Query psy7666
Match_columns 350
No_of_seqs 157 out of 1366
Neff 8.1
Searched_HMMs 29240
Date Sat Aug 17 00:18:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7666.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7666hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nks_A Protoporphyrinogen oxid 100.0 4.1E-28 1.4E-32 240.1 18.6 258 83-345 11-275 (477)
2 2ivd_A PPO, PPOX, protoporphyr 99.9 1E-25 3.5E-30 223.1 23.5 247 83-349 25-282 (478)
3 1sez_A Protoporphyrinogen oxid 99.9 2.7E-25 9.3E-30 221.6 21.6 247 83-343 22-285 (504)
4 3lov_A Protoporphyrinogen oxid 99.9 6.3E-24 2.2E-28 210.2 23.8 247 82-348 12-276 (475)
5 3i6d_A Protoporphyrinogen oxid 99.9 1.4E-24 4.9E-29 213.6 15.8 247 83-349 14-277 (470)
6 4gde_A UDP-galactopyranose mut 99.9 1.2E-23 4.1E-28 209.6 16.6 236 82-349 18-264 (513)
7 3ka7_A Oxidoreductase; structu 99.9 1.1E-20 3.7E-25 183.9 23.5 216 82-349 8-240 (425)
8 2vvm_A Monoamine oxidase N; FA 99.9 5E-21 1.7E-25 190.4 20.5 226 84-349 49-300 (495)
9 1s3e_A Amine oxidase [flavin-c 99.9 2.1E-21 7E-26 194.7 16.6 228 82-349 12-256 (520)
10 3nrn_A Uncharacterized protein 99.9 1.7E-20 5.7E-25 182.9 21.6 216 82-349 8-231 (421)
11 4dgk_A Phytoene dehydrogenase; 99.8 2.1E-20 7E-25 186.0 18.1 220 83-350 10-267 (501)
12 4dsg_A UDP-galactopyranose mut 99.8 1.3E-19 4.3E-24 180.5 15.4 232 82-349 17-258 (484)
13 1v0j_A UDP-galactopyranose mut 99.8 1.1E-20 3.7E-25 183.7 6.4 206 82-333 15-230 (399)
14 2yg5_A Putrescine oxidase; oxi 99.8 3.9E-19 1.3E-23 174.6 16.7 220 83-349 14-256 (453)
15 2bi7_A UDP-galactopyranose mut 99.8 5.8E-20 2E-24 177.8 9.7 213 83-340 12-232 (384)
16 1i8t_A UDP-galactopyranose mut 99.8 1.5E-19 5.2E-24 173.7 9.7 204 82-332 9-217 (367)
17 3hdq_A UDP-galactopyranose mut 99.8 4E-19 1.4E-23 172.2 11.8 202 83-332 38-247 (397)
18 2b9w_A Putative aminooxidase; 99.8 1.3E-18 4.4E-23 169.5 13.8 215 83-346 15-244 (424)
19 1d5t_A Guanine nucleotide diss 99.7 2.2E-16 7.4E-21 154.9 19.8 228 83-349 15-278 (433)
20 1rsg_A FMS1 protein; FAD bindi 99.7 5.4E-17 1.9E-21 162.5 15.3 210 84-349 18-245 (516)
21 3p1w_A Rabgdi protein; GDI RAB 99.7 5.4E-16 1.8E-20 153.3 20.6 226 84-349 30-302 (475)
22 2bcg_G Secretory pathway GDP d 99.7 9.9E-16 3.4E-20 151.0 20.0 225 83-349 20-288 (453)
23 3k7m_X 6-hydroxy-L-nicotine ox 99.7 5.1E-16 1.7E-20 151.2 16.8 216 82-349 9-247 (431)
24 2e1m_A L-glutamate oxidase; L- 99.6 9.6E-16 3.3E-20 147.4 12.9 70 79-151 45-131 (376)
25 2jae_A L-amino acid oxidase; o 99.6 3.1E-17 1.1E-21 162.7 1.8 221 79-345 12-277 (489)
26 1b37_A Protein (polyamine oxid 99.6 4E-15 1.4E-19 147.1 13.2 223 82-349 12-258 (472)
27 2iid_A L-amino-acid oxidase; f 99.6 1.9E-14 6.7E-19 142.9 15.0 215 83-347 42-280 (498)
28 4gut_A Lysine-specific histone 99.5 2.1E-13 7.2E-18 142.5 12.5 229 79-349 337-573 (776)
29 2xag_A Lysine-specific histone 99.4 1.4E-12 4.9E-17 137.2 14.9 68 79-149 279-353 (852)
30 2z3y_A Lysine-specific histone 99.4 2.5E-12 8.5E-17 132.6 14.8 68 79-149 108-182 (662)
31 3ayj_A Pro-enzyme of L-phenyla 99.4 3.2E-12 1.1E-16 131.7 13.6 68 79-149 57-163 (721)
32 1vg0_A RAB proteins geranylger 99.3 4.4E-11 1.5E-15 121.8 19.9 191 118-350 223-426 (650)
33 3kkj_A Amine oxidase, flavin-c 98.5 9.3E-08 3.2E-12 84.1 5.7 58 83-144 11-71 (336)
34 3qj4_A Renalase; FAD/NAD(P)-bi 98.5 3.1E-07 1.1E-11 86.3 8.6 49 298-348 104-152 (342)
35 1yvv_A Amine oxidase, flavin-c 97.6 5E-05 1.7E-09 70.4 5.8 61 82-146 10-73 (336)
36 3fpz_A Thiazole biosynthetic e 95.6 0.0048 1.7E-07 57.1 2.6 33 79-111 66-107 (326)
37 2vdc_G Glutamate synthase [NAD 94.6 0.015 5.2E-07 56.7 3.0 32 79-110 123-161 (456)
38 3oz2_A Digeranylgeranylglycero 93.8 0.03 1E-06 52.2 2.9 27 82-108 12-41 (397)
39 3nyc_A D-arginine dehydrogenas 93.6 0.033 1.1E-06 51.9 2.8 48 298-345 143-194 (381)
40 3k30_A Histamine dehydrogenase 93.5 0.028 9.5E-07 57.7 2.4 34 79-112 392-432 (690)
41 3lzw_A Ferredoxin--NADP reduct 93.4 0.029 9.9E-07 51.1 2.2 34 79-112 8-48 (332)
42 4gcm_A TRXR, thioredoxin reduc 93.4 0.039 1.3E-06 50.2 3.0 32 80-112 8-46 (312)
43 3itj_A Thioredoxin reductase 1 93.3 0.031 1.1E-06 51.1 2.2 34 79-112 23-67 (338)
44 1o94_A Tmadh, trimethylamine d 93.1 0.045 1.5E-06 56.6 3.2 34 79-112 390-430 (729)
45 3urh_A Dihydrolipoyl dehydroge 92.7 0.054 1.8E-06 53.0 3.0 37 307-343 240-277 (491)
46 3dme_A Conserved exported prot 92.7 0.056 1.9E-06 49.9 3.0 42 305-346 149-192 (369)
47 2gv8_A Monooxygenase; FMO, FAD 92.7 0.062 2.1E-06 51.9 3.4 34 79-112 7-49 (447)
48 3pvc_A TRNA 5-methylaminomethy 92.6 0.075 2.6E-06 54.5 4.0 43 306-348 412-456 (689)
49 3r9u_A Thioredoxin reductase; 92.5 0.046 1.6E-06 49.4 2.1 33 79-112 5-45 (315)
50 2zbw_A Thioredoxin reductase; 92.5 0.049 1.7E-06 49.9 2.3 34 79-112 6-46 (335)
51 3rp8_A Flavoprotein monooxygen 92.4 0.057 1.9E-06 51.2 2.7 29 79-107 24-59 (407)
52 3v76_A Flavoprotein; structura 92.3 0.051 1.7E-06 52.3 2.2 32 79-110 28-66 (417)
53 3l8k_A Dihydrolipoyl dehydroge 92.2 0.057 1.9E-06 52.5 2.4 39 306-346 214-255 (466)
54 4ap3_A Steroid monooxygenase; 92.0 0.042 1.4E-06 54.9 1.2 47 79-126 22-75 (549)
55 3ab1_A Ferredoxin--NADP reduct 91.8 0.063 2.2E-06 49.9 2.2 34 79-112 15-55 (360)
56 1mo9_A ORF3; nucleotide bindin 91.8 0.093 3.2E-06 51.9 3.5 42 307-348 256-303 (523)
57 4a9w_A Monooxygenase; baeyer-v 91.8 0.082 2.8E-06 48.4 2.9 29 84-112 13-44 (357)
58 2xve_A Flavin-containing monoo 91.8 0.084 2.9E-06 51.4 3.1 34 79-112 3-49 (464)
59 4at0_A 3-ketosteroid-delta4-5a 91.7 0.082 2.8E-06 52.1 3.0 35 303-337 199-235 (510)
60 4hb9_A Similarities with proba 91.7 0.078 2.7E-06 49.7 2.6 28 79-106 2-36 (412)
61 3ps9_A TRNA 5-methylaminomethy 91.6 0.11 3.8E-06 53.0 3.9 44 306-349 417-461 (676)
62 3o0h_A Glutathione reductase; 91.6 0.072 2.4E-06 52.1 2.4 42 308-349 234-276 (484)
63 3dje_A Fructosyl amine: oxygen 91.5 0.12 4.1E-06 49.4 3.8 45 305-349 160-209 (438)
64 1ryi_A Glycine oxidase; flavop 91.5 0.097 3.3E-06 48.8 3.1 40 306-345 164-204 (382)
65 2xdo_A TETX2 protein; tetracyc 91.4 0.11 3.9E-06 49.0 3.5 31 79-109 27-64 (398)
66 1y0p_A Fumarate reductase flav 91.3 0.093 3.2E-06 52.5 2.9 27 84-110 136-165 (571)
67 3f8d_A Thioredoxin reductase ( 91.3 0.095 3.2E-06 47.3 2.7 32 79-112 16-54 (323)
68 3dje_A Fructosyl amine: oxygen 91.2 0.49 1.7E-05 45.0 7.8 30 82-111 14-47 (438)
69 4dna_A Probable glutathione re 91.2 0.087 3E-06 51.1 2.5 40 307-346 212-254 (463)
70 2vou_A 2,6-dihydroxypyridine h 91.1 0.23 7.7E-06 46.9 5.3 48 83-149 14-65 (397)
71 4a5l_A Thioredoxin reductase; 91.0 0.099 3.4E-06 47.3 2.5 33 80-112 6-49 (314)
72 2qae_A Lipoamide, dihydrolipoy 90.9 0.094 3.2E-06 50.9 2.5 38 308-345 217-258 (468)
73 1ps9_A 2,4-dienoyl-COA reducta 90.8 0.14 4.7E-06 52.3 3.7 33 79-111 374-413 (671)
74 1yvv_A Amine oxidase, flavin-c 90.8 0.31 1.1E-05 44.3 5.8 47 298-348 102-148 (336)
75 2gqf_A Hypothetical protein HI 90.7 0.094 3.2E-06 50.1 2.2 25 84-108 14-41 (401)
76 2q7v_A Thioredoxin reductase; 90.6 0.12 4.2E-06 47.0 2.9 33 79-112 9-48 (325)
77 1rp0_A ARA6, thiazole biosynth 90.6 0.14 4.6E-06 46.3 3.1 27 84-110 49-79 (284)
78 1w4x_A Phenylacetone monooxyge 90.5 0.13 4.6E-06 51.0 3.2 34 79-112 17-57 (542)
79 3cty_A Thioredoxin reductase; 90.5 0.13 4.5E-06 46.7 2.9 32 80-112 18-56 (319)
80 1gte_A Dihydropyrimidine dehyd 90.5 0.12 4.3E-06 55.4 3.1 32 79-110 188-227 (1025)
81 3cgv_A Geranylgeranyl reductas 90.4 0.13 4.6E-06 48.0 2.9 27 82-108 12-41 (397)
82 3ps9_A TRNA 5-methylaminomethy 90.1 0.44 1.5E-05 48.5 6.8 32 79-110 273-311 (676)
83 1zmd_A Dihydrolipoyl dehydroge 90.1 0.12 4.2E-06 50.1 2.4 35 308-342 222-258 (474)
84 1qo8_A Flavocytochrome C3 fuma 90.0 0.11 3.8E-06 51.9 2.1 30 80-109 123-159 (566)
85 3gwf_A Cyclohexanone monooxyge 90.0 0.1 3.6E-06 51.9 1.9 44 80-124 10-61 (540)
86 1dxl_A Dihydrolipoamide dehydr 90.0 0.13 4.3E-06 49.9 2.5 37 307-343 219-256 (470)
87 2yqu_A 2-oxoglutarate dehydrog 89.7 0.16 5.4E-06 49.1 2.9 43 307-349 209-252 (455)
88 2i0z_A NAD(FAD)-utilizing dehy 89.7 0.14 4.9E-06 49.4 2.6 26 84-109 36-64 (447)
89 3nlc_A Uncharacterized protein 89.6 0.11 3.8E-06 51.8 1.7 28 84-111 117-147 (549)
90 2oln_A NIKD protein; flavoprot 89.5 0.19 6.3E-06 47.3 3.1 41 306-346 153-194 (397)
91 3pvc_A TRNA 5-methylaminomethy 89.3 0.44 1.5E-05 48.7 6.0 28 84-111 274-304 (689)
92 1v59_A Dihydrolipoamide dehydr 89.3 0.18 6E-06 49.0 2.9 36 308-343 226-264 (478)
93 2qa1_A PGAE, polyketide oxygen 89.3 0.27 9.1E-06 48.3 4.2 51 83-152 20-73 (500)
94 3nyc_A D-arginine dehydrogenas 89.2 0.37 1.3E-05 44.5 5.0 31 82-112 17-49 (381)
95 4fk1_A Putative thioredoxin re 89.2 0.15 5E-06 46.3 2.1 30 80-110 8-44 (304)
96 3uox_A Otemo; baeyer-villiger 89.1 0.19 6.4E-06 50.1 3.0 45 79-124 10-61 (545)
97 2gag_A Heterotetrameric sarcos 89.1 0.17 6E-06 53.9 2.9 33 79-111 129-168 (965)
98 3d1c_A Flavin-containing putat 89.0 0.17 6E-06 46.7 2.5 41 308-348 216-258 (369)
99 2uzz_A N-methyl-L-tryptophan o 88.9 0.22 7.5E-06 46.2 3.1 41 306-346 149-190 (372)
100 1ojt_A Surface protein; redox- 88.8 0.18 6E-06 49.2 2.5 37 308-344 228-265 (482)
101 2gjc_A Thiazole biosynthetic e 88.8 0.16 5.5E-06 47.2 2.0 32 80-111 67-107 (326)
102 3qfa_A Thioredoxin reductase 1 88.8 0.18 6.1E-06 49.8 2.5 29 307-335 251-280 (519)
103 1lvl_A Dihydrolipoamide dehydr 88.4 0.14 4.9E-06 49.6 1.5 31 80-111 7-44 (458)
104 3c4a_A Probable tryptophan hyd 88.4 0.2 6.9E-06 47.0 2.5 25 82-106 8-37 (381)
105 1vdc_A NTR, NADPH dependent th 88.4 0.19 6.5E-06 45.8 2.2 33 80-112 10-53 (333)
106 2qa2_A CABE, polyketide oxygen 88.3 0.35 1.2E-05 47.5 4.3 50 84-152 22-74 (499)
107 3lad_A Dihydrolipoamide dehydr 88.2 0.19 6.4E-06 48.8 2.2 39 307-345 222-261 (476)
108 1trb_A Thioredoxin reductase; 87.9 0.23 7.9E-06 44.9 2.5 31 307-337 185-216 (320)
109 2q0l_A TRXR, thioredoxin reduc 87.8 0.27 9.1E-06 44.3 2.9 28 84-112 11-42 (311)
110 2gf3_A MSOX, monomeric sarcosi 87.8 0.27 9.3E-06 45.8 3.0 40 306-345 150-190 (389)
111 3dk9_A Grase, GR, glutathione 87.7 0.22 7.5E-06 48.4 2.4 37 308-344 230-269 (478)
112 2gag_B Heterotetrameric sarcos 87.6 0.27 9.3E-06 46.1 2.9 48 298-345 163-215 (405)
113 1d4d_A Flavocytochrome C fumar 87.3 0.28 9.7E-06 49.0 2.9 31 80-110 128-165 (572)
114 2hqm_A GR, grase, glutathione 87.2 0.24 8.3E-06 48.2 2.3 41 308-348 228-272 (479)
115 3dme_A Conserved exported prot 87.2 0.74 2.5E-05 42.2 5.5 30 83-112 13-45 (369)
116 3nix_A Flavoprotein/dehydrogen 87.1 0.34 1.2E-05 45.8 3.3 22 83-104 14-38 (421)
117 2bry_A NEDD9 interacting prote 87.1 0.3 1E-05 48.0 2.9 31 79-109 93-130 (497)
118 3alj_A 2-methyl-3-hydroxypyrid 87.0 0.3 1E-05 45.7 2.8 25 84-108 21-48 (379)
119 1ges_A Glutathione reductase; 87.0 0.27 9.2E-06 47.5 2.5 41 308-348 210-252 (450)
120 3fbs_A Oxidoreductase; structu 86.9 0.31 1.1E-05 43.3 2.7 47 298-348 166-213 (297)
121 3ic9_A Dihydrolipoamide dehydr 86.9 0.29 1E-05 47.8 2.7 38 307-345 216-256 (492)
122 3dgz_A Thioredoxin reductase 2 86.8 0.34 1.2E-05 47.3 3.1 38 307-344 226-265 (488)
123 2r9z_A Glutathione amide reduc 86.5 0.28 9.6E-06 47.5 2.4 41 308-348 209-251 (463)
124 1y56_A Hypothetical protein PH 86.5 0.27 9.1E-06 48.2 2.2 31 80-111 110-147 (493)
125 2wpf_A Trypanothione reductase 86.5 0.2 7E-06 49.0 1.4 43 307-349 236-280 (495)
126 1fec_A Trypanothione reductase 86.4 0.24 8.2E-06 48.5 1.8 42 307-348 232-275 (490)
127 1zk7_A HGII, reductase, mercur 86.4 0.31 1E-05 47.2 2.5 38 307-344 217-255 (467)
128 2a87_A TRXR, TR, thioredoxin r 86.3 0.38 1.3E-05 44.1 3.0 33 79-112 15-54 (335)
129 3jsk_A Cypbp37 protein; octame 86.3 0.28 9.7E-06 45.9 2.1 29 83-111 88-121 (344)
130 2oln_A NIKD protein; flavoprot 86.2 1.3 4.3E-05 41.4 6.7 26 82-107 12-40 (397)
131 2gmh_A Electron transfer flavo 86.0 0.28 9.6E-06 49.2 2.1 27 83-109 44-79 (584)
132 3v76_A Flavoprotein; structura 86.0 1.1 3.8E-05 42.8 6.3 47 299-345 125-172 (417)
133 3ics_A Coenzyme A-disulfide re 85.9 0.32 1.1E-05 48.6 2.4 41 307-349 229-270 (588)
134 3c96_A Flavin-containing monoo 85.7 0.44 1.5E-05 45.0 3.2 25 83-107 13-41 (410)
135 3axb_A Putative oxidoreductase 85.7 0.2 6.7E-06 48.1 0.7 42 305-346 180-238 (448)
136 1ebd_A E3BD, dihydrolipoamide 85.5 0.34 1.1E-05 46.7 2.3 36 308-343 213-249 (455)
137 3i3l_A Alkylhalidase CMLS; fla 85.3 0.4 1.4E-05 48.2 2.8 28 80-107 25-59 (591)
138 2a8x_A Dihydrolipoyl dehydroge 85.0 0.36 1.2E-05 46.7 2.3 38 308-345 214-253 (464)
139 3klj_A NAD(FAD)-dependent dehy 84.8 0.5 1.7E-05 44.7 3.1 33 76-108 7-46 (385)
140 1xdi_A RV3303C-LPDA; reductase 84.5 0.28 9.6E-06 48.0 1.3 42 308-349 225-267 (499)
141 1y56_B Sarcosine oxidase; dehy 84.5 0.48 1.6E-05 44.0 2.8 41 305-345 148-190 (382)
142 3oc4_A Oxidoreductase, pyridin 84.3 0.37 1.3E-05 46.4 2.0 39 307-345 190-229 (452)
143 2i0z_A NAD(FAD)-utilizing dehy 84.2 2.4 8.2E-05 40.6 7.7 47 303-349 131-179 (447)
144 3da1_A Glycerol-3-phosphate de 84.2 0.54 1.9E-05 46.9 3.2 38 306-343 170-209 (561)
145 2qcu_A Aerobic glycerol-3-phos 84.1 0.53 1.8E-05 46.1 3.0 42 305-346 148-193 (501)
146 1c0p_A D-amino acid oxidase; a 83.9 0.53 1.8E-05 43.6 2.8 23 83-105 15-40 (363)
147 2eq6_A Pyruvate dehydrogenase 83.9 0.5 1.7E-05 45.7 2.8 39 308-346 212-254 (464)
148 3ihm_A Styrene monooxygenase A 83.8 0.49 1.7E-05 45.3 2.6 25 80-104 24-55 (430)
149 3g3e_A D-amino-acid oxidase; F 83.6 0.29 9.8E-06 45.2 0.9 27 82-108 8-43 (351)
150 2wdq_A Succinate dehydrogenase 83.6 0.47 1.6E-05 47.7 2.4 26 83-108 16-44 (588)
151 1cjc_A Protein (adrenodoxin re 83.6 0.39 1.3E-05 46.6 1.8 32 79-110 7-47 (460)
152 1lqt_A FPRA; NADP+ derivative, 83.6 0.32 1.1E-05 47.2 1.2 33 79-111 4-50 (456)
153 3h28_A Sulfide-quinone reducta 83.3 0.39 1.3E-05 45.9 1.7 36 305-342 199-235 (430)
154 2gf3_A MSOX, monomeric sarcosi 83.2 1.4 4.9E-05 40.7 5.6 25 83-107 12-39 (389)
155 3h8l_A NADH oxidase; membrane 83.0 0.32 1.1E-05 46.0 0.9 40 306-349 218-258 (409)
156 3e1t_A Halogenase; flavoprotei 82.8 0.69 2.3E-05 45.4 3.3 21 84-104 17-40 (512)
157 2x3n_A Probable FAD-dependent 82.8 0.62 2.1E-05 43.7 2.9 24 83-106 15-41 (399)
158 1onf_A GR, grase, glutathione 82.7 0.56 1.9E-05 45.9 2.6 41 307-347 218-260 (500)
159 2uzz_A N-methyl-L-tryptophan o 82.7 1.5 5E-05 40.5 5.3 27 83-109 11-40 (372)
160 2x3n_A Probable FAD-dependent 82.6 1.4 4.7E-05 41.3 5.2 44 306-349 107-154 (399)
161 3iwa_A FAD-dependent pyridine 82.4 0.43 1.5E-05 46.2 1.6 44 306-349 202-246 (472)
162 1y56_B Sarcosine oxidase; dehy 82.3 1.7 5.7E-05 40.3 5.6 26 82-108 13-41 (382)
163 1ryi_A Glycine oxidase; flavop 82.3 1.1 3.9E-05 41.4 4.5 30 79-108 18-54 (382)
164 3c4n_A Uncharacterized protein 82.2 0.56 1.9E-05 44.4 2.3 26 83-108 45-75 (405)
165 3dgh_A TRXR-1, thioredoxin red 81.9 0.66 2.3E-05 45.0 2.7 38 308-345 229-268 (483)
166 1chu_A Protein (L-aspartate ox 81.9 0.66 2.2E-05 46.0 2.7 27 82-109 16-45 (540)
167 3pl8_A Pyranose 2-oxidase; sub 81.8 0.67 2.3E-05 46.9 2.8 26 85-110 57-85 (623)
168 3ihg_A RDME; flavoenzyme, anth 81.8 0.86 2.9E-05 44.8 3.6 25 83-107 14-41 (535)
169 3atr_A Conserved archaeal prot 81.2 0.62 2.1E-05 44.8 2.2 25 82-106 14-41 (453)
170 2h88_A Succinate dehydrogenase 80.9 0.67 2.3E-05 46.9 2.4 26 84-109 28-56 (621)
171 1fl2_A Alkyl hydroperoxide red 80.6 0.86 2.9E-05 40.9 2.9 26 84-111 11-39 (310)
172 4g6h_A Rotenone-insensitive NA 80.6 1 3.5E-05 44.2 3.6 40 307-346 273-313 (502)
173 2bs2_A Quinol-fumarate reducta 80.4 0.68 2.3E-05 47.2 2.3 28 82-109 13-43 (660)
174 1k0i_A P-hydroxybenzoate hydro 80.4 0.6 2E-05 43.7 1.7 24 82-105 10-36 (394)
175 2r0c_A REBC; flavin adenine di 80.3 0.88 3E-05 45.1 3.0 26 83-108 35-63 (549)
176 3cgb_A Pyridine nucleotide-dis 80.3 0.68 2.3E-05 45.0 2.2 37 307-343 228-265 (480)
177 3nlc_A Uncharacterized protein 80.2 2.5 8.5E-05 42.0 6.2 44 306-349 220-265 (549)
178 2e5v_A L-aspartate oxidase; ar 80.0 0.86 2.9E-05 44.3 2.8 27 82-109 7-36 (472)
179 2vou_A 2,6-dihydroxypyridine h 79.9 1.8 6.3E-05 40.5 5.0 44 305-349 98-141 (397)
180 2cul_A Glucose-inhibited divis 79.8 0.82 2.8E-05 39.7 2.3 24 84-107 13-40 (232)
181 3kd9_A Coenzyme A disulfide re 79.5 0.71 2.4E-05 44.3 2.0 32 79-110 4-44 (449)
182 2rgh_A Alpha-glycerophosphate 78.9 0.97 3.3E-05 45.1 2.8 36 306-341 188-225 (571)
183 3fg2_P Putative rubredoxin red 78.8 1.1 3.7E-05 42.3 3.0 44 306-349 184-229 (404)
184 2v3a_A Rubredoxin reductase; a 78.7 3.2 0.00011 38.7 6.2 43 307-349 188-231 (384)
185 3rp8_A Flavoprotein monooxygen 78.6 2.3 7.9E-05 39.8 5.3 43 306-349 127-169 (407)
186 3s5w_A L-ornithine 5-monooxyge 78.4 0.7 2.4E-05 44.3 1.6 30 318-347 329-361 (463)
187 2ywl_A Thioredoxin reductase r 78.2 2.8 9.5E-05 34.3 5.1 37 308-345 58-95 (180)
188 3ntd_A FAD-dependent pyridine 78.0 0.83 2.8E-05 45.1 2.0 43 307-349 193-255 (565)
189 1pj5_A N,N-dimethylglycine oxi 77.8 1.2 4.3E-05 46.3 3.4 40 306-345 151-192 (830)
190 2x8g_A Thioredoxin glutathione 77.8 1.1 3.8E-05 44.7 2.9 42 307-348 327-380 (598)
191 4eqs_A Coenzyme A disulfide re 77.1 1 3.5E-05 43.2 2.3 38 308-349 190-228 (437)
192 3fmw_A Oxygenase; mithramycin, 77.1 1.2 4.1E-05 44.4 2.9 25 83-107 58-85 (570)
193 2gag_B Heterotetrameric sarcos 77.0 3.2 0.00011 38.6 5.7 29 79-108 22-59 (405)
194 1nhp_A NADH peroxidase; oxidor 76.6 1 3.4E-05 43.2 2.1 40 307-348 192-233 (447)
195 2xdo_A TETX2 protein; tetracyc 76.3 2.6 9E-05 39.4 4.9 43 306-349 128-170 (398)
196 2e4g_A Tryptophan halogenase; 76.1 1.3 4.5E-05 43.8 2.8 42 307-349 195-240 (550)
197 1hyu_A AHPF, alkyl hydroperoxi 75.0 1.6 5.5E-05 42.9 3.1 31 79-111 213-250 (521)
198 2ywl_A Thioredoxin reductase r 74.5 1.8 6.3E-05 35.4 3.0 23 84-106 11-36 (180)
199 3iwa_A FAD-dependent pyridine 74.4 4.1 0.00014 39.1 5.8 29 79-107 4-41 (472)
200 2weu_A Tryptophan 5-halogenase 74.2 1.1 3.8E-05 43.7 1.7 42 307-349 174-218 (511)
201 1xdi_A RV3303C-LPDA; reductase 73.9 3.7 0.00013 39.8 5.4 27 84-111 12-44 (499)
202 2cdu_A NADPH oxidase; flavoenz 73.8 1.4 4.7E-05 42.3 2.2 41 307-348 192-234 (452)
203 3g5s_A Methylenetetrahydrofola 73.8 1.6 5.4E-05 41.9 2.6 28 84-111 11-41 (443)
204 2pyx_A Tryptophan halogenase; 73.8 1.6 5.6E-05 42.8 2.8 41 308-349 177-221 (526)
205 2aqj_A Tryptophan halogenase, 73.4 1.7 5.7E-05 42.8 2.8 43 306-349 165-210 (538)
206 2qa2_A CABE, polyketide oxygen 73.1 4 0.00014 39.8 5.5 40 307-346 108-148 (499)
207 3o0h_A Glutathione reductase; 73.1 3.3 0.00011 40.1 4.8 31 80-111 28-65 (484)
208 2qa1_A PGAE, polyketide oxygen 72.7 4.2 0.00014 39.6 5.5 40 307-346 107-147 (500)
209 3lxd_A FAD-dependent pyridine 72.7 5.7 0.0002 37.4 6.3 44 306-349 194-239 (415)
210 2dkh_A 3-hydroxybenzoate hydro 72.6 2.5 8.7E-05 42.6 4.0 23 84-106 42-68 (639)
211 3vrd_B FCCB subunit, flavocyto 72.5 1.7 5.8E-05 40.7 2.5 32 318-349 215-246 (401)
212 3lxd_A FAD-dependent pyridine 72.0 2 7E-05 40.5 3.0 31 79-109 10-49 (415)
213 3fg2_P Putative rubredoxin red 71.6 7 0.00024 36.6 6.6 25 84-108 11-40 (404)
214 4b1b_A TRXR, thioredoxin reduc 71.4 2.1 7.3E-05 42.4 3.0 41 308-348 265-306 (542)
215 3ef6_A Toluene 1,2-dioxygenase 71.2 2.4 8.1E-05 40.1 3.2 42 308-349 187-229 (410)
216 2gqf_A Hypothetical protein HI 70.8 3.7 0.00013 38.8 4.4 45 301-345 104-153 (401)
217 1kf6_A Fumarate reductase flav 70.6 1.5 5E-05 44.2 1.6 27 82-108 13-44 (602)
218 2yqu_A 2-oxoglutarate dehydrog 70.5 5 0.00017 38.3 5.4 27 85-111 12-41 (455)
219 3cgv_A Geranylgeranyl reductas 68.8 4.2 0.00014 37.6 4.3 36 307-342 103-140 (397)
220 4hb9_A Similarities with proba 68.7 4.3 0.00015 37.5 4.4 41 307-349 113-154 (412)
221 3cp8_A TRNA uridine 5-carboxym 68.6 2.3 7.8E-05 43.1 2.5 29 80-108 23-59 (641)
222 2bc0_A NADH oxidase; flavoprot 68.1 2.7 9.4E-05 40.7 3.0 39 308-348 238-278 (490)
223 1m6i_A Programmed cell death p 67.6 7.7 0.00026 37.6 6.1 43 307-349 227-270 (493)
224 1mo9_A ORF3; nucleotide bindin 67.6 6.3 0.00021 38.5 5.5 33 79-111 44-83 (523)
225 3ihg_A RDME; flavoenzyme, anth 67.5 5.2 0.00018 39.1 4.9 39 307-345 121-164 (535)
226 2r9z_A Glutathione amide reduc 67.4 7.9 0.00027 37.1 6.1 32 79-111 5-43 (463)
227 1m6i_A Programmed cell death p 67.4 2.2 7.4E-05 41.6 2.1 29 79-107 12-49 (493)
228 3nix_A Flavoprotein/dehydrogen 66.3 6.5 0.00022 36.7 5.1 40 307-346 107-149 (421)
229 2zxi_A TRNA uridine 5-carboxym 66.0 2.6 9E-05 42.6 2.4 26 83-108 36-65 (637)
230 3axb_A Putative oxidoreductase 65.8 6.9 0.00024 37.0 5.3 26 83-108 32-61 (448)
231 3gyx_A Adenylylsulfate reducta 65.5 2.5 8.6E-05 43.0 2.2 23 83-105 31-62 (662)
232 3sx6_A Sulfide-quinone reducta 65.2 2.2 7.5E-05 40.7 1.6 35 306-342 208-243 (437)
233 1pj5_A N,N-dimethylglycine oxi 65.2 8.2 0.00028 40.1 6.1 25 82-106 12-40 (830)
234 1xhc_A NADH oxidase /nitrite r 64.3 3.2 0.00011 38.6 2.5 25 308-332 185-210 (367)
235 1jnr_A Adenylylsulfate reducta 64.3 3.4 0.00012 41.7 2.9 24 82-105 30-60 (643)
236 3oc4_A Oxidoreductase, pyridin 63.3 8.7 0.0003 36.6 5.5 30 79-108 3-41 (452)
237 2weu_A Tryptophan 5-halogenase 62.9 11 0.00038 36.4 6.2 23 82-104 10-38 (511)
238 1fec_A Trypanothione reductase 62.7 8.9 0.0003 37.1 5.5 32 80-111 5-52 (490)
239 3ces_A MNMG, tRNA uridine 5-ca 62.5 3.4 0.00012 41.9 2.5 28 80-107 30-65 (651)
240 2zbw_A Thioredoxin reductase; 61.8 13 0.00046 33.2 6.2 44 306-349 65-109 (335)
241 3atr_A Conserved archaeal prot 61.6 11 0.00039 35.7 6.0 40 307-346 101-145 (453)
242 3alj_A 2-methyl-3-hydroxypyrid 61.6 7.6 0.00026 35.8 4.6 41 306-349 107-148 (379)
243 4a9w_A Monooxygenase; baeyer-v 60.7 10 0.00035 34.0 5.3 39 307-345 77-117 (357)
244 2wpf_A Trypanothione reductase 60.7 11 0.00038 36.5 5.7 33 79-111 8-56 (495)
245 1pn0_A Phenol 2-monooxygenase; 60.5 4.4 0.00015 41.2 2.9 24 82-105 16-47 (665)
246 3e1t_A Halogenase; flavoprotei 60.4 12 0.0004 36.4 5.9 40 307-346 112-155 (512)
247 3ef6_A Toluene 1,2-dioxygenase 60.4 7.4 0.00025 36.6 4.3 29 80-108 4-41 (410)
248 1ges_A Glutathione reductase; 59.9 9 0.00031 36.5 4.9 32 79-111 5-43 (450)
249 1k0i_A P-hydroxybenzoate hydro 58.8 8.6 0.00029 35.5 4.4 40 307-346 104-146 (394)
250 4dna_A Probable glutathione re 58.5 11 0.00036 36.1 5.1 30 80-110 7-43 (463)
251 1q1r_A Putidaredoxin reductase 58.5 5.1 0.00017 38.1 2.8 42 308-349 193-238 (431)
252 2gqw_A Ferredoxin reductase; f 57.7 4.5 0.00015 38.1 2.3 38 308-349 189-227 (408)
253 1qo8_A Flavocytochrome C3 fuma 57.7 17 0.00059 35.7 6.7 42 305-346 249-295 (566)
254 3fmw_A Oxygenase; mithramycin, 57.6 3.4 0.00012 41.1 1.5 44 306-349 148-195 (570)
255 2qcu_A Aerobic glycerol-3-phos 57.5 16 0.00054 35.3 6.3 27 82-108 11-40 (501)
256 3hyw_A Sulfide-quinone reducta 57.3 4.9 0.00017 38.2 2.4 37 308-346 202-239 (430)
257 2hqm_A GR, grase, glutathione 56.7 10 0.00036 36.4 4.8 32 79-111 12-50 (479)
258 2e4g_A Tryptophan halogenase; 54.7 15 0.0005 36.1 5.5 26 79-104 26-61 (550)
259 4at0_A 3-ketosteroid-delta4-5a 54.7 18 0.0006 35.1 6.0 27 84-110 51-80 (510)
260 3ab1_A Ferredoxin--NADP reduct 54.4 17 0.00059 32.9 5.7 44 306-349 74-119 (360)
261 1onf_A GR, grase, glutathione 54.3 14 0.00049 35.7 5.3 31 80-111 4-41 (500)
262 2eq6_A Pyruvate dehydrogenase 54.1 16 0.00055 34.9 5.6 31 79-110 7-44 (464)
263 1ojt_A Surface protein; redox- 53.6 14 0.00049 35.4 5.2 32 80-111 8-46 (482)
264 1q1r_A Putidaredoxin reductase 53.4 15 0.00053 34.7 5.3 29 79-107 5-42 (431)
265 3c4n_A Uncharacterized protein 53.2 4.7 0.00016 37.8 1.6 40 306-345 172-221 (405)
266 2cdu_A NADPH oxidase; flavoenz 53.0 21 0.00073 33.8 6.2 25 84-108 10-39 (452)
267 2cul_A Glucose-inhibited divis 52.4 22 0.00075 30.3 5.7 42 307-349 69-113 (232)
268 4b1b_A TRXR, thioredoxin reduc 51.9 25 0.00084 34.7 6.6 30 80-109 44-88 (542)
269 3d1c_A Flavin-containing putat 51.7 23 0.00078 32.0 6.0 32 80-112 6-45 (369)
270 1d4d_A Flavocytochrome C fumar 51.2 20 0.00067 35.5 5.8 41 306-346 255-300 (572)
271 3lad_A Dihydrolipoamide dehydr 50.7 16 0.00056 34.8 5.1 29 81-109 6-41 (476)
272 1y0p_A Fumarate reductase flav 50.5 21 0.00072 35.1 5.9 41 306-346 255-300 (571)
273 2qae_A Lipoamide, dihydrolipoy 48.9 18 0.00061 34.5 5.0 32 80-111 4-42 (468)
274 2aqj_A Tryptophan halogenase, 48.5 27 0.00091 34.0 6.3 22 83-104 14-41 (538)
275 1n4w_A CHOD, cholesterol oxida 48.2 10 0.00034 36.9 3.1 24 84-107 15-41 (504)
276 3ntd_A FAD-dependent pyridine 48.2 24 0.00082 34.4 5.9 28 80-107 3-39 (565)
277 2v3a_A Rubredoxin reductase; a 48.1 9.2 0.00031 35.5 2.7 21 84-104 14-39 (384)
278 1w4x_A Phenylacetone monooxyge 47.9 20 0.00067 35.1 5.2 44 306-349 97-142 (542)
279 1kdg_A CDH, cellobiose dehydro 46.9 11 0.00038 36.9 3.2 27 318-344 209-236 (546)
280 1ebd_A E3BD, dihydrolipoamide 46.4 19 0.00064 34.2 4.7 25 85-110 14-41 (455)
281 3da1_A Glycerol-3-phosphate de 46.3 25 0.00084 34.7 5.6 28 83-110 27-57 (561)
282 1zmd_A Dihydrolipoyl dehydroge 46.0 22 0.00074 34.0 5.1 33 79-111 7-46 (474)
283 3gwf_A Cyclohexanone monooxyge 45.8 25 0.00085 34.5 5.6 45 305-349 89-135 (540)
284 1zk7_A HGII, reductase, mercur 45.5 27 0.00092 33.2 5.6 32 79-111 5-43 (467)
285 2q0l_A TRXR, thioredoxin reduc 44.9 35 0.0012 30.0 6.0 43 306-349 59-102 (311)
286 3ado_A Lambda-crystallin; L-gu 44.7 11 0.00038 34.6 2.6 27 77-103 5-38 (319)
287 3lzw_A Ferredoxin--NADP reduct 44.3 29 0.001 30.6 5.4 41 306-346 67-109 (332)
288 3q9t_A Choline dehydrogenase a 42.7 13 0.00046 36.9 3.0 21 85-105 17-41 (577)
289 4ap3_A Steroid monooxygenase; 42.0 31 0.001 33.9 5.5 44 306-349 102-147 (549)
290 3i3l_A Alkylhalidase CMLS; fla 41.3 24 0.00081 35.1 4.6 40 306-345 128-170 (591)
291 1ju2_A HydroxynitrIle lyase; f 41.2 11 0.00039 36.9 2.3 18 318-335 207-224 (536)
292 3f8d_A Thioredoxin reductase ( 41.1 31 0.0011 30.2 5.0 43 306-349 70-113 (323)
293 2gqw_A Ferredoxin reductase; f 40.8 39 0.0013 31.5 5.9 29 79-107 8-45 (408)
294 2gmh_A Electron transfer flavo 40.7 39 0.0013 33.4 6.1 38 306-343 144-184 (584)
295 2a8x_A Dihydrolipoyl dehydroge 40.6 25 0.00084 33.5 4.5 26 84-110 13-41 (464)
296 3vrd_B FCCB subunit, flavocyto 40.1 15 0.00053 34.0 2.9 27 79-105 3-38 (401)
297 1fl2_A Alkyl hydroperoxide red 38.9 32 0.0011 30.2 4.7 43 307-349 57-103 (310)
298 3urh_A Dihydrolipoyl dehydroge 38.6 36 0.0012 32.5 5.4 32 80-111 27-65 (491)
299 3t37_A Probable dehydrogenase; 37.3 16 0.00054 35.4 2.5 20 318-337 224-243 (526)
300 1vdc_A NTR, NADPH dependent th 36.6 30 0.001 30.8 4.1 41 307-349 71-112 (333)
301 1dxl_A Dihydrolipoamide dehydr 36.5 25 0.00085 33.4 3.8 33 79-111 7-46 (470)
302 1v59_A Dihydrolipoamide dehydr 36.4 28 0.00095 33.2 4.2 31 80-110 7-44 (478)
303 2gv8_A Monooxygenase; FMO, FAD 35.8 32 0.0011 32.5 4.4 35 308-344 120-154 (447)
304 1trb_A Thioredoxin reductase; 35.7 44 0.0015 29.3 5.2 33 79-112 6-45 (320)
305 3s5w_A L-ornithine 5-monooxyge 35.0 57 0.0019 30.6 6.1 31 80-110 32-74 (463)
306 3c96_A Flavin-containing monoo 34.2 21 0.0007 33.3 2.7 36 308-344 109-147 (410)
307 2bry_A NEDD9 interacting prote 33.7 30 0.001 33.4 3.8 37 306-342 166-206 (497)
308 4gcm_A TRXR, thioredoxin reduc 31.9 24 0.00081 31.2 2.7 29 79-107 146-181 (312)
309 3uox_A Otemo; baeyer-villiger 31.3 45 0.0015 32.7 4.7 45 305-349 89-135 (545)
310 3dgh_A TRXR-1, thioredoxin red 31.3 40 0.0014 32.1 4.3 33 79-111 10-58 (483)
311 2h88_A Succinate dehydrogenase 31.2 82 0.0028 31.5 6.7 41 306-346 155-200 (621)
312 3klj_A NAD(FAD)-dependent dehy 31.2 22 0.00074 33.2 2.3 31 79-109 147-184 (385)
313 2rgh_A Alpha-glycerophosphate 31.0 52 0.0018 32.4 5.2 27 82-108 40-69 (571)
314 1coy_A Cholesterol oxidase; ox 30.7 25 0.00086 34.1 2.7 22 85-106 22-46 (507)
315 3qvp_A Glucose oxidase; oxidor 29.7 26 0.00089 34.9 2.7 31 318-348 240-277 (583)
316 3ics_A Coenzyme A-disulfide re 29.2 49 0.0017 32.4 4.7 64 79-148 37-109 (588)
317 3lk7_A UDP-N-acetylmuramoylala 28.5 26 0.00089 33.4 2.4 70 79-149 10-99 (451)
318 4g6h_A Rotenone-insensitive NA 28.5 33 0.0011 33.3 3.1 33 73-105 37-76 (502)
319 2pyx_A Tryptophan halogenase; 27.9 78 0.0027 30.5 5.8 52 79-150 8-78 (526)
320 3fbs_A Oxidoreductase; structu 27.8 1E+02 0.0034 26.4 6.1 41 308-349 58-100 (297)
321 2wdq_A Succinate dehydrogenase 27.6 89 0.0031 30.8 6.2 41 306-346 143-189 (588)
322 2jbv_A Choline oxidase; alcoho 26.7 36 0.0012 33.4 3.1 28 308-335 210-239 (546)
323 3h8l_A NADH oxidase; membrane 26.6 36 0.0012 31.5 3.0 30 80-109 3-42 (409)
324 3ic9_A Dihydrolipoamide dehydr 26.5 67 0.0023 30.8 5.0 30 80-110 10-46 (492)
325 3fim_B ARYL-alcohol oxidase; A 26.2 35 0.0012 33.8 2.9 23 84-106 12-38 (566)
326 1hyu_A AHPF, alkyl hydroperoxi 26.1 63 0.0022 31.2 4.7 43 307-349 268-314 (521)
327 3dk9_A Grase, GR, glutathione 26.0 77 0.0026 30.0 5.3 31 80-111 22-59 (478)
328 2r0c_A REBC; flavin adenine di 25.9 51 0.0017 32.2 4.1 35 308-344 140-174 (549)
329 1gpe_A Protein (glucose oxidas 25.8 36 0.0012 33.7 2.9 22 85-106 35-60 (587)
330 2x5o_A UDP-N-acetylmuramoylala 25.6 35 0.0012 32.4 2.7 24 85-108 16-42 (439)
331 3itj_A Thioredoxin reductase 1 25.2 82 0.0028 27.6 5.0 42 306-348 84-129 (338)
332 1nhp_A NADH peroxidase; oxidor 24.7 67 0.0023 30.1 4.5 24 85-108 11-39 (447)
333 1kf6_A Fumarate reductase flav 24.6 1.2E+02 0.004 30.1 6.5 41 306-346 134-180 (602)
334 1lvl_A Dihydrolipoamide dehydr 24.2 55 0.0019 31.0 3.8 36 308-345 214-250 (458)
335 1y56_A Hypothetical protein PH 24.1 1.5E+02 0.0051 28.3 7.0 49 298-349 253-301 (493)
336 3dgz_A Thioredoxin reductase 2 24.1 77 0.0026 30.2 4.9 32 80-111 8-54 (488)
337 2bc0_A NADH oxidase; flavoprot 23.7 84 0.0029 30.0 5.1 30 79-108 36-75 (490)
338 2bs2_A Quinol-fumarate reducta 23.6 94 0.0032 31.3 5.6 42 306-347 158-204 (660)
339 1rp0_A ARA6, thiazole biosynth 23.2 1.1E+02 0.0037 26.7 5.4 33 306-338 119-153 (284)
340 3h28_A Sulfide-quinone reducta 22.9 78 0.0027 29.5 4.6 31 80-110 4-43 (430)
341 3hyw_A Sulfide-quinone reducta 22.9 90 0.0031 29.1 5.0 27 79-105 3-38 (430)
342 2dkh_A 3-hydroxybenzoate hydro 22.1 59 0.002 32.4 3.7 37 307-343 142-185 (639)
343 1xhc_A NADH oxidase /nitrite r 21.5 50 0.0017 30.3 2.8 30 79-108 144-180 (367)
344 4b63_A L-ornithine N5 monooxyg 20.8 75 0.0026 30.6 4.0 40 305-346 147-194 (501)
345 2a87_A TRXR, TR, thioredoxin r 20.7 91 0.0031 27.6 4.4 41 307-349 72-114 (335)
346 2zxi_A TRNA uridine 5-carboxym 20.5 1.1E+02 0.0039 30.7 5.3 43 306-349 123-168 (637)
347 3l8k_A Dihydrolipoyl dehydroge 20.0 1.2E+02 0.004 28.7 5.2 32 80-111 6-44 (466)
No 1
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.96 E-value=4.1e-28 Score=240.10 Aligned_cols=258 Identities=40% Similarity=0.698 Sum_probs=193.9
Q ss_pred hhhHhHhhh---cCCC--CEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCcccccCCC
Q psy7666 83 VIRILCTVL---RIST--PITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSS 157 (350)
Q Consensus 83 viaGLaaA~---~~G~--~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~ 157 (350)
+|+||+||+ ++|+ +|+||||++++||+++|.+..+|+.+|.|++++.+..+....+.++++++|+.+++.+....
