BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy767
(902 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195032542|ref|XP_001988519.1| GH10534 [Drosophila grimshawi]
gi|193904519|gb|EDW03386.1| GH10534 [Drosophila grimshawi]
Length = 1407
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/228 (48%), Positives = 154/228 (67%), Gaps = 11/228 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+VP+DISHYNALLRVYL+NEH F+PTDFLA++E++GIEPNRVTYQ LI+ +YCQ
Sbjct: 135 LNVPMDISHYNALLRVYLENEHQFAPTDFLAEIEAKGIEPNRVTYQHLIT------RYCQ 188
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+IEGAT+ILEFMR K+ P++E VFN+LI GHSQAND+ SA+GIL +M QAGLEPSA T
Sbjct: 189 QGDIEGATRILEFMRGKSLPVNENVFNSLILGHSQANDLESAKGILGVMRQAGLEPSADT 248
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
YT L+C +A+HGD+D+++ + +P+ + L + ++ +G+LT +
Sbjct: 249 YTTLLCAFARHGDIDALQATLAECEPKEIILLDKDLLDIIYTLTINGHGEHVDGLLTKLR 308
Query: 257 -QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-QSGSSLVNGDYLDI 302
AG Q ++ +G D +LL S+ VNG+ +D+
Sbjct: 309 ISAGFN---QDAVNIILRLVNNGYEDVALKLLRLMPRSTRVNGELVDV 353
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 164/593 (27%), Positives = 268/593 (45%), Gaps = 115/593 (19%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-QSGSSL-VNGDYLDIIHALAV 308
L + G+EP+ TY L+ Y + GD++ R+L G SL VN + + + +
Sbjct: 163 FLAEIEAKGIEPNRVTYQHLITRYCQQGDIEGATRILEFMRGKSLPVNENVFNSL----I 218
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
GH + D SA +M QAGLEPSA TYT L+C +A+HGD+D+++
Sbjct: 219 LGHSQANDLESAKGIL----------GVMRQAGLEPSADTYTTLLCAFARHGDIDALQAT 268
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQID 428
LA+ EII L++K +D
Sbjct: 269 LAECEPK-----------------------EII-------------------LLDKDLLD 286
Query: 429 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAA 488
Y + ING V G L + + G++ DA N I L+N G D A
Sbjct: 287 IIYTLT--------INGHGEHVDGLLTKLRI-----SAGFNQDAVNIILRLVNNGYEDVA 333
Query: 489 YRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVL 548
+++ + RS +NGE + VG F +R +VK N+P++K+L++C L E L+P+A +A
Sbjct: 334 LKLLRLMPRSTRVNGELVDVGAFYIRQLVKANRPVEKILSICRTLKAEGLNPKALTIAT- 392
Query: 549 IKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEV 608
+A + GA+ A P LQ + +L I
Sbjct: 393 -EAGL----TNGAMNN---------ALP----------------LLQEMKNLGLPIRQ-- 420
Query: 609 NSLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSV 668
+ + L S ++VL I++ + EF + N+ET+RDYV+P L N + + LR
Sbjct: 421 HYFWPLFCSVDTSQVLDIVRRMQQEFALNPNSETIRDYVIPNLKEKNW--ERIVTVLRDA 478
Query: 669 GVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLVTV 728
GV + ++ V L H L +AA + + RA+Y ++ R L ++ T D S +
Sbjct: 479 GVPNSTAVTSAVYAALSTHQLADAAKIMEQNRAYYVPMLFRQPLIMALGSTNDFASFIRC 538
Query: 729 VRAVCENWE--KGEEGEKEEEGEEKTAGQLIDMDR---IFAGNVLLDIYKATRQDPNVVS 783
VR + E + G + EE E+ A +D++R G+++ + R++ V
Sbjct: 539 VRQMHEGLQIRNGAVKDSVEETEQVAAN--VDVERNTPDVVGSIVYEAANYFRRER--VP 594
Query: 784 HLEQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPL 836
LE++L V+ + +S+ ++ + LGS +T IS+ LG L+S +L P PL
Sbjct: 595 MLEKILQGLVKQGLSVSSTTATTLSELLGSEMTPLISEQLGKLSSGELEPIPL 647
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 81/158 (51%), Gaps = 28/158 (17%)
Query: 474 NHIYHLINKGQ-----IDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLA 528
N L N G+ I +RI+N +A + N DK+
Sbjct: 776 NQKETLFNDGEGSFNYISTVWRILNAIAETGNA----------------------DKLKR 813
Query: 529 VCHRLTDEN-LHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQ 587
V L N + P L L+K H+ ++D A++ FE Q +ATPWK EL R IQ
Sbjct: 814 VFDALVTGNYVVPTNVLLGPLVKVHLSRDDIPKAIDAFEQICQQHKATPWKNELACRLIQ 873
Query: 588 AEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLR 625
EDAA LQR+TDLSTSIHGEVNSLYDL+ SF++ +R
Sbjct: 874 KEDAANLQRLTDLSTSIHGEVNSLYDLVFSFVECGRVR 911
>gi|195388264|ref|XP_002052803.1| GJ19834 [Drosophila virilis]
gi|194149260|gb|EDW64958.1| GJ19834 [Drosophila virilis]
Length = 1413
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 93/152 (61%), Positives = 127/152 (83%), Gaps = 6/152 (3%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+VP+DISHYNALLRVYL+NEH F+PTDFLA++E++GIEPNRVTYQ +LI++YCQ
Sbjct: 135 LNVPMDISHYNALLRVYLENEHQFAPTDFLAEIEAKGIEPNRVTYQ------RLIARYCQ 188
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+IEGAT+ILE+MR K+ P++E VFN+LI GHSQAND+ SA+GIL +M QAGLEPSA T
Sbjct: 189 QGDIEGATRILEYMRGKSLPVNENVFNSLILGHSQANDLESAKGILGVMKQAGLEPSADT 248
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
YT L+C +A+HGD++++++ + +P+ + L
Sbjct: 249 YTTLLCAFARHGDIEALQSTLAECEPKEIILL 280
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 165/600 (27%), Positives = 265/600 (44%), Gaps = 127/600 (21%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-QSGSSL-VNGDYLDIIHALAV 308
L + G+EP+ TY +L+ Y + GD++ R+L G SL VN + + + +
Sbjct: 163 FLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEYMRGKSLPVNENVFNSL----I 218
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
GH + D SA +M QAGLEPSA TYT L+C +A+HGD+++++
Sbjct: 219 LGHSQANDLESAKGIL----------GVMKQAGLEPSADTYTTLLCAFARHGDIEALQST 268
Query: 369 LAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
LA+ L++ D LDI++ L V GHGE H+ L+ K
Sbjct: 269 LAECEPKEIILLDKDLLDIVYTLTVHGHGE---------------------HVDALLGKL 307
Query: 426 QIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQI 485
+I G++ DA N I L+NKG
Sbjct: 308 RISP-------------------------------------GFNQDAVNIILRLVNKGYE 330
Query: 486 DAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNL 545
D A +++ + R +NGE + VG F +R +VK N+P++K+L++C L E L+P+A +
Sbjct: 331 DVALKLLRLMPRGTRVNGEPVDVGAFFIRQLVKANRPVEKILSICRTLQAEGLNPKALTI 390
Query: 546 AVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIH 605
A + T V A P LQ + L I
Sbjct: 391 AT-------EAGLTNGVMN--------NALP----------------LLQEMKQLGLPIR 419
Query: 606 GEVNSLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQL 665
+ + L S +VL +++ + EF + N+ET+RDY++P L N V + L
Sbjct: 420 Q--HYFWPLFCSVESNQVLDVVRRMQQEFALNPNSETVRDYIIPNLKEKNW--ERVVTVL 475
Query: 666 RSVGVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSL 725
R GV + ++ V L H + +AA + ++ RA+Y V+ R L ++ T D S
Sbjct: 476 RDAGVANSTAVTSAVYAALTTHQIADAARIMEAHRAYYMPVIFRQPLILALSNTNDFASF 535
Query: 726 VTVVRAVCENW------EKGEEGEK---EEEGEEKTAGQLIDMDRIFAGNVLLDIYKATR 776
+ VR + E E EEGE+ + E + ID+ G ++ D R
Sbjct: 536 IRCVRQMHEGMQLRAGKEAAEEGERVASDAEADATPERNTIDV----VGTIVHDAAIYFR 591
Query: 777 QDPNVVSHLEQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPL 836
++ V LE++L V+ + IS+ + + LGS +T I++ LG L+S +L P PL
Sbjct: 592 RER--VPVLEKILQGLVKQGLSISSAKATALSELLGSEMTPKIAEELGKLSSGELEPIPL 649
Score = 105 bits (261), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 98/167 (58%), Gaps = 9/167 (5%)
Query: 156 PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT 215
P+ +NAL+ + + + L + G+EP+ TY +L+ Y + GD++
Sbjct: 138 PMDISHYNALLRVYLENEHQFAPTDFLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATR 197
Query: 216 KIPSLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
+ ++ +S L + + N LIL ++D+ SA+GIL +M QAGLEPSA TYT L+C
Sbjct: 198 ILEYMRGKS---LPVNENVFNSLILGHSQANDLESAKGILGVMKQAGLEPSADTYTTLLC 254
Query: 273 GYAKHGDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYID 316
+A+HGD+++++ LA+ L++ D LDI++ L V GHGE++D
Sbjct: 255 AFARHGDIEALQSTLAECEPKEIILLDKDLLDIVYTLTVHGHGEHVD 301
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 59/86 (68%)
Query: 540 PRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITD 599
P L LIK H+ ++D A++ FE Q +ATPWK EL R IQ EDAA LQR+TD
Sbjct: 828 PTNVVLGPLIKVHLARDDIPKAIDAFEQICQQHKATPWKNELACRLIQKEDAANLQRLTD 887
Query: 600 LSTSIHGEVNSLYDLMLSFLDAEVLR 625
LSTSIHGEVNSLYDL+ SF++ +R
Sbjct: 888 LSTSIHGEVNSLYDLVFSFVECGRVR 913
>gi|195115116|ref|XP_002002110.1| GI17203 [Drosophila mojavensis]
gi|193912685|gb|EDW11552.1| GI17203 [Drosophila mojavensis]
Length = 1406
Score = 214 bits (544), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 159/231 (68%), Gaps = 17/231 (7%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+VP+DISHYNALLRVYL+NEH F+PTDFLA++E++GIEPNRVTYQ +LI++YCQ
Sbjct: 135 LNVPMDISHYNALLRVYLENEHQFAPTDFLAEIEAKGIEPNRVTYQ------RLIARYCQ 188
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+IEGAT+ILE+MR K P++E VFN+LI GHSQAND+ SA GIL +M QAGLEP+A T
Sbjct: 189 QGDIEGATRILEYMRGKKLPVNENVFNSLILGHSQANDLESARGILGVMKQAGLEPTADT 248
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA---SAEGILT 253
YT L+C +A+HGD++++++ + +P+ E+ L L L+ V+ +A + E +
Sbjct: 249 YTTLLCAFARHGDIEALQSTLAECEPK-EIIL-----LDKDLLDVAYTLAVHGNGEHVDA 302
Query: 254 MMSQAGLEPS-AQTYTKLMCGYAKHGDMDSVRRLLA-QSGSSLVNGDYLDI 302
++S+ + P Q ++ G D +LL +S VNG+ +D+
Sbjct: 303 VLSKLRISPGFNQDAVNIILRLVNKGQEDVALKLLRLMPRNSRVNGEPVDV 353
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 162/597 (27%), Positives = 264/597 (44%), Gaps = 121/597 (20%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-QSGSSL-VNGDYLDIIHALAV 308
L + G+EP+ TY +L+ Y + GD++ R+L G L VN + + + +
Sbjct: 163 FLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEYMRGKKLPVNENVFNSL----I 218
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
GH + D SA + G +M QAGLEP+A TYT L+C +A+HGD+++++
Sbjct: 219 LGHSQANDLESA---------RGILG-VMKQAGLEPTADTYTTLLCAFARHGDIEALQST 268
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQID 428
LA+ EII L++K +D
Sbjct: 269 LAECEPK-----------------------EII-------------------LLDKDLLD 286
Query: 429 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAA 488
AY TLA + NGE V L + + G++ DA N I L+NKGQ D A
Sbjct: 287 VAY----TLA--VHGNGEH--VDAVLSKLRISP-----GFNQDAVNIILRLVNKGQEDVA 333
Query: 489 YRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVL 548
+++ + R++ +NGE + VG F +R +VK N+P++K+L++C L E L+P+A +A
Sbjct: 334 LKLLRLMPRNSRVNGEPVDVGAFFIRQLVKANRPVEKILSICRTLQSEGLNPKALTIAT- 392
Query: 549 IKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEV 608
+ T V A P L + +L I
Sbjct: 393 ------EAGLTNGVMN--------NALP----------------LLHEMKNLGLPIRQ-- 420
Query: 609 NSLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSV 668
+ + L S +VL +++ + +F + N+ET+RDYV+P L N V + LR
Sbjct: 421 HYFWPLFCSVDSNQVLDVVRRMQQDFALNPNSETVRDYVIPNLKEKNW--DRVVTVLRDA 478
Query: 669 GVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLVTV 728
GV + S+ V L H++ +AA + + RA+Y ++ R L ++ T D S +
Sbjct: 479 GVPNSTAVSSAVYAALTTHHIADAAKIMEQNRAYYMPLIFRQPLILALAHTNDFASFIRC 538
Query: 729 VRAVCENWE---------KGEEGEKEEEGEEKTAGQLIDMDRIFAGNVLLDIYKATRQDP 779
VR V E + + E + E Q D+ G ++ D R++
Sbjct: 539 VRQVYEGLQLRAGKEATEEAAEAATDGEAPATPERQTPDV----VGQIVYDAAIYFRRE- 593
Query: 780 NVVSHLEQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPL 836
V LE++L V + +S+ + + LGS +T I++ LG LTS +L P PL
Sbjct: 594 -RVPTLEKILQGLVNQGLSLSSGKATALSELLGSEMTPKIAEQLGKLTSGELEPIPL 649
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 88/169 (52%), Gaps = 28/169 (16%)
Query: 457 HMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHM 516
++K NQ A + Y + +RI+N++A + N E+L V + +
Sbjct: 773 QLLKENQKEAAVEAGEGSFNY-------VSTVWRILNSIAETGN--AERLKV---VFDAL 820
