BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7666
(350 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50336|PPOX_HUMAN Protoporphyrinogen oxidase OS=Homo sapiens GN=PPOX PE=1 SV=1
Length = 477
Score = 191 bits (485), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 137/224 (61%), Gaps = 7/224 (3%)
Query: 97 ITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITS 156
+ L+ESS RLGGW+RSV+ P G IFE GPR IRP G LGA TL LV +LGL +V+P+
Sbjct: 30 VVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRG 89
Query: 157 SHPTAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFSILHDLTTKTVPKSDESIYDF 216
HP AQNR +YV LH LP+ L + PFSKPL ++ L +LT + DE+++ F
Sbjct: 90 DHPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSF 149
Query: 217 VSRRFGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEM-MSK 275
RR G EVA A+ S+ G+ AG+++++S+ LF+ EQ H ++ G + +
Sbjct: 150 AQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTP 209
Query: 276 RPDLSGYEESELYRRSRIEKWSVWSVEGGLQTIVNTLGEHLSNK 319
+PD S L R++ E+WS WS+ GGL+ + L HL+++
Sbjct: 210 QPD------SALIRQALAERWSQWSLRGGLEMLPQALETHLTSR 247
>sp|P51175|PPOX_MOUSE Protoporphyrinogen oxidase OS=Mus musculus GN=Ppox PE=2 SV=1
Length = 477
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 136/224 (60%), Gaps = 7/224 (3%)
Query: 97 ITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITS 156
+ L+E S RLGGW+RS++ +G IFE GPR IRP G LGA TL LV +LGL +V+P+
Sbjct: 30 VILVEGSKRLGGWIRSIRGSDGAIFELGPRGIRPAGALGARTLLLVSELGLESEVLPVRG 89
Query: 157 SHPTAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFSILHDLTTKTVPKSDESIYDF 216
HP AQNR +YV LH LPS L + PFSKPL ++ L +L + DE+++ F
Sbjct: 90 DHPAAQNRFLYVGGTLHPLPSGLRGLLRPSPPFSKPLFWAGLRELLKPRGKEPDETVHSF 149
Query: 217 VSRRFGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEM-MSK 275
RR G EVA A+ S+ G+ AG+++++S+ LF+ EQ H ++ G + S
Sbjct: 150 AQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGQSP 209
Query: 276 RPDLSGYEESELYRRSRIEKWSVWSVEGGLQTIVNTLGEHLSNK 319
+PD S L R++R E+WS WS+ GGL+ + L HL++K
Sbjct: 210 QPD------SSLIRQARAERWSQWSLRGGLEVLPQALHNHLASK 247
>sp|Q60HD5|PPOX_MACFA Protoporphyrinogen oxidase OS=Macaca fascicularis GN=PPOX PE=2 SV=1
Length = 477
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 136/224 (60%), Gaps = 7/224 (3%)
Query: 97 ITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITS 156
+ L+E S RLGGW+RSV+ P G IFE GPR IRP G LGA TL LV +LGL +V+P+
Sbjct: 30 VVLVEGSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRG 89
Query: 157 SHPTAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFSILHDLTTKTVPKSDESIYDF 216
HP AQNR +YV LH LP+ L + PFSKPL ++ L +LT + DE+++ F
Sbjct: 90 DHPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSF 149
Query: 217 VSRRFGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEM-MSK 275
RR G EVA A+ S+ G+ AG+++++S+ LF+ EQ H V+ G + +
Sbjct: 150 AQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSVLLGLLLGAGRTP 209
Query: 276 RPDLSGYEESELYRRSRIEKWSVWSVEGGLQTIVNTLGEHLSNK 319
+PD S L R++ E+WS WS+ GGL+ + L HL+++
Sbjct: 210 QPD------SALIRQALAERWSQWSLRGGLEMLPQALETHLTSR 247
>sp|Q10062|PPOX_SCHPO Protoporphyrinogen oxidase OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hem14 PE=3 SV=1
Length = 490
Score = 121 bits (303), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 141/248 (56%), Gaps = 22/248 (8%)
Query: 97 ITLLESSSRLGGWVRSVQ-----SPEG-LIFEKGPRTIRPKGRLGANTLKLVEDLGLADQ 150
I L E RLGGW++SV+ SP G ++FE+GPRT+RP G G L L+ LG+ D+
Sbjct: 28 IDLYEKGPRLGGWLQSVKIPCADSPTGTVLFEQGPRTLRPAGVAGLANLDLISKLGIEDK 87
Query: 151 VIPITSSHPTAQNRLIYVNKKLHKLPSNFFSLFKT-HSPFSKPLIFSILHDLTTKTVPKS 209
++ I+S+ P+A+NR IY +L+++PS+ K+ P +P+ +++ + K+ S
Sbjct: 88 LLRISSNSPSAKNRYIYYPDRLNEIPSSILGSIKSIMQPALRPMPLAMMLEPFRKSKRDS 147
Query: 210 -DESIYDFVSRRFGSEVADYAVSSMICGICAGDAKKISVNFLM-AKLFELEQLHGGVIKG 267
DES+ F+ RRFG V D +S+MI GI AGD +S++ M L ++E+ +G + G
Sbjct: 148 TDESVGSFMRRRFGKNVTDRVMSAMINGIYAGDLNDLSMHSSMFGFLAKIEKKYGNITLG 207
Query: 268 AIKEMMS-----------KRPDLSGYEESELYRRSRIEKWSVWSVEGGLQTIVNTLGEHL 316
I+ +++ K L+ + +EL + ++ S+++ + G++TI ++ + L
Sbjct: 208 LIRALLAREILSPAEKALKAALLAEPKTAEL--SNSMKSTSMFAFKEGIETITLSIADEL 265
Query: 317 SNKVEVKM 324
VK+
Sbjct: 266 KKMPNVKI 273
>sp|Q94IG7|PPOCM_SPIOL Protoporphyrinogen oxidase, chloroplastic/mitochondrial OS=Spinacia
oleracea GN=POX2 PE=1 SV=1
Length = 531
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 122/249 (48%), Gaps = 21/249 (8%)
Query: 97 ITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITS 156
+TL E+ SR GG +++V +GLI+++G T+ L +DLG+ +++
Sbjct: 68 VTLFEADSRAGGKLKTVVK-DGLIWDEGANTMTESDE---EVTSLFDDLGIREKL----- 118
Query: 157 SHPTAQNRLIYVNKKLHKL-PSNFFSLFKTHSPFSKPLIFSIL-------HDLTTKTVPK 208
P +QN+ L L PSN +L K++ +K + +L H+ +
Sbjct: 119 QLPISQNKRYIARDGLPVLLPSNPVALLKSNILSAKSKLQIMLEPFLWKKHNGAKVSDEN 178
Query: 209 SDESIYDFVSRRFGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGA 268
+ ES+ +F R FG E DY + + G GD + +S+ +L+ +E G VI G
Sbjct: 179 AQESVAEFFERHFGKEFVDYLIDPFVAGTSGGDPQSLSMRHAFPELWNIENRFGSVISGF 238
Query: 269 IKEMMSKRPDLSGYEESELYRRSRIEKWSVWSVEGGLQTIVNTLGEHLSNKVEVKMDTTC 328
I+ +S + + G ++S ++ R+ +S +GG+QT+V+T+ + E+K+ +
Sbjct: 239 IQSKLSSKKEKGGEKQSS-NKKPRVR--GSFSFQGGMQTLVDTICKEFGED-ELKLQSEV 294
Query: 329 TNLEFLEKG 337
+L + G
Sbjct: 295 LSLSYSHNG 303
>sp|O24164|PPOM_TOBAC Protoporphyrinogen oxidase, mitochondrial OS=Nicotiana tabacum
GN=PPXII PE=1 SV=1
Length = 504
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 17/226 (7%)
Query: 97 ITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITS 156
+T+ E+ + GG +RSV S +GLI+++G T+ + L++ LGL ++
Sbjct: 39 VTVFEAEGKAGGKLRSV-SQDGLIWDEGANTMTESE---GDVTFLIDSLGLREK-----Q 89
Query: 157 SHPTAQN-RLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFSILHDLTTKT-----VPKSD 210
P +QN R I N LPSN L K++ + + +L + K V S
