484)
T 3o0h_A 410 FMKLVVDGESRIVVGAHVLGENAGEIAQLIGISLKGKLTKDIFDKTMAVHPTMSEELVTM 469 (484)
T ss_dssp EEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGCC
T ss_pred EEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999987544
No 157
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.83 E-value=1.9e-08 Score=90.47 Aligned_cols=33 Identities=30% Similarity=0.520 Sum_probs=31.1
Q ss_pred ccccEEEECCChHHHHHHHHHHh-CC-CcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAAS-MN-KKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~-~G-~~V~iiE~ 146 (296)
..+||+|||||++|+++|++|++ +| .+|+|+|+
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~ 54 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEK 54 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 56899999999999999999999 99 99999993
No 158
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.83 E-value=2.6e-09 Score=99.74 Aligned_cols=60 Identities=32% Similarity=0.532 Sum_probs=55.8
Q ss_pred CcceeecC-CCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHH
Q psy7665 2 SLPKLGGS-EVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLS 61 (296)
Q Consensus 2 ~~~~~~~~-~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~ 61 (296)
.+|+|+|+ +|++|||+|++|++|+|+|+.++++|+++++.++|.+++++|||++|.+...
T Consensus 442 ~~Kli~~~~~~~~ilGa~i~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~hPt~~E~~~~~ 502 (519)
T 3qfa_A 442 YAKIICNTKDNERVVGFHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTL 502 (519)
T ss_dssp EEEEEEETTTTCEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCTTCGGGGGGGC
T ss_pred EEEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhccccCCCChHHHHHHH
Confidence 47899997 5899999999999999999999999999999999999999999999987544
No 159
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.83 E-value=3.4e-08 Score=93.06 Aligned_cols=32 Identities=25% Similarity=0.402 Sum_probs=28.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+.+||+|||||++|+++|+.|++.|.+|+|||
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlE 79 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLE 79 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEB
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEc
Confidence 46899999999999999999999999999999
No 160
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.82 E-value=2.1e-09 Score=94.27 Aligned_cols=50 Identities=28% Similarity=0.345 Sum_probs=42.5
Q ss_pred ccccEEEECCChHHHHHHHHHHh--CCCcEEEEeccCCCCCCcccccCCeeeccCCCchh
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAAS--MNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKK 171 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~--~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~ 171 (296)
.++||+||||||+|++||++|++ .|++|+||| +.+ .+||.+.+.++.+++
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viE--k~~------~~GG~~~~~~~~~~~ 115 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE--SSV------APGGGSWLGGQLFSA 115 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEEC--SSS------SCCTTTTCCSTTCCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEE--CCC------CCCceEEeCCccCCH
Confidence 56899999999999999999975 599999999 666 788888777776543
No 161
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.82 E-value=1.5e-08 Score=92.49 Aligned_cols=130 Identities=14% Similarity=0.187 Sum_probs=85.5
Q ss_pred cceeeeeeeccccCCccchhhhc--cCccee------eccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEecc
Q psy7665 76 HTPYLVLAKARFLLPTLECQEVY--HDGRFY------DYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFV 147 (296)
Q Consensus 76 ~~p~~v~~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~ 147 (296)
..+|.+|+|+|+.+..++..... ...... ..+... ...+++|||||+.|+++|..+++.|.+|+++|
T Consensus 103 ~~yd~lVIATGs~p~~p~i~g~~~~~~~~~~~~~~l~~~~~~~---~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~-- 177 (437)
T 4eqs_A 103 ESYDKLILSPGASANSLGFESDITFTLRNLEDTDAIDQFIKAN---QVDKVLVVGAGYVSLEVLENLYERGLHPTLIH-- 177 (437)
T ss_dssp EECSEEEECCCEEECCCCCCCTTEECCSSHHHHHHHHHHHHHH---TCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE--
T ss_pred EEcCEEEECCCCccccccccCceEEeeccHHHHHHHHHhhhcc---CCcEEEEECCccchhhhHHHHHhcCCcceeee--
Confidence 56789999999876655443211 111111 111110 13479999999999999999999999999999
Q ss_pred CCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcE
Q psy7665 148 TPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKID 227 (296)
Q Consensus 148 ~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 227 (296)
+.+ .+.. ..+ ..+...+...+++.||+
T Consensus 178 ~~~------~ll~-----------------------------------~~d------------~~~~~~~~~~l~~~gV~ 204 (437)
T 4eqs_A 178 RSD------KINK-----------------------------------LMD------------ADMNQPILDELDKREIP 204 (437)
T ss_dssp SSS------CCST-----------------------------------TSC------------GGGGHHHHHHHHHTTCC
T ss_pred eec------cccc-----------------------------------ccc------------chhHHHHHHHhhccceE
Confidence 443 1100 000 11123345667788999
Q ss_pred EEcceE-EEEeCCEEEE-cceeEEEEeCeEEEcCCCCCCC
Q psy7665 228 YFNAKA-VFVDKHRVKF-AGEERTVSAQNFIIAVGGRPTY 265 (296)
Q Consensus 228 ~~~~~~-~~~~~~~v~v-~g~~~~~~a~~vV~AtG~~p~~ 265 (296)
++.+.. ...+...+.+ ++ +.+.+|.|++|+|.+|+.
T Consensus 205 i~~~~~v~~~~~~~v~~~~g--~~~~~D~vl~a~G~~Pn~ 242 (437)
T 4eqs_A 205 YRLNEEINAINGNEITFKSG--KVEHYDMIIEGVGTHPNS 242 (437)
T ss_dssp EEESCCEEEEETTEEEETTS--CEEECSEEEECCCEEESC
T ss_pred EEeccEEEEecCCeeeecCC--eEEeeeeEEEEeceecCc
Confidence 987643 4456677777 56 678999999999988764
No 162
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.81 E-value=2.3e-08 Score=94.52 Aligned_cols=40 Identities=25% Similarity=0.544 Sum_probs=34.6
Q ss_pred CccccEEEECCChHHHHHHHHHHhC------CCcEEEEeccCCCCCCc
Q psy7665 113 TYDYDLCVIGGGSGGISAAKEAASM------NKKVALFDFVTPSQHGT 154 (296)
Q Consensus 113 ~~~~dVvVIGgG~aG~~aA~~l~~~------G~~V~iiE~~~~~~~g~ 154 (296)
.+.+||+|||||++|+++|+.|++. |.+|+||| +...+|.
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlE--k~~~~g~ 78 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVE--KAAHIGA 78 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEEC--SSSSTTT
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEe--CCCCCCC
Confidence 3568999999999999999999999 99999999 5554443
No 163
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.81 E-value=1.1e-07 Score=86.00 Aligned_cols=33 Identities=27% Similarity=0.503 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCC
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPS 150 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~ 150 (296)
+||+|||||.+|++||++|+++|++|+|+| +.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE--~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFE--RLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEEC--SSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEe--CCC
Confidence 489999999999999999999999999999 666
No 164
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.80 E-value=6.8e-09 Score=92.00 Aligned_cols=53 Identities=21% Similarity=0.210 Sum_probs=40.1
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCch
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPK 170 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~ 170 (296)
+||+|||||++|+++|.+|++.|.+|+|+| +....++-....+.+.+..|.|+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE--~~~~~~tp~h~~d~i~eL~CnpS 54 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFE--MRPKRMTPAHGTDRFAEIVCSNS 54 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEC--CTTTSCCSSCCSSCTTCCCSCCE
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEe--ccCCcCCccccCCCccccccCcC
Confidence 589999999999999999999999999999 54433332233445555566664
No 165
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.79 E-value=2.4e-07 Score=82.72 Aligned_cols=31 Identities=35% Similarity=0.563 Sum_probs=30.1
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+||+|||||++|+++|++|+++|++|+|+|
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie 33 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVD 33 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEe
Confidence 5799999999999999999999999999999
No 166
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.78 E-value=1.9e-08 Score=86.29 Aligned_cols=127 Identities=12% Similarity=0.047 Sum_probs=80.6
Q ss_pred ccceeeeeeeccccCCccchhhhcc---CcceeeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCC
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYH---DGRFYDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQ 151 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~ 151 (296)
.+.+|.+|+++|..+..+..++... .................+|+|||+|+.|+++|..|++.| +|++++ +..
T Consensus 98 ~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~--~~~- 173 (297)
T 3fbs_A 98 RETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFT--NGI- 173 (297)
T ss_dssp EEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEEC--TTT-
T ss_pred EEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEE--CCC-
Confidence 3678899999997654433333221 110100000011113458999999999999999999999 999999 332
Q ss_pred CCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcc
Q psy7665 152 HGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNA 231 (296)
Q Consensus 152 ~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 231 (296)
. .+...+...+++.||+++..
T Consensus 174 -----~------------------------------------------------------~~~~~~~~~l~~~gv~i~~~ 194 (297)
T 3fbs_A 174 -----V------------------------------------------------------EPDADQHALLAARGVRVETT 194 (297)
T ss_dssp -----C------------------------------------------------------CCCHHHHHHHHHTTCEEECS
T ss_pred -----C------------------------------------------------------CCCHHHHHHHHHCCcEEEcc
Confidence 0 00112234566779999875
Q ss_pred eEEEEeCC-EEEE-cceeEEEEeCeEEEcCCCCCCCC
Q psy7665 232 KAVFVDKH-RVKF-AGEERTVSAQNFIIAVGGRPTYP 266 (296)
Q Consensus 232 ~~~~~~~~-~v~v-~g~~~~~~a~~vV~AtG~~p~~p 266 (296)
........ .+.+ ++ .++.+|.||+|+|.+|..+
T Consensus 195 ~v~~i~~~~~v~~~~g--~~~~~D~vi~a~G~~p~~~ 229 (297)
T 3fbs_A 195 RIREIAGHADVVLADG--RSIALAGLFTQPKLRITVD 229 (297)
T ss_dssp CEEEEETTEEEEETTS--CEEEESEEEECCEEECCCS
T ss_pred eeeeeecCCeEEeCCC--CEEEEEEEEEccCcccCch
Confidence 44444443 5666 55 5789999999999887654
No 167
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.78 E-value=1.1e-07 Score=90.97 Aligned_cols=33 Identities=42% Similarity=0.534 Sum_probs=30.6
Q ss_pred ccccEEEECCChHHHHHHHHHH---h-CCCcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAA---S-MNKKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~---~-~G~~V~iiE~ 146 (296)
..+||||||||++|++||+.|+ + .|.+|+|+|+
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK 57 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEK 57 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECS
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeC
Confidence 5689999999999999999999 6 8999999994
No 168
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.77 E-value=1e-08 Score=94.80 Aligned_cols=62 Identities=23% Similarity=0.287 Sum_probs=58.6
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWI 63 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~ 63 (296)
.+|+++|+++++|||+|++|++|+|+|+.++++|+++.+.++|.+++++|||++|.+...+.
T Consensus 407 ~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~a~~ 468 (482)
T 1ojt_A 407 FTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHPHPTLGESIGMAAE 468 (482)
T ss_dssp EEEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSSSTTHHHHHHH
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999987764
No 169
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.77 E-value=2.9e-08 Score=90.75 Aligned_cols=136 Identities=20% Similarity=0.167 Sum_probs=83.9
Q ss_pred cceeeeeeeccccCCccchhhhccCc--c---eeecc--ccC-CCCccccEEEECCChHHHHHHHHHHhCCCcEEEEecc
Q psy7665 76 HTPYLVLAKARFLLPTLECQEVYHDG--R---FYDYL--DNN-FQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFV 147 (296)
Q Consensus 76 ~~p~~v~~~~~~~~~~~~~~~~~~~~--~---~~~~~--~~~-~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~ 147 (296)
+.+|.+++++|+.+..++.++..... . ..+.. ... ......+++|||||++|+++|..|++.|.+|+++|
T Consensus 102 ~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~-- 179 (447)
T 1nhp_A 102 ENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVID-- 179 (447)
T ss_dssp EECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEE--
T ss_pred EeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEe--
Confidence 57899999999876655544432111 1 11110 000 00134699999999999999999999999999999
Q ss_pred CCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcE
Q psy7665 148 TPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKID 227 (296)
Q Consensus 148 ~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 227 (296)
+.+ .+... .++ ..+...+...+++.|++
T Consensus 180 ~~~------~~l~~----------------------------------~~~------------~~~~~~l~~~l~~~gv~ 207 (447)
T 1nhp_A 180 ILD------RPLGV----------------------------------YLD------------KEFTDVLTEEMEANNIT 207 (447)
T ss_dssp SSS------STTTT----------------------------------TCC------------HHHHHHHHHHHHTTTEE
T ss_pred cCc------ccccc----------------------------------cCC------------HHHHHHHHHHHHhCCCE
Confidence 443 11000 001 11222345566778999
Q ss_pred EEcce-EEEE-eCC---EEEEcceeEEEEeCeEEEcCCCCCCCCC
Q psy7665 228 YFNAK-AVFV-DKH---RVKFAGEERTVSAQNFIIAVGGRPTYPD 267 (296)
Q Consensus 228 ~~~~~-~~~~-~~~---~v~v~g~~~~~~a~~vV~AtG~~p~~p~ 267 (296)
++.+. .... ... .+..++ .++.+|.||+|+|.+|+.+.
T Consensus 208 i~~~~~v~~i~~~~~v~~v~~~~--~~i~~d~vi~a~G~~p~~~~ 250 (447)
T 1nhp_A 208 IATGETVERYEGDGRVQKVVTDK--NAYDADLVVVAVGVRPNTAW 250 (447)
T ss_dssp EEESCCEEEEECSSBCCEEEESS--CEEECSEEEECSCEEESCGG
T ss_pred EEcCCEEEEEEccCcEEEEEECC--CEEECCEEEECcCCCCChHH
Confidence 98753 2222 222 233455 57899999999999887543
No 170
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.76 E-value=3.5e-08 Score=89.06 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=30.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhC--CCcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASM--NKKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE~ 146 (296)
..+||+|||||++|+++|++|+++ |.+|+|+|+
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~ 69 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEE 69 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeC
Confidence 358999999999999999999999 999999993
No 171
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.76 E-value=7.3e-09 Score=94.93 Aligned_cols=58 Identities=28% Similarity=0.419 Sum_probs=54.8
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAIS 59 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~ 59 (296)
.+|+++|+++++|||+|++|++|+|+|+.++++|+++.+.++|.+++++|||++|.+.
T Consensus 390 ~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~ 447 (450)
T 1ges_A 390 RMKLVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFV 447 (450)
T ss_dssp EEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGG
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCChHHHHH
Confidence 3689999999999999999999999999999999999999999999999999999653
No 172
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.75 E-value=7.3e-08 Score=89.42 Aligned_cols=33 Identities=24% Similarity=0.359 Sum_probs=31.0
Q ss_pred CccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 113 TYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 113 ~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..+||+||||||+|+++|..|++.|.+|+|||
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE 42 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLE 42 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEE
Confidence 366899999999999999999999999999999
No 173
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.75 E-value=1e-07 Score=85.67 Aligned_cols=46 Identities=26% Similarity=0.455 Sum_probs=36.0
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCee
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTC 162 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~ 162 (296)
..+||+|||||++|+++|..|++.|.+|+|+| +.+.++.+ ..|+.+
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E--~~~~~~~~-~~g~~~ 70 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYE--RDNDREAR-IFGGTL 70 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEE--CSSSTTCC-CCSCCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEe--CCCCcccc-ccCCee
Confidence 45799999999999999999999999999999 54433322 235444
No 174
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.75 E-value=4.2e-08 Score=88.72 Aligned_cols=134 Identities=15% Similarity=0.110 Sum_probs=84.8
Q ss_pred ccceeeeeeeccccCCccch-hhhc-cCc---ceeec--cccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEecc
Q psy7665 75 LHTPYLVLAKARFLLPTLEC-QEVY-HDG---RFYDY--LDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFV 147 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~-~~~~-~~~---~~~~~--~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~ 147 (296)
.+.+|.+++++|+.+..++. ++.. ... ...+. +... .....+|+|||||+.|+++|..|++.|.+|+++|
T Consensus 99 ~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~-- 175 (408)
T 2gqw_A 99 TLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAG-LRPQSRLLIVGGGVIGLELAATARTAGVHVSLVE-- 175 (408)
T ss_dssp EEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTT-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE--
T ss_pred EEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHH-hhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEE--
Confidence 46789999999987665554 3332 111 11111 1111 1124589999999999999999999999999999
Q ss_pred CCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcE
Q psy7665 148 TPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKID 227 (296)
Q Consensus 148 ~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 227 (296)
+.+ .+... ..+ ..+...+...+++.||+
T Consensus 176 ~~~------~~l~~----------------------------------~~~------------~~~~~~l~~~l~~~GV~ 203 (408)
T 2gqw_A 176 TQP------RLMSR----------------------------------AAP------------ATLADFVARYHAAQGVD 203 (408)
T ss_dssp SSS------SSSTT----------------------------------TSC------------HHHHHHHHHHHHHTTCE
T ss_pred eCC------ccccc----------------------------------ccC------------HHHHHHHHHHHHHcCcE
Confidence 443 11000 000 11122344556778999
Q ss_pred EEcce-EEEEeCCEEEE-cceeEEEEeCeEEEcCCCCCCC
Q psy7665 228 YFNAK-AVFVDKHRVKF-AGEERTVSAQNFIIAVGGRPTY 265 (296)
Q Consensus 228 ~~~~~-~~~~~~~~v~v-~g~~~~~~a~~vV~AtG~~p~~ 265 (296)
++.+. ........+++ +| .++.||.||+|+|.+|+.
T Consensus 204 i~~~~~v~~i~~~~v~~~~g--~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 204 LRFERSVTGSVDGVVLLDDG--TRIAADMVVVGIGVLAND 241 (408)
T ss_dssp EEESCCEEEEETTEEEETTS--CEEECSEEEECSCEEECC
T ss_pred EEeCCEEEEEECCEEEECCC--CEEEcCEEEECcCCCccH
Confidence 98763 32232346666 55 578999999999988764
No 175
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.74 E-value=5e-08 Score=87.69 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=30.1
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+||+|||||++|+++|..|++.|.+|+|+|
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE 36 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVE 36 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEe
Confidence 5799999999999999999999999999999
No 176
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.73 E-value=4.2e-10 Score=101.14 Aligned_cols=99 Identities=11% Similarity=-0.014 Sum_probs=63.6
Q ss_pred CcCCCCChHHHHHHHHHhhcCCCC----------ceeeccceeeeeeeccccCCccchhhhccCcc---eeeccccCC-C
Q psy7665 47 LIGIHPTCAEAISLSWIKGYNIEP----------EVIKLHTPYLVLAKARFLLPTLECQEVYHDGR---FYDYLDNNF-Q 112 (296)
Q Consensus 47 ~i~~~pt~~e~l~v~~~~~~~~~~----------~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~ 112 (296)
....++...+..++.++++++++. +.-..+.+|.+++|+|+.+..++.++...... ..+...-.. .
T Consensus 64 l~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p~i~G~~~v~~~~~~~d~~~l~~~l 143 (385)
T 3klj_A 64 ILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHADEIFSLYSYDDALKIKDEC 143 (385)
T ss_dssp TBSSCHHHHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTCSCEECCSSHHHHHHHHHHH
T ss_pred ccCCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCCCCCCCCCCeEEeCCHHHHHHHHHHh
Confidence 344455555666777776665532 11135678999999998776665554431111 111111000 0
Q ss_pred CccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 113 TYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 113 ~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
....+|+|||||+.|+++|..|++.|.+|+++|
T Consensus 144 ~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~ 176 (385)
T 3klj_A 144 KNKGKAFIIGGGILGIELAQAIIDSGTPASIGI 176 (385)
T ss_dssp HHHSCEEEECCSHHHHHHHHHHHHHTCCEEEEC
T ss_pred hcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 013589999999999999999999999999999
No 177
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.72 E-value=1.6e-08 Score=92.78 Aligned_cols=62 Identities=24% Similarity=0.215 Sum_probs=58.2
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWI 63 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~ 63 (296)
.+|+++|+++++|||+|++|++|+|+|+.++++|+++.+.++|.+++++|||++|.+...++
T Consensus 391 ~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 452 (455)
T 1ebd_A 391 FLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEIAMEAAE 452 (455)
T ss_dssp EEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTSSTHHHHHHHH
T ss_pred EEEEEEECCCCEEEEEEEeCCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999977654
No 178
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.72 E-value=1.6e-07 Score=84.70 Aligned_cols=31 Identities=29% Similarity=0.487 Sum_probs=29.9
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCc-EEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKK-VALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~-V~iiE 145 (296)
.+||+|||||++|+++|..|++.|.+ |+|+|
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E 35 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLE 35 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 46999999999999999999999999 99999
No 179
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.72 E-value=4.2e-08 Score=88.76 Aligned_cols=156 Identities=17% Similarity=0.182 Sum_probs=93.3
Q ss_pred ChHHHHHHHHHhhcCCCC-----cee-----eccceeeeeeeccccCCccchhhhccC--cc---eeec--cccCCCCcc
Q psy7665 53 TCAEAISLSWIKGYNIEP-----EVI-----KLHTPYLVLAKARFLLPTLECQEVYHD--GR---FYDY--LDNNFQTYD 115 (296)
Q Consensus 53 t~~e~l~v~~~~~~~~~~-----~~~-----~~~~p~~v~~~~~~~~~~~~~~~~~~~--~~---~~~~--~~~~~~~~~ 115 (296)
...+..++.++++++++. ..+ ..+.+|.+++++|+.+..++.++.... .. ..+. +... ....
T Consensus 65 ~~~~~~~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~-~~~~ 143 (410)
T 3ef6_A 65 DWYGEARIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDS-WTSA 143 (410)
T ss_dssp THHHHTTCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHH-CCTT
T ss_pred HHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHH-hccC
Confidence 344455666666544421 111 246789999999987655544433211 11 1111 1111 1124
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccc
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKK 195 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~ 195 (296)
.+|+|||+|+.|+++|..+++.|.+|+++| +.+ .
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~--~~~------~-------------------------------------- 177 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILE--AGD------E-------------------------------------- 177 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC--SSS------S--------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEe--cCC------c--------------------------------------
Confidence 589999999999999999999999999999 433 0
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceE-EEEeCC----EEEE-cceeEEEEeCeEEEcCCCCCCC
Q psy7665 196 SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKA-VFVDKH----RVKF-AGEERTVSAQNFIIAVGGRPTY 265 (296)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~----~v~v-~g~~~~~~a~~vV~AtG~~p~~ 265 (296)
+-...+. ..+...+...+++.||+++.+.. ...... .+.+ +| .++.||.||+|+|.+|+.