Query: 517 VKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATP 576
V N + P L LIK H+ ++D A++ FE Q++ATP
Sbjct: 821 VAGNYVV----------------PTNVLLGPLIKVHLSRDDIPKAIDAFEQICQQYKATP 864
Query: 577 WKGELLKRFIQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLR 625
WK EL R IQ EDAA LQR+TDLSTSIHGEVNSLYDL+ SF++ +R
Sbjct: 865 WKNELACRLIQKEDAANLQRLTDLSTSIHGEVNSLYDLVFSFVECGRVR 913
>gi|195579884|ref|XP_002079789.1| GD21832 [Drosophila simulans]
gi|194191798|gb|EDX05374.1| GD21832 [Drosophila simulans]
Length = 1412
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/228 (49%), Positives = 156/228 (68%), Gaps = 11/228 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+VP+DISHYNALLRVYL+NEH F+PTDFLA++E++GIEPNRVTYQ +LI++YCQ
Sbjct: 134 LNVPMDISHYNALLRVYLENEHGFAPTDFLAEIEAKGIEPNRVTYQ------RLIARYCQ 187
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+IEGAT+ILEFMR K+ P++E VFN+LI GHSQAND+ SA+GIL +M QAGLEPSA T
Sbjct: 188 QGDIEGATRILEFMRAKSLPVNENVFNSLILGHSQANDLESAKGILGVMKQAGLEPSADT 247
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
YT L+C +A+HGD+ ++K I Q E+ L L +++ ++ + + E + ++
Sbjct: 248 YTTLLCAFARHGDLAAVKETIAECD-QKEIIL-LDKDLLDIVYTLTVN-GNGEHVDEILP 304
Query: 257 QAGLEPS-AQTYTKLMCGYAKHGDMDSVRRLL-AQSGSSLVNGDYLDI 302
+ L P Q ++ G D +LL SS VNG+ +D+
Sbjct: 305 KLRLSPGFNQDAVNVILRLVNKGHEDVGLKLLRVMPRSSRVNGEPVDV 352
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 163/592 (27%), Positives = 266/592 (44%), Gaps = 113/592 (19%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAV 308
L + G+EP+ TY +L+ Y + GD++ R+L ++ S VN + + + +
Sbjct: 162 FLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSL----I 217
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
GH + D SA +M QAGLEPSA TYT L+C +A+HGD+ +++
Sbjct: 218 LGHSQANDLESAKGIL----------GVMKQAGLEPSADTYTTLLCAFARHGDLAAVKET 267
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQID 428
+A+ D +II L++K +D
Sbjct: 268 IAE-------CDQKEII-----------------------------------LLDKDLLD 285
Query: 429 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAA 488
Y + + N NGE V ++ + G++ DA N I L+NKG D
Sbjct: 286 IVYTL------TVNGNGEH-------VDEILPKLRLSPGFNQDAVNVILRLVNKGHEDVG 332
Query: 489 YRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVL 548
+++ + RS+ +NGE + VG F +R MVK N+P++K+L++C L E L+P+A +A
Sbjct: 333 LKLLRVMPRSSRVNGEPVDVGAFFIRQMVKANRPVEKILSICKSLQSEGLNPKALTIAT- 391
Query: 549 IKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEV 608
+A + G + A P LQ + + I
Sbjct: 392 -EAGL----ANGVINN---------ALP----------------LLQEMKNAGLPIRQ-- 419
Query: 609 NSLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSV 668
+ + L+ S +VL I++ + EF V N+ET+RDYV+P L N + + LR
Sbjct: 420 HYFWPLICSAESNQVLEIVRRMQQEFSVFPNSETVRDYVIPNLKEKNW--ERIVTSLRDA 477
Query: 669 GVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLVTV 728
GV + ++ V L H + EAA + + RA+Y + + L ++ T D S +
Sbjct: 478 GVPNSTAVTSAVYSALVTHQIAEAAKIMEKNRAYYMPFLFKQPLILALSHTNDYASFIRC 537
Query: 729 VRAVCENWEKGEEGEKEEEGEEKTAGQLIDMDRIFAGNVLLDIYKAT---RQDPNVVSHL 785
VR + E + + E+E E E A + +RI V + +AT R+D L
Sbjct: 538 VRQIHEGLQLRQGKEEEVEQVEGVAA--VPTERITPDVVGAIVQEATNYFRRDRG--DTL 593
Query: 786 EQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPLQ 837
E++L V+ + IS+ + + LGS LT IS+ LG L+S +L P PLQ
Sbjct: 594 EKILKGLVKQGLSISSAKATQLSEQLGSELTPKISELLGKLSSGELEPVPLQ 645
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 91/160 (56%), Gaps = 21/160 (13%)
Query: 479 LINKGQIDAAYRIVNTLARSANINGEQLPV----GGF--------LVRHMVKTNQPIDKV 526
L+ + ++DAA++++ N ++ PV G + ++ + + QP +++
Sbjct: 757 LLQEERVDAAFKVLEE-------NKKEAPVAEADGSYNYMSTVWRILNSLAEAGQP-ERL 808
Query: 527 LAVCHRLTDEN-LHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRF 585
+ L N + P L LIK H++K+D A+E FE + ++TPWK EL R
Sbjct: 809 RKLFDALVGANYIVPTNVLLGPLIKVHLVKDDIPKAIEAFEEICQKHKSTPWKNELACRL 868
Query: 586 IQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLR 625
IQ EDAA LQ++TDLST IHGEVNSLYDL+ SF++ +R
Sbjct: 869 IQKEDAANLQKLTDLSTGIHGEVNSLYDLVFSFVECGRVR 908
>gi|195344822|ref|XP_002038978.1| GM17088 [Drosophila sechellia]
gi|194134108|gb|EDW55624.1| GM17088 [Drosophila sechellia]
Length = 1412
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/228 (49%), Positives = 156/228 (68%), Gaps = 11/228 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+VP+DISHYNALLRVYL+NEH F+PTDFLA++E++GIEPNRVTYQ +LI++YCQ
Sbjct: 134 LNVPMDISHYNALLRVYLENEHGFAPTDFLAEIEAKGIEPNRVTYQ------RLIARYCQ 187
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+IEGAT+ILEFMR K+ P++E VFN+LI GHSQAND+ SA+GIL +M QAGLEPSA T
Sbjct: 188 QGDIEGATRILEFMRAKSLPVNENVFNSLILGHSQANDLESAKGILGVMKQAGLEPSADT 247
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
YT L+C +A+HGD+ ++K I Q E+ L L +++ ++ + + E + ++
Sbjct: 248 YTTLLCAFARHGDLAAVKETIAECD-QKEIIL-LDKDLLDIVYTLTVN-GNGEHVDEILP 304
Query: 257 QAGLEPS-AQTYTKLMCGYAKHGDMDSVRRLL-AQSGSSLVNGDYLDI 302
+ L P Q ++ G D +LL SS VNG+ +D+
Sbjct: 305 KLRLSPGFNQDAVNVILRLVNKGHEDVGLKLLRVMPRSSRVNGEPVDV 352
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 163/591 (27%), Positives = 265/591 (44%), Gaps = 113/591 (19%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAV 308
L + G+EP+ TY +L+ Y + GD++ R+L ++ S VN + + + +
Sbjct: 162 FLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSL----I 217
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
GH + D SA +M QAGLEPSA TYT L+C +A+HGD+ +++
Sbjct: 218 LGHSQANDLESAKGIL----------GVMKQAGLEPSADTYTTLLCAFARHGDLAAVKET 267
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQID 428
+A+ D +II L++K +D
Sbjct: 268 IAE-------CDQKEII-----------------------------------LLDKDLLD 285
Query: 429 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAA 488
Y + + N NGE V ++ + G++ DA N I L+NKG D
Sbjct: 286 IVYTL------TVNGNGEH-------VDEILPKLRLSPGFNQDAVNVILRLVNKGHEDVG 332
Query: 489 YRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVL 548
+++ + RS+ +NGE + VG F +R MVK N+P++K+L++C L E L+P+A +A
Sbjct: 333 LKLLRVMPRSSRVNGEPVDVGAFFIRQMVKANRPVEKILSICKSLQSEGLNPKALTIAT- 391
Query: 549 IKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEV 608
+ T V +N A P LQ + + I
Sbjct: 392 ------EAGLTNGV------INN--ALP----------------LLQEMKNAGLPIRQ-- 419
Query: 609 NSLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSV 668
+ + L+ S +VL I++ + EF V N+ET+RDYV+P L N + + LR
Sbjct: 420 HYFWPLICSAESNQVLEIVRRMQQEFSVFPNSETVRDYVIPNLKEKNW--ERIVTSLRDA 477
Query: 669 GVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLVTV 728
GV + ++ V L H + EAA + + RA+Y + + L ++ T D S +
Sbjct: 478 GVPNSTAVTSAVYSALVTHQIAEAAKIMEKNRAYYMPFLFKQPLILALSHTNDYASFIRC 537
Query: 729 VRAVCENWEKGEEGEKEEEGEEKTAGQLIDMDRIFAGNVLLDIYKAT---RQDPNVVSHL 785
VR + E + + E+E E E A + +RI V + +AT R+D L
Sbjct: 538 VRQIHEGLQLRQGKEEEVEQVEGVAA--VPTERITPDVVGAIVQEATNYFRRDRG--DTL 593
Query: 786 EQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPL 836
E++L V+ + IS+ + + LGS LT IS+ LG L+S +L P PL
Sbjct: 594 EKILKGLVKQGLSISSAKATQLSEQLGSELTPKISELLGKLSSGELEPVPL 644
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 91/160 (56%), Gaps = 21/160 (13%)
Query: 479 LINKGQIDAAYRIVNTLARSANINGEQLPV----GGF--------LVRHMVKTNQPIDKV 526
L+ + ++DAA++++ N ++ PV G + ++ + + QP +++
Sbjct: 757 LLQEERVDAAFKVLEE-------NKKEAPVAEADGSYNYMSTVWRILNSLAEAGQP-ERL 808
Query: 527 LAVCHRLTDEN-LHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRF 585
+ L N + P L LIK H++K+D A+E FE + ++TPWK EL R
Sbjct: 809 RKLFDALVGANYIVPTNVLLGPLIKVHLVKDDIPKAIEAFEEICQKHKSTPWKNELACRL 868
Query: 586 IQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLR 625
IQ EDAA LQ++TDLST IHGEVNSLYDL+ SF++ +R
Sbjct: 869 IQKEDAANLQKLTDLSTGIHGEVNSLYDLVFSFVECGRVR 908
>gi|158293558|ref|XP_557938.3| AGAP008770-PA [Anopheles gambiae str. PEST]
gi|157016766|gb|EAL40302.3| AGAP008770-PA [Anopheles gambiae str. PEST]
Length = 1397
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/152 (66%), Positives = 124/152 (81%), Gaps = 7/152 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+V +D+SHYNALLRVYLDNEH FSPT+FLA L+S+GIEPNRVTYQ +LIS+YCQ
Sbjct: 132 LNVAMDVSHYNALLRVYLDNEHPFSPTEFLADLQSKGIEPNRVTYQ------RLISRYCQ 185
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+IEGAT+ILEFMR+K P++E VFNALI GHSQA+D+ SA GIL +M+QAGL+PSA T
Sbjct: 186 QGDIEGATRILEFMREKQLPVNEYVFNALIMGHSQADDLESATGILAVMAQAGLQPSADT 245
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
YT L+CGYA+ GD+D I I S + Q E+FL
Sbjct: 246 YTTLLCGYARKGDIDYICKTIDSCE-QKEIFL 276
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 171/627 (27%), Positives = 276/627 (44%), Gaps = 118/627 (18%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-QSGSSLVNGDYLDIIHALAVS 309
L + G+EP+ TY +L+ Y + GD++ R+L L +Y + +AL +
Sbjct: 160 FLADLQSKGIEPNRVTYQRLISRYCQQGDIEGATRILEFMREKQLPVNEY--VFNAL-IM 216
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
GH + D SA +M+QAGL+PSA TYT L+CGYA+ GD+D I + +
Sbjct: 217 GHSQADDLESATGILA----------VMAQAGLQPSADTYTTLLCGYARKGDIDYICKTI 266
Query: 370 ---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQ 426
Q L++ D L+II++LA +GH E +D
Sbjct: 267 DSCEQKEIFLLDKDILEIIYSLATNGHPEKVD---------------------------- 298
Query: 427 IDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQID 486
R+V + R A GY+ DA N I LIN+G +
Sbjct: 299 -----RLVEKIRRQA-------------------------GYNQDAVNVILRLINRGYEE 328
Query: 487 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLA 546
+++ T+ R++ +GE G FLVR +V+ +P +KV+ +C L D ++ RA+ +A
Sbjct: 329 VGLKVLRTMPRASKNDGELANTGSFLVRQLVRAKRPAEKVVEICKELQDGGMNDRAYLIA 388
Query: 547 VLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHG 606
++A + + + E V Q + P + + A D +
Sbjct: 389 --LEAALKGGEVELSFALLEELVKQNQ--PIRQHFFWPLMCANDPKWTKEERT------- 437
Query: 607 EVNSLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLR 666
VL +L+ +F + + ET+R+Y +P L N S V LR
Sbjct: 438 --------------ERVLNVLRSMAEKFKLYPSGETVREYAVPNLPVSN--SEIVIQLLR 481
Query: 667 SVGVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLV 726
S G+++ +S+ L ++NLKEAA +A +RA Y+ + R LA + L+++D+ S V
Sbjct: 482 SAGISLAVASSSCAYVALERNNLKEAANIAARYRAFYSPGIYRKPLAQALLQSRDVDSYV 541
Query: 727 TVVRAVCENWEKGEEGEKEEE--------GEEKTAGQLIDMDRIFAGNVLLDIYKATRQD 778
RA+ + + GE+E E G A Q M GN++ D A + D
Sbjct: 542 RFARAMHDGLVRNRSGEEESEPVAEGESNGNSTEAVQAETM-----GNLIYDAVGAFKTD 596
Query: 779 PNVVSHLEQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPLQY 838
V + ++L FV + IS ++ IQ +GS +T+DIS L L + DL P L+
Sbjct: 597 R--VEMVRKILTGFVNQGLSISNGLAEKIQERMGSEMTADISSMLSKLAAGDLEPIELER 654
Query: 839 VPSMFIPRGQ-PLRCLDKDPLRRWSCD 864
P+ R + P+ L L R D
Sbjct: 655 KPAQGQQRQKTPIASLSVPQLERLVAD 681
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 76/139 (54%), Gaps = 21/139 (15%)
Query: 487 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLA 546
A +R++NTLA ++ + NQ D H + + P+ L
Sbjct: 816 ACWRLLNTLADRGSVQ---------------QVNQMFD------HLMDKGYITPQNIFLG 854
Query: 547 VLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHG 606
LIK H++++D A+ TF + R TPWK EL R IQAEDA LQR+TDLST +HG