Sbjct: 90 QFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQMLLEPILWKNKKLSQVSDSH 149
Query: 211 ESIYDFVSRRFGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIK 270
ES+ F R FG EV DY + + G C GD +S++ +L+ LE+ G VI GAI+
Sbjct: 150 ESVSGFFQRHFGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIR 209
Query: 271 EMMSKRPDLSGYEESELYRRSRIEKWSVWSVEGGLQTIVNTLGEHL 316
+S + + + R + +S GG+QT+ + + + L
Sbjct: 210 SKLSPKNEKKQGPPKTSANKKR--QRGSFSFLGGMQTLTDAICKDL 253
>sp|P32397|PPOX_BACSU Protoporphyrinogen oxidase OS=Bacillus subtilis (strain 168)
GN=hemY PE=1 SV=1
Length = 470
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 117/228 (51%), Gaps = 27/228 (11%)
Query: 97 ITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITS 156
+TL+E+S R+GG +++V+ +G I E+GP + + + + +LV+DLGL ++
Sbjct: 37 LTLVEASPRVGGKIQTVKK-DGYIIERGPDSFLERKK---SAPQLVKDLGLEHLLV---- 88
Query: 157 SHPTAQNRLIYVNKKLHKLPSNFFSLFKTH-SPFSKPLIFSI-------LHDLTTKTVPK 208
++ T Q+ ++ VN+ LH +P T +PF +FS+ + + + K
Sbjct: 89 NNATGQSYVL-VNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFILPASKTK 147
Query: 209 SDESIYDFVSRRFGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGA 268
D+S+ +F RR G EV + + ++ GI AGD K+S+ + ++ EQ H +I G
Sbjct: 148 DDQSLGEFFRRRVGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILG- 206
Query: 269 IKEMMSKRPDLSGYEESELYRRSRIEKWSVWSVEGGLQTIVNTLGEHL 316
M RP SG ++ ++ + + S GLQT+V + + L
Sbjct: 207 ---MKKTRPQGSG-QQLTAKKQGQFQTLST-----GLQTLVEEIEKQL 245
>sp|Q54DT8|PPOX_DICDI Protoporphyrinogen oxidase OS=Dictyostelium discoideum GN=ppox PE=3
SV=1
Length = 532
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 32/241 (13%)
Query: 97 ITLLESSSRLGGWV--RSVQS---PEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQV 151
I + E S+++GG + R +Q E +I E+GPR++R GR G NTL+ ++ LG+++ +
Sbjct: 38 INIFEKSNKVGGNIQTRIIQGKNKDEKIIVEEGPRSLRALGR-GLNTLEFIKRLGISNDI 96
Query: 152 IPITSSHPTAQNRLIYVNKKLHKLP-SNFFSLFKTHSPFSKPLIFSILHDLTTKT----- 205
I S + + + ++ K ++P ++ F + K F ++ SIL + K
Sbjct: 97 I---FSSANSNGKFVLLDGKPKEIPMTSLFDIIKF--SFKHSIVSSILKEPFKKVPSQVK 151
Query: 206 --VPKSDESIYDFVSRRFGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGG 263
P DES++DF SRR G + + I GI GD +S+ + LE G
Sbjct: 152 EMDPNWDESVHDFFSRRLGKTMTKTFIEPTILGIYGGDYTNLSIKSTFKRAALLEPFGGL 211
Query: 264 VIKGAIKEMMSKRPDL-----------SGYEESELYRRSRIEKWSVWSV-EGGLQTIVNT 311
++ K K+ +L S E +EL+ + +K +V+S E GL ++
Sbjct: 212 ILGSLFKSKKQKQFELDLDKNEKRLLPSKNELTELFDKD-TDKTNVFSFKENGLSRMIQK 270
Query: 312 L 312
L
Sbjct: 271 L 271
>sp|P55826|PPOC_ARATH Protoporphyrinogen oxidase, chloroplastic OS=Arabidopsis thaliana
GN=PPOX PE=2 SV=1
Length = 537
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 24/263 (9%)
Query: 81 LLVIRILCTVLRISTP-ITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTL 139
L + + L T + P + + E+ R+GG + + + G ++E+GP + +P + L