T Consensus 178 -~l~~~~~-------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg--~~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 178 -LLVRVLG-------RRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDG--RSFVADSALICVGAEPAD 243 (410)
T ss_dssp -SSHHHHC-------HHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTS--CEEECSEEEECSCEEECC
T ss_pred -cchhhcC-------HHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCC--CEEEcCEEEEeeCCeecH
Confidence 0000000 11223344556777999986543 222221 4555 55 578999999999998765
No 180
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.72 E-value=9.2e-08 Score=88.52 Aligned_cols=136 Identities=17% Similarity=0.123 Sum_probs=83.8
Q ss_pred ccceeeeeeeccccCCccchhhhc-----------cCcce--------eeccccCCCCccccEEEECCChHHHHHHHHHH
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVY-----------HDGRF--------YDYLDNNFQTYDYDLCVIGGGSGGISAAKEAA 135 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~-----------~~~~~--------~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~ 135 (296)
.+..|.+++++|+.+..++.++.. ..... .++++........+|+|||||+.|+++|..|+
T Consensus 135 ~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~ 214 (490)
T 2bc0_A 135 VETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQ 214 (490)
T ss_dssp EEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHH
T ss_pred EEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHH
Confidence 367899999999876655444332 11111 11111110023458999999999999999999
Q ss_pred hCCCcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHH
Q psy7665 136 SMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNN 215 (296)
Q Consensus 136 ~~G~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (296)
+.|.+|+++| +.+ .+-. . .++ ..+..
T Consensus 215 ~~g~~Vtlv~--~~~------~~l~---------~-------------------------~~~------------~~~~~ 240 (490)
T 2bc0_A 215 RKGKEVVLID--VVD------TCLA---------G-------------------------YYD------------RDLTD 240 (490)
T ss_dssp HTTCEEEEEE--SSS------STTT---------T-------------------------TSC------------HHHHH
T ss_pred HCCCeEEEEE--ccc------chhh---------h-------------------------HHH------------HHHHH
Confidence 9999999999 443 1000 0 000 11122
Q ss_pred HHHHHHHHCCcEEEcceE-EEE-eCC---EEEEcceeEEEEeCeEEEcCCCCCCCC
Q psy7665 216 NYEKELEKNKIDYFNAKA-VFV-DKH---RVKFAGEERTVSAQNFIIAVGGRPTYP 266 (296)
Q Consensus 216 ~~~~~~~~~~v~~~~~~~-~~~-~~~---~v~v~g~~~~~~a~~vV~AtG~~p~~p 266 (296)
.+...+++.||+++.+.. ... ... .+..++ .++.+|.||+|+|.+|+.+
T Consensus 241 ~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~~g--~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 241 LMAKNMEEHGIQLAFGETVKEVAGNGKVEKIITDK--NEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp HHHHHHHTTTCEEEETCCEEEEECSSSCCEEEESS--CEEECSEEEECCCEEECCG
T ss_pred HHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEECC--cEEECCEEEECCCCCcChH
Confidence 345566778999987642 222 222 244455 5789999999999887654
No 181
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.71 E-value=1.2e-08 Score=94.28 Aligned_cols=58 Identities=29% Similarity=0.513 Sum_probs=55.2
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAIS 59 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~ 59 (296)
.+|+++|+++++|||+|++|++++|+|+.++++|+++.+.++|.+++++|||++|.+.
T Consensus 411 ~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~ 468 (479)
T 2hqm_A 411 RYKIVCAGPNEKVVGLHIVGDSSAEILQGFGVAIKMGATKADFDNCVAIHPTSAEELV 468 (479)
T ss_dssp EEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGG
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCChHHHHH
Confidence 3689999999999999999999999999999999999999999999999999999774
No 182
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.71 E-value=1.1e-07 Score=88.90 Aligned_cols=31 Identities=23% Similarity=0.462 Sum_probs=29.9
Q ss_pred cccEEEECCChHHHHHHHHHHh---CCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAAS---MNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~---~G~~V~iiE 145 (296)
.+||+|||||++|+++|+.|++ .|.+|+|||
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE 38 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIE 38 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEEC
Confidence 4699999999999999999999 999999999
No 183
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.71 E-value=2.3e-08 Score=91.97 Aligned_cols=62 Identities=23% Similarity=0.293 Sum_probs=58.3
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWI 63 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~ 63 (296)
.+|+++|+++++|||+|++|++|+|+|+.++++|+++.+.++|.+++++|||++|.+...+.
T Consensus 398 ~~kl~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 459 (468)
T 2qae_A 398 FVKVLVDKATDRILGVHIVCTTAGELIGEACLAMEYGASSEDVGRTCHAHPTMSEALKEACM 459 (468)
T ss_dssp EEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTHHHHHHHHH
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCCHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999977764
No 184
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.71 E-value=2.3e-08 Score=91.90 Aligned_cols=62 Identities=11% Similarity=0.207 Sum_probs=58.4
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWI 63 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~ 63 (296)
.+|+++|+++++|||+|++|++|+|+|+.++++|+++.+.++|.+++++|||++|.+...+.
T Consensus 394 ~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 455 (464)
T 2a8x_A 394 FVKLVADAKHGELLGGHLVGHDVAELLPELTLAQRWDLTASELARNVHTHPTMSEALQECFH 455 (464)
T ss_dssp EEEEEEETTTTEEEEEEEEETTGGGGHHHHHHHHHTTCBHHHHTTSCCCTTCTTHHHHHHHH
T ss_pred EEEEEEECCCCEEEEEEEECcCHHHHHHHHHHHHHCCCCHHHHhhCccCCCChHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999977764
No 185
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.71 E-value=1.6e-07 Score=84.43 Aligned_cols=32 Identities=22% Similarity=0.402 Sum_probs=30.4
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..+||+|||||++|+++|..|++.|.+|+|+|
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E 35 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYE 35 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEe
Confidence 34699999999999999999999999999999
No 186
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.71 E-value=1.1e-08 Score=92.95 Aligned_cols=47 Identities=36% Similarity=0.644 Sum_probs=40.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCeee--ccCCCch
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCV--NVGCIPK 170 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~~--~~~~~p~ 170 (296)
+||+|||||++|++||++|+++|++|+|+| +.+ .+||.|. +.+|+|.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE--~~~------~~GG~~~t~~~~cipg 50 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLE--GGE------RLGGRAYSRESRNVPG 50 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEEC--SSS------SSBTTCCEEECSSSTT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEe--cCC------CccCeecceeccCCCC
Confidence 699999999999999999999999999999 666 7888875 4466664
No 187
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.70 E-value=2.1e-08 Score=87.46 Aligned_cols=35 Identities=31% Similarity=0.453 Sum_probs=32.2
Q ss_pred ccccEEEECCChHHHHHHHHHHhC--CCcEEEEeccCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASM--NKKVALFDFVTPS 150 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE~~~~~ 150 (296)
..+||+|||||++|+.+|+.|++. |++|+|+| +.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e--~~~ 100 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE--SSV 100 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEEC--SSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEe--cCc
Confidence 457999999999999999999998 99999999 655
No 188
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.70 E-value=1e-07 Score=89.62 Aligned_cols=32 Identities=34% Similarity=0.473 Sum_probs=30.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..+||+|||||++|+.+|+.|+++|++|+|+|
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlE 48 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGIQTGLVE 48 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTCCEEEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEE
Confidence 46899999999999999999999999999999
No 189
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.70 E-value=1.4e-08 Score=94.02 Aligned_cols=57 Identities=26% Similarity=0.412 Sum_probs=54.7
Q ss_pred c-ceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHH
Q psy7665 3 L-PKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAIS 59 (296)
Q Consensus 3 ~-~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~ 59 (296)
+ |+|+|+++++|||+|++|++++|+|+.++++|+++.+.++|.+++++|||++|.+.
T Consensus 411 ~~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~ 468 (490)
T 1fec_A 411 MVRIVTNHADGEVLGVHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEELC 468 (490)
T ss_dssp EEEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSGGGGG
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHH
Confidence 5 89999999999999999999999999999999999999999999999999999764
No 190
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.70 E-value=4.3e-08 Score=87.84 Aligned_cols=134 Identities=12% Similarity=0.047 Sum_probs=82.6
Q ss_pred ccceeeeeeeccccCCccchhhhccC--cceeeccc-----cCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEecc
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYHD--GRFYDYLD-----NNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFV 147 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~ 147 (296)
.+.+|.+++++|+.+..++.++.... ....+..+ .. .....+++|||||+.|+++|..|++.|.+|+++|
T Consensus 99 ~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~-~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~-- 175 (384)
T 2v3a_A 99 EVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQA-AAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVA-- 175 (384)
T ss_dssp EEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHH-HTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEE--
T ss_pred EEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHh-hccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEe--
Confidence 46789999999987665544433211 11111110 00 0113589999999999999999999999999999
Q ss_pred CCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcE
Q psy7665 148 TPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKID 227 (296)
Q Consensus 148 ~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 227 (296)
+.+ .+... ..+ ..+...+...+++.|++
T Consensus 176 ~~~------~~~~~----------------------------------~~~------------~~~~~~l~~~l~~~gv~ 203 (384)
T 2v3a_A 176 PCE------QVMPG----------------------------------LLH------------PAAAKAVQAGLEGLGVR 203 (384)
T ss_dssp SSS------SSSTT----------------------------------TSC------------HHHHHHHHHHHHTTTCE
T ss_pred cCc------chhhc----------------------------------ccC------------HHHHHHHHHHHHHcCCE
Confidence 443 11100 000 11122344556777999
Q ss_pred EEcce-EEEE--eCCE--EEE-cceeEEEEeCeEEEcCCCCCCC
Q psy7665 228 YFNAK-AVFV--DKHR--VKF-AGEERTVSAQNFIIAVGGRPTY 265 (296)
Q Consensus 228 ~~~~~-~~~~--~~~~--v~v-~g~~~~~~a~~vV~AtG~~p~~ 265 (296)
++.+. .... +... +.+ +| .++.+|.||+|+|.+|+.
T Consensus 204 i~~~~~v~~i~~~~~~~~v~~~~g--~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 204 FHLGPVLASLKKAGEGLEAHLSDG--EVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp EEESCCEEEEEEETTEEEEEETTS--CEEEESEEEECSCEEECC
T ss_pred EEeCCEEEEEEecCCEEEEEECCC--CEEECCEEEECcCCCcCH
Confidence 98764 2222 2333 333 45 578999999999988765
No 191
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.69 E-value=1.4e-08 Score=94.19 Aligned_cols=57 Identities=28% Similarity=0.366 Sum_probs=54.9
Q ss_pred cceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHH
Q psy7665 3 LPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAIS 59 (296)
Q Consensus 3 ~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~ 59 (296)
+|+|+|+++++|||+|++|++|+|+|+.++++|+++++.++|.+++++|||++|.+.
T Consensus 416 ~klv~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~ 472 (495)
T 2wpf_A 416 AKIVTNHSDGTVLGVHLLGDGAPEIIQAVGVCLRLNAKISDFYNTIGVHPTSAEELC 472 (495)
T ss_dssp EEEEEETTTCBEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGG
T ss_pred EEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHH
Confidence 799999999999999999999999999999999999999999999999999999764
No 192
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.68 E-value=2e-08 Score=93.21 Aligned_cols=58 Identities=36% Similarity=0.435 Sum_probs=55.4
Q ss_pred cceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHH
Q psy7665 3 LPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISL 60 (296)
Q Consensus 3 ~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v 60 (296)
+|+++|+++++|||+|++|++++|+|+.++++|+++.+.++|.+++++|||++|.+..
T Consensus 437 ~kli~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~~Pt~~e~~~~ 494 (500)
T 1onf_A 437 LKLVCVGKDELIKGLHIIGLNADEIVQGFAVALKMNATKKDFDETIPIHPTAAEEFLT 494 (500)
T ss_dssp EEEEEETTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCSTTHHHH
T ss_pred EEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhccccCCCCHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999998753
No 193
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.68 E-value=2.9e-08 Score=91.33 Aligned_cols=61 Identities=25% Similarity=0.354 Sum_probs=58.0
Q ss_pred cceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHH
Q psy7665 3 LPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWI 63 (296)
Q Consensus 3 ~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~ 63 (296)
+|+++|+++++|||+|++|++|+|+|+.++++|+++.+.++|.+++++|||++|.+...+.
T Consensus 401 ~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 461 (470)
T 1dxl_A 401 VKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKEAAM 461 (470)
T ss_dssp EEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCSSCTTHHHHHHHH
T ss_pred EEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhcccCCCChHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999999999977764
No 194
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.67 E-value=1.3e-07 Score=82.05 Aligned_cols=134 Identities=15% Similarity=0.158 Sum_probs=81.6
Q ss_pred ccceeeeeeeccccCCccchhhhcc--Cccee--eccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCC
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYH--DGRFY--DYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPS 150 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~ 150 (296)
.+.+|.+++++|..+..++.+.... ..... ...+.. .....+|+|||+|++|+++|..|++.|.+|++++ +.+
T Consensus 102 ~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~--~~~ 178 (320)
T 1trb_A 102 EYTCDALIIATGASARYLGLPSEEAFKGRGVSACATSDGF-FYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIH--RRD 178 (320)
T ss_dssp EEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHHHHGG-GGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEEC--SSS
T ss_pred EEEcCEEEECCCCCcCCCCCCChHHhCCceeEecccCCcc-ccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEE--eCC
Confidence 3568899999997655444333221 00110 001110 1123589999999999999999999999999999 433
Q ss_pred CCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEc
Q psy7665 151 QHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFN 230 (296)
Q Consensus 151 ~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 230 (296)
.+. .+ ..+...+...+++.||+++.
T Consensus 179 ------~~~-------------------------------------~~------------~~~~~~l~~~l~~~gv~i~~ 203 (320)
T 1trb_A 179 ------GFR-------------------------------------AE------------KILIKRLMDKVENGNIILHT 203 (320)
T ss_dssp ------SCC-------------------------------------CC------------HHHHHHHHHHHHTSSEEEEC
T ss_pred ------ccc-------------------------------------cC------------HHHHHHHHHhcccCCeEEEc
Confidence 000 00 01112234456678999987
Q ss_pred ceE-EEE-eCC----EEEE-c----ceeEEEEeCeEEEcCCCCCCCC
Q psy7665 231 AKA-VFV-DKH----RVKF-A----GEERTVSAQNFIIAVGGRPTYP 266 (296)
Q Consensus 231 ~~~-~~~-~~~----~v~v-~----g~~~~~~a~~vV~AtG~~p~~p 266 (296)
+.. ... ... .+.+ + ++..++.+|.||+|+|.+|...
T Consensus 204 ~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 250 (320)
T 1trb_A 204 NRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTA 250 (320)
T ss_dssp SCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCG
T ss_pred CceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChH
Confidence 643 222 221 2555 3 4446799999999999887653
No 195
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.67 E-value=3.1e-08 Score=91.08 Aligned_cols=62 Identities=24% Similarity=0.300 Sum_probs=58.6
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWI 63 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~ 63 (296)
.+|+++|+++++|||+|++|++|+|+|+.++++|+++.+.++|.+.+++|||++|.+...++
T Consensus 391 ~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 452 (464)
T 2eq6_A 391 MVKVVGDEETDLLLGVFIVGPQAGELIAEAALALEMGATLTDLALTVHPHPTLSESLMEAAE 452 (464)
T ss_dssp EEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCTTHHHHHHHH
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCcCCCCChHHHHHHHHH
Confidence 36889999899999999999999999999999999999999999999999999999987765
No 196
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.67 E-value=4.1e-08 Score=86.43 Aligned_cols=33 Identities=18% Similarity=0.238 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHHh---CCCcEEEEeccCCC
Q psy7665 116 YDLCVIGGGSGGISAAKEAAS---MNKKVALFDFVTPS 150 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~---~G~~V~iiE~~~~~ 150 (296)
+||+|||||++|+++|+.|++ .|++|+|+| +..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~E--k~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWD--KAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEEC--SSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEE--CCC
Confidence 489999999999999999999 999999999 555
No 197
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.66 E-value=1.7e-07 Score=85.91 Aligned_cols=71 Identities=14% Similarity=0.171 Sum_probs=45.6
Q ss_pred ccceeeeeeeccccCCccchhh-hccC-cce--eecccc-CC----CCccccEEEECCChHHHHHHHHHHhC--CCcEEE
Q psy7665 75 LHTPYLVLAKARFLLPTLECQE-VYHD-GRF--YDYLDN-NF----QTYDYDLCVIGGGSGGISAAKEAASM--NKKVAL 143 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~-~~~~-~~~--~~~~~~-~~----~~~~~dVvVIGgG~aG~~aA~~l~~~--G~~V~i 143 (296)
.+..|.+|+++|..+..++... .... ... .+.... .. .....+|+|||||.+|+++|..|++. |.+|++
T Consensus 178 ~~~~d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~ 257 (463)
T 3s5w_A 178 VRTTRALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADM 257 (463)
T ss_dssp EEEESEEEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEE
T ss_pred EEEeCEEEECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEE
Confidence 4567899999998655443211 1111 111 111110 00 01356899999999999999999999 899999
Q ss_pred Ee
Q psy7665 144 FD 145 (296)
Q Consensus 144 iE 145 (296)
++
T Consensus 258 v~ 259 (463)
T 3s5w_A 258 IL 259 (463)
T ss_dssp EC
T ss_pred EE
Confidence 99
No 198
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.66 E-value=3.1e-07 Score=80.27 Aligned_cols=135 Identities=12% Similarity=0.133 Sum_probs=81.1
Q ss_pred ccceeeeeeeccc---cCCccchhhhcc--CcceeeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCC
Q psy7665 75 LHTPYLVLAKARF---LLPTLECQEVYH--DGRFYDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTP 149 (296)
Q Consensus 75 ~~~p~~v~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~ 149 (296)
.+.+|.+|+++|. .+..++.++... .......+.........+|+|||+|..|+++|..|++.|.+|++++ +.
T Consensus 107 ~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~--~~ 184 (335)
T 2zbw_A 107 AYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIH--RR 184 (335)
T ss_dssp EEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEEC--SS
T ss_pred EEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEE--cC
Confidence 3567899999997 343333332211 1111111111111124589999999999999999999999999999 43
Q ss_pred CCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEEE
Q psy7665 150 SQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYF 229 (296)
Q Consensus 150 ~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 229 (296)
+ .+.. . +.. ...+...+++.+++++
T Consensus 185 ~------~~~~-------------------------------------~-~~~-----------~~~l~~~l~~~gv~v~ 209 (335)
T 2zbw_A 185 P------QFRA-------------------------------------H-EAS-----------VKELMKAHEEGRLEVL 209 (335)
T ss_dssp S------SCCS-------------------------------------C-HHH-----------HHHHHHHHHTTSSEEE
T ss_pred C------ccCc-------------------------------------c-HHH-----------HHHHHhccccCCeEEe
Confidence 3 1000 0 011 1223445667799998
Q ss_pred cceE-EEE-eC-C--EEEE----cceeEEEEeCeEEEcCCCCCCCC
Q psy7665 230 NAKA-VFV-DK-H--RVKF----AGEERTVSAQNFIIAVGGRPTYP 266 (296)
Q Consensus 230 ~~~~-~~~-~~-~--~v~v----~g~~~~~~a~~vV~AtG~~p~~p 266 (296)
.+.. ... .. . .+.+ +|+..++.+|.||+|+|.+|..+
T Consensus 210 ~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 255 (335)
T 2zbw_A 210 TPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLG 255 (335)
T ss_dssp TTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECG
T ss_pred cCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCch
Confidence 8743 222 22 2 4554 24346789999999999887653
No 199
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.65 E-value=1.8e-07 Score=86.35 Aligned_cols=135 Identities=19% Similarity=0.229 Sum_probs=82.4
Q ss_pred ccceeeeeeeccccCCccchhhhccCc--c---eeecc--ccCC-CCccccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYHDG--R---FYDYL--DNNF-QTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~~~--~---~~~~~--~~~~-~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
.+..|.+|+++|+.+..++.++..... . ..+.. .... .....+|+|||||++|+++|..|++.|.+|+++|
T Consensus 138 ~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~- 216 (480)
T 3cgb_A 138 EFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIE- 216 (480)
T ss_dssp EEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEEC-
T ss_pred EEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEE-
Confidence 367889999999876555444332111 1 11111 0000 0023589999999999999999999999999999
Q ss_pred cCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCc
Q psy7665 147 VTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKI 226 (296)
Q Consensus 147 ~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 226 (296)
+.+ .+.. .++ ..+...+...+++.|+
T Consensus 217 -~~~------~~l~-----------------------------------~~~------------~~~~~~l~~~l~~~Gv 242 (480)
T 3cgb_A 217 -RND------HIGT-----------------------------------IYD------------GDMAEYIYKEADKHHI 242 (480)
T ss_dssp -CGG------GTTS-----------------------------------SSC------------HHHHHHHHHHHHHTTC
T ss_pred -eCC------chhh-----------------------------------cCC------------HHHHHHHHHHHHHcCc
Confidence 333 1110 001 1112234455677899
Q ss_pred EEEcceE-EE-EeCCEE---EEcceeEEEEeCeEEEcCCCCCCCC
Q psy7665 227 DYFNAKA-VF-VDKHRV---KFAGEERTVSAQNFIIAVGGRPTYP 266 (296)
Q Consensus 227 ~~~~~~~-~~-~~~~~v---~v~g~~~~~~a~~vV~AtG~~p~~p 266 (296)
+++.+.. .. .....+ ..++ .++.+|.||+|+|.+|+.+
T Consensus 243 ~i~~~~~v~~i~~~~~v~~v~~~~--~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 243 EILTNENVKAFKGNERVEAVETDK--GTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp EEECSCCEEEEEESSBEEEEEETT--EEEECSEEEECSCEEESCG
T ss_pred EEEcCCEEEEEEcCCcEEEEEECC--CEEEcCEEEECcCCCcChH
Confidence 9987532 22 222323 2355 5799999999999887653
No 200
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.65 E-value=2.1e-07 Score=84.24 Aligned_cols=135 Identities=19% Similarity=0.157 Sum_probs=83.4
Q ss_pred ccceeeeeeeccccCCccchhhhccCc--c---eeecc--ccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEecc
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYHDG--R---FYDYL--DNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFV 147 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~~~--~---~~~~~--~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~ 147 (296)
.+.+|.+++++|+.+..++.++..... . ..+.. .........+|+|||+|+.|+++|..+++.|.+|+++|
T Consensus 105 ~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~-- 182 (415)
T 3lxd_A 105 AIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLE-- 182 (415)
T ss_dssp EEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEE--
T ss_pred EEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEe--
Confidence 567899999999876665544432111 1 11111 00000004589999999999999999999999999999
Q ss_pred CCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcE
Q psy7665 148 TPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKID 227 (296)
Q Consensus 148 ~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 227 (296)
+.+ .+-.. ..+ ..+...+...+++.||+
T Consensus 183 ~~~------~~l~~----------------------------------~~~------------~~~~~~l~~~l~~~GV~ 210 (415)
T 3lxd_A 183 ALP------RVLAR----------------------------------VAG------------EALSEFYQAEHRAHGVD 210 (415)
T ss_dssp SSS------STTTT----------------------------------TSC------------HHHHHHHHHHHHHTTCE
T ss_pred cCC------chhhh----------------------------------hcC------------HHHHHHHHHHHHhCCCE
Confidence 443 11000 000 11122344556778999
Q ss_pred EEcceE-EE-Ee-CC---EEEE-cceeEEEEeCeEEEcCCCCCCC
Q psy7665 228 YFNAKA-VF-VD-KH---RVKF-AGEERTVSAQNFIIAVGGRPTY 265 (296)
Q Consensus 228 ~~~~~~-~~-~~-~~---~v~v-~g~~~~~~a~~vV~AtG~~p~~ 265 (296)
++.+.. .. .. .. .+.+ +| .++.||.||+|+|.+|+.