Sbjct: 855 SLIKVHLVRDDLPAAMNTFADICQKHRTTPWKTELTCRLIQAEDATNLQRLTDLSTEVHG 914
Query: 607 EVNSLYDLMLSFLDAEVLR 625
EVNSLYDL+ +F+D +R
Sbjct: 915 EVNSLYDLVFAFVDCGRIR 933
Score = 97.8 bits (242), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 143/313 (45%), Gaps = 49/313 (15%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + S L + G+EP+ TY +L+ Y + GD++ T+I L+
Sbjct: 141 YNALLRVYLDNEHPFSPTEFLADLQSKGIEPNRVTYQRLISRYCQQGDIEGA-TRI--LE 197
Query: 222 PQSELFLCFSFQLTNLLILVSS---DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
E L + + N LI+ S D+ SA GIL +M+QAGL+PSA TYT L+CGYA+ G
Sbjct: 198 FMREKQLPVNEYVFNALIMGHSQADDLESATGILAVMAQAGLQPSADTYTTLLCGYARKG 257
Query: 279 DMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
D+D + + + Q L++ D L+II++LA +GH E +D L
Sbjct: 258 DIDYICKTIDSCEQKEIFLLDKDILEIIYSLATNGHPEKVDR--------------LVEK 303
Query: 336 MMSQAGLEPSAQTYTKLMC--GYAKHGDMDSIRRL--LAQNGSSLVNGDYLDIIHALAVS 391
+ QAG A + GY + G + +R + ++N L N + +
Sbjct: 304 IRRQAGYNQDAVNVILRLINRGYEEVG-LKVLRTMPRASKNDGELANTGSFLVRQLVRAK 362
Query: 392 GHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVG 451
E + EI ++Q G G D AY I A A + G ++ +
Sbjct: 363 RPAEKVVEICKELQDG-----------------GMNDRAYLI----ALEAALKGGEVELS 401
Query: 452 GFLVRHMVKTNQP 464
L+ +VK NQP
Sbjct: 402 FALLEELVKQNQP 414
>gi|24584970|ref|NP_523596.2| bicoid stability factor [Drosophila melanogaster]
gi|22946750|gb|AAF53668.2| bicoid stability factor [Drosophila melanogaster]
Length = 1412
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 158/228 (69%), Gaps = 11/228 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+VP+DISHYNALLRVYL+NEH F+PTDFLA++E++GIEPNRVTYQ +LI++YCQ
Sbjct: 134 LNVPMDISHYNALLRVYLENEHGFAPTDFLAEIEAKGIEPNRVTYQ------RLIARYCQ 187
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+IEGAT+ILEFMR K+ P++E VFN+LI GHSQAND+ SA+GIL +M QAGLEPSA T
Sbjct: 188 QGDIEGATRILEFMRAKSLPVNENVFNSLILGHSQANDLESAKGILGVMMQAGLEPSADT 247
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
YT L+C +A+HGD+ ++K + + Q E+ L L +++ ++ + + E + +++
Sbjct: 248 YTTLLCAFARHGDLAAVKETLAECE-QKEIIL-LDKDLLDIVYTLTVN-GNGEHVDDVLT 304
Query: 257 QAGLEPS-AQTYTKLMCGYAKHGDMDSVRRLL-AQSGSSLVNGDYLDI 302
+ L P Q ++ G D +LL SS VNG+ +D+
Sbjct: 305 KLRLSPGFNQDAVNVILRLVNKGHEDVGLKLLRVMPRSSRVNGEPVDV 352
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 167/592 (28%), Positives = 267/592 (45%), Gaps = 117/592 (19%)
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAVS 309
L + G+EP+ TY +L+ Y + GD++ R+L ++ S VN + + + +
Sbjct: 163 LAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSL----IL 218
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
GH + D SA + G MM QAGLEPSA TYT L+C +A+HGD+ +++ L
Sbjct: 219 GHSQANDLESA---------KGILGVMM-QAGLEPSADTYTTLLCAFARHGDLAAVKETL 268
Query: 370 AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDA 429
A+ EII L++K +D
Sbjct: 269 AECEQK-----------------------EII-------------------LLDKDLLDI 286
Query: 430 AYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAY 489
Y + + N NGE V L + + G++ DA N I L+NKG D
Sbjct: 287 VYTL------TVNGNGEH--VDDVLTKLRLSP-----GFNQDAVNVILRLVNKGHEDVGL 333
Query: 490 RIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLI 549
+++ + RS+ +NGE + VG F +R MVK N+P++K+L++C L E L+P+A +A
Sbjct: 334 KLLRVMPRSSRVNGEPVDVGAFFIRQMVKANRPVEKILSICKSLQSEGLNPKALTIAT-- 391
Query: 550 KAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEVN 609
+ T V +N A P LQ + + I +
Sbjct: 392 -----EAGLTNGV------INN--ALP----------------LLQEMKNAGLPIRQ--H 420
Query: 610 SLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSVG 669
+ L+ S +VL I++ + EF V N+ET+RDYV+P L N + + LR G
Sbjct: 421 YFWPLICSAESNQVLEIVRRMQQEFSVFPNSETVRDYVIPNLKEKNW--ERIVTSLRDAG 478
Query: 670 VTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLVTVV 729
V + ++ V L H + EAA + + RA+Y + + L ++ T D S + V
Sbjct: 479 VPNSTAVTSAVYSALVTHQIAEAAKIMEKNRAYYVPFLFKQPLILALSHTNDYASFIRCV 538
Query: 730 RAVCE--NWEKGEEGEKEEEGEEKTAGQLIDMDRIFAGNVLLDIYKAT---RQDPNVVSH 784
R + E + +G K+EE E+ + +RI V + +AT R+D
Sbjct: 539 RQIHEGLQFRQG----KDEEVEQVEGVAAVPTERITPDVVGAIVQEATTYFRRDRGAT-- 592
Query: 785 LEQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPL 836
LE++L V+ + IS+ + + LGS LT IS+ LG L+S +L P PL
Sbjct: 593 LEKILKGLVKQGLSISSDKATQLSEQLGSELTPKISELLGKLSSGELEPVPL 644
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 93/160 (58%), Gaps = 21/160 (13%)
Query: 479 LINKGQIDAAYRIVNTLARSANINGEQLPV----GGF--------LVRHMVKTNQPIDKV 526
L+ + ++DAA++I+ N +++PV G + ++ + + QP +++
Sbjct: 757 LLQEERVDAAFKILEE-------NKKEVPVAEAEGSYNYMSTVWRILNSLAEAGQP-ERL 808
Query: 527 LAVCHRLTDEN-LHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRF 585
+ L N + P L LIK H++K+D A+E FE ++++TPWK EL R
Sbjct: 809 RKLFDVLVGANYIVPTNVLLGPLIKVHLVKDDIPKAIEAFEEICQKYKSTPWKNELACRL 868
Query: 586 IQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLR 625
IQ EDAA LQ++TDLST IHGEVNSLYDL+ SF++ +R
Sbjct: 869 IQKEDAANLQKLTDLSTGIHGEVNSLYDLVFSFVECGRVR 908
>gi|194880213|ref|XP_001974384.1| GG21707 [Drosophila erecta]
gi|190657571|gb|EDV54784.1| GG21707 [Drosophila erecta]
Length = 1412
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 113/229 (49%), Positives = 156/229 (68%), Gaps = 13/229 (5%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+VP+DISHYNALLRVYL+NEH F+PTDFLA++E++GIEPNRVTYQ +LI++YCQ
Sbjct: 134 LNVPMDISHYNALLRVYLENEHGFAPTDFLAEIEAKGIEPNRVTYQ------RLIARYCQ 187
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+IEGAT+ILEFMR K+ P++E VFN+LI GHSQAND+ SA+GIL +M QAGLEPSA T
Sbjct: 188 QGDIEGATRILEFMRAKSLPVNENVFNSLILGHSQANDLESAKGILGVMKQAGLEPSADT 247
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL-VSSDMASAEGILTMM 255
YT L+C +A+HGD+ ++K + + Q E+ L L + L V+ ++ + + +LT +
Sbjct: 248 YTTLLCAFARHGDLAALKETLTECE-QKEIILLDKDLLDIVYTLTVNGNVENVDEVLTKL 306
Query: 256 S-QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL-AQSGSSLVNGDYLDI 302
G Q ++ G D +LL SS VNG+ +D+
Sbjct: 307 RLSRGFN---QDAVNVILRLVNKGHEDVGLKLLRVMPRSSRVNGEPVDV 352
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 162/594 (27%), Positives = 261/594 (43%), Gaps = 119/594 (20%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAV 308
L + G+EP+ TY +L+ Y + GD++ R+L ++ S VN + + + +
Sbjct: 162 FLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSL----I 217
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
GH + D SA +M QAGLEPSA TYT L+C +A+HGD+ +++
Sbjct: 218 LGHSQANDLESAKGIL----------GVMKQAGLEPSADTYTTLLCAFARHGDLAALKET 267
Query: 369 LA---QNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
L Q L++ D LDI+ Y L G
Sbjct: 268 LTECEQKEIILLDKDLLDIV---------------------------------YTLTVNG 294
Query: 426 QIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQI 485
++ ++ L S G++ DA N I L+NKG
Sbjct: 295 NVENVDEVLTKLRLSR-------------------------GFNQDAVNVILRLVNKGHE 329
Query: 486 DAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNL 545
D +++ + RS+ +NGE + VG F +R MVK N+P++K+L++C L E L+P+A +
Sbjct: 330 DVGLKLLRVMPRSSRVNGEPVDVGAFFIRQMVKANRPVEKILSICKSLQSEGLNPKALTI 389
Query: 546 AVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIH 605
A + T V VN A P LQ + + I
Sbjct: 390 AT-------EAGLTNGV------VNN--ALP----------------LLQEMKNAGLPIR 418
Query: 606 GEVNSLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQL 665
+ + L+ S +VL I++ + EF V N+ET+RDYV+P + N + + L
Sbjct: 419 Q--HYFWPLICSAESNQVLEIVRRMQQEFSVFPNSETVRDYVIPNMKEKNW--ERIVTSL 474
Query: 666 RSVGVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSL 725
R G+ + ++ V L H + EAA + + RA+Y + + L ++ T D S
Sbjct: 475 RDAGIPNSTAVTSTVYSALVTHQIAEAAKIMEKNRAYYMPFLFKQPLILALSHTNDYASF 534
Query: 726 VTVVRAVCENWEKGEEGEKEEEGEEKTAGQLIDMDRIFAGNVLLDIYKAT---RQDPNVV 782
+ VR + E + + E+E E E A + +RI V + +AT R+D
Sbjct: 535 IRCVRQIHEGLQFRQGKEEEVEQVEGGAA--VPTERITPDVVGAIVQEATTYFRRDRGAT 592
Query: 783 SHLEQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPL 836
LE++LN V+ + IS+ + + LGS LT IS+ LG L+S +L P PL
Sbjct: 593 --LEKILNGLVKQGLSISSAKATQLSEQLGSELTPRISELLGKLSSGELEPVPL 644
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 21/160 (13%)
Query: 479 LINKGQIDAAYRIVNTLARSANINGEQLPV----GGF--------LVRHMVKTNQPIDKV 526
L+ + ++DAA++++ N ++LP+ G F ++ + + QP +K+
Sbjct: 757 LLQEERVDAAFKVLEE-------NKKELPIAEAEGSFNYVSTVWRILNSLAEAGQP-EKL 808
Query: 527 LAVCHRLTDEN-LHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRF 585
+ L N + P L LIK H++K+D A+E FE ++++TPWK EL R
Sbjct: 809 RKLFDALVGANYIVPTNVLLGPLIKVHLVKDDIPKAIEAFEEICQKYKSTPWKNELACRL 868
Query: 586 IQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLR 625
IQ EDA LQ++TDLST IHGEVNSLYDL+ SF++ +R
Sbjct: 869 IQKEDATNLQKLTDLSTGIHGEVNSLYDLVFSFVECGRVR 908
>gi|13958630|gb|AAK50882.1|AF327844_1 bicoid mRNA stability factor [Drosophila melanogaster]
gi|16186254|gb|AAL14024.1| SD10676p [Drosophila melanogaster]
Length = 1412
Score = 212 bits (539), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 110/228 (48%), Positives = 158/228 (69%), Gaps = 11/228 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+VP++ISHYNALLRVYL+NEH F+PTDFLA++E++GIEPNRVTYQ +LI++YCQ
Sbjct: 134 LNVPMNISHYNALLRVYLENEHGFAPTDFLAEIEAKGIEPNRVTYQ------RLIARYCQ 187
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+IEGAT+ILEFMR K+ P++E VFN+LI GHSQAND+ SA+GIL +M QAGLEPSA T
Sbjct: 188 QGDIEGATRILEFMRAKSLPVNENVFNSLILGHSQANDLESAKGILGVMKQAGLEPSADT 247
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
YT L+C +A+HGD+ ++K + + Q E+ L L +++ ++ + + E + +++
Sbjct: 248 YTTLLCAFARHGDLAAVKETLAECE-QKEIIL-LDKDLLDIVYTLTVN-GNGEHVDDVLT 304
Query: 257 QAGLEPS-AQTYTKLMCGYAKHGDMDSVRRLL-AQSGSSLVNGDYLDI 302
+ L P Q ++ G D +LL SS VNG+ +D+
Sbjct: 305 KLRLSPGFNQDAVNVILRLVNKGHEDVGLKLLRVMPRSSRVNGEPVDV 352
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 165/592 (27%), Positives = 265/592 (44%), Gaps = 117/592 (19%)
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAVS 309
L + G+EP+ TY +L+ Y + GD++ R+L ++ S VN + + + +
Sbjct: 163 LAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSL----IL 218
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
GH + D SA +M QAGLEPSA TYT L+C +A+HGD+ +++ L
Sbjct: 219 GHSQANDLESAKGIL----------GVMKQAGLEPSADTYTTLLCAFARHGDLAAVKETL 268
Query: 370 AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDA 429
A+ EII L++K +D
Sbjct: 269 AECEQK-----------------------EII-------------------LLDKDLLDI 286
Query: 430 AYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAY 489
Y + + N NGE V L + + G++ DA N I L+NKG D
Sbjct: 287 VYTL------TVNGNGEH--VDDVLTKLRLSP-----GFNQDAVNVILRLVNKGHEDVGL 333
Query: 490 RIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLI 549
+++ + RS+ +NGE + VG F +R MVK N+P++K+L++C L E L+P+A +A
Sbjct: 334 KLLRVMPRSSRVNGEPVDVGAFFIRQMVKANRPVEKILSICKSLQSEGLNPKALTIAT-- 391
Query: 550 KAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEVN 609
+ T V +N A P LQ + + I +
Sbjct: 392 -----EAGLTNGV------INN--ALP----------------LLQEMKNAGLPIRQ--H 420
Query: 610 SLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSVG 669
+ L+ S +VL I++ + EF V N+ET+RDYV+P L N + + LR G