Sbjct: 69 LCIAQALATKHPDAAPNLIVTEAKDRVGGNIITREE-NGFLWEEGPNSFQPSDPM----L 123
Query: 140 KLVEDLGLADQVIPITSSHPTAQNRLIYVNKKLHKLPSN-----FFSLFKTHSPFSKPLI 194
+V D GL D ++ PTA R + N KL +PS FF L
Sbjct: 124 TMVVDSGLKDDLV---LGDPTAP-RFVLWNGKLRPVPSKLTDLPFFDLMSIGGKIRAG-- 177
Query: 195 FSILHDLTTKTVPKSDESIYDFVSRRFGSEVADYAVSSMICGICAGDAKKISVNFLMAKL 254
F L + P +ES+ +FV R G EV + + G+ AGD K+S+ K+
Sbjct: 178 FGALG--IRPSPPGREESVEEFVRRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKV 235
Query: 255 FELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSVWSVEGGLQTIVNTLGE 314
++LEQ G +I G K + ++ + L + + +V S GL+ + +
Sbjct: 236 WKLEQNGGSIIGGTFKAIQERKNAPKAERDPRL---PKPQGQTVGSFRKGLRMLPEAISA 292
Query: 315 HLSNKVEVKMDTTCTNLEFLEKG 337
L +K VK+ + + LE G
Sbjct: 293 RLGSK--VKLSWKLSGITKLESG 313
>sp|P56601|PPOX_MYXXA Protoporphyrinogen oxidase OS=Myxococcus xanthus GN=hemY PE=1 SV=1
Length = 471
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 105/243 (43%), Gaps = 41/243 (16%)
Query: 94 STPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTI---RPKGRLGANTLKLVEDLGLADQ 150
T LLESS+RLGG V + G + E+GP + P R A L L + AD
Sbjct: 32 GTDAVLLESSARLGGAV-GTHALAGYLVEQGPNSFLDREPATRALAAALNLEGRIRAAD- 89
Query: 151 VIPITSSHPTAQNRLIYVNKKLHKLPSNFFSLFKTHS-PFSKPLIFSILHDLTTKTVPKS 209
P A+ R +Y +L +P++ + + P L + +L ++ P+
Sbjct: 90 --------PAAKRRYVYTRGRLRSVPASPPAFLASDILPLGARL--RVAGELFSRRAPEG 139
Query: 210 -DESIYDFVSRRFGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGA 268
DES+ F R G + ++ GI AGD +++SV L ++E+ H +I GA
Sbjct: 140 VDESLAAFGRRHLGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGA 199
Query: 269 IKEMMSKR---------PDLSGYEESELYRRSRIEKWSVWSVEGGLQTIVNTLGEHLSNK 319
I+ ++R P LSG ++ + +GGLQ +++ L L +
Sbjct: 200 IRAQKAQRQAALPAGTAPKLSG---------------ALSTFDGGLQVLIDALAASLGDA 244
Query: 320 VEV 322
V
Sbjct: 245 AHV 247
>sp|Q9AR38|PPOC_ORYSJ Protoporphyrinogen oxidase, chloroplastic OS=Oryza sativa subsp.
japonica GN=PPOX1 PE=2 SV=1
Length = 536
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 84 IRILCTVLRIST-----PITLLESSSRLGGWVRSVQ-SPEGLIFEKGPRTIRPKGRLGAN 137
I LCT ++T + + E+ +R GG + + + + EG ++E+GP + +P +
Sbjct: 65 ISGLCTAQALATKHGVGDVLVTEARARPGGNITTAERAGEGYLWEEGPNSFQPSDPV--- 121
Query: 138 TLKLVEDLGLADQVIPITSSHPTAQNRLIYVNKKLHKLPSN-----FFSLFKTHSPFSKP 192
L + D GL D ++ + P R + KL +PS FF L
Sbjct: 122 -LTMAVDSGLKDDLVFGDPNAP----RFVLWEGKLRPVPSKPGDLPFFDLMSIPGKLR-- 174
Query: 193 LIFSILHDLTTKTVPKS-DESIYDFVSRRFGSEVADYAVSSMICGICAGDAKKISVNFLM 251
+ L L + P +ES+ DFV R G+EV + + G+ AGD K+S+
Sbjct: 175 ---AGLGALGVRAPPPGREESVEDFVRRNLGAEVFERLIEPFCSGVYAGDPSKLSMKAAF 231
Query: 252 AKLFELEQLHGGVIKGAIKEMMSK 275
K++ LE G +I G IK + +
Sbjct: 232 GKVWRLEDTGGSIIGGTIKTIQER 255
>sp|P40012|PPOX_YEAST Protoporphyrinogen oxidase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HEM14 PE=1 SV=1
Length = 539
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 32/262 (12%)
