RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7665
(296 letters)
>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl
coenzyme M oxidoreductase/carboxylase {Xanthobacter sp.,
py2 [TaxId: 35809]}
Length = 261
Score = 90.0 bits (222), Expect = 8e-22
Identities = 44/182 (24%), Positives = 70/182 (38%), Gaps = 16/182 (8%)
Query: 93 ECQEVYHDGRFYDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQH 152
E E G +D N +YD IGGG+ G + +M + + D
Sbjct: 21 EILEAPDGGEVIYNVDEN-DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDR------ 73
Query: 153 GTVWGLGGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHM---KKSFTWKTLVDNVQKY 209
LGG+C + C+P LF + A T + +K K +VD +
Sbjct: 74 --WPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVGIKEVVDLFRAG 131
Query: 210 IRNLNN--NYEKELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPD 267
+ N++ + + N N A +D H V+ + A+N I+AVG P D
Sbjct: 132 RNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEA--AGKVFKAKNLILAVGAGPGTLD 189
Query: 268 IP 269
+P
Sbjct: 190 VP 191
>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase
{Escherichia coli [TaxId: 562]}
Length = 217
Score = 87.7 bits (216), Expect = 2e-21
Identities = 59/157 (37%), Positives = 84/157 (53%), Gaps = 13/157 (8%)
Query: 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHR 175
YD IGGGSGGI++ AA +K AL + LGGTCVNVGC+PKK+
Sbjct: 3 YDYIAIGGGSGGIASINRAAMYGQKCALIEA---------KELGGTCVNVGCVPKKVMWH 53
Query: 176 ASLLNE-EATTSDNFGFHMKK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKA 233
A+ + E ++GF F W+TL+ + YI ++ +YE L KN +D A
Sbjct: 54 AAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFA 113
Query: 234 VFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPDIPG 270
FVD ++ G T++A + +IA GGRP++P P
Sbjct: 114 RFVDAKTLEVNG--ETITADHILIATGGRPSHPREPA 148
Score = 28.4 bits (62), Expect = 1.0
Identities = 9/51 (17%), Positives = 21/51 (41%)
Query: 92 LECQEVYHDGRFYDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVA 142
LE V + + Y +D T + +G +G + A + ++++
Sbjct: 154 LEAAGVKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLS 204
>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase
{Plasmodium falciparum [TaxId: 5833]}
Length = 259
Score = 88.2 bits (217), Expect = 4e-21
Identities = 63/160 (39%), Positives = 89/160 (55%), Gaps = 21/160 (13%)
Query: 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHR 175
YDL VIGGGSGG++AA+ AA N KVAL + LGGTCVNVGC+PKK+
Sbjct: 2 YDLIVIGGGSGGMAAARRAARHNAKVALVEK---------SRLGGTCVNVGCVPKKIMFN 52
Query: 176 ASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVF 235
A+ +++ S ++GF K SF LV+ KYI+ LNN Y + L K+K+D + A F
Sbjct: 53 AASVHDILENSRHYGFDTKFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASF 112
Query: 236 VDKHRVKF------------AGEERTVSAQNFIIAVGGRP 263
+ ++R+ E + +N +IAVG +P
Sbjct: 113 LSENRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKP 152
>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide
dehydrogenase {Neisseria meningitidis [TaxId: 487]}
Length = 229
Score = 86.1 bits (212), Expect = 1e-20
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 9/128 (7%)
Query: 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLF 173
+YD+ V+GGG GG SAA AA KVA+ + LGG C+NVGCIP K
Sbjct: 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKT--------LGGVCLNVGCIPSKAL 56
Query: 174 HRASLLNEEATTSDNFGFHMKK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK 232
+ + +E G + L + L + K+D
Sbjct: 57 LHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGD 116
Query: 233 AVFVDKHR 240
F+D H
Sbjct: 117 GQFLDPHH 124
>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 221
Score = 83.0 bits (204), Expect = 1e-19
Identities = 45/157 (28%), Positives = 64/157 (40%), Gaps = 13/157 (8%)
Query: 113 TYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKL 172
+ + D+ +IGGG GG AA +AA + K + LGGTC+NVGCIP K
Sbjct: 1 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGA--------LGGTCLNVGCIPSKA 52
Query: 173 FHRASLLNEEATTS-DNFGFHMKK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFN 230
+S + EA S N G + ++ K + NL E +KNK+ Y
Sbjct: 53 LLHSSHMYHEAKHSFANHGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVK 112
Query: 231 AKAVFVDKHRVKFAGEERTV---SAQNFIIAVGGRPT 264
FV + E ++ IIA G
Sbjct: 113 GYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVK 149
>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 221
Score = 81.9 bits (201), Expect = 4e-19
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLF 173
YD VIGGGSGG+++A+ AA + + A+ + LGGTCVNVGC+PKK+
Sbjct: 2 ASYDYLVIGGGSGGLASARRAAELGARAAVVES---------HKLGGTCVNVGCVPKKVM 52
Query: 174 HRASLLNEEATTSDNFGFHMKK-SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK 232
++ +E ++GF + F W+ + + Y+ LN Y+ L K+ I+
Sbjct: 53 WNTAVHSEFMHDHADYGFPSCEGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH 112
Query: 233 AVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPD 267
A F + + +A + +IA GG P+ P
Sbjct: 113 AAFTSDPKPTIEVSGKKYTAPHILIATGGMPSTPH 147
>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 223
Score = 80.3 bits (197), Expect = 1e-18
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 114 YDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLF 173
+ + V+G G GG AA AA + +KV + + LGG C+NVGCIP K
Sbjct: 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEK---------GNLGGVCLNVGCIPSKAL 52
Query: 174 HRASLLNEEATTSDNF-GFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK 232
AS E+A S+ + + + + ++ L E L+ NK++ +
Sbjct: 53 ISASHRYEQAKHSEEMGIKAENVTIDFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGE 112