Sbjct: 421 YFWPLICSAESNQVLEIVRRMQQEFSVFPNSETVRDYVIPNLKEKNW--ERIVTSLRDAG 478
Query: 670 VTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLVTVV 729
V + ++ V L H + EAA + + RA+Y + + L ++ T D S + V
Sbjct: 479 VPNSTAVTSAVYSALVTHQIAEAAKIMEKNRAYYVPFLFKQPLILALSHTNDYASFIRCV 538
Query: 730 RAVCE--NWEKGEEGEKEEEGEEKTAGQLIDMDRIFAGNVLLDIYKAT---RQDPNVVSH 784
R + E + +G K+EE E+ + +RI V + +AT R+D
Sbjct: 539 RQIHEGLQFRQG----KDEEVEQVEGVAAVPTERITPDVVGAIVQEATTYFRRDRGAT-- 592
Query: 785 LEQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPL 836
LE++L V+ + IS+ + + LGS LT IS+ LG L+S +L P PL
Sbjct: 593 LEKILKGLVKQGLSISSDKATQLSEQLGSELTPKISELLGKLSSGELEPVPL 644
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 93/160 (58%), Gaps = 21/160 (13%)
Query: 479 LINKGQIDAAYRIVNTLARSANINGEQLPV----GGF--------LVRHMVKTNQPIDKV 526
L+ + ++DAA++I+ N +++PV G + ++ + + QP +++
Sbjct: 757 LLQEERVDAAFKILEE-------NKKEVPVAEAEGSYNYMSTVWRILNSLAEAGQP-ERL 808
Query: 527 LAVCHRLTDEN-LHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRF 585
+ L N + P L LIK H++K+D A+E FE ++++TPWK EL R
Sbjct: 809 RKLFDVLVGANYIVPTNVLLGPLIKVHLVKDDIPKAIEAFEEICQKYKSTPWKNELACRL 868
Query: 586 IQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLR 625
IQ EDAA LQ++TDLST IHGEVNSLYDL+ SF++ +R
Sbjct: 869 IQKEDAANLQKLTDLSTGIHGEVNSLYDLVFSFVECGRVR 908
>gi|195484148|ref|XP_002090573.1| GE12730 [Drosophila yakuba]
gi|194176674|gb|EDW90285.1| GE12730 [Drosophila yakuba]
Length = 1412
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 125/152 (82%), Gaps = 7/152 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+VP+DISHYNALLRVYL+NEH F+PTDFLA++E++GIEPNRVTYQ +LI++YCQ
Sbjct: 134 LNVPMDISHYNALLRVYLENEHGFAPTDFLAEIEAKGIEPNRVTYQ------RLIARYCQ 187
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+IEGAT+ILEFMR K+ P++E VFN+LI GHSQAND+ SA+GIL +M QAGLEPSA T
Sbjct: 188 QGDIEGATRILEFMRAKSLPVNENVFNSLILGHSQANDLESAKGILGVMKQAGLEPSADT 247
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
YT L+C +A+HGD+ ++K + + Q E+ L
Sbjct: 248 YTTLLCAFARHGDLAALKETLNECE-QKEIIL 278
Score = 192 bits (489), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 163/593 (27%), Positives = 264/593 (44%), Gaps = 117/593 (19%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAV 308
L + G+EP+ TY +L+ Y + GD++ R+L ++ S VN + + + +
Sbjct: 162 FLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRAKSLPVNENVFNSL----I 217
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
GH + D SA +M QAGLEPSA TYT L+C +A+HGD+ +++
Sbjct: 218 LGHSQANDLESAKGIL----------GVMKQAGLEPSADTYTTLLCAFARHGDLAALKET 267
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQID 428
L + EII L++K +D
Sbjct: 268 LNECEQK-----------------------EII-------------------LLDKDLLD 285
Query: 429 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAA 488
Y + + N NGE V ++ + G++ DA N I L+NKG +
Sbjct: 286 IVYTL------TVNGNGEH-------VDEVLPKLRLSPGFNQDAVNVILRLVNKGHENVG 332
Query: 489 YRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVL 548
+++ + RS+ +NGE + VG F +R MVK N+P++K+L++C L E L+P+A +A
Sbjct: 333 LKLLRVMPRSSRVNGEPVDVGAFFIRQMVKANRPVEKILSICKTLQSEGLNPKALTIAT- 391
Query: 549 IKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEV 608
+ T V VN A P LQ + + I
Sbjct: 392 ------EAGLTNGV------VNN--ALP----------------LLQEMKNAGLPIRQ-- 419
Query: 609 NSLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSV 668
+ + L+ S +VL I++ + EF V N+ET+RDYV+P L N + + LR
Sbjct: 420 HYFWPLICSAESNQVLEIVRRMQQEFSVFPNSETVRDYVIPNLKEKNW--ERIVTSLRDA 477
Query: 669 GVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLVTV 728
GV + ++ V L H + EAA + + RA+Y + + L ++ T D S +
Sbjct: 478 GVPNSTAVTSAVYSALVTHQIAEAAKIMEKNRAYYVPFLFKQPLILALSHTNDYASFIRC 537
Query: 729 VRAVCE--NWEKGEEGEKEEEGEEKTAGQLIDMDRI---FAGNVLLDIYKATRQDPNVVS 783
VR + E + +G KEEE E+ G + +RI G ++ + R+D
Sbjct: 538 VRQIHEGLQFRQG----KEEEVEQAEGGAAVPTERITPDVVGGIVQEATTYFRRDRGAT- 592
Query: 784 HLEQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPL 836
LE++L V+ + IS+ + + LGS LT IS+ LG L+S +L P PL
Sbjct: 593 -LEKILKGLVKQGLSISSAKATQLSEQLGSELTPKISELLGKLSSGELEPVPL 644
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 90/160 (56%), Gaps = 21/160 (13%)
Query: 479 LINKGQIDAAYRIVNTLARSANINGEQLPV----GGF--------LVRHMVKTNQPIDKV 526
L+ + + DAA++++ N + +P+ G F ++ + + QP +K+
Sbjct: 757 LLQEERADAAFKVLEE-------NKKDVPIAEAEGSFNYVSTVWRILNSLAEAGQP-EKL 808
Query: 527 LAVCHRLTDEN-LHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRF 585
+ L N + P L LIK H++K+D A+E FE ++++TPWK EL R
Sbjct: 809 RKLFDALVGANYIVPTNVLLGPLIKVHLVKDDIPKAIEAFEEICQKYKSTPWKNELACRL 868
Query: 586 IQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLR 625
IQ EDA LQ++TDLST IHGEVNSLYDL+ SF++ +R
Sbjct: 869 IQKEDATNLQKLTDLSTGIHGEVNSLYDLVFSFVECGRVR 908
>gi|195147886|ref|XP_002014905.1| GL19424 [Drosophila persimilis]
gi|194106858|gb|EDW28901.1| GL19424 [Drosophila persimilis]
Length = 1410
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 92/138 (66%), Positives = 119/138 (86%), Gaps = 6/138 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+VP+DISHYNALLRVYL+NEH F+PTDFLA++E++GIEPNRVTYQ +LI++YCQ
Sbjct: 134 LNVPMDISHYNALLRVYLENEHPFAPTDFLAEIEAKGIEPNRVTYQ------RLIARYCQ 187
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+IEGAT+ILEFMR K+ P++E VFN+LI GHSQAND+ SA+GIL +M QAGLEPSA T
Sbjct: 188 QGDIEGATRILEFMRGKSLPVNENVFNSLILGHSQANDLESAKGILAVMKQAGLEPSADT 247
Query: 197 YTKLMCGYAKHGDMDSIK 214
YT L+C +A+HGD+ +++
Sbjct: 248 YTTLLCAFARHGDLAALQ 265
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 166/589 (28%), Positives = 266/589 (45%), Gaps = 110/589 (18%)
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-QSGSSL-VNGDYLDIIHALAVS 309
L + G+EP+ TY +L+ Y + GD++ R+L G SL VN + + + +
Sbjct: 163 LAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRGKSLPVNENVFNSL----IL 218
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
GH + D SA +M QAGLEPSA TYT L+C +A+HGD+ +++
Sbjct: 219 GHSQANDLESAKGILA----------VMKQAGLEPSADTYTTLLCAFARHGDLAALQ--- 265
Query: 370 AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDA 429
+L D +II L +K +D
Sbjct: 266 ----ETLTECDQKEII-----------------------------------LQDKDLLDT 286
Query: 430 AYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAY 489
Y TLA +NG V L + + G++ DA N I L+NKG +
Sbjct: 287 VY----TLA----VNGNSEKVDDLLAKLHISP-----GFNQDAVNVILRLVNKGHEEVGL 333
Query: 490 RIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLI 549
+I+ + RS +NGE + VG F +R MVK N+P++K+L +C L E L+P+A ++A
Sbjct: 334 QILRVMPRSNRVNGEPVDVGAFFIRQMVKANRPVEKILTICKTLQAEGLNPKALSIAT-- 391
Query: 550 KAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEVN 609
+ T V VN A P LLK A L H
Sbjct: 392 -----EAGLTNGV------VNN--ALP----LLKEMKNA----------GLPIRQH---- 420
Query: 610 SLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSVG 669
+ L+ S +VL I++ + EF V N+ET+RDYV+P L N V + LR G
Sbjct: 421 YFWPLICSVESNQVLDIVRRMQQEFAVLPNSETIRDYVIPSLKEKNW--ERVITALRDAG 478
Query: 670 VTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLVTVV 729
V+ + ++ V L H + +AA + + RAHY ++ R L ++ T D S + V
Sbjct: 479 VSNSTAVTSAVYAALVTHQIADAAKIMEQNRAHYVPMLFRQPLILALSHTNDYASFIRCV 538
Query: 730 RAVCENWEKGEEGEKEEEGEEKTAGQLIDMDRI--FAGNVLLDIYKATRQDPNVVSHLEQ 787
R + E ++ G++EE + + A + + + G ++ + +D V+ LE+
Sbjct: 539 RQIHEGLQQRSAGKEEEAEQGEAAAAATEKNSVTDVVGGIVQEASNYFHRDR--VATLEK 596
Query: 788 LLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPL 836
+L V+ + IS+ + + + LG+ +T IS+ LG L+S +L P PL
Sbjct: 597 ILLGLVKQGLSISSAKATQLSDQLGAEMTPKISELLGKLSSGELEPTPL 645
Score = 99.4 bits (246), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 61/93 (65%)
Query: 533 LTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAA 592
L D + P L LIK H++K+D A+ETFE ++ TPWK EL R IQ EDA
Sbjct: 817 LADNYIVPTNVLLGPLIKVHLVKDDIPKAIETFEGICKTYKVTPWKNELSCRLIQKEDAV 876
Query: 593 CLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLR 625
LQR+TDLST IHGEVNSLYDL+ SF++ +R
Sbjct: 877 NLQRLTDLSTGIHGEVNSLYDLVFSFVECGRVR 909
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 97/171 (56%), Gaps = 9/171 (5%)
Query: 156 PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT 215
P+ +NAL+ + + + L + G+EP+ TY +L+ Y + GD++
Sbjct: 137 PMDISHYNALLRVYLENEHPFAPTDFLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATR 196
Query: 216 KIPSLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
+ ++ +S L + + N LIL ++D+ SA+GIL +M QAGLEPSA TYT L+C
Sbjct: 197 ILEFMRGKS---LPVNENVFNSLILGHSQANDLESAKGILAVMKQAGLEPSADTYTTLLC 253
Query: 273 GYAKHGDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEVSA 320
+A+HGD+ +++ L + L + D LD ++ LAV+G+ E +D++ A
Sbjct: 254 AFARHGDLAALQETLTECDQKEIILQDKDLLDTVYTLAVNGNSEKVDDLLA 304
>gi|198474332|ref|XP_001356649.2| GA10231 [Drosophila pseudoobscura pseudoobscura]
gi|198138345|gb|EAL33714.2| GA10231 [Drosophila pseudoobscura pseudoobscura]
Length = 1410
Score = 210 bits (535), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 92/138 (66%), Positives = 119/138 (86%), Gaps = 6/138 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+VP+DISHYNALLRVYL+NEH F+PTDFLA++E++GIEPNRVTYQ +LI++YCQ
Sbjct: 134 LNVPMDISHYNALLRVYLENEHPFAPTDFLAEIEAKGIEPNRVTYQ------RLIARYCQ 187
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+IEGAT+ILEFMR K+ P++E VFN+LI GHSQAND+ SA+GIL +M QAGLEPSA T
Sbjct: 188 QGDIEGATRILEFMRGKSLPVNENVFNSLILGHSQANDLESAKGILAVMKQAGLEPSADT 247
Query: 197 YTKLMCGYAKHGDMDSIK 214
YT L+C +A+HGD+ +++
Sbjct: 248 YTTLLCAFARHGDLAALQ 265
Score = 185 bits (470), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 166/589 (28%), Positives = 266/589 (45%), Gaps = 110/589 (18%)
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-QSGSSL-VNGDYLDIIHALAVS 309
L + G+EP+ TY +L+ Y + GD++ R+L G SL VN + + + +
Sbjct: 163 LAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRGKSLPVNENVFNSL----IL 218
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
GH + D SA +M QAGLEPSA TYT L+C +A+HGD+ +++
Sbjct: 219 GHSQANDLESAKGILA----------VMKQAGLEPSADTYTTLLCAFARHGDLAALQ--- 265
Query: 370 AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDA 429
+L D +II L +K +D
Sbjct: 266 ----ETLTECDQKEII-----------------------------------LQDKDLLDT 286
Query: 430 AYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAY 489
Y TLA +NG V L + + G++ DA N I L+NKG +
Sbjct: 287 VY----TLA----VNGNTDKVDDLLAKLHISP-----GFNQDAVNVILRLVNKGHEEVGL 333
Query: 490 RIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLI 549
+I+ + RS +NGE + VG F +R MVK N+P++K+L +C L E L+P+A ++A
Sbjct: 334 QILRVMPRSNRVNGEPVDVGAFFIRQMVKANRPVEKILTICKTLQAEGLNPKALSIAT-- 391
Query: 550 KAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEVN 609
+ T V VN A P LLK A L H
Sbjct: 392 -----EAGLTNGV------VNN--ALP----LLKEMKNA----------GLPIRQH---- 420
Query: 610 SLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSVG 669
+ L+ S +VL I++ + EF V N+ET+RDYV+P L N V + LR G
Sbjct: 421 YFWPLICSVESNQVLDIVRRMQQEFAVLPNSETIRDYVIPSLKEKNW--ERVITALRDAG 478
Query: 670 VTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLVTVV 729