Query: 91 LRISTPITLLESSSRLGGWVRSVQ----SPEGLIFEKGPRTIRPKGRLGANTLKLVEDLG 146
LR ITL ES +R GGW+ S S ++ EKGPRT+R + ++DLG
Sbjct: 33 LRPDVEITLFESQNRTGGWIYSCNTRDMSGNPIMLEKGPRTLRGVSDGTVLIMDTLKDLG 92
Query: 147 LADQVIPITSSHPTAQNRLIYVNKKLHKLPSNFFSLFK-THSPFSKPLIFSILHDLTTKT 205
+ I + L+ + KL ++P++ + K +P K LI ++ + K
Sbjct: 93 KEAVIQSIDKGCIADKKFLLDPSDKLVQVPNSISTTVKFLLNPLGKGLITGMMGEWFRKK 152
Query: 206 VPK--SDESIYDFVSRRFGSE-VADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHG 262
P DES+ RRFG+ +++ +S+++ GI D +S K++ E HG
Sbjct: 153 SPHPGQDESVESICDRRFGNNYISNNMISALLRGIYGDDVSLLSAKRTFKKIYYNELKHG 212
Query: 263 GVIKGAIKEMMSKRPD-------------LSGYEESELYRRSR-------IEKWSVWSVE 302
+ I M K L+ Y + RS+ ++K+ + +
Sbjct: 213 SNTQAMIDNMRGKSRSKKTENLHQSLTGCLNDYSNAFGKDRSKLLDLSNTLKKYPMLGLA 272
Query: 303 GGLQT----IVNTLGEHLSNKV 320
GGL+T + N L E + K+
Sbjct: 273 GGLETFPKIVRNALNEFKNVKI 294
>sp|O24163|PPOC_TOBAC Protoporphyrinogen oxidase, chloroplastic OS=Nicotiana tabacum
GN=PPXI PE=2 SV=1
Length = 548
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 24/257 (9%)
Query: 87 LCTVLRISTP-ITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDL 145
+ V+ + P + + E+ R GG + +V+ +G ++E+GP + +P + L + D
Sbjct: 86 IAQVMSANYPNLMVTEARDRAGGNITTVER-DGYLWEEGPNSFQPSDPM----LTMAVDC 140
Query: 146 GLADQVIPITSSHPTAQNRLIYVNKKLHKLPSN-----FFSLFKTHSPFSKPLIFSILHD 200
GL D ++ + P R + KL +PS FF L P F +
Sbjct: 141 GLKDDLVLGDPNAP----RFVLWKGKLRPVPSKLTDLAFFDLMSI--PGKLRAGFGAIG- 193
Query: 201 LTTKTVPKSDESIYDFVSRRFGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQL 260
+ P +ES+ FV R G EV + + G+ AGD K+S+ K+++LE+
Sbjct: 194 -LRPSPPGHEESVEQFVRRNLGGEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEET 252
Query: 261 HGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSVWSVEGGLQTIVNTLGEHLSNKV 320
G +I G K + + + L + + +V S GL+ + + + L +K
Sbjct: 253 GGSIIGGTFKAIKERSSTPKAPRDPRL---PKPKGQTVGSFRKGLRMLPDAISARLGSK- 308
Query: 321 EVKMDTTCTNLEFLEKG 337
+K+ +++ EKG
Sbjct: 309 -LKLSWKLSSITKSEKG 324
>sp|O32434|PPOX_PROFF Protoporphyrinogen oxidase OS=Propionibacterium freudenreichii
subsp. freudenreichii GN=hemY PE=3 SV=1
Length = 527
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 24/177 (13%)
Query: 97 ITLLESSSRLGGWVRSVQSPEGLIFEKGPRTI---RPKGRLGANTLKLVEDLGLADQVIP 153
++++ES GG V + + +G + E+GP + RP LKL+E+LGL+DQVI
Sbjct: 52 VSVVESDDHFGGKVVTDRR-DGFLVEQGPDSFVAYRPA------ALKLIEELGLSDQVI- 103
Query: 154 ITSSHPTAQNRLIYVNK-KLHKLPSNFFSLFKTHS-PFSKPLIFSI-------LHDLTTK 204
P R+ +++ KL +P+ + T PF + S L + +
Sbjct: 104 ----APGGGRRVSLLSRGKLRPMPAGMGMVLPTRMWPFVTTTVLSWPDKIRAGLDLVIPR 159
Query: 205 TVPKSDESIYDFVSRRFGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLH 261
+P D +I F+ +R G + M+ GI ++S++ ++ L + E+ H
Sbjct: 160 RLPDHDVAIGAFLRQRLGDGIVRRFADPMVGGIYGAGIDELSLDAVLPSLRDNERDH 216
>sp|P0A5A7|PPOX_MYCTU Protoporphyrinogen oxidase OS=Mycobacterium tuberculosis GN=hemY
PE=3 SV=1