Query: 233 AVFVDKHR--VKFAGEERTVSAQNFIIAVGGRPTY 265
A FVD + V +T + +N IIA G RP
Sbjct: 113 AYFVDANTVRVVNGDSAQTYTFKNAIIATGSRPIE 147
>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin
reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 235
Score = 79.0 bits (193), Expect = 6e-18
Identities = 76/161 (47%), Positives = 104/161 (64%), Gaps = 5/161 (3%)
Query: 113 TYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKL 172
+YD+DL +IGGGSGG++AAKEAA +KKV + DFVTP+ GT WGLGGTCVNVGCIPKKL
Sbjct: 1 SYDFDLIIIGGGSGGLAAAKEAAKFDKKVMVLDFVTPTPLGTNWGLGGTCVNVGCIPKKL 60
Query: 173 FHRASLLNEEATTSDNFGFHMKK--SFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFN 230
H+A+LL + S N+G+ ++ W+ + ++VQ +I +LN Y L + K+ Y N
Sbjct: 61 MHQAALLGQALKDSRNYGWKLEDTVKHDWEKMTESVQNHIGSLNWGYRVALREKKVVYEN 120
Query: 231 AKAVFVDK---HRVKFAGEERTVSAQNFIIAVGGRPTYPDI 268
A F+ G+E+ SA+ F+IA G RP Y I
Sbjct: 121 AYGKFIGPHKIMATNNKGKEKVYSAERFLIATGERPRYLGI 161
>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 220
Score = 77.0 bits (188), Expect = 3e-17
Identities = 34/160 (21%), Positives = 57/160 (35%), Gaps = 15/160 (9%)
Query: 112 QTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKK 171
QT L +IGGG GG AA A + L + LGGTC+N+GCIP K
Sbjct: 2 QTIQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG---------QALGGTCLNIGCIPSK 52
Query: 172 LFHRASLLNEEATTSDNFGFHM----KKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKID 227
+ +A+ V + L L+K+ +
Sbjct: 53 ALIHVAEQFHQASRFTEPSPLGISVASPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVK 112
Query: 228 YFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPD 267
+ A +D +V+ + + + ++ ++A G
Sbjct: 113 VVHGWAKVLDGKQVEV--DGQRIQCEHLLLATGSSSVELP 150
>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase
{Crithidia fasciculata [TaxId: 5656]}
Length = 240
Score = 73.8 bits (180), Expect = 4e-16
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 113 TYDYDLCVIGGGSGGISAAKEAASMN-KKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKK 171
+ YDL VIG GSGG+ A AAS++ K+VA+ D LGGTCVNVGC+PKK
Sbjct: 1 SRAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKK 60
Query: 172 LFHRASLLNEEATTSDNFGFHMKKS---FTWKTLVDNVQKYIRNLNNNYEKELEKNK-ID 227
L + + S FG+ + + WK L+ K + +N++YE + +
Sbjct: 61 LMVTGANYMDTIRESAGFGWELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLT 120
Query: 228 YFNAKAVFVD-------KHRVKFAGEERTVSAQNFIIAVGGRPTYPDIP 269
+ D + + T+ + ++A G P + I
Sbjct: 121 FHQGFGALQDNHTVLVRESADPNSAVLETLDTEYILLATGSWPQHLGIE 169
>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 73.8 bits (180), Expect = 4e-16
Identities = 40/176 (22%), Positives = 63/176 (35%), Gaps = 28/176 (15%)
Query: 113 TYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKL 172
+D+ +IGGG G AA +AA + A + LGGTC+NVGCIP K
Sbjct: 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGK--------LGGTCLNVGCIPSKA 54
Query: 173 FHRASLLNEEATTSDN---FGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYF 229
S L + T + ++ L E +KNK+ Y+
Sbjct: 55 LLNNSHLFHQMHTEAQKRGIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYY 114
Query: 230 NAKAVFVDKHRVKFAGE---------ERTVSAQNFII--------AVGGRPTYPDI 268
F D+ +++ + + +N I+ VG RP +
Sbjct: 115 KGNGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFVGRRPYIAGL 170
>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase
{Trypanosoma cruzi [TaxId: 5693]}
Length = 238
Score = 71.6 bits (174), Expect = 2e-15
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 5/130 (3%)
Query: 116 YDLCVIGGGSGGISAAKEAASMN-KKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFH 174
+DL VIG GSGG+ AA AA++ K+VA+ D LGGTCVNVGC+PKKL
Sbjct: 4 FDLVVIGAGSGGLEAAWNAATLYKKRVAVIDVQMVHGPPFFSALGGTCVNVGCVPKKLMV 63
Query: 175 RASLLNEEATTSDNFGFHMKKS---FTWKTLVDNVQKYIRNLNNNYEKEL-EKNKIDYFN 230
+ E S FG+ ++ WK L+ + + N+N +Y++ + +++F
Sbjct: 64 TGAQYMEHLRESAGFGWEFDRTTLRAEWKNLIAVKDEAVLNINKSYDEMFRDTEGLEFFL 123
Query: 231 AKAVFVDKHR 240
K+
Sbjct: 124 GWGSLESKNV 133
>d1xdia1 c.3.1.5 (A:2-161,A:276-348) Dihydrolipoamide dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 233
Score = 64.3 bits (155), Expect = 8e-13
Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 18/162 (11%)
Query: 117 DLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRA 176
+ ++GGG G AA AA+ + + + G+GG V C+P K F +
Sbjct: 3 RIVILGGGPAGYEAALVAATSHPETTQVTVIDCD------GIGGAAVLDDCVPSKTFIAS 56
Query: 177 SLLNEEATTSDNFGFH---MKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKA 233
+ L E + + GFH + + V+ + + +L + +
Sbjct: 57 TGLRTELRRAPHLGFHIDFDDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRG 116
Query: 234 VFVDKHRVKFA---------GEERTVSAQNFIIAVGGRPTYP 266
+D G A ++A G P
Sbjct: 117 ELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRIL 158
>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 229
Score = 61.2 bits (147), Expect = 9e-12
Identities = 24/134 (17%), Positives = 47/134 (35%)
Query: 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHR 175
+D+ VIG G GG AA ++A + K AL + + T G V L
Sbjct: 4 FDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSS 63
Query: 176 ASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVF 235
+ + + + T++ + +RNL ++ N + F
Sbjct: 64 YKFHEAHESFKLHGISTGEVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKL 123
Query: 236 VDKHRVKFAGEERT 249
+ +V+ + +
Sbjct: 124 LAGKKVEVTAADGS 137
Score = 25.8 bits (55), Expect = 6.7
Identities = 13/51 (25%), Positives = 19/51 (37%)
Query: 92 LECQEVYHDGRFYDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVA 142