V+ + ++ V L H + +AA + + RAHY ++ R L ++ T D S + V
Sbjct: 479 VSNSTAVTSAVYAALVTHQIADAAKIMEQNRAHYVPMLFRQPLILALSHTNDYASFIRCV 538
Query: 730 RAVCENWEKGEEGEKEEEGEEKTAGQLIDMDRI--FAGNVLLDIYKATRQDPNVVSHLEQ 787
R + E ++ G++EE + + A + + + G ++ + +D V+ LE+
Sbjct: 539 RQIHEGLQQRSAGKEEEAEQGEAAAAATEKNSVPDVVGGIVQEASNYFHRD--RVATLEK 596
Query: 788 LLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPL 836
+L V+ + IS+ + + + LG+ +T IS+ LG L+S +L P PL
Sbjct: 597 ILLGLVKQGLSISSAKATQLSDQLGAEMTPKISELLGKLSSGELEPTPL 645
Score = 99.4 bits (246), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 61/93 (65%)
Query: 533 LTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAA 592
L D + P L LIK H++K+D A+ETFE ++ TPWK EL R IQ EDA
Sbjct: 817 LADNYIVPTNVLLGPLIKVHLVKDDIPKAIETFEGICKTYKVTPWKNELSCRLIQKEDAV 876
Query: 593 CLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLR 625
LQR+TDLST IHGEVNSLYDL+ SF++ +R
Sbjct: 877 NLQRLTDLSTGIHGEVNSLYDLVFSFVECGRVR 909
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 97/171 (56%), Gaps = 9/171 (5%)
Query: 156 PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT 215
P+ +NAL+ + + + L + G+EP+ TY +L+ Y + GD++
Sbjct: 137 PMDISHYNALLRVYLENEHPFAPTDFLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATR 196
Query: 216 KIPSLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
+ ++ +S L + + N LIL ++D+ SA+GIL +M QAGLEPSA TYT L+C
Sbjct: 197 ILEFMRGKS---LPVNENVFNSLILGHSQANDLESAKGILAVMKQAGLEPSADTYTTLLC 253
Query: 273 GYAKHGDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEVSA 320
+A+HGD+ +++ L + L + D LD ++ LAV+G+ + +D++ A
Sbjct: 254 AFARHGDLAALQETLTECDQKEIILQDKDLLDTVYTLAVNGNTDKVDDLLA 304
>gi|195435271|ref|XP_002065625.1| GK14571 [Drosophila willistoni]
gi|194161710|gb|EDW76611.1| GK14571 [Drosophila willistoni]
Length = 1414
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 92/137 (67%), Positives = 118/137 (86%), Gaps = 6/137 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+VP+DISHYNALLRVYL+NEH F+PTDFLA++E++GIEPNRVTYQ +LI++YCQ
Sbjct: 134 LNVPMDISHYNALLRVYLENEHQFAPTDFLAEIEAKGIEPNRVTYQ------RLIARYCQ 187
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+IEGAT+ILEFMR K+ P++E VFN+LI GHSQAND+ SA+GIL +M QAGLEPSA T
Sbjct: 188 QGDIEGATRILEFMRGKSLPVNENVFNSLILGHSQANDLESAKGILGVMKQAGLEPSADT 247
Query: 197 YTKLMCGYAKHGDMDSI 213
YT L+C +A+HGD+ ++
Sbjct: 248 YTTLLCAFARHGDLAAL 264
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 158/598 (26%), Positives = 262/598 (43%), Gaps = 121/598 (20%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-QSGSSL-VNGDYLDIIHALAV 308
L + G+EP+ TY +L+ Y + GD++ R+L G SL VN + + + +
Sbjct: 162 FLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATRILEFMRGKSLPVNENVFNSL----I 217
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
GH + D SA +M QAGLEPSA TYT L+C +A+HGD
Sbjct: 218 LGHSQANDLESAKGIL----------GVMKQAGLEPSADTYTTLLCAFARHGD------- 260
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQID 428
LA +L + +II L++K +D
Sbjct: 261 LAALHETLAECEQKEII-----------------------------------LLDKDLLD 285
Query: 429 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAA 488
Y + + + NGE+ ++ + G++ DA N I L+NKG D A
Sbjct: 286 IVYTL------TIHGNGEK-------SDEVLSKLRISPGFNQDAVNIILRLVNKGFEDVA 332
Query: 489 YRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVL 548
+++ + R+ +NGEQ+ VG F VR +VK N+P++K+L++C L E L+P+A +A
Sbjct: 333 LKLLRLMPRTTRVNGEQVDVGAFFVRQLVKANRPVEKILSICRTLQAEGLNPKALTIAT- 391
Query: 549 IKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEV 608
+ T V VN A P LQ + + I
Sbjct: 392 ------EAGLTNGV------VNN--ALP----------------LLQEMKNAGLPIRQ-- 419
Query: 609 NSLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSV 668
+ + L S +VL I++ + EF + N+ET+RDYV+P L N + + LR
Sbjct: 420 HYFWPLFCSVESNQVLDIVRRMQQEFSLYPNSETIRDYVIPNLKEKNW--DRIVTSLRDA 477
Query: 669 GVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLVTV 728
GV + ++ V L H L +AA + + RA+Y ++ R L ++ T+D S +
Sbjct: 478 GVPNSTAVTSAVYSALVTHQLADAAKIMEQSRAYYVPILFRQPLILALSHTKDYASFIRC 537
Query: 729 VRAVCE-------NWEKGEEGEKEEEGEEKTAGQLIDMDRIFAGNVLLDI---YKATRQD 778
VR + E N + E+++ + A + G+++ + +K R
Sbjct: 538 VRQIHEGLQLRANNKSEAATAEEDQVASDGEAPTTTSVANDVVGSIVHEAAIYFKRER-- 595
Query: 779 PNVVSHLEQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPL 836
V LE++L V+ + IS+ + + +GS +T +S+ LG L+S +L P PL
Sbjct: 596 ---VPILEKILEGLVKQGLSISSGKATVLSELIGSEMTPKVSELLGKLSSGELEPTPL 650
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 96/169 (56%), Gaps = 9/169 (5%)
Query: 156 PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT 215
P+ +NAL+ + + + L + G+EP+ TY +L+ Y + GD++
Sbjct: 137 PMDISHYNALLRVYLENEHQFAPTDFLAEIEAKGIEPNRVTYQRLIARYCQQGDIEGATR 196
Query: 216 KIPSLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
+ ++ +S L + + N LIL ++D+ SA+GIL +M QAGLEPSA TYT L+C
Sbjct: 197 ILEFMRGKS---LPVNENVFNSLILGHSQANDLESAKGILGVMKQAGLEPSADTYTTLLC 253
Query: 273 GYAKHGDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
+A+HGD+ ++ LA+ L++ D LDI++ L + G+GE DEV
Sbjct: 254 AFARHGDLAALHETLAECEQKEIILLDKDLLDIVYTLTIHGNGEKSDEV 302
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 89/156 (57%), Gaps = 13/156 (8%)
Query: 479 LINKGQIDAAYRIVNTLARSANINGEQLPVGGF--------LVRHMVKTNQPIDKVLAVC 530
L+ + +++ A++++ + A N + G F ++ + + QP +K+ +
Sbjct: 763 LLQEERVEEAFKVLEENKKDAVFNESE---GSFNYVSTVWRVLNALAEAGQP-EKLKRLF 818
Query: 531 HRLTDEN-LHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAE 589
L N + P L LIK H+ K+D A++TFE ++++TPWK EL R IQ E
Sbjct: 819 DALVSHNYIVPTNVLLGPLIKVHLAKDDIPKAIDTFEEICQKYKSTPWKNELACRLIQKE 878
Query: 590 DAACLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLR 625
DA LQR+TDLST IHGEVNSLYDL+ SF++ +R
Sbjct: 879 DATNLQRLTDLSTGIHGEVNSLYDLVFSFVECGRVR 914
>gi|194758723|ref|XP_001961611.1| GF14846 [Drosophila ananassae]
gi|190615308|gb|EDV30832.1| GF14846 [Drosophila ananassae]
Length = 1412
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 154/228 (67%), Gaps = 11/228 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+VP+DISHYNALLRVYL+NEH F+PT+FLA++E++GIEPNRVTYQ +LI++YCQ
Sbjct: 134 LNVPMDISHYNALLRVYLENEHGFAPTEFLAEIEAKGIEPNRVTYQ------RLIARYCQ 187
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+I+GAT+ILEFMR K+ P++E VFN+LI GHSQAND+ SA+GIL +M QAGLEPSA T
Sbjct: 188 LGDIDGATRILEFMRAKSLPVNENVFNSLILGHSQANDLESAKGILGVMKQAGLEPSADT 247
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
YT L+C +A+HGD+ +IK + Q E+ L L +I + + E + +++
Sbjct: 248 YTTLLCAFARHGDLAAIKETLAECD-QKEIILLDKDLLD--IIYTLTIHGNGESVDELLT 304
Query: 257 QAGLEPS-AQTYTKLMCGYAKHGDMDSVRRLL-AQSGSSLVNGDYLDI 302
+ + P Q ++ G D +LL S+ VNG+ +D+
Sbjct: 305 KLRISPGFNQDAVNVILRLVNKGQEDVGLKLLRVMPRSNRVNGEPIDV 352
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 169/593 (28%), Positives = 267/593 (45%), Gaps = 115/593 (19%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAV 308
L + G+EP+ TY +L+ Y + GD+D R+L ++ S VN + + + +
Sbjct: 162 FLAEIEAKGIEPNRVTYQRLIARYCQLGDIDGATRILEFMRAKSLPVNENVFNSL----I 217
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
GH + D SA +M QAGLEPSA TYT L+C +A+HGD+ +I+
Sbjct: 218 LGHSQANDLESAKGIL----------GVMKQAGLEPSADTYTTLLCAFARHGDLAAIKET 267
Query: 369 LA---QNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
LA Q L++ D LDII+ L + HG G S D L+ K
Sbjct: 268 LAECDQKEIILLDKDLLDIIYTLTI--HGN-------------GESVD------ELLTKL 306
Query: 426 QIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQI 485
+I G++ DA N I L+NKGQ
Sbjct: 307 RISP-------------------------------------GFNQDAVNVILRLVNKGQE 329
Query: 486 DAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNL 545
D +++ + RS +NGE + VG F +R MVK N+P++K+L++C L E L+P+A +
Sbjct: 330 DVGLKLLRVMPRSNRVNGEPIDVGAFFIRQMVKANRPVEKILSICKALQAEGLNPKALTI 389
Query: 546 AVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIH 605
A +A + GA+ A P LQ + I
Sbjct: 390 AT--EAGL----TNGAINN---------ALP----------------LLQEMKSAGLPIR 418
Query: 606 GEVNSLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQL 665
+ + L+ S +VL I++ + EF V N+ET+R+YV+P L N V + L
Sbjct: 419 Q--HYFWPLICSVESNQVLDIVRRMQQEFSVFPNSETIREYVIPNLKEKNW--ERVVTAL 474
Query: 666 RSVGVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSL 725
R GV + ++ V L HN+ EAA + + RA+Y + R L ++ T D S
Sbjct: 475 RDAGVPNSTAVTSAVYAALATHNISEAAKIMEQNRAYYLPFLFRQPLILALSHTNDYSSF 534
Query: 726 VTVVRAVCENWEKGEEGEKEEEGEEKTAGQLIDMDRIFAGNVLLDIYK--ATRQDPNVVS 783
+ VR + E + +G++EE E+ A + + +V+ I + AT V+
Sbjct: 535 IRCVRQIHEGLQL-RQGKEEEAEAEQGAEAVAAVSEKATPDVVGSIVQEAATYFRRERVA 593
Query: 784 HLEQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPL 836
LE++L V+ + IS+ + + LG LT +S+ LG L+S +L+P PL
Sbjct: 594 TLEKILKGLVKQGLSISSQKATLVSEQLGGELTPRVSELLGKLSSGELVPVPL 646
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 60/81 (74%)
Query: 545 LAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSI 604
L LIK H++K+D A++TFE + ++TPWK EL R IQ EDAA LQ++TDLST+I
Sbjct: 830 LGPLIKVHLVKDDVQKAIQTFEEICQKHKSTPWKNELACRLIQKEDAANLQKLTDLSTAI 889
Query: 605 HGEVNSLYDLMLSFLDAEVLR 625
HGEVNSLYDL+ SF++ +R
Sbjct: 890 HGEVNSLYDLVFSFVECGRVR 910
>gi|312382269|gb|EFR27785.1| hypothetical protein AND_05111 [Anopheles darlingi]
Length = 1875
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/148 (66%), Positives = 121/148 (81%), Gaps = 7/148 (4%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
+D+SHYNALLRVYLDNEH+FSPT+FLA L+S GIEPNRVTYQ +LIS+YCQ G+I
Sbjct: 1 MDVSHYNALLRVYLDNEHSFSPTEFLADLQSNGIEPNRVTYQ------RLISRYCQQGDI 54
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
EGATKILEFMR+K P++E VFNALI GHSQA+D+ SA GIL +M+QAGL+PSA TYT L
Sbjct: 55 EGATKILEFMREKQLPVNEYVFNALIMGHSQADDLESATGILAVMAQAGLQPSADTYTTL 114
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFL 228
+CGYA+ GD++ I I S + Q E+FL
Sbjct: 115 LCGYARKGDIEYILKTIDSCE-QKEVFL 141
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 163/596 (27%), Positives = 263/596 (44%), Gaps = 134/596 (22%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-QSGSSLVNGDYLDIIHALAVS 309
L + G+EP+ TY +L+ Y + GD++ ++L L +Y + +AL +
Sbjct: 25 FLADLQSNGIEPNRVTYQRLISRYCQQGDIEGATKILEFMREKQLPVNEY--VFNAL-IM 81
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
GH + D SA +M+QAGL+PSA TYT L+CGYA+ GD++ I + +
Sbjct: 82 GHSQADDLESATGILA----------VMAQAGLQPSADTYTTLLCGYARKGDIEYILKTI 131
Query: 370 ---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQ 426
Q L++ D L+I++ LA + G
Sbjct: 132 DSCEQKEVFLLDKDILEIVYTLATN---------------------------------GH 158
Query: 427 IDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQID 486
+ A ++ + R A GY+ DA N I LINKGQ +
Sbjct: 159 AEKADPLLERIRRQA-------------------------GYNQDAVNVILRLINKGQEE 193
Query: 487 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLA 546
A NT GGFLVR +V+ +P +K++A+C L + ++ RAF +A
Sbjct: 194 LA----NT--------------GGFLVRQLVRAQRPAEKLIAICRELQESGMNDRAFLVA 235
Query: 547 VLIKAHVLKEDYTGAVETFEYCVNQF--RATPWKGELLKRFIQAEDAACLQRITDLSTSI 604
+ LK G+VET + + + P + + C R +S
Sbjct: 236 L---ETALK---AGSVETSFALLKELATQQQPIRQHFFWPLM------CGNR-AKMSQEA 282