T Consensus 11 GiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~ 90 (477)
T 3nks_A 11 GISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLDSEVLPVRGD 90 (477)
T ss_dssp BHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCGGGEEEECTT
T ss_pred cHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCcceeeecCCC
Confidence 459999998 6799 99999999999999999874469999999999976421123789999999998766653322
Q ss_pred CCCCcceEEEeCCeEEECCCChhhhcccCCCCCHHHHHHHHHHhhcCCCCCCCCcHHHHHHHhhChHHHHHHHHHhhhhc
Q psy7666 158 HPTAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFSILHDLTTKTVPKSDESIYDFVSRRFGSEVADYAVSSMICGI 237 (350)
Q Consensus 158 ~p~~~~~~i~~~g~~~~~p~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~Sv~~~l~~~~~~~~~~~~~~pl~~~~ 237 (350)
.|.....+++.+|+.+.+|..+..++.....+....+.+.+.+++.+....+++|+.+|++++++..+.+.++.|++.++
T Consensus 91 ~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~~~~~~~~~~~~~~ 170 (477)
T 3nks_A 91 HPAAQNRFLYVGGALHALPTGLRGLLRPSPPFSKPLFWAGLRELTKPRGKEPDETVHSFAQRRLGPEVASLAMDSLCRGV 170 (477)
T ss_dssp SHHHHCEEEEETTEEEECCCSSCC---CCTTSCSCSSHHHHTTTTSCCCCSSCCBHHHHHHHHHCHHHHHHTHHHHHHHH
T ss_pred CchhcceEEEECCEEEECCCChhhcccccchhhhHHHHHHHHhhhcCCCCCCCcCHHHHHHHhhCHHHHHHHHHHHhccc
Confidence 23334578889999999998765554433344433345555555544445678999999999999999999999999999
Q ss_pred ccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceEEEecCcHHHHHHHHHHhhc
Q psy7666 238 CAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSVWSVEGGLQTIVNTLGEHLS 317 (350)
Q Consensus 238 ~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~GG~~~L~~aLa~~L~ 317 (350)
|+.+++++|+.++++.++..+..+++++.+++... .+.+. .....+.....+...+++++||+++|+++|++.|.
T Consensus 171 ~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~ 245 (477)
T 3nks_A 171 FAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGA-GRTPQ----PDSALIRQALAERWSQWSLRGGLEMLPQALETHLT 245 (477)
T ss_dssp HSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC------C----CCCHHHHHHHHTTCSEEEETTCTTHHHHHHHHHHH
T ss_pred ccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhc-ccccC----CchhhhhhhcccCccEEEECCCHHHHHHHHHHHHH
Confidence 99999999999999999988888999888876421 10000 01111111112344689999999999999999998
Q ss_pred -CCCEEEeCcceeEEEEeCCe-EEEEeCCC
Q psy7666 318 -NKVEVKMDTTCTNLEFLEKG-VKAVDQPI 345 (350)
Q Consensus 318 -~g~~I~l~~~V~~I~~~~~g-v~V~~~~G 345 (350)
.|++|++|++|++|+.++++ |.|++.++
T Consensus 246 ~~g~~i~~~~~V~~i~~~~~~~~~v~~~~~ 275 (477)
T 3nks_A 246 SRGVSVLRGQPVCGLSLQAEGRWKVSLRDS 275 (477)
T ss_dssp HTTCEEECSCCCCEEEECGGGCEEEECSSC
T ss_pred hcCCEEEeCCEEEEEEEcCCceEEEEECCe
Confidence 88999999999999998777 88877544
No 2
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.94 E-value=1e-25 Score=223.11 Aligned_cols=247 Identities=23% Similarity=0.342 Sum_probs=188.8
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCcccccCCCCC
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSSHP 159 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~~p 159 (350)
+++||+||+ ++|++|+|||+++++|||++|++. +|+.+|.|++++.+.++ .+.++++++|+.+++.... +
T Consensus 25 G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~-~g~~~~~g~~~~~~~~~---~~~~~~~~~gl~~~~~~~~---~ 97 (478)
T 2ivd_A 25 GISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHAL-AGYLVEQGPNSFLDREP---ATRALAAALNLEGRIRAAD---P 97 (478)
T ss_dssp BHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEE-TTEEEESSCCCEETTCH---HHHHHHHHTTCGGGEECSC---S
T ss_pred CHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeecc-CCeeeecChhhhhhhhH---HHHHHHHHcCCcceeeecC---c
Confidence 349999997 579999999999999999999994 89999999999987665 8999999999976554321 2
Q ss_pred CCcceEEEeCCeEEECCCChhhhcccCCCCCHHHHHHHHHHhhcCC-CCCCCCcHHHHHHHhhChHHHHHHHHHhhhhcc
Q psy7666 160 TAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFSILHDLTTKT-VPKSDESIYDFVSRRFGSEVADYAVSSMICGIC 238 (350)
Q Consensus 160 ~~~~~~i~~~g~~~~~p~~~~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~~~~Sv~~~l~~~~~~~~~~~~~~pl~~~~~ 238 (350)
.....+++.+|+.+.+|.....++.. ..+.+.+..+.+.+.+... ...++.|+.+|+++.+++.+.+.++.|++.++|
T Consensus 98 ~~~~~~~~~~g~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~ 176 (478)
T 2ivd_A 98 AAKRRYVYTRGRLRSVPASPPAFLAS-DILPLGARLRVAGELFSRRAPEGVDESLAAFGRRHLGHRATQVLLDAVQTGIY 176 (478)
T ss_dssp SCCCEEEEETTEEEECCCSHHHHHTC-SSSCHHHHHHHHGGGGCCCCCTTCCCBHHHHHHHHTCHHHHHHTHHHHHHHHH
T ss_pred cccceEEEECCEEEECCCCHHHhccC-CCCCHHHHHHHhhhhhcCCCCCCCCCCHHHHHHHhhCHHHHHHHHHHHhceee
Confidence 23457888899988898876555543 3455556666666665432 235789999999999999999999999999999
Q ss_pred cCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhccc----ceEEEecCcHHHHHHHHHH
Q psy7666 239 AGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEK----WSVWSVEGGLQTIVNTLGE 314 (350)
Q Consensus 239 ~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~----~~~~~~~GG~~~L~~aLa~ 314 (350)
+.+++++|+.++++.+...+..+++++.++........+. . . + .... .+.++++||+++|+++|++
T Consensus 177 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~-~---~~~~~~~~~~~~~~~gG~~~l~~~l~~ 246 (478)
T 2ivd_A 177 AGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQA-----A-L-P---AGTAPKLSGALSTFDGGLQVLIDALAA 246 (478)
T ss_dssp CCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC--------------CCSCCCCCCEEEETTCTHHHHHHHHH
T ss_pred cCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccc-----c-C-c---ccccccccccEEEECCCHHHHHHHHHH
Confidence 9999999999888888877777788766664221000000 0 0 0 0001 4578999999999999999
Q ss_pred hhcCCCEEEeCcceeEEEEeCCeEEEEe---CCCceec
Q psy7666 315 HLSNKVEVKMDTTCTNLEFLEKGVKAVD---QPIHQMT 349 (350)
Q Consensus 315 ~L~~g~~I~l~~~V~~I~~~~~gv~V~~---~~G~~~~ 349 (350)
.++ ++|+++++|++|..++++|.|++ .+|++++
T Consensus 247 ~lg--~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ 282 (478)
T 2ivd_A 247 SLG--DAAHVGARVEGLAREDGGWRLIIEEHGRRAELS 282 (478)
T ss_dssp HHG--GGEESSEEEEEEECC--CCEEEEEETTEEEEEE
T ss_pred Hhh--hhEEcCCEEEEEEecCCeEEEEEeecCCCceEE
Confidence 995 79999999999999888888887 6776554
No 3
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.93 E-value=2.7e-25 Score=221.60 Aligned_cols=247 Identities=26% Similarity=0.417 Sum_probs=181.8
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCcccccCCCCC
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSSHP 159 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~~p 159 (350)
+++||+||+ ++|++|+|||+++++|||++|.+ .+|+.+|.|++++++.++ .+.++++++|+.+......
T Consensus 22 G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~---~~~~~~~~lgl~~~~~~~~---- 93 (504)
T 1sez_A 22 GVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVS-QDGLIWDEGANTMTESEG---DVTFLIDSLGLREKQQFPL---- 93 (504)
T ss_dssp SHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEE-ETTEEEESSCCCBCCCSH---HHHHHHHHTTCGGGEECCS----
T ss_pred CHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeec-cCCeEEecCCcccccCcH---HHHHHHHHcCCcccceecc----
Confidence 349999997 57999999999999999999999 499999999999987665 8999999999976544311
Q ss_pred CCcceEEEeCCeEEECCCChhhhcccCCCCCHHHHHHHHHHhhcCC------CCCCCCcHHHHHHHhhChHHHHHHHHHh
Q psy7666 160 TAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFSILHDLTTKT------VPKSDESIYDFVSRRFGSEVADYAVSSM 233 (350)
Q Consensus 160 ~~~~~~i~~~g~~~~~p~~~~~~~~~~~~l~~~~~~~~l~~~~~~~------~~~~~~Sv~~~l~~~~~~~~~~~~~~pl 233 (350)
.....+++.+|+.+.+|.+...+... ..+....+.+.+.+.+... ...+++|+.+|+++++++.+.+.++.|+
T Consensus 94 ~~~~~~~~~~g~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~ 172 (504)
T 1sez_A 94 SQNKRYIARNGTPVLLPSNPIDLIKS-NFLSTGSKLQMLLEPILWKNKKLSQVSDSHESVSGFFQRHFGKEVVDYLIDPF 172 (504)
T ss_dssp SCCCEEEESSSSEEECCSSHHHHHHS-SSSCHHHHHHHHTHHHHC----------CCCBHHHHHHHHHCHHHHHTTHHHH
T ss_pred CCCceEEEECCeEEECCCCHHHHhcc-ccCCHHHHHHHhHhhhccCcccccccCCCCccHHHHHHHHcCHHHHHHHHHHH
Confidence 12346778899888888775554432 2444444455443333211 1245799999999999999999999999
Q ss_pred hhhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHh--hhcccceEEEecCcHHHHHHH
Q psy7666 234 ICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRR--SRIEKWSVWSVEGGLQTIVNT 311 (350)
Q Consensus 234 ~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~--~~~~~~~~~~~~GG~~~L~~a 311 (350)
+.++|+.+++++|+.++++.++.+++.+++++.+++...+...... ....+.. ......+.++++||+++|+++
T Consensus 173 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~GG~~~l~~~ 248 (504)
T 1sez_A 173 VAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEK----KQGPPKTSANKKRQRGSFSFLGGMQTLTDA 248 (504)
T ss_dssp HHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC--------------CCCSCCSTTCSCBEETTCTHHHHHH
T ss_pred HccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccc----cccccchhhccccCCceEeeCcHHHHHHHH
Confidence 9999999999999999899999888888888777765432110000 0000000 000122478899999999999
Q ss_pred HHHhhcCCCEEEeCcceeEEEEeCCe------EEEEeC
Q psy7666 312 LGEHLSNKVEVKMDTTCTNLEFLEKG------VKAVDQ 343 (350)
Q Consensus 312 La~~L~~g~~I~l~~~V~~I~~~~~g------v~V~~~ 343 (350)
|++.|+ .++|++|++|++|.+++++ |.|++.
T Consensus 249 l~~~l~-~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~ 285 (504)
T 1sez_A 249 ICKDLR-EDELRLNSRVLELSCSCTEDSAIDSWSIISA 285 (504)
T ss_dssp HHTTSC-TTTEETTCCEEEEEEECSSSSSSCEEEEEEB
T ss_pred HHhhcc-cceEEcCCeEEEEEecCCCCcccceEEEEEc
Confidence 999984 2689999999999998877 777664
No 4
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.92 E-value=6.3e-24 Score=210.18 Aligned_cols=247 Identities=21% Similarity=0.299 Sum_probs=186.4
Q ss_pred ehhhHhHhhh---cCC--CCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCcccccCC
Q psy7666 82 LVIRILCTVL---RIS--TPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITS 156 (350)
Q Consensus 82 ~viaGLaaA~---~~G--~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~ 156 (350)
++|+||+||+ ++| ++|+|||+++++||++.|.+ .+|+.+|.|++++.+.++ .+.++++++|+.+++..
T Consensus 12 aG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~---~~~~l~~~lg~~~~~~~--- 84 (475)
T 3lov_A 12 GGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYR-EDGFTIERGPDSYVARKH---ILTDLIEAIGLGEKLVR--- 84 (475)
T ss_dssp CBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEEC-STTCCEESSCCCEETTST---HHHHHHHHTTCGGGEEE---
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEe-eCCEEEecCchhhhcccH---HHHHHHHHcCCcceEee---
Confidence 3459999998 568 99999999999999999999 599999999999988776 89999999999876553
Q ss_pred CCCCCcceEEEeCCeEEECCCCh--------hhhcccCCCCCHHHHHHHHHHhhcCC-C----CCCCCcHHHHHHHhhCh
Q psy7666 157 SHPTAQNRLIYVNKKLHKLPSNF--------FSLFKTHSPFSKPLIFSILHDLTTKT-V----PKSDESIYDFVSRRFGS 223 (350)
Q Consensus 157 ~~p~~~~~~i~~~g~~~~~p~~~--------~~~~~~~~~l~~~~~~~~l~~~~~~~-~----~~~~~Sv~~~l~~~~~~ 223 (350)
+.....+++.+|+.+.+|... ..+... ..+...... .+.+++.+. . ..+++|+.+|++++++.
T Consensus 85 --~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~ 160 (475)
T 3lov_A 85 --NNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQT-TLLTEEEKQ-EVADLLLHPSDSLRIPEQDIPLGEYLRPRLGD 160 (475)
T ss_dssp --CCCCCEEEEETTEEEECCSSEETTEESCHHHHTTC-SSSCHHHHH-HHHHHHHSCCTTCCCCSSCCBHHHHHHHHHCH
T ss_pred --cCCCceEEEECCEEEECCCcccccCcCchHHHhhc-cCCChhHHH-HhhCcccCCcccccCCCCCcCHHHHHHHHhCH
Confidence 223457888999998887642 223222 344443333 444444322 1 35789999999999999
Q ss_pred HHHHHHHHHhhhhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceEEEecC
Q psy7666 224 EVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSVWSVEG 303 (350)
Q Consensus 224 ~~~~~~~~pl~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~G 303 (350)
++.+.++.|++.++|+.+++++|+.+.++.+..++..++++..++... ...+.. ......| ...+..++++.|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~--~~~~~~~---~~~~~~~~~~~~ 233 (475)
T 3lov_A 161 ALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLM--RPLDQL--PQTPQTT---IKATGQFLSLET 233 (475)
T ss_dssp HHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHT--CC-------------------CCSEEEETT
T ss_pred HHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHh--cccccc--ccccccc---ccCCCcEEeeCC
Confidence 999999999999999999999999988888888887888887765421 000000 0000000 011345788999
Q ss_pred cHHHHHHHHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCCCcee
Q psy7666 304 GLQTIVNTLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQPIHQM 348 (350)
Q Consensus 304 G~~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~ 348 (350)
|+++|+++|++.+.. ++|+++++|++|++++++|.|++.+| ++
T Consensus 234 G~~~l~~~l~~~l~~-~~i~~~~~V~~i~~~~~~~~v~~~~g-~~ 276 (475)
T 3lov_A 234 GLESLIERLEEVLER-SEIRLETPLLAISREDGRYRLKTDHG-PE 276 (475)
T ss_dssp CHHHHHHHHHHHCSS-CEEESSCCCCEEEEETTEEEEECTTC-CE
T ss_pred hHHHHHHHHHhhccC-CEEEcCCeeeEEEEeCCEEEEEECCC-eE
Confidence 999999999999953 69999999999999999999999888 44
No 5
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.92 E-value=1.4e-24 Score=213.62 Aligned_cols=247 Identities=25% Similarity=0.371 Sum_probs=169.1
Q ss_pred hhhHhHhhh---cCC------CCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCcccc
Q psy7666 83 VIRILCTVL---RIS------TPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIP 153 (350)
Q Consensus 83 viaGLaaA~---~~G------~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~ 153 (350)
+|+||+||+ ++| ++|+||||++++|||+.|.+ .+|+.+|.|++++.+.++ .++++++++|+.+++..
T Consensus 14 GiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~-~~g~~~d~G~~~~~~~~~---~~~~l~~~lgl~~~~~~ 89 (470)
T 3i6d_A 14 GITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVK-KDGYIIERGPDSFLERKK---SAPQLVKDLGLEHLLVN 89 (470)
T ss_dssp SHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEEC-CTTCCEESSCCCEETTCT---HHHHHHHHTTCCTTEEE
T ss_pred CHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEec-cCCEEeccChhhhhhCCH---HHHHHHHHcCCcceeec
Confidence 349999998 568 99999999999999999999 499999999999988777 89999999999876553
Q ss_pred cCCCCCCCcceEEEeCCeEEECCCCh-hhhcccC------CCCCHHHHHHHHHHhhcC-CCCCCCCcHHHHHHHhhChHH
Q psy7666 154 ITSSHPTAQNRLIYVNKKLHKLPSNF-FSLFKTH------SPFSKPLIFSILHDLTTK-TVPKSDESIYDFVSRRFGSEV 225 (350)
Q Consensus 154 ~~~~~p~~~~~~i~~~g~~~~~p~~~-~~~~~~~------~~l~~~~~~~~l~~~~~~-~~~~~~~Sv~~~l~~~~~~~~ 225 (350)
+.....+++.+|+.+.+|... ..++..+ ..+......+.+.+.+.+ ....++.|+.+|+++.++...
T Consensus 90 -----~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 164 (470)
T 3i6d_A 90 -----NATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFILPASKTKDDQSLGEFFRRRVGDEV 164 (470)
T ss_dssp -----CCCCCEEEECSSCEEECCC---------------------CCSHHHHHHHHSCCCSSSSCCBHHHHHHHHSCHHH
T ss_pred -----CCCCccEEEECCEEEECCCCcccCCcCchHHhhccCcCCHHHHHHHhcCcccCCCCCCCCcCHHHHHHHhcCHHH
Confidence 123457888899888887532 1111100 111111122333344332 234578999999999999999
Q ss_pred HHHHHHHhhhhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceEEEecCcH
Q psy7666 226 ADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSVWSVEGGL 305 (350)
Q Consensus 226 ~~~~~~pl~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~GG~ 305 (350)
.+.++.|++.++|+.+++++|+...++.+..++..++++..++.... .... ... . .......++++.||+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~-~--~~~~~~~~~~~~~g~ 234 (470)
T 3i6d_A 165 VENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTR--PQGS-----GQQ-L--TAKKQGQFQTLSTGL 234 (470)
T ss_dssp HHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-----------------------------------------EEEETTCT
T ss_pred HHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhc--cccc-----ccc-c--cccCCceEEEeCChH
Confidence 99999999999999999999998887766555555566555543210 0000 000 0 000123578899999
Q ss_pred HHHHHHHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 306 QTIVNTLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
++|+++|++.+.. ++|+++++|++|++++++|.|++.+|++++
T Consensus 235 ~~l~~~l~~~l~~-~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ 277 (470)
T 3i6d_A 235 QTLVEEIEKQLKL-TKVYKGTKVTKLSHSGSCYSLELDNGVTLD 277 (470)
T ss_dssp HHHHHHHHHTCCS-EEEECSCCEEEEEECSSSEEEEESSSCEEE
T ss_pred HHHHHHHHHhcCC-CEEEeCCceEEEEEcCCeEEEEECCCCEEE
Confidence 9999999999953 699999999999999889999999997654
No 6
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.91 E-value=1.2e-23 Score=209.60 Aligned_cols=236 Identities=12% Similarity=0.127 Sum_probs=163.8
Q ss_pred ehhhHhHhhh---c-CCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCC-cccccCC
Q psy7666 82 LVIRILCTVL---R-ISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLAD-QVIPITS 156 (350)
Q Consensus 82 ~viaGLaaA~---~-~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~-~l~~~~~ 156 (350)
|+||||+||+ + .|++|+||||++++||+++|....+|+.+|.|+|+|++.++ .+.+++++++... ++..
T Consensus 18 aGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~~~~---~v~~l~~e~~~~~~~~~~--- 91 (513)
T 4gde_A 18 AGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSHYK---YFDDCLDEALPKEDDWYT--- 91 (513)
T ss_dssp CSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCCCBH---HHHHHHHHHSCSGGGEEE---
T ss_pred CcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecCCCH---HHHHHHHHhCCccceeEE---
Confidence 3449999997 3 59999999999999999999753589999999999988876 8999999998754 3332
Q ss_pred CCCCCcceEEEeCCeEEECCCChhhhcccCCCCCHHHHHH----HHHHhh-cCCCCCCCCcHHHHHHHhhChHHHHHHHH
Q psy7666 157 SHPTAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFS----ILHDLT-TKTVPKSDESIYDFVSRRFGSEVADYAVS 231 (350)
Q Consensus 157 ~~p~~~~~~i~~~g~~~~~p~~~~~~~~~~~~l~~~~~~~----~l~~~~-~~~~~~~~~Sv~~~l~~~~~~~~~~~~~~ 231 (350)
.....+++.+|+.+.+|... .+. .+....... ++.... ......++.|+.+|+.+.+++.+.+.++.
T Consensus 92 ---~~~~~~i~~~g~~~~~p~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~g~~l~~~~~~ 163 (513)
T 4gde_A 92 ---HQRISYVRCQGQWVPYPFQN--NIS---MLPKEEQVKCIDGMIDAALEARVANTKPKTFDEWIVRMMGTGIADLFMR 163 (513)
T ss_dssp ---EECCEEEEETTEEEESSGGG--GGG---GSCHHHHHHHHHHHHHHHHHHHTCCSCCCSHHHHHHHHHHHHHHHHTHH
T ss_pred ---ecCceEEEECCeEeecchhh--hhh---hcchhhHHHHHHHHHHHHHhhhcccccccCHHHHHHHhhhhhhhhhhcc
Confidence 22457889999998887531 111 111211122 111111 11234567899999999999999999999
Q ss_pred HhhhhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceEEEecCcHHHHHHH
Q psy7666 232 SMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSVWSVEGGLQTIVNT 311 (350)
Q Consensus 232 pl~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~GG~~~L~~a 311 (350)
|++.++|+.+++++|+.++.+.+..... .....+... ..... . + .......+.++||+++|+++
T Consensus 164 ~~~~~~~~~~~~~ls~~~~~~~~~~~~~--~~~~~~~~~---~~~~~-------~-~---~~~~~~~~~~~gG~~~l~~~ 227 (513)
T 4gde_A 164 PYNFKVWAVPTTKMQCAWLGERVAAPNL--KAVTTNVIL---GKTAG-------N-W---GPNATFRFPARGGTGGIWIA 227 (513)
T ss_dssp HHHHHHHSSCGGGBCSGGGCSSCCCCCH--HHHHHHHHH---TCCCC-------S-C---BTTBEEEEESSSHHHHHHHH
T ss_pred hhhhhhccCChHHhhHHHHHHhhcccch--hhhhhhhhh---ccccc-------c-c---ccccceeecccCCHHHHHHH
Confidence 9999999999999998776443321000 000111111 01000 0 0 01122345568999999999
Q ss_pred HHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 312 LGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 312 La~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
|++.|. .|++|++|++|++|..++++ |+..+|++++
T Consensus 228 l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ 264 (513)
T 4gde_A 228 VANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIG 264 (513)
T ss_dssp HHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEE
T ss_pred HHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEE
Confidence 999998 88999999999999887665 4567887764
No 7
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.87 E-value=1.1e-20 Score=183.94 Aligned_cols=216 Identities=12% Similarity=0.098 Sum_probs=158.8
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCcccccCCCC
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSSH 158 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~~ 158 (350)
++|+||+||+ ++|++|+|||+++++||++.++. .+|+.+|.|++++.+... .+.+.++++++|+..++.+.+
T Consensus 8 aGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~G~~~d~G~~~~~~~~~-~~~~~~l~~~lg~~~~~~~~~--- 82 (425)
T 3ka7_A 8 AGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLS-YKGFQLSSGAFHMLPNGP-GGPLACFLKEVEASVNIVRSE--- 82 (425)
T ss_dssp CBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEE-ETTEEEESSSCSCBTTGG-GSHHHHHHHHTTCCCCEEECC---
T ss_pred CCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeec-cCCcEEcCCCceEecCCC-ccHHHHHHHHhCCCceEEecC---
Confidence 3459999998 67999999999999999999999 599999999987754321 338999999999977665521
Q ss_pred CCCcceEEEeC-----------CeEEECCCChhhhcccCCCCCHHHHHHHHHHhhcCC-CCCCCCcHHHHHHHhhChHHH
Q psy7666 159 PTAQNRLIYVN-----------KKLHKLPSNFFSLFKTHSPFSKPLIFSILHDLTTKT-VPKSDESIYDFVSRRFGSEVA 226 (350)
Q Consensus 159 p~~~~~~i~~~-----------g~~~~~p~~~~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~~~~Sv~~~l~~~~~~~~~ 226 (350)
..++..+ ++.+.++.. . ..+...+..++...+.... ...++.|+.+|+++.+++...
T Consensus 83 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~ 151 (425)
T 3ka7_A 83 ----MTTVRVPLKKGNPDYVKGFKDISFNDF----P---SLLSYKDRMKIALLIVSTRKNRPSGSSLQAWIKSQVSDEWL 151 (425)
T ss_dssp ----CCEEEEESSTTCCSSTTCEEEEEGGGG----G---GGSCHHHHHHHHHHHHHTTTSCCCSSBHHHHHHHHCCCHHH
T ss_pred ----CceEEeecCCCcccccccccceehhhh----h---hhCCHHHHHHHHHHHHhhhhcCCCCCCHHHHHHHhcCCHHH
Confidence 1222221 444443321 1 1234444444444433211 335689999999999999999
Q ss_pred HHHHHHhhhhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceEEEecCcHH
Q psy7666 227 DYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSVWSVEGGLQ 306 (350)
Q Consensus 227 ~~~~~pl~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~GG~~ 306 (350)
+.++.|++..+++.+++++|+..+++.+... .. ..+.+++.||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~-----------~~------------------------~~~~~~~~gG~~ 196 (425)
T 3ka7_A 152 IKFADSFCGWALSLKSDEVPVEEVFEIIENM-----------YR------------------------FGGTGIPEGGCK 196 (425)
T ss_dssp HHHHHHHHHHHHSSCGGGSBHHHHHHHHHHH-----------HH------------------------HCSCEEETTSHH
T ss_pred HHHHHHHHHHHhCCCcccchHHHHHHHHHHH-----------Hh------------------------cCCccccCCCHH
Confidence 9999999999999999999987765544321 10 113577999999
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEE-EEeCCCceec
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVK-AVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~-V~~~~G~~~~ 349 (350)
.|+++|++.+. .|++|+++++|++|..++++|. |++. |++++
T Consensus 197 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ 240 (425)
T 3ka7_A 197 GIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRIHD 240 (425)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEEEE
T ss_pred HHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEEEE
Confidence 99999999998 8999999999999999988876 6664 66554
No 8
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.87 E-value=5e-21 Score=190.43 Aligned_cols=226 Identities=10% Similarity=0.058 Sum_probs=157.4
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCcccccCCCCCC
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSSHPT 160 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~~p~ 160 (350)
+|||+||+ ++|++|+|||+++|+|||++|.+ .+|+.+|+|++|+++.++ +++++++++|+.+++.+.... +.
T Consensus 49 ~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~d~G~~~~~~~~~---~~~~~l~~lgl~~~~~~~~~~-~~ 123 (495)
T 2vvm_A 49 YCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSN-IDGYPYEMGGTWVHWHQS---HVWREITRYKMHNALSPSFNF-SR 123 (495)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEE-ETTEEEECSCCCBCTTSH---HHHHHHHHTTCTTCEEESCCC-SS
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecc-cCCeeecCCCeEecCccH---HHHHHHHHcCCcceeeccccc-CC
Confidence 49999997 67999999999999999999999 489999999999988776 899999999997655542100 11
Q ss_pred CcceEEEeC--CeEEECCCC-hhhhcccCCCCCHHHHHHHHH-------Hh----hcCC-----CCCCCCcHHHHHHHhh
Q psy7666 161 AQNRLIYVN--KKLHKLPSN-FFSLFKTHSPFSKPLIFSILH-------DL----TTKT-----VPKSDESIYDFVSRRF 221 (350)
Q Consensus 161 ~~~~~i~~~--g~~~~~p~~-~~~~~~~~~~l~~~~~~~~l~-------~~----~~~~-----~~~~~~Sv~~~l~~~~ 221 (350)
....+++.+ |+.+.+|.. ....+. ..+..++. .. +.+. ...++.|+.+|+++..
T Consensus 124 ~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~ 196 (495)
T 2vvm_A 124 GVNHFQLRTNPTTSTYMTHEAEDELLR-------SALHKFTNVDGTNGRTVLPFPHDMFYVPEFRKYDEMSYSERIDQIR 196 (495)
T ss_dssp SCCEEEEESSTTCCEEECHHHHHHHHH-------HHHHHHHCSSSSTTTTTCSCTTSTTSSTTHHHHHTSBHHHHHHHHG
T ss_pred CceEEEecCCCCceeecCHHHHHHHHH-------HHHHHHHccchhhhhhcCCCCCCcccCcchhhhhhhhHHHHHHHhh
Confidence 234566666 665565542 111100 00001111 00 0000 0124689999998763
Q ss_pred --ChHHHHHHHHHhhhhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceEE
Q psy7666 222 --GSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSVW 299 (350)
Q Consensus 222 --~~~~~~~~~~pl~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 299 (350)
.....+.++.+++..+++.+++++|+..++..+... .+.. .++.. ..+.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~---~~~~-~~~~~------------------------~~~~~ 248 (495)
T 2vvm_A 197 DELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMS---GYTY-QGCMD------------------------CLMSY 248 (495)
T ss_dssp GGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHT---TSSH-HHHHH------------------------HHHSE
T ss_pred ccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHc---CCCH-HHHHh------------------------hhceE
Confidence 334556799999999999999999988776544211 1111 11110 11357
Q ss_pred EecCcHHHHHHHHHHhhc-CC-CEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 300 SVEGGLQTIVNTLGEHLS-NK-VEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 300 ~~~GG~~~L~~aLa~~L~-~g-~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
++.||+++|+++|++.+. .| ++|+++++|++|+.++++|.|++.+|++++
T Consensus 249 ~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ 300 (495)
T 2vvm_A 249 KFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFV 300 (495)
T ss_dssp EETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEE
T ss_pred EeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEE
Confidence 799999999999999998 76 899999999999998888999999987554
No 9
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.86 E-value=2.1e-21 Score=194.65 Aligned_cols=228 Identities=14% Similarity=0.169 Sum_probs=160.6
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCcccccCCCC
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSSH 158 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~~ 158 (350)
+++|||+||+ ++|++|+|||+++++|||++|.+..+|+.+|+|++++++.++ .++++++++|++.....
T Consensus 12 aG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~---~~~~l~~~lgl~~~~~~----- 83 (520)
T 1s3e_A 12 GGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQN---RILRLAKELGLETYKVN----- 83 (520)
T ss_dssp CBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCH---HHHHHHHHTTCCEEECC-----
T ss_pred CCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcH---HHHHHHHHcCCcceecc-----
Confidence 3459999997 679999999999999999999994239999999999987654 89999999999653322
Q ss_pred CCCcceEEEeCCeEEECCCChhhhcccCCCCCHHHHHHHH---HHhhcC------CC-----CCCCCcHHHHHHHhhChH
Q psy7666 159 PTAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFSIL---HDLTTK------TV-----PKSDESIYDFVSRRFGSE 224 (350)
Q Consensus 159 p~~~~~~i~~~g~~~~~p~~~~~~~~~~~~l~~~~~~~~l---~~~~~~------~~-----~~~~~Sv~~~l~~~~~~~ 224 (350)
.....+++.+|+.+.++..+... ..+....++.+++ ..+... +. ..++.|+.+|+++.+.+.
T Consensus 84 -~~~~~~~~~~g~~~~~~~~~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~ 159 (520)
T 1s3e_A 84 -EVERLIHHVKGKSYPFRGPFPPV---WNPITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTE 159 (520)
T ss_dssp -CSSEEEEEETTEEEEECSSSCCC---CSHHHHHHHHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHHHCSSH
T ss_pred -cCCceEEEECCEEEEecCCCCCC---CCHHHHHHHHHHHHHHHHHHhhcCcCCCccccchhhhhccCHHHHHHhhCCCH
Confidence 12345566788876665421100 0000011111211 111110 00 135689999999988888
Q ss_pred HHHHHHHHhhhhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceEEEecCc
Q psy7666 225 VADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSVWSVEGG 304 (350)
Q Consensus 225 ~~~~~~~pl~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~GG 304 (350)
..+.++.+++.+.++.+++++|+...+..+ ..++++.. +. .. ..+...+++.||
T Consensus 160 ~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~----~~~g~~~~-~~----~~-----------------~~~~~~~~~~gG 213 (520)
T 1s3e_A 160 SAKQLATLFVNLCVTAETHEVSALWFLWYV----KQCGGTTR-II----ST-----------------TNGGQERKFVGG 213 (520)
T ss_dssp HHHHHHHHHHHHHHSSCTTTSBHHHHHHHH----HTTTCHHH-HH----CS-----------------TTSTTSEEETTC
T ss_pred HHHHHHHHHHhhhcCCChHHhHHHHHHHHH----hhcCchhh-hc----cc-----------------CCCcceEEEeCC
Confidence 888999999999999999999987764332 22333211 11 00 012235789999
Q ss_pred HHHHHHHHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 305 LQTIVNTLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 305 ~~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
+++|+++|++.++ ++|++|++|++|.+++++|.|++.+|++++
T Consensus 214 ~~~l~~~l~~~lg--~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ 256 (520)
T 1s3e_A 214 SGQVSERIMDLLG--DRVKLERPVIYIDQTRENVLVETLNHEMYE 256 (520)
T ss_dssp THHHHHHHHHHHG--GGEESSCCEEEEECSSSSEEEEETTSCEEE
T ss_pred HHHHHHHHHHHcC--CcEEcCCeeEEEEECCCeEEEEECCCeEEE
Confidence 9999999999985 789999999999998888999999997664
No 10
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.86 E-value=1.7e-20 Score=182.92 Aligned_cols=216 Identities=15% Similarity=0.186 Sum_probs=157.6
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCcccccCCCC
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSSH 158 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~~ 158 (350)
++++||+||+ ++|++|+|||+++++||++.++. .+|+.+|.|++++.+... ...+.++++++|+..++...+
T Consensus 8 aGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~g~~~d~G~~~~~~~~~-~~~~~~l~~~lg~~~~~~~~~--- 82 (421)
T 3nrn_A 8 AGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLP-YKGFQLSTGALHMIPHGE-DGPLAHLLRILGAKVEIVNSN--- 82 (421)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEE-ETTEEEESSSCSEETTTT-SSHHHHHHHHHTCCCCEEECS---
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEec-cCCEEEecCCeEEEccCC-ChHHHHHHHHhCCcceEEECC---
Confidence 3459999998 67999999999999999999999 599999999988755321 238999999999976655532
Q ss_pred CCCcceEEEeCCeEEECCCChhhhcccCCCCCHHHHHHHHH---HhhcCCCCCCCCcHHHHHHHh-hChHHHHHHHHHhh
Q psy7666 159 PTAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFSILH---DLTTKTVPKSDESIYDFVSRR-FGSEVADYAVSSMI 234 (350)
Q Consensus 159 p~~~~~~i~~~g~~~~~p~~~~~~~~~~~~l~~~~~~~~l~---~~~~~~~~~~~~Sv~~~l~~~-~~~~~~~~~~~pl~ 234 (350)
+ ...++.+|+.+.+|..... +...+..++.. .........++.|+.+|+++. ++.+..+.++.|++
T Consensus 83 ~---~~~~~~~g~~~~~~~~~~~-------l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~ 152 (421)
T 3nrn_A 83 P---KGKILWEGKIFHYRESWKF-------LSVKEKAKALKLLAEIRMNKLPKEEIPADEWIKEKIGENEFLLSVLESFA 152 (421)
T ss_dssp S---SCEEEETTEEEEGGGGGGG-------CC--------CCHHHHHTTCCCCCCSBHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred C---CeEEEECCEEEEcCCchhh-------CCHhHHHHHHHHHHHHHhccCCCCCCCHHHHHHHhcCCcHHHHHHHHHHH
Confidence 2 2345568888777653211 11111122111 111112234568999999988 89999999999999
Q ss_pred hhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceEEEecCcHHHHHHHHHH
Q psy7666 235 CGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSVWSVEGGLQTIVNTLGE 314 (350)
Q Consensus 235 ~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~GG~~~L~~aLa~ 314 (350)
.++++.+++++|+..+++.+... .. ..+.+++.||++.|+++|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~------------------------~~g~~~~~gG~~~l~~~l~~ 197 (421)
T 3nrn_A 153 GWADSVSLSDLTALELAKEIRAA-----------LR------------------------WGGPGLIRGGCKAVIDELER 197 (421)
T ss_dssp HHHHSSCGGGSBHHHHHHHHHHH-----------HH------------------------HCSCEEETTCHHHHHHHHHH
T ss_pred HHhcCCCcccCCHHHHHHHHHHH-----------hh------------------------cCCcceecCCHHHHHHHHHH
Confidence 99999999999987765544321 10 01357799999999999999
Q ss_pred hhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 315 HLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 315 ~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
.+. .|++|+++++|++|..++++| |+ .+|++++
T Consensus 198 ~~~~~G~~i~~~~~V~~i~~~~~~v-V~-~~g~~~~ 231 (421)
T 3nrn_A 198 IIMENKGKILTRKEVVEINIEEKKV-YT-RDNEEYS 231 (421)
T ss_dssp HHHTTTCEEESSCCEEEEETTTTEE-EE-TTCCEEE
T ss_pred HHHHCCCEEEcCCeEEEEEEECCEE-EE-eCCcEEE
Confidence 998 899999999999999988888 64 4566554
No 11
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.85 E-value=2.1e-20 Score=186.02 Aligned_cols=220 Identities=18% Similarity=0.207 Sum_probs=123.9
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCC----cccccC
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLAD----QVIPIT 155 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~----~l~~~~ 155 (350)
+++||+||. ++|++|+||||++++|||++|++ .+|+.||.|+|++.... .+.++++.+|... ++.+.+
T Consensus 10 G~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~-~~G~~~D~G~~~~~~~~----~~~~l~~~~g~~~~~~~~~~~~~ 84 (501)
T 4dgk_A 10 GFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYE-DQGFTFDAGPTVITDPS----AIEELFALAGKQLKEYVELLPVT 84 (501)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCC-------CEEE-ETTEEEECSCCCBSCTH----HHHHHHHTTTCCGGGTCCEEEES
T ss_pred cHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEE-eCCEEEecCceeecCch----hHHHHHHHhcchhhhceeeEecC
Confidence 449999997 78999999999999999999999 59999999999986432 5778888888542 222211
Q ss_pred CCCCCCcceEEEeCCeEEECCCChhhhcccC---CCCCHHHHHH---HHHHhhcC----CCCCCCCcHHHHHHH------
Q psy7666 156 SSHPTAQNRLIYVNKKLHKLPSNFFSLFKTH---SPFSKPLIFS---ILHDLTTK----TVPKSDESIYDFVSR------ 219 (350)
Q Consensus 156 ~~~p~~~~~~i~~~g~~~~~p~~~~~~~~~~---~~l~~~~~~~---~l~~~~~~----~~~~~~~Sv~~~l~~------ 219 (350)
| ...+.+.+|....++.+...+...+ .+-....+.+ .+...+.. ....+..++.+++..