Length = 452
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 30/166 (18%)
Query: 97 ITLLESSSRLGGWVRSVQSPEGLIFEKGPRTI---RPKGRLGANTLKLVEDLGLADQVIP 153
ITL E + RLGG +R+ + G + G RP+ L+ +LGL+D+ +
Sbjct: 32 ITLFEPADRLGGVLRT-EHIGGQPMDLGAEAFVLRRPE------MPALLAELGLSDRQLA 84
Query: 154 ITSSHPTAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFSILHDLTTKTVPK----- 208
T + P LIY ++LH LP P S + ++ D T +
Sbjct: 85 STGARP-----LIYSQQRLHPLPPQTV----VGIPSSAGSMAGLVDDATLARIDAEAARP 135
Query: 209 ------SDESIYDFVSRRFGSEVADYAVSSMICGICAGDAKKISVN 248
SD ++ D V+ RFG +V +V ++ G+ AG A I +
Sbjct: 136 FTWQVGSDPAVADLVADRFGDQVVARSVDPLLSGVYAGSAATIGLR 181
>sp|P0A5A8|PPOX_MYCBO Protoporphyrinogen oxidase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=hemY PE=3 SV=1
Length = 452
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 30/166 (18%)
Query: 97 ITLLESSSRLGGWVRSVQSPEGLIFEKGPRTI---RPKGRLGANTLKLVEDLGLADQVIP 153
ITL E + RLGG +R+ + G + G RP+ L+ +LGL+D+ +
Sbjct: 32 ITLFEPADRLGGVLRT-EHIGGQPMDLGAEAFVLRRPE------MPALLAELGLSDRQLA 84
Query: 154 ITSSHPTAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFSILHDLTTKTVPK----- 208
T + P LIY ++LH LP P S + ++ D T +
Sbjct: 85 STGARP-----LIYSQQRLHPLPPQTV----VGIPSSAGSMAGLVDDATLARIDAEAARP 135
Query: 209 ------SDESIYDFVSRRFGSEVADYAVSSMICGICAGDAKKISVN 248
SD ++ D V+ RFG +V +V ++ G+ AG A I +
Sbjct: 136 FTWQVGSDPAVADLVADRFGDQVVARSVDPLLSGVYAGSAATIGLR 181
>sp|O35379|MRP1_MOUSE Multidrug resistance-associated protein 1 OS=Mus musculus GN=Abcc1
PE=1 SV=1
Length = 1528
Score = 32.7 bits (73), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 176 PSNFFSLFKTHSP-FSKPLIFSILHDLTTKTVPKSDESIYDFVSRRFGSEVADYAVSSMI 234
PS F L+KT P F ++ LHDL PK E I +FV+ R + Y ++++
Sbjct: 312 PSLFKVLYKTFGPYFLMSFLYKALHDLMMFAGPKILELIINFVNDREAPDWQGYFYTALL 371
>sp|Q9BYW2|SETD2_HUMAN Histone-lysine N-methyltransferase SETD2 OS=Homo sapiens GN=SETD2
PE=1 SV=3
Length = 2564
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 32/80 (40%)
Query: 201 LTTKTVPKSDESIYDFVSRRFGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQL 260
TTK VP E +D+ +R+G E S C G ++S+ K+ +
Sbjct: 1651 FTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRGYLGGENRVSIRAAGGKMKKERSR 1710
Query: 261 HGGVIKGAIKEMMSKRPDLS 280
+ G ++ +M LS
Sbjct: 1711 KKDSVDGELEALMENGEGLS 1730
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,136,441
Number of Sequences: 539616
Number of extensions: 4808528
Number of successful extensions: 12173
Number of sequences better than 100.0: 20
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 12146
Number of HSP's gapped (non-prelim): 21
length of query: 350
length of database: 191,569,459
effective HSP length: 118
effective length of query: 232
effective length of database: 127,894,771
effective search space: 29671586872
effective search space used: 29671586872
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)