T Consensus 211 i~~~~~v~~i~~~~~~v~~v~l~dG--~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 211 LRTGAAMDCIEGDGTKVTGVRMQDG--SVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp EEETCCEEEEEESSSBEEEEEESSS--CEEECSEEEECSCCEESC
T ss_pred EEECCEEEEEEecCCcEEEEEeCCC--CEEEcCEEEECCCCccCh
Confidence 986532 22 22 22 3444 55 578999999999998875
No 201
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.65 E-value=3.9e-08 Score=90.63 Aligned_cols=62 Identities=27% Similarity=0.341 Sum_probs=58.4
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWI 63 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~ 63 (296)
.+|+++|+++++|||+|++|++++|+|+.++++|+++.+.++|.+++++|||++|.+...+.
T Consensus 403 ~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 464 (474)
T 1zmd_A 403 MVKILGQKSTDRVLGAHILGPGAGEMVNEAALALEYGASCEDIARVCHAHPTLSEAFREANL 464 (474)
T ss_dssp EEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHHSCCCTTCTHHHHHHHHH
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999977764
No 202
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.64 E-value=4.1e-08 Score=91.62 Aligned_cols=62 Identities=11% Similarity=0.022 Sum_probs=58.1
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccC--cCCCCChHHHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDAL--IGIHPTCAEAISLSWI 63 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~--i~~~pt~~e~l~v~~~ 63 (296)
.+|+++|+++++|||+|++|++++|+|+.++++|+++.+.++|.++ +++|||++|.+.....
T Consensus 452 ~~k~~~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~~Pt~~e~~~~~~~ 515 (523)
T 1mo9_A 452 FQKIVIDAKTRKVLGAHHVGYGAKDAFQYLNVLIKQGLTVDELGDMDELFLNPTHFIQLSRLRA 515 (523)
T ss_dssp EEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTSCCCSSCSCCHHHHHHHHT
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHhCCcceECCCHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999 9999999999976654
No 203
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.64 E-value=4.8e-08 Score=90.63 Aligned_cols=62 Identities=11% Similarity=0.082 Sum_probs=58.3
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWI 63 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~ 63 (296)
.+|+++|+++++|||++++|++++|+|+.++++|+++.+.++|.+.+++|||++|.+...+.
T Consensus 401 ~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 462 (499)
T 1xdi_A 401 FVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTLAVYPSLSGSITEAAR 462 (499)
T ss_dssp EEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHHTCBHHHHHTSBCCSSSTHHHHHHHHH
T ss_pred EEEEEEECCCCEEEEEEEECCchHHHHHHHHHHHHCCCCHHHHhcccccCCCchHHHHHHHH
Confidence 36899999899999999999999999999999999999999999999999999999877664
No 204
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.64 E-value=3.9e-07 Score=85.49 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=32.1
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPS 150 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~ 150 (296)
..+||+||||||+|+++|..|++.|.+|+||| +.+
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlE--r~~ 59 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVE--QTD 59 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEe--CCC
Confidence 45799999999999999999999999999999 444
No 205
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.64 E-value=1.9e-08 Score=93.36 Aligned_cols=42 Identities=29% Similarity=0.414 Sum_probs=36.2
Q ss_pred CccccEEEECCChHHHHHHHHHHh-CCCcEEEEeccCCCCCCcccccCCee
Q psy7665 113 TYDYDLCVIGGGSGGISAAKEAAS-MNKKVALFDFVTPSQHGTVWGLGGTC 162 (296)
Q Consensus 113 ~~~~dVvVIGgG~aG~~aA~~l~~-~G~~V~iiE~~~~~~~g~~~~~GG~~ 162 (296)
+..+||+|||||++||+||++|++ .|++|+|+| +.+ .+||.|
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE--~~~------~~GG~~ 50 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVD--SNE------TPGGLA 50 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEE--SSS------SCCGGG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEE--CCC------CCcCCe
Confidence 467899999999999999999997 599999999 777 556643
No 206
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.63 E-value=5.3e-08 Score=89.55 Aligned_cols=62 Identities=18% Similarity=0.088 Sum_probs=58.7
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWI 63 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~ 63 (296)
.+|+++|+++++|||++++|++++|+|+.++++|+++.+.++|.+++++|||++|.+...+.
T Consensus 392 ~~kl~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~pt~~e~~~~~~~ 453 (467)
T 1zk7_A 392 FIKLVIEEGSHRLIGVQAVAPEAGELIQTAALAIRNRMTVQELADQLFPYLTMVEGLKLAAQ 453 (467)
T ss_dssp EEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTSTTHHHHHHHH
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhcCccCCCCHHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999999999999988764
No 207
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.63 E-value=2.5e-08 Score=91.36 Aligned_cols=57 Identities=16% Similarity=0.076 Sum_probs=53.6
Q ss_pred CcceeecCCCCeEEEEEEEcC-ChhHHHHHHHHHHHcCCCHHHHccC-cCCCCChHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSN-NAGEITQGYALGVMLGAYKQDFDAL-IGIHPTCAEAI 58 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~-~a~e~i~~~~~~~~~~~~k~~l~~~-i~~~pt~~e~l 58 (296)
.+|+|+|++|++|||+|++|+ +|+|+|+.++++|+++.+.++|.++ +++||+++|.+
T Consensus 370 ~~kli~~~~~~~ilG~~~~g~~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~ 428 (452)
T 3oc4_A 370 LGKLIYDKVTQRVLGAQLCSKNNCLEKINTLALSIQTGQTLTDLLQKDYFYQPSLTNIY 428 (452)
T ss_dssp EEEEEEETTTCBEEEEEEEESSCCTHHHHHHHHHHHTTCBHHHHHTCCCCCCTTTSCSS
T ss_pred EEEEEEECCCCEEEEEEEEeCCCHHHHHHHHHHHHHcCCCHHHHHhhHhccCCCCCCch
Confidence 378999999999999999999 8999999999999999999999998 89999999954
No 208
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.62 E-value=1.3e-07 Score=88.25 Aligned_cols=31 Identities=23% Similarity=0.427 Sum_probs=29.8
Q ss_pred cccEEEECCChHHHHHHHHHHh------------CCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAAS------------MNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~------------~G~~V~iiE 145 (296)
.+||+|||||++|+++|..|++ .|.+|+|||
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE 49 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIE 49 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEe
Confidence 4699999999999999999999 999999999
No 209
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.62 E-value=5.4e-07 Score=78.49 Aligned_cols=70 Identities=13% Similarity=0.025 Sum_probs=46.6
Q ss_pred ccceeeeeeeccccCCccchhhhccC--ccee--eccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYHD--GRFY--DYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+.+|.+|+++|..+..++.+..... .... ...... .....+|+|||+|+.|+++|..|++.|.+|++++
T Consensus 109 ~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~-~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~ 182 (325)
T 2q7v_A 109 EYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATCDGF-FYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIH 182 (325)
T ss_dssp EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGG-GGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEEC
T ss_pred EEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccCCHH-HcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEe
Confidence 35688999999976554443332210 0110 011111 1123589999999999999999999999999999
No 210
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.62 E-value=2.6e-07 Score=83.33 Aligned_cols=134 Identities=14% Similarity=0.135 Sum_probs=82.5
Q ss_pred ccceeeeeeeccccCCccchhhhccC--c---ceeec--cccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEecc
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYHD--G---RFYDY--LDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFV 147 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~~--~---~~~~~--~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~ 147 (296)
.+.+|.+++++|..+..++.++.... . ...+. +... .....+|+|||+|+.|+++|..+++.|.+|++++
T Consensus 96 ~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~-~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~-- 172 (404)
T 3fg2_P 96 AIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQR-MPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVE-- 172 (404)
T ss_dssp EEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHH-GGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEEC--
T ss_pred EEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHH-hhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEe--
Confidence 46788999999976555444332211 1 11111 1110 0123589999999999999999999999999999
Q ss_pred CCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcE
Q psy7665 148 TPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKID 227 (296)
Q Consensus 148 ~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 227 (296)
+.+ .+... ..+ ..+...+...+++.||+
T Consensus 173 ~~~------~~~~~----------------------------------~~~------------~~~~~~l~~~l~~~GV~ 200 (404)
T 3fg2_P 173 LAP------RVMAR----------------------------------VVT------------PEISSYFHDRHSGAGIR 200 (404)
T ss_dssp SSS------STTTT----------------------------------TSC------------HHHHHHHHHHHHHTTCE
T ss_pred CCC------cchhh----------------------------------ccC------------HHHHHHHHHHHHhCCcE
Confidence 433 11000 000 11122344566778999
Q ss_pred EEcceE-EEE--eCCE---EEE-cceeEEEEeCeEEEcCCCCCCC
Q psy7665 228 YFNAKA-VFV--DKHR---VKF-AGEERTVSAQNFIIAVGGRPTY 265 (296)
Q Consensus 228 ~~~~~~-~~~--~~~~---v~v-~g~~~~~~a~~vV~AtG~~p~~ 265 (296)
++.+.. ... +... +.+ +| .++.||.||+|+|.+|+.
T Consensus 201 i~~~~~v~~i~~~~~~v~~V~~~dG--~~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 201 MHYGVRATEIAAEGDRVTGVVLSDG--NTLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp EECSCCEEEEEEETTEEEEEEETTS--CEEECSEEEECCCEEECC
T ss_pred EEECCEEEEEEecCCcEEEEEeCCC--CEEEcCEEEECcCCccCH
Confidence 987632 222 2222 444 55 578999999999998765
No 211
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.62 E-value=1.5e-06 Score=81.31 Aligned_cols=69 Identities=13% Similarity=0.104 Sum_probs=46.5
Q ss_pred cceeeeeeeccc--cCCccchhhhcc--Ccce--eeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 76 HTPYLVLAKARF--LLPTLECQEVYH--DGRF--YDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 76 ~~p~~v~~~~~~--~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..|.+|+|+|. .+..+..++.+. .... ..... .....+.+|+|||+|.+|+++|..|++.|.+|++++
T Consensus 134 i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~-~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~ 208 (540)
T 3gwf_A 134 YRAKYVVNAVGLLSAINFPNLPGLDTFEGETIHTAAWPE-GKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFV 208 (540)
T ss_dssp EEEEEEEECCCSCCSBCCCCCTTGGGCCSEEEEGGGCCS-SCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEE
T ss_pred EEeCEEEECCcccccCCCCCCCCccccCCCEEEeecCCC-ccccccceEEEECCCchHHHHHHHHHhhCCEEEEEE
Confidence 568999999993 444444433321 1001 11111 112245689999999999999999999999999999
No 212
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.62 E-value=4.5e-07 Score=89.25 Aligned_cols=31 Identities=23% Similarity=0.387 Sum_probs=29.8
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+||+|||||++|+++|++|+++|. +|+|+|
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE 35 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLD 35 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCCEEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEe
Confidence 4699999999999999999999998 999999
No 213
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.62 E-value=2.7e-07 Score=84.79 Aligned_cols=70 Identities=11% Similarity=0.042 Sum_probs=47.4
Q ss_pred ccceeeeeeecc--ccCCccchhhhcc-Cc-ce--eeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 75 LHTPYLVLAKAR--FLLPTLECQEVYH-DG-RF--YDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 75 ~~~p~~v~~~~~--~~~~~~~~~~~~~-~~-~~--~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
....|.||+|+| +.+..+..++... .. .+ .+... .....+.+|+|||+|.+|+..|..|++.|.+|++++
T Consensus 152 ~~~~d~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~-~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~ 227 (464)
T 2xve_A 152 SEEFDYVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRD-ALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISC 227 (464)
T ss_dssp EEEESEEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCC-GGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEE
T ss_pred EEEcCEEEECCCCCCCCccCCCCCcccCCceEEehhhhCC-HhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEE
Confidence 456899999999 5554444433322 11 11 11111 111134589999999999999999999999999999
No 214
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.61 E-value=5.8e-08 Score=89.11 Aligned_cols=61 Identities=18% Similarity=0.272 Sum_probs=57.9
Q ss_pred cceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHH
Q psy7665 3 LPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWI 63 (296)
Q Consensus 3 ~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~ 63 (296)
+|+++|+++++|||++++|++++|+|+.++++|+++.+.++|.+++++|||++|.+...+.
T Consensus 389 ~kl~~d~~~~~ilG~~~vg~~a~e~i~~~~~ai~~~~~~~~l~~~~~~~Pt~~e~~~~a~~ 449 (458)
T 1lvl_A 389 VRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGEAVQEAAL 449 (458)
T ss_dssp EEEEEETTTCBEEEEEEEETTGGGHHHHHHHHHHHTCBHHHHHTSCCCTTCTTHHHHHHHH
T ss_pred EEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCcCCCCCHHHHHHHHHH
Confidence 6889999999999999999999999999999999999999999999999999999977764
No 215
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.60 E-value=3.3e-07 Score=83.71 Aligned_cols=70 Identities=9% Similarity=-0.051 Sum_probs=46.4
Q ss_pred ccceeeeeeeccc--cCCccchhhhcc------Ccce--eeccccCCCCccccEEEECCChHHHHHHHHHHhCCCc-EEE
Q psy7665 75 LHTPYLVLAKARF--LLPTLECQEVYH------DGRF--YDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKK-VAL 143 (296)
Q Consensus 75 ~~~p~~v~~~~~~--~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~-V~i 143 (296)
....|.||+++|+ .+..+..++... .... .+... .....+.+|+|||+|.+|++.|..|++.|.+ |++
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~-~~~~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l 241 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFRE-PELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQ 241 (447)
T ss_dssp EEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCC-GGGGTTCCEEEECSSHHHHHHHHHHTTTSCSSEEE
T ss_pred EEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCC-hhhcCCCEEEEEccCcCHHHHHHHHHHHhCCcEEE
Confidence 3568999999997 443333333221 0011 11111 1111345899999999999999999999999 999
Q ss_pred Ee
Q psy7665 144 FD 145 (296)
Q Consensus 144 iE 145 (296)
++
T Consensus 242 ~~ 243 (447)
T 2gv8_A 242 SL 243 (447)
T ss_dssp EC
T ss_pred Ee
Confidence 99
No 216
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.59 E-value=7e-07 Score=77.12 Aligned_cols=70 Identities=17% Similarity=0.218 Sum_probs=46.9
Q ss_pred ccceeeeeeeccccCCccchhhhcc--Cccee--eccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYH--DGRFY--DYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+.+|.+|+++|..+..++.++... ..... ...... .....+|+|||+|++|+++|..|++.|.+|++++
T Consensus 101 ~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~ 174 (310)
T 1fl2_A 101 VLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPHCDGP-LFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLE 174 (310)
T ss_dssp EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGG-GGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEEC
T ss_pred EEEeCEEEECcCCCcCCCCCCChhhcccceeEEeccCcHh-hcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEE
Confidence 4678899999997654444333221 01111 001111 1134589999999999999999999999999999
No 217
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.59 E-value=1e-06 Score=81.65 Aligned_cols=32 Identities=38% Similarity=0.529 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
.+||+|||||.+|+++|+.|+++|++|+|+|+
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~ 34 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEA 34 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEEC
Confidence 47999999999999999999999999999993
No 218
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.57 E-value=4.8e-07 Score=78.31 Aligned_cols=70 Identities=20% Similarity=0.185 Sum_probs=47.4
Q ss_pred ccceeeeeeeccccCCccchhhhcc---Ccc-eeeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYH---DGR-FYDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+.+|.+|+++|..+..++.++... ... .....+.. .....+|+|||+|+.|+++|..|++.|.+|++++
T Consensus 111 ~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~-~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~ 184 (323)
T 3f8d_A 111 EFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVADAP-LFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIH 184 (323)
T ss_dssp EEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHHGG-GGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEEC
T ss_pred EEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCCHh-HcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEE
Confidence 4568899999997755444333221 111 01111111 1234589999999999999999999999999999
No 219
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.56 E-value=1.5e-06 Score=79.33 Aligned_cols=32 Identities=28% Similarity=0.396 Sum_probs=30.6
Q ss_pred ccccEEEECCChHHHHHHHHHHhCC-CcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMN-KKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G-~~V~iiE 145 (296)
..+||+|||||++|+++|++|+++| .+|+|+|
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE 54 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVD 54 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEc
Confidence 4689999999999999999999999 9999999
No 220
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.56 E-value=4.3e-07 Score=86.78 Aligned_cols=32 Identities=19% Similarity=0.453 Sum_probs=30.6
Q ss_pred ccccEEEECCChHHHHHHHHHHh-CCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAAS-MNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~-~G~~V~iiE 145 (296)
..+||+||||||+|+++|..|++ .|.+|+|||
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viE 63 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVE 63 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEe
Confidence 45799999999999999999999 999999999
No 221
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.56 E-value=3.9e-07 Score=84.66 Aligned_cols=32 Identities=22% Similarity=0.332 Sum_probs=30.1
Q ss_pred cccEEEECCChHHHHHHHHHHh---CCCcEEEEec
Q psy7665 115 DYDLCVIGGGSGGISAAKEAAS---MNKKVALFDF 146 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~---~G~~V~iiE~ 146 (296)
.+||+|||||++|+++|+.|++ .|.+|+|||+
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~ 36 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVES 36 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEec
Confidence 3699999999999999999999 9999999993
No 222
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.56 E-value=8.2e-07 Score=77.12 Aligned_cols=69 Identities=17% Similarity=0.130 Sum_probs=45.6
Q ss_pred cceeeeeeeccccCCccchhhhccC--cce--eeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 76 HTPYLVLAKARFLLPTLECQEVYHD--GRF--YDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 76 ~~p~~v~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+.+|.+|+++|..+..++.+..... ... ....... .....+|+|||+|+.|++.|..|++.|.+|++++
T Consensus 113 ~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~-~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~ 185 (319)
T 3cty_A 113 YHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTCDGY-LFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIE 185 (319)
T ss_dssp EEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGG-GGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEEC
T ss_pred EEeCEEEECCCCCcccCCCCChHHhCCceEEEEEecchh-hcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEE
Confidence 4678999999976554443322110 001 0001111 1123589999999999999999999999999999
No 223
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.55 E-value=2e-07 Score=80.66 Aligned_cols=72 Identities=15% Similarity=0.085 Sum_probs=49.0
Q ss_pred eccceeeeeeeccccCCccchhhhccC--ccee--ecccc-CCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 74 KLHTPYLVLAKARFLLPTLECQEVYHD--GRFY--DYLDN-NFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 74 ~~~~p~~v~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~-~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..+..+.+|+|+|+.+..++.++.... .... ..... .......+|+|||||..|+++|..|++.|.+|++++
T Consensus 106 ~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~ 182 (314)
T 4a5l_A 106 KEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILH 182 (314)
T ss_dssp CEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEEC
T ss_pred eEEEEeEEEEcccccccccCCCccccccccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeec
Confidence 345678999999987665555443311 1111 11111 111134589999999999999999999999999999
No 224
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.55 E-value=4.6e-07 Score=78.34 Aligned_cols=70 Identities=17% Similarity=0.097 Sum_probs=46.6
Q ss_pred ccceeeeeeeccccCCccchhhhcc--Ccce--eeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYH--DGRF--YDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|.+|+++|..+..++.++... .... ....... .....+|+|||+|+.|+++|..|++.|.+|++++
T Consensus 100 ~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~ 173 (311)
T 2q0l_A 100 TFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCDGF-FYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIH 173 (311)
T ss_dssp EEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHHGG-GGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEEC
T ss_pred EEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCChh-hcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEe
Confidence 4678899999997655444333211 0001 0011111 1123589999999999999999999999999999
No 225
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.55 E-value=3.9e-07 Score=82.89 Aligned_cols=70 Identities=23% Similarity=0.141 Sum_probs=48.4
Q ss_pred ccceeeeeeeccccCCccchhhhcc-----Cc---ceeec--cccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEE
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYH-----DG---RFYDY--LDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALF 144 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~-----~~---~~~~~--~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~ii 144 (296)
.+.+|.+++++|..+..++.++... .. ...+. +... .....+|+|||||+.|+++|..|++.|.+|+++
T Consensus 100 ~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~-l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv 178 (431)
T 1q1r_A 100 ALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQ-LIADNRLVVIGGGYIGLEVAATAIKANMHVTLL 178 (431)
T ss_dssp EEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHT-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHH-hhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEE
Confidence 4678999999998766555443221 11 11111 1111 012458999999999999999999999999999
Q ss_pred e
Q psy7665 145 D 145 (296)
Q Consensus 145 E 145 (296)
|
T Consensus 179 ~ 179 (431)
T 1q1r_A 179 D 179 (431)
T ss_dssp C
T ss_pred E
Confidence 9
No 226
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.55 E-value=9.6e-07 Score=76.78 Aligned_cols=70 Identities=17% Similarity=0.234 Sum_probs=46.6
Q ss_pred cceeeeeeeccc---cCCccchhhhcc--CcceeeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 76 HTPYLVLAKARF---LLPTLECQEVYH--DGRFYDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 76 ~~p~~v~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+.+|.+|+++|. .+..++.++... .......+.........+|+|||+|+.|+++|..|++.|.+|++++
T Consensus 110 ~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~ 184 (332)
T 3lzw_A 110 HYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHYFVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIH 184 (332)
T ss_dssp EEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEESSCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEEC
T ss_pred EEeCEEEECCCCCcCCCCCCCCCChhhccCceEEEecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEE
Confidence 458899999998 554444433322 0111111111101124589999999999999999999999999999
No 227
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.55 E-value=1.2e-07 Score=87.36 Aligned_cols=62 Identities=27% Similarity=0.309 Sum_probs=58.1
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLSWI 63 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~~~ 63 (296)
.+|+++|+++++|||++++|++++|+|+.++.+|+++.+.+++.+++++|||++|.+...+.
T Consensus 408 ~~k~~~~~~~~~ilG~~~~g~~a~~~i~~~~~~i~~~~~~~~l~~~~~~~Pt~~e~~~~~~~ 469 (478)
T 1v59_A 408 FVKILIDSKTERILGAHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAFKEANM 469 (478)
T ss_dssp EEEEEEETTTCBEEEEEEEETTHHHHHHHHHHHHHTTCBHHHHHTSCCCTTCTTHHHHHHHH
T ss_pred EEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHhhCCCCCCCHHHHHHHHHH
Confidence 36889998899999999999999999999999999999999999999999999999977654
No 228
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.54 E-value=8.9e-07 Score=78.28 Aligned_cols=134 Identities=17% Similarity=0.230 Sum_probs=79.4
Q ss_pred ccceeeeeeeccc---cCCccchhh-hcc--CcceeeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEeccC
Q psy7665 75 LHTPYLVLAKARF---LLPTLECQE-VYH--DGRFYDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVT 148 (296)
Q Consensus 75 ~~~p~~v~~~~~~---~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~ 148 (296)
.+..|.+|+++|. .+..++.++ ... ...+...+.........+|+|||+|++|+++|..|++.|.+|++++ +
T Consensus 117 ~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~--~ 194 (360)
T 3ab1_A 117 VYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVH--R 194 (360)
T ss_dssp EEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEEC--S
T ss_pred EEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEE--c
Confidence 3567889999997 333333333 111 1011111111101124589999999999999999999999999999 4
Q ss_pred CCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcEE
Q psy7665 149 PSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDY 228 (296)
Q Consensus 149 ~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 228 (296)
.+ .+.. . +.. ...+...+++.++++
T Consensus 195 ~~------~~~~-----------------------------------~---~~~-----------~~~l~~~~~~~gv~i 219 (360)
T 3ab1_A 195 GH------EFQG-----------------------------------H---GKT-----------AHEVERARANGTIDV 219 (360)
T ss_dssp SS------SCSS-----------------------------------C---SHH-----------HHSSHHHHHHTSEEE
T ss_pred CC------CCCC-----------------------------------C---HHH-----------HHHHHHHhhcCceEE
Confidence 33 1100 0 001 111233455678999
Q ss_pred EcceE-EEE--eCC---EEEE---cceeEEEEeCeEEEcCCCCCCC
Q psy7665 229 FNAKA-VFV--DKH---RVKF---AGEERTVSAQNFIIAVGGRPTY 265 (296)
Q Consensus 229 ~~~~~-~~~--~~~---~v~v---~g~~~~~~a~~vV~AtG~~p~~ 265 (296)
+.+.. ... +.. .+.+ +|+...+.+|.||+|+|..|..