T Consensus 85 ---~--~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (501)
T 4dgk_A 85 ---P--FYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRAAPQLAK 159 (501)
T ss_dssp ---S--SEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CCCCCCCHHHHHHSGGGTTT
T ss_pred ---c--ceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhccccccchhhhhhhhhhhhhh
Confidence 2 2345566787777776543221110 0100111122 22222211 112233455555432
Q ss_pred -------------hhChHHHHHHHHHhhhhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhH
Q psy7666 220 -------------RFGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESE 286 (350)
Q Consensus 220 -------------~~~~~~~~~~~~pl~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~ 286 (350)
.+.++..+.++... ...++.++...++.. .++.
T Consensus 160 l~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~g~~p~~~~~~~-----------------~~~~---------------- 205 (501)
T 4dgk_A 160 LQAWRSVYSKVASYIEDEHLRQAFSFH-SLLVGGNPFATSSIY-----------------TLIH---------------- 205 (501)
T ss_dssp SHHHHHHHHHHHTTCCCHHHHHHHHHH-HHHHHSCC--CCCTH-----------------HHHH----------------
T ss_pred hhhcccHHHHHHHHhccHHHHhhhhhh-hcccCCCcchhhhhh-----------------hhhh----------------
Confidence 22222111111100 001111111111000 0000
Q ss_pred HHHhhhcccceEEEecCcHHHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEE-EEeCCCceecC
Q psy7666 287 LYRRSRIEKWSVWSVEGGLQTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVK-AVDQPIHQMTK 350 (350)
Q Consensus 287 ~y~~~~~~~~~~~~~~GG~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~-V~~~~G~~~~~ 350 (350)
+ .....+.++++||+++|+++|++.+. .|++|++|++|++|..++++++ |++.+|+++++
T Consensus 206 -~---~~~~~G~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~a 267 (501)
T 4dgk_A 206 -A---LEREWGVWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLT 267 (501)
T ss_dssp -H---HHSCCCEEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEEC
T ss_pred -h---hhccCCeEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEc
Confidence 0 01233578899999999999999999 8999999999999999999865 89999998763
No 12
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.82 E-value=1.3e-19 Score=180.50 Aligned_cols=232 Identities=12% Similarity=0.121 Sum_probs=158.3
Q ss_pred ehhhHhHhhh---cCC-CCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCcccccCCC
Q psy7666 82 LVIRILCTVL---RIS-TPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSS 157 (350)
Q Consensus 82 ~viaGLaaA~---~~G-~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~ 157 (350)
++++||+||+ ++| .+|+|||+++++||+++|....+|+.+|.|++++...++ .+.+++++++ +++.+
T Consensus 17 ~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~~~~---~~~~l~~~~~--~~~~~---- 87 (484)
T 4dsg_A 17 AGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFSHYQ---YFDDVMDWAV--QGWNV---- 87 (484)
T ss_dssp CSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCCSBH---HHHHHHHHHC--SCEEE----
T ss_pred cCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCcccccChH---HHHHHHHHHh--hhhhh----
Confidence 3459999997 567 899999999999999999632589999999999977665 8999999985 33333
Q ss_pred CCCCcceEEEeCCeEEECCCChhhhcccCCCCCHHHHHHHHHHhhc---CCCCCCCCcHHHHHHHhhChHHHHHHHHHhh
Q psy7666 158 HPTAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFSILHDLTT---KTVPKSDESIYDFVSRRFGSEVADYAVSSMI 234 (350)
Q Consensus 158 ~p~~~~~~i~~~g~~~~~p~~~~~~~~~~~~l~~~~~~~~l~~~~~---~~~~~~~~Sv~~~l~~~~~~~~~~~~~~pl~ 234 (350)
.....+++.+|+.+++|... .+. .+......+.+..++. .....+++|+.+|+++++|..+++.++.|++
T Consensus 88 --~~~~~~~~~~g~~~~~P~~~--~~~---~l~~~~~~~~~~~ll~~~~~~~~~~~~s~~e~~~~~~g~~~~~~~~~p~~ 160 (484)
T 4dsg_A 88 --LQRESWVWVRGRWVPYPFQN--NIH---RLPEQDRKRCLDELVRSHARTYTEPPNNFEESFTRQFGEGIADIFMRPYN 160 (484)
T ss_dssp --EECCCEEEETTEEEESSGGG--CGG---GSCHHHHHHHHHHHHHHHHCCCSSCCSSHHHHHHHHHHHHHCCCCCHHHH
T ss_pred --ccCceEEEECCEEEEeCccc--hhh---hCCHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHhHHHHHHHHHHHHH
Confidence 22457888999999998321 111 2233223333332221 1233578999999999999999999999999
Q ss_pred hhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceEEE-ecCcHHHHHHHHH
Q psy7666 235 CGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSVWS-VEGGLQTIVNTLG 313 (350)
Q Consensus 235 ~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~-~~GG~~~L~~aLa 313 (350)
.++|+.+++++|+.++++.+.... ...++.+++... .... + .....+.+ +.||+++|+++|+
T Consensus 161 ~~v~~~~~~~ls~~~~~~r~~~~~--l~~~~~~~~~~~--~~~~---------~----~~~~~f~yp~~gG~~~l~~~la 223 (484)
T 4dsg_A 161 FKVWAVPPCLMSTEWVEERVAPVD--LERIRRNIQENR--DDLG---------W----GPNATFRFPQRGGTGIIYQAIK 223 (484)
T ss_dssp HHHHSSCGGGBCSSSCTTTSCCCC--HHHHHHHHHHTC--CCCC---------C----STTSEEEEESSSCTHHHHHHHH
T ss_pred hhhcCCCHHHhcHHHHhccccCCC--HHHHHHHHhhcc--cccC---------C----CccceEEeecCCCHHHHHHHHH
Confidence 999999999999987654332100 001122332110 0000 0 00112344 4699999999999
Q ss_pred HhhcCCCEEEeC--cceeEEEEeCCeEEEEeCCCceec
Q psy7666 314 EHLSNKVEVKMD--TTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 314 ~~L~~g~~I~l~--~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
+.++ ..+|+++ ++|++|..++++|. ..+|++++
T Consensus 224 ~~l~-~~~i~~~~~~~V~~I~~~~~~v~--~~~G~~~~ 258 (484)
T 4dsg_A 224 EKLP-SEKLTFNSGFQAIAIDADAKTIT--FSNGEVVS 258 (484)
T ss_dssp HHSC-GGGEEECGGGCEEEEETTTTEEE--ETTSCEEE
T ss_pred hhhh-hCeEEECCCceeEEEEecCCEEE--ECCCCEEE
Confidence 9996 1289999 56999998877764 46776553
No 13
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.81 E-value=1.1e-20 Score=183.69 Aligned_cols=206 Identities=12% Similarity=0.113 Sum_probs=143.6
Q ss_pred ehhhHhHhhh---cC-CCCEEEEecCCCCCcceEEEecC-CCeEE-ecCCceecCCCCCchHHHHHHHHcCCCCcccccC
Q psy7666 82 LVIRILCTVL---RI-STPITLLESSSRLGGWVRSVQSP-EGLIF-EKGPRTIRPKGRLGANTLKLVEDLGLADQVIPIT 155 (350)
Q Consensus 82 ~viaGLaaA~---~~-G~~VtVlEa~drvGGRi~T~~~~-~G~~~-D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~ 155 (350)
++++||+||+ ++ |++|+|+|+++++||+++|.... +|+.+ |.|+++++..++ .++++++++|+.. .
T Consensus 15 aG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~---~~~~~~~~~g~~~---~-- 86 (399)
T 1v0j_A 15 SGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNK---RVWDYVRQFTDFT---D-- 86 (399)
T ss_dssp CSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCH---HHHHHHTTTCCBC---C--
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcH---HHHHHHHHhhhhh---c--
Confidence 3459999997 45 99999999999999999999832 78888 599999987766 9999999998721 1
Q ss_pred CCCCCCcceEEEeCCeEEECCCChh---hhcccCCCCCHHHHHHHHHHhhcCCCCCCCCcHHHHHHHhhChHHHHHHHHH
Q psy7666 156 SSHPTAQNRLIYVNKKLHKLPSNFF---SLFKTHSPFSKPLIFSILHDLTTKTVPKSDESIYDFVSRRFGSEVADYAVSS 232 (350)
Q Consensus 156 ~~~p~~~~~~i~~~g~~~~~p~~~~---~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~Sv~~~l~~~~~~~~~~~~~~p 232 (350)
.....+++.+|+.+++|..+. .++.. .+........+.+........++.|+.+|+.+.+++.+.+.++.|
T Consensus 87 ----~~~~~~~~~~G~~~~~p~~~~~~~~l~~~--~~~~~~~~~~l~~~~~~~~~~~~~s~~e~l~~~~g~~~~~~~~~~ 160 (399)
T 1v0j_A 87 ----YRHRVFAMHNGQAYQFPMGLGLVSQFFGK--YFTPEQARQLIAEQAAEIDTADAQNLEEKAISLIGRPLYEAFVKG 160 (399)
T ss_dssp ----CCCCEEEEETTEEEEESSSHHHHHHHHTS--CCCHHHHHHHHHHHGGGSCTTC----CCHHHHHHCHHHHHHHTHH
T ss_pred ----cccceEEEECCEEEeCCCCHHHHHHHhcc--cCCHHHHHHHHHHHhhccCCCCcccHHHHHHHHHhHHHHHHHHHH
Confidence 123467788999999987642 22221 122222233444443322235678999999999999999999999
Q ss_pred hhhhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceE-EEecCcHHHHHHH
Q psy7666 233 MICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSV-WSVEGGLQTIVNT 311 (350)
Q Consensus 233 l~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~-~~~~GG~~~L~~a 311 (350)
++.++|+.+++++|+.++.. +. .. . . .... .....+ .+++||+++|+++
T Consensus 161 ~~~~~~~~~~~~ls~~~~~~-~~--------~~---~-~--~~~~---------------~~~~~~~~~p~gG~~~l~~~ 210 (399)
T 1v0j_A 161 YTAKQWQTDPKELPAANITR-LP--------VR---Y-T--FDNR---------------YFSDTYEGLPTDGYTAWLQN 210 (399)
T ss_dssp HHHHHHTSCGGGSCGGGCSC-CC--------CC---S-S--SCCC---------------SCCCSEEECBTTHHHHHHHH
T ss_pred HHHhhcCCChhhcChHhhhc-ce--------eE---e-c--cccc---------------hhhhhhcccccccHHHHHHH
Confidence 99999999999999765310 00 00 0 0 0000 001123 3799999999999
Q ss_pred HHHhhcCCCEEEeCcceeEEEE
Q psy7666 312 LGEHLSNKVEVKMDTTCTNLEF 333 (350)
Q Consensus 312 La~~L~~g~~I~l~~~V~~I~~ 333 (350)
|++.+ |++|++|++|++|..
T Consensus 211 l~~~~--g~~I~l~~~V~~I~~ 230 (399)
T 1v0j_A 211 MAADH--RIEVRLNTDWFDVRG 230 (399)
T ss_dssp HTCST--TEEEECSCCHHHHHH
T ss_pred HHhcC--CeEEEECCchhhhhh
Confidence 99976 489999999999864
No 14
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.81 E-value=3.9e-19 Score=174.57 Aligned_cols=220 Identities=15% Similarity=0.166 Sum_probs=151.4
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCcccccCCCCC
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSSHP 159 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~~p 159 (350)
+++||+||+ ++|++|+|||+++++|||+.|... +|+.+|.|++++.+.++ .+.++++++|+...... +
T Consensus 14 G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~-~g~~~~~g~~~~~~~~~---~~~~~~~~~g~~~~~~~-----~ 84 (453)
T 2yg5_A 14 GPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTI-DGAVLEIGGQWVSPDQT---ALISLLDELGLKTFERY-----R 84 (453)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEE-TTEEEECSCCCBCTTCH---HHHHHHHHTTCCEEECC-----C
T ss_pred CHHHHHHHHHHHHCCCcEEEEECCCCCCCceecccc-CCceeccCCeEecCccH---HHHHHHHHcCCcccccc-----c
Confidence 349999997 579999999999999999999995 89999999999977654 89999999999643221 1
Q ss_pred CCcceEEEeC-CeEEECCCChhhhcccCCCCCH---HHHHH---HHHHh---hc---CC--C---CCCCCcHHHHHHHhh
Q psy7666 160 TAQNRLIYVN-KKLHKLPSNFFSLFKTHSPFSK---PLIFS---ILHDL---TT---KT--V---PKSDESIYDFVSRRF 221 (350)
Q Consensus 160 ~~~~~~i~~~-g~~~~~p~~~~~~~~~~~~l~~---~~~~~---~l~~~---~~---~~--~---~~~~~Sv~~~l~~~~ 221 (350)
. ....++.+ |+.+.++.... ++.. .++.+ .+..+ .. ++ . ..++.|+.+|+++.+
T Consensus 85 ~-~~~~~~~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~ 156 (453)
T 2yg5_A 85 E-GESVYISSAGERTRYTGDSF-------PTNETTKKEMDRLIDEMDDLAAQIGAEEPWAHPLARDLDTVSFKQWLINQS 156 (453)
T ss_dssp C-SEEEEECTTSCEEEECSSSC-------SCCHHHHHHHHHHHHHHHHHHHHHCSSCGGGSTTHHHHHSSBHHHHHHHHC
T ss_pred C-CCEEEEeCCCceeeccCCCC-------CCChhhHHHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhhccHHHHHHhhc
Confidence 1 22233333 55544432110 0110 01111 11111 11 00 0 124789999999988
Q ss_pred ChHHHHHHHHHhhhhcccCCcc-cccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceEEE
Q psy7666 222 GSEVADYAVSSMICGICAGDAK-KISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSVWS 300 (350)
Q Consensus 222 ~~~~~~~~~~pl~~~~~~~~~~-~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 300 (350)
.+...+.++.+++.+.|+.+++ ++|+...+..+. ..+++. .+. . ..+...++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~----~~g~~~-~~~----~------------------~~~~~~~~ 209 (453)
T 2yg5_A 157 DDAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAA----SAGSFS-HLV----D------------------EDFILDKR 209 (453)
T ss_dssp SCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHH----HTTCHH-HHH----C------------------HHHHTCEE
T ss_pred CCHHHHHHHHHHHHhhcccCCcccccHHHHHHHhc----cCCcHh-hhc----c------------------CCCcceEE
Confidence 8888888999999999999998 999877654332 223221 110 0 00113578
Q ss_pred ecCcHHHHHHHHHHhhcCCCEEEeCcceeEEEEeCCe-EEEEeCCCceec
Q psy7666 301 VEGGLQTIVNTLGEHLSNKVEVKMDTTCTNLEFLEKG-VKAVDQPIHQMT 349 (350)
Q Consensus 301 ~~GG~~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~g-v~V~~~~G~~~~ 349 (350)
+.||+++|+++|++.++ ++|++|++|++|.+++++ |.|++ +|++++
T Consensus 210 ~~gG~~~l~~~l~~~lg--~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ 256 (453)
T 2yg5_A 210 VIGGMQQVSIRMAEALG--DDVFLNAPVRTVKWNESGATVLAD-GDIRVE 256 (453)
T ss_dssp ETTCTHHHHHHHHHHHG--GGEECSCCEEEEEEETTEEEEEET-TTEEEE
T ss_pred EcCChHHHHHHHHHhcC--CcEEcCCceEEEEEeCCceEEEEE-CCeEEE
Confidence 99999999999999985 799999999999999888 99887 565543
No 15
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.80 E-value=5.8e-20 Score=177.78 Aligned_cols=213 Identities=12% Similarity=0.131 Sum_probs=151.5
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCcceEEEecC-CCeEE-ecCCceecCCCCCchHHHHHHHHcCCCCcccccCCC
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGGWVRSVQSP-EGLIF-EKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSS 157 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~-~G~~~-D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~ 157 (350)
+++||++|+ ++|++|+|+|+++++||+++|.... +|+.+ |.|+|++++.++ .++++++++|.. .+
T Consensus 12 G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~---~~~~~~~~l~~~---~~---- 81 (384)
T 2bi7_A 12 GFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNE---TVWNYVNKHAEM---MP---- 81 (384)
T ss_dssp SHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCH---HHHHHHHTTSCE---EE----
T ss_pred CHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCH---HHHHHHHHHhhh---cc----
Confidence 349999997 5699999999999999999998832 68876 999999987766 999999999852 22
Q ss_pred CCCCcceEEEeCCeEEECCCChhhhcccCC-CCCHHHHHHHHHHhhcCCCCCCCCcHHHHHHHhhChHHHHHHHHHhhhh
Q psy7666 158 HPTAQNRLIYVNKKLHKLPSNFFSLFKTHS-PFSKPLIFSILHDLTTKTVPKSDESIYDFVSRRFGSEVADYAVSSMICG 236 (350)
Q Consensus 158 ~p~~~~~~i~~~g~~~~~p~~~~~~~~~~~-~l~~~~~~~~l~~~~~~~~~~~~~Sv~~~l~~~~~~~~~~~~~~pl~~~ 236 (350)
.....+++.+|+.+.+|.++..+..... .+...+..+++.+..... ..++.|+.+|+.+.+++.+.+.++.|++.+
T Consensus 82 --~~~~~~~~~~g~~~~~P~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~sl~e~~~~~~g~~~~~~~~~p~~~~ 158 (384)
T 2bi7_A 82 --YVNRVKATVNGQVFSLPINLHTINQFFSKTCSPDEARALIAEKGDST-IADPQTFEEEALRFIGKELYEAFFKGYTIK 158 (384)
T ss_dssp --CCCCEEEEETTEEEEESCCHHHHHHHTTCCCCHHHHHHHHHHHSCCS-CSSCCBHHHHHHHHHCHHHHHHHTHHHHHH
T ss_pred --cccceEEEECCEEEECCCChhHHHHHhcccCCHHHHHHHHHHhhhcc-CCCCcCHHHHHHHhhcHHHHHHHHHHHHHH
Confidence 1123567789998899887533322111 123333445555544322 356889999999999999999999999999
Q ss_pred cccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceE-EEecCcHHHHHHHHHHh
Q psy7666 237 ICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSV-WSVEGGLQTIVNTLGEH 315 (350)
Q Consensus 237 ~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~-~~~~GG~~~L~~aLa~~ 315 (350)
+|+.+++++|+.++. .+. .... .++. | . ...+ .+++||+++|+++|++.
T Consensus 159 ~~~~~~~~ls~~~~~-r~~--------~~~~------~~~~----------~----~-~~~~~~~p~gG~~~l~~~l~~~ 208 (384)
T 2bi7_A 159 QWGMQPSELPASILK-RLP--------VRFN------YDDN----------Y----F-NHKFQGMPKCGYTQMIKSILNH 208 (384)
T ss_dssp HHSSCGGGSBGGGCC-SCC--------CCSS------SCCC----------S----C-CCSEEEEETTHHHHHHHHHHCS
T ss_pred HhCCCHHHhCHHHHh-ccc--------cccc------cccc----------c----c-cccccEEECcCHHHHHHHHHhc
Confidence 999999999976531 000 0000 0000 0 0 1123 38999999999999986
Q ss_pred hcCCCEEEeCccee-EEEEeCCeEEE
Q psy7666 316 LSNKVEVKMDTTCT-NLEFLEKGVKA 340 (350)
Q Consensus 316 L~~g~~I~l~~~V~-~I~~~~~gv~V 340 (350)
+ |++|++|++|+ +|....+.|.+
T Consensus 209 ~--g~~I~l~~~V~~~i~~~~d~VI~ 232 (384)
T 2bi7_A 209 E--NIKVDLQREFIVEERTHYDHVFY 232 (384)
T ss_dssp T--TEEEEESCCCCGGGGGGSSEEEE
T ss_pred C--CCEEEECCeeehhhhccCCEEEE
Confidence 5 58999999999 88654444433
No 16
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.79 E-value=1.5e-19 Score=173.73 Aligned_cols=204 Identities=14% Similarity=0.137 Sum_probs=145.9
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEe-cCCceecCCCCCchHHHHHHHHcCCCCcccccCCC
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFE-KGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSS 157 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D-~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~ 157 (350)
++++||+||+ ++|++|+|+|+++++||++.|.. .+|+.+| .|+|+++..++ .++++++++|... .
T Consensus 9 ~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~~G~~~~~~~~~---~~~~~~~~l~~~~---~---- 77 (367)
T 1i8t_A 9 SGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTED-CEGIQIHKYGAHIFHTNDK---YIWDYVNDLVEFN---R---- 77 (367)
T ss_dssp CSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEE-ETTEEEETTSCCCEEESCH---HHHHHHHTTSCBC---C----
T ss_pred cCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeec-cCCceeeccCCceecCCCH---HHHHHHHHhhhhh---h----
Confidence 4459999997 56999999999999999999998 4899995 99999987765 8999999988522 1
Q ss_pred CCCCcceEEEeCCeEEECCCChhhhcccCCCCCHHHHHHHHHHhhcCCCCCCCCcHHHHHHHhhChHHHHHHHHHhhhhc
Q psy7666 158 HPTAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFSILHDLTTKTVPKSDESIYDFVSRRFGSEVADYAVSSMICGI 237 (350)
Q Consensus 158 ~p~~~~~~i~~~g~~~~~p~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~Sv~~~l~~~~~~~~~~~~~~pl~~~~ 237 (350)
.....+++.+|+.+.+|.++..+..........+..+++.+........++.|+++|+.+++++.+.+.++.|++.++
T Consensus 78 --~~~~~~~~~~g~~~~~p~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~~~~~~g~~~~~~~~~p~~~~~ 155 (367)
T 1i8t_A 78 --FTNSPLAIYKDKLFNLPFNMNTFHQMWGVKDPQEAQNIINAQKKKYGDKVPENLEEQAISLVGEDLYQALIKGYTEKQ 155 (367)
T ss_dssp --CCCCCEEEETTEEEESSBSHHHHHHHHCCCCHHHHHHHHHHHTTTTCCCCCCSHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred --ccccceEEECCeEEEcCCCHHHHHHHhccCCHHHHHHHHHHHhhccCCCCCccHHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 112345678999999987643332111111223344555554433333568899999999999999999999999999
Q ss_pred ccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceE-EEecCcHHHHHHHHHHhh
Q psy7666 238 CAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSV-WSVEGGLQTIVNTLGEHL 316 (350)
Q Consensus 238 ~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~-~~~~GG~~~L~~aLa~~L 316 (350)
|+.+++++|+.++. .+ .. ... .+.. .....+ .+++||+++|+++|++
T Consensus 156 ~~~~~~~lsa~~~~-~l--------~~-~~~-----~~~~---------------~~~~~~~~~p~gG~~~l~~~l~~-- 203 (367)
T 1i8t_A 156 WGRSAKELPAFIIK-RI--------PV-RFT-----FDNN---------------YFSDRYQGIPVGGYTKLIEKMLE-- 203 (367)
T ss_dssp HSSCGGGSCTTSSC-CC--------CB-CSS-----SCCC---------------SCCCSEEECBTTCHHHHHHHHHT--
T ss_pred hCCChHHcCHHHHh-hc--------ee-eec-----cccc---------------cccchhhcccCCCHHHHHHHHhc--
Confidence 99999999975431 00 00 000 0000 001123 3799999999999998
Q ss_pred cCCCEEEeCcceeEEE
Q psy7666 317 SNKVEVKMDTTCTNLE 332 (350)
Q Consensus 317 ~~g~~I~l~~~V~~I~ 332 (350)
|++|++|++|++|.
T Consensus 204 --g~~i~l~~~V~~i~ 217 (367)
T 1i8t_A 204 --GVDVKLGIDFLKDK 217 (367)
T ss_dssp --TSEEECSCCGGGSH
T ss_pred --CCEEEeCCceeeec
Confidence 37999999999885
No 17
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.78 E-value=4e-19 Score=172.24 Aligned_cols=202 Identities=10% Similarity=0.157 Sum_probs=147.4
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEE-ecCCceecCCCCCchHHHHHHHHcCCCCcccccCCCC
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIF-EKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSSH 158 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~-D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~~ 158 (350)
+++||+||+ ++|++|+|+|+++++||++.+....+|+.+ |.|+|++++.++ .++++++++|.. .+
T Consensus 38 G~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~---~~~~~~~~~~~~---~~----- 106 (397)
T 3hdq_A 38 GFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSK---DVFEYLSRFTEW---RP----- 106 (397)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCH---HHHHHHHTSCCE---EE-----
T ss_pred cHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChH---HHHHHHHHhhhc---cc-----
Confidence 349999997 579999999999999999999873478875 999999987765 999999999852 11
Q ss_pred CCCcceEEEeCCeEEECCCChhh---hcccCCCCCHHHHHHHHHHhhcCCCCCCCCcHHHHHHHhhChHHHHHHHHHhhh
Q psy7666 159 PTAQNRLIYVNKKLHKLPSNFFS---LFKTHSPFSKPLIFSILHDLTTKTVPKSDESIYDFVSRRFGSEVADYAVSSMIC 235 (350)
Q Consensus 159 p~~~~~~i~~~g~~~~~p~~~~~---~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~Sv~~~l~~~~~~~~~~~~~~pl~~ 235 (350)
.....+++.+|+++++|.++.. +... .+.......++.+ .+....+++|+.+|+++++|..+++.++.|++.
T Consensus 107 -~~~~~~~~~~g~l~~lP~~~~~~~~l~~~--~~~~~~~~~~l~~--~~~~~~~~~s~~e~~~~~~G~~~~e~~~~py~~ 181 (397)
T 3hdq_A 107 -YQHRVLASVDGQLLPIPINLDTVNRLYGL--NLTSFQVEEFFAS--VAEKVEQVRTSEDVVVSKVGRDLYNKFFRGYTR 181 (397)
T ss_dssp -CCCBEEEEETTEEEEESCCHHHHHHHHTC--CCCHHHHHHHHHH--HCCCCSSCCBHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred -ccccceEEECCEEEEcCCChHHHHHhhcc--CCCHHHHHHHHhh--cccCCCCCcCHHHHHHHhcCHHHHHHHHHHHhC
Confidence 2235678899999999987533 2221 2344334444432 223346789999999999999999999999999
Q ss_pred hcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceE-EEecCcHHHHHHHHHH
Q psy7666 236 GICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSV-WSVEGGLQTIVNTLGE 314 (350)
Q Consensus 236 ~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~-~~~~GG~~~L~~aLa~ 314 (350)
++|+.+++++|+.++ ..+ .. ... .++ . | . ...+ ..++||+.+|+++|++
T Consensus 182 k~~~~~~~~Lsa~~~-~Rv--------p~-~~~-----~d~---------~-y----f-~~~~qg~P~gGy~~l~e~l~~ 231 (397)
T 3hdq_A 182 KQWGLDPSELDASVT-ARV--------PT-RTN-----RDN---------R-Y----F-ADTYQAMPLHGYTRMFQNMLS 231 (397)
T ss_dssp HHHSSCGGGSBTTTG-GGS--------CC-CSS-----CCC---------B-S----C-CCSEEEEETTCHHHHHHHHTC
T ss_pred chhCCCHHHHHHHHH-Hhc--------Cc-ccc-----cCc---------c-c----h-hhhheeccCCCHHHHHHHHHh
Confidence 999999999998643 111 00 000 000 0 0 0 1123 4699999999999987
Q ss_pred hhcCCCEEEeCcceeEEE
Q psy7666 315 HLSNKVEVKMDTTCTNLE 332 (350)
Q Consensus 315 ~L~~g~~I~l~~~V~~I~ 332 (350)
.. |++|+||++|+++.
T Consensus 232 ~~--g~~V~l~~~v~~~~ 247 (397)
T 3hdq_A 232 SP--NIKVMLNTDYREIA 247 (397)
T ss_dssp ST--TEEEEESCCGGGTT
T ss_pred cc--CCEEEECCeEEecc
Confidence 65 68999999998663
No 18
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.78 E-value=1.3e-18 Score=169.47 Aligned_cols=215 Identities=12% Similarity=0.095 Sum_probs=143.6
Q ss_pred hhhHhHhhh---cCC-CCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCcccccCCCC
Q psy7666 83 VIRILCTVL---RIS-TPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSSH 158 (350)
Q Consensus 83 viaGLaaA~---~~G-~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~~ 158 (350)
+++||+||+ ++| ++|+|||+++++|||++|.+ .+|+.+|.|++++.+.++ .+.++++++|++....
T Consensus 15 G~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~-~~G~~~d~G~~~~~~~~~---~~~~l~~~~g~~~~~~------ 84 (424)
T 2b9w_A 15 GPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPN-YHGRRYEMGAIMGVPSYD---TIQEIMDRTGDKVDGP------ 84 (424)
T ss_dssp SHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCE-ETTEECCSSCCCBCTTCH---HHHHHHHHHCCCCCSC------
T ss_pred CHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccC-CCCcccccCceeecCCcH---HHHHHHHHhCCccccc------
Confidence 349999997 679 99999999999999999999 489999999999977665 8999999999854221
Q ss_pred CCCcceEEEeCCeEEECCCC-hhhhcccCCCCC-HHHHHHHHHHhhcC---------CCCCCCCcHHHHHHHhhChHHHH
Q psy7666 159 PTAQNRLIYVNKKLHKLPSN-FFSLFKTHSPFS-KPLIFSILHDLTTK---------TVPKSDESIYDFVSRRFGSEVAD 227 (350)
Q Consensus 159 p~~~~~~i~~~g~~~~~p~~-~~~~~~~~~~l~-~~~~~~~l~~~~~~---------~~~~~~~Sv~~~l~~~~~~~~~~ 227 (350)
.....+++.+|+.+ .|.. ...... ... ...+...+...+.. ....+..|+.+|++++....+.+
T Consensus 85 -~~~~~~~~~~g~~~-~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~ 159 (424)
T 2b9w_A 85 -KLRREFLHEDGEIY-VPEKDPVRGPQ---VMAAVQKLGQLLATKYQGYDANGHYNKVHEDLMLPFDEFLALNGCEAARD 159 (424)
T ss_dssp -CCCEEEECTTSCEE-CGGGCTTHHHH---HHHHHHHHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHHHHHTTCGGGHH
T ss_pred -cccceeEcCCCCEe-ccccCcccchh---HHHHHHHHHHHHhhhhhhcccccchhhhhhhhccCHHHHHHhhCcHHHHH
Confidence 11234555566543 2221 000000 000 00011111111100 01234689999999876666777
Q ss_pred HHHHHhhhhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceEEEecCcHHH
Q psy7666 228 YAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSVWSVEGGLQT 307 (350)
Q Consensus 228 ~~~~pl~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~GG~~~ 307 (350)
.++.|++.+.|+ +++++|+...+..+ .. .++... . ....+++.||+++
T Consensus 160 ~~~~~~~~~~~~-~~~~~~a~~~~~~~--------~~-~~~~~~--~--------------------~~~~~~~~~g~~~ 207 (424)
T 2b9w_A 160 LWINPFTAFGYG-HFDNVPAAYVLKYL--------DF-VTMMSF--A--------------------KGDLWTWADGTQA 207 (424)
T ss_dssp HHTTTTCCCCCC-CTTTSBHHHHHHHS--------CH-HHHHHH--H--------------------HTCCBCCTTCHHH
T ss_pred HHHHHHHhhccC-ChHhcCHHHHHHhh--------hH-hhhhcc--c--------------------CCceEEeCChHHH
Confidence 777888887776 56778876643221 11 111110 0 1124568999999
Q ss_pred HHHHHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCCCc
Q psy7666 308 IVNTLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQPIH 346 (350)
Q Consensus 308 L~~aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~G~ 346 (350)
++++|++.+. .+|++|++|++|..++++|.|++.+|+
T Consensus 208 l~~~l~~~l~--~~v~~~~~V~~i~~~~~~v~v~~~~g~ 244 (424)
T 2b9w_A 208 MFEHLNATLE--HPAERNVDITRITREDGKVHIHTTDWD 244 (424)
T ss_dssp HHHHHHHHSS--SCCBCSCCEEEEECCTTCEEEEESSCE
T ss_pred HHHHHHHhhc--ceEEcCCEEEEEEEECCEEEEEECCCe
Confidence 9999999995 689999999999998888999988875
No 19
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.72 E-value=2.2e-16 Score=154.93 Aligned_cols=228 Identities=10% Similarity=0.008 Sum_probs=145.6
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCcceEEEe-cC-------------------CCeEEecCCceecCCCCCchHHH
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGGWVRSVQ-SP-------------------EGLIFEKGPRTIRPKGRLGANTL 139 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~-~~-------------------~G~~~D~Ga~~~~~~~~~~~~l~ 139 (350)
+++||+||. ++|++|+|+|+++++||+++|++ .. .++.+|+||+++.... .+.
T Consensus 15 G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~~~~----~l~ 90 (433)
T 1d5t_A 15 GLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLMANG----QLV 90 (433)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEETTS----HHH
T ss_pred CHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceeeccc----hHH
Confidence 348999987 67999999999999999999988 10 4578999999997654 799
Q ss_pred HHHHHcCCCCcccccCCCCCCCcceEEEeCCeEEECCCChhhhcccCCCCCH---HHHHHHHHHhhc--C-------CCC
Q psy7666 140 KLVEDLGLADQVIPITSSHPTAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSK---PLIFSILHDLTT--K-------TVP 207 (350)
Q Consensus 140 ~l~~elGl~~~l~~~~~~~p~~~~~~i~~~g~~~~~p~~~~~~~~~~~~l~~---~~~~~~l~~~~~--~-------~~~ 207 (350)
++++++|+...+... +. ...+++.+|+.+.+|.+..+.+.. ..... ..+.+++..... . ...
T Consensus 91 ~ll~~lgl~~~l~~~----~~-~~~~~~~~g~~~~~p~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 164 (433)
T 1d5t_A 91 KMLLYTEVTRYLDFK----VV-EGSFVYKGGKIYKVPSTETEALAS-NLMGMFEKRRFRKFLVFVANFDENDPKTFEGVD 164 (433)
T ss_dssp HHHHHHTGGGGCCEE----EC-CEEEEEETTEEEECCCSHHHHHHC-SSSCHHHHHHHHHHHHHHHHCCTTCGGGGTTCC
T ss_pred HHHHHcCCccceEEE----Ee-CceEEeeCCEEEECCCCHHHHhhC-cccChhhHHHHHHHHHHHHhhcccCchhccccc
Confidence 999999986543221 11 236677899988898874333221 12221 123333332211 0 012
Q ss_pred CCCCcHHHHHHHhhChHHHHHHHHHhhhhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHH
Q psy7666 208 KSDESIYDFVSRRFGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESEL 287 (350)
Q Consensus 208 ~~~~Sv~~~l~~~~~~~~~~~~~~pl~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~ 287 (350)
.+..|+.+|+++.+-......++...+....+.++.+.++...+..+..+ .... .
T Consensus 165 ~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~-----------~~s~-~------------- 219 (433)
T 1d5t_A 165 PQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLY-----------SESL-A------------- 219 (433)
T ss_dssp TTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHH-----------HHSC-C-------------
T ss_pred cccCCHHHHHHHcCCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHHH-----------HHHH-H-------------
Confidence 46789999998764444444444433222333445455544332222110 0000 0
Q ss_pred HHhhhcccceEEEecCcHHHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 288 YRRSRIEKWSVWSVEGGLQTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 288 y~~~~~~~~~~~~~~GG~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
......++++.||++.|+++|++.+. .|++|+++++|++|..+++++.+...+|++++
T Consensus 220 ----~~g~~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ 278 (433)
T 1d5t_A 220 ----RYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVAR 278 (433)
T ss_dssp ----SSSCCSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEE
T ss_pred ----hcCCCcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEE
Confidence 00012367899999999999999987 78999999999999998888764335676654
No 20
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.72 E-value=5.4e-17 Score=162.46 Aligned_cols=210 Identities=12% Similarity=0.042 Sum_probs=120.7
Q ss_pred hhHhHhhh---cCC-CCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCcccccCCCCC
Q psy7666 84 IRILCTVL---RIS-TPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSSHP 159 (350)
Q Consensus 84 iaGLaaA~---~~G-~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~~p 159 (350)
+|||+||+ ++| ++|+||||++|+|||++|.+..+|+.+|+|++|+++... +++++++.++|+....
T Consensus 18 ~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~~~--~~~~~~~~~lg~~~~~-------- 87 (516)
T 1rsg_A 18 IAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDTLT--NPLFLEEAQLSLNDGR-------- 87 (516)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCTTT--CHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecCCC--ChHHHHHHHhCCCCcc--------
Confidence 49999997 679 999999999999999999983279999999999986531 3788999898873210
Q ss_pred CCcceEEEeCCeEEECCCChhhhcccCCCCCHH----HHHHHHHHhhcCCCCCCCCcHHHHHHHhhChH------HHHHH
Q psy7666 160 TAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKP----LIFSILHDLTTKTVPKSDESIYDFVSRRFGSE------VADYA 229 (350)
Q Consensus 160 ~~~~~~i~~~g~~~~~p~~~~~~~~~~~~l~~~----~~~~~l~~~~~~~~~~~~~Sv~~~l~~~~~~~------~~~~~ 229 (350)
..+++.+|+.+.++......... ...... .+.++....+......++.|+.+|+.+.+... ....+
T Consensus 88 ---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~l~~~l~~~~~~l~~~~~~~ 163 (516)
T 1rsg_A 88 ---TRFVFDDDNFIYIDEERGRVDHD-KELLLEIVDNEMSKFAELEFHQHLGVSDCSFFQLVMKYLLQRRQFLTNDQIRY 163 (516)
T ss_dssp ---CCEECCCCCCEEEETTTEECTTC-TTTCHHHHHHHHHHHHHHHC-------CCBHHHHHHHHHHHHGGGSCHHHHHH
T ss_pred ---eeEEECCCCEEEEcCCCcccccc-HHHHHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccCHHHHHH
Confidence 01222222222221110000000 000111 11122222222222356789999987654321 11112
Q ss_pred HHHhhh---hcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceEEEecCcHH
Q psy7666 230 VSSMIC---GICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSVWSVEGGLQ 306 (350)
Q Consensus 230 ~~pl~~---~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~GG~~ 306 (350)
+.+++. ..++.+++.+|+...+ . ...+ ...++.| ++
T Consensus 164 ~~~~~~~~~~~~g~~~~~~s~~~~~----------------------~-----------------~~~~-~~~~~~g-~~ 202 (516)
T 1rsg_A 164 LPQLCRYLELWHGLDWKLLSAKDTY----------------------F-----------------GHQG-RNAFALN-YD 202 (516)
T ss_dssp HHHHHGGGHHHHTBCTTTSBHHHHC----------------------C-----------------CCSS-CCEEESC-HH
T ss_pred HHHHHHHHHHHhCCChHHCChHHHH----------------------h-----------------hccC-cchhhhC-HH
Confidence 222221 1223334444432210 0 0001 1245677 99
Q ss_pred HHHHHHHHhhcCCCEEEeCcceeEEEEe-CCeEEEEeCCCceec
Q psy7666 307 TIVNTLGEHLSNKVEVKMDTTCTNLEFL-EKGVKAVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~~g~~I~l~~~V~~I~~~-~~gv~V~~~~G~~~~ 349 (350)
+|+++|++.|+ +++|++|++|++|.++ +++|.|++.+|++++
T Consensus 203 ~l~~~l~~~l~-~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ 245 (516)
T 1rsg_A 203 SVVQRIAQSFP-QNWLKLSCEVKSITREPSKNVTVNCEDGTVYN 245 (516)
T ss_dssp HHHHHHHTTSC-GGGEETTCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred HHHHHHHHhCC-CCEEEECCEEEEEEEcCCCeEEEEECCCcEEE
Confidence 99999999996 4689999999999996 567999999997654
No 21
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.71 E-value=5.4e-16 Score=153.28 Aligned_cols=226 Identities=11% Similarity=0.070 Sum_probs=153.3
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCCcceEEEecC-------------------CCeEEecCCceecCCCCCchHHHHH
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLGGWVRSVQSP-------------------EGLIFEKGPRTIRPKGRLGANTLKL 141 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~-------------------~G~~~D~Ga~~~~~~~~~~~~l~~l 141 (350)
++|+++|. ++|++|+|+|+++++||++.++... .+|.+|++|+++.... .+.++
T Consensus 30 ~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~~~g----~L~~l 105 (475)
T 3p1w_A 30 LKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFILVGG----NLVKI 105 (475)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEETTS----HHHHH
T ss_pred HHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEeecCc----HHHHH
Confidence 48888887 6899999999999999999998631 1578999999987554 79999
Q ss_pred HHHcCCCCcccccCCCCCCCcceEEEe---------CCeEEECCCChhhhcccCCCCCHHHHHHHHH---Hhhc---C--
Q psy7666 142 VEDLGLADQVIPITSSHPTAQNRLIYV---------NKKLHKLPSNFFSLFKTHSPFSKPLIFSILH---DLTT---K-- 204 (350)
Q Consensus 142 ~~elGl~~~l~~~~~~~p~~~~~~i~~---------~g~~~~~p~~~~~~~~~~~~l~~~~~~~~l~---~~~~---~-- 204 (350)
+.+.|+...+.+.. . ...|++. +|+.+++|.+..++++. +.+++.++.++++ .... .