V D R + Y+D+ T + IG G A +A+ VA
Sbjct: 168 AADSGVTLDERGFIYVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVVVA 218
>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933
{Haemophilus influenzae [TaxId: 727]}
Length = 253
Score = 55.3 bits (132), Expect = 1e-09
Identities = 26/164 (15%), Positives = 47/164 (28%), Gaps = 16/164 (9%)
Query: 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTC--VNVGCIPKKLF 173
+ +IG G+ G+ A + A + K V +FD + GG C N+ P
Sbjct: 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYL 64
Query: 174 HRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKA 233
+ + A + + + E+ +E K + A
Sbjct: 65 SQNPHFVKSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGA 124
Query: 234 VFVDKHRVK--------------FAGEERTVSAQNFIIAVGGRP 263
+ + V +N I+A GG
Sbjct: 125 KILLRSEVSQVERIQNDEKVRFVLQVNSTQWQCKNLIVATGGLS 168
>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus
cereus [TaxId: 1396]}
Length = 251
Score = 53.5 bits (127), Expect = 5e-09
Identities = 33/167 (19%), Positives = 53/167 (31%), Gaps = 17/167 (10%)
Query: 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFH 174
YD+ VIGGG G+ AA AA V L D GG C +P
Sbjct: 2 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIV 61
Query: 175 RASLLNEEATTSDNFGFHMKKSFTW---------------KTLVDNVQKYIRNLNNNYEK 219
+ N S F+ + T+ V N + + + K
Sbjct: 62 KHIPGNGRFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLK 121
Query: 220 ELEKNKIDYFNAKAVFVDKHRVKFAGEE--RTVSAQNFIIAVGGRPT 264
+L + + + + K + + + +IAVGG+
Sbjct: 122 DLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKSV 168
>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale
cress(Arabidopsis thaliana) [TaxId: 3702]}
Length = 278
Score = 51.4 bits (122), Expect = 3e-08
Identities = 29/180 (16%), Positives = 61/180 (33%), Gaps = 20/180 (11%)
Query: 106 YLDNNFQTYDYDLCVIGGGSGGISAAKEAASM-NKKVALFDFVTPSQHGTVWGLGGTCVN 164
Y+ + + D+ V+G GS G+SAA E + N +VA+ + Q + GG
Sbjct: 24 YMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIE-----QSVS---PGGGAWL 75
Query: 165 VGCIPKKLFHRASL------LNEEATTSDNFGFHMKKSFTWKTLVDNVQKY----IRNLN 214
G + + R + D + + T++ + + N
Sbjct: 76 GGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAV 135
Query: 215 NNYEKELEKNKIDYFNAKAVFVD-KHRVKFAGEERTVSAQNFIIAVGGRPTYPDIPGARL 273
+ ++ N++ V H + + + A+ + + G + RL
Sbjct: 136 AAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRL 195
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide
dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId:
9913]}
Length = 336
Score = 49.8 bits (117), Expect = 1e-07
Identities = 14/128 (10%), Positives = 35/128 (27%), Gaps = 8/128 (6%)
Query: 113 TYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKL 172
+YD+ V+G G + + KKV D ++ GG ++ + +
Sbjct: 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMD-----RNPYY---GGESSSITPLEELY 55
Query: 173 FHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAK 232
L T +++ + + K + + + + +
Sbjct: 56 KRFQLLEGPPETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKG 115
Query: 233 AVFVDKHR 240
Sbjct: 116 GKIYKVPS 123
>d1ebda3 d.87.1.1 (A:347-461) Dihydrolipoamide dehydrogenase
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 115
Score = 46.6 bits (110), Expect = 2e-07
Identities = 14/49 (28%), Positives = 19/49 (38%)
Query: 10 EVSTFITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
E I A+I NA ++ L + G +D I HPT E
Sbjct: 59 EDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEIA 107
>d1h6va3 d.87.1.1 (A:367-499) Mammalian thioredoxin reductase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 133
Score = 46.7 bits (110), Expect = 2e-07
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 17 AEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
+ NAGE+TQG+A + G KQ D+ IGIHP CAE
Sbjct: 72 FHVLGPNAGEVTQGFAAALKCGLTKQQLDSTIGIHPVCAEIF 113
>d1feca3 d.87.1.1 (A:358-485) Trypanothione reductase {Crithidia
fasciculata [TaxId: 5656]}
Length = 128
Score = 46.2 bits (109), Expect = 4e-07
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 17 AEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
+ +++ EI Q A+ + +GA DF IG+HPT AE +
Sbjct: 69 VHMLGDSSPEIIQSVAICLKMGAKISDFYNTIGVHPTSAEEL 110
>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase
{Escherichia coli [TaxId: 562]}
Length = 330
Score = 48.3 bits (114), Expect = 4e-07
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 110 NFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVG 166
++D VIG G G+ AA + + + AL V P++ TV GG V +G
Sbjct: 2 KLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALG 58
>d1v59a3 d.87.1.1 (A:356-478) Dihydrolipoamide dehydrogenase
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 123
Score = 45.0 bits (106), Expect = 7e-07
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 17 AEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
A I NAGE+ L + GA +D + HPT +EA
Sbjct: 68 AHIIGPNAGEMIAEAGLALEYGASAEDVARVCHAHPTLSEAF 109
>d1onfa3 d.87.1.1 (A:377-495) Glutathione reductase {Plasmodium
falciparum [TaxId: 5833]}
Length = 119
Score = 44.4 bits (104), Expect = 1e-06
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 17 AEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
I NA EI QG+A+ + + A K+DFD I IHPT AE
Sbjct: 74 LHIIGLNADEIVQGFAVALKMNATKKDFDETIPIHPTAAEEF 115
>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia
coli [TaxId: 562]}
Length = 311
Score = 46.1 bits (108), Expect = 2e-06
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 112 QTYDYDLCVIGGGSGGISAAKEAA--SMNKKVALFDFVTPSQHGTVWGLGGTCVNVG 166