T Consensus 220 ~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~ 265 (360)
T 3ab1_A 220 YLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNL 265 (360)
T ss_dssp ESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSC
T ss_pred EcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCH
Confidence 88743 222 222 3444 3444678999999999988765
No 229
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.53 E-value=5.4e-08 Score=89.61 Aligned_cols=60 Identities=12% Similarity=0.022 Sum_probs=48.3
Q ss_pred CcceeecCCCCeEEEEEEEcC---ChhHHHHHHHHHHHcCCCHHHHccCcCCC-CChHHHHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSN---NAGEITQGYALGVMLGAYKQDFDALIGIH-PTCAEAISLS 61 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~---~a~e~i~~~~~~~~~~~~k~~l~~~i~~~-pt~~e~l~v~ 61 (296)
.+|+|+|++|++|||+|++|+ .++|+|+.++++|+++++.++|.+++++| |+++|.+...
T Consensus 387 ~~kli~~~~~~~ilG~~~~g~~~~~~~~~i~~~~~ai~~~~t~~~l~~~~~~~~P~~~~~~~~~ 450 (472)
T 3iwa_A 387 TLQLVVDRPTRRVLGIQGFSTLGDALTARINAVATMLASKPTVEDISNAEVVYSPPFASAMDIV 450 (472)
T ss_dssp EEEEEEETTTCBEEEEEEEESCHHHHHHHHHHHHHHHTTCCBHHHHHTCCCC--------CCHH
T ss_pred EEEEEEECCCCEEEEEEEECCCcccHHHHHHHHHHHHHcCCCHHHHhcccccCCCCCCCcccHH
Confidence 368999999999999999999 55999999999999999999999999998 9999976433
No 230
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.53 E-value=7.2e-07 Score=77.84 Aligned_cols=71 Identities=17% Similarity=0.092 Sum_probs=47.1
Q ss_pred ccceeeeeeeccccCCccchhhhccC------ccee--eccccCC-CCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYHD------GRFY--DYLDNNF-QTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~-~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|.+|+++|..+..++.+..... .... ....... .....+|+|||+|+.|+++|..|++.|.+|++++
T Consensus 110 ~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~ 189 (333)
T 1vdc_A 110 AILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIH 189 (333)
T ss_dssp EEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEEC
T ss_pred EEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEe
Confidence 46788999999976554443332220 0110 0111110 0234589999999999999999999999999999
No 231
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.53 E-value=6.7e-08 Score=88.41 Aligned_cols=57 Identities=14% Similarity=0.076 Sum_probs=52.8
Q ss_pred CcceeecCCCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccC-cCCCCChHHHH
Q psy7665 2 SLPKLGGSEVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDAL-IGIHPTCAEAI 58 (296)
Q Consensus 2 ~~~~~~~~~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~-i~~~pt~~e~l 58 (296)
.+|+|+|++|++|||+|++|++|+|+|+.++++|+++.+.++|.++ +.+||+.++.+
T Consensus 373 ~~kli~~~~~~~ilG~~~~g~~a~e~i~~~~~ai~~~~t~~~l~~~~~~~~p~~~~~~ 430 (449)
T 3kd9_A 373 WLKGVVDNETNRLLGVQVVGSDILPRIDTAAAMLMAGFTTKDAFFTDLAYAPPFAPVW 430 (449)
T ss_dssp EEEEEEETTTCBEEEEEEEESSCHHHHHHHHHHHHTTCBHHHHHTCCCCCBTTTBCSS
T ss_pred EEEEEEECCCCEEEEEEEEChHHHHHHHHHHHHHHcCCcHHHHhhcccccCCCCCCch
Confidence 3789999999999999999999999999999999999999999998 56889998755
No 232
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.53 E-value=2.1e-06 Score=80.96 Aligned_cols=33 Identities=36% Similarity=0.563 Sum_probs=30.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
..+||+|||||.+|+.+|+.|+++|++|+|+|+
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~ 63 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEM 63 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC
Confidence 357999999999999999999999999999993
No 233
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.52 E-value=7.2e-08 Score=91.46 Aligned_cols=59 Identities=41% Similarity=0.677 Sum_probs=54.4
Q ss_pred cceeecC-CCCeEEEEEEEcCChhHHHHHHHHHHHcCCCHHHHccCcCCCCChHHHHHHH
Q psy7665 3 LPKLGGS-EVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAISLS 61 (296)
Q Consensus 3 ~~~~~~~-~~~~ilG~~~~g~~a~e~i~~~~~~~~~~~~k~~l~~~i~~~pt~~e~l~v~ 61 (296)
+|+++|+ ++++|||+|++|++|+|+|+.++++|+++++.++|.+.+++|||++|.+...
T Consensus 522 ~kli~~~~~~~~ilG~~~~g~~a~~~i~~~~~ai~~~~t~~~l~~~~~~hPt~~e~~~~~ 581 (598)
T 2x8g_A 522 MKLVCRKSDNMRVLGLHVLGPNAGEITQGYAVAIKMGATKADFDRTIGIHPTCSETFTTL 581 (598)
T ss_dssp EEEEEETTTTTEEEEEEEESTTHHHHHHHHHHHHHTTCBHHHHHHSCCCSSCSGGGGGSC
T ss_pred EEEEEecCCCCEEEEEEEECCCHHHHHHHHHHHHHcCCCHHHHhhccccCCCHHHHHHHH
Confidence 5888985 6899999999999999999999999999999999999999999999977533
No 234
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.51 E-value=6.6e-07 Score=78.04 Aligned_cols=71 Identities=15% Similarity=0.074 Sum_probs=47.1
Q ss_pred ccceeeeeeeccccCCccchhhhcc--Cccee--eccccC-CCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYH--DGRFY--DYLDNN-FQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~-~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|.+|+++|..+..+..++... ...+. ...... ......+|+|||+|++|+++|..|++.|.+|++++
T Consensus 128 ~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~ 203 (338)
T 3itj_A 128 PVTTDAIILATGASAKRMHLPGEETYWQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLV 203 (338)
T ss_dssp CEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEEC
T ss_pred EEEeCEEEECcCCCcCCCCCCCchhccCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEE
Confidence 4578899999997655444333221 11111 000111 01134589999999999999999999999999999
No 235
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.51 E-value=5e-07 Score=77.99 Aligned_cols=70 Identities=14% Similarity=0.060 Sum_probs=47.3
Q ss_pred ccceeeeeeeccccCCccchhhhccC--ccee--eccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYHD--GRFY--DYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+.+|.+++++|..+..+..++.... .... ...... .....+|+|||+|+.|+++|..|++.|.+|++++
T Consensus 104 ~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~ 177 (315)
T 3r9u_A 104 TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATCDGF-FYKNKEVAVLGGGDTALEEALYLANICSKIYLIH 177 (315)
T ss_dssp EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHHHGG-GGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEEC
T ss_pred EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeeccccc-ccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEE
Confidence 46788999999986554444333210 1111 011111 1134589999999999999999999999999999
No 236
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.51 E-value=5.9e-06 Score=77.35 Aligned_cols=71 Identities=15% Similarity=0.198 Sum_probs=45.8
Q ss_pred ccceeeeeeecc--ccCCccchhhhcc--Ccce--eecccc------CCCCccccEEEECCChHHHHHHHHHHhCCCcEE
Q psy7665 75 LHTPYLVLAKAR--FLLPTLECQEVYH--DGRF--YDYLDN------NFQTYDYDLCVIGGGSGGISAAKEAASMNKKVA 142 (296)
Q Consensus 75 ~~~p~~v~~~~~--~~~~~~~~~~~~~--~~~~--~~~~~~------~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~ 142 (296)
.+..|.+|+++| +.+..+..++.+. .... ...... .....+.+|+|||+|++|+++|..|++.+.+|+
T Consensus 133 ~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vt 212 (545)
T 3uox_A 133 VVTCRFLISATGPLSASRMPDIKGIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELY 212 (545)
T ss_dssp EEEEEEEEECCCSCBC---CCCTTGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEE
T ss_pred EEEeCEEEECcCCCCCCcCCCCCCccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEE
Confidence 357899999999 5544444444332 1001 011110 011244689999999999999999999999999
Q ss_pred EEe
Q psy7665 143 LFD 145 (296)
Q Consensus 143 iiE 145 (296)
+++
T Consensus 213 v~~ 215 (545)
T 3uox_A 213 VFQ 215 (545)
T ss_dssp EEE
T ss_pred EEE
Confidence 999
No 237
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.50 E-value=1.6e-07 Score=84.21 Aligned_cols=30 Identities=27% Similarity=0.476 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
+|+||||||+|+++|..|++.|++|+|||+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEec
Confidence 799999999999999999999999999993
No 238
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.49 E-value=8.3e-07 Score=83.28 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=30.3
Q ss_pred cccEEEECCChHHHHHHHHHHh---CCCcEEEEec
Q psy7665 115 DYDLCVIGGGSGGISAAKEAAS---MNKKVALFDF 146 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~---~G~~V~iiE~ 146 (296)
.+||+|||||++|+++|..|++ .|.+|+|||+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~ 59 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQA 59 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeC
Confidence 5799999999999999999999 9999999993
No 239
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.49 E-value=6.7e-08 Score=89.47 Aligned_cols=39 Identities=28% Similarity=0.408 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCee
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTC 162 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~ 162 (296)
++|||||||++||+||.+|+++|++|+|+| +.+ .+||.+
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlE--a~~------~~GG~~ 40 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLE--QRD------KPGGRA 40 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEC--CC-------------
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEc--cCC------CCCCcE
Confidence 389999999999999999999999999999 777 566643
No 240
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.47 E-value=1.9e-06 Score=74.63 Aligned_cols=70 Identities=16% Similarity=0.108 Sum_probs=48.8
Q ss_pred ccceeeeeeeccccCCccchhhhccC--ccee--eccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYHD--GRFY--DYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|.+|+++|+.+..+++++.... .... ...+.. ...+.+|+|||||+.|+++|..|++.|.+|+|+|
T Consensus 102 ~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~~~~~~-~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~ 175 (312)
T 4gcm_A 102 ELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGA-FFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVH 175 (312)
T ss_dssp EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHHHGG-GGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEEC
T ss_pred EEEeceeEEcccCccCcCCCCChhhhCCccEEeeeccCcc-ccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEe
Confidence 35679999999987766655543321 1111 111111 1123489999999999999999999999999999
No 241
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.46 E-value=6.8e-07 Score=78.29 Aligned_cols=70 Identities=20% Similarity=0.174 Sum_probs=47.0
Q ss_pred ccceeeeeeeccccCCccchhhhccC--cceee--ccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYHD--GRFYD--YLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+.+|.+|+++|..+..++.++.... ..+.. ..... .....+|+|||+|+.|+++|..|++.|.+|++++
T Consensus 112 ~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~~~~~-~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~ 185 (335)
T 2a87_A 112 THRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGF-FFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVH 185 (335)
T ss_dssp EEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHHHHGG-GGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEEC
T ss_pred EEEeCEEEECCCCCccCCCCCchHhccCCceEEeeccchh-hcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEE
Confidence 46789999999976554443332210 11110 01110 1124589999999999999999999999999999
No 242
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.46 E-value=5.9e-07 Score=83.31 Aligned_cols=135 Identities=19% Similarity=0.222 Sum_probs=82.8
Q ss_pred ccceeeeeeeccccCCccchhhhccCc-ce---ee------cc----------ccC--CCCccccEEEECCChHHHHHHH
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYHDG-RF---YD------YL----------DNN--FQTYDYDLCVIGGGSGGISAAK 132 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~~~-~~---~~------~~----------~~~--~~~~~~dVvVIGgG~aG~~aA~ 132 (296)
.+.+|.+++|+|+.+....+++..... .+ .+ .+ ... .......++|||||+.|+++|.
T Consensus 155 ~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~ 234 (502)
T 4g6h_A 155 EIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAG 234 (502)
T ss_dssp EEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHH
T ss_pred EEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHH
Confidence 356899999999877766655533211 00 00 00 000 0001236999999999999999
Q ss_pred HHHhCC--------------CcEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCC
Q psy7665 133 EAASMN--------------KKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFT 198 (296)
Q Consensus 133 ~l~~~G--------------~~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 198 (296)
.|++.+ .+|+++| ..+ .+-. .++
T Consensus 235 ~l~~~~~~~l~~~~~~~~~~~~V~lve--~~~------~il~-----------------------------------~~~ 271 (502)
T 4g6h_A 235 ELQDYVHQDLRKFLPALAEEVQIHLVE--ALP------IVLN-----------------------------------MFE 271 (502)
T ss_dssp HHHHHHHHTHHHHCHHHHHHCEEEEEC--SSS------SSST-----------------------------------TSC
T ss_pred HHHHHHHHHHHhhcccccccceeEEec--ccc------cccc-----------------------------------CCC
Confidence 987643 6799999 443 1100 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEcceEE-EEeCCEEEE-----cce--eEEEEeCeEEEcCCCCCC
Q psy7665 199 WKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAV-FVDKHRVKF-----AGE--ERTVSAQNFIIAVGGRPT 264 (296)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~v~v-----~g~--~~~~~a~~vV~AtG~~p~ 264 (296)
..+...+.+.|++.||+++.++.. ..+...+.+ ++. ..++.||.||.|+|.+|+
T Consensus 272 ------------~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 272 ------------KKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp ------------HHHHHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECC
T ss_pred ------------HHHHHHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCC
Confidence 122233456678889999987653 355555544 232 257999999999998764
No 243
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.43 E-value=1.7e-07 Score=85.91 Aligned_cols=41 Identities=29% Similarity=0.367 Sum_probs=36.6
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCee
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTC 162 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~ 162 (296)
..+||+|||||++||.||..|++.|++|+|+| +++ .+||.+
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE--~~~------~~GG~~ 50 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHID--KQD------HYGGEA 50 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSS------SSCGGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEe--CCC------CCCccc
Confidence 45799999999999999999999999999999 777 666654
No 244
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.43 E-value=2.7e-06 Score=81.59 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=30.9
Q ss_pred ccccEEEECCChHHHHHHHHHHh-----CCCcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAAS-----MNKKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~-----~G~~V~iiE~ 146 (296)
..+||+||||||+|+++|..|++ .|.+|+|||+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~ 44 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDK 44 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeC
Confidence 35799999999999999999999 9999999993
No 245
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.42 E-value=4e-06 Score=78.61 Aligned_cols=70 Identities=16% Similarity=0.136 Sum_probs=47.5
Q ss_pred cceeeeeeecc--ccCCccchhhhccC--cce--eeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 76 HTPYLVLAKAR--FLLPTLECQEVYHD--GRF--YDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 76 ~~p~~v~~~~~--~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..|.+|+++| +.+..+..++.+.- ... ...........+.+|+|||+|.+|+++|..|++.+.+|++++
T Consensus 146 i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~ 221 (549)
T 4ap3_A 146 VSARFLVVAAGPLSNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQ 221 (549)
T ss_dssp EEEEEEEECCCSEEECCCCCCTTGGGCCSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEE
T ss_pred EEeCEEEECcCCCCCCCCCCCCCcccCCCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEE
Confidence 57899999999 55554444443321 011 111101111245689999999999999999999999999999
No 246
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.40 E-value=1.6e-06 Score=76.78 Aligned_cols=67 Identities=16% Similarity=0.109 Sum_probs=43.9
Q ss_pred cceeeeeeeccccCCccchhhhccCcceeeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 76 HTPYLVLAKARFLLPTLECQEVYHDGRFYDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 76 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..|.+|+++|..+. +..+. ............. .....+|+|||+|++|+++|..|++.|.+|++++
T Consensus 130 ~~~d~vVlAtG~~~~-p~ip~-~~~~~~~~~~~~~-~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~ 196 (369)
T 3d1c_A 130 YHADYIFVATGDYNF-PKKPF-KYGIHYSEIEDFD-NFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYT 196 (369)
T ss_dssp EEEEEEEECCCSTTS-BCCCS-SSCEEGGGCSCGG-GSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEeCEEEECCCCCCc-cCCCC-CceechhhcCChh-hcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEe
Confidence 567899999997532 11111 1111111111111 1123489999999999999999999999999999
No 247
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.38 E-value=2.4e-07 Score=83.90 Aligned_cols=38 Identities=24% Similarity=0.457 Sum_probs=34.0
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCee
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTC 162 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~ 162 (296)
||+|||||++|++||++|+++|++|+|+| +.+ .+||.+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE--~~~------~~GG~~ 39 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLE--KSA------MIGGRF 39 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEEC--SSS------SSCTTS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEe--CCC------CCCcee
Confidence 89999999999999999999999999999 666 556644
No 248
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.37 E-value=2.6e-07 Score=86.04 Aligned_cols=35 Identities=17% Similarity=0.336 Sum_probs=32.6
Q ss_pred ccccEEEECCChHHHHHHHHHHhCC-CcEEEEeccCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMN-KKVALFDFVTPS 150 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G-~~V~iiE~~~~~ 150 (296)
..+||+|||||++|++||++|++.| ++|+|+| +.+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlE--a~~ 42 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLE--ARD 42 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEEC--SSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEe--CCC
Confidence 4579999999999999999999999 9999999 677
No 249
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.37 E-value=2.9e-07 Score=82.03 Aligned_cols=42 Identities=17% Similarity=0.365 Sum_probs=37.2
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCC-CCCCcccccCCeee
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTP-SQHGTVWGLGGTCV 163 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~-~~~g~~~~~GG~~~ 163 (296)
..+||+|||||++|+.+|+.|+++|++|+|+| +. + .+||.|.
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE--~~~~------~vGGr~~ 85 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILE--ANAN------RVGGRIK 85 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEEC--SCSS------CCBTTCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEe--cccc------ccCCcee
Confidence 45699999999999999999999999999999 66 6 7788664
No 250
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.36 E-value=1.2e-06 Score=87.55 Aligned_cols=72 Identities=14% Similarity=0.052 Sum_probs=48.8
Q ss_pred eccceeeeeeeccccCCccchhhhccCc-----ceeeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 74 KLHTPYLVLAKARFLLPTLECQEVYHDG-----RFYDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 74 ~~~~p~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..+.+|.+|+|+|+.+..++.++..... .+.+++.......+..|+|||+|+.|+++|..|++.|.+|+|+|
T Consensus 238 ~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~ 314 (965)
T 2gag_A 238 WHIRAKQVVLATGAHERPIVFENNDRPGIMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVID 314 (965)
T ss_dssp EEEEEEEEEECCCEEECCCCCBTCCSTTEEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEE
T ss_pred EEEECCEEEECCCCccCCCCCCCCCCCCEEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEE
Confidence 3578899999999865444433322111 11122221111123589999999999999999999999999999
No 251
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.35 E-value=3.4e-07 Score=82.19 Aligned_cols=41 Identities=27% Similarity=0.503 Sum_probs=36.4
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCee
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTC 162 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~ 162 (296)
..+||+|||||++|+++|++|++.|.+|+|+| +.+ .+||.|
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E--~~~------~~GG~~ 68 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVD--RRP------HIGGNA 68 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSS------SSSGGG
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEe--ccC------CCCCcc
Confidence 56899999999999999999999999999999 666 566655
No 252
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.35 E-value=3.8e-07 Score=82.51 Aligned_cols=35 Identities=17% Similarity=0.400 Sum_probs=32.3
Q ss_pred ccccEEEECCChHHHHHHHHHHhCC-CcEEEEeccCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMN-KKVALFDFVTPS 150 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G-~~V~iiE~~~~~ 150 (296)
..+||+|||||++|++||++|++.| ++|+|+| +.+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E--~~~ 40 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILE--RTD 40 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEEC--SSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEE--CCC
Confidence 3469999999999999999999999 9999999 667
No 253
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.34 E-value=3.6e-07 Score=83.61 Aligned_cols=57 Identities=7% Similarity=0.128 Sum_probs=53.3
Q ss_pred cceeecCCCCeEEEEEEEcC-ChhHHHHHHHHHHHcCCCHHHHccC-cCCCCChHHHHH
Q psy7665 3 LPKLGGSEVSTFITAEISSN-NAGEITQGYALGVMLGAYKQDFDAL-IGIHPTCAEAIS 59 (296)
Q Consensus 3 ~~~~~~~~~~~ilG~~~~g~-~a~e~i~~~~~~~~~~~~k~~l~~~-i~~~pt~~e~l~ 59 (296)
+|+++|+++++|||+|++|+ +++|+|+.++++|+++.+.+++... +++|||++|.+.