T Consensus 106 L~~~gv~~ylef~~----~-~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~-~lLs~~eK~~l~kFL~~l~~~~~~~~ 179 (475)
T 3p1w_A 106 LKKTRVTNYLEWLV----V-EGSYVYQHQKKGFLTSEKFIHKVPATDMEALVS-PLLSLMEKNRCKNFYQYVSEWDANKR 179 (475)
T ss_dssp HHHTTCGGGSCEEE----C-SEEEEEEEECCCSSSCCEEEEECCCSHHHHHTC-TTSCHHHHHHHHHHHHHHHHCCTTCG
T ss_pred HHHCCchheeEEEe----c-CcceEEecCccccccCCCceEeCCCCHHHHhhc-cCCCHHHHHHHHHHHHHHHhhhhccc
Confidence 99999987655532 1 2355554 57788999887777665 5677655554332 2211 0
Q ss_pred --CC--CCCCCcHHHHHHHh-hChHHHHHHHHHhhhhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCC
Q psy7666 205 --TV--PKSDESIYDFVSRR-FGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDL 279 (350)
Q Consensus 205 --~~--~~~~~Sv~~~l~~~-~~~~~~~~~~~pl~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~ 279 (350)
+. ..++.|+.+|+++. +...+.+.++.++.-. ...+..+.++...+..+..+. .++. .
T Consensus 180 ~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~-~~~~~~~~~a~~~l~ri~~y~-------~Sl~-~-------- 242 (475)
T 3p1w_A 180 NTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALY-LNDDYLKQPAYLTLERIKLYM-------QSIS-A-------- 242 (475)
T ss_dssp GGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCC-SSSGGGGSBHHHHHHHHHHHH-------HHHH-H--------
T ss_pred hhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhh-cCCCcccCCHHHHHHHHHHHH-------HHHh-h--------
Confidence 11 23578999999874 5566666444443222 122334456655555443221 1111 0
Q ss_pred CCcchhHHHHhhhcccceEEEecCcHHHHHHHHHHhhc-CCCEEEeCcceeEEEE-eCCe-EEEEeCCCceec
Q psy7666 280 SGYEESELYRRSRIEKWSVWSVEGGLQTIVNTLGEHLS-NKVEVKMDTTCTNLEF-LEKG-VKAVDQPIHQMT 349 (350)
Q Consensus 280 ~~~~~~~~y~~~~~~~~~~~~~~GG~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~-~~~g-v~V~~~~G~~~~ 349 (350)
| ....+.+++||++.|+++|++.+. .|++|+++++|++|.. ++++ +.|.+.+|++++
T Consensus 243 --------y-----g~s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~ 302 (475)
T 3p1w_A 243 --------F-----GKSPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAY 302 (475)
T ss_dssp --------H-----SSCSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred --------c-----CCCceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEE
Confidence 0 122478899999999999999998 8999999999999998 4454 578888887664
No 22
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.69 E-value=9.9e-16 Score=151.04 Aligned_cols=225 Identities=9% Similarity=0.062 Sum_probs=132.5
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCC-eE---------------Ee--------cCCceecCCCCCc
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGGWVRSVQSPEG-LI---------------FE--------KGPRTIRPKGRLG 135 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G-~~---------------~D--------~Ga~~~~~~~~~~ 135 (350)
+++||+||. ++|++|+|||+++++|||++|++. +| +. ++ +||+++....
T Consensus 20 G~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~-~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~P~~l~~~~--- 95 (453)
T 2bcg_G 20 GITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTL-SQLYEKFKQNPISKEERESKFGKDRDWNVDLIPKFLMANG--- 95 (453)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECH-HHHHHHHCSSCCCHHHHHHHHCCGGGCCEESSCCBEETTS---
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceec-cchhceeccCCccccCcchhcccccceeeccccceeecCc---
Confidence 349999987 689999999999999999999873 44 21 33 4444443332
Q ss_pred hHHHHHHHHcCCCCcccccCCCCCCCcceEEEeCCeEEECCCChhhhcccCCCCCH---HHHHHHHHHhhc---C----C
Q psy7666 136 ANTLKLVEDLGLADQVIPITSSHPTAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSK---PLIFSILHDLTT---K----T 205 (350)
Q Consensus 136 ~~l~~l~~elGl~~~l~~~~~~~p~~~~~~i~~~g~~~~~p~~~~~~~~~~~~l~~---~~~~~~l~~~~~---~----~ 205 (350)
.+.++++++|+...+... +. ...+++.+|+.+.+|.+..+.+.. ..+.. ..+.+++..... . +
T Consensus 96 -~l~~ll~~lg~~~~l~~~----~~-~~~~~~~~g~~~~~p~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~p~~~ 168 (453)
T 2bcg_G 96 -ELTNILIHTDVTRYVDFK----QV-SGSYVFKQGKIYKVPANEIEAISS-PLMGIFEKRRMKKFLEWISSYKEDDLSTH 168 (453)
T ss_dssp -HHHHHHHHHTGGGTCCEE----EC-CCEEEEETTEEEECCSSHHHHHHC-TTSCHHHHHHHHHHHHHHHHCBTTBGGGS
T ss_pred -HHHHHHHhcCCccceEEE----Ec-cceeEEeCCeEEECCCChHHHHhh-hccchhhHHHHHHHHHHHHHhccCCchhh
Confidence 899999999986533221 11 246777899999998873322221 12222 122333332211 0 0
Q ss_pred --CCCCCCcHHHHHHHhhChHHHHHHHHHhhhhcccCCc-ccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCc
Q psy7666 206 --VPKSDESIYDFVSRRFGSEVADYAVSSMICGICAGDA-KKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGY 282 (350)
Q Consensus 206 --~~~~~~Sv~~~l~~~~~~~~~~~~~~pl~~~~~~~~~-~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~ 282 (350)
...+..|+.+|+++.+-......++...+. +...+. ...+....+..+..+. ..+. .
T Consensus 169 ~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~-l~~~~~~~~~p~~~~~~~~~~~~-------~s~~-~----------- 228 (453)
T 2bcg_G 169 QGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMA-LWTNDDYLQQPARPSFERILLYC-------QSVA-R----------- 228 (453)
T ss_dssp TTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTS-CCSSSGGGGSBHHHHHHHHHHHH-------HHHH-H-----------
T ss_pred hccccccCCHHHHHHHhCCCHHHHHHHHHHHH-hccCccccCCchHHHHHHHHHHH-------HHHH-h-----------
Confidence 124678999999875443334444432111 111111 1112222222111100 0110 0
Q ss_pred chhHHHHhhhcccceEEEecCcHHHHHHHHHHhhc-CCCEEEeCcceeEEEEe--CCeE-EEEeCCCceec
Q psy7666 283 EESELYRRSRIEKWSVWSVEGGLQTIVNTLGEHLS-NKVEVKMDTTCTNLEFL--EKGV-KAVDQPIHQMT 349 (350)
Q Consensus 283 ~~~~~y~~~~~~~~~~~~~~GG~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~--~~gv-~V~~~~G~~~~ 349 (350)
| ....+.++.||++.|+++|++.+. .|++|+++++|++|..+ ++++ .|.+ +|++++
T Consensus 229 -----~-----~~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ 288 (453)
T 2bcg_G 229 -----Y-----GKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFK 288 (453)
T ss_dssp -----H-----SSCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEE
T ss_pred -----h-----cCCceEeeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEE
Confidence 0 012355899999999999999998 89999999999999998 6764 4555 466554
No 23
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.68 E-value=5.1e-16 Score=151.22 Aligned_cols=216 Identities=15% Similarity=0.175 Sum_probs=144.1
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCC---CeEEecCCceecCC-CCCchHHHHHHHHcCCCCccccc
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRLGGWVRSVQSPE---GLIFEKGPRTIRPK-GRLGANTLKLVEDLGLADQVIPI 154 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~---G~~~D~Ga~~~~~~-~~~~~~l~~l~~elGl~~~l~~~ 154 (350)
++++||+||+ ++|++|+|+|+++++||++.+.. .+ |..+|.|++|+++. ++ .++++++++|++.....
T Consensus 9 aG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~-~~cipg~~~~~g~~~~~~~~~~---~~~~~~~~~g~~~~~~~- 83 (431)
T 3k7m_X 9 GGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRE-SRNVPGLRVEIGGAYLHRKHHP---RLAAELDRYGIPTAAAS- 83 (431)
T ss_dssp CBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEE-CSSSTTCEEESSCCCBCTTTCH---HHHHHHHHHTCCEEECC-
T ss_pred CcHHHHHHHHHHHHcCCeEEEEecCCCccCeeccee-ccCCCCceEecCCeeeCCCCcH---HHHHHHHHhCCeeeecC-
Confidence 3459999997 67999999999999999999998 46 99999999999877 65 89999999999643221
Q ss_pred CCCCCCCcceEEE--eCCeEEEC---CCChhhhcccCCCCCHHHHHHHHHHh--hc---C----C-CCCCCCcHHHHHHH
Q psy7666 155 TSSHPTAQNRLIY--VNKKLHKL---PSNFFSLFKTHSPFSKPLIFSILHDL--TT---K----T-VPKSDESIYDFVSR 219 (350)
Q Consensus 155 ~~~~p~~~~~~i~--~~g~~~~~---p~~~~~~~~~~~~l~~~~~~~~l~~~--~~---~----~-~~~~~~Sv~~~l~~ 219 (350)
+. ...++ .+++.... +......+ ......+.... +. + . ...+ .|+.+|+.+
T Consensus 84 ----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~d-~s~~~~l~~ 149 (431)
T 3k7m_X 84 ----EF--TSFRHRLGPTAVDQAFPIPGSEAVAV-------EAATYTLLRDAHRIDLEKGLENQDLEDLD-IPLNEYVDK 149 (431)
T ss_dssp ----CC--CEECCBSCTTCCSSSSCCCGGGHHHH-------HHHHHHHHHHHTTCCTTTCTTSSSCGGGC-SBHHHHHHH
T ss_pred ----CC--CcEEEEecCCeecCCCCCCHHHHHHH-------HHHHHHHHHHHHhcCCCCCccCcchhhhc-CCHHHHHHh
Confidence 11 11222 23322111 11100000 00111111111 00 0 0 1123 899999988
Q ss_pred hhChHHHHHHHHHhhhhcccCCcccccHHHHHHHHHHHHHhccchHHH-HHHHhhhcCCCCCCcchhHHHHhhhcccceE
Q psy7666 220 RFGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKG-AIKEMMSKRPDLSGYEESELYRRSRIEKWSV 298 (350)
Q Consensus 220 ~~~~~~~~~~~~pl~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g-~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 298 (350)
.........++.+++.+.++.+++++|+...+..+.. .+..+.. +. ....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~----~~~~~~~~~~-------------------------~~~~ 200 (431)
T 3k7m_X 150 LDLPPVSRQFLLAWAWNMLGQPADQASALWMLQLVAA----HHYSILGVVL-------------------------SLDE 200 (431)
T ss_dssp HTCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHH----TTSCHHHHHH-------------------------TCCE
T ss_pred cCCCHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHh----cCCccceeec-------------------------chhh
Confidence 7666666677888888889999999998776543321 1111111 11 0112
Q ss_pred EEecCcHHHHHHHHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 299 WSVEGGLQTIVNTLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 299 ~~~~GG~~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
.+.+|++.+++++++.+ | +|++|++|++|++++++|.|++.+|++++
T Consensus 201 -~~~~g~~~l~~~~~~~~--g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ 247 (431)
T 3k7m_X 201 -VFSNGSADLVDAMSQEI--P-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQ 247 (431)
T ss_dssp -EETTCTHHHHHHHHTTC--S-CEESSCCEEEEECSSSSEEEEETTSCCEE
T ss_pred -hcCCcHHHHHHHHHhhC--C-ceEeCCEEEEEEEcCCeEEEEECCCCEEE
Confidence 78999999999999876 4 99999999999998889999999998654
No 24
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.64 E-value=9.6e-16 Score=147.42 Aligned_cols=70 Identities=24% Similarity=0.387 Sum_probs=59.6
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecC-CCCCcceEEEec---------CCCeEEecCCceecCCCCCchHHHHH
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESS-SRLGGWVRSVQS---------PEGLIFEKGPRTIRPKGRLGANTLKL 141 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~-drvGGRi~T~~~---------~~G~~~D~Ga~~~~~~~~~~~~l~~l 141 (350)
++|+|| |||+||+ ++|++|+|||++ +++|||+.|++. .+|+.+|.|++++...++ .++++
T Consensus 45 ~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~---~~~~~ 121 (376)
T 2e1m_A 45 KRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHP---LTLAL 121 (376)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCH---HHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHH---HHHHH
Confidence 456555 9999997 679999999999 999999999983 157899999999977665 89999
Q ss_pred HHHcCCCCcc
Q psy7666 142 VEDLGLADQV 151 (350)
Q Consensus 142 ~~elGl~~~l 151 (350)
++++|+....
T Consensus 122 ~~~lGl~~~~ 131 (376)
T 2e1m_A 122 IDKLGLKRRL 131 (376)
T ss_dssp HHHTTCCEEE
T ss_pred HHHcCCCcce
Confidence 9999997644
No 25
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.63 E-value=3.1e-17 Score=162.71 Aligned_cols=221 Identities=16% Similarity=0.228 Sum_probs=126.8
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEEEecC----------------CCeEEecCCceecCCCCCc
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRSVQSP----------------EGLIFEKGPRTIRPKGRLG 135 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~----------------~G~~~D~Ga~~~~~~~~~~ 135 (350)
++|+|| |||+||+ ++|++|+|||+++++|||++|.+.. +|..+|.|++++...+
T Consensus 12 ~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 88 (489)
T 2jae_A 12 HSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQSH--- 88 (489)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEETTS---
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhcccHH---
Confidence 445554 9999997 6799999999999999999998842 5789999999997543
Q ss_pred hHHHHHHHHcCCCCcccccCCCCCCCcceEEE-eC-----CeEEECCCChhhhcccCCCCCHHHHHHHHHHhhc-----C
Q psy7666 136 ANTLKLVEDLGLADQVIPITSSHPTAQNRLIY-VN-----KKLHKLPSNFFSLFKTHSPFSKPLIFSILHDLTT-----K 204 (350)
Q Consensus 136 ~~l~~l~~elGl~~~l~~~~~~~p~~~~~~i~-~~-----g~~~~~p~~~~~~~~~~~~l~~~~~~~~l~~~~~-----~ 204 (350)
.+.++++++|++.+... +.....+++ .+ |+...++.....+.. .+..++..... .
T Consensus 89 -~~~~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--------~~~~l~~~~~~~~~~~~ 154 (489)
T 2jae_A 89 -ITLDYCRELGVEIQGFG-----NQNANTFVNYQSDTSLSGQSVTYRAAKADTFG--------YMSELLKKATDQGALDQ 154 (489)
T ss_dssp -THHHHHHHHTCCEEEEC-----CCCTTSEEECCCSSTTTTCCEEHHHHHHHHHH--------HHHHHHHHHHHHTTTTT
T ss_pred -HHHHHHHHcCCceEEcc-----ccCCCceEEecCCcccCCccccHHHHhhhhhc--------cHHHHHHHHHhcccccc
Confidence 79999999999653332 122335665 55 554443321111100 01111111100 0
Q ss_pred -CCCCCCCcHHHHHHHhhChHHHHHHHHHhhhhcccCCccc----------ccHHHHHHHHHHHHHhccchHHHHHHHhh
Q psy7666 205 -TVPKSDESIYDFVSRRFGSEVADYAVSSMICGICAGDAKK----------ISVNFLMAKLFELEQLHGGVIKGAIKEMM 273 (350)
Q Consensus 205 -~~~~~~~Sv~~~l~~~~~~~~~~~~~~pl~~~~~~~~~~~----------lS~~~~l~~~~~~~~~~gs~l~g~~~~~~ 273 (350)
....+++|+.+|+++ ++....+..+.+.....|..++.. ..+.. +.. ..+. .++...
T Consensus 155 ~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~-~~~~~~- 222 (489)
T 2jae_A 155 VLSREDKDALSEFLSD-FGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQE----VIR-----SGIG-RNFSFD- 222 (489)
T ss_dssp TSCHHHHHHHHHHHHH-HTTCCTTSCCCCCGGGCEEECCCBTTCCCEECCCCCHHH----HHH-----HTTT-TTGGGG-
T ss_pred ccchhhHHHHHHHHHH-hhhhhhccccccccchhhccCCCcccccCCCCCCcCHHH----Hhh-----hhHH-HHHhhh-
Confidence 011234588999886 443211101111111111111000 01110 000 0000 000000
Q ss_pred hcCCCCCCcchhHHHHhhhcccceEEEecCcHHHHHHHHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCCC
Q psy7666 274 SKRPDLSGYEESELYRRSRIEKWSVWSVEGGLQTIVNTLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQPI 345 (350)
Q Consensus 274 ~~~~~~~~~~~~~~y~~~~~~~~~~~~~~GG~~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~G 345 (350)
.......++++++||+++|+++|++.|+ .++|++|++|++|.+++++|.|++.+|
T Consensus 223 ----------------~~~~~~~~~~~~~gG~~~l~~~l~~~l~-~~~i~~~~~V~~i~~~~~~v~v~~~~g 277 (489)
T 2jae_A 223 ----------------FGYDQAMMMFTPVGGMDRIYYAFQDRIG-TDNIVFGAEVTSMKNVSEGVTVEYTAG 277 (489)
T ss_dssp ----------------GCTTTSSSEEEETTCTTHHHHHHHHHHC-GGGEETTCEEEEEEEETTEEEEEEEET
T ss_pred ----------------hccccCccEEeecCCHHHHHHHHHHhcC-CCeEEECCEEEEEEEcCCeEEEEEecC
Confidence 0001133578999999999999999995 268999999999999999999988876
No 26
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.60 E-value=4e-15 Score=147.10 Aligned_cols=223 Identities=11% Similarity=0.090 Sum_probs=131.3
Q ss_pred ehhhHhHhhh---cCCC-CEEEEecCCCCCcceEEEecCCCeEEecCCceecCCC-CCchHHHHHHHH-cCCCCcccccC
Q psy7666 82 LVIRILCTVL---RIST-PITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKG-RLGANTLKLVED-LGLADQVIPIT 155 (350)
Q Consensus 82 ~viaGLaaA~---~~G~-~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~-~~~~~l~~l~~e-lGl~~~l~~~~ 155 (350)
++++||++|+ ++|+ +|+|+|+++++|||+++... +|+.+|+|++|+++.. +..+++++++++ +|+......
T Consensus 12 ~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~-~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lgl~~~~~~-- 88 (472)
T 1b37_A 12 AGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNF-AGINVELGANWVEGVNGGKMNPIWPIVNSTLKLRNFRSD-- 88 (472)
T ss_dssp CBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEE-TTEEEESSCCEEEEESSSSCCTHHHHHHTTSCCCEEECC--
T ss_pred CCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeeccc-CCcEEeeCCeEEeccCCCCCCHHHHHHHhhcCCceeecc--
Confidence 3459999997 5798 89999999999999999994 8999999999997311 012379999999 999652211
Q ss_pred CCCCCCcceEEE-eCCeEEECCCChhhhcccCCCCCHHHHHHHHHHhh--cCCCCCCCCcHHH--HHHHhhC---hHHHH
Q psy7666 156 SSHPTAQNRLIY-VNKKLHKLPSNFFSLFKTHSPFSKPLIFSILHDLT--TKTVPKSDESIYD--FVSRRFG---SEVAD 227 (350)
Q Consensus 156 ~~~p~~~~~~i~-~~g~~~~~p~~~~~~~~~~~~l~~~~~~~~l~~~~--~~~~~~~~~Sv~~--~l~~~~~---~~~~~ 227 (350)
.......++ .+|+.++.+. ....+.. ......+...+. .+....++.|+.+ ++.+... ....+
T Consensus 89 ---~~~~~~~~~~~~g~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~ 159 (472)
T 1b37_A 89 ---FDYLAQNVYKEDGGVYDEDY-VQKRIEL-----ADSVEEMGEKLSATLHASGRDDMSILAMQRLNEHQPNGPATPVD 159 (472)
T ss_dssp ---CTTGGGCEECSSSSBCCHHH-HHHHHHH-----HHHHHHHHHHHHHTSCTTCTTCCBHHHHHHHHHTSSSSCCSHHH
T ss_pred ---CccccceeEcCCCCCCCHHH-HHHHHHH-----HHHHHHHHHHHHHhhccccchhhhHHHHHHHhhhcccccccHHH
Confidence 111222333 3555432211 0001000 001111111111 1112345677764 4544331 12233
Q ss_pred HHHHHhhh-hcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcchhHHHHhhhcccceEEEecCcHH
Q psy7666 228 YAVSSMIC-GICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEESELYRRSRIEKWSVWSVEGGLQ 306 (350)
Q Consensus 228 ~~~~pl~~-~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~GG~~ 306 (350)
.++.+++. ..++.+++..|+...++. ..+. .. . ....+..+.||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~s~~~~~~~------------~~~~-~~-~-------------------~~~~~~~~~gG~~ 206 (472)
T 1b37_A 160 MVVDYYKFDYEFAEPPRVTSLQNTVPL------------ATFS-DF-G-------------------DDVYFVADQRGYE 206 (472)
T ss_dssp HHHHHHHTHHHHSSCGGGBBSTTTSSC------------HHHH-HH-C-------------------SEEEEECCTTCTT
T ss_pred HHHHHHHHhhhhcccccccchhhcccc------------cccc-cc-C-------------------CceeeeecCCcHH
Confidence 45555442 234556666654322110 0110 00 0 0111233489999
Q ss_pred HHHHHHHHhhc-C--------CCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 307 TIVNTLGEHLS-N--------KVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~-~--------g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
+|+++|++.+. . |++|+++++|++|.+++++|.|++.+|++++
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ 258 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYS 258 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEE
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEE
Confidence 99999999986 3 5789999999999999889999999997664
No 27
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.57 E-value=1.9e-14 Score=142.88 Aligned_cols=215 Identities=14% Similarity=0.208 Sum_probs=127.8
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCcceEEEec-CCCeEEecCCceecCCCCCchHHHHHHHHcCCCCcccccCCCC
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGGWVRSVQS-PEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSSH 158 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~-~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~~ 158 (350)
+++||+||+ ++|++|+|||+++++|||+.|.+. .+|+.+|+|+++++..++ .+.++++++|+......
T Consensus 42 G~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~g~~~~~~~----- 113 (498)
T 2iid_A 42 GMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHR---IVREYIRKFDLRLNEFS----- 113 (498)
T ss_dssp BHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCH---HHHHHHHHTTCCEEEEC-----
T ss_pred CHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHH---HHHHHHHHhCCCceeec-----
Confidence 349999997 569999999999999999999873 268999999999976554 89999999999643221
Q ss_pred CCCcceEEEeCCeEEECCCCh--hhhccc-CC----CCCHHHHH-----HHHHHhhcC-----CCCCCCCcHHHHHHHh-
Q psy7666 159 PTAQNRLIYVNKKLHKLPSNF--FSLFKT-HS----PFSKPLIF-----SILHDLTTK-----TVPKSDESIYDFVSRR- 220 (350)
Q Consensus 159 p~~~~~~i~~~g~~~~~p~~~--~~~~~~-~~----~l~~~~~~-----~~l~~~~~~-----~~~~~~~Sv~~~l~~~- 220 (350)
+.....+++.+|.....+.-. ...+.. +. .....++. +++.++... ....++.|+.+|+++.
T Consensus 114 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~ 193 (498)
T 2iid_A 114 QENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRTNCSYILNKYDTYSTKEYLIKEG 193 (498)
T ss_dssp SCCTTSEEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHHHHTHHHHHHHHHSCHHHHHHHHTTSBHHHHHHHTS
T ss_pred ccCCccEEEeCCeeecccccccCccccccCCCccccCCCHHHHHHHHHHHHHHHHhhccHHHHHHHhhhhhHHHHHHHcc
Confidence 122345666677644321100 000000 00 00111111 111111000 0113567899998864
Q ss_pred -hChHHHHHHHHHhhhhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHH-hhhcCCCCCCcchhHHHHhhhcccceE
Q psy7666 221 -FGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKE-MMSKRPDLSGYEESELYRRSRIEKWSV 298 (350)
Q Consensus 221 -~~~~~~~~~~~pl~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~-~~~~~~~~~~~~~~~~y~~~~~~~~~~ 298 (350)
++....+ ++..++.... ....+. ..++... .+ .....+
T Consensus 194 ~~~~~~~~-~~~~~~~~~~---~~~~~~-----------------~~~~~~~~~~-------------------~~~~~~ 233 (498)
T 2iid_A 194 DLSPGAVD-MIGDLLNEDS---GYYVSF-----------------IESLKHDDIF-------------------AYEKRF 233 (498)
T ss_dssp CCCHHHHH-HHHHHTTCGG---GTTSBH-----------------HHHHHHHHHH-------------------TTCCCE
T ss_pred CCCHHHHH-HHHHhcCccc---chhHHH-----------------HHHHHHHhcc-------------------ccCcce
Confidence 2333333 2222221100 000110 0111000 00 012246
Q ss_pred EEecCcHHHHHHHHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCCCce
Q psy7666 299 WSVEGGLQTIVNTLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQPIHQ 347 (350)
Q Consensus 299 ~~~~GG~~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~ 347 (350)
+++.||+++|+++|++.++ .+|++|++|++|.+++++|.|++.+|+.
T Consensus 234 ~~~~gG~~~l~~~l~~~l~--~~i~~~~~V~~I~~~~~~v~v~~~~~~~ 280 (498)
T 2iid_A 234 DEIVDGMDKLPTAMYRDIQ--DKVHFNAQVIKIQQNDQKVTVVYETLSK 280 (498)
T ss_dssp EEETTCTTHHHHHHHHHTG--GGEESSCEEEEEEECSSCEEEEEECSSS
T ss_pred EEeCCcHHHHHHHHHHhcc--cccccCCEEEEEEECCCeEEEEEecCCc
Confidence 7899999999999999996 4899999999999998899998887763
No 28
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.46 E-value=2.1e-13 Score=142.51 Aligned_cols=229 Identities=14% Similarity=0.199 Sum_probs=125.6
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCcc
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQV 151 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l 151 (350)
.+|+|| +||+||+ ++|++|+|+|+++++|||++|....+|+.+|+|++|+++.. .+.+..+++++|++...
T Consensus 337 ~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~~--~np~~~l~~~lGl~~~~ 414 (776)
T 4gut_A 337 KSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGCI--NNPVALMCEQLGISMHK 414 (776)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECCT--TCHHHHHHHHHTCCCEE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCCc--cChHHHHHHHhCCcccc
Confidence 455555 9999997 56999999999999999999987447999999999998754 34899999999996532
Q ss_pred cccCCCCCCCcceEEEeCCeEEECCCChhhhcccCCCCCHHHHHHHHHHhhcCCCCCCCCcHHHHHHHhhChHHHHHHHH
Q psy7666 152 IPITSSHPTAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFSILHDLTTKTVPKSDESIYDFVSRRFGSEVADYAVS 231 (350)
Q Consensus 152 ~~~~~~~p~~~~~~i~~~g~~~~~p~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~Sv~~~l~~~~~~~~~~~~~~ 231 (350)
.. ....++..+|... ......... .....+...+..+........+.++.+++.+.+.. ++.
T Consensus 415 ~~-------~~~~l~~~~g~~~--~~~~~~~~~----~~~~~ll~~~~~~~~~~~~~~d~sl~~~~~~~~~~-----~l~ 476 (776)
T 4gut_A 415 FG-------ERCDLIQEGGRIT--DPTIDKRMD----FHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKA-----FIK 476 (776)
T ss_dssp CC-------SCCCEECTTSCBC--CHHHHHHHH----HHHHHHHHHHHHHGGGCCGGGCCBHHHHHHHHHHH-----HHH
T ss_pred cc-------cccceEccCCccc--chhHHHHHH----HHHHHHHHHHHHHhhcccccccccHHHHHHHHHHH-----HHH
Confidence 21 1123333333321 000000000 00011112222222112223567788877653321 111
Q ss_pred HhhhhcccCCcccccHHHHHHHHHHHHHhccchHHHHHHHhhhcCCCCCCcch-hHHHHhhhcccceEEEecCcHHHHHH
Q psy7666 232 SMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGAIKEMMSKRPDLSGYEE-SELYRRSRIEKWSVWSVEGGLQTIVN 310 (350)
Q Consensus 232 pl~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~GG~~~L~~ 310 (350)
. .+.+...+....+...+...+...++.+..+ ... ..+ ...| .........+.+|++.+++
T Consensus 477 ~-----~gv~~~~l~~~~l~~~~~~l~~~~G~~l~~l--------s~~--~~~~~~~~---~~~~G~~~~~~~G~~~l~~ 538 (776)
T 4gut_A 477 E-----SGIQFSELEGQVLQFHLSNLEYACGSNLHQV--------SAR--SWDHNEFF---AQFAGDHTLLTPGYSVIIE 538 (776)
T ss_dssp H-----SCCCCCHHHHHHHHHHHHHHHHHHTSCTTSB--------BTT--TTTGGGGS---CCCCSCEEECTTCTHHHHH
T ss_pred h-----cCCCccchhHHHHHHHHHHHHHhcCCChHHc--------Chh--hhhhhhhH---HhcCCCeEEECChHHHHHH
Confidence 1 1112221111111000011111111100000 000 000 0000 0112345678999999999
Q ss_pred HHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 311 TLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 311 aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
+|++.+ +|++|++|++|++++++|+|++.+|++++
T Consensus 539 aLa~gl----~I~l~t~V~~I~~~~~~v~V~~~~G~~i~ 573 (776)
T 4gut_A 539 KLAEGL----DIQLKSPVQCIDYSGDEVQVTTTDGTGYS 573 (776)
T ss_dssp HHHTTS----CEESSCCEEEEECSSSSEEEEETTCCEEE
T ss_pred HHHhCC----cEEcCCeeEEEEEcCCEEEEEECCCcEEE
Confidence 998754 79999999999999889999999997664
No 29
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.41 E-value=1.4e-12 Score=137.22 Aligned_cols=68 Identities=19% Similarity=0.311 Sum_probs=58.1
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCC
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLAD 149 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~ 149 (350)
++|+|| +||+||+ ++|++|+|||+++++|||+.|++ ..|+.+|+|++|+++.. ++.+..+.+++|+..
T Consensus 279 ~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~~~~~~~G~~~~~~~~--~~~~~~l~~~lg~~~ 353 (852)
T 2xag_A 279 GKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFR-KGNYVADLGAMVVTGLG--GNPMAVVSKQVNMEL 353 (852)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEE-ETTEEEESSCCEECCSB--TCHHHHHHHHTTCCE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeec-ccccchhcCceEecCCC--CchHHHHHHHhCCch
Confidence 456665 9999998 68999999999999999999999 48999999999997642 347889999999853
No 30
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.39 E-value=2.5e-12 Score=132.58 Aligned_cols=68 Identities=19% Similarity=0.311 Sum_probs=58.0
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCC
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLAD 149 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~ 149 (350)
++|+|| +||+||+ ++|++|+|||+++++||++.|++ ..|+.+|+|++|+++.. ++.+..+.+++|++.
T Consensus 108 ~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~-~~~~~~~~G~~~~~~~~--~~~~~~l~~~l~~~~ 182 (662)
T 2z3y_A 108 GKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFR-KGNYVADLGAMVVTGLG--GNPMAVVSKQVNMEL 182 (662)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEE-ETTEEEESSCCEECCSB--TCHHHHHHHHHTCCE
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccc-ccCchhhcCcEEEeCCC--CchHHHHHHHhCcch
Confidence 556665 9999997 68999999999999999999999 48999999999997642 347889999999853
No 31
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.37 E-value=3.2e-12 Score=131.70 Aligned_cols=68 Identities=15% Similarity=0.230 Sum_probs=57.6
Q ss_pred ceeehh----hHhHhhh---cCC--------CCEEEEecCC-CC----------------CcceEEEecC------CCeE
Q psy7666 79 LLLLVI----RILCTVL---RIS--------TPITLLESSS-RL----------------GGWVRSVQSP------EGLI 120 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G--------~~VtVlEa~d-rv----------------GGRi~T~~~~------~G~~ 120 (350)
++|+|| |||+||+ ++| ++|+|||+++ |+ |||+.|.+.. +++.
T Consensus 57 ~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~~~~~~~~~~~ 136 (721)
T 3ayj_A 57 YRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAALVHNGDPASGDTI 136 (721)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEEEECSSCGGGCSEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCcccccccchhhHHHhcCcCCceEEEEEccCCcccCCCcE
Confidence 456554 9999997 457 9999999999 99 9999999752 4689
Q ss_pred EecCCceecCCCCCchHHHHHHHHc-CCCC
Q psy7666 121 FEKGPRTIRPKGRLGANTLKLVEDL-GLAD 149 (350)
Q Consensus 121 ~D~Ga~~~~~~~~~~~~l~~l~~el-Gl~~ 149 (350)
+|+|+++|.+.++ .++++++++ |+++
T Consensus 137 ~e~G~~~~~~~~~---~~~~~~~~l~gl~~ 163 (721)
T 3ayj_A 137 YEVGAMRFPEIAG---LTWHYASAAFGDAA 163 (721)
T ss_dssp EECSCCCEETTCH---HHHHHHHHHHCTTC
T ss_pred EecCCEEecCccH---HHHHHHHHhcCCcc
Confidence 9999999987765 899999999 9963
No 32
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.34 E-value=4.4e-11 Score=121.77 Aligned_cols=191 Identities=7% Similarity=0.012 Sum_probs=119.8
Q ss_pred CeEEecCCceecCCCCCchHHHHHHHHcCCCCcccccCCCCCCCcceEEEeCCeEEECCCChhhhcccCCCCCHHHHHHH
Q psy7666 118 GLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVIPITSSHPTAQNRLIYVNKKLHKLPSNFFSLFKTHSPFSKPLIFSI 197 (350)
Q Consensus 118 G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~~~~~~~p~~~~~~i~~~g~~~~~p~~~~~~~~~~~~l~~~~~~~~ 197 (350)
+|.||+||++++... .+.+++.++|+...+.+.. . ...|++.+|+.+.+|.+..++++. +.+...++.++
T Consensus 223 ~f~~DL~PklL~~~g----~lv~LL~~sgV~~yLEFk~----v-~~~y~~~~G~~~~VPas~~eif~s-~~Lsl~EKr~L 292 (650)
T 1vg0_A 223 RFNIDLVSKLLYSRG----LLIDLLIKSNVSRYAEFKN----I-TRILAFREGTVEQVPCSRADVFNS-KQLTMVEKRML 292 (650)
T ss_dssp GCCEESSCCCEESSS----HHHHHHHHHTGGGGCCEEE----C-CEEEEESSSSEEECCCSHHHHHHC-SSSCHHHHHHH
T ss_pred CeEEeeCCeeeeCCc----HHHHHHHHcCCcceeeEEE----c-cceEEecCCCEeECCCCHHHHHhC-cCCCHHHHHHH
Confidence 567888999887654 7999999999866544421 1 246777888888999987777775 56655443333
Q ss_pred ---HHHhhc---C---CCCCCCCcHHHHHHHhhChHHHHHHHHHhhhhcccCCcccccHHHHHHHHHHHHHhccchHHHH
Q psy7666 198 ---LHDLTT---K---TVPKSDESIYDFVSRRFGSEVADYAVSSMICGICAGDAKKISVNFLMAKLFELEQLHGGVIKGA 268 (350)
Q Consensus 198 ---l~~~~~---~---~~~~~~~Sv~~~l~~~~~~~~~~~~~~pl~~~~~~~~~~~lS~~~~l~~~~~~~~~~gs~l~g~ 268 (350)
+..... . +...+..|+.+|+++.+.......++...+ ++++.+ ..++...+..+..+
T Consensus 293 ~kFl~~~~~~~~~p~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~~l-al~~~~--~~pa~~~l~~i~~~----------- 358 (650)
T 1vg0_A 293 MKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSI-AMTSET--TSCTVDGLKATKKF----------- 358 (650)
T ss_dssp HHHHHHHHTGGGCHHHHHTTTTSBHHHHHTTSSSCHHHHHHHHHHT-TC--CC--SCBHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHhccChHHHhhhccCCHHHHHHHhCCCHHHHHHHHHHH-hccCCC--CCchhHHHHHHHHH-----------
Confidence 222111 0 124568899999998644444444443222 333222 12332222211110
Q ss_pred HHHhhhcCCCCCCcchhHHHHhhhcccceEEEecCcHHHHHHHHHHhhc-CCCEEEeCcceeEEEEeC--CeE-EEEeCC
Q psy7666 269 IKEMMSKRPDLSGYEESELYRRSRIEKWSVWSVEGGLQTIVNTLGEHLS-NKVEVKMDTTCTNLEFLE--KGV-KAVDQP 344 (350)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~GG~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~--~gv-~V~~~~ 344 (350)
...+ .. ....+++++.||++.|+++|++.+. .|++|+++++|++|..++ +++ .|...+
T Consensus 359 l~sl-~~-----------------yg~sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~ 420 (650)
T 1vg0_A 359 LQCL-GR-----------------YGNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQF 420 (650)
T ss_dssp HHHT-TS-----------------SSSSSEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETT
T ss_pred HHHH-Hh-----------------hccCceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCC
Confidence 0000 00 0112578999999999999999998 899999999999999887 544 455677
Q ss_pred CceecC
Q psy7666 345 IHQMTK 350 (350)
Q Consensus 345 G~~~~~ 350 (350)
|+++++
T Consensus 421 Ge~i~A 426 (650)
T 1vg0_A 421 GQRIIS 426 (650)
T ss_dssp SCEEEC
T ss_pred CCEEEc
Confidence 887753
No 33
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.51 E-value=9.3e-08 Score=84.11 Aligned_cols=58 Identities=17% Similarity=0.237 Sum_probs=48.1
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHH
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVED 144 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~e 144 (350)
++|||+||+ ++|++|+|||+++++|||+.+.+ ..+..+|.|++++..... .+......
T Consensus 11 GpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~-~~~~~~d~g~~~~~~~~~---~~~~~~~~ 71 (336)
T 3kkj_A 11 GIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGAQYFTARDR---RFATAVKQ 71 (336)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSCCCBCCCSH---HHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccc-cCCceeecCccccccCcH---HHHHHHHH
Confidence 349999998 68999999999999999999999 489999999999976653 44444443
No 34
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.47 E-value=3.1e-07 Score=86.25 Aligned_cols=49 Identities=12% Similarity=0.141 Sum_probs=43.8
Q ss_pred EEEecCcHHHHHHHHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCCCcee
Q psy7666 298 VWSVEGGLQTIVNTLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQPIHQM 348 (350)
Q Consensus 298 ~~~~~GG~~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~ 348 (350)
.+...+|+++++++|++.+ |++|+++++|++|++++++|.|++.+|+++
T Consensus 104 ~~~~~~g~~~l~~~l~~~~--g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~ 152 (342)
T 3qj4_A 104 NFVAPQGISSIIKHYLKES--GAEVYFRHRVTQINLRDDKWEVSKQTGSPE 152 (342)
T ss_dssp EEECTTCTTHHHHHHHHHH--TCEEESSCCEEEEEECSSSEEEEESSSCCE
T ss_pred ceecCCCHHHHHHHHHHhc--CCEEEeCCEEEEEEEcCCEEEEEECCCCEE
Confidence 4667899999999999988 489999999999999988999999988754
No 35
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.64 E-value=5e-05 Score=70.38 Aligned_cols=61 Identities=16% Similarity=0.209 Sum_probs=51.4
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcC
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLG 146 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elG 146 (350)
++++||++|+ ++|.+|+|+|+++.+||++.+.. ..+..+|.|++++....+ .+.++++++.
T Consensus 10 aG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 73 (336)
T 1yvv_A 10 TGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGAQYFTARDR---RFATAVKQWQ 73 (336)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSCCCBCCCSH---HHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEe-cCCCeEecCCCeEecCCH---HHHHHHHHHH
Confidence 3449999987 67999999999999999999988 488999999999876654 6777777654
No 36
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=95.61 E-value=0.0048 Score=57.11 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=27.9
Q ss_pred ceeehh----hHhHhhh-----cCCCCEEEEecCCCCCcceE
Q psy7666 79 LLLLVI----RILCTVL-----RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 79 ~~v~vi----aGLaaA~-----~~G~~VtVlEa~drvGGRi~ 111 (350)
.+|+|| |||+||+ ++|++|+|+|+.+.+||.+.
T Consensus 66 ~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEE
Confidence 347777 9999996 35999999999999999875
No 37
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=94.63 E-value=0.015 Score=56.75 Aligned_cols=32 Identities=22% Similarity=0.281 Sum_probs=27.8
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcce
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWV 110 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi 110 (350)
++|+|| |||+||. ++|++|+|+|+.+++||..
T Consensus 123 ~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l 161 (456)
T 2vdc_G 123 LSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLL 161 (456)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCee
Confidence 567777 9999997 5699999999999999974
No 38
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=93.75 E-value=0.03 Score=52.21 Aligned_cols=27 Identities=7% Similarity=-0.017 Sum_probs=22.7
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCCCc
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRLGG 108 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drvGG 108 (350)
+++|||+||+ ++|++|+|+|+++.+|.
T Consensus 12 aGpaGl~~A~~La~~G~~V~v~Er~~~~~~ 41 (397)
T 3oz2_A 12 GGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred cCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 3449999997 78999999999887764
No 39
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=93.57 E-value=0.033 Score=51.93 Aligned_cols=48 Identities=6% Similarity=0.056 Sum_probs=39.5
Q ss_pred EEEecCc---HHHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCC
Q psy7666 298 VWSVEGG---LQTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPI 345 (350)
Q Consensus 298 ~~~~~GG---~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G 345 (350)
.+.+.+| ...++++|++.+. .|++|+++++|++|..++++|.|++.+|
T Consensus 143 ~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g 194 (381)
T 3nyc_A 143 TYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG 194 (381)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE
T ss_pred EEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC
Confidence 3444444 3568888988887 8999999999999999988999998887
No 40
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=93.51 E-value=0.028 Score=57.72 Aligned_cols=34 Identities=26% Similarity=0.262 Sum_probs=29.3
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRS 112 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T 112 (350)
++|+|| |||+||. ++|++|+|+|+++++||.+..
T Consensus 392 ~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 392 ARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 567776 9999997 569999999999999998764
No 41
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=93.45 E-value=0.029 Score=51.14 Aligned_cols=34 Identities=24% Similarity=0.341 Sum_probs=28.4
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRS 112 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T 112 (350)
.+|+|| |||+||. +.|++|+|+|+++.+||....