QT+ DL ++G G G+ AA AA + N K+AL V P + TV GG+
Sbjct: 2 QTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQ 58
>d1ojta3 d.87.1.1 (A:471-598) Dihydrolipoamide dehydrogenase
{Neisseria meningitidis [TaxId: 487]}
Length = 128
Score = 44.2 bits (104), Expect = 2e-06
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 17 AEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
I N G++ L + +G D I HPT E+I
Sbjct: 68 GGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHPHPTLGESI 109
>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella
succinogenes [TaxId: 844]}
Length = 336
Score = 45.9 bits (107), Expect = 2e-06
Identities = 12/55 (21%), Positives = 20/55 (36%)
Query: 112 QTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVG 166
+ D VIGGG G+ AA + + + + GG ++G
Sbjct: 2 KVQYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSAAAQGGMQASLG 56
>d1lvla3 d.87.1.1 (A:336-458) Dihydrolipoamide dehydrogenase
{Pseudomonas putida [TaxId: 303]}
Length = 123
Score = 43.2 bits (101), Expect = 3e-06
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 17 AEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
+ E++ +A + +GA +D I HPT EA+
Sbjct: 68 WQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGEAV 109
>d1gesa3 d.87.1.1 (A:336-450) Glutathione reductase {Escherichia
coli [TaxId: 562]}
Length = 115
Score = 42.9 bits (100), Expect = 4e-06
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 17 AEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
E+ QG+A+ + +GA K+DFD + IHPT AE
Sbjct: 70 IHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEF 111
>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 317
Score = 45.4 bits (106), Expect = 4e-06
Identities = 13/87 (14%), Positives = 21/87 (24%)
Query: 113 TYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKL 172
+ + V+G GS G +A+ A V L D S ++ GG
Sbjct: 17 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAH 76
Query: 173 FHRASLLNEEATTSDNFGFHMKKSFTW 199
+
Sbjct: 77 GVEDKVEWFIEDAMKGGRQQNDIKLVT 103
>d3grsa3 d.87.1.1 (A:364-478) Glutathione reductase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 115
Score = 42.5 bits (99), Expect = 6e-06
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 17 AEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
+ E+ QG+A+ V +GA K DFD + IHPT +E +
Sbjct: 70 IHMQGLGCDEMLQGFAVAVKMGATKADFDNTVAIHPTSSEEL 111
>d1xdia2 d.87.1.1 (A:349-466) Dihydrolipoamide dehydrogenase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 118
Score = 42.0 bits (98), Expect = 8e-06
Identities = 7/45 (15%), Positives = 18/45 (40%)
Query: 14 FITAEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
I + + A E+ A+ V + + ++P+ + +I
Sbjct: 65 VIGGVVVAPIASELILPIAVAVQNRITVNELAQTLAVYPSLSGSI 109
>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
frigidimarina [TaxId: 56812]}
Length = 308
Score = 44.2 bits (103), Expect = 9e-06
Identities = 17/85 (20%), Positives = 21/85 (24%)
Query: 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFH 174
D+ V+G G G SAA A KV L + GG K
Sbjct: 16 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKI 75
Query: 175 RASLLNEEATTSDNFGFHMKKSFTW 199
S T +
Sbjct: 76 TDSPELMFEDTMKGGQNINDPALVK 100
>d3lada3 d.87.1.1 (A:349-472) Dihydrolipoamide dehydrogenase
{Azotobacter vinelandii [TaxId: 354]}
Length = 124
Score = 41.8 bits (98), Expect = 1e-05
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 17 AEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
+ +A E+ Q A+ + G +D ++ HP +EA+
Sbjct: 68 VHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFAHPALSEAL 109
>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3
(respiratory fumarate reductase) {Shewanella
putrefaciens [TaxId: 24]}
Length = 322
Score = 43.0 bits (100), Expect = 2e-05
Identities = 16/62 (25%), Positives = 21/62 (33%)
Query: 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHR 175
D+ +IG G G++AA A KV L + T GG KL
Sbjct: 24 TDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIE 83
Query: 176 AS 177
Sbjct: 84 DK 85
>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus
thermophilus [TaxId: 274]}
Length = 230
Score = 41.5 bits (97), Expect = 5e-05
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 116 YDLCVIGGGSGGISAAKEAASMNKKVALF 144
Y + ++G G G A A +V L
Sbjct: 3 YQVLIVGAGFSGAETAFWLAQKGVRVGLL 31
>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus
sp., strain b0618 [TaxId: 1409]}
Length = 281
Score = 41.6 bits (96), Expect = 5e-05
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCV 163
+D+ V+G GS G++A + A K L D P +
Sbjct: 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRII 51
>d1dxla3 d.87.1.1 (A:348-470) Dihydrolipoamide dehydrogenase {Garden
pea (Pisum sativum) [TaxId: 3888]}
Length = 123
Score = 39.9 bits (93), Expect = 5e-05
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 17 AEISSNNAGEITQGYALGVMLGAYKQDFDALIGIHPTCAEAI 58
I + NAGE+ A+ + A +D + HPT +EAI
Sbjct: 68 VHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAI 109
>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase
{Escherichia coli [TaxId: 562]}
Length = 305
Score = 41.4 bits (96), Expect = 6e-05
Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 109 NNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVG 166
N + D+ +IG G+ G+S A A +V + ++ T + GG
Sbjct: 1 NTLPEHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFD 57
>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase
{Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 192