T Consensus 376 ~k~~~~~~~~~ilG~~~~g~~~~~~~i~~~~~ai~~~~~~~~l~~~~~~~~Pt~~e~~~ 434 (452)
T 2cdu_A 376 MSLVYDPKTRVILGGALSSMHDVSQSANVLSVCIQNKNTIDDLAMVDMLFQPQFDRPFN 434 (452)
T ss_dssp EEEEECTTTCBEEEEEEEESSCCHHHHHHHHHHHHTTCBHHHHHHSCCCCCTTTCCSSC
T ss_pred EEEEEECCCCEEEEEEEEcCccHHHHHHHHHHHHHcCCCHHHHhhhhhccCCCCCchHH
Confidence 68899998999999999999 8999999999999999999999986 899999998653
No 254
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.34 E-value=3.4e-06 Score=78.62 Aligned_cols=70 Identities=17% Similarity=0.214 Sum_probs=46.8
Q ss_pred ccceeeeeeeccccCCccchhhhcc--Cccee--eccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYH--DGRFY--DYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+.++.+|+++|..+..+..++... ..... ...... .....+|+|||||.+|+++|..|++.|.+|++++
T Consensus 312 ~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~~~-~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~ 385 (521)
T 1hyu_A 312 VLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCDGP-LFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLE 385 (521)
T ss_dssp EEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCCGG-GGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEEC
T ss_pred EEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCchh-hcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEE
Confidence 3568899999997655444333221 00111 011111 1134589999999999999999999999999999
No 255
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.34 E-value=3.3e-07 Score=82.52 Aligned_cols=40 Identities=30% Similarity=0.614 Sum_probs=35.5
Q ss_pred cccEEEECCChHHHHHHHHHHhC-CCcEEEEeccCCCCCCcccccCCee
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASM-NKKVALFDFVTPSQHGTVWGLGGTC 162 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~-G~~V~iiE~~~~~~~g~~~~~GG~~ 162 (296)
.+||+|||||++|+.+|++|++. |++|+|+| +.+ .+||.|
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E--~~~------~~GG~~ 47 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLE--RRP------HIGGNA 47 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEEC--SSS------SSSGGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEe--CCC------CCCCee
Confidence 57999999999999999999999 99999999 666 566655
No 256
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.33 E-value=4.1e-07 Score=84.71 Aligned_cols=34 Identities=29% Similarity=0.522 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCC
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPS 150 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~ 150 (296)
.+||+|||||++|++||++|++.|++|+|+| +.+
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE--~~~ 37 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLE--ARD 37 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEEC--SSS
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEe--CCC
Confidence 4699999999999999999999999999999 666
No 257
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.31 E-value=4e-07 Score=83.64 Aligned_cols=33 Identities=27% Similarity=0.484 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC--cEEEEeccCCC
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK--KVALFDFVTPS 150 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE~~~~~ 150 (296)
+||+|||||.+|++||++|+++|. +|+|+| +.+
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlE--a~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVE--SSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEEC--SSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEe--CCC
Confidence 599999999999999999999999 999999 666
No 258
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.30 E-value=4.9e-07 Score=82.53 Aligned_cols=35 Identities=23% Similarity=0.474 Sum_probs=32.4
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPS 150 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~ 150 (296)
..+||+|||||++|++||++|++.|++|+|+| +.+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E--~~~ 38 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIE--ARD 38 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEE--CCC
Confidence 35799999999999999999999999999999 666
No 259
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.30 E-value=2.3e-06 Score=79.20 Aligned_cols=135 Identities=19% Similarity=0.202 Sum_probs=80.4
Q ss_pred ccceeeeeeeccccCCccchhhh------ccCcce---eec--cccCCCCccccEEEECCChHHHHHHHHHHh----CCC
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEV------YHDGRF---YDY--LDNNFQTYDYDLCVIGGGSGGISAAKEAAS----MNK 139 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~------~~~~~~---~~~--~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~----~G~ 139 (296)
.+.+|.+++|+|+.+..++.... .....+ .+. +... .....+|+|||||+.|+++|..|++ .|.
T Consensus 130 ~i~yd~lviATGs~p~~~~~~~~~~~~~~~~v~~~~~~~d~~~l~~~-~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~ 208 (493)
T 1m6i_A 130 QITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKI-SREVKSITIIGGGFLGSELACALGRKARALGT 208 (493)
T ss_dssp EEEEEEEEECCCEEECCCHHHHTSCHHHHHTEEECCSHHHHHHHHHH-HHHCSEEEEECCSHHHHHHHHHHHHHHHHHTC
T ss_pred EEECCEEEECCCCCCCCCCCcccccccccCceEEEcCHHHHHHHHHH-hhcCCeEEEECCCHHHHHHHHHHHhhhhhcCC
Confidence 36789999999987665543321 011011 111 1100 0123489999999999999999987 478
Q ss_pred cEEEEeccCCCCCCcccccCCeeeccCCCchhHHHHhhhhHHHhhcccccCccccccCCHHHHHHHHHHHHHHHHHHHHH
Q psy7665 140 KVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEK 219 (296)
Q Consensus 140 ~V~iiE~~~~~~~g~~~~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (296)
+|++++ +.+ ...+ . .++ ..+...+..
T Consensus 209 ~V~~v~--~~~------~~~~-----~-----------------------------~l~------------~~~~~~~~~ 234 (493)
T 1m6i_A 209 EVIQLF--PEK------GNMG-----K-----------------------------ILP------------EYLSNWTME 234 (493)
T ss_dssp EEEEEC--SSS------STTT-----T-----------------------------TSC------------HHHHHHHHH
T ss_pred EEEEEe--cCc------cccc-----c-----------------------------cCC------------HHHHHHHHH
Confidence 899999 332 0000 0 001 011223345
Q ss_pred HHHHCCcEEEcceE-EEE--eCCE--EEE-cceeEEEEeCeEEEcCCCCCCCC
Q psy7665 220 ELEKNKIDYFNAKA-VFV--DKHR--VKF-AGEERTVSAQNFIIAVGGRPTYP 266 (296)
Q Consensus 220 ~~~~~~v~~~~~~~-~~~--~~~~--v~v-~g~~~~~~a~~vV~AtG~~p~~p 266 (296)
.+++.||+++.+.. ..+ +... +++ +| .++.||.||+|+|.+|+..
T Consensus 235 ~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG--~~i~aD~Vv~a~G~~pn~~ 285 (493)
T 1m6i_A 235 KVRREGVKVMPNAIVQSVGVSSGKLLIKLKDG--RKVETDHIVAAVGLEPNVE 285 (493)
T ss_dssp HHHTTTCEEECSCCEEEEEEETTEEEEEETTS--CEEEESEEEECCCEEECCT
T ss_pred HHHhcCCEEEeCCEEEEEEecCCeEEEEECCC--CEEECCEEEECCCCCccHH
Confidence 66778999987743 222 2333 333 55 5799999999999987653
No 260
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.30 E-value=4.6e-07 Score=80.70 Aligned_cols=39 Identities=33% Similarity=0.606 Sum_probs=34.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCee
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTC 162 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~ 162 (296)
+||+|||||++|+.+|.+|++.|++|+|+| +.+ .+||.|
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E--~~~------~~GG~~ 40 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIE--KRN------HIGGNA 40 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEEC--SSS------SSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEe--cCC------CCCcce
Confidence 699999999999999999999999999999 666 566654
No 261
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.27 E-value=6e-07 Score=82.49 Aligned_cols=41 Identities=27% Similarity=0.568 Sum_probs=34.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCee
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTC 162 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~ 162 (296)
..+||+|||||++|++||+.|+++|++|+|+| +.+ .+||.+
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E--~~~------~~GGr~ 55 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLE--SSA------RLGGAV 55 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEEC--SSS------SSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEE--cCC------CCCcee
Confidence 45699999999999999999999999999999 666 566643
No 262
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.26 E-value=7.2e-07 Score=82.32 Aligned_cols=35 Identities=26% Similarity=0.458 Sum_probs=32.5
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPS 150 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~ 150 (296)
..+||+|||||++|++||++|+++|++|+|+| +.+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E--~~~ 44 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLE--ART 44 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEEC--SSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEe--ccC
Confidence 45699999999999999999999999999999 666
No 263
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.26 E-value=6.8e-07 Score=82.58 Aligned_cols=34 Identities=29% Similarity=0.560 Sum_probs=32.1
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCC
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPS 150 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~ 150 (296)
.+||+|||||++|++||++|++.|++|+|+| +.+
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E--~~~ 72 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLE--ARD 72 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEEC--SSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEe--CCC
Confidence 4799999999999999999999999999999 667
No 264
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.25 E-value=4e-07 Score=83.26 Aligned_cols=34 Identities=24% Similarity=0.376 Sum_probs=31.8
Q ss_pred cccEEEECCChHHHHHHHHHHhCC------CcEEEEeccCCC
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMN------KKVALFDFVTPS 150 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G------~~V~iiE~~~~~ 150 (296)
.+||+|||||++|++||++|+++| ++|+|+| +.+
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlE--a~~ 44 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVE--ASP 44 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEEC--SSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEE--CCC
Confidence 469999999999999999999999 9999999 666
No 265
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.22 E-value=6.1e-06 Score=72.24 Aligned_cols=68 Identities=16% Similarity=0.152 Sum_probs=43.2
Q ss_pred cceeeeeeeccc--cCCccchhhhccC--cce--eeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 76 HTPYLVLAKARF--LLPTLECQEVYHD--GRF--YDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 76 ~~p~~v~~~~~~--~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..|.+|+++|. .+..+..++.... ... .+... .......+|+|||+|.+|+++|..|++.| +|+++.
T Consensus 119 ~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~ 192 (357)
T 4a9w_A 119 WLARAVISATGTWGEAYTPEYQGLESFAGIQLHSAHYST-PAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWIT 192 (357)
T ss_dssp EEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEGGGCCC-SGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEEC
T ss_pred EEeCEEEECCCCCCCCCCCCCCCccccCCcEEEeccCCC-hhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEE
Confidence 568899999994 3322333222211 011 11111 11113458999999999999999999998 699998
No 266
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.19 E-value=1.1e-06 Score=81.27 Aligned_cols=35 Identities=26% Similarity=0.443 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCC
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQ 151 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~ 151 (296)
.+||+|||||++|+++|++|++.|++|+|+| +.+.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E--~~~~ 47 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFE--AEGK 47 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEEC--SSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEE--eCCC
Confidence 4699999999999999999999999999999 7773
No 267
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.18 E-value=1.1e-06 Score=80.60 Aligned_cols=34 Identities=26% Similarity=0.436 Sum_probs=31.6
Q ss_pred cccEEEECCChHHHHHHHHHHhCC--CcEEEEeccCCC
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMN--KKVALFDFVTPS 150 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G--~~V~iiE~~~~~ 150 (296)
.+||+|||||++|+++|++|++.| ++|+|+| +.+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E--~~~ 39 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLE--AGE 39 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEEC--SSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEE--CCC
Confidence 469999999999999999999999 9999999 666
No 268
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.17 E-value=1.4e-06 Score=78.07 Aligned_cols=33 Identities=18% Similarity=0.398 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCC
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPS 150 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~ 150 (296)
+||+|||||++|+.+|..|++.|++|+|+| +.+
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E--~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIID--QRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEE--SSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEE--ecC
Confidence 699999999999999999999999999999 666
No 269
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.15 E-value=1.8e-06 Score=79.19 Aligned_cols=41 Identities=22% Similarity=0.348 Sum_probs=36.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCee
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTC 162 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~ 162 (296)
..+||+|||+|++|+.+|..|++.|++|+++| +.+ .+||.+
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e--~~~------~~Gg~~ 59 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLD--RNP------YYGGET 59 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSS------SSCGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEe--ccC------CCCCCc
Confidence 46899999999999999999999999999999 677 677755
No 270
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.15 E-value=2e-06 Score=78.31 Aligned_cols=41 Identities=27% Similarity=0.325 Sum_probs=35.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCee
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTC 162 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~ 162 (296)
..+||+|||||++|+.+|..|++.|++|+++| +.+ .+||.|
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e--~~~------~~gg~~ 45 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMD--RNP------YYGGES 45 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSS------SSCTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEe--cCC------Cccccc
Confidence 45799999999999999999999999999999 666 556654
No 271
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.14 E-value=2e-06 Score=79.43 Aligned_cols=35 Identities=23% Similarity=0.457 Sum_probs=32.2
Q ss_pred ccccEEEECCChHHHHHHHHHHhCC-CcEEEEeccCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMN-KKVALFDFVTPS 150 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G-~~V~iiE~~~~~ 150 (296)
..+||+|||||++|+++|++|+++| .+|+|+| +.+
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E--~~~ 43 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYE--CND 43 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEE--SSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEe--CCC
Confidence 3569999999999999999999998 7999999 666
No 272
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.14 E-value=2.9e-06 Score=75.09 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=30.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
..+||+|||||.+|+++|++|+++|.+|+|+|+
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILAR 37 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEec
Confidence 357999999999999999999999999999993
No 273
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.11 E-value=1.9e-06 Score=79.72 Aligned_cols=35 Identities=23% Similarity=0.425 Sum_probs=32.4
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPS 150 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~ 150 (296)
..+||+|||||++|+++|+.|++.|++|+|+| +.+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE--~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLE--ASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEEC--SSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEE--CCC
Confidence 35699999999999999999999999999999 666
No 274
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.09 E-value=2e-06 Score=78.17 Aligned_cols=33 Identities=12% Similarity=0.280 Sum_probs=30.0
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
+.+||+||||||+|+++|+.|++.|++|+|+|+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~ 53 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTD 53 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcC
Confidence 557999999999999999999999999999994
No 275
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.02 E-value=3.2e-06 Score=74.46 Aligned_cols=44 Identities=20% Similarity=0.157 Sum_probs=34.5
Q ss_pred cEEEECCChHHHHHHHHHHhCC------CcEEEEeccCCC-CCCcccccCCee
Q psy7665 117 DLCVIGGGSGGISAAKEAASMN------KKVALFDFVTPS-QHGTVWGLGGTC 162 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G------~~V~iiE~~~~~-~~g~~~~~GG~~ 162 (296)
||+|||||.+|+++|++|+++| .+|+|+| +.. ..+.+...||.+
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE--~~~~~~~aS~~~~g~~ 52 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYA--DRFTPLTTTDVAAGLW 52 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEE--SSCGGGSGGGTCCCBC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEE--CCCCCCCccccCccee
Confidence 8999999999999999999998 9999999 333 234444445544
No 276
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.00 E-value=4.7e-06 Score=76.57 Aligned_cols=34 Identities=26% Similarity=0.445 Sum_probs=31.2
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC-cEEEEeccCCC
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK-KVALFDFVTPS 150 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE~~~~~ 150 (296)
.+||+|||||++|+.+|++|++.|. +|+|+| +.+
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e--~~~ 38 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILE--ATD 38 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEEC--SSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEe--CCC
Confidence 4699999999999999999999998 899999 666
No 277
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.98 E-value=5.5e-06 Score=78.80 Aligned_cols=35 Identities=34% Similarity=0.588 Sum_probs=31.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPS 150 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~ 150 (296)
..+||+|||||++|+.+|++|++.|++|+|+| +.+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE--~~~ 79 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFD--IGE 79 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEEC--SSC
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEe--ccC
Confidence 45899999999999999999999999999999 555
No 278
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.98 E-value=1.9e-05 Score=72.31 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=29.2
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+.+|+|||||..|+.+|..+.+.|. +|++++
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~ 295 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLY 295 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEE
Confidence 45689999999999999999999997 599999
No 279
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.97 E-value=4.4e-06 Score=74.54 Aligned_cols=29 Identities=21% Similarity=0.386 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHHhC--CCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASM--NKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE 145 (296)
||+|||||++|+++|..|++. |.+|+|+|
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E 32 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVE 32 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEE
Confidence 899999999999999999999 99999999
No 280
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.96 E-value=0.00013 Score=66.83 Aligned_cols=70 Identities=9% Similarity=-0.071 Sum_probs=45.0
Q ss_pred cceeeeeeeccccC-Cccchhhhcc--Ccceeecc---c-------cCCCCccccEEEECCChHHHHHHHHHH-------
Q psy7665 76 HTPYLVLAKARFLL-PTLECQEVYH--DGRFYDYL---D-------NNFQTYDYDLCVIGGGSGGISAAKEAA------- 135 (296)
Q Consensus 76 ~~p~~v~~~~~~~~-~~~~~~~~~~--~~~~~~~~---~-------~~~~~~~~dVvVIGgG~aG~~aA~~l~------- 135 (296)
..+|.+|+|+|+.+ ..+++++... .....+.+ . ........+|+|||+|.+|+++|..|+
T Consensus 93 ~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~ 172 (460)
T 1cjc_A 93 DAYHAVVLSYGAEDHQALDIPGEELPGVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLE 172 (460)
T ss_dssp HHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGT
T ss_pred EEcCEEEEecCcCCCCCCCCCCCCCCcEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhc
Confidence 57899999999874 2233333221 11111111 0 000112458999999999999999999
Q ss_pred -------------hCCC-cEEEEe
Q psy7665 136 -------------SMNK-KVALFD 145 (296)
Q Consensus 136 -------------~~G~-~V~iiE 145 (296)
+.|. +|+|++
T Consensus 173 ~tdi~~~a~~~l~~~g~~~V~lv~ 196 (460)
T 1cjc_A 173 KTDITEAALGALRQSRVKTVWIVG 196 (460)
T ss_dssp TSCCCHHHHHHHHTCCCCEEEEEC
T ss_pred cccccHHHHHHHhhCCCcEEEEEE
Confidence 5686 799999
No 281
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.96 E-value=3.2e-05 Score=77.67 Aligned_cols=30 Identities=23% Similarity=0.273 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+|+|||||..|+++|..+++.|. +|++++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~ 363 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVF 363 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEE
Confidence 389999999999999999999996 899999
No 282
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.96 E-value=6.2e-06 Score=79.07 Aligned_cols=35 Identities=26% Similarity=0.474 Sum_probs=32.7
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPS 150 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~ 150 (296)
..+||+|||||++|+++|.+|++.|++|+|+| +.+
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e--~~~ 140 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLE--ARD 140 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEEC--SSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEe--cCC
Confidence 45799999999999999999999999999999 666
No 283
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.93 E-value=0.00016 Score=66.04 Aligned_cols=70 Identities=13% Similarity=0.029 Sum_probs=44.2
Q ss_pred cceeeeeeecccc-CCccchhhhccC--cceeecc----------ccCCCCccccEEEECCChHHHHHHHHHHhC-----
Q psy7665 76 HTPYLVLAKARFL-LPTLECQEVYHD--GRFYDYL----------DNNFQTYDYDLCVIGGGSGGISAAKEAASM----- 137 (296)
Q Consensus 76 ~~p~~v~~~~~~~-~~~~~~~~~~~~--~~~~~~~----------~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~----- 137 (296)
..+|.+|+|+|+. +..+++++.... ....+.+ .........+|+|||+|.+|+++|..|++.
T Consensus 95 ~~~d~lViAtG~~~~~~~~ipG~~~~gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~ 174 (456)
T 1lqt_A 95 ERYDAVIYAVGAQSDRMLNIPGEDLPGSIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLA 174 (456)
T ss_dssp HHSSEEEECCCCCEECCCCCTTTTSTTEEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHT
T ss_pred EeCCEEEEeeCCCCCCCCCCCCCCCCCcEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhc
Confidence 5789999999985 333333332211 1111110 000011245899999999999999999874
Q ss_pred ---------------C-CcEEEEe
Q psy7665 138 ---------------N-KKVALFD 145 (296)
Q Consensus 138 ---------------G-~~V~iiE 145 (296)
| .+|+|++
T Consensus 175 ~tdi~~~~~~~l~~~g~~~V~lv~ 198 (456)
T 1lqt_A 175 RTDIADHALESLRPRGIQEVVIVG 198 (456)
T ss_dssp TSCCCHHHHHHHTTCCCCEEEEEC
T ss_pred CCCccHHHHHHHHHCCCcEEEEEe
Confidence 5 4899999
No 284
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.89 E-value=9.7e-06 Score=79.50 Aligned_cols=38 Identities=26% Similarity=0.490 Sum_probs=33.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHG 153 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g 153 (296)
..+||+|||||++|+++|++|+++|++|+|+| +.+++|
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E--~~~~~G 314 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLE--ARDRVG 314 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEC--SSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEE--ecCcCC
Confidence 45799999999999999999999999999999 666433
No 285
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.89 E-value=5.1e-05 Score=65.32 Aligned_cols=70 Identities=11% Similarity=0.041 Sum_probs=43.8
Q ss_pred ccceeeeeeeccccCCccchhhhcc--Ccceeec--cccCCCCccccEEEECCCh-HHHHHHHHHHhCCCcEEEEe
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYH--DGRFYDY--LDNNFQTYDYDLCVIGGGS-GGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~dVvVIGgG~-aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|.+|+|+|+.+..++.++... ....... .... ...+.+++|||||. +++++|..+++.|.+|++++
T Consensus 103 ~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~~~~-~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~ 177 (304)
T 4fk1_A 103 KYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYCDGW-ELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIAT 177 (304)
T ss_dssp EEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHHHSG-GGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEEC
T ss_pred EEEeCEEEEccCCccccccccCccccccceeeeccccchh-HhcCCceeeecCCCchhhhHHHHHHhCCceEEEEe
Confidence 4567889999998665555444321 1111111 0111 11234688888886 56789999999999999998
No 286
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.87 E-value=1.6e-05 Score=77.36 Aligned_cols=37 Identities=22% Similarity=0.477 Sum_probs=33.1
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCC
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQH 152 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~ 152 (296)
..+||+|||||++|+++|..|++.|++|+|+| +.+..
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E--~~~~~ 371 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLE--AKDRI 371 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEEC--SSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEe--cccce
Confidence 45799999999999999999999999999999 65633
No 287
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.76 E-value=0.00012 Score=66.56 Aligned_cols=47 Identities=15% Similarity=0.201 Sum_probs=31.9
Q ss_pred HHHHHHHCCcEEEcceE-EEEeCCEEEE-c----ce---eEEEEeCeEEEcCCCCC
Q psy7665 217 YEKELEKNKIDYFNAKA-VFVDKHRVKF-A----GE---ERTVSAQNFIIAVGGRP 263 (296)
Q Consensus 217 ~~~~~~~~~v~~~~~~~-~~~~~~~v~v-~----g~---~~~~~a~~vV~AtG~~p 263 (296)
+...+++.||+++.+.. ..++...+.+ + ++ ..++.+|.+++|+|..+
T Consensus 214 ~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~ 269 (437)
T 3sx6_A 214 LTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKG 269 (437)
T ss_dssp HHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEEC
T ss_pred HHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcC
Confidence 34556778999988754 3345555554 2 21 36789999999999654
No 288
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.74 E-value=1.6e-05 Score=73.90 Aligned_cols=34 Identities=26% Similarity=0.449 Sum_probs=30.5
Q ss_pred ccccEEEECCChHHHHHHHHHHh-CCCcEEEEecc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAAS-MNKKVALFDFV 147 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~-~G~~V~iiE~~ 147 (296)
..||+||||||++||.+|.+|++ .|++|+|+|++
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG 50 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAG 50 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSS
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 47999999999999999999998 67899999944
No 289
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.73 E-value=0.0033 Score=58.65 Aligned_cols=71 Identities=14% Similarity=0.200 Sum_probs=45.6
Q ss_pred ccceeeeeeeccc--cCCccchhhhcc-Ccc-e--eeccccCCCCccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 75 LHTPYLVLAKARF--LLPTLECQEVYH-DGR-F--YDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 75 ~~~p~~v~~~~~~--~~~~~~~~~~~~-~~~-~--~~~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..+.+|+++|. .+..+..++.+. ... + ...........+..|+|||+|.+|+..|..+++.|.+|++++
T Consensus 140 ~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~ 216 (542)
T 1w4x_A 140 RIRARYLIMASGQLSVPQLPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQ 216 (542)
T ss_dssp EEEEEEEEECCCSCCCCCCCCCTTGGGCCSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEE
T ss_pred EEEeCEEEECcCCCCCCCCCCCCCcccCCCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEE
Confidence 3568899999994 332333333221 010 1 011101111235689999999999999999999999999999
No 290
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.70 E-value=2.5e-05 Score=73.10 Aligned_cols=34 Identities=38% Similarity=0.597 Sum_probs=31.6
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEecc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFV 147 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~ 147 (296)
..||+||||+|++|+.+|.+|++.|.+|+|+|++
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g 39 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERG 39 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 5689999999999999999999999999999943
No 291
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.69 E-value=0.0001 Score=66.25 Aligned_cols=46 Identities=13% Similarity=0.041 Sum_probs=33.5
Q ss_pred HHHHHHHCCcEEEcce-EEEEeCCEEEE-cceeEEEEeCeEEEcCCCCCC
Q psy7665 217 YEKELEKNKIDYFNAK-AVFVDKHRVKF-AGEERTVSAQNFIIAVGGRPT 264 (296)
Q Consensus 217 ~~~~~~~~~v~~~~~~-~~~~~~~~v~v-~g~~~~~~a~~vV~AtG~~p~ 264 (296)
+...+++.||+++.+. ...++...+.+ +| .++.+|.||+|+|..|.