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~ 48 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA 48 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh
Confidence 345555 9999997 679999999999999999854
No 42
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=93.41 E-value=0.039 Score=50.24 Aligned_cols=32 Identities=16% Similarity=0.250 Sum_probs=26.0
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEE
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWVRS 112 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T 112 (350)
.|+|| |||+||. ++|++|+|+|+ +.+||.+..
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~~~ 46 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMAN 46 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGGGG
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCeeec
Confidence 36666 9999997 67999999997 578998743
No 43
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.33 E-value=0.031 Score=51.07 Aligned_cols=34 Identities=18% Similarity=0.201 Sum_probs=27.9
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEec----CCCCCcceEE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLES----SSRLGGWVRS 112 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa----~drvGGRi~T 112 (350)
++|+|| +||+||. ++|++|+|+|+ ++++||.+..
T Consensus 23 ~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~ 67 (338)
T 3itj_A 23 NKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTT 67 (338)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCccccc
Confidence 456666 9999997 67999999999 5589998765
No 44
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=93.09 E-value=0.045 Score=56.59 Aligned_cols=34 Identities=12% Similarity=0.227 Sum_probs=29.3
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRS 112 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T 112 (350)
++|+|| |||+||. +.|++|+|+|+++++||.+..
T Consensus 390 ~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 390 DSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 567777 9999997 579999999999999998754
No 45
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=92.70 E-value=0.054 Score=53.01 Aligned_cols=37 Identities=16% Similarity=0.228 Sum_probs=29.5
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeC
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQ 343 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~ 343 (350)
.+.+.+.+.+. .|++|+++++|++|..+++++.|+..
T Consensus 240 ~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~ 277 (491)
T 3urh_A 240 EVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFE 277 (491)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEE
Confidence 35666666776 78999999999999998888776654
No 46
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=92.69 E-value=0.056 Score=49.91 Aligned_cols=42 Identities=5% Similarity=-0.034 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCe-EEEEeCCCc
Q psy7666 305 LQTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG-VKAVDQPIH 346 (350)
Q Consensus 305 ~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g-v~V~~~~G~ 346 (350)
...+.++|++.+. .|++|+++++|++|..++++ +.|++.+|+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~ 192 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAE 192 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTS
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCc
Confidence 4568888888888 89999999999999998776 889888883
No 47
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=92.69 E-value=0.062 Score=51.85 Aligned_cols=34 Identities=24% Similarity=0.203 Sum_probs=27.8
Q ss_pred ceeehh----hHhHhhh---cCCC--CEEEEecCCCCCcceEE
Q psy7666 79 LLLLVI----RILCTVL---RIST--PITLLESSSRLGGWVRS 112 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~--~VtVlEa~drvGGRi~T 112 (350)
++|+|| +||+||. +.|. +|+|||+++.+||....
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 456666 9999987 5798 99999999999996543
No 48
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=92.56 E-value=0.075 Score=54.47 Aligned_cols=43 Identities=7% Similarity=0.008 Sum_probs=36.9
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCc-ee
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIH-QM 348 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~-~~ 348 (350)
..++++|.+.+. .|++|+++++|++|..++++|.|.+.+|+ ++
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i 456 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAK 456 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEE
Confidence 668888988887 89999999999999999888999998886 44
No 49
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.54 E-value=0.046 Score=49.37 Aligned_cols=33 Identities=27% Similarity=0.238 Sum_probs=27.0
Q ss_pred ceeehh----hHhHhhh---cCCCCEEE-EecCCCCCcceEE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITL-LESSSRLGGWVRS 112 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtV-lEa~drvGGRi~T 112 (350)
++|+|| |||+||. ++|++|+| +|+ +.+||.+..
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 456666 9999997 56999999 999 889998654
No 50
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=92.49 E-value=0.049 Score=49.88 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=28.1
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRS 112 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T 112 (350)
.+|+|| |||+||. +.|++|+|+|+++.+||.+..
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 46 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTA 46 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeec
Confidence 345555 9999987 579999999999999998754
No 51
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=92.45 E-value=0.057 Score=51.21 Aligned_cols=29 Identities=14% Similarity=0.188 Sum_probs=22.9
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCC
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLG 107 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvG 107 (350)
.+|+|| +||++|+ ++|++|+|+|+.+.++
T Consensus 24 ~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~ 59 (407)
T 3rp8_A 24 MKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIK 59 (407)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 446555 9999997 6899999999987653
No 52
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=92.34 E-value=0.051 Score=52.34 Aligned_cols=32 Identities=6% Similarity=0.171 Sum_probs=25.6
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcce
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWV 110 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi 110 (350)
.+|+|| |||+||. ++|++|+|+|+.+.+||++
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~ 66 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKI 66 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCcee
Confidence 345555 9999987 6799999999999986643
No 53
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=92.16 E-value=0.057 Score=52.52 Aligned_cols=39 Identities=23% Similarity=0.297 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhcCCCEEEeCcceeEEEEeC-CeEEEEeC--CCc
Q psy7666 306 QTIVNTLGEHLSNKVEVKMDTTCTNLEFLE-KGVKAVDQ--PIH 346 (350)
Q Consensus 306 ~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~-~gv~V~~~--~G~ 346 (350)
..+.+.+.+.+. ++|+++++|++|..++ +++.|+.. +|+
T Consensus 214 ~~~~~~l~~~l~--v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~ 255 (466)
T 3l8k_A 214 QDIVNTLLSILK--LNIKFNSPVTEVKKIKDDEYEVIYSTKDGS 255 (466)
T ss_dssp HHHHHHHHHHHC--CCEECSCCEEEEEEEETTEEEEEECCTTSC
T ss_pred HHHHHHHHhcCE--EEEEECCEEEEEEEcCCCcEEEEEEecCCc
Confidence 346666666664 7999999999999887 78888877 565
No 54
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=92.01 E-value=0.042 Score=54.91 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=34.6
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCc
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPR 126 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~ 126 (350)
.+|+|| |||++|. ++|++|+|+|+++.+||.....++ .|..+|.-.+
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~y-pg~~~dv~s~ 75 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRY-PGARCDVESI 75 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCC-TTCBCSSCTT
T ss_pred CCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCC-CCceeCCCch
Confidence 346655 9999987 579999999999999997764442 4555555443
No 55
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=91.83 E-value=0.063 Score=49.86 Aligned_cols=34 Identities=21% Similarity=0.268 Sum_probs=28.3
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRS 112 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T 112 (350)
.+|+|| +||+||. ++|++|+|+|+.+.+||.+..
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~ 55 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAA 55 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccc
Confidence 346655 9999987 579999999999999998754
No 56
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=91.82 E-value=0.093 Score=51.88 Aligned_cols=42 Identities=14% Similarity=0.148 Sum_probs=33.3
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCe----EEEEeCCCc-ee
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG----VKAVDQPIH-QM 348 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g----v~V~~~~G~-~~ 348 (350)
.+.+.+.+.+. .|++|+++++|++|..++++ +.|++.+|+ ++
T Consensus 256 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i 303 (523)
T 1mo9_A 256 ETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRI 303 (523)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEE
Confidence 35667777777 78999999999999986665 788888886 44
No 57
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=91.80 E-value=0.082 Score=48.44 Aligned_cols=29 Identities=17% Similarity=0.165 Sum_probs=25.3
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCCcceEE
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLGGWVRS 112 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvGGRi~T 112 (350)
++||++|. ++|++|+|+|+++.+||....
T Consensus 13 ~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~ 44 (357)
T 4a9w_A 13 QSGLSAGYFLRRSGLSYVILDAEASPGGAWQH 44 (357)
T ss_dssp HHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCcccC
Confidence 39999987 679999999999999998653
No 58
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=91.75 E-value=0.084 Score=51.38 Aligned_cols=34 Identities=9% Similarity=0.139 Sum_probs=28.0
Q ss_pred ceeehh----hHhHhhh---c---CCCC---EEEEecCCCCCcceEE
Q psy7666 79 LLLLVI----RILCTVL---R---ISTP---ITLLESSSRLGGWVRS 112 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~---~G~~---VtVlEa~drvGGRi~T 112 (350)
++|+|| |||+||. + .|++ |+|+|+++.+||.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 346655 9999986 5 8999 9999999999998654
No 59
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=91.72 E-value=0.082 Score=52.08 Aligned_cols=35 Identities=20% Similarity=0.133 Sum_probs=28.5
Q ss_pred CcHHHHHHHHHHhhc-CCCEEEeCcceeEEEEe-CCe
Q psy7666 303 GGLQTIVNTLGEHLS-NKVEVKMDTTCTNLEFL-EKG 337 (350)
Q Consensus 303 GG~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~-~~g 337 (350)
+|...+.+.|.+.+. .|++|+++++|++|..+ +++
T Consensus 199 ~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~ 235 (510)
T 4at0_A 199 GGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGR 235 (510)
T ss_dssp CTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCc
Confidence 344478888888887 88999999999999998 443
No 60
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=91.67 E-value=0.078 Score=49.75 Aligned_cols=28 Identities=18% Similarity=0.237 Sum_probs=22.4
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCC
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRL 106 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drv 106 (350)
++|+|| +||++|+ ++|++|+|||+++.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 455554 9999997 789999999997654
No 61
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.61 E-value=0.11 Score=53.05 Aligned_cols=44 Identities=9% Similarity=-0.056 Sum_probs=38.6
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
..++++|.+.+. .|++|+++++|++|..++++|.|++.+|.+++
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~ 461 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQAT 461 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEE
Confidence 668888888887 78999999999999999999999998876654
No 62
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=91.59 E-value=0.072 Score=52.06 Aligned_cols=42 Identities=10% Similarity=0.152 Sum_probs=34.3
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
+.+.+.+.+. .|++|+++++|++|+.+++++.|++.+|+++.
T Consensus 234 ~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ 276 (484)
T 3o0h_A 234 LRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTIC 276 (484)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEE
Confidence 5556666666 68999999999999998888999998887653
No 63
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.49 E-value=0.12 Score=49.38 Aligned_cols=45 Identities=18% Similarity=0.099 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhhc-CCCEEEeCc---ceeEEEEeCCeEE-EEeCCCceec
Q psy7666 305 LQTIVNTLGEHLS-NKVEVKMDT---TCTNLEFLEKGVK-AVDQPIHQMT 349 (350)
Q Consensus 305 ~~~L~~aLa~~L~-~g~~I~l~~---~V~~I~~~~~gv~-V~~~~G~~~~ 349 (350)
...+.++|++.+. .|++|++++ +|++|..++++|. |++.+|++++
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~ 209 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWR 209 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEE
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEE
Confidence 4668888888887 899999999 9999999988887 9999997654
No 64
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=91.46 E-value=0.097 Score=48.83 Aligned_cols=40 Identities=8% Similarity=-0.100 Sum_probs=31.6
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCC
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPI 345 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G 345 (350)
..+.+.|.+.+. .|++|+++++|++|..++++|.|++.+|
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g 204 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG 204 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc
Confidence 457777777777 7888999999999988777777777666
No 65
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=91.41 E-value=0.11 Score=49.04 Aligned_cols=31 Identities=10% Similarity=0.020 Sum_probs=24.4
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcc
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGW 109 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGR 109 (350)
.+|+|| +||++|. ++|++|+|+|+++.++++
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~ 64 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR 64 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc
Confidence 345554 9999987 679999999999876554
No 66
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=91.28 E-value=0.093 Score=52.45 Aligned_cols=27 Identities=15% Similarity=0.229 Sum_probs=23.6
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCCcce
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLGGWV 110 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvGGRi 110 (350)
+|||+||+ ++|++|+|+|+.+.+||..
T Consensus 136 ~aGl~aA~~la~~G~~V~vlEk~~~~gg~s 165 (571)
T 1y0p_A 136 GAGFSAAISATDSGAKVILIEKEPVIGGNA 165 (571)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred HHHHHHHHHHHHCCCcEEEEeCCCCCCCch
Confidence 39999997 5799999999999998863
No 67
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=91.28 E-value=0.095 Score=47.34 Aligned_cols=32 Identities=13% Similarity=0.256 Sum_probs=26.1
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRS 112 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T 112 (350)
.+|+|| |||+||. ++|++|+|+|++ +||.+..
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~ 54 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE 54 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc
Confidence 356665 9999997 579999999998 9998654
No 68
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=91.18 E-value=0.49 Score=45.05 Aligned_cols=30 Identities=17% Similarity=0.006 Sum_probs=24.6
Q ss_pred ehhhHhHhhh---cCCC-CEEEEecCCCCCcceE
Q psy7666 82 LVIRILCTVL---RIST-PITLLESSSRLGGWVR 111 (350)
Q Consensus 82 ~viaGLaaA~---~~G~-~VtVlEa~drvGGRi~ 111 (350)
++++||+||+ ++|+ +|+|+|+.+..||...
T Consensus 14 gG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~~~ 47 (438)
T 3dje_A 14 AGTWGTSTALHLARRGYTNVTVLDPYPVPSAISA 47 (438)
T ss_dssp CSHHHHHHHHHHHHTTCCCEEEEESSCSSCTTCT
T ss_pred CCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcc
Confidence 3459999998 6799 9999999998887643
No 69
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=91.15 E-value=0.087 Score=51.08 Aligned_cols=40 Identities=8% Similarity=0.040 Sum_probs=32.4
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCe-EEEE-eCCCc
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG-VKAV-DQPIH 346 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g-v~V~-~~~G~ 346 (350)
.+.+.+.+.+. .|++|+++++|++|+.++++ +.|+ +.+|+
T Consensus 212 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~ 254 (463)
T 4dna_A 212 DMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE 254 (463)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE
T ss_pred HHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe
Confidence 36667777777 78999999999999987665 6788 77776
No 70
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=91.12 E-value=0.23 Score=46.91 Aligned_cols=48 Identities=17% Similarity=0.276 Sum_probs=32.9
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCC-CcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCC
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRL-GGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLAD 149 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drv-GGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~ 149 (350)
+++||++|. ++|++|+|+|+++.. .++. .|. .+ .+ ...++++++|+.+
T Consensus 14 G~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~------~g~-------~l---~~---~~~~~l~~~g~~~ 65 (397)
T 2vou_A 14 SISGLTAALMLRDAGVDVDVYERSPQPLSGFG------TGI-------VV---QP---ELVHYLLEQGVEL 65 (397)
T ss_dssp SHHHHHHHHHHHHTTCEEEEECSSSSSCCCCS------CEE-------EC---CH---HHHHHHHHTTCCG
T ss_pred CHHHHHHHHHHHhCCCCEEEEecCCCCCCccc------ccc-------cc---Ch---hHHHHHHHcCCcc
Confidence 349999997 689999999998763 1111 111 11 22 6789999999865
No 71
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=91.01 E-value=0.099 Score=47.28 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=24.8
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCC----CCCcceEE
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSS----RLGGWVRS 112 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~d----rvGGRi~T 112 (350)
+|+|| |||+||. ++|++|+|+|+.. .+||++.+
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~ 49 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTT 49 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGG
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCC
Confidence 46666 9999997 6899999999865 35555543
No 72
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=90.92 E-value=0.094 Score=50.88 Aligned_cols=38 Identities=16% Similarity=0.024 Sum_probs=28.7
Q ss_pred HHHHHHHhh-c-CCCEEEeCcceeEEEEeCCeEEEEeC--CC
Q psy7666 308 IVNTLGEHL-S-NKVEVKMDTTCTNLEFLEKGVKAVDQ--PI 345 (350)
Q Consensus 308 L~~aLa~~L-~-~g~~I~l~~~V~~I~~~~~gv~V~~~--~G 345 (350)
+.+.+.+.+ . .|++|+++++|++|+.+++++.|+.. +|
T Consensus 217 ~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g 258 (468)
T 2qae_A 217 VTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNG 258 (468)
T ss_dssp HHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC--
T ss_pred HHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCC
Confidence 556677777 6 78999999999999987766777654 55
No 73
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=90.84 E-value=0.14 Score=52.30 Aligned_cols=33 Identities=24% Similarity=0.332 Sum_probs=28.2
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
++|+|| |||+||. ++|++|+|+|+++.+||...
T Consensus 374 ~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 374 KNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 567776 9999987 57999999999999999854
No 74
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=90.76 E-value=0.31 Score=44.34 Aligned_cols=47 Identities=15% Similarity=0.179 Sum_probs=40.7
Q ss_pred EEEecCcHHHHHHHHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCCCcee
Q psy7666 298 VWSVEGGLQTIVNTLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQPIHQM 348 (350)
Q Consensus 298 ~~~~~GG~~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~ 348 (350)
.+....|++.+.+++++. .+|+++++|++|+.++++|.|++.+|++.
T Consensus 102 ~~~~~~~~~~l~~~l~~g----~~i~~~~~v~~i~~~~~~~~v~~~~g~~~ 148 (336)
T 1yvv_A 102 RWVGKPGMSAITRAMRGD----MPVSFSCRITEVFRGEEHWNLLDAEGQNH 148 (336)
T ss_dssp EEEESSCTHHHHHHHHTT----CCEECSCCEEEEEECSSCEEEEETTSCEE
T ss_pred cEEcCccHHHHHHHHHcc----CcEEecCEEEEEEEeCCEEEEEeCCCcCc
Confidence 456778999999999873 58999999999999999999999998764
No 75
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=90.73 E-value=0.094 Score=50.10 Aligned_cols=25 Identities=12% Similarity=0.357 Sum_probs=21.7
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCCc
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLGG 108 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvGG 108 (350)
++||+||. ++|.+|+|+|+.+.+|+
T Consensus 14 ~aGl~aA~~la~~G~~V~vlEk~~~~g~ 41 (401)
T 2gqf_A 14 AAGLFCAAQLAKLGKSVTVFDNGKKIGR 41 (401)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSSSSCH
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCCch
Confidence 49999987 57999999999998854
No 76
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=90.64 E-value=0.12 Score=47.04 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=26.9
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRS 112 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T 112 (350)
.+|+|| |||+||. +.|++|+|+|+. .+||.+..
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 48 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW 48 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc
Confidence 346655 9999987 579999999998 79998764
No 77
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=90.59 E-value=0.14 Score=46.31 Aligned_cols=27 Identities=19% Similarity=0.244 Sum_probs=23.1
Q ss_pred hhHhHhhh---cC-CCCEEEEecCCCCCcce
Q psy7666 84 IRILCTVL---RI-STPITLLESSSRLGGWV 110 (350)
Q Consensus 84 iaGLaaA~---~~-G~~VtVlEa~drvGGRi 110 (350)
++||+||+ +. |.+|+|+|+.+.+||.+
T Consensus 49 ~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 49 SAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp HHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred HHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 39999987 55 99999999999998753
No 78
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=90.53 E-value=0.13 Score=50.96 Aligned_cols=34 Identities=18% Similarity=0.330 Sum_probs=27.7
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRS 112 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T 112 (350)
.+|+|| +||++|. ++|++|+|+|+++.+||....
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~ 57 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYW 57 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc
Confidence 345555 9999987 579999999999999997653
No 79
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=90.53 E-value=0.13 Score=46.71 Aligned_cols=32 Identities=13% Similarity=0.315 Sum_probs=25.9
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEE
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWVRS 112 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T 112 (350)
+|+|| +||+||. ++|++|+|+|+ +.+||.+..
T Consensus 18 dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~ 56 (319)
T 3cty_A 18 DVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAE 56 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGG
T ss_pred cEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccc
Confidence 45555 9999987 57999999999 678998754
No 80
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=90.45 E-value=0.12 Score=55.40 Aligned_cols=32 Identities=19% Similarity=0.346 Sum_probs=27.6
Q ss_pred ceeehh----hHhHhhh---cCCC-CEEEEecCCCCCcce
Q psy7666 79 LLLLVI----RILCTVL---RIST-PITLLESSSRLGGWV 110 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~-~VtVlEa~drvGGRi 110 (350)
++|+|| |||+||. ++|+ +|+|+|+.+++||..
T Consensus 188 ~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 188 AKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 567777 9999997 6799 799999999999974
No 81
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=90.40 E-value=0.13 Score=48.00 Aligned_cols=27 Identities=7% Similarity=-0.017 Sum_probs=22.7
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCCCc
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRLGG 108 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drvGG 108 (350)
++++||++|+ ++|++|+|+|+.+.+|+
T Consensus 12 ~G~aGl~~A~~La~~G~~V~l~E~~~~~g~ 41 (397)
T 3cgv_A 12 GGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred cCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 3449999997 67999999999987766
No 82
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.13 E-value=0.44 Score=48.49 Aligned_cols=32 Identities=16% Similarity=-0.070 Sum_probs=25.7
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcce
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWV 110 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi 110 (350)
.+|+|| +||+||+ ++|++|+|+|+.+.+|+..
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~ga 311 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGA 311 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCST
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccC
Confidence 345555 9999997 6799999999998888543
No 83
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=90.07 E-value=0.12 Score=50.13 Aligned_cols=35 Identities=17% Similarity=0.210 Sum_probs=27.7
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCe-EEEEe
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG-VKAVD 342 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g-v~V~~ 342 (350)
+.+.+.+.+. .|++|+++++|++|..++++ +.|+.
T Consensus 222 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~ 258 (474)
T 1zmd_A 222 ISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSI 258 (474)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEE
T ss_pred HHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEE
Confidence 5566666776 78999999999999987766 77763
No 84
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=90.05 E-value=0.11 Score=51.87 Aligned_cols=30 Identities=20% Similarity=0.316 Sum_probs=25.0
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcc
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGW 109 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGR 109 (350)
+|+|| +||+||+ ++|.+|+|+|+.+.+||.
T Consensus 123 DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~ 159 (566)
T 1qo8_A 123 QVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGN 159 (566)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 35555 9999997 569999999999998875
No 85
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=90.02 E-value=0.1 Score=51.89 Aligned_cols=44 Identities=14% Similarity=0.076 Sum_probs=32.7
Q ss_pred eeehh----hHhHhhh----cCCCCEEEEecCCCCCcceEEEecCCCeEEecC
Q psy7666 80 LLLVI----RILCTVL----RISTPITLLESSSRLGGWVRSVQSPEGLIFEKG 124 (350)
Q Consensus 80 ~v~vi----aGLaaA~----~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~G 124 (350)
+|+|| |||++|. ++|++|+|+|+++.+||......+ .|...|.-
T Consensus 10 dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~y-pg~~~d~~ 61 (540)
T 3gwf_A 10 DAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRY-PGALSDTE 61 (540)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCC-TTCEEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCC-CCceecCC
Confidence 45555 9999986 469999999999999997665442 46555554
No 86
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=89.98 E-value=0.13 Score=49.90 Aligned_cols=37 Identities=19% Similarity=0.279 Sum_probs=28.1
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeC
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQ 343 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~ 343 (350)
.+.+.+.+.+. .|++|+++++|++|..+++++.|+..
T Consensus 219 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~ 256 (470)
T 1dxl_A 219 EIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVE 256 (470)
T ss_dssp HHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEE
Confidence 35566666676 78999999999999877666666643
No 87
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=89.71 E-value=0.16 Score=49.10 Aligned_cols=43 Identities=7% Similarity=0.059 Sum_probs=34.3
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
.+.+.+.+.+. .|++|+++++|++|+.+++++.|++.+|+++.
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ 252 (455)
T 2yqu_A 209 EVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLE 252 (455)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEE
Confidence 45666666666 68999999999999998888888887776653
No 88
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=89.68 E-value=0.14 Score=49.36 Aligned_cols=26 Identities=19% Similarity=0.256 Sum_probs=22.4
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCCcc
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLGGW 109 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvGGR 109 (350)
++||+||. ++|.+|+|+|+.+.+|+.
T Consensus 36 ~aGl~aA~~la~~G~~V~llEk~~~~g~~ 64 (447)
T 2i0z_A 36 PSGLMAAIGAAEEGANVLLLDKGNKLGRK 64 (447)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSSSSCHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCce
Confidence 39999987 579999999999988754
No 89
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=89.60 E-value=0.11 Score=51.83 Aligned_cols=28 Identities=11% Similarity=0.042 Sum_probs=23.8
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
++||+||+ +.|++|+|+|+.+.+|+|+.
T Consensus 117 paGL~aA~~La~~G~kV~VlEr~~~~~~R~~ 147 (549)
T 3nlc_A 117 PCGLFAGLVLAQMGFNPIIVERGKEVRERTK 147 (549)
T ss_dssp HHHHHHHHHHHHTTCCCEEECSSCCHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEEEccCccccccc
Confidence 49999997 67999999999998876653
No 90
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=89.49 E-value=0.19 Score=47.31 Aligned_cols=41 Identities=15% Similarity=0.053 Sum_probs=34.3
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCc
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIH 346 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~ 346 (350)
..+.++|.+.+. .|++|+++++|++|..++++|.|++.+|.
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g~ 194 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRGT 194 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSCE
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCCE
Confidence 457778887776 78999999999999998888988877663
No 91
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=89.35 E-value=0.44 Score=48.72 Aligned_cols=28 Identities=21% Similarity=0.115 Sum_probs=23.8
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
|+||++|+ ++|++|+|+|+.+.+|+...
T Consensus 274 iaGlsaA~~La~~G~~V~vlEk~~~~g~gaS 304 (689)
T 3pvc_A 274 IVSALTALALQRRGAVVTLYCADAQPAQGAS 304 (689)
T ss_dssp HHHHHHHHHHHTTTCCEEEEESSSSTTCSGG
T ss_pred HHHHHHHHHHHHCCCcEEEEeCCCccccccc
Confidence 49999998 67999999999998886543
No 92
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=89.26 E-value=0.18 Score=49.02 Aligned_cols=36 Identities=14% Similarity=0.174 Sum_probs=27.6
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEE--eCCeEEEEeC
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEF--LEKGVKAVDQ 343 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~--~~~gv~V~~~ 343 (350)
+.+.+.+.+. .|++|+++++|++|.. +++.+.|+..
T Consensus 226 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~ 264 (478)
T 1v59_A 226 VAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVE 264 (478)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEE
Confidence 5566667776 7899999999999988 5556666654
No 93
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=89.25 E-value=0.27 Score=48.33 Aligned_cols=51 Identities=12% Similarity=0.051 Sum_probs=34.1
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCccc
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVI 152 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~ 152 (350)
+++||++|. ++|++|+|+|+.+.++... .+ ..+ .+ ..+++++++|+.+++.
T Consensus 20 GpaGl~~A~~La~~G~~v~vlE~~~~~~~~~------r~-------~~l---~~---~~~~~l~~lGl~~~~~ 73 (500)
T 2qa1_A 20 GPAGMMLAGELRLAGVEVVVLERLVERTGES------RG-------LGF---TA---RTMEVFDQRGILPRFG 73 (500)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEESCCC-CCCC------CS-------EEE---CH---HHHHHHHTTTCGGGGC
T ss_pred CHHHHHHHHHHHHCCCCEEEEeCCCCCCCCC------Cc-------ceE---CH---HHHHHHHHCCCHHHHH
Confidence 349999997 6899999999987754211 11 112 12 5678889999866543
No 94
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=89.25 E-value=0.37 Score=44.55 Aligned_cols=31 Identities=16% Similarity=0.036 Sum_probs=24.9
Q ss_pred ehhhHhHhhh--cCCCCEEEEecCCCCCcceEE
Q psy7666 82 LVIRILCTVL--RISTPITLLESSSRLGGWVRS 112 (350)
Q Consensus 82 ~viaGLaaA~--~~G~~VtVlEa~drvGGRi~T 112 (350)
++|+||++|+ .+|++|+|+|+.+++|+....
T Consensus 17 aGi~Gls~A~~La~G~~V~vlE~~~~~g~~as~ 49 (381)
T 3nyc_A 17 AGIAGASTGYWLSAHGRVVVLEREAQPGYHSTG 49 (381)
T ss_dssp CSHHHHHHHHHHTTTSCEEEECSSSSTTSSGGG
T ss_pred CcHHHHHHHHHHhCCCCEEEEECCCCccccccc
Confidence 3459999998 469999999999999866443
No 95
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=89.24 E-value=0.15 Score=46.29 Aligned_cols=30 Identities=27% Similarity=0.203 Sum_probs=23.8
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcce
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWV 110 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi 110 (350)
.|+|| |||+||. ++|++|+|+|+. ..||.+
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~~ 44 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNRV 44 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGGG
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCee
Confidence 36666 9999996 689999999985 567754
No 96
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=89.10 E-value=0.19 Score=50.07 Aligned_cols=45 Identities=16% Similarity=0.152 Sum_probs=32.7
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecC
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKG 124 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~G 124 (350)
.+|+|| |||++|. +.|++|+|+|+++.+||....-.+ -|..+|..
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~y-Pg~~~d~~ 61 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRY-PGCRLDTE 61 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCC-TTCBCSSC
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCC-CceeecCc
Confidence 345555 9999987 579999999999999998754342 44444443
No 97
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=89.08 E-value=0.17 Score=53.90 Aligned_cols=33 Identities=24% Similarity=0.312 Sum_probs=28.6
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
.+|+|| |||+||. +.|++|+|+|+.+++||++.
T Consensus 129 ~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 129 TDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 346666 9999987 57999999999999999987
No 98
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=88.97 E-value=0.17 Score=46.74 Aligned_cols=41 Identities=12% Similarity=0.210 Sum_probs=32.0
Q ss_pred HHHHHHHhhc-CC-CEEEeCcceeEEEEeCCeEEEEeCCCcee
Q psy7666 308 IVNTLGEHLS-NK-VEVKMDTTCTNLEFLEKGVKAVDQPIHQM 348 (350)
Q Consensus 308 L~~aLa~~L~-~g-~~I~l~~~V~~I~~~~~gv~V~~~~G~~~ 348 (350)
+.+.+.+.+. .| ++|+++++|.+|..+++++.|+..+|+.+
T Consensus 216 ~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~ 258 (369)
T 3d1c_A 216 TRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSV 258 (369)
T ss_dssp HHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCE
T ss_pred HHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEe
Confidence 4456666666 65 89999999999988777888888888654
No 99
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=88.90 E-value=0.22 Score=46.16 Aligned_cols=41 Identities=10% Similarity=0.042 Sum_probs=35.0
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCc
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIH 346 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~ 346 (350)
..+.++|.+.+. .|++|+++++|++|..++++|.|++.+|.
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~ 190 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGE 190 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCe
Confidence 467888888887 78999999999999998888888888775
No 100
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=88.84 E-value=0.18 Score=49.20 Aligned_cols=37 Identities=16% Similarity=0.132 Sum_probs=29.6
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCC
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQP 344 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~ 344 (350)
+.+.+.+.|. .|++|+++++|++|+.+++++.|+..+
T Consensus 228 ~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~ 265 (482)
T 1ojt_A 228 LVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEG 265 (482)
T ss_dssp HHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEES
T ss_pred HHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEec
Confidence 5556666676 689999999999999887777777665
No 101
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=88.79 E-value=0.16 Score=47.25 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=25.6
Q ss_pred eeehh----hHhHhhh---cC--CCCEEEEecCCCCCcceE
Q psy7666 80 LLLVI----RILCTVL---RI--STPITLLESSSRLGGWVR 111 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~--G~~VtVlEa~drvGGRi~ 111 (350)
+|+|| +||+||+ +. |++|+|+|+.+.+||-..
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~ 107 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccc
Confidence 45555 9999987 44 999999999999987543
No 102
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=88.78 E-value=0.18 Score=49.80 Aligned_cols=29 Identities=21% Similarity=0.394 Sum_probs=22.5
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeC
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLE 335 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~ 335 (350)
.+.+.+.+.|. .|++|++++.|++|...+
T Consensus 251 ~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~ 280 (519)
T 3qfa_A 251 DMANKIGEHMEEHGIKFIRQFVPIKVEQIE 280 (519)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCeEEEEEEcc
Confidence 35666667776 789999999999987643
No 103
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.44 E-value=0.14 Score=49.55 Aligned_cols=31 Identities=29% Similarity=0.472 Sum_probs=25.7
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
+|+|| |||+||. +.|++|+|+|+ +.+||.+.
T Consensus 7 dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 7 TLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 45555 9999987 46999999999 89999865
No 104
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=88.36 E-value=0.2 Score=47.00 Aligned_cols=25 Identities=12% Similarity=-0.057 Sum_probs=20.8
Q ss_pred ehhhHhHhhh---cC--CCCEEEEecCCCC
Q psy7666 82 LVIRILCTVL---RI--STPITLLESSSRL 106 (350)
Q Consensus 82 ~viaGLaaA~---~~--G~~VtVlEa~drv 106 (350)
++++||++|. ++ |++|+|+|+++.+
T Consensus 8 aG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 8 AGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 3459999987 45 9999999998876
No 105
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=88.35 E-value=0.19 Score=45.84 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=26.5
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEec----CCCCCcceEE
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLES----SSRLGGWVRS 112 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa----~drvGGRi~T 112 (350)
+|+|| +||++|. ++|++|+|+|+ ...+||++..
T Consensus 10 ~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 53 (333)
T 1vdc_A 10 RLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTT 53 (333)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeee
Confidence 45555 9999987 57999999999 6788987654
No 106
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=88.33 E-value=0.35 Score=47.47 Aligned_cols=50 Identities=14% Similarity=0.060 Sum_probs=34.5
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCCCccc
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLADQVI 152 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~~~l~ 152 (350)
++||++|. ++|++|+|+|+.+.++... .+ ..+ .+ ..+++++++|+.+++.
T Consensus 22 paGl~~A~~La~~G~~v~vlE~~~~~~~~~------r~-------~~l---~~---~~~~~l~~lGl~~~~~ 74 (499)
T 2qa2_A 22 PAGLMLAGELRLGGVDVMVLEQLPQRTGES------RG-------LGF---TA---RTMEVFDQRGILPAFG 74 (499)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCSSCCCCC------CS-------EEE---CH---HHHHHHHHTTCGGGGC
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCCC------ce-------eEE---CH---HHHHHHHHCCCHHHHH
Confidence 49999997 6899999999987653210 11 112 22 5678899999876543
No 107
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=88.23 E-value=0.19 Score=48.84 Aligned_cols=39 Identities=13% Similarity=0.120 Sum_probs=30.8
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCC
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPI 345 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G 345 (350)
.+.+.+.+.+. .|++|+++++|++|+.+++++.|+..++
T Consensus 222 ~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~ 261 (476)
T 3lad_A 222 QVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDA 261 (476)
T ss_dssp HHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESS
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeC
Confidence 36666677776 7899999999999998887777766654
No 108
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=87.85 E-value=0.23 Score=44.90 Aligned_cols=31 Identities=10% Similarity=0.199 Sum_probs=24.6
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCe
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG 337 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g 337 (350)
.+.+.+.+.+. .|++|+++++|++|..++++
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~ 216 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGDQMG 216 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEECSSS
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcCCCc
Confidence 45666777776 78999999999999987644
No 109
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=87.81 E-value=0.27 Score=44.35 Aligned_cols=28 Identities=25% Similarity=0.198 Sum_probs=23.2
Q ss_pred hhHhHhhh---cCCC-CEEEEecCCCCCcceEE
Q psy7666 84 IRILCTVL---RIST-PITLLESSSRLGGWVRS 112 (350)
Q Consensus 84 iaGLaaA~---~~G~-~VtVlEa~drvGGRi~T 112 (350)
.+||+||. ++|+ +|+|+|+ +.+||.+..
T Consensus 11 ~aGl~aA~~l~~~g~~~v~lie~-~~~gg~~~~ 42 (311)
T 2q0l_A 11 PAGLSAGLYATRGGVKNAVLFEK-GMPGGQITG 42 (311)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECS-SSTTCGGGG
T ss_pred HHHHHHHHHHHHCCCCcEEEEcC-CCCCccccc
Confidence 39999987 5799 9999999 578987653
No 110
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=87.81 E-value=0.27 Score=45.76 Aligned_cols=40 Identities=13% Similarity=0.111 Sum_probs=34.3
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCC
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPI 345 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G 345 (350)
..+.++|.+.+. .|++|+++++|++|+.++++|.|++.+|
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g 190 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG 190 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC
Confidence 568888888887 7899999999999999887888887766
No 111
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=87.74 E-value=0.22 Score=48.41 Aligned_cols=37 Identities=24% Similarity=0.179 Sum_probs=28.6
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCe--EEEEeCC
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG--VKAVDQP 344 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g--v~V~~~~ 344 (350)
+.+.+.+.|. .|++|+++++|++|+.++++ +.|++.+
T Consensus 230 ~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~ 269 (478)
T 3dk9_A 230 ISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAV 269 (478)
T ss_dssp HHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEcc
Confidence 5556666666 78999999999999987655 6677665
No 112
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=87.61 E-value=0.27 Score=46.07 Aligned_cols=48 Identities=8% Similarity=0.123 Sum_probs=36.4
Q ss_pred EEEecCcH---HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCe-EEEEeCCC
Q psy7666 298 VWSVEGGL---QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG-VKAVDQPI 345 (350)
Q Consensus 298 ~~~~~GG~---~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g-v~V~~~~G 345 (350)
.+.+.+|. ..+.+.|.+.+. .|++|+++++|++|..++++ +.|++.+|
T Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g 215 (405)
T 2gag_B 163 TWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG 215 (405)
T ss_dssp EEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc
Confidence 44444443 368888888887 78999999999999987665 56777777
No 113
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=87.32 E-value=0.28 Score=49.01 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=25.7
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcce
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWV 110 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi 110 (350)
+|+|| +||+||+ ++|++|+|+|+.+.+||..
T Consensus 128 ~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~ 165 (572)
T 1d4d_A 128 DVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNT 165 (572)
T ss_dssp SEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTG
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcch
Confidence 45555 9999987 5799999999999998764
No 114
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=87.20 E-value=0.24 Score=48.19 Aligned_cols=41 Identities=17% Similarity=0.096 Sum_probs=30.9
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCe--EEEEeCCC-cee
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG--VKAVDQPI-HQM 348 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g--v~V~~~~G-~~~ 348 (350)
+.+.+.+.+. .|++|+++++|++|+.++++ +.|++.+| +++
T Consensus 228 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i 272 (479)
T 2hqm_A 228 IQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSID 272 (479)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEE
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEE
Confidence 5555666666 68999999999999886555 78888888 544
No 115
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=87.16 E-value=0.74 Score=42.16 Aligned_cols=30 Identities=13% Similarity=0.039 Sum_probs=24.6
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCcceEE
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGGWVRS 112 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGGRi~T 112 (350)
+++||++|+ ++|++|+|+|+.+.+|+....
T Consensus 13 G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s~ 45 (369)
T 3dme_A 13 GVVGLAIARALAAGGHEVLVAEAAEGIGTGTSS 45 (369)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECSSSSSSCSTTS
T ss_pred CHHHHHHHHHHHhCCCeEEEEeCCCCCCCccCc
Confidence 349999998 679999999999888876443
No 116
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=87.14 E-value=0.34 Score=45.77 Aligned_cols=22 Identities=5% Similarity=-0.049 Sum_probs=19.1
Q ss_pred hhhHhHhhh---cCCCCEEEEecCC
Q psy7666 83 VIRILCTVL---RISTPITLLESSS 104 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~d 104 (350)
+++||++|+ ++|++|+|+|+.+
T Consensus 14 G~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 14 GPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp SHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 349999997 6799999999987
No 117
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=87.12 E-value=0.3 Score=47.96 Aligned_cols=31 Identities=16% Similarity=0.193 Sum_probs=25.3
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcc
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGW 109 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGR 109 (350)
.+|+|| +||++|. +.|.+|+|+|+++.+|+.
T Consensus 93 ~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~ 130 (497)
T 2bry_A 93 TKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH 130 (497)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC
T ss_pred CCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC
Confidence 456655 9999987 579999999999998754
No 118
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=86.97 E-value=0.3 Score=45.68 Aligned_cols=25 Identities=24% Similarity=0.199 Sum_probs=21.4
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCCc
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLGG 108 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvGG 108 (350)
++||++|. ++|++|+|+|+++.+++
T Consensus 21 ~aGl~~A~~L~~~G~~v~viE~~~~~~~ 48 (379)
T 3alj_A 21 FAGLTAAIALKQNGWDVRLHEKSSELRA 48 (379)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred HHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 49999987 67999999999988764
No 119
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=86.96 E-value=0.27 Score=47.47 Aligned_cols=41 Identities=12% Similarity=0.031 Sum_probs=32.0
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCe-EEEEeCCCcee
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG-VKAVDQPIHQM 348 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g-v~V~~~~G~~~ 348 (350)
+.+.+.+.+. .|++|+++++|++|+.++++ +.|++.+|+++
T Consensus 210 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i 252 (450)
T 1ges_A 210 ISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSE 252 (450)
T ss_dssp HHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEE
Confidence 5556666666 68999999999999987654 78888888754
No 120
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=86.90 E-value=0.31 Score=43.30 Aligned_cols=47 Identities=13% Similarity=-0.006 Sum_probs=29.3
Q ss_pred EEEecCcHHHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCcee
Q psy7666 298 VWSVEGGLQTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQM 348 (350)
Q Consensus 298 ~~~~~GG~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~ 348 (350)
...+..+...+.+.+.+.+. .|++|+. ++|++|..++ .|+..+|+++
T Consensus 166 v~~v~~~~~~~~~~~~~~l~~~gv~i~~-~~v~~i~~~~---~v~~~~g~~~ 213 (297)
T 3fbs_A 166 TTFFTNGIVEPDADQHALLAARGVRVET-TRIREIAGHA---DVVLADGRSI 213 (297)
T ss_dssp EEEECTTTCCCCHHHHHHHHHTTCEEEC-SCEEEEETTE---EEEETTSCEE
T ss_pred EEEEECCCCCCCHHHHHHHHHCCcEEEc-ceeeeeecCC---eEEeCCCCEE
Confidence 33344333344555666666 7899985 8999886432 6666777654
No 121
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=86.87 E-value=0.29 Score=47.85 Aligned_cols=38 Identities=5% Similarity=-0.057 Sum_probs=29.6
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeC--CC
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQ--PI 345 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~--~G 345 (350)
.+.+.+.+.|. . ++|+++++|++|+.+++++.|+.. +|
T Consensus 216 ~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G 256 (492)
T 3ic9_A 216 EMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSG 256 (492)
T ss_dssp HHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTC
T ss_pred HHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCC
Confidence 35666666666 4 899999999999998888877764 66
No 122
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=86.79 E-value=0.34 Score=47.26 Aligned_cols=38 Identities=8% Similarity=0.129 Sum_probs=27.8
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCC-eEEEEeCC
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEK-GVKAVDQP 344 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~-gv~V~~~~ 344 (350)
.+.+.+.+.+. .|++|++++.|++|...++ .+.|+..+
T Consensus 226 ~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~ 265 (488)
T 3dgz_A 226 QMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWED 265 (488)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEe
Confidence 35666677776 7899999999999988544 46665543
No 123
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=86.52 E-value=0.28 Score=47.53 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=33.5
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCc-ee
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIH-QM 348 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~-~~ 348 (350)
+.+.+.+.+. .|++|+++++|++|..+++++.|++.+|+ ++
T Consensus 209 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i 251 (463)
T 2r9z_A 209 LSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLE 251 (463)
T ss_dssp HHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEE
Confidence 5556666676 78999999999999988778888888887 44
No 124
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=86.52 E-value=0.27 Score=48.17 Aligned_cols=31 Identities=23% Similarity=0.309 Sum_probs=25.8
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
+|+|| +||+||. +. ++|+|+|+.+++||.+.