Score = 40.7 bits (94), Expect = 6e-05
Identities = 27/176 (15%), Positives = 47/176 (26%), Gaps = 26/176 (14%)
Query: 112 QTYDYDLCVIGGGSGGISAAKEAASMNKKVALFD------------FVTPSQHGTVWGLG 159
+T++ LC++G G +AA AA K LF+ T + G
Sbjct: 2 ETHNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFP 61
Query: 160 GTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLN----- 214
+ V K T + K F T + L
Sbjct: 62 EGILGVELTDKFRKQSERFGTTIFTETVTKVDFSSKPFKLFTDSKAILADAVILAIGAVA 121
Query: 215 --NNYEKELEKNKIDYFNAKAVFVDKHRVKF-------AGEERTVSAQNFIIAVGG 261
+ + ++ + V + AG+ + + I A G
Sbjct: 122 KGHEPATKFLDGGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGT 177
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation
inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 297
Score = 41.3 bits (95), Expect = 6e-05
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145
DYD+ V+G G + + KKV D
Sbjct: 5 DYDVIVLGTGITECILSGLLSVDGKKVLHID 35
>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 311
Score = 41.5 bits (96), Expect = 7e-05
Identities = 18/137 (13%), Positives = 32/137 (23%), Gaps = 7/137 (5%)
Query: 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFH 174
D+ ++G GS G+SAA A + + + GG G + +
Sbjct: 50 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA------PGGGSWLGGQLFSAMVM 103
Query: 175 RASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELE-KNKIDYFNAKA 233
R + + + L K D
Sbjct: 104 RKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPP 163
Query: 234 VFVDKHRVKFAGEERTV 250
+ V T+
Sbjct: 164 TEKGEVTVAGVVTNWTL 180
>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus
sp. [TaxId: 1409]}
Length = 276
Score = 40.9 bits (94), Expect = 1e-04
Identities = 19/85 (22%), Positives = 29/85 (34%)
Query: 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFH 174
Y+ VIGGG G + A A NK ALF+ T T G + C + F
Sbjct: 4 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFF 63
Query: 175 RASLLNEEATTSDNFGFHMKKSFTW 199
++ ++ +
Sbjct: 64 DFAMHSQRLYKGLGEELYALSGVDI 88
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea
mays) [TaxId: 4577]}
Length = 347
Score = 40.7 bits (93), Expect = 1e-04
Identities = 19/151 (12%), Positives = 44/151 (29%), Gaps = 10/151 (6%)
Query: 117 DLCVIGGGSGGISAAKEAASMN-KKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHR 175
+ V+G G GISAAK + + + + + GG +
Sbjct: 2 RVIVVGAGMSGISAAKRLSEAGITDLLILE-----ATDHI---GGRMHKTNFAGINVELG 53
Query: 176 ASLLNEEATTSDNFGF-HMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAV 234
A+ + N + + + + + +N+ +++ + A
Sbjct: 54 ANWVEGVNGGKMNPIWPIVNSTLKLRNFRSDFDYLAQNVYKEDGGVYDEDYVQKRIELAD 113
Query: 235 FVDKHRVKFAGEERTVSAQNFIIAVGGRPTY 265
V++ K + + I R
Sbjct: 114 SVEEMGEKLSATLHASGRDDMSILAMQRLNE 144
>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A
subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 356
Score = 40.7 bits (94), Expect = 1e-04
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 112 QTYDYDLCVIGGGSGGISAAKEAASMNK----KVALFDFVTPSQHGTVWGLGGTCVNVG 166
+ + D+ +IGGG G AA EAA K KV L + + G V G + +N
Sbjct: 18 EVVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQ-GLSAINTY 75
>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase
subunit F (AhpF), C-terminal domains {Escherichia coli
[TaxId: 562]}
Length = 184
Score = 39.3 bits (90), Expect = 2e-04
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145
YD+ ++G G G +AA +A + L
Sbjct: 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMG 31
>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase
{Escherichia coli [TaxId: 562]}
Length = 190
Score = 38.6 bits (89), Expect = 3e-04
Identities = 16/81 (19%), Positives = 22/81 (27%), Gaps = 2/81 (2%)
Query: 113 TYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHG--TVWGLGGTCVNVGCIPK 170
T L ++G G G +AA AA N + L + T
Sbjct: 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGP 62
Query: 171 KLFHRASLLNEEATTSDNFGF 191
L R + T F
Sbjct: 63 LLMERMHEHATKFETEIIFDH 83
>d1mo9a3 d.87.1.1 (A:384-523) NADH-dependent 2-ketopropyl coenzyme M
oxidoreductase/carboxylase {Xanthobacter sp., py2
[TaxId: 35809]}
Length = 140
Score = 37.4 bits (86), Expect = 4e-04
Identities = 7/45 (15%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Query: 17 AEISSNNAGEITQGYALGVMLGAYKQDFDALIGI--HPTCAEAIS 59
A A + Q + + G + + + +PT +S
Sbjct: 84 AHHVGYGAKDAFQYLNVLIKQGLTVDELGDMDELFLNPTHFIQLS 128
>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 298
Score = 37.9 bits (87), Expect = 8e-04
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 116 YDLCVIGGGSGGISAAKEAASMNKKVALFD 145
YD ++G G G A E +NKKV + +
Sbjct: 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIE 31
>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot
fungus (Peniophora sp. SG) [TaxId: 204723]}
Length = 379
Score = 37.6 bits (86), Expect = 0.001
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 116 YDLCVIGGGSGGISAAKEAASMNKKVAL 143
YD+ ++G G G + A+E KVA+
Sbjct: 5 YDVVIVGSGPIGCTYARELVGAGYKVAM 32
>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human
(Homo sapiens) [TaxId: 9606]}
Length = 383
Score = 37.0 bits (84), Expect = 0.002
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145
D+ V+GGG G++AAK V + +
Sbjct: 1 DVVVVGGGISGMAAAKLLHDSGLNVVVLE 29
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase
{Myxococcus xanthus [TaxId: 34]}
Length = 347
Score = 35.5 bits (80), Expect = 0.006
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145
++ V+GGG G++ A S L +
Sbjct: 2 NVAVVGGGISGLAVAHHLRSRGTDAVLLE 30
>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase
{Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 373
Score = 35.2 bits (79), Expect = 0.008
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 119 CVIGGGSGGISAAKEAASMNKKVALFD 145
VIG G G++AA + V +F+
Sbjct: 5 AVIGAGVSGLAAAYKLKIHGLNVTVFE 31
>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase
{Thermobifida fusca [TaxId: 2021]}
Length = 298
Score = 34.4 bits (78), Expect = 0.010
Identities = 7/31 (22%), Positives = 15/31 (48%)
Query: 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFD 145
+ D+ V+G G G+ A + + V + +
Sbjct: 7 EVDVLVVGAGFSGLYALYRLRELGRSVHVIE 37
>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan
pit viper (Calloselasma rhodostoma) [TaxId: 8717]}
Length = 370
Score = 34.3 bits (77), Expect = 0.012
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 117 DLCVIGGGSGGISAAKEAASMNKKVALFD 145
+ ++G G G+SAA A +V + +
Sbjct: 32 HVVIVGAGMAGLSAAYVLAGAGHQVTVLE 60
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer
flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus
scrofa) [TaxId: 9823]}
Length = 380
Score = 34.4 bits (78), Expect = 0.014
Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 6/39 (15%)
Query: 113 TYDYDLCVIGGGSGGISAAKEAASMNK------KVALFD 145
+ D+ ++G G G+SAA + +V L +
Sbjct: 30 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVE 68
>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC
family {Brevibacterium sterolicum [TaxId: 1702]}
Length = 370
Score = 34.1 bits (77), Expect = 0.018
Identities = 8/28 (28%), Positives = 9/28 (32%)
Query: 116 YDLCVIGGGSGGISAAKEAASMNKKVAL 143
VIG G GG AA +
Sbjct: 8 VPALVIGSGYGGAVAALRLTQAGIPTQI 35
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 33.9 bits (76), Expect = 0.020
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 115 DYDLCVIGGGSGGISAAKEAASMNKKVAL 143
YD ++G G GGI AA + KKV L
Sbjct: 2 PYDYIIVGAGPGGIIAADRLSEAGKKVLL 30
>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC
family {Streptomyces sp. [TaxId: 1931]}
Length = 367
Score = 33.0 bits (74), Expect = 0.038
Identities = 6/28 (21%), Positives = 9/28 (32%)
Query: 116 YDLCVIGGGSGGISAAKEAASMNKKVAL 143
VIG G G +A + +
Sbjct: 3 VPAVVIGTGYGAAVSALRLGEAGVQTLM 30
>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium
amagasakiense [TaxId: 63559]}
Length = 391
Score = 33.0 bits (74), Expect = 0.044
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 112 QTYDYDLCVIGGGSGG-ISAAKEAASMNKKVAL 143
+TYDY + GGG G AAK + KV +
Sbjct: 23 KTYDY--IIAGGGLTGLTVAAKLTENPKIKVLV 53
>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus
niger [TaxId: 5061]}
Length = 385
Score = 32.9 bits (74), Expect = 0.045
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Query: 112 QTYDYDLCVIGGGSGGISAAKE-AASMNKKVAL 143
+T DY + GGG G++ A + N V +
Sbjct: 16 RTVDY--IIAGGGLTGLTTAARLTENPNISVLV 46
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId:
1423]}
Length = 134
Score = 31.4 bits (70), Expect = 0.054
Identities = 21/111 (18%), Positives = 32/111 (28%), Gaps = 3/111 (2%)
Query: 120 VIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLL 179
VIG G G S KE M +V D + + V + +
Sbjct: 5 VIGLGRFGGSIVKELHRMGHEVLAVD-INEEKVNAYASYATHAVIANATEENELLSLGIR 63
Query: 180 NEEATTS--DNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDY 228
N E + +D +++ N + K LEK D
Sbjct: 64 NFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKAQNYYHHKVLEKIGADR 114
>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase
{Arthrobacter globiformis [TaxId: 1665]}
Length = 305
Score = 32.4 bits (72), Expect = 0.055
Identities = 9/49 (18%), Positives = 16/49 (32%), Gaps = 2/49 (4%)
Query: 116 YDLCVIGGGSGGISAAKEAASMN-KKVALFD-FVTPSQHGTVWGLGGTC 162
+ +IG G G + A E + + + D G+ G
Sbjct: 2 PRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLV 50
>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas
putida [TaxId: 303]}
Length = 195
Score = 31.7 bits (71), Expect = 0.063
Identities = 13/55 (23%), Positives = 18/55 (32%)
Query: 159 GGTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNL 213
G G + + + S FG KS ++ T V KY R L
Sbjct: 133 AGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRAL 187
>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone
demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 449
Score = 32.2 bits (71), Expect = 0.064
Identities = 29/185 (15%), Positives = 53/185 (28%), Gaps = 11/185 (5%)
Query: 119 CVIGGGSGGISAAKEAASMNKKVALF---DFV-----TPSQHGTVWGLGGTCVNVGCIPK 170
+IG G G++AA++ S V L D V T + V LG V G
Sbjct: 9 IIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVT-GLGGN 67
Query: 171 KLFHRASLLNEEATTSDNFG--FHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDY 228
+ + +N E + K + V++ L + +
Sbjct: 68 PMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNV 127
Query: 229 FNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTYPDIPGARLLRTLSLLSGVDPPTL 288
N K V + + + I + L + ++L +
Sbjct: 128 LNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQ 187
Query: 289 IFLEH 293
+ E
Sbjct: 188 QYKEA 192
>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase,
N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}
Length = 314
Score = 32.1 bits (72), Expect = 0.066
Identities = 6/28 (21%), Positives = 13/28 (46%)
Query: 118 LCVIGGGSGGISAAKEAASMNKKVALFD 145
+ ++G G G ++ A +V + D
Sbjct: 5 ILIVGAGFSGAVIGRQLAEKGHQVHIID 32
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal
domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 246
Score = 31.4 bits (70), Expect = 0.091