T Consensus 224 ~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g--~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 224 VASIYNQLGIKLVHNFKIKEIREHEIVDEKG--NTIPADITILLPPYTGN 271 (409)
T ss_dssp HHHHHHHHTCEEECSCCEEEECSSEEEETTS--CEEECSEEEEECCEECC
T ss_pred HHHHHHHCCCEEEcCCceEEECCCeEEECCC--CEEeeeEEEECCCCCcc
Confidence 3455667799998764 34455666777 56 57999999999997664
No 292
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.62 E-value=2.8e-05 Score=72.66 Aligned_cols=32 Identities=28% Similarity=0.532 Sum_probs=30.3
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
..||+||||||.+||.+|.+|++ |.+|+|+|+
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEa 56 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLER 56 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECS
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEec
Confidence 56899999999999999999999 999999994
No 293
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.57 E-value=4.2e-05 Score=71.95 Aligned_cols=34 Identities=24% Similarity=0.435 Sum_probs=31.1
Q ss_pred ccccEEEECCChHHHHHHHHHHhCC-CcEEEEecc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMN-KKVALFDFV 147 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G-~~V~iiE~~ 147 (296)
..||+||||||.|||.+|.+|++.| .+|+|+|++
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG 39 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAG 39 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecC
Confidence 5689999999999999999999998 699999943
No 294
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.48 E-value=6.9e-05 Score=70.53 Aligned_cols=34 Identities=24% Similarity=0.338 Sum_probs=30.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhC-CCcEEEEecc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASM-NKKVALFDFV 147 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~-G~~V~iiE~~ 147 (296)
..||+||||||.|||.+|.+|++. +.+|+|+|++
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG 52 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESG 52 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSS
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecC
Confidence 569999999999999999999975 7999999944
No 295
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.42 E-value=0.00025 Score=64.15 Aligned_cols=47 Identities=17% Similarity=0.251 Sum_probs=33.2
Q ss_pred HHHHHHHCCcEEEcceE-EEEeCCEEEE-c--ceeEEEEeCeEEEcCCCCC
Q psy7665 217 YEKELEKNKIDYFNAKA-VFVDKHRVKF-A--GEERTVSAQNFIIAVGGRP 263 (296)
Q Consensus 217 ~~~~~~~~~v~~~~~~~-~~~~~~~v~v-~--g~~~~~~a~~vV~AtG~~p 263 (296)
+...+++.||+++.+.. ..++...+++ + ++..++.+|.||+|+|..|
T Consensus 206 l~~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 206 VEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHCCCEEEeCCEEEEEeCCeEEEEecCCCceEEeeeEEEECCCCcc
Confidence 34556778999987654 3355566666 3 2237899999999999765
No 296
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.41 E-value=0.00014 Score=68.86 Aligned_cols=41 Identities=29% Similarity=0.384 Sum_probs=38.4
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEeccCCCCCCcccccCCee
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTC 162 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~~~~~~g~~~~~GG~~ 162 (296)
+.|||+|||+|..|+..|..|++.|++|+++| +++ ..||.|
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id--~~~------~~gg~~ 47 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVD--SRS------YYGGNW 47 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEC--SSS------SSCGGG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEc--CCC------cccCcc
Confidence 46999999999999999999999999999999 777 889976
No 297
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.39 E-value=0.00014 Score=67.28 Aligned_cols=34 Identities=18% Similarity=0.183 Sum_probs=31.5
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEecc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFV 147 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~ 147 (296)
..+|++|||+|++|+.+|.+|++.|.+|+|+|++
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~ 37 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMG 37 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 4689999999999999999999999999999943
No 298
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.36 E-value=8e-05 Score=69.88 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHHHh-CCCcEEEEecc
Q psy7665 115 DYDLCVIGGGSGGISAAKEAAS-MNKKVALFDFV 147 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~-~G~~V~iiE~~ 147 (296)
.||+||||||.+||.+|.+|++ .|.+|+|+|++
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG 35 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAG 35 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSS
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecC
Confidence 4899999999999999999998 78999999943
No 299
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.31 E-value=0.00017 Score=66.77 Aligned_cols=34 Identities=24% Similarity=0.260 Sum_probs=31.7
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEecc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFV 147 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~~ 147 (296)
..+|++|||+|++|+.+|.+|++.|.+|+|+|++
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~ 43 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMG 43 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECC
Confidence 5689999999999999999999999999999943
No 300
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.30 E-value=0.00073 Score=62.48 Aligned_cols=69 Identities=12% Similarity=0.078 Sum_probs=43.1
Q ss_pred cceeeeeeeccccCCccchhhh-----ccCcceee--ccccCCCCccccEEEECCChHHHHHHHHHHhC--CCcEEEEe
Q psy7665 76 HTPYLVLAKARFLLPTLECQEV-----YHDGRFYD--YLDNNFQTYDYDLCVIGGGSGGISAAKEAASM--NKKVALFD 145 (296)
Q Consensus 76 ~~p~~v~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~~~dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE 145 (296)
+....+++++|..|..+..... +...+... .+... ...+.+|+|||+|.+|+..+..|++. +.+|+++-
T Consensus 201 ~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~~~-~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~ 278 (501)
T 4b63_A 201 RRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALLKD-KSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIM 278 (501)
T ss_dssp EEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHSCC-TTSCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred EEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhcccc-ccCCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEe
Confidence 4567788888865443332211 11111111 01111 23456899999999999999999875 67899998
No 301
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.25 E-value=0.00025 Score=66.96 Aligned_cols=34 Identities=26% Similarity=0.419 Sum_probs=31.4
Q ss_pred ccccEEEECCChHHHHHHHHHHh-CCCcEEEEecc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAAS-MNKKVALFDFV 147 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~-~G~~V~iiE~~ 147 (296)
..||++|||+|++|+.+|.+|++ .|.+|+|+|++
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g 57 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKG 57 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecC
Confidence 56899999999999999999999 89999999943
No 302
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.18 E-value=0.00027 Score=66.11 Aligned_cols=34 Identities=32% Similarity=0.493 Sum_probs=31.3
Q ss_pred ccccEEEECCChHHHHHHHHHHhC-CCcEEEEecc
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASM-NKKVALFDFV 147 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~-G~~V~iiE~~ 147 (296)
..+|++|||+|++|+.+|.+|++. |.+|+|+|++
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g 46 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAG 46 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecC
Confidence 468999999999999999999998 8999999943
No 303
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.11 E-value=0.0002 Score=68.60 Aligned_cols=31 Identities=32% Similarity=0.805 Sum_probs=29.4
Q ss_pred cccEEEECCChHHHHHHHHHHhCC--------CcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMN--------KKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G--------~~V~iiE 145 (296)
.++|+|||||++|++||++|++.| ++|+|+|
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E 94 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYE 94 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEe
Confidence 468999999999999999999998 9999999
No 304
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.25 E-value=0.0051 Score=47.17 Aligned_cols=31 Identities=26% Similarity=0.291 Sum_probs=29.3
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
...|+|+|+|..|...|..|.+.|.+|++++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid 49 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVD 49 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 4489999999999999999999999999999
No 305
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.21 E-value=0.007 Score=45.53 Aligned_cols=31 Identities=10% Similarity=0.134 Sum_probs=29.4
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..+|+|+|+|..|...|..|.+.|++|+++|
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid 37 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIE 37 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEE
Confidence 3479999999999999999999999999999
No 306
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=96.15 E-value=0.0063 Score=52.90 Aligned_cols=30 Identities=23% Similarity=0.163 Sum_probs=27.9
Q ss_pred ccEEEECCChHHHH-HHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGIS-AAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~-aA~~l~~~G~~V~iiE 145 (296)
.+|.|||.|.+|++ +|..|.++|++|++.|
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D 35 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCD 35 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEc
Confidence 37999999999996 7889999999999999
No 307
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.97 E-value=0.0078 Score=44.75 Aligned_cols=30 Identities=23% Similarity=0.349 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|+|+|+|..|...|..|.+.|++|+++|
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d 34 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLID 34 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 479999999999999999999999999999
No 308
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.90 E-value=0.0094 Score=44.70 Aligned_cols=30 Identities=33% Similarity=0.582 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..|+|+|+|..|...|..|.+.|++|+++|
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id 36 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVD 36 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEE
Confidence 379999999999999999999999999999
No 309
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.84 E-value=0.011 Score=45.05 Aligned_cols=30 Identities=13% Similarity=0.135 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|+|+|+|..|...|..|.+.|++|+++|
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid 33 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVIS 33 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEE
Confidence 379999999999999999999999999999
No 310
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.64 E-value=0.014 Score=41.91 Aligned_cols=31 Identities=26% Similarity=0.468 Sum_probs=28.9
Q ss_pred cccEEEECCChHHHHHHHHHHhCC-CcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMN-KKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G-~~V~iiE 145 (296)
..+|+|+|+|..|...+..|.+.| ++|++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~ 36 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVAD 36 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEe
Confidence 347999999999999999999999 8999999
No 311
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.53 E-value=0.094 Score=47.12 Aligned_cols=48 Identities=17% Similarity=0.247 Sum_probs=35.2
Q ss_pred HHHHHHHCCcEEEcceE-EEEeCCEEEE---cceeEEEEeCeEEEcCCCCCC
Q psy7665 217 YEKELEKNKIDYFNAKA-VFVDKHRVKF---AGEERTVSAQNFIIAVGGRPT 264 (296)
Q Consensus 217 ~~~~~~~~~v~~~~~~~-~~~~~~~v~v---~g~~~~~~a~~vV~AtG~~p~ 264 (296)
+...+++.||+++.+.. ..++...+.+ ++...++.+|.+|+|+|.+|.
T Consensus 206 l~~~l~~~GV~~~~~~~v~~v~~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~ 257 (430)
T 3hyw_A 206 VEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGP 257 (430)
T ss_dssp HHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECC
T ss_pred HHHHHHhCCeEEEeCceEEEEeCCceEEEeeCCCceEeecceEEEeccCCCc
Confidence 44556788999988755 3356666665 455578999999999997653
No 312
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.32 E-value=0.016 Score=47.32 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=29.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|+|||||.+|...+..|.+.|.+|+|++
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVva 61 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVA 61 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEC
Confidence 34589999999999999999999999999998
No 313
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.30 E-value=0.023 Score=52.22 Aligned_cols=55 Identities=11% Similarity=0.000 Sum_probs=30.9
Q ss_pred ccceeeeeeeccccCCccchhhhccCc--ce---eeccccCCCCccccEEEECCChHHHH
Q psy7665 75 LHTPYLVLAKARFLLPTLECQEVYHDG--RF---YDYLDNNFQTYDYDLCVIGGGSGGIS 129 (296)
Q Consensus 75 ~~~p~~v~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~dVvVIGgG~aG~~ 129 (296)
.+.+|.+++++|+.+..++.+...... .. ..+..........+++|||+|+.|++
T Consensus 205 ~~~~d~lvlAtGa~~~~~~~~g~~~~gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle 264 (493)
T 1y56_A 205 EILAKRVVLATGAIDSTMLFENNDMPGVFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI 264 (493)
T ss_dssp EEEESCEEECCCEEECCCCCTTTTSTTEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH
T ss_pred EEECCEEEECCCCCccCCCCCCCCCCCEEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH
Confidence 567889999999766544433322111 11 11111100112358999999999987
No 314
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.24 E-value=0.018 Score=42.91 Aligned_cols=29 Identities=38% Similarity=0.400 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|+|+|+|..|...|..|.+.|.+|++++
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d 36 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVD 36 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEE
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 69999999999999999999999999999
No 315
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.15 E-value=0.019 Score=45.15 Aligned_cols=30 Identities=20% Similarity=0.189 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHhC-CCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASM-NKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~-G~~V~iiE 145 (296)
.+|+|+|+|..|...|..|.+. |++|+++|
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid 70 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIE 70 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEE
Confidence 4799999999999999999999 99999999
No 316
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.02 E-value=0.015 Score=49.05 Aligned_cols=31 Identities=26% Similarity=0.431 Sum_probs=29.4
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..|+|||||.+|...+..|.+.|.+|+|++
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtVia 43 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVS 43 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEc
Confidence 3479999999999999999999999999999
No 317
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.82 E-value=0.018 Score=52.13 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
.+|+|||.|.+|+++|..|+++|++|+++|.
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~ 36 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDT 36 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEES
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEEC
Confidence 3799999999999999999999999999993
No 318
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.78 E-value=0.027 Score=45.68 Aligned_cols=29 Identities=21% Similarity=0.332 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|+|+|+|..|...|..|.+.|++|+++|
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid 30 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIIN 30 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 69999999999999999999999999999
No 319
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.70 E-value=0.026 Score=51.23 Aligned_cols=31 Identities=26% Similarity=0.314 Sum_probs=29.5
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+.+|.|||.|.+|+++|..|+++|++|++.|
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D 39 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVND 39 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEe
Confidence 3589999999999999999999999999999
No 320
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.68 E-value=0.03 Score=48.31 Aligned_cols=29 Identities=38% Similarity=0.413 Sum_probs=28.5
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|.-|..-|..++..|++|+++|
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G~~V~l~D 36 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYD 36 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred eEEEECCcHHHHHHHHHHHhCCCeEEEEE
Confidence 79999999999999999999999999999
No 321
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.47 E-value=0.039 Score=49.18 Aligned_cols=30 Identities=27% Similarity=0.430 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|+|||+|.+|+.+|..+...|.+|+++|
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D 220 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATD 220 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEc
Confidence 489999999999999999999999999999
No 322
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.41 E-value=0.04 Score=47.55 Aligned_cols=30 Identities=23% Similarity=0.252 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|+|||+|..|...|..|++.|++|++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~ 32 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVS 32 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEe
Confidence 379999999999999999999999999999
No 323
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.30 E-value=0.044 Score=47.10 Aligned_cols=30 Identities=13% Similarity=0.267 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+|..|...|..|++.|++|++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~ 32 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLL 32 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEE
Confidence 379999999999999999999999999999
No 324
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.80 E-value=0.045 Score=45.48 Aligned_cols=30 Identities=27% Similarity=0.371 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+|+|||+|..|..+|..|++.|. +++|+|
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD 62 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLD 62 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEc
Confidence 489999999999999999999997 899999
No 325
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.80 E-value=0.057 Score=45.68 Aligned_cols=29 Identities=28% Similarity=0.342 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..+++.|++|+++|
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d 34 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYD 34 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEe
Confidence 79999999999999999999999999999
No 326
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.77 E-value=0.054 Score=49.54 Aligned_cols=30 Identities=30% Similarity=0.481 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+|..|+..|..|++.|++|+++|
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d 38 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLD 38 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEE
Confidence 489999999999999999999999999999
No 327
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=93.72 E-value=0.059 Score=46.00 Aligned_cols=29 Identities=41% Similarity=0.568 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..|++.|++|+++|
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d 45 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVD 45 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 69999999999999999999999999999
No 328
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=93.59 E-value=0.092 Score=46.51 Aligned_cols=43 Identities=21% Similarity=0.153 Sum_probs=28.3
Q ss_pred HHHHHCCcEEEcceE---EEEe--CCEEEE-cceeEEEEeCeEEEcCCCCC
Q psy7665 219 KELEKNKIDYFNAKA---VFVD--KHRVKF-AGEERTVSAQNFIIAVGGRP 263 (296)
Q Consensus 219 ~~~~~~~v~~~~~~~---~~~~--~~~v~v-~g~~~~~~a~~vV~AtG~~p 263 (296)
..+++.+++++.+.. ...+ ...+.. +| +++.+|.|++|+|.+|
T Consensus 210 ~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g--~~i~~D~vi~~~g~~~ 258 (401)
T 3vrd_B 210 FGTENALIEWHPGPDAAVVKTDTEAMTVETSFG--ETFKAAVINLIPPQRA 258 (401)
T ss_dssp TTSTTCSEEEECTTTTCEEEEETTTTEEEETTS--CEEECSEEEECCCEEE
T ss_pred HHHHhcCcEEEeCceEEEEEecccceEEEcCCC--cEEEeeEEEEecCcCC
Confidence 445677899876532 1122 234555 55 6799999999999765
No 329
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.58 E-value=0.054 Score=47.85 Aligned_cols=31 Identities=26% Similarity=0.373 Sum_probs=29.3
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..+|+|||+|.+|..+|..+...|.+|+++|
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D 214 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYD 214 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEe
Confidence 3489999999999999999999999999999
No 330
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.56 E-value=0.064 Score=48.43 Aligned_cols=31 Identities=29% Similarity=0.328 Sum_probs=29.4
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..++.|||.|.+|+.+|..++++|++|+.+|
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~D 51 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYD 51 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEE
Confidence 3489999999999999999999999999999
No 331
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.53 E-value=0.079 Score=44.60 Aligned_cols=29 Identities=17% Similarity=0.161 Sum_probs=28.1
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..|++.|++|++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 30 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWL 30 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEE
Confidence 58999999999999999999999999999
No 332
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.50 E-value=0.067 Score=45.97 Aligned_cols=30 Identities=37% Similarity=0.412 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
.+|+|||+|..|...|..|++.|+ +|+++|
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d 39 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLED 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 479999999999999999999998 999999
No 333
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.43 E-value=0.072 Score=45.66 Aligned_cols=29 Identities=28% Similarity=0.325 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
+|+|||+|..|...|..|+..|+ +|+++|
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D 32 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVD 32 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 69999999999999999999998 999999
No 334
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.40 E-value=0.069 Score=48.44 Aligned_cols=30 Identities=30% Similarity=0.422 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+|..|+..|..|++.|++|+++|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D 32 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCID 32 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEE
Confidence 379999999999999999999999999999
No 335
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.40 E-value=0.06 Score=45.80 Aligned_cols=30 Identities=23% Similarity=0.335 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|+|||+|..|...|..|++.|++|++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~ 32 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIG 32 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEE
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEE
Confidence 379999999999999999999999999999
No 336
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.34 E-value=0.073 Score=47.52 Aligned_cols=31 Identities=35% Similarity=0.521 Sum_probs=29.2
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..|+|||+|.+|+.++..+...|.+|+++|
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D 202 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFD 202 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEc
Confidence 3489999999999999999999999999999
No 337
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.31 E-value=0.078 Score=46.02 Aligned_cols=30 Identities=17% Similarity=0.392 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+|..|...|..|++.|++|++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~ 33 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLA 33 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEE
Confidence 379999999999999999999999999999
No 338
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.29 E-value=0.098 Score=42.09 Aligned_cols=31 Identities=13% Similarity=0.347 Sum_probs=28.8
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..+|.|||+|..|...|..|++.|++|++++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~ 49 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYG 49 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEc
Confidence 3479999999999999999999999999999
No 339
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=93.18 E-value=0.091 Score=46.59 Aligned_cols=31 Identities=26% Similarity=0.308 Sum_probs=29.1
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+.+|+|+|+|.+|+.++..+...|.+|+++|
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d 202 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATD 202 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 4489999999999999999999999999999
No 340
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.13 E-value=0.068 Score=46.43 Aligned_cols=30 Identities=27% Similarity=0.315 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+|+|||+|..|...|..|++.|+ +|+++|
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D 40 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYD 40 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 479999999999999999999998 999999
No 341
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.11 E-value=0.084 Score=45.49 Aligned_cols=30 Identities=20% Similarity=0.320 Sum_probs=27.7
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEE
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALF 144 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~ii 144 (296)
..+|.|||+|..|...|..|++.|++|+++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~ 48 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI 48 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE
Confidence 347999999999999999999999999998
No 342
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.10 E-value=0.085 Score=45.73 Aligned_cols=30 Identities=27% Similarity=0.392 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+|+|||+|..|...|..+++.|+ +|+++|
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~D 45 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFD 45 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 479999999999999999999998 999999
No 343
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.99 E-value=0.047 Score=49.73 Aligned_cols=30 Identities=20% Similarity=0.436 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|+|+|+|-.|...|..|.+.|++|+++|
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId 33 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVD 33 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEE
Confidence 379999999999999999999999999999
No 344
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.93 E-value=0.084 Score=46.64 Aligned_cols=32 Identities=31% Similarity=0.546 Sum_probs=29.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+.+|+|+|||.+|+.+|..+...|. +|+++|
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D 219 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVD 219 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEE
Confidence 45689999999999999999999998 999999
No 345
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.91 E-value=0.1 Score=45.11 Aligned_cols=30 Identities=37% Similarity=0.355 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+|.-|...|..+++.|++|+++|
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d 36 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYD 36 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEe
Confidence 379999999999999999999999999999
No 346
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.84 E-value=0.098 Score=45.22 Aligned_cols=30 Identities=30% Similarity=0.371 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+|+|||+|..|...|..++..|+ +|+++|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~D 35 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFD 35 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEe
Confidence 379999999999999999999998 999999
No 347
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.79 E-value=0.05 Score=40.89 Aligned_cols=31 Identities=16% Similarity=0.113 Sum_probs=28.6
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..|+|||+|..|...+..|.+.|.+|++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~ 51 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAG 51 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEc
Confidence 3479999999999999999999999999999
No 348
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.77 E-value=0.11 Score=44.99 Aligned_cols=30 Identities=33% Similarity=0.406 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+|.|||+|..|...|..|+..|+ +++++|
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~D 38 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFD 38 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEe
Confidence 489999999999999999999998 999999
No 349
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.76 E-value=0.1 Score=44.45 Aligned_cols=29 Identities=21% Similarity=0.315 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..|++.|++|++++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLID 33 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEE
Confidence 79999999999999999999999999999
No 350
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.72 E-value=0.11 Score=44.67 Aligned_cols=30 Identities=27% Similarity=0.398 Sum_probs=28.1
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+|+|||+|..|...|..++..|+ +|+++|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~D 33 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLD 33 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEe
Confidence 379999999999999999999997 999999
No 351
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.71 E-value=0.1 Score=47.49 Aligned_cols=31 Identities=19% Similarity=0.302 Sum_probs=29.3
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..|+|||||.+|...+..|.+.|.+|+|++
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~ 42 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNA 42 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEc
Confidence 3479999999999999999999999999999
No 352
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.68 E-value=0.1 Score=45.97 Aligned_cols=32 Identities=22% Similarity=0.262 Sum_probs=29.7
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+.+|+|+|||.+|+.+|..|...|. +|+++|
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~D 223 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVD 223 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 45689999999999999999999998 899999
No 353
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.65 E-value=0.11 Score=45.61 Aligned_cols=30 Identities=37% Similarity=0.632 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..|+|+|+|.+|..++..++..|.+|++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~d 197 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFD 197 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEe
Confidence 489999999999999999999999999999
No 354
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.64 E-value=0.11 Score=44.39 Aligned_cols=29 Identities=28% Similarity=0.470 Sum_probs=27.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|+|||+|..|...|..|+ .|.+|++++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~ 31 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVT 31 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEE
Confidence 37999999999999999999 999999999
No 355
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=92.61 E-value=0.11 Score=47.42 Aligned_cols=30 Identities=37% Similarity=0.278 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHhC-CC-cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASM-NK-KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~-G~-~V~iiE 145 (296)
.+|.|||+|..|+..|..|++. |+ +|+++|
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D 50 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQ 50 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEE
Confidence 3799999999999999999999 99 999999
No 356
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.54 E-value=0.13 Score=44.62 Aligned_cols=32 Identities=25% Similarity=0.362 Sum_probs=29.4
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..+|.|||+|..|...|..|++.|++|++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~ 44 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWA 44 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEe
Confidence 34589999999999999999999999999998
No 357
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.53 E-value=0.12 Score=45.28 Aligned_cols=29 Identities=34% Similarity=0.581 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.|+|+|||..|.++++.+++.|++|+++|
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd 31 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVD 31 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 69999999999999999999999999999
No 358
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.51 E-value=0.1 Score=47.14 Aligned_cols=29 Identities=21% Similarity=0.213 Sum_probs=28.1
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|+..|..|++.|++|++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d 30 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVD 30 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 58999999999999999999999999999
No 359
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=92.50 E-value=0.13 Score=44.57 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=28.8
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
..+|.|||+|..|...|..++..|. +++++|
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~D 53 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVD 53 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEE
Confidence 3589999999999999999999997 899999
No 360
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.38 E-value=0.13 Score=45.27 Aligned_cols=31 Identities=35% Similarity=0.607 Sum_probs=29.2
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
...|+|+|+|..|..+|..++..|.+|++++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d 196 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILD 196 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEE
Confidence 3579999999999999999999999999999
No 361
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.22 E-value=0.13 Score=44.22 Aligned_cols=30 Identities=33% Similarity=0.371 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+|.|||+|..|...|..++..|+ +|+++|
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D 39 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLVD 39 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEe
Confidence 479999999999999999999999 999999
No 362
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.20 E-value=0.14 Score=45.28 Aligned_cols=31 Identities=39% Similarity=0.621 Sum_probs=29.3
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..|+|||+|..|..+|..++..|.+|++++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d 198 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLD 198 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEe
Confidence 4589999999999999999999999999999
No 363
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.13 E-value=0.14 Score=44.14 Aligned_cols=30 Identities=33% Similarity=0.407 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
.+|+|||+|.+|...|..|+..|. +++++|
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~D 39 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLID 39 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 489999999999999999999987 899999
No 364
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.12 E-value=0.15 Score=45.63 Aligned_cols=29 Identities=21% Similarity=0.228 Sum_probs=28.5
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|+|+|.|..|...|..|.+.|.+|+++|
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId 34 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLD 34 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEE
Confidence 79999999999999999999999999999
No 365
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.12 E-value=0.11 Score=44.69 Aligned_cols=30 Identities=37% Similarity=0.419 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+|.|||+|..|...|..|++.|+ +|+++|
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D 35 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFD 35 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEe
Confidence 379999999999999999999998 999999
No 366
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.07 E-value=0.15 Score=46.05 Aligned_cols=30 Identities=20% Similarity=0.345 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..+.|||.|..|+..|..|++.|++|++++
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D 38 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVD 38 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEe
Confidence 479999999999999999999999999999
No 367
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.98 E-value=0.13 Score=46.84 Aligned_cols=29 Identities=24% Similarity=0.261 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..+++.|++|+++|
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D 67 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVE 67 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEE
Confidence 79999999999999999999999999999
No 368
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.86 E-value=0.15 Score=44.38 Aligned_cols=30 Identities=30% Similarity=0.361 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+|..|...|..|++.|++|++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~ 34 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWD 34 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEe
Confidence 379999999999999999999999999999
No 369
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=91.84 E-value=0.14 Score=43.56 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=29.0
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
....|+|||+|-.|+.+|.+|++.|. +++|+|
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD 67 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFD 67 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEEC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEEC
Confidence 34589999999999999999999995 799999
No 370
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.81 E-value=0.2 Score=41.32 Aligned_cols=32 Identities=22% Similarity=0.346 Sum_probs=29.4