T Consensus 110 dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~ 147 (493)
T 1y56_A 110 DVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW 147 (493)
T ss_dssp SCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG
T ss_pred CEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee
Confidence 45555 9999987 46 99999999999999865
No 125
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=86.50 E-value=0.2 Score=49.04 Aligned_cols=43 Identities=12% Similarity=0.177 Sum_probs=33.4
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCC-eEEEEeCCCceec
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEK-GVKAVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~-gv~V~~~~G~~~~ 349 (350)
.+.+.+.+.+. .|++|+++++|++|..+++ .+.|++.+|+++.
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~ 280 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLD 280 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEE
Confidence 35666777776 7899999999999998764 4788888887543
No 126
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=86.42 E-value=0.24 Score=48.46 Aligned_cols=42 Identities=14% Similarity=0.117 Sum_probs=33.3
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCC-eEEEEeCCCcee
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEK-GVKAVDQPIHQM 348 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~-gv~V~~~~G~~~ 348 (350)
.+.+.+.+.+. .|++|+++++|++|+.+++ .+.|++.+|+++
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i 275 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEA 275 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEE
Confidence 35666777776 7899999999999998765 478888888654
No 127
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=86.37 E-value=0.31 Score=47.19 Aligned_cols=38 Identities=11% Similarity=0.154 Sum_probs=30.6
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCC
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQP 344 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~ 344 (350)
.+.+.+.+.+. .|++|+++++|++|..+++.+.|++.+
T Consensus 217 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~ 255 (467)
T 1zk7_A 217 AIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTTH 255 (467)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEETT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEECC
Confidence 46677777777 789999999999999887777777653
No 128
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=86.32 E-value=0.38 Score=44.06 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=25.7
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRS 112 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T 112 (350)
.+|+|| +||+||. +.|++|+|+|+. .+||.+..
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 54 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMT 54 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceec
Confidence 456665 9999987 579999999964 78887643
No 129
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=86.29 E-value=0.28 Score=45.90 Aligned_cols=29 Identities=21% Similarity=0.162 Sum_probs=23.8
Q ss_pred hhhHhHhhh---cC--CCCEEEEecCCCCCcceE
Q psy7666 83 VIRILCTVL---RI--STPITLLESSSRLGGWVR 111 (350)
Q Consensus 83 viaGLaaA~---~~--G~~VtVlEa~drvGGRi~ 111 (350)
.++||+||+ ++ |++|+|+|+.+.+||.+.
T Consensus 88 G~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~ 121 (344)
T 3jsk_A 88 GSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW 121 (344)
T ss_dssp SHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT
T ss_pred cHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc
Confidence 349999987 33 999999999999987644
No 130
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=86.19 E-value=1.3 Score=41.44 Aligned_cols=26 Identities=15% Similarity=-0.019 Sum_probs=21.4
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCCC
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRLG 107 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drvG 107 (350)
++++||++|+ ++|++|+|+|+.+..+
T Consensus 12 aG~~Gl~~A~~La~~G~~V~vlE~~~~~~ 40 (397)
T 2oln_A 12 GGPVGLATAWQVAERGHRVLVLERHTFFN 40 (397)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEESSCTTC
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 3459999998 6799999999987654
No 131
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=86.04 E-value=0.28 Score=49.20 Aligned_cols=27 Identities=15% Similarity=0.238 Sum_probs=22.9
Q ss_pred hhhHhHhhh---cC------CCCEEEEecCCCCCcc
Q psy7666 83 VIRILCTVL---RI------STPITLLESSSRLGGW 109 (350)
Q Consensus 83 viaGLaaA~---~~------G~~VtVlEa~drvGGR 109 (350)
++|||+||. ++ |.+|+|+|+.+.+|+.
T Consensus 44 G~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 44 GPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH 79 (584)
T ss_dssp SHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT
T ss_pred CHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc
Confidence 349999997 45 9999999999888875
No 132
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=86.03 E-value=1.1 Score=42.81 Aligned_cols=47 Identities=13% Similarity=0.229 Sum_probs=40.5
Q ss_pred EEecCcHHHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCC
Q psy7666 299 WSVEGGLQTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPI 345 (350)
Q Consensus 299 ~~~~GG~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G 345 (350)
..+......+.+.|.+.+. .|++|+++++|++|..+++++.|++.+|
T Consensus 125 ~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g 172 (417)
T 3v76_A 125 LFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG 172 (417)
T ss_dssp EEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE
T ss_pred EeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc
Confidence 3356667789999998887 7899999999999999988999998887
No 133
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=85.88 E-value=0.32 Score=48.62 Aligned_cols=41 Identities=15% Similarity=0.111 Sum_probs=29.9
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
.+.+.+.+.+. .|++|+++++|++|..++++ |+..+|+++.
T Consensus 229 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--v~~~~g~~i~ 270 (588)
T 3ics_A 229 EMAAYVHEHMKNHDVELVFEDGVDALEENGAV--VRLKSGSVIQ 270 (588)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEGGGTE--EEETTSCEEE
T ss_pred HHHHHHHHHHHHcCCEEEECCeEEEEecCCCE--EEECCCCEEE
Confidence 35666777777 78999999999999876554 4556666543
No 134
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=85.66 E-value=0.44 Score=45.04 Aligned_cols=25 Identities=40% Similarity=0.372 Sum_probs=21.2
Q ss_pred hhhHhHhhh---cCCCC-EEEEecCCCCC
Q psy7666 83 VIRILCTVL---RISTP-ITLLESSSRLG 107 (350)
Q Consensus 83 viaGLaaA~---~~G~~-VtVlEa~drvG 107 (350)
+++||++|. ++|.+ |+|+|+++.++
T Consensus 13 G~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 13 GIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp SHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 349999997 67999 99999988765
No 135
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=85.66 E-value=0.2 Score=48.09 Aligned_cols=42 Identities=19% Similarity=0.120 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhhc-CCCEEEeCcceeEEEE---------------eCCeE-EEEeCCCc
Q psy7666 305 LQTIVNTLGEHLS-NKVEVKMDTTCTNLEF---------------LEKGV-KAVDQPIH 346 (350)
Q Consensus 305 ~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~---------------~~~gv-~V~~~~G~ 346 (350)
...+.++|++.+. .|++|+++++|++|.. +++++ .|.+.+|.
T Consensus 180 ~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g~ 238 (448)
T 3axb_A 180 AEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDGT 238 (448)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTSC
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCCE
Confidence 3468888888887 8999999999999998 55554 67777773
No 136
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.53 E-value=0.34 Score=46.73 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=28.4
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeC
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQ 343 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~ 343 (350)
+.+.+.+.+. .|++|+++++|++|+.+++++.|+..
T Consensus 213 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~ 249 (455)
T 1ebd_A 213 MAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYE 249 (455)
T ss_dssp HHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEE
Confidence 5566666666 78999999999999988777776653
No 137
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=85.31 E-value=0.4 Score=48.22 Aligned_cols=28 Identities=18% Similarity=0.159 Sum_probs=22.1
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCC
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLG 107 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvG 107 (350)
+|+|| +||++|+ ++|++|+|+|+.+..+
T Consensus 25 DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~ 59 (591)
T 3i3l_A 25 KVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPR 59 (591)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC
T ss_pred CEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCC
Confidence 45554 9999987 6799999999986543
No 138
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=85.04 E-value=0.36 Score=46.66 Aligned_cols=38 Identities=8% Similarity=-0.000 Sum_probs=28.6
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeC-CC
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQ-PI 345 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~-~G 345 (350)
+.+.+.+.+. .|++|+++++|++|+.+++++.|+.. +|
T Consensus 214 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g 253 (464)
T 2a8x_A 214 VSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDG 253 (464)
T ss_dssp HHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSS
T ss_pred HHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCC
Confidence 4455566665 68999999999999987766777654 55
No 139
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=84.82 E-value=0.5 Score=44.67 Aligned_cols=33 Identities=15% Similarity=0.109 Sum_probs=25.3
Q ss_pred CCCceeehh----hHhHhhh---cCCCCEEEEecCCCCCc
Q psy7666 76 PDLLLLLVI----RILCTVL---RISTPITLLESSSRLGG 108 (350)
Q Consensus 76 ~~~~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGG 108 (350)
++.++|+|| |||+||. ..+.+|+|+|+.+.++.
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y 46 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY 46 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc
Confidence 334566665 9999987 46899999999998774
No 140
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=84.54 E-value=0.28 Score=47.98 Aligned_cols=42 Identities=12% Similarity=0.071 Sum_probs=33.9
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
+.+.+.+.+. .|++|+++++|++|..+++++.|+..+|++++
T Consensus 225 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~ 267 (499)
T 1xdi_A 225 AALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVE 267 (499)
T ss_dssp HHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEE
Confidence 5566666676 78999999999999987777888888887653
No 141
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=84.50 E-value=0.48 Score=44.04 Aligned_cols=41 Identities=5% Similarity=-0.074 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEE-EEeCCC
Q psy7666 305 LQTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVK-AVDQPI 345 (350)
Q Consensus 305 ~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~-V~~~~G 345 (350)
...+.++|.+.+. .|++|+++++|++|..++++|. |++.+|
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g 190 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG 190 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc
Confidence 3567888888887 7899999999999999888877 887776
No 142
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=84.26 E-value=0.37 Score=46.41 Aligned_cols=39 Identities=15% Similarity=0.204 Sum_probs=31.9
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCC
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPI 345 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G 345 (350)
.+.+.+.+.+. .|++|+++++|++|...++++.|++.+|
T Consensus 190 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g 229 (452)
T 3oc4_A 190 EMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ 229 (452)
T ss_dssp HHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC
Confidence 36667777777 7899999999999998777788877766
No 143
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=84.16 E-value=2.4 Score=40.60 Aligned_cols=47 Identities=17% Similarity=0.223 Sum_probs=39.1
Q ss_pred CcHHHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCe-EEEEeCCCceec
Q psy7666 303 GGLQTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG-VKAVDQPIHQMT 349 (350)
Q Consensus 303 GG~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g-v~V~~~~G~~~~ 349 (350)
+....+.++|.+.+. .|++|+++++|++|..++++ +.|++.+|++++
T Consensus 131 ~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~ 179 (447)
T 2i0z_A 131 NKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLE 179 (447)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEE
T ss_pred CCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEE
Confidence 345678899998888 89999999999999988777 788888887554
No 144
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=84.16 E-value=0.54 Score=46.85 Aligned_cols=38 Identities=5% Similarity=-0.036 Sum_probs=30.9
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeE-EEEeC
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGV-KAVDQ 343 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv-~V~~~ 343 (350)
..+..+|++.+. .|++|+++++|++|..+++++ .|+..
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~ 209 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAK 209 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEE
Confidence 568888888887 899999999999999988763 35543
No 145
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=84.09 E-value=0.53 Score=46.07 Aligned_cols=42 Identities=12% Similarity=-0.127 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEe---CCCc
Q psy7666 305 LQTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVD---QPIH 346 (350)
Q Consensus 305 ~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~---~~G~ 346 (350)
-..+..+|++.+. .|++|+++++|++|..+++.+.|++ .+|+
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~ 193 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGK 193 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCC
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCC
Confidence 4557888888877 7899999999999998876666665 3564
No 146
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=83.94 E-value=0.53 Score=43.58 Aligned_cols=23 Identities=17% Similarity=0.161 Sum_probs=19.5
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCC
Q psy7666 83 VIRILCTVL---RISTPITLLESSSR 105 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~dr 105 (350)
+|+||++|+ ++|++|+|+|+.+-
T Consensus 15 Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 15 GVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 459999998 57999999999763
No 147
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=83.89 E-value=0.5 Score=45.69 Aligned_cols=39 Identities=15% Similarity=0.159 Sum_probs=31.0
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeC-C--Cc
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQ-P--IH 346 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~-~--G~ 346 (350)
+.+.+.+.+. .|++|+++++|++|..+++++.|+.. + |+
T Consensus 212 ~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~ 254 (464)
T 2eq6_A 212 TAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGE 254 (464)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCS
T ss_pred HHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCc
Confidence 5556666666 78999999999999988878777765 5 65
No 148
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=83.75 E-value=0.49 Score=45.32 Aligned_cols=25 Identities=12% Similarity=0.085 Sum_probs=20.7
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCC
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSS 104 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~d 104 (350)
+|+|| +||++|. ++|++|+|+|+++
T Consensus 24 ~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 24 RIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45554 9999997 6899999999986
No 149
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=83.63 E-value=0.29 Score=45.17 Aligned_cols=27 Identities=15% Similarity=-0.097 Sum_probs=20.5
Q ss_pred ehhhHhHhhh---cCC------CCEEEEecCCCCCc
Q psy7666 82 LVIRILCTVL---RIS------TPITLLESSSRLGG 108 (350)
Q Consensus 82 ~viaGLaaA~---~~G------~~VtVlEa~drvGG 108 (350)
++|+||++|+ ++| .+|+|+|+..-.+|
T Consensus 8 gGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 8 AGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 3459999998 457 99999999864333
No 150
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=83.62 E-value=0.47 Score=47.66 Aligned_cols=26 Identities=12% Similarity=-0.077 Sum_probs=21.7
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCc
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGG 108 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGG 108 (350)
++|||+||+ ++|.+|+|+|+.+..||
T Consensus 16 G~AGl~AA~~la~~G~~V~vlEK~~~~~g 44 (588)
T 2wdq_A 16 GGAGMRAALQISQSGQTCALLSKVFPTRS 44 (588)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEESSCGGGS
T ss_pred CHHHHHHHHHHHHCCCcEEEEecCCCCCC
Confidence 349999998 56999999999887654
No 151
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=83.58 E-value=0.39 Score=46.64 Aligned_cols=32 Identities=16% Similarity=0.092 Sum_probs=26.6
Q ss_pred ceeehh----hHhHhhh---cCC--CCEEEEecCCCCCcce
Q psy7666 79 LLLLVI----RILCTVL---RIS--TPITLLESSSRLGGWV 110 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G--~~VtVlEa~drvGGRi 110 (350)
++|+|| |||+||. +.| ++|+|+|+.+++||++
T Consensus 7 ~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~ 47 (460)
T 1cjc_A 7 PQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLV 47 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHH
T ss_pred ceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCcee
Confidence 457666 8999987 457 9999999999999976
No 152
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=83.56 E-value=0.32 Score=47.22 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=27.3
Q ss_pred ceeehh----hHhHhhh---c-C------CCCEEEEecCCCCCcceE
Q psy7666 79 LLLLVI----RILCTVL---R-I------STPITLLESSSRLGGWVR 111 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~-~------G~~VtVlEa~drvGGRi~ 111 (350)
++|+|| |||+||. + . |++|+|+|+.+.+||.++
T Consensus 4 ~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 4 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 456666 9999986 5 5 999999999999999873
No 153
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=83.29 E-value=0.39 Score=45.88 Aligned_cols=36 Identities=8% Similarity=0.102 Sum_probs=25.4
Q ss_pred HHHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEe
Q psy7666 305 LQTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVD 342 (350)
Q Consensus 305 ~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~ 342 (350)
+..+.+.+.+.+. .|++|+++++|++|+. +++.++.
T Consensus 199 ~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~v~~~~ 235 (430)
T 3h28_A 199 IGASKRLVEDLFAERNIDWIANVAVKAIEP--DKVIYED 235 (430)
T ss_dssp STTHHHHHHHHHHHTTCEEECSCEEEEECS--SEEEEEC
T ss_pred chHHHHHHHHHHHHCCCEEEeCCEEEEEeC--CeEEEEe
Confidence 3445566666776 7899999999999853 4455544
No 154
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=83.19 E-value=1.4 Score=40.71 Aligned_cols=25 Identities=4% Similarity=-0.121 Sum_probs=20.9
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCC
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLG 107 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvG 107 (350)
+++||++|+ ++|++|+|+|+.+..+
T Consensus 12 G~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 12 GSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred CHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 459999998 6799999999987655
No 155
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=82.99 E-value=0.32 Score=46.05 Aligned_cols=40 Identities=5% Similarity=0.043 Sum_probs=28.5
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
..+.+.+.+.+. .|++++++++|++|+. ++ |+..+|+++.
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~--v~~~~g~~~~ 258 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE--IVDEKGNTIP 258 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--SE--EEETTSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce--EEECCCCEEe
Confidence 346666677676 6899999999999964 33 5666776653
No 156
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=82.81 E-value=0.69 Score=45.35 Aligned_cols=21 Identities=14% Similarity=-0.067 Sum_probs=18.8
Q ss_pred hhHhHhhh---cCCCCEEEEecCC
Q psy7666 84 IRILCTVL---RISTPITLLESSS 104 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~d 104 (350)
++||++|+ ++|++|+|+|+.+
T Consensus 17 ~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 17 PGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp HHHHHHHHHHHTTTCCEEEECSSC
T ss_pred HHHHHHHHHHHhCCCCEEEEccCC
Confidence 49999987 6799999999997
No 157
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=82.79 E-value=0.62 Score=43.68 Aligned_cols=24 Identities=17% Similarity=0.102 Sum_probs=20.3
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCC
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRL 106 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drv 106 (350)
+++||++|+ ++|++|+|+|+++..
T Consensus 15 G~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 15 GIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 349999997 679999999998765
No 158
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=82.72 E-value=0.56 Score=45.87 Aligned_cols=41 Identities=7% Similarity=0.134 Sum_probs=32.7
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCe-EEEEeCCCce
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG-VKAVDQPIHQ 347 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g-v~V~~~~G~~ 347 (350)
.+.+.+.+.|. .|++|+++++|++|..++++ +.|+..+|++
T Consensus 218 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~ 260 (500)
T 1onf_A 218 SVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRI 260 (500)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCE
T ss_pred hhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcE
Confidence 36666777777 78999999999999886543 7888888875
No 159
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=82.71 E-value=1.5 Score=40.46 Aligned_cols=27 Identities=4% Similarity=-0.167 Sum_probs=22.4
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCcc
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGGW 109 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGGR 109 (350)
+|+||++|+ ++|++|+|+|+.+..+|.
T Consensus 11 Gi~Gl~~A~~La~~G~~V~vle~~~~~~~~ 40 (372)
T 2uzz_A 11 GSVGAAAGYYATRAGLNVLMTDAHMPPHQH 40 (372)
T ss_dssp THHHHHHHHHHHHTTCCEEEECSSCSSSSS
T ss_pred CHHHHHHHHHHHHCCCeEEEEecCCCCCCC
Confidence 459999998 679999999998877654
No 160
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=82.61 E-value=1.4 Score=41.29 Aligned_cols=44 Identities=11% Similarity=0.113 Sum_probs=37.1
Q ss_pred HHHHHHHHHhhc-C-CCEEEeCcceeEEEEeCCeE--EEEeCCCceec
Q psy7666 306 QTIVNTLGEHLS-N-KVEVKMDTTCTNLEFLEKGV--KAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~-~-g~~I~l~~~V~~I~~~~~gv--~V~~~~G~~~~ 349 (350)
..+.+.|.+.+. . |++|+++++|++|+.++++| .|++.+|++++
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ 154 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLR 154 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEE
Confidence 457778888887 4 89999999999999988888 89998887654
No 161
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=82.36 E-value=0.43 Score=46.21 Aligned_cols=44 Identities=20% Similarity=0.179 Sum_probs=35.4
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
..+.+.+.+.+. .|++|+++++|++|..+++++.|+..+|+++.
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~ 246 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLD 246 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEE
Confidence 346667777776 78999999999999987777888888887654
No 162
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=82.34 E-value=1.7 Score=40.27 Aligned_cols=26 Identities=15% Similarity=0.119 Sum_probs=21.1
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCCCc
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRLGG 108 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drvGG 108 (350)
++++||++|+ ++|++|+|+|+. .+|+
T Consensus 13 gGi~Gl~~A~~La~~G~~V~lle~~-~~~~ 41 (382)
T 1y56_B 13 GGIVGVTIAHELAKRGEEVTVIEKR-FIGS 41 (382)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSS-STTC
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCC-CCCC
Confidence 3459999998 679999999998 4554
No 163
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=82.33 E-value=1.1 Score=41.36 Aligned_cols=30 Identities=20% Similarity=0.108 Sum_probs=23.1
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCc
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGG 108 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGG 108 (350)
.+|+|| +||++|+ ++|++|+|+|+.+..+|
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g 54 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGR 54 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTT
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcc
Confidence 345554 9999998 67999999999865444
No 164
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=82.18 E-value=0.56 Score=44.40 Aligned_cols=26 Identities=8% Similarity=0.014 Sum_probs=20.4
Q ss_pred hhhHhHhhh---cC--CCCEEEEecCCCCCc
Q psy7666 83 VIRILCTVL---RI--STPITLLESSSRLGG 108 (350)
Q Consensus 83 viaGLaaA~---~~--G~~VtVlEa~drvGG 108 (350)
+|+||++|+ ++ |++|+|+|+.+..+|
T Consensus 45 Gi~Gls~A~~La~~~pG~~V~vlE~~~~~~~ 75 (405)
T 3c4n_A 45 GRMGAACAFYLRQLAPGRSLLLVEEGGLPNE 75 (405)
T ss_dssp SHHHHHHHHHHHHHCTTSCEEEECSSCSSCT
T ss_pred cHHHHHHHHHHHhcCCCCeEEEEeCCCCCCc
Confidence 349999997 56 999999999765443
No 165
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=81.94 E-value=0.66 Score=45.04 Aligned_cols=38 Identities=5% Similarity=0.059 Sum_probs=28.8
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCC-eEEEEeCCC
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEK-GVKAVDQPI 345 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~-gv~V~~~~G 345 (350)
+.+.+.+.|. .|++|+++++|++|+..++ .+.|+..++
T Consensus 229 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~ 268 (483)
T 3dgh_A 229 MAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNV 268 (483)
T ss_dssp HHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEET
T ss_pred HHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecC
Confidence 5566677776 7899999999999998655 466666554
No 166
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=81.90 E-value=0.66 Score=46.02 Aligned_cols=27 Identities=15% Similarity=0.047 Sum_probs=21.3
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCCCcc
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRLGGW 109 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drvGGR 109 (350)
+++|||+||+ + |.+|+|+|+.+..||.
T Consensus 16 ~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 16 SGAAGLSLALRLAD-QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp CSHHHHHHHHHHTT-TSCEEEECSSCTTC--
T ss_pred ccHHHHHHHHHHhc-CCcEEEEECCCCCCCC
Confidence 3459999998 4 9999999999887764
No 167
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=81.82 E-value=0.67 Score=46.89 Aligned_cols=26 Identities=4% Similarity=-0.107 Sum_probs=23.0
Q ss_pred hHhHhhh---cCCCCEEEEecCCCCCcce
Q psy7666 85 RILCTVL---RISTPITLLESSSRLGGWV 110 (350)
Q Consensus 85 aGLaaA~---~~G~~VtVlEa~drvGGRi 110 (350)
+||+||. ++|++|+|+|+.+..||..
T Consensus 57 aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 57 IGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp HHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred HHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 9999987 6799999999999999843
No 168
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=81.80 E-value=0.86 Score=44.80 Aligned_cols=25 Identities=20% Similarity=0.244 Sum_probs=21.1
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCC
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLG 107 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvG 107 (350)
+++||++|+ +.|.+|+|+|+.+.++
T Consensus 14 G~aGl~~A~~La~~G~~v~viEr~~~~~ 41 (535)
T 3ihg_A 14 GLGGLSTAMFLARQGVRVLVVERRPGLS 41 (535)
T ss_dssp SHHHHHHHHHHHTTTCCEEEECSSSSCC
T ss_pred CHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 349999997 6799999999987654
No 169
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=81.24 E-value=0.62 Score=44.80 Aligned_cols=25 Identities=16% Similarity=-0.037 Sum_probs=20.6
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCC
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRL 106 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drv 106 (350)
++++||++|+ ++|++|+|+|+.+..
T Consensus 14 aG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 14 GGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp CSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred cCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 3459999997 579999999998753
No 170
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=80.94 E-value=0.67 Score=46.87 Aligned_cols=26 Identities=4% Similarity=-0.207 Sum_probs=21.5
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCCcc
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLGGW 109 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvGGR 109 (350)
+|||+||+ ++|.+|+|+|+....||.
T Consensus 28 ~AGl~AAl~aa~~G~~V~vlEK~~~~~g~ 56 (621)
T 2h88_A 28 GAGLRAAFGLSEAGFNTACVTKLFPTRSH 56 (621)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESSCGGGSG
T ss_pred HHHHHHHHHHHHCCCcEEEEeccCCCCCC
Confidence 49999998 579999999998766554
No 171
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=80.61 E-value=0.86 Score=40.85 Aligned_cols=26 Identities=19% Similarity=0.248 Sum_probs=21.6
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
.|||+||. ++|++|+|+|. ++||.+.
T Consensus 11 ~aGl~aA~~l~~~g~~v~li~~--~~gG~~~ 39 (310)
T 1fl2_A 11 PAGAAAAIYSARKGIRTGLMGE--RFGGQIL 39 (310)
T ss_dssp HHHHHHHHHHHTTTCCEEEECS--STTGGGG
T ss_pred HHHHHHHHHHHHCCCcEEEEeC--CCCceec
Confidence 49999987 57999999985 6899864
No 172
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=80.59 E-value=1 Score=44.19 Aligned_cols=40 Identities=15% Similarity=0.163 Sum_probs=27.1
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCc
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIH 346 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~ 346 (350)
.+.+.+.+.|. .|++|++|++|++|+.++-.+.+...||.
T Consensus 273 ~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~ 313 (502)
T 4g6h_A 273 KLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGK 313 (502)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSC
T ss_pred HHHHHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcc
Confidence 46666677777 89999999999999643222344445554
No 173
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=80.44 E-value=0.68 Score=47.17 Aligned_cols=28 Identities=7% Similarity=-0.128 Sum_probs=22.4
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCCCcc
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRLGGW 109 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drvGGR 109 (350)
+++|||+||+ ++|.+|+|+|+....||.
T Consensus 13 gG~AGL~AAl~aae~G~~V~vlEK~~~~~g~ 43 (660)
T 2bs2_A 13 GGLAGLRAAVATQQKGLSTIVLSLIPVKRSH 43 (660)
T ss_dssp CSHHHHHHHHHHHTTTCCEEEECSSCGGGSG
T ss_pred chHHHHHHHHHHHHCCCcEEEEeccCCCCCc
Confidence 3459999998 569999999998766554
No 174
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=80.39 E-value=0.6 Score=43.69 Aligned_cols=24 Identities=13% Similarity=-0.085 Sum_probs=20.0
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCC
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSR 105 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~dr 105 (350)
++++||++|. ++|++|+|+|+.+.
T Consensus 10 aG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 10 AGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4459999997 57999999999874
No 175
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=80.26 E-value=0.88 Score=45.08 Aligned_cols=26 Identities=8% Similarity=-0.144 Sum_probs=21.6
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCc
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGG 108 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGG 108 (350)
+++||++|. ++|.+|+|+|+.+.+++
T Consensus 35 GpaGl~~A~~La~~G~~V~vlEr~~~~~~ 63 (549)
T 2r0c_A 35 GPVGMALALDLAHRQVGHLVVEQTDGTIT 63 (549)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECSSCSCCS
T ss_pred CHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 349999997 67999999999987653
No 176
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=80.25 E-value=0.68 Score=44.96 Aligned_cols=37 Identities=5% Similarity=0.069 Sum_probs=26.1
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeC
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQ 343 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~ 343 (350)
.+.+.+.+.+. .|++|+++++|++|..+++.+.|.+.
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~ 265 (480)
T 3cgb_A 228 DMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETD 265 (480)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEET
T ss_pred HHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEEC
Confidence 35566677776 78999999999999875322345444
No 177
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=80.17 E-value=2.5 Score=42.02 Aligned_cols=44 Identities=9% Similarity=0.154 Sum_probs=36.6
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeE-EEEeCCCceec
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGV-KAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv-~V~~~~G~~~~ 349 (350)
..+.+.|.+.+. .|++|+++++|++|..+++++ .|++.+|++++
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~ 265 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIK 265 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEE
Confidence 557888888887 789999999999999987764 58888888664
No 178
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=79.97 E-value=0.86 Score=44.28 Aligned_cols=27 Identities=26% Similarity=0.205 Sum_probs=22.0
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCCCcc
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRLGGW 109 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drvGGR 109 (350)
+++|||+||+ ++|.+|+|+|+. ..||.
T Consensus 7 ~G~AGl~aA~~la~~G~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 7 SGIAGLSAGVALRRAGKKVTLISKR-IDGGS 36 (472)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSS-TTCSS
T ss_pred CCHHHHHHHHHHHHCCCCEEEEeCC-CCCch
Confidence 4559999998 579999999998 66664
No 179
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=79.91 E-value=1.8 Score=40.48 Aligned_cols=44 Identities=11% Similarity=-0.031 Sum_probs=36.8
Q ss_pred HHHHHHHHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 305 LQTIVNTLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 305 ~~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
...+.+.|.+.+. |++|+++++|++|+.++++|.|++.+|++++
T Consensus 98 ~~~l~~~L~~~~~-~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ 141 (397)
T 2vou_A 98 YDSIYGGLYELFG-PERYHTSKCLVGLSQDSETVQMRFSDGTKAE 141 (397)
T ss_dssp HHHHHHHHHHHHC-STTEETTCCEEEEEECSSCEEEEETTSCEEE
T ss_pred HHHHHHHHHHhCC-CcEEEcCCEEEEEEecCCEEEEEECCCCEEE
Confidence 4567777777774 7899999999999999889999999987654
No 180
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=79.75 E-value=0.82 Score=39.66 Aligned_cols=24 Identities=17% Similarity=0.051 Sum_probs=19.6
Q ss_pred hhHhHhhh---cCCCCEEEEecCC-CCC
Q psy7666 84 IRILCTVL---RISTPITLLESSS-RLG 107 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~d-rvG 107 (350)
.+||++|. +.|.+|+|+|++. ++|
T Consensus 13 ~aGl~aA~~la~~g~~v~lie~~~~~~G 40 (232)
T 2cul_A 13 FSGAETAFWLAQKGVRVGLLTQSLDAVM 40 (232)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred HHHHHHHHHHHHCCCCEEEEecCCCcCC
Confidence 39999987 6799999999984 444
No 181
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=79.53 E-value=0.71 Score=44.33 Aligned_cols=32 Identities=9% Similarity=0.144 Sum_probs=23.4
Q ss_pred ceeehh----hHhHhhh---cC--CCCEEEEecCCCCCcce
Q psy7666 79 LLLLVI----RILCTVL---RI--STPITLLESSSRLGGWV 110 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~--G~~VtVlEa~drvGGRi 110 (350)
++|+|| |||+||. +. |++|+|+|+.+.+|+.-
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~ 44 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAP 44 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---
T ss_pred CcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCC
Confidence 446555 9999987 33 89999999999887654
No 182
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=78.90 E-value=0.97 Score=45.09 Aligned_cols=36 Identities=3% Similarity=-0.035 Sum_probs=28.5
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeE-EEE
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGV-KAV 341 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv-~V~ 341 (350)
..++.++++.+. .|++|+.+++|++|..+++++ .|+
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~ 225 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVK 225 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEE
Confidence 357777877777 889999999999999987763 344
No 183
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=78.79 E-value=1.1 Score=42.32 Aligned_cols=44 Identities=11% Similarity=0.086 Sum_probs=35.2
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeE-EEEeCCCceec
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGV-KAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv-~V~~~~G~~~~ 349 (350)
..+.+.+.+.+. .|++|+++++|++|..+++++ .|++.+|+++.
T Consensus 184 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~ 229 (404)
T 3fg2_P 184 PEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLP 229 (404)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEE
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEE
Confidence 446667777776 789999999999999887765 58888887764
No 184
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=78.66 E-value=3.2 Score=38.70 Aligned_cols=43 Identities=12% Similarity=0.094 Sum_probs=35.6
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
.+.+.+.+.+. .|++|+++++|++|+.+++++.|++.+|+++.
T Consensus 188 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~ 231 (384)
T 2v3a_A 188 AAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIP 231 (384)
T ss_dssp HHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEE
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEE
Confidence 45667777776 78999999999999988888889888887653
No 185
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=78.59 E-value=2.3 Score=39.83 Aligned_cols=43 Identities=12% Similarity=0.003 Sum_probs=35.6
Q ss_pred HHHHHHHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 306 QTIVNTLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
..+.+.|.+.+.. ++|+++++|++|+.++++|.|++.+|++++
T Consensus 127 ~~l~~~L~~~~~~-~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ 169 (407)
T 3rp8_A 127 AELQREMLDYWGR-DSVQFGKRVTRCEEDADGVTVWFTDGSSAS 169 (407)
T ss_dssp HHHHHHHHHHHCG-GGEEESCCEEEEEEETTEEEEEETTSCEEE
T ss_pred HHHHHHHHHhCCc-CEEEECCEEEEEEecCCcEEEEEcCCCEEe
Confidence 4466677777753 689999999999999999999999998764
No 186
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=78.37 E-value=0.7 Score=44.34 Aligned_cols=30 Identities=10% Similarity=0.030 Sum_probs=25.3
Q ss_pred CCCEEEeCcceeEEEEeCCeEEEEeC---CCce
Q psy7666 318 NKVEVKMDTTCTNLEFLEKGVKAVDQ---PIHQ 347 (350)
Q Consensus 318 ~g~~I~l~~~V~~I~~~~~gv~V~~~---~G~~ 347 (350)
.|++|+++++|++|+.+++++.|+.. +|+.
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~ 361 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGEL 361 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCE
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCe
Confidence 47899999999999999888888776 6664
No 187
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=78.20 E-value=2.8 Score=34.26 Aligned_cols=37 Identities=11% Similarity=0.088 Sum_probs=30.0
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCC
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPI 345 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G 345 (350)
+.+.+.+.+. .|++|+++ +|++|+.+++++.|++.+|
T Consensus 58 ~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g 95 (180)
T 2ywl_A 58 LLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG 95 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC
T ss_pred HHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC
Confidence 5555666665 67999999 9999999877888988887
No 188
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=78.00 E-value=0.83 Score=45.14 Aligned_cols=43 Identities=5% Similarity=0.125 Sum_probs=33.0
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEe-------------------CCeEEEEeCCCceec
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFL-------------------EKGVKAVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~-------------------~~gv~V~~~~G~~~~ 349 (350)
.+.+.+.+.+. .|++|++++.|++|..+ ++++.++..+|+++.
T Consensus 193 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~ 255 (565)
T 3ntd_A 193 EMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLE 255 (565)
T ss_dssp HHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEE
Confidence 35556666666 78999999999999883 567888888887653
No 189
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=77.84 E-value=1.2 Score=46.34 Aligned_cols=40 Identities=20% Similarity=0.040 Sum_probs=33.9
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeE-EEEeCCC
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGV-KAVDQPI 345 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv-~V~~~~G 345 (350)
..+.++|++.+. .|++|+++++|++|..+++++ .|.+.+|
T Consensus 151 ~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G 192 (830)
T 1pj5_A 151 ARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG 192 (830)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE
T ss_pred HHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc
Confidence 468888988888 899999999999999988875 5777776
No 190
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=77.77 E-value=1.1 Score=44.74 Aligned_cols=42 Identities=7% Similarity=0.053 Sum_probs=28.0
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEe------C---CeEEEE--eCCCcee
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFL------E---KGVKAV--DQPIHQM 348 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~------~---~gv~V~--~~~G~~~ 348 (350)
.+.+.+.+.+. .|++|++++.|++|... + +++.|+ ..+|+++
T Consensus 327 ~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~ 380 (598)
T 2x8g_A 327 QMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKF 380 (598)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEE
T ss_pred HHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEE
Confidence 35566666666 78999999999888653 2 345444 4566554
No 191
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=77.14 E-value=1 Score=43.19 Aligned_cols=38 Identities=3% Similarity=0.056 Sum_probs=25.8
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
+.+.+.+.+. .|++|++++.|+++.. + .|+..+|+++.
T Consensus 190 ~~~~~~~~l~~~gV~i~~~~~v~~~~~--~--~v~~~~g~~~~ 228 (437)
T 4eqs_A 190 MNQPILDELDKREIPYRLNEEINAING--N--EITFKSGKVEH 228 (437)
T ss_dssp GGHHHHHHHHHTTCCEEESCCEEEEET--T--EEEETTSCEEE
T ss_pred hHHHHHHHhhccceEEEeccEEEEecC--C--eeeecCCeEEe
Confidence 4455666666 7899999999998742 2 35556666543
No 192
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=77.10 E-value=1.2 Score=44.44 Aligned_cols=25 Identities=12% Similarity=-0.291 Sum_probs=20.9
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCC
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLG 107 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvG 107 (350)
+++||++|. ++|++|+|+|+.+..+
T Consensus 58 G~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 58 GPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 349999997 6799999999987654
No 193
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=77.03 E-value=3.2 Score=38.56 Aligned_cols=29 Identities=24% Similarity=0.356 Sum_probs=22.8
Q ss_pred ceeehh----hHhHhhh---c-CC-CCEEEEecCCCCCc
Q psy7666 79 LLLLVI----RILCTVL---R-IS-TPITLLESSSRLGG 108 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~-~G-~~VtVlEa~drvGG 108 (350)
.+|+|| +||++|+ + +| ++|+|+|+.+ +||
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~-~~~ 59 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW-LAG 59 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS-TTC
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC-CCC
Confidence 345554 9999997 6 79 9999999988 554
No 194
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=76.61 E-value=1 Score=43.23 Aligned_cols=40 Identities=20% Similarity=0.217 Sum_probs=27.7
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeE-EEEeCCCcee
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGV-KAVDQPIHQM 348 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv-~V~~~~G~~~ 348 (350)
.+.+.+.+.+. .|++|+++++|++|..+ +++ .|+. +|+++
T Consensus 192 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i 233 (447)
T 1nhp_A 192 EFTDVLTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAY 233 (447)
T ss_dssp HHHHHHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEE
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEE
Confidence 35566777776 78999999999999865 433 4554 34443
No 195
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=76.27 E-value=2.6 Score=39.42 Aligned_cols=43 Identities=19% Similarity=-0.021 Sum_probs=35.1
Q ss_pred HHHHHHHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 306 QTIVNTLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
..|.+.|.+.+. +++|+++++|++|+.++++|.|++.+|++++
T Consensus 128 ~~l~~~L~~~~~-~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ 170 (398)
T 2xdo_A 128 NDLRAILLNSLE-NDTVIWDRKLVMLEPGKKKWTLTFENKPSET 170 (398)
T ss_dssp HHHHHHHHHTSC-TTSEEESCCEEEEEECSSSEEEEETTSCCEE
T ss_pred HHHHHHHHhhcC-CCEEEECCEEEEEEECCCEEEEEECCCcEEe
Confidence 446677777775 4689999999999998888999999887654
No 196
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=76.12 E-value=1.3 Score=43.80 Aligned_cols=42 Identities=10% Similarity=0.042 Sum_probs=31.7
Q ss_pred HHHHHHHHhhc-C-CCEEEeCcceeEEEEeCCe--EEEEeCCCceec
Q psy7666 307 TIVNTLGEHLS-N-KVEVKMDTTCTNLEFLEKG--VKAVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~-~-g~~I~l~~~V~~I~~~~~g--v~V~~~~G~~~~ 349 (350)
.+.+.|.+.+. . |++|+++ +|++|..++++ +.|++.+|++++
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ 240 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFD 240 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEE
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEE
Confidence 46666666665 4 8999999 99999987655 678888887654
No 197
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=74.98 E-value=1.6 Score=42.90 Aligned_cols=31 Identities=23% Similarity=0.314 Sum_probs=24.8
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
.+|+|| |||+||. ++|++|+|+|+ ++||.+.
T Consensus 213 ~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~ 250 (521)
T 1hyu_A 213 YDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVL 250 (521)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGT
T ss_pred ccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccc
Confidence 446655 9999987 57999999985 6899865
No 198
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=74.53 E-value=1.8 Score=35.40 Aligned_cols=23 Identities=17% Similarity=0.183 Sum_probs=19.0
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCC
Q psy7666 84 IRILCTVL---RISTPITLLESSSRL 106 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drv 106 (350)
.+||.+|. +.|.+|+|+|+++..
T Consensus 11 ~~Gl~~A~~l~~~g~~v~lie~~~~~ 36 (180)
T 2ywl_A 11 PSGLSAALFLARAGLKVLVLDGGRSK 36 (180)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCT
T ss_pred HHHHHHHHHHHHCCCcEEEEeCCCCc
Confidence 38888886 679999999998843
No 199
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=74.38 E-value=4.1 Score=39.15 Aligned_cols=29 Identities=21% Similarity=0.311 Sum_probs=20.3
Q ss_pred ceeehh----hHhHhhh---cC--CCCEEEEecCCCCC
Q psy7666 79 LLLLVI----RILCTVL---RI--STPITLLESSSRLG 107 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~--G~~VtVlEa~drvG 107 (350)
++|+|| |||+||. ++ |++|+|+|+++.+|
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 446555 9999997 34 89999999999876
No 200
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=74.22 E-value=1.1 Score=43.67 Aligned_cols=42 Identities=14% Similarity=0.143 Sum_probs=32.2
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCe--EEEEeCCCceec
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG--VKAVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g--v~V~~~~G~~~~ 349 (350)
.+.+.|.+.+. .|++|+.+ +|++|..++++ +.|++.+|++++
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ 218 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEIS 218 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEE
Confidence 46666666666 68999999 99999986655 678888886654
No 201
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=73.86 E-value=3.7 Score=39.84 Aligned_cols=27 Identities=19% Similarity=0.251 Sum_probs=22.7
Q ss_pred hhHhHhhh---cC---CCCEEEEecCCCCCcceE
Q psy7666 84 IRILCTVL---RI---STPITLLESSSRLGGWVR 111 (350)
Q Consensus 84 iaGLaaA~---~~---G~~VtVlEa~drvGGRi~ 111 (350)
++|++||. ++ |++|+|+|+.+ +||.+.