Identities = 12/66 (18%), Positives = 14/66 (21%), Gaps = 5/66 (7%)
Query: 119 CVIGGGSGGISAAKEAASMNKKVALFDFVT-----PSQHGTVWGLGGTCVNVGCIPKKLF 173
VIG G G+S A V V + T G P
Sbjct: 4 VVIGAGVIGLSTALCIHERYHSVLQPLDVKVYADRFTPFTTTDVAAGLWQPYTSEPSNPQ 63
Query: 174 HRASLL 179
Sbjct: 64 EANWNQ 69
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase,
PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Length = 292
Score = 30.7 bits (68), Expect = 0.18
Identities = 16/166 (9%), Positives = 40/166 (24%), Gaps = 19/166 (11%)
Query: 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPS-----------QHGTV-----WGLG 159
+ +IG G G+ + + + TP + G V G+
Sbjct: 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVD 62
Query: 160 GTCVNVGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEK 219
G + + + + G + + ++ +
Sbjct: 63 RRMARDGLVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVY 122
Query: 220 ELEKNKIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRPTY 265
+ + ++ + +V R GE + G
Sbjct: 123 QAAEVRLHDLQGERPYVTFER---DGERLRLDCDYIAGCDGFHGIS 165
>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 162
Score = 29.9 bits (66), Expect = 0.26
Identities = 20/156 (12%), Positives = 42/156 (26%), Gaps = 15/156 (9%)
Query: 105 DYLDNNFQTYDYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVN 164
D L + + + +IG G G A + + + ++ G
Sbjct: 20 DVLRDKAPVGN-KVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWG----------- 67
Query: 165 VGCIPKKLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKN 224
I L L + + + + K ++
Sbjct: 68 ---IDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVK 124
Query: 225 KIDYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVG 260
I + + + D V GE + ++ N +I G
Sbjct: 125 MIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAG 160
>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase
SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}
Length = 335
Score = 30.4 bits (67), Expect = 0.27
Identities = 20/124 (16%), Positives = 39/124 (31%), Gaps = 5/124 (4%)
Query: 119 CVIGGGSGGISAAKE--AASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRA 176
+IG G G+ AK A +V LF+ G VW T N +P
Sbjct: 8 AIIGAGPSGLVTAKALLAEKAFDQVTLFE--RRGSPGGVWNYTSTLSNKLPVPSTNPILT 65
Query: 177 SLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKI-DYFNAKAVF 235
+ + + + T ++ + ++ + ++ I +Y A
Sbjct: 66 TEPIVGPAALPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQP 125
Query: 236 VDKH 239
+
Sbjct: 126 LLPF 129
>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase,
N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}
Length = 268
Score = 30.0 bits (66), Expect = 0.29
Identities = 9/44 (20%), Positives = 14/44 (31%), Gaps = 1/44 (2%)
Query: 119 CVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTC 162
V+G G G+S+A A V + P +
Sbjct: 10 VVLGSGVIGLSSALILARKGYSVHILARDLPE-DVSSQTFASPW 52
>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine
dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 196
Score = 29.3 bits (64), Expect = 0.40
Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 119 CVIGGGSGGISAAKEAASMN-KKVALFD 145
++G G IS A A + + +F+
Sbjct: 8 ALLGAGPASISCASFLARLGYSDITIFE 35
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline
dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Length = 184
Score = 29.1 bits (64), Expect = 0.45
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 119 CVIGGGSGGISAAKEAASMNKKVALFD 145
V+G G+GG + A A + V +D
Sbjct: 5 AVLGLGNGGHAFAAYLALKGQSVLAWD 31
>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase,
middle domain {Methylophilus methylotrophus, w3a1
[TaxId: 17]}
Length = 233
Score = 29.0 bits (63), Expect = 0.55
Identities = 13/116 (11%), Positives = 29/116 (25%), Gaps = 1/116 (0%)
Query: 115 DYDLCVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFH 174
+ ++G G G AA+ V L D G + + + +
Sbjct: 49 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDT-AEKIGGHLNQVAALPGLGEWSYHRDYR 107
Query: 175 RASLLNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFN 230
+ ++ +K T ++ + E L +
Sbjct: 108 ETQITKLLKKNKESQLALGQKPMTADDVLQYGADKVIIATGASECTLWNELKARES 163
Score = 26.3 bits (56), Expect = 4.4
Identities = 9/68 (13%), Positives = 18/68 (26%), Gaps = 1/68 (1%)
Query: 76 HTPYLVLAKARFLLPTLECQEVYHDGRFYDYLDNNFQTYDYDLCVIGGGSGGISAAKEAA 135
A L L+ +E + + + G A+E
Sbjct: 142 KVIIATGASECTLWNELKARESEWAENDIKGIYLIGD-AEAPRLIADATFTGHRVAREIE 200
Query: 136 SMNKKVAL 143
N ++A+
Sbjct: 201 EANPQIAI 208
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase
DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Length = 265
Score = 28.9 bits (63), Expect = 0.57
Identities = 19/154 (12%), Positives = 46/154 (29%), Gaps = 12/154 (7%)
Query: 119 CVIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASL 178
V+GG G++AA V +++ + GT + V +
Sbjct: 8 AVVGGSISGLTAALMLRDAGVDVDVYE-----RSPQPLSGFGTGIVVQPELVHYLLEQGV 62
Query: 179 LNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKID--YFNAKAVFV 236
+ + + ++ + + ++ Y E + + + V +
Sbjct: 63 ELDSISVPSSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGL 122
Query: 237 ----DKHRVKFAGEERTVSAQNFIIAVGGRPTYP 266
+ +++F+ A I A GG
Sbjct: 123 SQDSETVQMRFSDGT-KAEANWVIGADGGASVVR 155
>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond
(Prunus dulcis) [TaxId: 3755]}
Length = 351
Score = 29.1 bits (64), Expect = 0.67
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Query: 113 TYDYDLCVIGGGSGGISAAKEAASMNKKVAL 143
+YDY ++GGG+ G A S KV +
Sbjct: 26 SYDY--VIVGGGTSGCPLAAT-LSEKYKVLV 53