Query: 605 HGEVNSLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQ 664
E VL +L+ EF + ++ET+RDY +P + N E+ Q
Sbjct: 283 RTE--------------NVLLVLRTMMEEFSIHPSSETIRDYAIPNMPVTN---SEIAIQ 325
Query: 665 L-RSVGVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLP 723
L RSVG++ +S+ H L ++NLKEAA +A +RA+Y+ V R L + ++++D
Sbjct: 326 LLRSVGISSAVASSSCAHHALERNNLKEAANIAGRYRAYYSPGVFRKPLVQALVQSRDYD 385
Query: 724 SLVTVVRAVCENWEKGEEGEKEE-----EGEEKTAGQLID-MDRIFAGNVLLDIYKATRQ 777
S + R++ + ++ E E EG + ++G+ D + G +L D+ +
Sbjct: 386 SYIRFSRSLYDGLKRSRPSEDETAEGAVEGADTSSGRNADTVQGETLGCMLFDVVTTFKT 445
Query: 778 DPNVVSHLEQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMP 833
D V LE+LL FV + IS ++ IQ LG+ LTS+IS L L + DL P
Sbjct: 446 DR--VEVLERLLTGFVNQGLSISGELAERIQERLGAELTSEISSMLSKLAAGDLQP 499
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 79/139 (56%), Gaps = 21/139 (15%)
Query: 487 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLA 546
A +R++N LA N+ EQ VGG H + + P+ L
Sbjct: 674 ACWRLLNILAEKGNV--EQ--VGGLF-----------------DHLIAQRYIKPQNIFLG 712
Query: 547 VLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHG 606
LIK H++K+D A+ FE ++RATPWK EL R IQAEDAA LQR+TDLST +HG
Sbjct: 713 SLIKVHLVKDDLPSAMTAFEQICQRYRATPWKTELTCRLIQAEDAANLQRLTDLSTEVHG 772
Query: 607 EVNSLYDLMLSFLDAEVLR 625
EVNSLYDL+ +F+D +R
Sbjct: 773 EVNSLYDLVFAFVDCGRIR 791
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 9/161 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + S L + G+EP+ TY +L+ Y + GD++ TKI L+
Sbjct: 6 YNALLRVYLDNEHSFSPTEFLADLQSNGIEPNRVTYQRLISRYCQQGDIEGA-TKI--LE 62
Query: 222 PQSELFLCFSFQLTNLLILVSS---DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
E L + + N LI+ S D+ SA GIL +M+QAGL+PSA TYT L+CGYA+ G
Sbjct: 63 FMREKQLPVNEYVFNALIMGHSQADDLESATGILAVMAQAGLQPSADTYTTLLCGYARKG 122
Query: 279 DMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYID 316
D++ + + + Q L++ D L+I++ LA +GH E D
Sbjct: 123 DIEYILKTIDSCEQKEVFLLDKDILEIVYTLATNGHAEKAD 163
>gi|91080713|ref|XP_975329.1| PREDICTED: similar to bicoid stability factor CG10302-PA [Tribolium
castaneum]
gi|270005471|gb|EFA01919.1| hypothetical protein TcasGA2_TC007529 [Tribolium castaneum]
Length = 1339
Score = 207 bits (528), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 169/598 (28%), Positives = 279/598 (46%), Gaps = 120/598 (20%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAV 308
L + G+EP+ TY +L+ Y + GD++ ++L + VN + + +AL V
Sbjct: 161 FLADLESKGIEPNRVTYQRLIARYCQVGDIEGATKILEFMKEKQLPVNEN---VFNALIV 217
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
GH + D SA + G +M+QAGLEPSA TYT L+CG+ K GD+D+I +L
Sbjct: 218 -GHSQTGDMDSA---------QGILG-VMTQAGLEPSADTYTTLLCGFGKKGDIDAINKL 266
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQID 428
+ S + +L++K +D
Sbjct: 267 FEECESKEI------------------------------------------YLLDKDYLD 284
Query: 429 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAA 488
Y A + N + E +P ++ + +GY+ DA N I LINKG DAA
Sbjct: 285 IVY------ALATNGHSEHIP-------QILSKVRRAIGYNQDAINLILRLINKGLEDAA 331
Query: 489 YRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVL 548
+ ++ T+ RS N +G PVG F V+ MVK N+P++K++ +C++L ++ R +LA
Sbjct: 332 FPVLETVVRSTNPDGTHNPVGNFFVKQMVKANRPVEKIIEMCNKLESSGMYTRGLSLA-- 389
Query: 549 IKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEV 608
A + E+ +Q A EL K+ I I S G+
Sbjct: 390 ------------AETSLEFGNDQL-AYSLLTELSKKDIPVRQHYFWPLIVAKSKDSSGQ- 435
Query: 609 NSLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSV 668
+ D++LS +F + + ETLR+YV+P L P S E+ S LRS
Sbjct: 436 -GILDVLLSM-------------HKFNITPSNETLREYVIPNLKAP---SSEILSILRSA 478
Query: 669 GVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLVTV 728
V +G+ + V H+L + ++KEAA+++ A Y +++ L S+ + +DL S + +
Sbjct: 479 NVPLGTSGACLVHHLLNKSDIKEAAIISTQVSAFYNPDLLKRPLTNSFYKNKDLESYIRI 538
Query: 729 VRAVCENWEKGEEGEKEEEGEEKTAGQLIDMDRIFAGNVLLDIYKATRQDPNVVSHLEQL 788
VR + +N ++ + E++E Q+ D + + GN++LD+ R+ NVV E +
Sbjct: 539 VRNIYDNLDRLKRSEEDE------PTQVADKNEV-VGNLVLDL-SWNREFLNVV---EDV 587
Query: 789 LNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPL-----QYVPS 841
L + + IS +++ +Q LG +T +IS LG LTS L P P+ Y PS
Sbjct: 588 LKGLISEGLSISTTAAEKLQEKLGEKMTEEISSLLGKLTSGHLTPVPVPKKLPSYTPS 645
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/139 (68%), Positives = 116/139 (83%), Gaps = 6/139 (4%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
+L+VP+DISHYNALLRVYL+NEH FSP +FLA LES+GIEPNRVTYQ +LI++Y
Sbjct: 131 NKLNVPMDISHYNALLRVYLENEHQFSPAEFLADLESKGIEPNRVTYQ------RLIARY 184
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
CQ G+IEGATKILEFM++K P++E VFNALI GHSQ DM SA+GIL +M+QAGLEPSA
Sbjct: 185 CQVGDIEGATKILEFMKEKQLPVNENVFNALIVGHSQTGDMDSAQGILGVMTQAGLEPSA 244
Query: 195 QTYTKLMCGYAKHGDMDSI 213
TYT L+CG+ K GD+D+I
Sbjct: 245 DTYTTLLCGFGKKGDIDAI 263
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 103/173 (59%), Gaps = 9/173 (5%)
Query: 156 PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT 215
P+ +NAL+ + + S L + G+EP+ TY +L+ Y + GD++ T
Sbjct: 136 PMDISHYNALLRVYLENEHQFSPAEFLADLESKGIEPNRVTYQRLIARYCQVGDIEG-AT 194
Query: 216 KIPSLKPQSELFLCFSFQLTNLLILVSS---DMASAEGILTMMSQAGLEPSAQTYTKLMC 272
KI L+ E L + + N LI+ S DM SA+GIL +M+QAGLEPSA TYT L+C
Sbjct: 195 KI--LEFMKEKQLPVNENVFNALIVGHSQTGDMDSAQGILGVMTQAGLEPSADTYTTLLC 252
Query: 273 GYAKHGDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
G+ K GD+D++ +L + S L++ DYLDI++ALA +GH E+I ++ + V
Sbjct: 253 GFGKKGDIDAINKLFEECESKEIYLLDKDYLDIVYALATNGHSEHIPQILSKV 305
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 62/81 (76%)
Query: 545 LAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSI 604
L L+K H++ +D A+E FE+CVNQFRATPWK EL + IQ EDA LQ++TDLSTSI
Sbjct: 820 LGPLVKVHLVNKDIDKAMEKFEWCVNQFRATPWKNELACQLIQKEDAEKLQKLTDLSTSI 879
Query: 605 HGEVNSLYDLMLSFLDAEVLR 625
HGE+NSLYDL+ +F++ +R
Sbjct: 880 HGEINSLYDLVFAFVECGRVR 900
>gi|157116375|ref|XP_001658446.1| leucine rich protein, putative [Aedes aegypti]
gi|108876497|gb|EAT40722.1| AAEL007565-PA [Aedes aegypti]
Length = 1382
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 125/152 (82%), Gaps = 7/152 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+V +D+SH+NALLRVYLDNEH FSPT+FLA L+++GIEPNRVTYQ +LIS+YCQ
Sbjct: 132 LNVAMDVSHFNALLRVYLDNEHPFSPTEFLADLKAKGIEPNRVTYQ------RLISRYCQ 185
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+G+IEGATKILE+MR+K P++E VFNALI GHSQA+D+ SA GIL +MSQAGL+PSA T
Sbjct: 186 EGDIEGATKILEYMREKQLPVNEYVFNALIMGHSQADDLESATGILAVMSQAGLQPSADT 245
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
YT L+CGYA+ GD++ I + + + Q E++L
Sbjct: 246 YTTLLCGYARKGDVEYILKTLDTCE-QREIYL 276
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 159/593 (26%), Positives = 261/593 (44%), Gaps = 121/593 (20%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-QSGSSLVNGDYLDIIHALAVS 309
L + G+EP+ TY +L+ Y + GD++ ++L L +Y + +AL +
Sbjct: 160 FLADLKAKGIEPNRVTYQRLISRYCQEGDIEGATKILEYMREKQLPVNEY--VFNAL-IM 216
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
GH + D SA +MSQAGL+PSA TYT L+CGYA+ GD++ I + L
Sbjct: 217 GHSQADDLESATGILA----------VMSQAGLQPSADTYTTLLCGYARKGDVEYILKTL 266
Query: 370 ---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQ 426
Q L++ D L+II Y L G
Sbjct: 267 DTCEQREIYLLDKDLLEII---------------------------------YSLATNGH 293
Query: 427 IDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQID 486
+ ++ + + A GY+ DA N I LIN+GQ D
Sbjct: 294 AEKVDPLIAKIRKQA-------------------------GYNQDAVNVILRLINRGQED 328
Query: 487 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLA 546
AA++++ T+ R+ +GE GGFL++ +VK +P+ K+L++C LT ++ A
Sbjct: 329 AAFKVLKTMPRATKNDGELANTGGFLIKQLVKAKRPVGKILSICEELTSSGMNSNA---- 384
Query: 547 VLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHG 606
Y A+ET LK I A L+ + + + I
Sbjct: 385 -----------YLIALET----------------ALKNGIVDSSYALLKTLNEQNHPIRQ 417
Query: 607 EVNSLYDLMLSFLDAE---VLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFS 663
+ L+ + VL +L+ EF + ++ET+R+Y +P + N EV
Sbjct: 418 HY--FWPLLCANDQPRPEGVLNVLKTMIQEFEMQPSSETIREYAIPNMGMNNH--EEVIQ 473
Query: 664 QLRSVGVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLP 723
LRSVG++ +S V L +NLK+AA +A ++A Y+ V R L + L+TQD
Sbjct: 474 LLRSVGISSAVASSGCVYVALENNNLKDAANIASRYKAFYSPGVYRKPLISALLQTQDFN 533
Query: 724 SLVTVVRAVCENWEKGEEGEKEEEGEEKTAGQLIDMDRIFAGNVLLDI---YKATRQDPN 780
S + R + +N + + E+ E E+ ++ G+++ D+ +K R
Sbjct: 534 SYIRFSRQMYDNLLRMKTKEEMNEQAEENENNSSNVQAEVLGSLIYDVVVSFKNKR---- 589
Query: 781 VVSHLEQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMP 833
V LE++L FV + IS ++ IQ+ LG+ +T++IS L L + DL P
Sbjct: 590 -VEALEKVLTGFVNQGLSISNSQAERIQDKLGAEMTTEISSMLSKLAAGDLEP 641
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%)
Query: 540 PRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITD 599
P+ L LIK H++K D A+ FE ++R TPWK EL R IQ+EDA LQR+TD
Sbjct: 826 PQNIFLGALIKVHIVKNDLQTAIAVFEEICQKYRTTPWKTELTCRLIQSEDATNLQRLTD 885
Query: 600 LSTSIHGEVNSLYDLMLSFLDAEVLR 625
LST +HGEVNSLYDL+ +F+D +R
Sbjct: 886 LSTEVHGEVNSLYDLVFAFVDCGRIR 911
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 96/167 (57%), Gaps = 9/167 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
FNAL+ + S L + G+EP+ TY +L+ Y + GD++ TKI L+
Sbjct: 141 FNALLRVYLDNEHPFSPTEFLADLKAKGIEPNRVTYQRLISRYCQEGDIEGA-TKI--LE 197
Query: 222 PQSELFLCFSFQLTNLLILVSS---DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
E L + + N LI+ S D+ SA GIL +MSQAGL+PSA TYT L+CGYA+ G
Sbjct: 198 YMREKQLPVNEYVFNALIMGHSQADDLESATGILAVMSQAGLQPSADTYTTLLCGYARKG 257
Query: 279 DMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
D++ + + L Q L++ D L+II++LA +GH E +D + A +
Sbjct: 258 DVEYILKTLDTCEQREIYLLDKDLLEIIYSLATNGHAEKVDPLIAKI 304
>gi|170036807|ref|XP_001846253.1| bicoid stability factor [Culex quinquefasciatus]
gi|167879696|gb|EDS43079.1| bicoid stability factor [Culex quinquefasciatus]
Length = 1394
Score = 204 bits (518), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 123/152 (80%), Gaps = 7/152 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L+V +DISHYNALLRVYLDNEH FSPT+FLA L+S+G+EPNRVTYQ +LIS+YCQ
Sbjct: 133 LNVAMDISHYNALLRVYLDNEHAFSPTEFLADLKSKGVEPNRVTYQ------RLISRYCQ 186
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+G+IEGATKILE+MR+K P++E VFNALI GHSQA+D+ SA GIL +M+QAGL+PSA T
Sbjct: 187 EGDIEGATKILEYMREKQLPVNEYVFNALIMGHSQADDLESATGILAVMAQAGLQPSADT 246
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
YT L+ GY + GD++ I + S + Q E++L
Sbjct: 247 YTTLLSGYGRKGDIEYITKTLESCE-QKEVYL 277
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 151/304 (49%), Gaps = 37/304 (12%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-QSGSSLVNGDYLDIIHALAVS 309
L + G+EP+ TY +L+ Y + GD++ ++L L +Y + +AL +
Sbjct: 161 FLADLKSKGVEPNRVTYQRLISRYCQEGDIEGATKILEYMREKQLPVNEY--VFNAL-IM 217
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
GH + D SA +M+QAGL+PSA TYT L+ GY + GD++ I + L
Sbjct: 218 GHSQADDLESATGILA----------VMAQAGLQPSADTYTTLLSGYGRKGDIEYITKTL 267
Query: 370 A---QNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQ 426