T Consensus 12 ~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~ 44 (499)
T 1xdi_A 12 PAGYEAALVAATSHPETTQVTVIDCDG-IGGAAV 44 (499)
T ss_dssp HHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHH
T ss_pred HHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCccc
Confidence 39999987 45 99999999988 999653
No 202
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=73.85 E-value=1.4 Score=42.32 Aligned_cols=41 Identities=7% Similarity=0.166 Sum_probs=30.6
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEE-EEeCCCcee
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVK-AVDQPIHQM 348 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~-V~~~~G~~~ 348 (350)
.+.+.+.+.+. .|++|+++++|++|..+++++. |+. +|+++
T Consensus 192 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i 234 (452)
T 2cdu_A 192 EFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEI 234 (452)
T ss_dssp HHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEE
T ss_pred hHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEE
Confidence 36666777776 7899999999999997666665 444 66554
No 203
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=73.80 E-value=1.6 Score=41.90 Aligned_cols=28 Identities=14% Similarity=0.133 Sum_probs=22.4
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
.||+.||+ ++|++|+|+|++...+.-++
T Consensus 11 ~AG~~AA~~la~~G~~V~liE~~~~~~tp~h 41 (443)
T 3g5s_A 11 LAGSEAAWTLLRLGVPVRLFEMRPKRMTPAH 41 (443)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCTTTSCCSSC
T ss_pred HHHHHHHHHHHHCCCcEEEEeccCCcCCccc
Confidence 39999987 67999999999886655544
No 204
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=73.77 E-value=1.6 Score=42.76 Aligned_cols=41 Identities=17% Similarity=0.171 Sum_probs=26.3
Q ss_pred HHHHHHHhhc--CCCEEEeCcceeEEEEeCCe--EEEEeCCCceec
Q psy7666 308 IVNTLGEHLS--NKVEVKMDTTCTNLEFLEKG--VKAVDQPIHQMT 349 (350)
Q Consensus 308 L~~aLa~~L~--~g~~I~l~~~V~~I~~~~~g--v~V~~~~G~~~~ 349 (350)
+.+.|.+.+. .|++|+.+ .|++|..++++ +.|++.+|.+++
T Consensus 177 l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ 221 (526)
T 2pyx_A 177 FSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEIS 221 (526)
T ss_dssp HHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEE
T ss_pred HHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEE
Confidence 4444444443 37889998 59999887554 467777766553
No 205
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=73.36 E-value=1.7 Score=42.80 Aligned_cols=43 Identities=9% Similarity=0.182 Sum_probs=31.2
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCe--EEEEeCCCceec
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG--VKAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g--v~V~~~~G~~~~ 349 (350)
..+.+.|.+.+. .|++++.+ +|++|..++++ +.|++.+|++++
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ 210 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLE 210 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEE
Confidence 345666666665 68999999 89999886554 578888886554
No 206
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=73.14 E-value=4 Score=39.76 Aligned_cols=40 Identities=18% Similarity=-0.030 Sum_probs=31.7
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCc
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIH 346 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~ 346 (350)
.+.+.|.+.+. .|++|+++++|++|+.++++|+|+..+|.
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~ 148 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPD 148 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSS
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCC
Confidence 35555555555 57999999999999999889988887764
No 207
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=73.10 E-value=3.3 Score=40.07 Aligned_cols=31 Identities=23% Similarity=0.283 Sum_probs=26.0
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
+|+|| +||+||. ++|++|+|+|+ +++||.+.
T Consensus 28 DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~ 65 (484)
T 3o0h_A 28 DLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCV 65 (484)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHH
T ss_pred CEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCcee
Confidence 46665 9999997 57999999999 79999754
No 208
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=72.73 E-value=4.2 Score=39.64 Aligned_cols=40 Identities=10% Similarity=0.015 Sum_probs=31.5
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCc
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIH 346 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~ 346 (350)
.+.+.|.+.+. .|++|+++++|++|+.++++|+|+..+|.
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~ 147 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPE 147 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCC
Confidence 35555555555 57999999999999999999988877664
No 209
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=72.72 E-value=5.7 Score=37.35 Aligned_cols=44 Identities=9% Similarity=0.003 Sum_probs=34.7
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeE-EEEeCCCceec
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGV-KAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv-~V~~~~G~~~~ 349 (350)
..+.+.+.+.+. .|++|+++++|++|..+++++ .|++.+|+++.
T Consensus 194 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~ 239 (415)
T 3lxd_A 194 EALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIP 239 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEE
Confidence 346666667776 789999999999999876665 68888887664
No 210
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=72.63 E-value=2.5 Score=42.62 Aligned_cols=23 Identities=9% Similarity=-0.091 Sum_probs=19.9
Q ss_pred hhHhHhhh---c-CCCCEEEEecCCCC
Q psy7666 84 IRILCTVL---R-ISTPITLLESSSRL 106 (350)
Q Consensus 84 iaGLaaA~---~-~G~~VtVlEa~drv 106 (350)
++||++|. + .|.+|+|+|+++..
T Consensus 42 paGL~~A~~La~~~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 42 PAGLTLAAQLAAFPDIRTCIVEQKEGP 68 (639)
T ss_dssp HHHHHHHHHHTTCTTSCEEEECSSSSC
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 49999987 6 79999999998765
No 211
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=72.55 E-value=1.7 Score=40.68 Aligned_cols=32 Identities=3% Similarity=-0.088 Sum_probs=28.4
Q ss_pred CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 318 NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 318 ~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
.|++|++++.|+.|+.++++..|.+.+|+++.
T Consensus 215 ~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~ 246 (401)
T 3vrd_B 215 ALIEWHPGPDAAVVKTDTEAMTVETSFGETFK 246 (401)
T ss_dssp CSEEEECTTTTCEEEEETTTTEEEETTSCEEE
T ss_pred cCcEEEeCceEEEEEecccceEEEcCCCcEEE
Confidence 68999999999999998888889999998764
No 212
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=71.97 E-value=2 Score=40.52 Aligned_cols=31 Identities=0% Similarity=-0.054 Sum_probs=24.0
Q ss_pred ceeehh----hHhHhhh---cCCCC--EEEEecCCCCCcc
Q psy7666 79 LLLLVI----RILCTVL---RISTP--ITLLESSSRLGGW 109 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~--VtVlEa~drvGGR 109 (350)
++|+|| |||+||. ++|++ |+|+|+.+..+..
T Consensus 10 ~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~ 49 (415)
T 3lxd_A 10 ADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYE 49 (415)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBC
T ss_pred CcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcC
Confidence 456655 9999987 57877 9999999876643
No 213
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=71.57 E-value=7 Score=36.62 Aligned_cols=25 Identities=12% Similarity=0.060 Sum_probs=20.8
Q ss_pred hhHhHhhh---cCCC--CEEEEecCCCCCc
Q psy7666 84 IRILCTVL---RIST--PITLLESSSRLGG 108 (350)
Q Consensus 84 iaGLaaA~---~~G~--~VtVlEa~drvGG 108 (350)
+|||+||. ++|+ +|+|+|+.+..+.
T Consensus 11 ~aGl~aA~~L~~~g~~~~V~lie~~~~~~y 40 (404)
T 3fg2_P 11 HAGFQVAVSLRQAKYPGRIALINDEKHLPY 40 (404)
T ss_dssp HHHHHHHHHHHHTTCCSCEEEECCSSSSSB
T ss_pred HHHHHHHHHHHhhCcCCCEEEEeCCCCCCC
Confidence 39999987 5788 8999999987654
No 214
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=71.37 E-value=2.1 Score=42.41 Aligned_cols=41 Identities=7% Similarity=-0.085 Sum_probs=35.8
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCcee
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQM 348 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~ 348 (350)
+.+.+.+.|. .|+++++++.|+++...++++.|...++.+.
T Consensus 265 i~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~ 306 (542)
T 4b1b_A 265 CAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSE 306 (542)
T ss_dssp HHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEE
T ss_pred HHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeE
Confidence 6777777887 8999999999999999999999988887765
No 215
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=71.23 E-value=2.4 Score=40.09 Aligned_cols=42 Identities=14% Similarity=0.018 Sum_probs=32.0
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
+.+.+.+.+. .|++|+++++|++|..++....|+..+|+++.
T Consensus 187 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~ 229 (410)
T 3ef6_A 187 IGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFV 229 (410)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEE
Confidence 4555566665 68999999999999876654578888887764
No 216
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=70.76 E-value=3.7 Score=38.85 Aligned_cols=45 Identities=11% Similarity=0.164 Sum_probs=35.6
Q ss_pred ecCcHHHHHHHHHHhhc-CCCEEEeCcceeEEEEe----CCeEEEEeCCC
Q psy7666 301 VEGGLQTIVNTLGEHLS-NKVEVKMDTTCTNLEFL----EKGVKAVDQPI 345 (350)
Q Consensus 301 ~~GG~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~----~~gv~V~~~~G 345 (350)
+......+.+.|.+.+. .|++|+++++|++|..+ +++|.|++.+|
T Consensus 104 p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g 153 (401)
T 2gqf_A 104 CDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST 153 (401)
T ss_dssp ETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE
T ss_pred cCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC
Confidence 33345668888888887 78999999999999987 56788887766
No 217
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=70.61 E-value=1.5 Score=44.17 Aligned_cols=27 Identities=11% Similarity=0.038 Sum_probs=21.4
Q ss_pred ehhhHhHhhh---cCC--CCEEEEecCCCCCc
Q psy7666 82 LVIRILCTVL---RIS--TPITLLESSSRLGG 108 (350)
Q Consensus 82 ~viaGLaaA~---~~G--~~VtVlEa~drvGG 108 (350)
+++|||+||+ ++| .+|+|+|+....+|
T Consensus 13 ~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~ 44 (602)
T 1kf6_A 13 AGGAGLRAAIAAAQANPNAKIALISKVYPMRS 44 (602)
T ss_dssp CSHHHHHHHHHHHHHCTTCCEEEEESSCGGGS
T ss_pred CCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCC
Confidence 3459999998 458 99999999876544
No 218
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=70.46 E-value=5 Score=38.31 Aligned_cols=27 Identities=15% Similarity=0.273 Sum_probs=23.9
Q ss_pred hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 85 RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 85 aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
|||+||. +.|++|+|+|+.+.+||.+.
T Consensus 12 aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 41 (455)
T 2yqu_A 12 GGYVAAIRAAQLGMKVGVVEKEKALGGTCL 41 (455)
T ss_dssp HHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred hHHHHHHHHHHCCCeEEEEeCCCCCCCccc
Confidence 9999987 57999999999999999753
No 219
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=68.79 E-value=4.2 Score=37.55 Aligned_cols=36 Identities=11% Similarity=-0.021 Sum_probs=28.2
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEE-EEe
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVK-AVD 342 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~-V~~ 342 (350)
.+.+.|.+.+. .|++|+++++|++|..++++|. |++
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~ 140 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKI 140 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEE
Confidence 45566666665 6899999999999999888776 665
No 220
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=68.66 E-value=4.3 Score=37.53 Aligned_cols=41 Identities=17% Similarity=0.235 Sum_probs=33.3
Q ss_pred HHHHHHHHhhcCCCEEEeCcceeEEEEeCC-eEEEEeCCCceec
Q psy7666 307 TIVNTLGEHLSNKVEVKMDTTCTNLEFLEK-GVKAVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~-gv~V~~~~G~~~~ 349 (350)
.|.+.|.+.++ ++|+++++|++++..++ +|+|+++||++++
T Consensus 113 ~L~~~L~~~~~--~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~ 154 (412)
T 4hb9_A 113 ELKEILNKGLA--NTIQWNKTFVRYEHIENGGIKIFFADGSHEN 154 (412)
T ss_dssp HHHHHHHTTCT--TTEECSCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred HHHHHHHhhcc--ceEEEEEEEEeeeEcCCCeEEEEECCCCEEE
Confidence 46666777775 68999999999998755 5999999998765
No 221
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=68.59 E-value=2.3 Score=43.13 Aligned_cols=29 Identities=17% Similarity=0.071 Sum_probs=22.7
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCC-CCCc
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSS-RLGG 108 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~d-rvGG 108 (350)
+|+|| ||++||+ +.|.+|+|+|+.. .+|+
T Consensus 23 DVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 23 DVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 45555 9999987 5799999999985 5665
No 222
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=68.14 E-value=2.7 Score=40.73 Aligned_cols=39 Identities=8% Similarity=0.240 Sum_probs=27.3
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCeE-EEEeCCCcee
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGV-KAVDQPIHQM 348 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv-~V~~~~G~~~ 348 (350)
+.+.+.+.+. .|++|+++++|++|.. ++++ .|.. +|+++
T Consensus 238 ~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i 278 (490)
T 2bc0_A 238 LTDLMAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEY 278 (490)
T ss_dssp HHHHHHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEE
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEE
Confidence 5566777776 7899999999999986 3433 3444 55544
No 223
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=67.64 E-value=7.7 Score=37.61 Aligned_cols=43 Identities=9% Similarity=-0.010 Sum_probs=34.5
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
.+.+.+.+.+. .|++|++++.|++|..+++++.|+..+|+++.
T Consensus 227 ~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~ 270 (493)
T 1m6i_A 227 YLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVE 270 (493)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEE
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEE
Confidence 35556666776 78999999999999987777888888887653
No 224
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=67.57 E-value=6.3 Score=38.54 Aligned_cols=33 Identities=12% Similarity=0.017 Sum_probs=27.3
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
.+|+|| +||+||. +.|++|+|+|+.+.+||.+.
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 83 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCP 83 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCccc
Confidence 456665 9999987 57999999999988999754
No 225
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=67.48 E-value=5.2 Score=39.07 Aligned_cols=39 Identities=13% Similarity=0.061 Sum_probs=31.9
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCC----eEEEEeCCC
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEK----GVKAVDQPI 345 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~----gv~V~~~~G 345 (350)
.+.+.|.+.+. .|++|+++++|++|+.+++ +|.|+..++
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~ 164 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGP 164 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEET
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcC
Confidence 45566666666 6899999999999999988 888887766
No 226
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=67.44 E-value=7.9 Score=37.12 Aligned_cols=32 Identities=28% Similarity=0.342 Sum_probs=26.0
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
.+|+|| +||+||. +.|++|+|+|+. .+||.+.
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCV 43 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCc
Confidence 456666 9999987 579999999997 7899754
No 227
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=67.41 E-value=2.2 Score=41.58 Aligned_cols=29 Identities=10% Similarity=0.212 Sum_probs=22.9
Q ss_pred ceeehh----hHhHhhh---c--CCCCEEEEecCCCCC
Q psy7666 79 LLLLVI----RILCTVL---R--ISTPITLLESSSRLG 107 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~--~G~~VtVlEa~drvG 107 (350)
.+|+|| |||+||. + .|.+|+|+|+.+.+|
T Consensus 12 ~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 12 VPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp EEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 456666 9999995 2 389999999998765
No 228
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=66.34 E-value=6.5 Score=36.69 Aligned_cols=40 Identities=18% Similarity=0.287 Sum_probs=30.9
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCe--EEEEeCCCc
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG--VKAVDQPIH 346 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g--v~V~~~~G~ 346 (350)
.+.+.|.+.+. .|++|+++++|++|..++++ +.|.+.+|+
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~ 149 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGN 149 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCC
Confidence 35556666655 57999999999999998776 466668887
No 229
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=65.99 E-value=2.6 Score=42.60 Aligned_cols=26 Identities=12% Similarity=0.162 Sum_probs=20.9
Q ss_pred hhhHhHhhh---cCCCCEEEEecCC-CCCc
Q psy7666 83 VIRILCTVL---RISTPITLLESSS-RLGG 108 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~d-rvGG 108 (350)
+.||++||+ +.|.+|+|+|++. .+|+
T Consensus 36 G~AGl~AAlalAr~G~kVlLIEk~~~~iG~ 65 (637)
T 2zxi_A 36 GHAGIEAALAAARMGAKTAMFVLNADTIGQ 65 (637)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CHHHHHHHHHHHHCCCCEEEEEecccccCC
Confidence 349999987 5799999999984 5664
No 230
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=65.84 E-value=6.9 Score=37.03 Aligned_cols=26 Identities=12% Similarity=0.127 Sum_probs=20.6
Q ss_pred hhhHhHhhh---cCC-CCEEEEecCCCCCc
Q psy7666 83 VIRILCTVL---RIS-TPITLLESSSRLGG 108 (350)
Q Consensus 83 viaGLaaA~---~~G-~~VtVlEa~drvGG 108 (350)
+++||++|+ ++| ++|+|+|+.+.+|+
T Consensus 32 GiaGls~A~~La~~G~~~V~vlE~~~~~~~ 61 (448)
T 3axb_A 32 GVVGLAAAYYLKVWSGGSVLVVDAGHAPGS 61 (448)
T ss_dssp SHHHHHHHHHHHHHHCSCEEEEESSSSTTC
T ss_pred CHHHHHHHHHHHhCCCCcEEEEccCCCCCC
Confidence 349999998 568 99999999556654
No 231
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=65.55 E-value=2.5 Score=42.99 Aligned_cols=23 Identities=17% Similarity=0.148 Sum_probs=18.8
Q ss_pred hhhHhHhhh---cC------CCCEEEEecCCC
Q psy7666 83 VIRILCTVL---RI------STPITLLESSSR 105 (350)
Q Consensus 83 viaGLaaA~---~~------G~~VtVlEa~dr 105 (350)
++|||+||+ ++ |.+|+|+|+...
T Consensus 31 G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 31 GMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp SHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred CHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 449999998 33 999999999754
No 232
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=65.21 E-value=2.2 Score=40.70 Aligned_cols=35 Identities=14% Similarity=0.187 Sum_probs=24.4
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEe
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVD 342 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~ 342 (350)
..+.+.+.+.+. .|++++++++|++|+ ++++.+..
T Consensus 208 ~~~~~~~~~~l~~~gI~~~~~~~v~~v~--~~~v~~~~ 243 (437)
T 3sx6_A 208 GDSKGILTKGLKEEGIEAYTNCKVTKVE--DNKMYVTQ 243 (437)
T ss_dssp TTHHHHHHHHHHHTTCEEECSEEEEEEE--TTEEEEEE
T ss_pred hHHHHHHHHHHHHCCCEEEcCCEEEEEE--CCeEEEEe
Confidence 345555666666 789999999999995 34555543
No 233
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=65.19 E-value=8.2 Score=40.08 Aligned_cols=25 Identities=16% Similarity=-0.145 Sum_probs=20.6
Q ss_pred ehhhHhHhhh---cCCC-CEEEEecCCCC
Q psy7666 82 LVIRILCTVL---RIST-PITLLESSSRL 106 (350)
Q Consensus 82 ~viaGLaaA~---~~G~-~VtVlEa~drv 106 (350)
++|+||++|+ ++|+ +|+|+|+.+..
T Consensus 12 gGi~Gls~A~~La~~G~~~V~vlE~~~~~ 40 (830)
T 1pj5_A 12 AGIVGTNLADELVTRGWNNITVLDQGPLN 40 (830)
T ss_dssp CSHHHHHHHHHHHHTTCCCEEEECSSCTT
T ss_pred cCHHHHHHHHHHHhCCCCcEEEEeCCCCC
Confidence 3459999998 6798 99999998764
No 234
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=64.32 E-value=3.2 Score=38.63 Aligned_cols=25 Identities=12% Similarity=0.232 Sum_probs=19.9
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEE
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLE 332 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~ 332 (350)
+.+.+.+.+. .|++|+++++|++|+
T Consensus 185 ~~~~l~~~l~~~gV~i~~~~~v~~i~ 210 (367)
T 1xhc_A 185 LSNMIKDMLEETGVKFFLNSELLEAN 210 (367)
T ss_dssp HHHHHHHHHHHTTEEEECSCCEEEEC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEE
Confidence 5556666666 789999999999986
No 235
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=64.25 E-value=3.4 Score=41.74 Aligned_cols=24 Identities=13% Similarity=-0.074 Sum_probs=19.4
Q ss_pred ehhhHhHhhh--c-----CCCCEEEEecCCC
Q psy7666 82 LVIRILCTVL--R-----ISTPITLLESSSR 105 (350)
Q Consensus 82 ~viaGLaaA~--~-----~G~~VtVlEa~dr 105 (350)
+++|||+||+ . +|.+|+|+|+.+.
T Consensus 30 ~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 30 GGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp CSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 3449999987 4 4999999999874
No 236
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=63.28 E-value=8.7 Score=36.58 Aligned_cols=30 Identities=17% Similarity=0.405 Sum_probs=24.1
Q ss_pred ceeehh----hHhHhhh---cC--CCCEEEEecCCCCCc
Q psy7666 79 LLLLVI----RILCTVL---RI--STPITLLESSSRLGG 108 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~--G~~VtVlEa~drvGG 108 (350)
++|+|| |||+||. ++ |++|+|+|+++.+|.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~ 41 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGY 41 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcc
Confidence 346555 9999997 34 899999999999883
No 237
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=62.90 E-value=11 Score=36.40 Aligned_cols=23 Identities=22% Similarity=-0.025 Sum_probs=17.9
Q ss_pred ehhhHhHhhh---c---CCCCEEEEecCC
Q psy7666 82 LVIRILCTVL---R---ISTPITLLESSS 104 (350)
Q Consensus 82 ~viaGLaaA~---~---~G~~VtVlEa~d 104 (350)
++++|+++|. + +|.+|+|+|+.+
T Consensus 10 gG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 10 GGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred CCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 3459999987 6 899999999865
No 238
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=62.70 E-value=8.9 Score=37.08 Aligned_cols=32 Identities=22% Similarity=0.203 Sum_probs=25.7
Q ss_pred eeehh----hHhHhhh---c-CCCCEEEEe--------cCCCCCcceE
Q psy7666 80 LLLVI----RILCTVL---R-ISTPITLLE--------SSSRLGGWVR 111 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~-~G~~VtVlE--------a~drvGGRi~ 111 (350)
+|+|| +||+||. + .|++|+|+| +++++||.+.
T Consensus 5 dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~ 52 (490)
T 1fec_A 5 DLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCV 52 (490)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHH
T ss_pred cEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCcccc
Confidence 45555 9999987 5 799999999 4788999653
No 239
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=62.50 E-value=3.4 Score=41.89 Aligned_cols=28 Identities=21% Similarity=0.293 Sum_probs=21.7
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCC-CCC
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSS-RLG 107 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~d-rvG 107 (350)
+|+|| ||++||+ +.|.+|+|+|++. .+|
T Consensus 30 DVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG 65 (651)
T 3ces_A 30 DVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG 65 (651)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc
Confidence 35554 9999987 5799999999974 454
No 240
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=61.80 E-value=13 Score=33.17 Aligned_cols=44 Identities=16% Similarity=0.089 Sum_probs=33.8
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
..+.+.+.+.+. .+.+++++++|++|..+++.+.|++.+|++++
T Consensus 65 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~ 109 (335)
T 2zbw_A 65 KDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYT 109 (335)
T ss_dssp HHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEE
Confidence 345666666665 56899999999999998878889888876543
No 241
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=61.62 E-value=11 Score=35.72 Aligned_cols=40 Identities=23% Similarity=0.029 Sum_probs=30.2
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEE-EEe--C-CCc
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVK-AVD--Q-PIH 346 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~-V~~--~-~G~ 346 (350)
.+.+.|.+.+. .|++|+++++|++|..++++|. |+. . +|+
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~ 145 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNE 145 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTE
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCc
Confidence 46667777766 6899999999999999888754 443 3 665
No 242
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=61.56 E-value=7.6 Score=35.83 Aligned_cols=41 Identities=10% Similarity=0.123 Sum_probs=31.1
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
..+.+.|.+.+. .|++|+++++|++|+. ++ .|++.+|++++
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ 148 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP--VG-RLTLQTGEVLE 148 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET--TT-EEEETTSCEEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-EEEECCCCEEE
Confidence 446666666666 6899999999999987 34 77778887654
No 243
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=60.73 E-value=10 Score=33.99 Aligned_cols=39 Identities=5% Similarity=0.058 Sum_probs=30.0
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEE-EEeCCC
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVK-AVDQPI 345 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~-V~~~~G 345 (350)
.+.+.+.+.+. .|.+++++++|++|..++++|. |++.+|
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g 117 (357)
T 4a9w_A 77 EVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR 117 (357)
T ss_dssp HHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC
Confidence 34444444444 4689999999999999999998 888877
No 244
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=60.71 E-value=11 Score=36.50 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=26.4
Q ss_pred ceeehh----hHhHhhh---c-CCCCEEEEe--------cCCCCCcceE
Q psy7666 79 LLLLVI----RILCTVL---R-ISTPITLLE--------SSSRLGGWVR 111 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~-~G~~VtVlE--------a~drvGGRi~ 111 (350)
.+|+|| |||+||. + +|++|+|+| +++++||.+.
T Consensus 8 ~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~ 56 (495)
T 2wpf_A 8 FDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCV 56 (495)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHH
T ss_pred cCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeee
Confidence 346666 9999987 5 799999999 4778999754
No 245
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=60.54 E-value=4.4 Score=41.15 Aligned_cols=24 Identities=8% Similarity=-0.013 Sum_probs=19.8
Q ss_pred ehhhHhHhhh---c-----CCCCEEEEecCCC
Q psy7666 82 LVIRILCTVL---R-----ISTPITLLESSSR 105 (350)
Q Consensus 82 ~viaGLaaA~---~-----~G~~VtVlEa~dr 105 (350)
++++||++|. + .|++|+|+|+++.
T Consensus 16 aGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 16 AGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp CSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred cCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 3449999987 6 8999999999754
No 246
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=60.40 E-value=12 Score=36.43 Aligned_cols=40 Identities=13% Similarity=0.080 Sum_probs=31.3
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCe---EEEEeCCCc
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG---VKAVDQPIH 346 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g---v~V~~~~G~ 346 (350)
.+.+.|.+.+. .|++|+++++|++|..++++ |.+.+.+|+
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~ 155 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGV 155 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCC
Confidence 46666766666 78999999999999998875 566667774
No 247
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=60.37 E-value=7.4 Score=36.59 Aligned_cols=29 Identities=17% Similarity=0.103 Sum_probs=23.1
Q ss_pred eeehh----hHhHhhh---cCCCC--EEEEecCCCCCc
Q psy7666 80 LLLVI----RILCTVL---RISTP--ITLLESSSRLGG 108 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~--VtVlEa~drvGG 108 (350)
+|+|| |||+||. ++|++ |+|+|+.+..+.
T Consensus 4 ~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y 41 (410)
T 3ef6_A 4 HVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPY 41 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSB
T ss_pred CEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCc
Confidence 45554 9999997 57887 999999988764
No 248
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=59.86 E-value=9 Score=36.54 Aligned_cols=32 Identities=19% Similarity=0.240 Sum_probs=25.8
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
.+|+|| +|++||. +.|++|+|+|+. .+||.+.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCV 43 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCccc
Confidence 346665 9999987 579999999997 8899753
No 249
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=58.80 E-value=8.6 Score=35.55 Aligned_cols=40 Identities=10% Similarity=-0.052 Sum_probs=30.7
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeC-CeEEEEe-CCCc
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLE-KGVKAVD-QPIH 346 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~-~gv~V~~-~~G~ 346 (350)
.+.+.|.+.+. .|++|+++++|++|..++ +++.|+. .+|+
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~ 146 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGE 146 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTE
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCc
Confidence 45566666665 689999999999998864 4577876 6776
No 250
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=58.51 E-value=11 Score=36.11 Aligned_cols=30 Identities=23% Similarity=0.249 Sum_probs=25.1
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcce
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWV 110 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi 110 (350)
+|+|| +||+||. ++|++|+|+|+ +.+||.+
T Consensus 7 DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~ 43 (463)
T 4dna_A 7 DLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTC 43 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHH
T ss_pred cEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcc
Confidence 45555 9999997 57999999999 8899965
No 251
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=58.47 E-value=5.1 Score=38.12 Aligned_cols=42 Identities=10% Similarity=0.123 Sum_probs=31.4
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEE--eCCeE-EEEeCCCceec
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEF--LEKGV-KAVDQPIHQMT 349 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~--~~~gv-~V~~~~G~~~~ 349 (350)
+.+.+.+.+. .|++|+++++|++|.. +++++ .|++.+|+++.
T Consensus 193 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~ 238 (431)
T 1q1r_A 193 VSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLP 238 (431)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEE
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEE
Confidence 5555666666 6899999999999987 44555 68888887654
No 252
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=57.74 E-value=4.5 Score=38.12 Aligned_cols=38 Identities=5% Similarity=0.076 Sum_probs=28.2
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
+.+.+.+.+. .|++|+++++|++|. + + .|++.+|+++.
T Consensus 189 ~~~~l~~~l~~~GV~i~~~~~v~~i~-~-~--~v~~~~g~~i~ 227 (408)
T 2gqw_A 189 LADFVARYHAAQGVDLRFERSVTGSV-D-G--VVLLDDGTRIA 227 (408)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEE-T-T--EEEETTSCEEE
T ss_pred HHHHHHHHHHHcCcEEEeCCEEEEEE-C-C--EEEECCCCEEE
Confidence 5556666666 789999999999998 3 3 56667776553
No 253
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=57.66 E-value=17 Score=35.71 Aligned_cols=42 Identities=10% Similarity=0.181 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhhc-CCCEEEeCcceeEEEEeC-Ce---EEEEeCCCc
Q psy7666 305 LQTIVNTLGEHLS-NKVEVKMDTTCTNLEFLE-KG---VKAVDQPIH 346 (350)
Q Consensus 305 ~~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~-~g---v~V~~~~G~ 346 (350)
-..+.+.|.+.+. .|++|+++++|++|..++ ++ |.+...+|+
T Consensus 249 ~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~ 295 (566)
T 1qo8_A 249 GPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTG 295 (566)
T ss_dssp HHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTE
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCc
Confidence 3458888888887 789999999999999887 54 445545775
No 254
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=57.63 E-value=3.4 Score=41.11 Aligned_cols=44 Identities=16% Similarity=0.080 Sum_probs=33.4
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEe--CCC-ceec
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVD--QPI-HQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~--~~G-~~~~ 349 (350)
..+.+.|.+.+. .|++|+++++|++|+.++++|.|+. .+| ++++
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~ 195 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVR 195 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEE
Confidence 335566666665 5799999999999999988888877 677 4443
No 255
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=57.51 E-value=16 Score=35.35 Aligned_cols=27 Identities=11% Similarity=-0.091 Sum_probs=21.5
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCCCc
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRLGG 108 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drvGG 108 (350)
++|+|+++|+ ++|++|+|+|+.+-.+|
T Consensus 11 gGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 11 GGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred cCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 4559999998 57999999999874443
No 256
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=57.27 E-value=4.9 Score=38.19 Aligned_cols=37 Identities=8% Similarity=0.056 Sum_probs=25.4
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCc
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIH 346 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~ 346 (350)
.-+.+.+.+. .|+++++++.|++|+ ++++.+...+|.
T Consensus 202 ~~~~l~~~l~~~GV~~~~~~~v~~v~--~~~~~~~~~~g~ 239 (430)
T 3hyw_A 202 SKRLVEDLFAERNIDWIANVAVKAIE--PDKVIYEDLNGN 239 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEEC--SSEEEEECTTSC
T ss_pred HHHHHHHHHHhCCeEEEeCceEEEEe--CCceEEEeeCCC
Confidence 3344445555 689999999999984 456666665553
No 257
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=56.72 E-value=10 Score=36.39 Aligned_cols=32 Identities=25% Similarity=0.240 Sum_probs=26.1
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
.+|+|| +||+||. ++|++|+|+|++ .+||.+.
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 50 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCV 50 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHH
T ss_pred CCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCc
Confidence 456666 9999987 579999999997 7899764
No 258
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=54.69 E-value=15 Score=36.11 Aligned_cols=26 Identities=19% Similarity=0.215 Sum_probs=20.5
Q ss_pred ceeehh----hHhHhhh---c---CCCCEEEEecCC
Q psy7666 79 LLLLVI----RILCTVL---R---ISTPITLLESSS 104 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~---~G~~VtVlEa~d 104 (350)
.+|+|| +|+++|. + .|.+|+|+|+.+
T Consensus 26 ~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 26 DKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 445554 9999986 6 899999999864
No 259
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=54.66 E-value=18 Score=35.13 Aligned_cols=27 Identities=26% Similarity=0.377 Sum_probs=24.0
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCCcce
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLGGWV 110 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvGGRi 110 (350)
+|||+||+ ++|.+|+|+|+.+.+||..
T Consensus 51 ~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s 80 (510)
T 4at0_A 51 IAGVAASIEAARAGADVLVLERTSGWGGAT 80 (510)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred HHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 49999997 5799999999999999874
No 260
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=54.39 E-value=17 Score=32.92 Aligned_cols=44 Identities=14% Similarity=0.137 Sum_probs=33.6
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCC-eEEEEeCCCceec
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEK-GVKAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~-gv~V~~~~G~~~~ 349 (350)
..+.+.+.+.+. .|.+++++++|++|..+++ .+.|++.+|++++
T Consensus 74 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~ 119 (360)
T 3ab1_A 74 IDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYR 119 (360)
T ss_dssp HHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred HHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEE
Confidence 445666666665 5789999999999999765 6888888886553
No 261
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=54.32 E-value=14 Score=35.65 Aligned_cols=31 Identities=35% Similarity=0.449 Sum_probs=24.8
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
+|+|| |||+||. +.|++|+|+|++ .+||.+.
T Consensus 4 dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~ 41 (500)
T 1onf_A 4 DLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCV 41 (500)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCcccc
Confidence 35555 9999987 579999999998 5898753
No 262
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=54.13 E-value=16 Score=34.86 Aligned_cols=31 Identities=19% Similarity=0.322 Sum_probs=25.1
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcce
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWV 110 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi 110 (350)
.+|+|| ||++||. ++|++|+|+|+.+ +||.+
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~ 44 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVC 44 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCC
Confidence 346665 9999987 5799999999987 89864
No 263
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=53.58 E-value=14 Score=35.41 Aligned_cols=32 Identities=16% Similarity=0.217 Sum_probs=26.5
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
+|+|| +|++||. +.|++|+|+|+++.+||.+.
T Consensus 8 dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 46 (482)
T 1ojt_A 8 DVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCL 46 (482)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHH
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcee
Confidence 45555 9999987 57999999999999998653
No 264
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=53.42 E-value=15 Score=34.66 Aligned_cols=29 Identities=7% Similarity=0.040 Sum_probs=22.3
Q ss_pred ceeehh----hHhHhhh---cCCC--CEEEEecCCCCC
Q psy7666 79 LLLLVI----RILCTVL---RIST--PITLLESSSRLG 107 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~--~VtVlEa~drvG 107 (350)
.+|+|| |||+||. ++|+ +|+|+|+.+.++
T Consensus 5 ~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 42 (431)
T 1q1r_A 5 DNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP 42 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC
T ss_pred CcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC
Confidence 345555 9999987 5687 799999987754
No 265
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=53.19 E-value=4.7 Score=37.84 Aligned_cols=40 Identities=8% Similarity=0.060 Sum_probs=27.7
Q ss_pred HHHHHHHHHhhc-CCCEEEeCccee---------EEEEeCCeEEEEeCCC
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCT---------NLEFLEKGVKAVDQPI 345 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~---------~I~~~~~gv~V~~~~G 345 (350)
..+.++|.+.+. .|++|+++++|+ +|..++++|.|.+.+|
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g 221 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR 221 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc
Confidence 568888888887 789999999999 8887777777766665
No 266
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=52.96 E-value=21 Score=33.77 Aligned_cols=25 Identities=12% Similarity=-0.067 Sum_probs=20.6
Q ss_pred hhHhHhhh---cC--CCCEEEEecCCCCCc
Q psy7666 84 IRILCTVL---RI--STPITLLESSSRLGG 108 (350)
Q Consensus 84 iaGLaaA~---~~--G~~VtVlEa~drvGG 108 (350)
.|||+||. +. |++|+|+|+.+.+|.
T Consensus 10 ~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 39 (452)
T 2cdu_A 10 HAGTFAVKQTIADHPDADVTAYEMNDNISF 39 (452)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEESSSCCCB
T ss_pred HHHHHHHHHHHhhCcCCcEEEEECCCCCCc
Confidence 39999987 34 999999999987654
No 267
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=52.35 E-value=22 Score=30.27 Aligned_cols=42 Identities=12% Similarity=-0.070 Sum_probs=30.9
Q ss_pred HHHHHHHHhhc-C-CCEEEeCcceeEEEEeCCeE-EEEeCCCceec
Q psy7666 307 TIVNTLGEHLS-N-KVEVKMDTTCTNLEFLEKGV-KAVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~-~-g~~I~l~~~V~~I~~~~~gv-~V~~~~G~~~~ 349 (350)
.+.+.|.+.+. . |++|+ +++|++|..+++++ .|.+.+|++++
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~ 113 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPAR 113 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEE
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEE
Confidence 45566666665 3 78888 67999999988774 68888886554
No 268
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=51.93 E-value=25 Score=34.65 Aligned_cols=30 Identities=17% Similarity=0.187 Sum_probs=24.0
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEec--------CCCCCcc
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLES--------SSRLGGW 109 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa--------~drvGGR 109 (350)
.|+|| +|++||. ++|.+|.|+|+ ...+||-
T Consensus 44 DviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGt 88 (542)
T 4b1b_A 44 DYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGT 88 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCc
Confidence 46777 8999987 67999999997 3458983
No 269
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=51.71 E-value=23 Score=32.04 Aligned_cols=32 Identities=13% Similarity=0.258 Sum_probs=25.6
Q ss_pred eeehh----hHhHhhh---cCCC-CEEEEecCCCCCcceEE
Q psy7666 80 LLLVI----RILCTVL---RIST-PITLLESSSRLGGWVRS 112 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~-~VtVlEa~drvGGRi~T 112 (350)
+|+|| +||++|. +.|+ +|+|+|+++ +||.+..
T Consensus 6 ~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~ 45 (369)
T 3d1c_A 6 KVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKH 45 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHT
T ss_pred cEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCcccc
Confidence 45555 9999987 5799 999999998 9996543
No 270
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=51.21 E-value=20 Score=35.46 Aligned_cols=41 Identities=5% Similarity=0.049 Sum_probs=31.1
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeC-Ce---EEEEeCCCc
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLE-KG---VKAVDQPIH 346 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~-~g---v~V~~~~G~ 346 (350)
..+.+.|.+.+. .|++|+++++|++|..++ ++ |.+...+|+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~ 300 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTG 300 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTE
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCc
Confidence 458888888887 889999999999998876 53 445544665
No 271
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=50.73 E-value=16 Score=34.80 Aligned_cols=29 Identities=17% Similarity=0.240 Sum_probs=23.3
Q ss_pred eehh----hHhHhhh---cCCCCEEEEecCCCCCcc
Q psy7666 81 LLVI----RILCTVL---RISTPITLLESSSRLGGW 109 (350)
Q Consensus 81 v~vi----aGLaaA~---~~G~~VtVlEa~drvGGR 109 (350)
|+|| |||+||. ++|++|+|+|+++.+||+
T Consensus 6 VvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~ 41 (476)
T 3lad_A 6 VIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGK 41 (476)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSS
T ss_pred EEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCC
Confidence 5555 9999997 569999999999865555
No 272
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=50.48 E-value=21 Score=35.13 Aligned_cols=41 Identities=10% Similarity=0.092 Sum_probs=31.9
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeC-Ce---EEEEeCCCc
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLE-KG---VKAVDQPIH 346 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~-~g---v~V~~~~G~ 346 (350)
..+.+.|.+.+. .|++|+++++|++|..++ ++ |.+...+|+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~ 300 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKG 300 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCc
Confidence 458888888887 889999999999999876 43 445544675
No 273
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=48.86 E-value=18 Score=34.52 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=26.6
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
+|+|| ||++||. +.|++|+|+|+.+.+||.+.
T Consensus 4 dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 4 DVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 35555 9999987 57999999999999999754
No 274
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=48.51 E-value=27 Score=34.01 Aligned_cols=22 Identities=27% Similarity=0.184 Sum_probs=18.4
Q ss_pred hhhHhHhhh---c---CCCCEEEEecCC
Q psy7666 83 VIRILCTVL---R---ISTPITLLESSS 104 (350)
Q Consensus 83 viaGLaaA~---~---~G~~VtVlEa~d 104 (350)
+++||++|+ + .|++|+|+|+.+
T Consensus 14 G~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 14 GTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp SHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 349999987 6 899999999954
No 275
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=48.24 E-value=10 Score=36.92 Aligned_cols=24 Identities=13% Similarity=0.098 Sum_probs=19.9
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCC
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLG 107 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvG 107 (350)
.+|+++|. +.|.+|+|+|+.++.+
T Consensus 15 ~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 15 YGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred HHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 38888887 5799999999988765
No 276
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=48.23 E-value=24 Score=34.40 Aligned_cols=28 Identities=18% Similarity=0.316 Sum_probs=22.9
Q ss_pred eeehh----hHhHhhh---cC--CCCEEEEecCCCCC
Q psy7666 80 LLLVI----RILCTVL---RI--STPITLLESSSRLG 107 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~--G~~VtVlEa~drvG 107 (350)
+|+|| |||+||. +. |++|+|+|+.+.+|
T Consensus 3 ~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 3 KILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred cEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 45555 9999997 33 89999999999876
No 277
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=48.07 E-value=9.2 Score=35.47 Aligned_cols=21 Identities=10% Similarity=0.282 Sum_probs=16.8
Q ss_pred hhHhHhhh---cCC--CCEEEEecCC
Q psy7666 84 IRILCTVL---RIS--TPITLLESSS 104 (350)
Q Consensus 84 iaGLaaA~---~~G--~~VtVlEa~d 104 (350)
+|||+||. ++| .+|+|+|+.+
T Consensus 14 ~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 14 LAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp HHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 39999987 457 6799999875
No 278
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=47.94 E-value=20 Score=35.11 Aligned_cols=44 Identities=14% Similarity=0.142 Sum_probs=32.0
Q ss_pred HHHHHHHHHhhcCCCEEEeCcceeEEEEeCC--eEEEEeCCCceec
Q psy7666 306 QTIVNTLGEHLSNKVEVKMDTTCTNLEFLEK--GVKAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~--gv~V~~~~G~~~~ 349 (350)
....+.+++.+..+..|+++++|++++++++ .|.|++.+|++++
T Consensus 97 ~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ 142 (542)
T 1w4x_A 97 LRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIR 142 (542)
T ss_dssp HHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEE
T ss_pred HHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEE
Confidence 3444555555532368999999999999764 6999999887654
No 279
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=46.94 E-value=11 Score=36.89 Aligned_cols=27 Identities=7% Similarity=0.028 Sum_probs=20.6
Q ss_pred CCCEEEeCcceeEEEEeCCeE-EEEeCC
Q psy7666 318 NKVEVKMDTTCTNLEFLEKGV-KAVDQP 344 (350)
Q Consensus 318 ~g~~I~l~~~V~~I~~~~~gv-~V~~~~ 344 (350)
.|.+|++++.|++|..+++++ .|.+.+
T Consensus 209 ~~~~i~~~~~V~~i~~~~~~~~gV~~~~ 236 (546)
T 1kdg_A 209 PNFTFKTNVMVSNVVRNGSQILGVQTND 236 (546)
T ss_dssp TTEEEECSCCEEEEEEETTEEEEEEESC
T ss_pred CCcEEEeCCEEEEEEEeCCEEEEEEEEe
Confidence 478999999999999987653 455543
No 280
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=46.39 E-value=19 Score=34.20 Aligned_cols=25 Identities=20% Similarity=0.418 Sum_probs=22.2
Q ss_pred hHhHhhh---cCCCCEEEEecCCCCCcce
Q psy7666 85 RILCTVL---RISTPITLLESSSRLGGWV 110 (350)
Q Consensus 85 aGLaaA~---~~G~~VtVlEa~drvGGRi 110 (350)
||++||. +.|++|+|+|+. .+||.+
T Consensus 14 aGl~aA~~l~~~g~~V~lie~~-~~gG~~ 41 (455)
T 1ebd_A 14 GGYVAAIRAAQLGQKVTIVEKG-NLGGVC 41 (455)
T ss_dssp HHHHHHHHHHHTTCCEEEEESS-CTTHHH
T ss_pred HHHHHHHHHHhCCCeEEEEECC-CCCCcC
Confidence 9999987 579999999997 899875
No 281
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=46.26 E-value=25 Score=34.67 Aligned_cols=28 Identities=18% Similarity=-0.029 Sum_probs=23.2
Q ss_pred hhhHhHhhh---cCCCCEEEEecCCCCCcce
Q psy7666 83 VIRILCTVL---RISTPITLLESSSRLGGWV 110 (350)
Q Consensus 83 viaGLaaA~---~~G~~VtVlEa~drvGGRi 110 (350)
+++||++|+ ++|.+|+|+|+.+..||..