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
...+|.|||+|..|...|..|++.|++|++++
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~ 49 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGT 49 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 34589999999999999999999999999999
No 371
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.81 E-value=0.16 Score=43.64 Aligned_cols=29 Identities=31% Similarity=0.519 Sum_probs=27.2
Q ss_pred cEEEECCChHHHHHHHHHHhC--CCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASM--NKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE 145 (296)
+|+|||+|..|...|..|++. |.+|+++|
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D 32 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLD 32 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 699999999999999999985 78999999
No 372
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=91.79 E-value=0.19 Score=43.52 Aligned_cols=32 Identities=25% Similarity=0.357 Sum_probs=29.1
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
...+|.|||+|..|...|+.++.+|. +++++|
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~D 51 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVD 51 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEe
Confidence 34589999999999999999999987 899999
No 373
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=91.73 E-value=0.17 Score=43.95 Aligned_cols=31 Identities=16% Similarity=0.372 Sum_probs=28.4
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
..+|+|||+|-.|+.+|.+|+..|. +++|+|
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD 65 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVD 65 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEec
Confidence 3489999999999999999999996 689998
No 374
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.72 E-value=0.13 Score=43.96 Aligned_cols=30 Identities=27% Similarity=0.532 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
.+|.|||+|..|...|..++..|. +++++|
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~D 46 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLD 46 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEc
Confidence 489999999999999999999998 999999
No 375
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=91.68 E-value=0.17 Score=42.08 Aligned_cols=30 Identities=30% Similarity=0.286 Sum_probs=28.0
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+|+|||+|-.|..+|..|++.|. +++|+|
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD 59 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLAD 59 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEEC
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEe
Confidence 489999999999999999999996 789998
No 376
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.65 E-value=0.18 Score=42.57 Aligned_cols=29 Identities=24% Similarity=0.328 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||.|..|...|..|++.|++|++++
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~d 31 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWN 31 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEc
Confidence 69999999999999999999999999999
No 377
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.62 E-value=0.16 Score=46.06 Aligned_cols=30 Identities=23% Similarity=0.249 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+|.-|...|..+++.|++|+++|
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D 84 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVV 84 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEE
Confidence 479999999999999999999999999999
No 378
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=91.54 E-value=0.22 Score=43.40 Aligned_cols=31 Identities=32% Similarity=0.534 Sum_probs=28.1
Q ss_pred cccEEEECC-ChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 115 DYDLCVIGG-GSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 115 ~~dVvVIGg-G~aG~~aA~~l~~~G~--~V~iiE 145 (296)
..+|+|||+ |.+|..+|+.+..+|. +++++|
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiD 41 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYD 41 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEe
Confidence 348999998 9999999999999984 899999
No 379
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=91.51 E-value=0.25 Score=39.86 Aligned_cols=30 Identities=20% Similarity=0.144 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+|..|...|..|.+.|++|++++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~ 58 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGS 58 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEe
Confidence 479999999999999999999999999999
No 380
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=91.47 E-value=0.18 Score=42.95 Aligned_cols=30 Identities=33% Similarity=0.376 Sum_probs=28.4
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..+|.|||+|.-|...|..++ .|++|+++|
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d 41 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQD 41 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEEC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEE
Confidence 458999999999999999999 999999999
No 381
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.46 E-value=0.21 Score=41.83 Aligned_cols=31 Identities=16% Similarity=0.266 Sum_probs=29.0
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..++|+|+|.+|..+|..|++.|.+|++++
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~ 149 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITN 149 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEE
Confidence 3479999999999999999999999999998
No 382
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.45 E-value=0.18 Score=44.21 Aligned_cols=30 Identities=30% Similarity=0.424 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+|..|...|..|++.|++|++++
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~ 59 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWS 59 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEEC
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEe
Confidence 479999999999999999999999999999
No 383
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.44 E-value=0.19 Score=43.07 Aligned_cols=30 Identities=17% Similarity=0.242 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||.|..|...|..|++.|++|++++
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~d 51 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWN 51 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEe
Confidence 479999999999999999999999999999
No 384
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.36 E-value=0.15 Score=43.99 Aligned_cols=29 Identities=14% Similarity=0.321 Sum_probs=28.0
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..|++.|++|++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~ 30 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWG 30 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEE
Confidence 58999999999999999999999999999
No 385
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=91.34 E-value=0.19 Score=44.09 Aligned_cols=32 Identities=19% Similarity=0.184 Sum_probs=29.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|+|+|.|..|..+|..|.+.|.+|++.|
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D 203 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTD 203 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEc
Confidence 45689999999999999999999999999988
No 386
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.32 E-value=0.18 Score=42.79 Aligned_cols=30 Identities=27% Similarity=0.353 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||.|..|...|..|++.|++|++++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~d 45 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYD 45 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEEC
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEe
Confidence 479999999999999999999999999999
No 387
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.29 E-value=0.21 Score=42.54 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||.|..|...|..|++.|++|++++
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~d 37 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGAD 37 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEE
Confidence 479999999999999999999999999999
No 388
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.28 E-value=0.16 Score=45.62 Aligned_cols=29 Identities=28% Similarity=0.398 Sum_probs=27.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+|..|+..|..|++ |++|+++|
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D 65 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALD 65 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEe
Confidence 489999999999999999998 99999999
No 389
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=91.26 E-value=0.19 Score=45.78 Aligned_cols=32 Identities=19% Similarity=0.144 Sum_probs=29.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|+|+|+|..|..+|..|+..|.+|+++|
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D 295 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTE 295 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEc
Confidence 34589999999999999999999999999999
No 390
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.20 E-value=0.22 Score=42.98 Aligned_cols=30 Identities=30% Similarity=0.386 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+|.|||+|..|...|..|+..|. +++++|
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~D 36 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFD 36 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEe
Confidence 479999999999999999999988 999999
No 391
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.11 E-value=0.19 Score=43.46 Aligned_cols=30 Identities=23% Similarity=0.285 Sum_probs=28.1
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
.+|.|||+|..|...|..|+..|. +++++|
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D 37 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVID 37 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEe
Confidence 479999999999999999999987 899999
No 392
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.10 E-value=0.17 Score=43.66 Aligned_cols=29 Identities=24% Similarity=0.278 Sum_probs=27.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
+|.|||+|..|...|..|++.|+ +|+++|
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D 32 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLID 32 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEe
Confidence 68999999999999999999998 999999
No 393
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.06 E-value=0.19 Score=43.51 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=28.4
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
..+|+|||+|..|..+|..|+..|. +++++|
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D 41 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVD 41 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEe
Confidence 3489999999999999999999887 899999
No 394
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.02 E-value=0.16 Score=45.29 Aligned_cols=28 Identities=25% Similarity=0.398 Sum_probs=27.0
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|+..|..|++ |++|++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d 29 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVD 29 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEE
Confidence 58999999999999999999 99999999
No 395
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=90.98 E-value=0.27 Score=45.46 Aligned_cols=30 Identities=17% Similarity=0.131 Sum_probs=27.4
Q ss_pred ccEEEECCChHHHHH-HHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISA-AKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~a-A~~l~~~G~~V~iiE 145 (296)
.+|.+||.|-+|+++ |..|.++|++|++.|
T Consensus 20 ~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD 50 (524)
T 3hn7_A 20 MHIHILGICGTFMGSLALLARALGHTVTGSD 50 (524)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEEecHhhHHHHHHHHHhCCCEEEEEC
Confidence 479999999999985 888899999999999
No 396
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=90.94 E-value=0.26 Score=39.34 Aligned_cols=29 Identities=17% Similarity=0.319 Sum_probs=27.8
Q ss_pred cEEEEC-CChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIG-GGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIG-gG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|+||| +|..|...|..|.+.|++|++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~ 31 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGS 31 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEE
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 589999 99999999999999999999999
No 397
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=90.86 E-value=0.2 Score=45.07 Aligned_cols=31 Identities=26% Similarity=0.208 Sum_probs=28.8
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+.+..|||.|..|+.+|..|++.|++|+++|
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D 41 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVD 41 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEEC
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEE
Confidence 3478999999999999999999999999999
No 398
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.83 E-value=0.29 Score=41.08 Aligned_cols=32 Identities=16% Similarity=0.226 Sum_probs=29.6
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
+..++|||+|-+|-.++..|++.|.+|+|+.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nR 149 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNR 149 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 45899999999999999999999999999983
No 399
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=90.81 E-value=0.2 Score=43.13 Aligned_cols=30 Identities=23% Similarity=0.350 Sum_probs=27.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
.+|+|||+|.+|...|..|+..|. ++.++|
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~D 38 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIID 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 489999999999999999998884 799998
No 400
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=90.80 E-value=0.19 Score=42.39 Aligned_cols=29 Identities=17% Similarity=0.189 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||.|..|...|..|++.|++|++++
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d 31 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWN 31 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEEC
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEc
Confidence 69999999999999999999999999999
No 401
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=90.78 E-value=0.19 Score=42.82 Aligned_cols=29 Identities=28% Similarity=0.350 Sum_probs=27.6
Q ss_pred cEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
+|+|||+|..|...|..|++.|. +++++|
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D 32 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVD 32 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEE
Confidence 69999999999999999999998 899999
No 402
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=90.73 E-value=0.19 Score=43.08 Aligned_cols=29 Identities=21% Similarity=0.349 Sum_probs=27.6
Q ss_pred cEEEECCChHHHHHHHHHHhCC--CcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMN--KKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G--~~V~iiE 145 (296)
+|+|||+|..|...|..|++.| .+|+++|
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d 33 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFID 33 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEc
Confidence 6999999999999999999999 7899999
No 403
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=90.61 E-value=0.25 Score=41.95 Aligned_cols=29 Identities=24% Similarity=0.352 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..|++.|++|++++
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d 33 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFD 33 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEc
Confidence 79999999999999999999999999999
No 404
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.60 E-value=0.17 Score=44.32 Aligned_cols=29 Identities=21% Similarity=0.330 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..|++.|++|++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~ 45 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWH 45 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEE
Confidence 79999999999999999999999999999
No 405
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=90.56 E-value=0.17 Score=45.08 Aligned_cols=29 Identities=34% Similarity=0.572 Sum_probs=27.4
Q ss_pred cEEEECCChHHHHHHHHHHh-CCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAAS-MNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~-~G~~V~iiE 145 (296)
+|.|||+|..|...|..|++ .|++|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 79999999999999999998 499999998
No 406
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=90.52 E-value=0.25 Score=44.22 Aligned_cols=32 Identities=19% Similarity=0.172 Sum_probs=29.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|+|+|.|..|..+|..|+..|.+|+++|
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D 250 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTE 250 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEe
Confidence 45689999999999999999999999999999
No 407
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.52 E-value=0.24 Score=42.61 Aligned_cols=30 Identities=17% Similarity=0.392 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||.|..|...|..|++.|++|++++
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~d 61 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWN 61 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEc
Confidence 489999999999999999999999999999
No 408
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=90.47 E-value=0.21 Score=43.61 Aligned_cols=31 Identities=16% Similarity=0.176 Sum_probs=28.7
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
..+|+|||+|..|+++|..|++.|. +++|+|
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD 67 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLD 67 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEE
Confidence 3489999999999999999999997 799998
No 409
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.47 E-value=0.29 Score=41.55 Aligned_cols=32 Identities=28% Similarity=0.375 Sum_probs=29.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|.|||+|..|..+|..|...|.+|++++
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d 185 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGA 185 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEE
Confidence 45589999999999999999999999999999
No 410
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=90.43 E-value=0.26 Score=45.11 Aligned_cols=29 Identities=41% Similarity=0.605 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..+++.|++|+++|
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D 35 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYD 35 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEE
Confidence 79999999999999999999999999999
No 411
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.35 E-value=0.29 Score=41.61 Aligned_cols=32 Identities=22% Similarity=0.333 Sum_probs=29.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|.|||+|..|..+|..|...|.+|++++
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d 187 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGA 187 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEE
Confidence 34589999999999999999999999999999
No 412
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=90.31 E-value=0.26 Score=45.15 Aligned_cols=32 Identities=16% Similarity=0.210 Sum_probs=29.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|+|||.|..|..+|..++..|.+|+++|
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d 304 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTE 304 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEe
Confidence 34589999999999999999999999999999
No 413
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.16 E-value=0.39 Score=40.16 Aligned_cols=31 Identities=16% Similarity=0.251 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEec
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
..|+|.|+|..|...+..|.+.|++|+++.+
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r 34 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRR 34 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence 3799999999999999999999999999993
No 414
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.13 E-value=0.29 Score=42.09 Aligned_cols=31 Identities=26% Similarity=0.363 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHhCC-CcEEEEec
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMN-KKVALFDF 146 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G-~~V~iiE~ 146 (296)
.+|.|||.|..|...|..|++.| ++|+++++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr 56 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDL 56 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeC
Confidence 47999999999999999999999 99999993
No 415
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.08 E-value=0.32 Score=41.44 Aligned_cols=31 Identities=19% Similarity=0.283 Sum_probs=28.8
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
+..++|||+|.+|..+|..|++.|. +|+|+.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~n 172 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMAN 172 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEEC
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEe
Confidence 4579999999999999999999997 899998
No 416
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=90.01 E-value=0.24 Score=42.58 Aligned_cols=29 Identities=31% Similarity=0.491 Sum_probs=27.4
Q ss_pred cEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
+|.|||+|..|...|..+++.|. +++++|
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D 32 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVD 32 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 69999999999999999999887 899999
No 417
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.94 E-value=0.26 Score=41.37 Aligned_cols=31 Identities=10% Similarity=0.243 Sum_probs=29.1
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..++|+|+|.+|..+|..|++.|.+|+|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~ 149 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLAN 149 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEE
Confidence 3479999999999999999999999999999
No 418
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=89.94 E-value=0.32 Score=43.08 Aligned_cols=31 Identities=19% Similarity=0.299 Sum_probs=29.2
Q ss_pred cccEEEECC-ChHHHHHHHHHHhCCC---cEEEEe
Q psy7665 115 DYDLCVIGG-GSGGISAAKEAASMNK---KVALFD 145 (296)
Q Consensus 115 ~~dVvVIGg-G~aG~~aA~~l~~~G~---~V~iiE 145 (296)
..+|+|||| |-+|..|+..+...|. +|+++|
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D 248 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWD 248 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEee
Confidence 358999999 9999999999999997 999999
No 419
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.92 E-value=0.37 Score=41.08 Aligned_cols=30 Identities=33% Similarity=0.538 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||.|..|...|..|++.|++|++++
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~d 39 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWN 39 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEe
Confidence 479999999999999999999999999999
No 420
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.87 E-value=0.39 Score=38.91 Aligned_cols=31 Identities=13% Similarity=0.113 Sum_probs=29.0
Q ss_pred cccEEEECC-ChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGG-GSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGg-G~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..|+|.|| |..|...+.+|.++|++|+++.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~ 52 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMV 52 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEE
Confidence 457999998 9999999999999999999998
No 421
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.84 E-value=0.3 Score=40.77 Aligned_cols=30 Identities=13% Similarity=0.040 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|+|.|+|..|...+.+|.++|++|+++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~ 35 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTS 35 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEE
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEE
Confidence 479999999999999999999999999998
No 422
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=89.83 E-value=0.29 Score=42.35 Aligned_cols=31 Identities=19% Similarity=0.303 Sum_probs=28.1
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
..+|+|||+|.+|...|..|+..+. ++.++|
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~D 41 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVD 41 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEe
Confidence 3589999999999999999998886 799999
No 423
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=89.74 E-value=0.33 Score=42.91 Aligned_cols=31 Identities=35% Similarity=0.494 Sum_probs=29.3
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..|+|||+|..|...+..+.+.|++|++++
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d 44 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLD 44 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEe
Confidence 3489999999999999999999999999999
No 424
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=89.73 E-value=0.28 Score=42.05 Aligned_cols=29 Identities=17% Similarity=0.281 Sum_probs=26.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
+|.|||+|..|...|..++..|+ +++++|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~D 30 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIA 30 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEEC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEc
Confidence 48999999999999999998888 699999
No 425
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=89.68 E-value=0.35 Score=41.29 Aligned_cols=30 Identities=17% Similarity=0.285 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+|..|...|..|++.|++|++++
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~ 60 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWN 60 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEe
Confidence 479999999999999999999999999999
No 426
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.67 E-value=0.33 Score=40.60 Aligned_cols=29 Identities=21% Similarity=0.154 Sum_probs=27.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..|.+.|++|++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 30 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVS 30 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEE
Confidence 58999999999999999999999999998
No 427
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.61 E-value=0.15 Score=41.57 Aligned_cols=29 Identities=10% Similarity=0.169 Sum_probs=27.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..++|+|+|..|...|..|.+.|+ |+++|
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid 38 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAE 38 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEES
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEE
Confidence 379999999999999999999999 99999
No 428
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=89.60 E-value=0.3 Score=42.05 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=27.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
.+|+|||+|.+|...|..|+..+. ++.++|
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~D 37 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVD 37 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEe
Confidence 589999999999999999998886 799999
No 429
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=89.56 E-value=0.23 Score=45.40 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=28.2
Q ss_pred ccEEEECCChHHHHHHHHHHhC--CCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASM--NKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE 145 (296)
.+|.|||+|..|+..|..|++. |++|+++|
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D 41 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVD 41 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3799999999999999999998 79999999
No 430
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=89.55 E-value=0.39 Score=40.82 Aligned_cols=30 Identities=17% Similarity=0.242 Sum_probs=28.7
Q ss_pred ccEEEEC-CChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIG-GGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIG-gG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.||| +|..|...|..|++.|++|.+++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~ 52 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILD 52 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEEC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEE
Confidence 3799999 99999999999999999999999
No 431
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=89.54 E-value=0.32 Score=45.50 Aligned_cols=31 Identities=16% Similarity=0.372 Sum_probs=28.7
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
..+|+|||+|-.|+.+|.+|++.|. +++|+|
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD 357 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVD 357 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEc
Confidence 4589999999999999999999996 799999
No 432
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=89.48 E-value=0.39 Score=40.47 Aligned_cols=29 Identities=24% Similarity=0.319 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..|.+.|++|++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~ 30 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYD 30 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEEC
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEe
Confidence 58999999999999999999999999999
No 433
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=89.43 E-value=0.31 Score=45.49 Aligned_cols=31 Identities=16% Similarity=0.372 Sum_probs=28.7
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
..+|+|||+|-.|+.+|.+|++.|. +++|+|
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD 358 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVD 358 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 4589999999999999999999996 799998
No 434
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=89.39 E-value=0.23 Score=42.31 Aligned_cols=30 Identities=20% Similarity=0.123 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHHhC-----C-CcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASM-----N-KKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~-----G-~~V~iiE 145 (296)
.+|.|||+|..|...|..|++. | ++|++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~ 44 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIA 44 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEE
Confidence 3799999999999999999999 9 9999998
No 435
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=89.36 E-value=0.29 Score=41.63 Aligned_cols=29 Identities=28% Similarity=0.350 Sum_probs=26.6
Q ss_pred cEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
+|.|||+|.+|..+|+.|..++. +++|+|
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~D 32 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVD 32 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 69999999999999999988874 799999
No 436
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=89.36 E-value=0.4 Score=43.18 Aligned_cols=30 Identities=27% Similarity=0.345 Sum_probs=28.1
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+|+|||+|-.|+++|.+|++.|. +++|+|
T Consensus 41 ~~VlvvG~GGlGs~va~~La~aGvg~i~ivD 71 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALSGFRQIHVID 71 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHTTCCCEEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEc
Confidence 489999999999999999999996 799998
No 437
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=89.32 E-value=0.3 Score=42.70 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=28.5
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
...|+|||+|..|+.+|.+|++.|. +++|+|
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD 149 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILID 149 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEC
Confidence 3489999999999999999999996 799999
No 438
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=89.31 E-value=0.37 Score=42.08 Aligned_cols=32 Identities=28% Similarity=0.201 Sum_probs=29.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|+|+|.|.+|..+|..|.+.|.+|++.|
T Consensus 174 ~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD 205 (355)
T 1c1d_A 174 DGLTVLVQGLGAVGGSLASLAAEAGAQLLVAD 205 (355)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEEe
Confidence 45689999999999999999999999999888
No 439
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=89.26 E-value=0.34 Score=40.97 Aligned_cols=30 Identities=20% Similarity=0.203 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+|..|...|..|.+.|++|.+++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 35 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSD 35 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEEC
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEe
Confidence 379999999999999999999999999998
No 440
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=89.21 E-value=0.48 Score=37.67 Aligned_cols=29 Identities=24% Similarity=0.393 Sum_probs=27.5
Q ss_pred cEEEECC-ChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGG-GSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGg-G~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|+|+|| |..|...+..|.++|++|+++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~ 31 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIV 31 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEE
Confidence 5999996 9999999999999999999999
No 441
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=89.17 E-value=0.35 Score=40.06 Aligned_cols=29 Identities=14% Similarity=0.319 Sum_probs=27.7
Q ss_pred cEEEECCChHHHHHHHHHHhCC-CcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMN-KKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G-~~V~iiE 145 (296)
+|.|||+|..|...|..|++.| ++|.+++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~ 31 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIAN 31 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEEC
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEEC
Confidence 5899999999999999999999 9999999
No 442
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=89.08 E-value=0.39 Score=40.27 Aligned_cols=28 Identities=21% Similarity=0.292 Sum_probs=26.9
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..|.+ |++|++++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~ 30 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWN 30 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEEC
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEe
Confidence 69999999999999999999 99999999
No 443
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=89.05 E-value=0.45 Score=43.66 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=29.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..+|.|||.|..|...|..|++.|++|++++
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~d 40 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYN 40 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEe
Confidence 34589999999999999999999999999999
No 444
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=89.02 E-value=0.39 Score=42.09 Aligned_cols=30 Identities=17% Similarity=0.331 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||.|..|...|..|++.|++|++++
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G~~V~v~d 52 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGGHECVVYD 52 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHhCCCEEEEEe
Confidence 589999999999999999999999999999
No 445
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=88.99 E-value=0.23 Score=40.12 Aligned_cols=30 Identities=17% Similarity=0.234 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEE-Ee
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVAL-FD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~i-iE 145 (296)
.+|.|||+|..|...|..|++.|++|++ ++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANS 54 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEEC
Confidence 4899999999999999999999999999 77
No 446
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=88.96 E-value=0.45 Score=44.28 Aligned_cols=30 Identities=27% Similarity=0.216 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+++|+|+|..|...|..|.+.|++|+++|
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid 378 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILID 378 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEE
Confidence 589999999999999999999999999999
No 447
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.92 E-value=0.35 Score=41.55 Aligned_cols=30 Identities=27% Similarity=0.305 Sum_probs=27.5
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
.+|+|||+|..|...|..++..|. +++++|
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~D 38 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLID 38 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 489999999999999999998875 799999
No 448
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=88.83 E-value=0.51 Score=37.70 Aligned_cols=29 Identities=24% Similarity=0.377 Sum_probs=27.7
Q ss_pred cEEEECC-ChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGG-GSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGg-G~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|+|.|| |..|...+.+|.++|++|+++.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~ 31 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVV 31 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 5999998 9999999999999999999998
No 449
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=88.82 E-value=0.37 Score=41.39 Aligned_cols=29 Identities=21% Similarity=0.400 Sum_probs=27.1
Q ss_pred cEEEECC-ChHHHHHHHHHHhCC--CcEEEEe
Q psy7665 117 DLCVIGG-GSGGISAAKEAASMN--KKVALFD 145 (296)
Q Consensus 117 dVvVIGg-G~aG~~aA~~l~~~G--~~V~iiE 145 (296)
+|+|||| |.+|...|..|++.| .+++++|
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~D 33 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYD 33 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEE
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEe
Confidence 6999998 999999999999988 6899999
No 450
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=88.78 E-value=0.28 Score=44.59 Aligned_cols=29 Identities=31% Similarity=0.540 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHHHhC--CCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASM--NKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~--G~~V~iiE 145 (296)
+|.|||+|..|+..|..|++. |++|++++
T Consensus 7 kI~VIG~G~mG~~lA~~La~~g~G~~V~~~d 37 (467)
T 2q3e_A 7 KICCIGAGYVGGPTCSVIAHMCPEIRVTVVD 37 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEE
Confidence 799999999999999999999 89999999
No 451
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=88.73 E-value=0.42 Score=40.27 Aligned_cols=32 Identities=16% Similarity=0.287 Sum_probs=29.3
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+..++|+|+|-+|-.+|..|++.|. +|+|+.