Q L++ D L+II++LAV+G+ + +D +I KI+ GY+ DA N I LIN+GQ
Sbjct: 268 ESCEQKEVYLLDKDLLEIIYSLAVNGNADKVDPLIGKIRKQAGYNQDAVNVILRLINRGQ 327
Query: 427 IDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGY--------SADAANHIYH 478
+ A +++ T+ R+ +GE GGFLV+ +VK +P S+ +H Y
Sbjct: 328 EEVAMKLLETMPRATRNDGELANTGGFLVKQLVKARRPAEKVMEICEKLQSSGMNHHAYL 387
Query: 479 L-----INKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMV-KTNQPIDKVLAVCHR 532
L + G + AY ++ L NG+ PV ++ Q + VL V
Sbjct: 388 LALETALKNGITELAYPLLKAL------NGQNQPVRQHYFWPLICAAEQRPEGVLKVLRT 441
Query: 533 LTDE 536
+ DE
Sbjct: 442 MADE 445
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 144/322 (44%), Gaps = 71/322 (22%)
Query: 336 MMSQAG---LEPS--AQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL--DIIHAL 388
M+SQ LEP QT T M + + RL+ + N + L +I +
Sbjct: 631 MLSQLATGELEPVQLEQTATPRMRSNNSSLSIPQLERLVNDTQARGENSNALKNQLIRSA 690
Query: 389 AVSGHGEYIDEIISK-------IQPGVGYSADAANHIYHLINKGQIDAAYRIVN------ 435
S ++EI+S+ +QPGV A I N G+++ A+ +++
Sbjct: 691 IRSNDVAKVEEILSRLEGENYVVQPGV-----YAQIIEMYANAGKVEEAFALLSRVKAKL 745
Query: 436 -----------TLARSANINGEQLP-VGGFLVRHMVKTNQPGVGYSADAANHIYHLINKG 483
LA+S +N E+ + FL +H +P V A + ++
Sbjct: 746 PDFELDSTKVIKLAQSL-LNQERFDDMLKFLSQH-----KPAVVRDAKEQDFTFN----- 794
Query: 484 QIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAF 543
A +R++NTLA +N + NQ H L + + P
Sbjct: 795 --SACWRLLNTLAEQGKVN---------------EVNQ------LFTHLLDNGYITPHNI 831
Query: 544 NLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTS 603
L LIK H+ ++D A+ FE ++R TPWK EL R IQAEDAA LQRITDLST
Sbjct: 832 FLGTLIKVHMCRDDLPKAITVFEEICQKYRTTPWKTELTCRLIQAEDAANLQRITDLSTE 891
Query: 604 IHGEVNSLYDLMLSFLDAEVLR 625
+HGEVNSLYDL+ +F+D +R
Sbjct: 892 VHGEVNSLYDLVFAFVDCGRIR 913
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 138/306 (45%), Gaps = 48/306 (15%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + S L + G+EP+ TY +L+ Y + GD++ TKI L+
Sbjct: 142 YNALLRVYLDNEHAFSPTEFLADLKSKGVEPNRVTYQRLISRYCQEGDIEG-ATKI--LE 198
Query: 222 PQSELFLCFSFQLTNLLILVSS---DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
E L + + N LI+ S D+ SA GIL +M+QAGL+PSA TYT L+ GY + G
Sbjct: 199 YMREKQLPVNEYVFNALIMGHSQADDLESATGILAVMAQAGLQPSADTYTTLLSGYGRKG 258
Query: 279 DMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
D++ + + L Q L++ D L+II++LAV+G+ + +D L G
Sbjct: 259 DIEYITKTLESCEQKEVYLLDKDLLEIIYSLAVNGNADKVDP--------------LIGK 304
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL------AQNGSSLVNGDYLDIIHALA 389
+ QAG A ++ G + +LL +N L N + +
Sbjct: 305 IRKQAGYNQDA---VNVILRLINRGQEEVAMKLLETMPRATRNDGELANTGGFLVKQLVK 361
Query: 390 VSGHGEYIDEIISKIQPGVGYSADAANHIYHL-----INKGQIDAAYRIVNTLARSANIN 444
E + EI K+Q S+ +H Y L + G + AY ++ L N
Sbjct: 362 ARRPAEKVMEICEKLQ-----SSGMNHHAYLLALETALKNGITELAYPLLKAL------N 410
Query: 445 GEQLPV 450
G+ PV
Sbjct: 411 GQNQPV 416
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 11/219 (5%)
Query: 623 VLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSVGVTIGSITSAYVVH 682
VL++L+ EF + + ET+R+YV+P L N EV LRSVG++ +S V
Sbjct: 435 VLKVLRTMADEFDMLPSGETVREYVIPNLGVKNH--DEVIHLLRSVGISPAVASSGCVYG 492
Query: 683 MLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLVTVVRAVCENWEK-GEE 741
L +N+KEAA +A ++A Y+ V R L + + T+D S + R + +N + G +
Sbjct: 493 ALENNNIKEAANIAARYKAFYSPGVYRKPLVSALVATRDFESYIRFTRYLHDNLLRVGSK 552
Query: 742 GEKEEEGEEKTAGQLIDMDRIFAGNVLLDI---YKATRQDPNVVSHLEQLLNAFVEHAIP 798
E+ ++ E+ G + G+++ D +K R V L +L FV +
Sbjct: 553 EEQNDQVGEQEQGSSPNFQAEVLGSMIYDALVSFKNKR-----VEALRTILTGFVNQGLT 607
Query: 799 ISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPLQ 837
IS+ ++ IQ LG LT++IS L L + +L P L+
Sbjct: 608 ISSVQAERIQERLGEQLTTEISAMLSQLATGELEPVQLE 646
>gi|390362882|ref|XP_003730248.1| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like [Strongylocentrotus purpuratus]
Length = 572
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 106/138 (76%), Gaps = 6/138 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL D++HYNALLRVYL NEH FSPTDFLA++ES GI+PNR+TYQ +LIS YC
Sbjct: 139 ELGTTFDVTHYNALLRVYLQNEHKFSPTDFLAQMESHGIDPNRITYQ------RLISAYC 192
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G+I+GATKILEFM+ K P++EG+FN+LI GH +A D+ +A+ IL +M GLEPS+
Sbjct: 193 LQGDIQGATKILEFMKSKDLPVTEGIFNSLITGHGRAGDLENAQNILNVMRSVGLEPSSD 252
Query: 196 TYTKLMCGYAKHGDMDSI 213
TYT LMC YA+ G+M+SI
Sbjct: 253 TYTALMCAYAEKGEMESI 270
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 107/222 (48%), Gaps = 23/222 (10%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS---LVNGDYLDII 303
S L M G++P+ TY +L+ Y GD+ ++L S + G I
Sbjct: 164 SPTDFLAQMESHGIDPNRITYQRLISAYCLQGDIQGATKILEFMKSKDLPVTEG----IF 219
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
++L ++GHG D +A NI +M GLEPS+ TYT LMC YA+ G+M+
Sbjct: 220 NSL-ITGHGRAGDLENA----QNIL------NVMRSVGLEPSSDTYTALMCAYAEKGEME 268
Query: 364 SIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH 420
SI +L L + L YL + ++LA G +++ +++ K+Q GY DA N
Sbjct: 269 SITKLSQELESDNVILSGRCYLSVAYSLATCGQSQHLQQVLEKVQLNAGYIPDAINLSLS 328
Query: 421 LINKGQIDAAYRIVNTLA--RSANINGEQLPVGGFLVRHMVK 460
L+ KGQ +AA+ IV R + E G F + H V+
Sbjct: 329 LMTKGQSEAAFEIVKMFQGLRVDQNSAEPQNQGNFFIDHAVQ 370
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 91/171 (53%), Gaps = 11/171 (6%)
Query: 154 TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 213
TF ++ +NAL+ + Q S L M G++P+ TY +L+ Y GD+
Sbjct: 143 TFDVTH--YNALLRVYLQNEHKFSPTDFLAQMESHGIDPNRITYQRLISAYCLQGDIQGA 200
Query: 214 KTKIPSLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKL 270
+ +K + L + + N LI + D+ +A+ IL +M GLEPS+ TYT L
Sbjct: 201 TKILEFMKSKD---LPVTEGIFNSLITGHGRAGDLENAQNILNVMRSVGLEPSSDTYTAL 257
Query: 271 MCGYAKHGDMDSVRRLLA--QSGSSLVNGD-YLDIIHALAVSGHGEYIDEV 318
MC YA+ G+M+S+ +L +S + +++G YL + ++LA G +++ +V
Sbjct: 258 MCAYAEKGEMESITKLSQELESDNVILSGRCYLSVAYSLATCGQSQHLQQV 308
>gi|390366015|ref|XP_791375.3| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like [Strongylocentrotus purpuratus]
Length = 1106
Score = 182 bits (462), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 106/138 (76%), Gaps = 6/138 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL D++HYNALLRVYL NE+ FSPTDFLA++ES GI+PNR+TYQ +LIS YC
Sbjct: 161 ELGTTFDVTHYNALLRVYLQNENKFSPTDFLAQMESHGIDPNRITYQ------RLISAYC 214
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G+I+GATKILEFM+ K P++EG+FN+LI GH +A D+ +A+ IL +M GLEPS+
Sbjct: 215 LQGDIQGATKILEFMKSKDLPVTEGIFNSLITGHGRAGDLENAQNILNVMRSVGLEPSSD 274
Query: 196 TYTKLMCGYAKHGDMDSI 213
TYT LMC YA+ G+M+SI
Sbjct: 275 TYTALMCAYAEKGEMESI 292
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 107/222 (48%), Gaps = 23/222 (10%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS---LVNGDYLDII 303
S L M G++P+ TY +L+ Y GD+ ++L S + G I
Sbjct: 186 SPTDFLAQMESHGIDPNRITYQRLISAYCLQGDIQGATKILEFMKSKDLPVTEG----IF 241
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
++L ++GHG D +A NI +M GLEPS+ TYT LMC YA+ G+M+
Sbjct: 242 NSL-ITGHGRAGDLENA----QNIL------NVMRSVGLEPSSDTYTALMCAYAEKGEME 290
Query: 364 SIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH 420
SI +L L + L YL + ++LA G +++ +++ K+Q GY DA N
Sbjct: 291 SITKLSQELESDNVILSGRCYLSVAYSLATCGQSQHLQQVLEKVQLNAGYIPDAINLSLS 350
Query: 421 LINKGQIDAAYRIVNTLA--RSANINGEQLPVGGFLVRHMVK 460
L+ KGQ +AA+ IV R + E G F + H V+
Sbjct: 351 LMTKGQSEAAFEIVKMFQGLRVDQNSAEPQNQGNFFIDHAVQ 392
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 92/171 (53%), Gaps = 11/171 (6%)
Query: 154 TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 213
TF ++ +NAL+ + Q + S L M G++P+ TY +L+ Y GD+
Sbjct: 165 TFDVTH--YNALLRVYLQNENKFSPTDFLAQMESHGIDPNRITYQRLISAYCLQGDIQGA 222
Query: 214 KTKIPSLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKL 270
+ +K + L + + N LI + D+ +A+ IL +M GLEPS+ TYT L
Sbjct: 223 TKILEFMKSKD---LPVTEGIFNSLITGHGRAGDLENAQNILNVMRSVGLEPSSDTYTAL 279
Query: 271 MCGYAKHGDMDSVRRLLA--QSGSSLVNGD-YLDIIHALAVSGHGEYIDEV 318
MC YA+ G+M+S+ +L +S + +++G YL + ++LA G +++ +V
Sbjct: 280 MCAYAEKGEMESITKLSQELESDNVILSGRCYLSVAYSLATCGQSQHLQQV 330
Score = 46.2 bits (108), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Query: 476 IYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTD 535
I HL + Q+ AA +V L + ++ +++ F + + + + ++V + + +
Sbjct: 779 ICHLAKENQLPAALDMVQEL-KELGVDTDRMEKQTFHILNELASLGLSEEVERIFETMVE 837
Query: 536 ENLHPRAFNL-AVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACL 594
L NL ++ A++ K D GA+ C ++ P ++L R ++ L
Sbjct: 838 LGLVKPTNNLVGPVVGAYMAKNDLEGALACIRDCQAKYSIMPHFQDVLVRLVEEGHTDQL 897
Query: 595 QRITDLSTSIHGEVNSLYDLMLSF 618
Q+ D ++ HG++N LYDL+ +F
Sbjct: 898 QKAMDFASQQHGDINMLYDLIFAF 921
>gi|321477891|gb|EFX88849.1| hypothetical protein DAPPUDRAFT_304790 [Daphnia pulex]
Length = 1365
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 114/168 (67%), Gaps = 8/168 (4%)
Query: 56 EPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIE 115
EP + L E+ + + G VPLDISHYNALLRVYL+NEH+F P FL LE + I+
Sbjct: 131 EPPISRTKL-VEEVWKMFEG-FGVPLDISHYNALLRVYLENEHSFDPMKFLHLLEGKEIQ 188
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
PNRVTYQ +L+S YCQ G+I+GA++ILE M+ K PI E VFN+L+ GH+ D+
Sbjct: 189 PNRVTYQ------RLLSAYCQKGDIDGASQILEIMKSKDLPIGEQVFNSLVMGHANTGDL 242
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
SA+G++ +MSQAGLEP +TY L+CGYAKHG + + + + K +
Sbjct: 243 ESAKGVIKVMSQAGLEPDGETYRALLCGYAKHGHLQDLTSALSECKSK 290
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 134/592 (22%), Positives = 246/592 (41%), Gaps = 116/592 (19%)
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-QSGSSLVNGDYLDIIHALAVSG 310
L ++ ++P+ TY +L+ Y + GD+D ++L L G+ + ++L V G
Sbjct: 179 LHLLEGKEIQPNRVTYQRLLSAYCQKGDIDGASQILEIMKSKDLPIGE--QVFNSL-VMG 235
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
H D SA +MSQAGLEP +TY L+CGYAKHG + + L+
Sbjct: 236 HANTGDLESAKGVI----------KVMSQAGLEPDGETYRALLCGYAKHGHLQDLTSALS 285
Query: 371 QNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAA 430
+ S ++ H + E++ Y+A H
Sbjct: 286 ECKSK-------------EIAIHDRSLMEVL--------YTAAVHGH------------- 311
Query: 431 YRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYR 490
IV+ +L+ M + + GY+ D N I LIN Q+D A++
Sbjct: 312 SEIVD-----------------YLLSQMSRFS----GYNQDCFNVILRLINLQQVDQAFK 350
Query: 491 IVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIK 550
++ T+ NG+ P G F ++ ++K+N P KV+++C ++ + L+ RA+ A+ +
Sbjct: 351 VLKTMKPIQLTNGQVSPQGNFFIKQIIKSNIPPQKVISLCDQIVETGLNTRAYFTALEL- 409
Query: 551 AHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEVNS 610
+ G E + Q + + E+L+ + + + + GE
Sbjct: 410 -----SNALGKSEMSNLLLKQIQK---QKEMLR-------PSAFWPLLTAQSKVSGEK-- 452
Query: 611 LYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSVGV 670
LDA LR + A V N +T+ VLP ++ ++ G + +LR+V V
Sbjct: 453 ------GILDA--LRQM----AAIQVMPNVDTISQRVLPFMA--DEEVGTLIRKLRAVDV 498
Query: 671 TIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLVTVVR 730
+ ++ +V L + A +A + +R +YL+T+D S +++
Sbjct: 499 PPSVVATSLIVRSLNNQDFTTAINVASKIFIRNESMQIRYAAREAYLKTRDASSTAKLLK 558