T Consensus 27 Gi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS 57 (561)
T 3da1_A 27 GITGAGIALDAQVRGIQTGLVEMNDFASGTS 57 (561)
T ss_dssp SHHHHHHHHHHHTTTCCEEEEESSSTTCSGG
T ss_pred CHHHHHHHHHHHhCCCcEEEEECCCCCCCcc
Confidence 449999987 5799999999998777653
No 282
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=46.04 E-value=22 Score=33.96 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=27.1
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
.+|+|| |||+||. ++|++|+|+|+.+.+||.+.
T Consensus 7 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (474)
T 1zmd_A 7 ADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCL 46 (474)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCccc
Confidence 346655 9999987 57999999999999999753
No 283
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=45.80 E-value=25 Score=34.50 Aligned_cols=45 Identities=9% Similarity=0.096 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhhcCCCEEEeCcceeEEEEeCC--eEEEEeCCCceec
Q psy7666 305 LQTIVNTLGEHLSNKVEVKMDTTCTNLEFLEK--GVKAVDQPIHQMT 349 (350)
Q Consensus 305 ~~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~--gv~V~~~~G~~~~ 349 (350)
+....+..++.......|+++++|++|.++++ +|.|++.+|++++
T Consensus 89 i~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ 135 (540)
T 3gwf_A 89 ILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYR 135 (540)
T ss_dssp HHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred HHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEE
Confidence 34445555555431128999999999999876 7999999998654
No 284
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=45.53 E-value=27 Score=33.22 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=25.7
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
.+|+|| +||+||. +.|++|+|+|+. .+||.+.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~ 43 (467)
T 1zk7_A 5 VQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCV 43 (467)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCcccc
Confidence 346555 9999987 579999999987 8998753
No 285
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=44.90 E-value=35 Score=29.96 Aligned_cols=43 Identities=7% Similarity=0.018 Sum_probs=32.4
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
..+.+.+.+.+. .|+++++ ++|++|..+++++.|+..+|++++
T Consensus 59 ~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~ 102 (311)
T 2q0l_A 59 LDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFE 102 (311)
T ss_dssp HHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEE
Confidence 345566655555 5789988 799999998888888888876653
No 286
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=44.75 E-value=11 Score=34.56 Aligned_cols=27 Identities=11% Similarity=0.112 Sum_probs=19.5
Q ss_pred CCceeehh------hHhHhhh-cCCCCEEEEecC
Q psy7666 77 DLLLLLVI------RILCTVL-RISTPITLLESS 103 (350)
Q Consensus 77 ~~~~v~vi------aGLaaA~-~~G~~VtVlEa~ 103 (350)
...+|+|| +|+++.. .+|++|+|+|.+
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 33668877 6777655 689999999854
No 287
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=44.32 E-value=29 Score=30.57 Aligned_cols=41 Identities=17% Similarity=0.228 Sum_probs=33.1
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCC-eEEEEeCCCc
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEK-GVKAVDQPIH 346 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~-gv~V~~~~G~ 346 (350)
..+.+.+.+.+. .|.+++++++|++|...++ .|.|++.+|+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~ 109 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET 109 (332)
T ss_dssp HHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE
T ss_pred HHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE
Confidence 456677777776 6799999999999999877 6888887765
No 288
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=42.69 E-value=13 Score=36.89 Aligned_cols=21 Identities=5% Similarity=-0.094 Sum_probs=17.3
Q ss_pred hHhHhhh---cCC-CCEEEEecCCC
Q psy7666 85 RILCTVL---RIS-TPITLLESSSR 105 (350)
Q Consensus 85 aGLaaA~---~~G-~~VtVlEa~dr 105 (350)
||+++|. +.| .+|.|+||.+.
T Consensus 17 AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 17 AGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp HHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred HHHHHHHHHHhCCCCcEEEEecCCC
Confidence 9999887 345 79999999876
No 289
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=42.00 E-value=31 Score=33.93 Aligned_cols=44 Identities=9% Similarity=0.169 Sum_probs=32.0
Q ss_pred HHHHHHHHHhhcCCCEEEeCcceeEEEEeCC--eEEEEeCCCceec
Q psy7666 306 QTIVNTLGEHLSNKVEVKMDTTCTNLEFLEK--GVKAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~--gv~V~~~~G~~~~ 349 (350)
....+.+++.......|+++++|+++.++++ .|.|++.+|++++
T Consensus 102 ~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ 147 (549)
T 4ap3_A 102 LAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVS 147 (549)
T ss_dssp HHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEE
T ss_pred HHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEE
Confidence 3344455555531138999999999999876 7999999998664
No 290
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=41.33 E-value=24 Score=35.15 Aligned_cols=40 Identities=13% Similarity=0.095 Sum_probs=30.9
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEe-CCeEEEEeC-CC
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFL-EKGVKAVDQ-PI 345 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~-~~gv~V~~~-~G 345 (350)
..+.+.|.+.+. .|++|+.+++|++|..+ ++.+.|++. +|
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G 170 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGG 170 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCC
Confidence 346667777776 78999999999999986 456777776 66
No 291
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=41.23 E-value=11 Score=36.89 Aligned_cols=18 Identities=17% Similarity=0.368 Sum_probs=16.4
Q ss_pred CCCEEEeCcceeEEEEeC
Q psy7666 318 NKVEVKMDTTCTNLEFLE 335 (350)
Q Consensus 318 ~g~~I~l~~~V~~I~~~~ 335 (350)
.|.+|.+++.|++|..++
T Consensus 207 ~~~~v~~~~~v~~i~~~~ 224 (536)
T 1ju2_A 207 NNLRVGVHASVEKIIFSN 224 (536)
T ss_dssp TTEEEEESCEEEEEEECC
T ss_pred CCcEEEeCCEEEEEEECC
Confidence 678999999999999876
No 292
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=41.07 E-value=31 Score=30.20 Aligned_cols=43 Identities=9% Similarity=0.183 Sum_probs=31.9
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
..+.+.+.+.+. .|.++++ ++|++|..+++.+.|++.+|++++
T Consensus 70 ~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~ 113 (323)
T 3f8d_A 70 SDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFK 113 (323)
T ss_dssp HHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEE
Confidence 346666666665 6789999 999999998888999988877653
No 293
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=40.76 E-value=39 Score=31.45 Aligned_cols=29 Identities=14% Similarity=0.122 Sum_probs=21.9
Q ss_pred ceeehh----hHhHhhh---cCCC--CEEEEecCCCCC
Q psy7666 79 LLLLVI----RILCTVL---RIST--PITLLESSSRLG 107 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~--~VtVlEa~drvG 107 (350)
++|+|| |||+||. +.|+ +|+|+|+.+.++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 45 (408)
T 2gqw_A 8 APVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP 45 (408)
T ss_dssp SSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC
T ss_pred CcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc
Confidence 346555 9999987 4576 599999988754
No 294
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=40.72 E-value=39 Score=33.43 Aligned_cols=38 Identities=29% Similarity=0.357 Sum_probs=29.4
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCe-EE-EEeC
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG-VK-AVDQ 343 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g-v~-V~~~ 343 (350)
..+.+.|.+.+. .|++|+++++|++|..++++ |. |++.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~ 184 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATN 184 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeC
Confidence 457777777776 78999999999999988654 53 6655
No 295
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=40.60 E-value=25 Score=33.46 Aligned_cols=26 Identities=12% Similarity=0.207 Sum_probs=22.4
Q ss_pred hhHhHhhh---cCCCCEEEEecCCCCCcce
Q psy7666 84 IRILCTVL---RISTPITLLESSSRLGGWV 110 (350)
Q Consensus 84 iaGLaaA~---~~G~~VtVlEa~drvGGRi 110 (350)
.+||+||. +.|++|+|+|++ .+||.+
T Consensus 13 ~aGl~aA~~l~~~G~~V~liE~~-~~gG~~ 41 (464)
T 2a8x_A 13 PGGYVAAIRAAQLGLSTAIVEPK-YWGGVC 41 (464)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSS-CTTHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEeCC-CCCCcc
Confidence 39999987 579999999998 889875
No 296
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=40.12 E-value=15 Score=33.96 Aligned_cols=27 Identities=19% Similarity=0.135 Sum_probs=21.3
Q ss_pred ceeehh----hHhHhhh---c--CCCCEEEEecCCC
Q psy7666 79 LLLLVI----RILCTVL---R--ISTPITLLESSSR 105 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~--~G~~VtVlEa~dr 105 (350)
|+|+|| |||+||. + .+.+|||+|+++.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 567777 9999985 2 3479999999875
No 297
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=38.92 E-value=32 Score=30.17 Aligned_cols=43 Identities=12% Similarity=0.045 Sum_probs=31.4
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeC---CeEEEEeCCCceec
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLE---KGVKAVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~---~gv~V~~~~G~~~~ 349 (350)
.+.+.+.+.+. .|++++++++|+.|..+. +.+.|++.+|++++
T Consensus 57 ~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~ 103 (310)
T 1fl2_A 57 KLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLK 103 (310)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEE
T ss_pred HHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEE
Confidence 45555655555 578999999999998753 26888888886553
No 298
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=38.63 E-value=36 Score=32.53 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=26.9
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
+|+|| |||+||. ++|++|+|+|+++++||.+.
T Consensus 27 dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~ 65 (491)
T 3urh_A 27 DLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCL 65 (491)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 46665 9999997 57999999999999999643
No 299
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=37.25 E-value=16 Score=35.36 Aligned_cols=20 Identities=5% Similarity=0.145 Sum_probs=17.5
Q ss_pred CCCEEEeCcceeEEEEeCCe
Q psy7666 318 NKVEVKMDTTCTNLEFLEKG 337 (350)
Q Consensus 318 ~g~~I~l~~~V~~I~~~~~g 337 (350)
++.+|.+++.|++|..++++
T Consensus 224 ~nl~v~~~~~v~~i~~~~~~ 243 (526)
T 3t37_A 224 KNLTILTGSRVRRLKLEGNQ 243 (526)
T ss_dssp TTEEEECSCEEEEEEEETTE
T ss_pred CCeEEEeCCEEEEEEecCCe
Confidence 46799999999999998875
No 300
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=36.60 E-value=30 Score=30.78 Aligned_cols=41 Identities=12% Similarity=0.184 Sum_probs=30.4
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
.+.+.+.+.+. .|+++++++ |..|..+++++.|++ +|++++
T Consensus 71 ~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~ 112 (333)
T 1vdc_A 71 ELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAIL 112 (333)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEE
Confidence 46666666665 678999997 999988777788877 665543
No 301
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=36.53 E-value=25 Score=33.41 Aligned_cols=33 Identities=18% Similarity=0.220 Sum_probs=26.8
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
.+|+|| ||++||. +.|++|+|+|+.+.+||.+.
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL 46 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc
Confidence 345555 9999987 46999999999999999753
No 302
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=36.43 E-value=28 Score=33.17 Aligned_cols=31 Identities=16% Similarity=0.295 Sum_probs=26.0
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcce
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWV 110 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi 110 (350)
+|+|| +||+||. ++|++|+|+|+++.+||.+
T Consensus 7 dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~ 44 (478)
T 1v59_A 7 DVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTC 44 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCcc
Confidence 45555 9999987 5799999999999999965
No 303
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=35.78 E-value=32 Score=32.46 Aligned_cols=35 Identities=11% Similarity=0.030 Sum_probs=26.1
Q ss_pred HHHHHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCC
Q psy7666 308 IVNTLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQP 344 (350)
Q Consensus 308 L~~aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~ 344 (350)
..+..++.+ +..|+++++|++|...+++|.|++.+
T Consensus 120 ~l~~~~~~~--~~~i~~~t~V~~v~~~~~~~~V~~~~ 154 (447)
T 2gv8_A 120 YQRIYAQPL--LPFIKLATDVLDIEKKDGSWVVTYKG 154 (447)
T ss_dssp HHHHHHGGG--GGGEECSEEEEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHh--hCeEEeCCEEEEEEeCCCeEEEEEee
Confidence 334444444 36899999999999988888888765
No 304
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=35.71 E-value=44 Score=29.31 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=25.5
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcceEE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGWVRS 112 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~T 112 (350)
.+|+|| |||+||. ++|++|+|+|+ +.+||.+..
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~ 45 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARANLQPVLITG-MEKGGQLTT 45 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCCEEECC-SSTTGGGGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEcc-CCCCceEec
Confidence 345555 9999987 57999999996 588997643
No 305
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=35.05 E-value=57 Score=30.65 Aligned_cols=31 Identities=6% Similarity=0.041 Sum_probs=25.1
Q ss_pred eeehh----hHhHhhh---cCC-----CCEEEEecCCCCCcce
Q psy7666 80 LLLVI----RILCTVL---RIS-----TPITLLESSSRLGGWV 110 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G-----~~VtVlEa~drvGGRi 110 (350)
+|+|| |||+||. +.| .+|+|+|+++.+|.+.
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~ 74 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG 74 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG
T ss_pred CEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC
Confidence 46555 9999987 467 9999999999998554
No 306
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=34.17 E-value=21 Score=33.26 Aligned_cols=36 Identities=11% Similarity=0.039 Sum_probs=25.5
Q ss_pred HHHHHHHhhc--CC-CEEEeCcceeEEEEeCCeEEEEeCC
Q psy7666 308 IVNTLGEHLS--NK-VEVKMDTTCTNLEFLEKGVKAVDQP 344 (350)
Q Consensus 308 L~~aLa~~L~--~g-~~I~l~~~V~~I~~~~~gv~V~~~~ 344 (350)
|.+.|.+.+. .| ++|+++++|++|.. +++|.|+..+
T Consensus 109 l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~ 147 (410)
T 3c96_A 109 LQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGAR 147 (410)
T ss_dssp HHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEE
T ss_pred HHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEec
Confidence 4444544443 13 48999999999998 7778887765
No 307
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=33.66 E-value=30 Score=33.45 Aligned_cols=37 Identities=19% Similarity=0.042 Sum_probs=28.0
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEe---CCeEEEEe
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFL---EKGVKAVD 342 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~---~~gv~V~~ 342 (350)
..+.+.|.+.+. .|++|+++++|++|..+ ++++.|+.
T Consensus 166 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~ 206 (497)
T 2bry_A 166 RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQL 206 (497)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEE
Confidence 456667777776 68999999999999875 34567766
No 308
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=31.95 E-value=24 Score=31.23 Aligned_cols=29 Identities=17% Similarity=0.155 Sum_probs=20.1
Q ss_pred ceeehh-hHhH---hhh---cCCCCEEEEecCCCCC
Q psy7666 79 LLLLVI-RILC---TVL---RISTPITLLESSSRLG 107 (350)
Q Consensus 79 ~~v~vi-aGLa---aA~---~~G~~VtVlEa~drvG 107 (350)
++|+|| +|.. .|. +.|.+|||+|+++++-
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~ 181 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccC
Confidence 567777 3332 233 5799999999988753
No 309
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=31.33 E-value=45 Score=32.68 Aligned_cols=45 Identities=13% Similarity=0.165 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhhcCCCEEEeCcceeEEEEeCC--eEEEEeCCCceec
Q psy7666 305 LQTIVNTLGEHLSNKVEVKMDTTCTNLEFLEK--GVKAVDQPIHQMT 349 (350)
Q Consensus 305 ~~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~--gv~V~~~~G~~~~ 349 (350)
+....+.+++.......|+++++|+++.++++ .|.|++.+|++++
T Consensus 89 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ 135 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVT 135 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEE
T ss_pred HHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEE
Confidence 34455556666531137999999999999765 6999999998764
No 310
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=31.32 E-value=40 Score=32.15 Aligned_cols=33 Identities=21% Similarity=0.163 Sum_probs=24.3
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCC---------CCCcceE
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSS---------RLGGWVR 111 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~d---------rvGGRi~ 111 (350)
.+|+|| |||+||. ++|++|+|+|+.+ .+||-+.
T Consensus 10 ~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~ 58 (483)
T 3dgh_A 10 YDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCV 58 (483)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeec
Confidence 346666 9999987 5799999999422 3777653
No 311
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=31.23 E-value=82 Score=31.45 Aligned_cols=41 Identities=12% Similarity=0.007 Sum_probs=32.0
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCe---EEEEe-CCCc
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG---VKAVD-QPIH 346 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g---v~V~~-~~G~ 346 (350)
..+..+|.+.+. .|++|+.+++|++|..++++ |.+.+ .+|+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~ 200 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGT 200 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCC
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCc
Confidence 468889988887 78999999999999987664 34433 4665
No 312
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=31.22 E-value=22 Score=33.17 Aligned_cols=31 Identities=10% Similarity=-0.191 Sum_probs=22.1
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCcc
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGGW 109 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGR 109 (350)
++|+|| .|+-+|. +.|.+|+|+|+++++..+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 184 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER 184 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 457776 4443343 569999999999987655
No 313
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=31.03 E-value=52 Score=32.40 Aligned_cols=27 Identities=15% Similarity=-0.040 Sum_probs=22.1
Q ss_pred ehhhHhHhhh---cCCCCEEEEecCCCCCc
Q psy7666 82 LVIRILCTVL---RISTPITLLESSSRLGG 108 (350)
Q Consensus 82 ~viaGLaaA~---~~G~~VtVlEa~drvGG 108 (350)
++|+|+++|+ ++|++|+|+|+.+-.+|
T Consensus 40 gGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 40 GGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred cCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 3459999998 57999999999876555
No 314
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=30.69 E-value=25 Score=34.08 Aligned_cols=22 Identities=14% Similarity=0.178 Sum_probs=18.2
Q ss_pred hHhHhhh---cCCCCEEEEecCCCC
Q psy7666 85 RILCTVL---RISTPITLLESSSRL 106 (350)
Q Consensus 85 aGLaaA~---~~G~~VtVlEa~drv 106 (350)
+|+++|. +.|.+|.|+|+....
T Consensus 22 ~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 22 GGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp HHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred HHHHHHHHHHHCCCcEEEEECCCCC
Confidence 8888876 579999999998653
No 315
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=29.65 E-value=26 Score=34.87 Aligned_cols=31 Identities=6% Similarity=-0.060 Sum_probs=22.4
Q ss_pred CCCEEEeCcceeEEEEe----CCe---EEEEeCCCcee
Q psy7666 318 NKVEVKMDTTCTNLEFL----EKG---VKAVDQPIHQM 348 (350)
Q Consensus 318 ~g~~I~l~~~V~~I~~~----~~g---v~V~~~~G~~~ 348 (350)
+|.+|.+++.|++|..+ +++ |.+...+|+..
T Consensus 240 ~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~ 277 (583)
T 3qvp_A 240 PNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTH 277 (583)
T ss_dssp TTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEE
T ss_pred CCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEE
Confidence 67899999999999988 443 44443466654
No 316
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=29.24 E-value=49 Score=32.44 Aligned_cols=64 Identities=14% Similarity=0.147 Sum_probs=37.4
Q ss_pred ceeehh----hHhHhhh---cC--CCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHHHHHHHcCCC
Q psy7666 79 LLLLVI----RILCTVL---RI--STPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTLKLVEDLGLA 148 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~--G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~~l~~elGl~ 148 (350)
++|+|| |||+||. ++ |++|+|+|+++.+|- . ..+.....+.........-...+..+.+++|+.
T Consensus 37 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~-----~-~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~ 109 (588)
T 3ics_A 37 RKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISF-----A-NCGLPYYIGGVITERQKLLVQTVERMSKRFNLD 109 (588)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB-----C-GGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCE
T ss_pred CCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccc-----c-CCCCchhhcCcCCChHHhhccCHHHHHHhcCcE
Confidence 557666 9999997 34 899999999999762 1 123333334332211100001356677788874
No 317
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=28.49 E-value=26 Score=33.43 Aligned_cols=70 Identities=13% Similarity=0.051 Sum_probs=38.6
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCC-CcceEEEecCCCeEEecC----------Ccee--cCCCCCchHH
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRL-GGWVRSVQSPEGLIFEKG----------PRTI--RPKGRLGANT 138 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drv-GGRi~T~~~~~G~~~D~G----------a~~~--~~~~~~~~~l 138 (350)
++|.|| +|+++|. ++|++|++.|.++.. .-...... ..|..+..| +..+ .|.-+.+++.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~-~~gi~~~~g~~~~~~~~~~~d~vv~spgi~~~~p~ 88 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLL-EEGIKVVCGSHPLELLDEDFCYMIKNPGIPYNNPM 88 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHH-HTTCEEEESCCCGGGGGSCEEEEEECTTSCTTSHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHH-hCCCEEEECCChHHhhcCCCCEEEECCcCCCCChh
Confidence 445544 9999986 689999999986521 00000111 123333222 2322 2322234577
Q ss_pred HHHHHHcCCCC
Q psy7666 139 LKLVEDLGLAD 149 (350)
Q Consensus 139 ~~l~~elGl~~ 149 (350)
+..+++.|++.
T Consensus 89 ~~~a~~~gi~v 99 (451)
T 3lk7_A 89 VKKALEKQIPV 99 (451)
T ss_dssp HHHHHHTTCCE
T ss_pred HHHHHHCCCcE
Confidence 88888988864
No 318
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=28.49 E-value=33 Score=33.28 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=25.3
Q ss_pred CCCCCCceeehh----hHhHhhh---cCCCCEEEEecCCC
Q psy7666 73 PFPPDLLLLLVI----RILCTVL---RISTPITLLESSSR 105 (350)
Q Consensus 73 ~~~~~~~~v~vi----aGLaaA~---~~G~~VtVlEa~dr 105 (350)
|...+.++|+|| |||++|. +.+++|||+|+++.
T Consensus 37 p~~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 37 PQHSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CCSCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 444455678777 9999987 45899999999864
No 319
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=27.87 E-value=78 Score=30.53 Aligned_cols=52 Identities=17% Similarity=0.176 Sum_probs=33.8
Q ss_pred ceeehh----hHhHhhh---c------------CCCCEEEEecCCCCCcceEEEecCCCeEEecCCceecCCCCCchHHH
Q psy7666 79 LLLLVI----RILCTVL---R------------ISTPITLLESSSRLGGWVRSVQSPEGLIFEKGPRTIRPKGRLGANTL 139 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~------------~G~~VtVlEa~drvGGRi~T~~~~~G~~~D~Ga~~~~~~~~~~~~l~ 139 (350)
.+|+|| |||++|. + .|++|+|+|+.+.. + .|. |- ...| ...
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~--~-------~g~----g~----~~~p---~~~ 67 (526)
T 2pyx_A 8 TEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVA--T-------IGV----GE----GTWP---SMR 67 (526)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCC--C-------CCS----CE----ECCT---HHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCC--C-------cce----ee----echH---hHH
Confidence 345554 9999986 5 89999999986531 1 110 11 1123 677
Q ss_pred HHHHHcCCCCc
Q psy7666 140 KLVEDLGLADQ 150 (350)
Q Consensus 140 ~l~~elGl~~~ 150 (350)
++++++|+.+.
T Consensus 68 ~~l~~lGi~e~ 78 (526)
T 2pyx_A 68 STLSKIGIDEN 78 (526)
T ss_dssp HHHHHHTCCHH
T ss_pred HHHHHcCCCHH
Confidence 88899999764
No 320
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=27.83 E-value=1e+02 Score=26.40 Aligned_cols=41 Identities=7% Similarity=-0.076 Sum_probs=28.0
Q ss_pred HHHHHHHhhc--CCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 308 IVNTLGEHLS--NKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 308 L~~aLa~~L~--~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
+.+.+.+.+. .+.++. +.+|+.|..+++++.|++.+|++++
T Consensus 58 ~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~~~~~v~~~~g~~~~ 100 (297)
T 3fbs_A 58 IIAEARRQIERYPTIHWV-EGRVTDAKGSFGEFIVEIDGGRRET 100 (297)
T ss_dssp HHHHHHHHHTTCTTEEEE-ESCEEEEEEETTEEEEEETTSCEEE
T ss_pred HHHHHHHHHHhcCCeEEE-EeEEEEEEEcCCeEEEEECCCCEEE
Confidence 4444444444 245554 5599999998888999988887553
No 321
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=27.59 E-value=89 Score=30.82 Aligned_cols=41 Identities=12% Similarity=0.051 Sum_probs=31.0
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEe-CCe---EEEEe-CCCc
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFL-EKG---VKAVD-QPIH 346 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~-~~g---v~V~~-~~G~ 346 (350)
..+.++|.+.+. .|++|+++++|++|..+ +++ |.+.. .+|+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~ 189 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGE 189 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCe
Confidence 458888888887 78999999999999986 443 34443 5665
No 322
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=26.75 E-value=36 Score=33.38 Aligned_cols=28 Identities=7% Similarity=0.000 Sum_probs=20.4
Q ss_pred HHHHHHHhh-c-CCCEEEeCcceeEEEEeC
Q psy7666 308 IVNTLGEHL-S-NKVEVKMDTTCTNLEFLE 335 (350)
Q Consensus 308 L~~aLa~~L-~-~g~~I~l~~~V~~I~~~~ 335 (350)
...++.+.+ . .|.+|++++.|++|..++
T Consensus 210 ~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~ 239 (546)
T 2jbv_A 210 SSVSYIHPIVEQENFTLLTGLRARQLVFDA 239 (546)
T ss_dssp HHHHHTGGGTTCTTEEEECSCEEEEEEECT
T ss_pred HHHHHHHHHhcCCCcEEEeCCEEEEEEECC
Confidence 334444433 2 579999999999999986
No 323
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=26.58 E-value=36 Score=31.53 Aligned_cols=30 Identities=17% Similarity=0.112 Sum_probs=23.5
Q ss_pred eeehh----hHhHhhh---c---CCCCEEEEecCCCCCcc
Q psy7666 80 LLLVI----RILCTVL---R---ISTPITLLESSSRLGGW 109 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~---~G~~VtVlEa~drvGGR 109 (350)
+|+|| |||+||. + .|++|+|+|+++..+++
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~ 42 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFR 42 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceec
Confidence 45555 9999987 5 68999999999976544
No 324
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=26.50 E-value=67 Score=30.75 Aligned_cols=30 Identities=13% Similarity=0.155 Sum_probs=24.7
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcce
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWV 110 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi 110 (350)
+|+|| |||+||. ++|++|+|+|++ .+||.+
T Consensus 10 DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc 46 (492)
T 3ic9_A 10 DVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTC 46 (492)
T ss_dssp EEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHH
T ss_pred CEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcc
Confidence 46665 9999987 579999999985 699975
No 325
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=26.19 E-value=35 Score=33.78 Aligned_cols=23 Identities=9% Similarity=-0.081 Sum_probs=18.5
Q ss_pred hhHhHhhh---c-CCCCEEEEecCCCC
Q psy7666 84 IRILCTVL---R-ISTPITLLESSSRL 106 (350)
Q Consensus 84 iaGLaaA~---~-~G~~VtVlEa~drv 106 (350)
.||++.|. + .|.+|.|+||....
T Consensus 12 ~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 12 NAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp TTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred HHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 38888886 2 58999999998764
No 326
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=26.08 E-value=63 Score=31.25 Aligned_cols=43 Identities=14% Similarity=0.079 Sum_probs=32.3
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeC---CeEEEEeCCCceec
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLE---KGVKAVDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~---~gv~V~~~~G~~~~ 349 (350)
.+.+.+.+.+. .|++++++++|+.|..+. +.+.|++.+|++++
T Consensus 268 ~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~ 314 (521)
T 1hyu_A 268 KLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLK 314 (521)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEE
Confidence 46666666666 689999999999998652 36888888886553
No 327
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=25.99 E-value=77 Score=30.03 Aligned_cols=31 Identities=29% Similarity=0.351 Sum_probs=25.1
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
+|+|| |||+||. ++|++|+|+|+ +.+||.+.
T Consensus 22 dVvIIGgG~aGl~aA~~la~~G~~V~liE~-~~~GG~~~ 59 (478)
T 3dk9_A 22 DYLVIGGGSGGLASARRAAELGARAAVVES-HKLGGTCV 59 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHH
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEec-CCCCCccc
Confidence 46665 9999987 57999999995 58999853
No 328
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=25.95 E-value=51 Score=32.15 Aligned_cols=35 Identities=14% Similarity=0.192 Sum_probs=27.1
Q ss_pred HHHHHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCC
Q psy7666 308 IVNTLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQP 344 (350)
Q Consensus 308 L~~aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~ 344 (350)
+.+.|.+.+.. . |+++++|++|+.++++|+|+..+
T Consensus 140 l~~~L~~~a~~-~-v~~~~~v~~~~~~~~~v~v~~~~ 174 (549)
T 2r0c_A 140 LAPLLAEAVGE-R-LRTRSRLDSFEQRDDHVRATITD 174 (549)
T ss_dssp HHHHHHHHHGG-G-EECSEEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHHH-h-cccCcEEEEEEEeCCEEEEEEEE
Confidence 55566666651 2 99999999999998888887655
No 329
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=25.75 E-value=36 Score=33.70 Aligned_cols=22 Identities=9% Similarity=-0.035 Sum_probs=18.0
Q ss_pred hHhHhhh---c-CCCCEEEEecCCCC
Q psy7666 85 RILCTVL---R-ISTPITLLESSSRL 106 (350)
Q Consensus 85 aGLaaA~---~-~G~~VtVlEa~drv 106 (350)
+|+++|. + .|.+|.|+|+....
T Consensus 35 ~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 35 TGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp HHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred HHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 8888886 4 69999999998653
No 330
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=25.62 E-value=35 Score=32.35 Aligned_cols=24 Identities=13% Similarity=0.040 Sum_probs=20.0
Q ss_pred hHhHhhh---cCCCCEEEEecCCCCCc
Q psy7666 85 RILCTVL---RISTPITLLESSSRLGG 108 (350)
Q Consensus 85 aGLaaA~---~~G~~VtVlEa~drvGG 108 (350)
+|+++|. ++|++|++.|.++..-|
T Consensus 16 ~G~~~a~~l~~~G~~v~~~D~~~~~~~ 42 (439)
T 2x5o_A 16 TGLSCVDFFLARGVTPRVMDTRMTPPG 42 (439)
T ss_dssp HHHHHHHHHHTTTCCCEEEESSSSCTT
T ss_pred HHHHHHHHHHhCCCEEEEEECCCCcch
Confidence 9999986 68999999999876533
No 331
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=25.18 E-value=82 Score=27.61 Aligned_cols=42 Identities=12% Similarity=0.220 Sum_probs=30.7
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeC---CCcee
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQ---PIHQM 348 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~---~G~~~ 348 (350)
..+.+.+.+.+. .|+++++++ |.+|..+++.|.+++. ++.++
T Consensus 84 ~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~ 129 (338)
T 3itj_A 84 SELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPV 129 (338)
T ss_dssp HHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCE
T ss_pred HHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEE
Confidence 345666666665 679999998 9999988888888773 55443
No 332
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=24.71 E-value=67 Score=30.14 Aligned_cols=24 Identities=13% Similarity=-0.010 Sum_probs=20.4
Q ss_pred hHhHhhh---cC--CCCEEEEecCCCCCc
Q psy7666 85 RILCTVL---RI--STPITLLESSSRLGG 108 (350)
Q Consensus 85 aGLaaA~---~~--G~~VtVlEa~drvGG 108 (350)
|||+||. +. |++|+|+|+.+.+|.
T Consensus 11 aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 39 (447)
T 1nhp_A 11 GGYEAVEELLNLHPDAEIQWYEKGDFISF 39 (447)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEESSSSSSB
T ss_pred HHHHHHHHHHHhCcCCeEEEEECCCccCc
Confidence 9999987 33 999999999988763
No 333
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=24.58 E-value=1.2e+02 Score=30.05 Aligned_cols=41 Identities=7% Similarity=-0.068 Sum_probs=31.6
Q ss_pred HHHHHHHHHhhc-CC-CEEEeCcceeEEEEeCCe---EEEEe-CCCc
Q psy7666 306 QTIVNTLGEHLS-NK-VEVKMDTTCTNLEFLEKG---VKAVD-QPIH 346 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g-~~I~l~~~V~~I~~~~~g---v~V~~-~~G~ 346 (350)
..+..+|.+.+. .| ++|+++++|++|..++++ |.+.. .+|+
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~ 180 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGT 180 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTE
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCc
Confidence 458888888887 66 899999999999988774 43433 5676
No 334
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=24.16 E-value=55 Score=30.98 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=25.9
Q ss_pred HHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEEEeCCC
Q psy7666 308 IVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKAVDQPI 345 (350)
Q Consensus 308 L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V~~~~G 345 (350)
+.+.+.+.+. .|++|+++++|++|.. + ++.|+..+|
T Consensus 214 ~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-~v~v~~~~G 250 (458)
T 1lvl_A 214 LTAPVAESLKKLGIALHLGHSVEGYEN-G-CLLANDGKG 250 (458)
T ss_dssp HHHHHHHHHHHHTCEEETTCEEEEEET-T-EEEEECSSS
T ss_pred HHHHHHHHHHHCCCEEEECCEEEEEEe-C-CEEEEECCC
Confidence 4455556665 6899999999999986 3 376764455
No 335
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=24.12 E-value=1.5e+02 Score=28.29 Aligned_cols=49 Identities=14% Similarity=0.097 Sum_probs=31.6
Q ss_pred EEEecCcHHHHHHHHHHhhcCCCEEEeCcceeEEEEeCCeEEEEeCCCceec
Q psy7666 298 VWSVEGGLQTIVNTLGEHLSNKVEVKMDTTCTNLEFLEKGVKAVDQPIHQMT 349 (350)
Q Consensus 298 ~~~~~GG~~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~gv~V~~~~G~~~~ 349 (350)
...+-+|...+-+.+. . .|++|++++.|++|..+++...|.+.+|+++.
T Consensus 253 vvViGgG~~gle~~l~-~--~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~ 301 (493)
T 1y56_A 253 VAVTGSKADEVIQELE-R--WGIDYVHIPNVKRVEGNEKVERVIDMNNHEYK 301 (493)
T ss_dssp EEEESTTHHHHHHHHH-H--HTCEEEECSSEEEEECSSSCCEEEETTCCEEE
T ss_pred EEEECCCHHHHHHHHH-h--CCcEEEeCCeeEEEecCCceEEEEeCCCeEEE
Confidence 3434455555543322 2 47999999999999865444467777776654
No 336
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=24.07 E-value=77 Score=30.18 Aligned_cols=32 Identities=25% Similarity=0.259 Sum_probs=25.6
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEec--------CCCCCcceE
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLES--------SSRLGGWVR 111 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa--------~drvGGRi~ 111 (350)
.|+|| |||+||. +.|++|+|+|+ .+.+||-+.
T Consensus 8 DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~ 54 (488)
T 3dgz_A 8 DLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCV 54 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHH
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeec
Confidence 46666 9999987 57999999998 667899553
No 337
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=23.75 E-value=84 Score=29.98 Aligned_cols=30 Identities=10% Similarity=0.099 Sum_probs=23.6
Q ss_pred ceeehh----hHhHhhh---cCC---CCEEEEecCCCCCc
Q psy7666 79 LLLLVI----RILCTVL---RIS---TPITLLESSSRLGG 108 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G---~~VtVlEa~drvGG 108 (350)
.+|+|| |||+||. +.| .+|+|+|+.+.+|.
T Consensus 36 ~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~ 75 (490)
T 2bc0_A 36 SKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISF 75 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSB
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCc
Confidence 456666 9999987 446 99999999987764
No 338
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=23.57 E-value=94 Score=31.26 Aligned_cols=42 Identities=10% Similarity=0.001 Sum_probs=31.5
Q ss_pred HHHHHHHHHhhc-CCCEEEeCcceeEEEEeCCe---EEEEe-CCCce
Q psy7666 306 QTIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKG---VKAVD-QPIHQ 347 (350)
Q Consensus 306 ~~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~g---v~V~~-~~G~~ 347 (350)
..+..+|.+.+. .|++|+.+++|++|..++++ |.+.. .+|+.
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~ 204 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDI 204 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcE
Confidence 358888888876 78999999999999887664 44433 56653
No 339
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=23.24 E-value=1.1e+02 Score=26.73 Aligned_cols=33 Identities=15% Similarity=0.106 Sum_probs=26.1
Q ss_pred HHHHHHHHHhhc--CCCEEEeCcceeEEEEeCCeE
Q psy7666 306 QTIVNTLGEHLS--NKVEVKMDTTCTNLEFLEKGV 338 (350)
Q Consensus 306 ~~L~~aLa~~L~--~g~~I~l~~~V~~I~~~~~gv 338 (350)
..+...|.+.+. .|++|+++++|++|..+++++
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v 153 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRV 153 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEE
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeE
Confidence 456677777664 589999999999999887754
No 340
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=22.94 E-value=78 Score=29.50 Aligned_cols=31 Identities=23% Similarity=0.177 Sum_probs=24.6
Q ss_pred eeehh----hHhHhhh---c--CCCCEEEEecCCCCCcce
Q psy7666 80 LLLVI----RILCTVL---R--ISTPITLLESSSRLGGWV 110 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~--~G~~VtVlEa~drvGGRi 110 (350)
+|+|| +||+||. + .|++|+|+|+++..|++.
T Consensus 4 ~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~ 43 (430)
T 3h28_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP 43 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG
T ss_pred CEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC
Confidence 45555 9999987 4 689999999999877643
No 341
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=22.87 E-value=90 Score=29.15 Aligned_cols=27 Identities=22% Similarity=0.201 Sum_probs=20.9
Q ss_pred ceeehh----hHhHhhh---c--CCCCEEEEecCCC
Q psy7666 79 LLLLVI----RILCTVL---R--ISTPITLLESSSR 105 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~--~G~~VtVlEa~dr 105 (350)
|+|+|| |||+||. + .+++|||+|+++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 456666 9999986 2 3589999999875
No 342
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=22.10 E-value=59 Score=32.44 Aligned_cols=37 Identities=8% Similarity=0.047 Sum_probs=27.0
Q ss_pred HHHHHHHHhhc-CCC--EEEeCcceeEEEEeCC----eEEEEeC
Q psy7666 307 TIVNTLGEHLS-NKV--EVKMDTTCTNLEFLEK----GVKAVDQ 343 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~--~I~l~~~V~~I~~~~~----gv~V~~~ 343 (350)
.+.+.|.+.+. .|+ +|+++++|++|+.+++ +|.|+..
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~ 185 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLE 185 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEE
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEE
Confidence 35556666665 555 9999999999998763 5777654
No 343
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=21.50 E-value=50 Score=30.31 Aligned_cols=30 Identities=13% Similarity=0.016 Sum_probs=21.1
Q ss_pred ceeehh----hHhHhhh---cCCCCEEEEecCCCCCc
Q psy7666 79 LLLLVI----RILCTVL---RISTPITLLESSSRLGG 108 (350)
Q Consensus 79 ~~v~vi----aGLaaA~---~~G~~VtVlEa~drvGG 108 (350)
++++|| .|+-.|. +.|.+|+|+|+++++..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 457666 3443343 57999999999988654
No 344
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=20.75 E-value=75 Score=30.57 Aligned_cols=40 Identities=5% Similarity=-0.029 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhhcCCCEEEeCcceeEEEEeCC--------eEEEEeCCCc
Q psy7666 305 LQTIVNTLGEHLSNKVEVKMDTTCTNLEFLEK--------GVKAVDQPIH 346 (350)
Q Consensus 305 ~~~L~~aLa~~L~~g~~I~l~~~V~~I~~~~~--------gv~V~~~~G~ 346 (350)
+....+..++.+. ..|+++++|++|++.+. .|+|++.+++
T Consensus 147 ~~~Yl~~~A~~~~--~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~ 194 (501)
T 4b63_A 147 FEDYMRWCAQQFS--DVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVE 194 (501)
T ss_dssp HHHHHHHHHHTTG--GGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETT
T ss_pred HHHHHHHHHHHcC--CceEcceEEEeeccccccccccccceEEEEEecCC
Confidence 4445666777775 57999999999998653 4888876553
No 345
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=20.68 E-value=91 Score=27.62 Aligned_cols=41 Identities=10% Similarity=0.214 Sum_probs=27.9
Q ss_pred HHHHHHHHhhc-CCCEEEeCcceeEEEEeCCeEEE-EeCCCceec
Q psy7666 307 TIVNTLGEHLS-NKVEVKMDTTCTNLEFLEKGVKA-VDQPIHQMT 349 (350)
Q Consensus 307 ~L~~aLa~~L~-~g~~I~l~~~V~~I~~~~~gv~V-~~~~G~~~~ 349 (350)
.+.+.+.+.+. .|+++++++ |.+|.. ++.+.| .+.+|++++
T Consensus 72 ~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~ 114 (335)
T 2a87_A 72 ELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTHR 114 (335)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEE
T ss_pred HHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEE
Confidence 34455555454 578999997 999987 556777 777776543
No 346
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=20.51 E-value=1.1e+02 Score=30.66 Aligned_cols=43 Identities=2% Similarity=-0.034 Sum_probs=31.8
Q ss_pred HHHHHHHHHhhc--CCCEEEeCcceeEEEEeCCeE-EEEeCCCceec
Q psy7666 306 QTIVNTLGEHLS--NKVEVKMDTTCTNLEFLEKGV-KAVDQPIHQMT 349 (350)
Q Consensus 306 ~~L~~aLa~~L~--~g~~I~l~~~V~~I~~~~~gv-~V~~~~G~~~~ 349 (350)
..+.+.|.+.+. +|++| ++++|+.|..++++| .|.+.+|.+++
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~ 168 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYK 168 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEE
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEE
Confidence 446677777775 47898 688999999877765 57788886554
No 347
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=20.04 E-value=1.2e+02 Score=28.66 Aligned_cols=32 Identities=16% Similarity=0.206 Sum_probs=27.1
Q ss_pred eeehh----hHhHhhh---cCCCCEEEEecCCCCCcceE
Q psy7666 80 LLLVI----RILCTVL---RISTPITLLESSSRLGGWVR 111 (350)
Q Consensus 80 ~v~vi----aGLaaA~---~~G~~VtVlEa~drvGGRi~ 111 (350)
+|+|| |||+||. ++|++|+|+|+++++||.+.
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 35555 9999987 57999999999999999865
Done!