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living
yeast (Trichosporon cutaneum) [TaxId: 5554]}
Length = 360
Score = 28.9 bits (63), Expect = 0.77
Identities = 17/157 (10%), Positives = 42/157 (26%), Gaps = 16/157 (10%)
Query: 116 YDLCVIGGGSGGISAAKEAASMNKKVALFDFV------TPSQHGTVWGLGGTCVNVGCIP 169
D+ ++G G G+ AA+ + ++ T +G GL +
Sbjct: 8 CDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTL------ 61
Query: 170 KKLFHRASL---LNEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKI 226
+ L + EA + D + + ++ ++ L + +I
Sbjct: 62 -ESLKNLGLADKILSEANDMSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRI 120
Query: 227 DYFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVGGRP 263
+ ++ + P
Sbjct: 121 ERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDP 157
>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide
dehydrogenase, FCSD, flavin-binding subunit {Purple
phototrophic bacterium (Chromatium vinosum) [TaxId:
1049]}
Length = 186
Score = 28.2 bits (61), Expect = 0.94
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 118 LCVIGGGSGGISAAKEAASMNKKV 141
+ V+GGG+GG +AAK + +
Sbjct: 5 VVVVGGGTGGATAAKYIKLADPSI 28
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 132
Score = 27.2 bits (59), Expect = 1.2
Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 1/110 (0%)
Query: 120 VIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLL 179
+ G G G + AK + + L D + +N C K A +
Sbjct: 5 IAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIE 64
Query: 180 NEEATTSDNFGFHMKKSFTWKTLVDNVQKYIRNLNN-NYEKELEKNKIDY 228
+ + + + + + K I ++ Y+ E+ +D
Sbjct: 65 DADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDV 114
>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of
mitochondrial p450 systems {Cow (Bos taurus) [TaxId:
9913]}
Length = 230
Score = 28.0 bits (61), Expect = 1.3
Identities = 7/29 (24%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 119 CVIGGGSGGISAAKEAASMNK--KVALFD 145
CV+G G G A+ + V +++
Sbjct: 5 CVVGSGPAGFYTAQHLLKHHSRAHVDIYE 33
>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 239
Score = 27.7 bits (60), Expect = 1.7
Identities = 16/94 (17%), Positives = 22/94 (23%), Gaps = 17/94 (18%)
Query: 119 CVIGGGSGGISAAKEAASM-------NKKVALFDFVTPSQHGTVWGLGGTCVNVGCIP-K 170
++G G AA + V + + T WGL V G P
Sbjct: 6 AIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLE-----MLPTPWGL----VRSGVAPDH 56
Query: 171 KLFHRASLLNEEATTSDNFGFHMKKSFTWKTLVD 204
S E+ F F
Sbjct: 57 PKIKSISKQFEKTAEDPRFRFFGNVVVGEHVQPG 90
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate
ligase MurD {Escherichia coli [TaxId: 562]}
Length = 93
Score = 26.2 bits (57), Expect = 2.1
Identities = 9/60 (15%), Positives = 17/60 (28%), Gaps = 1/60 (1%)
Query: 120 VIGGGSGGISAAKEAASMNKKVALFDFVTPSQHGTVWGLGGTCVNVGCIPKKLFHRASLL 179
+IG G G+S + + D + G + + A L+
Sbjct: 10 IIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAV-ERHTGSLNDEWLMAADLI 68
>d1prtb1 b.40.2.1 (B:90-199) Pertussis toxin S2/S3 subunits,
C-terminal domain {Bordetella pertussis [TaxId: 520]}
Length = 110
Score = 26.1 bits (57), Expect = 2.5
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 9/41 (21%)
Query: 97 VYHDGRFYDYLDNNFQTYDYDLCVIGGGSGGISAAKEAASM 137
V + ++YDY D F+TY GIS +S+
Sbjct: 78 VSKEEQYYDYEDATFETYALT---------GISICNPGSSL 109
>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor
(AIF) {Human (Homo sapiens) [TaxId: 9606]}
Length = 213
Score = 26.6 bits (57), Expect = 3.5
Identities = 6/26 (23%), Positives = 12/26 (46%)
Query: 116 YDLCVIGGGSGGISAAKEAASMNKKV 141
+IGGG+ +AA+ + +
Sbjct: 5 VPFLLIGGGTAAFAAARSIRARDPGA 30
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase
{Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Length = 189
Score = 25.9 bits (56), Expect = 4.7
Identities = 6/28 (21%), Positives = 13/28 (46%)
Query: 119 CVIGGGSGGISAAKEAASMNKKVALFDF 146
V G G+ G + A + ++V ++
Sbjct: 11 VVFGSGAFGTALAMVLSKKCREVCVWHM 38
>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain
3 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 153
Score = 25.9 bits (56), Expect = 4.9
Identities = 20/153 (13%), Positives = 37/153 (24%), Gaps = 26/153 (16%)
Query: 123 GGSGGISAAKE---AASMNKKVALFDFVTPSQHGT----VWGLGGTCVNV-------GCI 168
G +K+ + + K + +P V G G T + G
Sbjct: 11 TQDQGFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGAR 70
Query: 169 PKKLFHRASLLNEEATTSDNFGFHMKKSFT-WKTLVDNVQKYIRNLNNNYEKELEKNKID 227
L R +N A + +K V + E+++
Sbjct: 71 RVFLVFRKGFVNIRAVPEEVELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDE-- 128
Query: 228 YFNAKAVFVDKHRVKFAGEERTVSAQNFIIAVG 260
+ + + A I A G
Sbjct: 129 ---------TGKWNEDEDQIVHLKADVVISAFG 152
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 309
Score = 25.5 bits (55), Expect = 8.0
Identities = 8/58 (13%), Positives = 14/58 (24%)
Query: 189 FGFHMKKSFTWKTLVDNVQKYIRNLNNNYEKELEKNKIDYFNAKAVFVDKHRVKFAGE 246
+ T VD +K I N + + + R + G
Sbjct: 146 ASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGS 203
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.412
Gapped
Lambda K H
0.267 0.0600 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,145,124
Number of extensions: 54393
Number of successful extensions: 251
Number of sequences better than 10.0: 1
Number of HSP's gapped: 235
Number of HSP's successfully gapped: 94
Length of query: 296
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 211
Effective length of database: 1,240,546
Effective search space: 261755206
Effective search space used: 261755206
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.5 bits)