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~ 148 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVAN 148 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 34589999999999999999999998 899998
No 452
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.68 E-value=0.42 Score=40.02 Aligned_cols=29 Identities=28% Similarity=0.269 Sum_probs=27.6
Q ss_pred cEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
+|.|||+|..|...|..|++.|+ +|++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d 33 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYD 33 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEe
Confidence 69999999999999999999998 899999
No 453
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=88.66 E-value=0.41 Score=40.15 Aligned_cols=31 Identities=19% Similarity=0.331 Sum_probs=29.0
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+.+|+|||+|..|...|..|.+.|.+|++++
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~ 159 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWN 159 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEE
Confidence 4589999999999999999999999999999
No 454
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=88.65 E-value=0.52 Score=40.46 Aligned_cols=32 Identities=16% Similarity=0.343 Sum_probs=29.2
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+..++|+|+|-+|-.+|..|++.|. +|+|+.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~n 185 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFN 185 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEE
Confidence 34589999999999999999999998 899998
No 455
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=88.60 E-value=0.32 Score=42.81 Aligned_cols=30 Identities=13% Similarity=0.315 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHHhCC-------CcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMN-------KKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G-------~~V~iiE 145 (296)
.+|.|||+|..|...|..|++.| ++|++++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~ 58 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWI 58 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEE
Confidence 37999999999999999999999 9999999
No 456
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=88.60 E-value=0.38 Score=46.35 Aligned_cols=30 Identities=30% Similarity=0.340 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+|..|...|..+++.|++|+++|
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D 342 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKE 342 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEC
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEE
Confidence 479999999999999999999999999999
No 457
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=88.57 E-value=0.43 Score=42.77 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=30.0
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|+|||.|..|..+|..|...|.+|+++|
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D 241 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGARVVVTE 241 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEC
Confidence 35689999999999999999999999999999
No 458
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=88.52 E-value=0.46 Score=41.79 Aligned_cols=31 Identities=35% Similarity=0.517 Sum_probs=29.3
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..|.|||+|..|.+.+..+.+.|++|++++
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d 42 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLD 42 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 3479999999999999999999999999999
No 459
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.51 E-value=0.35 Score=41.40 Aligned_cols=30 Identities=23% Similarity=0.297 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+|.|||.|..|...|..|++.|+ +|++++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~d 55 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYD 55 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEc
Confidence 479999999999999999999999 999999
No 460
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=88.35 E-value=0.55 Score=39.68 Aligned_cols=31 Identities=19% Similarity=0.217 Sum_probs=28.6
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
+..++|+|+|-+|..++..|++.|. +|+|+.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~ 158 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVAD 158 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEE
Confidence 4589999999999999999999998 699998
No 461
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=88.34 E-value=0.46 Score=42.74 Aligned_cols=32 Identities=22% Similarity=0.204 Sum_probs=29.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|+|||.|..|..+|..|+..|.+|+++|
T Consensus 246 ~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d 277 (464)
T 3n58_A 246 AGKVAVVCGYGDVGKGSAQSLAGAGARVKVTE 277 (464)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCCEEEEECcCHHHHHHHHHHHHCCCEEEEEe
Confidence 44589999999999999999999999999998
No 462
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.28 E-value=0.5 Score=43.13 Aligned_cols=31 Identities=23% Similarity=0.279 Sum_probs=29.2
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+.+|.|||+|..|...|..|++.|++|++++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~ 45 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFN 45 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEEC
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEe
Confidence 3479999999999999999999999999999
No 463
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.27 E-value=0.46 Score=39.98 Aligned_cols=30 Identities=13% Similarity=0.344 Sum_probs=28.6
Q ss_pred ccEEEECC-ChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGG-GSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGg-G~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+ |..|...|..|.+.|++|++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~ 42 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIE 42 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEE
Confidence 37999999 9999999999999999999999
No 464
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=88.20 E-value=0.65 Score=38.50 Aligned_cols=31 Identities=13% Similarity=0.261 Sum_probs=28.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+ .++|||+|-+|-.++..|.+.|. +|+|++
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~n 139 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVN 139 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEe
Confidence 35 89999999999999999999998 899999
No 465
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=88.18 E-value=0.45 Score=40.22 Aligned_cols=30 Identities=27% Similarity=0.254 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+|..|...|..|.+.|++|++++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 34 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFD 34 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEe
Confidence 379999999999999999999999999998
No 466
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=88.11 E-value=0.51 Score=41.78 Aligned_cols=30 Identities=20% Similarity=0.227 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..++|+|||+.|...|..++..|++|+++|
T Consensus 205 ~rL~IfGAGhva~ala~~a~~lg~~V~v~D 234 (386)
T 2we8_A 205 PRMLVFGAIDFAAAVAQQGAFLGYRVTVCD 234 (386)
T ss_dssp CEEEEECCSTHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEC
Confidence 489999999999999999999999999999
No 467
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=88.09 E-value=0.55 Score=42.23 Aligned_cols=32 Identities=16% Similarity=0.383 Sum_probs=29.3
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC---cEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK---KVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~---~V~iiE 145 (296)
.+..|+|+|+|-+|..++..|.+.|. +++|++
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 34589999999999999999999997 799998
No 468
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.07 E-value=0.48 Score=40.66 Aligned_cols=30 Identities=27% Similarity=0.242 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC--cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK--KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~--~V~iiE 145 (296)
.+|.|||.|..|...|..|++.|+ +|++++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~d 65 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYD 65 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEE
Confidence 479999999999999999999999 999999
No 469
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=88.04 E-value=0.29 Score=42.57 Aligned_cols=30 Identities=23% Similarity=0.495 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHHhCC-------CcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMN-------KKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G-------~~V~iiE 145 (296)
.+|.|||+|..|...|..|++.| ++|++++
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~ 45 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWV 45 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEE
Confidence 37999999999999999999999 8999999
No 470
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=88.00 E-value=0.46 Score=40.86 Aligned_cols=32 Identities=25% Similarity=0.122 Sum_probs=29.2
Q ss_pred ccccEEEECCC-hHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGG-SGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG-~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+.+++|||+| .+|..+|..|...|.+|++++
T Consensus 176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~n 208 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVD 208 (320)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEEC
T ss_pred CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEe
Confidence 45689999999 579999999999999999997
No 471
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.93 E-value=0.64 Score=38.16 Aligned_cols=29 Identities=21% Similarity=0.290 Sum_probs=28.0
Q ss_pred cEEEECCChHHHHHHHHHHhCCC----cEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNK----KVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~----~V~iiE 145 (296)
+|.|||+|..|...|..|.+.|+ +|.+++
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~ 36 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMINKNIVSSNQIICSD 36 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTSSCGGGEEEEC
T ss_pred eEEEECccHHHHHHHHHHHhCCCCCCCeEEEEe
Confidence 79999999999999999999998 999999
No 472
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=87.91 E-value=0.65 Score=38.58 Aligned_cols=31 Identities=19% Similarity=0.265 Sum_probs=29.0
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+ +++|||+|..|...|..|.+.|.+|++++
T Consensus 116 ~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~ 146 (263)
T 2d5c_A 116 KG-PALVLGAGGAGRAVAFALREAGLEVWVWN 146 (263)
T ss_dssp CS-CEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CC-eEEEECCcHHHHHHHHHHHHCCCEEEEEE
Confidence 45 89999999999999999999999999999
No 473
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.86 E-value=0.65 Score=36.35 Aligned_cols=30 Identities=17% Similarity=0.396 Sum_probs=28.3
Q ss_pred cEEEECC-ChHHHHHHHHHHhCCCcEEEEec
Q psy7665 117 DLCVIGG-GSGGISAAKEAASMNKKVALFDF 146 (296)
Q Consensus 117 dVvVIGg-G~aG~~aA~~l~~~G~~V~iiE~ 146 (296)
.|+|+|| |..|...+.+|.++|++|+++.+
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r 35 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVR 35 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe
Confidence 6999998 99999999999999999999983
No 474
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=87.86 E-value=0.63 Score=39.11 Aligned_cols=29 Identities=24% Similarity=0.292 Sum_probs=27.9
Q ss_pred cEEEECC-ChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGG-GSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGg-G~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|+|.|| |..|...+.+|.++|++|+++.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~ 31 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVS 31 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEE
Confidence 6999998 9999999999999999999998
No 475
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=87.85 E-value=0.54 Score=40.85 Aligned_cols=30 Identities=23% Similarity=0.369 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||.|..|...|..|++.|++|.+++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~d 38 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYN 38 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEe
Confidence 379999999999999999999999999999
No 476
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=87.84 E-value=0.16 Score=41.69 Aligned_cols=30 Identities=17% Similarity=0.328 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||.|..|...|..|++.|++|+.++
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~ 36 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSVGHYVTVLH 36 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHTTCEEEECS
T ss_pred cEEEEEeeCHHHHHHHHHHHHCCCEEEEec
Confidence 379999999999999999999999999998
No 477
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=87.75 E-value=0.46 Score=40.10 Aligned_cols=30 Identities=23% Similarity=0.385 Sum_probs=27.9
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..++|+|+|-.|..+|..|++.| +|++++
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~ 157 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIAN 157 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEEC
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEE
Confidence 347999999999999999999999 999998
No 478
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=87.73 E-value=0.62 Score=39.31 Aligned_cols=32 Identities=9% Similarity=0.080 Sum_probs=29.2
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+..++|+|+|-+|-.++..|.+.|. +|+|+.
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~n 153 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVT 153 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEE
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEe
Confidence 34589999999999999999999998 899998
No 479
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=87.72 E-value=0.42 Score=42.59 Aligned_cols=31 Identities=26% Similarity=0.341 Sum_probs=28.8
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
+..|+|||+|..|..+|..|...|. +|++++
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~ 198 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDRGVRAVLVAN 198 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHHCCSEEEEEC
T ss_pred CCEEEEEChHHHHHHHHHHHHHCCCCEEEEEe
Confidence 4589999999999999999999998 899998
No 480
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=87.64 E-value=0.65 Score=40.23 Aligned_cols=30 Identities=23% Similarity=0.188 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..|.|||+|..|...|..|++.|++|++++
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~ 46 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGL 46 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEE
Confidence 379999999999999999999999999999
No 481
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=87.57 E-value=0.64 Score=42.46 Aligned_cols=29 Identities=21% Similarity=0.230 Sum_probs=28.3
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..|++.|++|++++
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~G~~V~v~d 32 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDHGFVVCAFN 32 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred eEEEEChHHHHHHHHHHHHHCCCeEEEEe
Confidence 79999999999999999999999999999
No 482
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=87.54 E-value=0.55 Score=38.76 Aligned_cols=30 Identities=23% Similarity=0.325 Sum_probs=28.1
Q ss_pred ccEEEECCChHHHHHHHHHHhCC----CcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMN----KKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G----~~V~iiE 145 (296)
.+|.|||+|..|...|..|++.| ++|.+++
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~ 38 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYG 38 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEe
Confidence 37999999999999999999999 7999999
No 483
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=87.52 E-value=0.43 Score=44.98 Aligned_cols=30 Identities=23% Similarity=0.289 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
..|+|||+|..|+++|..|++.|. +++|+|
T Consensus 18 s~VlVVGaGGLGsevak~La~aGVG~ItlvD 48 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTGFSHIDLID 48 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEec
Confidence 489999999999999999999996 799999
No 484
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=87.52 E-value=0.45 Score=39.40 Aligned_cols=29 Identities=21% Similarity=0.052 Sum_probs=27.5
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..|++.|++|++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~ 30 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSL 30 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECC
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeC
Confidence 58999999999999999999999999987
No 485
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=87.43 E-value=0.34 Score=40.80 Aligned_cols=29 Identities=24% Similarity=0.223 Sum_probs=27.8
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..|.+.|++|++++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT 33 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc
Confidence 69999999999999999999999999997
No 486
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=87.42 E-value=0.55 Score=42.01 Aligned_cols=31 Identities=35% Similarity=0.396 Sum_probs=29.2
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..|+|+|+|..|.+.+..+.+.|++|++++
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d 65 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQSMGYRVAVLD 65 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEC
Confidence 3489999999999999999999999999999
No 487
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=87.41 E-value=0.55 Score=42.82 Aligned_cols=29 Identities=38% Similarity=0.455 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|.|||+|..|...|..|++.|++|++++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~d 31 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFN 31 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEe
Confidence 69999999999999999999999999999
No 488
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=87.39 E-value=0.72 Score=39.61 Aligned_cols=32 Identities=22% Similarity=0.237 Sum_probs=28.2
Q ss_pred ccccEEEECC-ChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGG-GSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGg-G~aG~~aA~~l~~~G~~V~iiE 145 (296)
....|+|.|| |..|...+..|.++|++|+++.
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~ 50 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFD 50 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEe
Confidence 3458999998 9999999999999999999999
No 489
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=87.37 E-value=0.71 Score=42.16 Aligned_cols=30 Identities=20% Similarity=0.198 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||.|..|...|..|++.|++|++++
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~d 34 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFN 34 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEe
Confidence 479999999999999999999999999999
No 490
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=87.36 E-value=0.69 Score=38.82 Aligned_cols=32 Identities=9% Similarity=0.134 Sum_probs=28.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+..++|+|+|-+|..++..|++.|. +|+|+.
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~ 151 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIAN 151 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEEC
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEe
Confidence 34589999999999999999999995 899998
No 491
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=87.36 E-value=0.56 Score=40.15 Aligned_cols=29 Identities=28% Similarity=0.469 Sum_probs=26.8
Q ss_pred cEEEECCChHHHHHHHHHHhCC--CcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMN--KKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G--~~V~iiE 145 (296)
+|+|||+|.+|...|..|+..+ .+++++|
T Consensus 2 KI~IiGaG~vG~~~a~~l~~~~~~~el~L~D 32 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALALLGVAREVVLVD 32 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEe
Confidence 6999999999999999999987 5799999
No 492
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=87.28 E-value=0.72 Score=38.83 Aligned_cols=31 Identities=23% Similarity=0.253 Sum_probs=28.7
Q ss_pred cccEEEEC-CChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIG-GGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIG-gG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+..++|+| +|.+|..+|..|++.|.+|+++.
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~ 150 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCG 150 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence 34799999 89999999999999999999998
No 493
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=87.25 E-value=0.5 Score=43.71 Aligned_cols=31 Identities=16% Similarity=0.302 Sum_probs=28.6
Q ss_pred cccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
..+|+|||+|..|+++|..|++.|. +++|+|
T Consensus 32 ~~~VlvvG~GGlGseiak~La~aGVg~itlvD 63 (531)
T 1tt5_A 32 SAHVCLINATATGTEILKNLVLPGIGSFTIID 63 (531)
T ss_dssp HCEEEEECCSHHHHHHHHHHHTTTCSEEEEEC
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEEe
Confidence 3489999999999999999999996 799999
No 494
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=87.24 E-value=0.46 Score=45.68 Aligned_cols=30 Identities=27% Similarity=0.298 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 116 ~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+|.|||+|..|...|..+++.|++|+++|
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D 344 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKD 344 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEE
Confidence 479999999999999999999999999999
No 495
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=87.24 E-value=0.71 Score=38.94 Aligned_cols=32 Identities=13% Similarity=0.214 Sum_probs=28.9
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+..++|+|+|-+|-..+..|++.|. +|+|+.
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~ 157 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTN 157 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEE
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEE
Confidence 34589999999999999999999995 899999
No 496
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=87.21 E-value=0.53 Score=41.88 Aligned_cols=31 Identities=29% Similarity=0.468 Sum_probs=29.4
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
...|+|+|||..|.+.+..+.+.|++|++++
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Confidence 4589999999999999999999999999999
No 497
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=87.19 E-value=0.47 Score=40.34 Aligned_cols=31 Identities=13% Similarity=0.243 Sum_probs=28.3
Q ss_pred cccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 115 ~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
..+|-+||-|..|...|..|.+.|++|++++
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWN 35 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC-
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEe
Confidence 3479999999999999999999999999999
No 498
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=87.08 E-value=0.75 Score=39.43 Aligned_cols=32 Identities=19% Similarity=0.383 Sum_probs=29.1
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCC-cEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNK-KVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~-~V~iiE 145 (296)
.+..++|+|+|-+|-.++..|++.|. +|+|+.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~n 179 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFN 179 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEE
Confidence 34589999999999999999999997 799998
No 499
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=86.93 E-value=0.55 Score=40.99 Aligned_cols=29 Identities=21% Similarity=0.338 Sum_probs=27.6
Q ss_pred cEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 117 dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
+|+|+|+|..|...+..+.+.|+++++++
T Consensus 1 ~iliiG~g~~g~~~~~a~~~~G~~v~~~~ 29 (369)
T 3aw8_A 1 MIGILGGGQLGRMLALAGYPLGLSFRFLD 29 (369)
T ss_dssp CEEEECCSHHHHHHHHHHTTBTCCEEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHcCCEEEEEe
Confidence 48999999999999999999999999999
No 500
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=86.88 E-value=0.74 Score=39.83 Aligned_cols=32 Identities=28% Similarity=0.474 Sum_probs=29.8
Q ss_pred ccccEEEECCChHHHHHHHHHHhCCCcEEEEe
Q psy7665 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFD 145 (296)
Q Consensus 114 ~~~dVvVIGgG~aG~~aA~~l~~~G~~V~iiE 145 (296)
.+..|.|||.|..|...|..++..|++|++++
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d 180 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYS 180 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEEC
Confidence 34579999999999999999999999999999
Done!