Query: 731 AVCENWEKGEEGEKEEEGEEKTAGQLIDMDRIFAGNVLLDIYKATRQDPN-VVSHLEQLL 789
++ E + E ++ AG AG ++++I+ + PN + +E LL
Sbjct: 559 SMLRVLET---PDVENNVTDQAAG--------LAGPLIMEIFD---RAPNPKLEVVEPLL 604
Query: 790 NAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPLQYVPS 841
A E+ I + + +IQ +T +++ L L S L P + PS
Sbjct: 605 KAMHENGISLPTSAIQHIQEKSSEEMTDSVAQLLVELGSGKLAPTDVFAYPS 656
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 95/185 (51%), Gaps = 13/185 (7%)
Query: 156 PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT 215
P+ +NAL+ + + L ++ ++P+ TY +L+ Y + GD+D
Sbjct: 153 PLDISHYNALLRVYLENEHSFDPMKFLHLLEGKEIQPNRVTYQRLLSAYCQKGDIDGASQ 212
Query: 216 KIPSLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
+ +K + L Q+ N L++ + D+ SA+G++ +MSQAGLEP +TY L+C
Sbjct: 213 ILEIMKSKD---LPIGEQVFNSLVMGHANTGDLESAKGVIKVMSQAGLEPDGETYRALLC 269
Query: 273 GYAKHGDMDSVRRLLAQSGSSLV---NGDYLDIIHALAVSGHGEYID----EVSAIVCFV 325
GYAKHG + + L++ S + + +++++ AV GH E +D ++S +
Sbjct: 270 GYAKHGHLQDLTSALSECKSKEIAIHDRSLMEVLYTAAVHGHSEIVDYLLSQMSRFSGYN 329
Query: 326 NICFH 330
CF+
Sbjct: 330 QDCFN 334
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 54/78 (69%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+K HV+++D A++ F CV ++R TP+K L+ + I+ EDA LQ+I D S +HGE
Sbjct: 819 LVKVHVVRKDIETALKVFLECVEKYRITPYKSALVTQLIETEDAQRLQQIMDASIKVHGE 878
Query: 608 VNSLYDLMLSFLDAEVLR 625
+NSLYDL+ SFL+ +R
Sbjct: 879 MNSLYDLIFSFLECGRIR 896
>gi|90077230|dbj|BAE88295.1| unnamed protein product [Macaca fascicularis]
Length = 661
Score = 176 bits (446), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 133/204 (65%), Gaps = 11/204 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 74 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIASYCNTGDIE 127
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM++K P++E VF+AL+ GH++A DM +AE ILT+M +AG+EP TY L+
Sbjct: 128 GASKILGFMKNKDLPVTEAVFSALVTGHARAGDMQNAENILTVMREAGIEPGPDTYLALL 187
Query: 202 CGYAKHGDMDSIKTKIPSL-KPQSELFLCFSFQL-TNLLIL--VSSDMASAEGILTMMSQ 257
YA+ GD+D +K + L + +LF C Q+ NLL L ++ D A+ + + +
Sbjct: 188 NAYAEKGDIDHVKQTLEKLVELTQKLFECDRDQMYYNLLKLYKMNGDWQRADAVWNKIQE 247
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMD 281
+ P +T +L+ + G+ +
Sbjct: 248 ENIIPREKTL-RLLAEILRDGNQE 270
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 8/132 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 78 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNTGDIEGASKILGFMK 137
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 138 NKDLPVTEA--VFSALVTGHA--RAGDMQNAENILTVMREAGIEPGPDTYLALLNAYAEK 193
Query: 278 GDMDSVRRLLAQ 289
GD+D V++ L +
Sbjct: 194 GDIDHVKQTLEK 205
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 23/168 (13%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDY--LDIIH 304
S L M +A ++P+ TY +L+ Y GD++ ++L + N D + +
Sbjct: 93 SPTDFLAKMEEANIQPNRVTYQRLIASYCNTGDIEGASKILG----FMKNKDLPVTEAVF 148
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
+ V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D
Sbjct: 149 SALVTGHARAGDMQNA----ENIL------TVMREAGIEPGPDTYLALLNAYAEKGDIDH 198
Query: 365 IRRL---LAQNGSSLVNGD----YLDIIHALAVSGHGEYIDEIISKIQ 405
+++ L + L D Y +++ ++G + D + +KIQ
Sbjct: 199 VKQTLEKLVELTQKLFECDRDQMYYNLLKLYKMNGDWQRADAVWNKIQ 246
>gi|328711546|ref|XP_001944507.2| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like [Acyrthosiphon pisum]
Length = 1396
Score = 172 bits (437), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 134/240 (55%), Gaps = 42/240 (17%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
++ VPLDISHYN LL+VYL+N + FSPT+FL LE + I PNRVT+Q LI+ Y
Sbjct: 145 NQIGVPLDISHYNTLLKVYLENNYVFSPTEFLEDLEKRDITPNRVTFQHLITG------Y 198
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
CQ+G+I GA++ILE+MRDK PI++ VFNAL+ GHSQ +DM SAEG+L +M ++ LEP++
Sbjct: 199 CQNGDIAGASRILEYMRDKQLPINKIVFNALVMGHSQNSDMESAEGVLNVMKESNLEPTS 258
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TYT L GYAK+G D+A +L
Sbjct: 259 DTYTLLASGYAKNG-----------------------------------DIAKVVDVLDT 283
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNGDYLDIIHALAVSGHGE 313
+ S + Y ++ A +G D + ++ + +S N D ++ I+ L SGH E
Sbjct: 284 CDNKEINLSDKEYLDIVYSLAINGHGDKIDQITTRIPKTSGYNQDAINCIYKLITSGHEE 343
Score = 159 bits (401), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 143/593 (24%), Positives = 262/593 (44%), Gaps = 115/593 (19%)
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
+ + + P+ T+ L+ GY ++GD+ R+L + + + + +AL V GH +
Sbjct: 179 LEKRDITPNRVTFQHLITGYCQNGDIAGASRILEYMRDKQLPINKI-VFNAL-VMGHSQN 236
Query: 315 IDEVSAIVCFVNICFHWLEGPM--MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
D SA EG + M ++ LEP++ TYT L GYAK+GD+ + +L
Sbjct: 237 SDMESA------------EGVLNVMKESNLEPTSDTYTLLASGYAKNGDIAKVVDVLDTC 284
Query: 373 GSSLVN---GDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDA 429
+ +N +YLDI+ Y L G D
Sbjct: 285 DNKEINLSDKEYLDIV---------------------------------YSLAINGHGDK 311
Query: 430 AYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAY 489
+I + +++ GY+ DA N IY LI G + A+
Sbjct: 312 IDQITTRIPKTS-------------------------GYNQDAINCIYKLITSGHEEIAF 346
Query: 490 RIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLI 549
++ +T+ + +G P+G FL+ H+ K N +D V+ C +L E + +AF +A +
Sbjct: 347 KVFDTMTKPLKADGTSPPIGRFLIGHLTKVNSSLDNVIGFCKKLVSEGTNSKAFEIATEM 406
Query: 550 KAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEVN 609
LK G+++ + F+ K + +++ ++ DL
Sbjct: 407 ---ALK---NGSIDI---ALGMFKYLKEKDQPIRQHYFWPIFVAKIKLNDLQ-------- 449
Query: 610 SLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSVG 669
L D +L + E+ + N +TLR Y+LP + N +V ++L+ +G
Sbjct: 450 GLKD------------VLSIMVNEYELNPNIDTLRYYILPTMFKNNLDGIKVINELQMLG 497
Query: 670 VTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSLVTVV 729
+ G+ T + V+++L + ++ AA +A S RA Y +VR L ++L D+ SL+ ++
Sbjct: 498 IPSGTTTHSLVLYLLSEKKIRIAADIAASSRAFYVPSLVRRPLVNAFLAGNDIQSLIILL 557
Query: 730 RAVCENWEK-----GEEGEKEEEGEEK---TAGQLIDMDRIFAGNVLLDIYKATRQDPNV 781
+ +C + + E K+++ ++ T Q+ +M R F VL+DI ++ +Q V
Sbjct: 558 QQICNGFSRYSLVTTPELSKQDKFDKNTIHTEEQITEM-REFISQVLIDIVRSLKQTSGV 616
Query: 782 VSHLEQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQ 834
V + +LL + I+AF + +QN L LT +I+ L LT +L+P+
Sbjct: 617 VEIVHELLENMYGKGLGINAFGLEQVQNHLQGKLTFEITNLLENLTDSNLVPK 669
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 57/76 (75%)
Query: 545 LAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSI 604
L LIK H++ D GA++ FE+C +R TPWK EL +FIQAEDA LQ +TDLST++
Sbjct: 856 LGPLIKVHIVNNDIKGALDKFEWCCKTYRCTPWKNELALKFIQAEDAISLQVLTDLSTTV 915
Query: 605 HGEVNSLYDLMLSFLD 620
HGEVNSLYDLM +F++
Sbjct: 916 HGEVNSLYDLMFAFIE 931
>gi|417406406|gb|JAA49863.1| Putative bicoid mrna stability factor [Desmodus rotundus]
Length = 1395
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 110/147 (74%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NEH FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 162 DVSHYNALLKVYLQNEHKFSPTDFLAKMEEANIQPNRVTYQ------RLIAAYCNMGDIE 215
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M +AG+EP A TY L+
Sbjct: 216 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMREAGIEPGADTYLALL 275
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D ++ + ++ +S+L+L
Sbjct: 276 NAYAEKGDIDRVRQTLEKVE-KSDLYL 301
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 166 YNALLKVYLQNEHKFSPTDFLAKMEEANIQPNRVTYQRLIAAYCNMGDIEGASKILGFMK 225
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M +AG+EP A TY L+ YA+
Sbjct: 226 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMREAGIEPGADTYLALLNAYAEK 281
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D VR+ L + S L++ D L II + + +G+ +Y+ E+
Sbjct: 282 GDIDRVRQTLEKVEKSDLYLMDRDLLQIIFSFSKAGYPQYVSEI 325
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 181 SPTDFLAKMEEANIQPNRVTYQRLIAAYCNMGDIEGASKILGFMKTK--DLPVTEAVFSA 238
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP A TY L+ YA+ GD+D +R
Sbjct: 239 LVTGHARAGDMENA----ENIL------TVMREAGIEPGADTYLALLNAYAEKGDIDRVR 288
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ KI DA N I L+
Sbjct: 289 QTLEKVEKSDLYLMDRDLLQIIFSFSKAGYPQYVSEILDKITYERRSIPDAMNLILLLVT 348
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG 465
+ D A +++ LA + G F +RH V + P
Sbjct: 349 EKLEDIALQVL--LACPVSKEDGLSDFGNFFLRHCVTMDTPA 388
>gi|61402491|gb|AAH91910.1| Lrpprc protein [Danio rerio]
Length = 807
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 123/191 (64%), Gaps = 9/191 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V D+SHYNALL+ YL NE FSPTDFLAK+E+ ++PNRVTYQ +LI+ YC
Sbjct: 174 ELGVSYDVSHYNALLKTYLQNEFRFSPTDFLAKMEAANVQPNRVTYQ------RLIAAYC 227
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
++GNIEGA+ IL FM++K PI+E VFN+L+ GH++A D+ S+EGIL++M AG+EP
Sbjct: 228 EEGNIEGASAILGFMKNKDLPITEAVFNSLVVGHARAGDITSSEGILSVMKSAGIEPGPD 287
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS--FQLTNLLILVSSDMASAEGILT 253
TY L+ YA+ GD+D IK + ++ ++ FL QL + L + E +
Sbjct: 288 TYLSLLNMYAEKGDIDKIKQTLDVVE-NADFFLMDRDLMQLVSSLARTGHEQHVPEIVSR 346
Query: 254 MMSQAGLEPSA 264
M + G P A
Sbjct: 347 MRHERGYVPDA 357
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 114/237 (48%), Gaps = 29/237 (12%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M A ++P+ TY +L+ Y + G+++ +L + N D L I A+
Sbjct: 199 SPTDFLAKMEAANVQPNRVTYQRLIAAYCEEGNIEGASAILG----FMKNKD-LPITEAV 253
Query: 307 ---AVSGHGEYIDEVSAIVCFVNICFHWLEG--PMMSQAGLEPSAQTYTKLMCGYAKHGD 361
V GH D S+ EG +M AG+EP TY L+ YA+ GD
Sbjct: 254 FNSLVVGHARAGDITSS------------EGILSVMKSAGIEPGPDTYLSLLNMYAEKGD 301
Query: 362 MDSIRRLL--AQNGSS-LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHI 418
+D I++ L +N L++ D + ++ +LA +GH +++ EI+S+++ GY DA N
Sbjct: 302 IDKIKQTLDVVENADFFLMDRDLMQLVSSLARTGHEQHVPEIVSRMRHERGYVPDAINLC 361
Query: 419 YHLINKGQIDAAYRIVNTLARSANINGEQLP-VGGFLVRHMV---KTNQPGVGYSAD 471
+LI G A+ ++ +L + + P G F +RH V K+ + VG+ D
Sbjct: 362 LNLITHGHEKTAFSVLKSLTGMLDTHTGDTPDFGNFFLRHCVNMDKSAEDIVGFCKD 418
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M A ++P+ TY +L+ Y + G+++ + +K
Sbjct: 184 YNALLKTYLQNEFRFSPTDFLAKMEAANVQPNRVTYQRLIAAYCEEGNIEGASAILGFMK 243
Query: 222 PQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ L + + N L++ + D+ S+EGIL++M AG+EP TY L+ YA+ G
Sbjct: 244 NKD---LPITEAVFNSLVVGHARAGDITSSEGILSVMKSAGIEPGPDTYLSLLNMYAEKG 300
Query: 279 DMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
D+D +++ L + L++ D + ++ +LA +GH +++ E+
Sbjct: 301 DIDKIKQTLDVVENADFFLMDRDLMQLVSSLARTGHEQHVPEI 343
>gi|217272841|ref|NP_001136064.1| leucine-rich PPR-motif containing [Danio rerio]
Length = 1436
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 104/139 (74%), Gaps = 6/139 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V D+SHYNALL+ YL NE FSPTDFLAK+E+ ++PNRVTYQ +LI+ YC
Sbjct: 174 ELGVSYDVSHYNALLKTYLQNEFRFSPTDFLAKMEAANVQPNRVTYQ------RLIAAYC 227
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
++GNIEGA+ IL FM++K PI+E VFN+L+ GH++A D+ S+EGIL++M AG+EP
Sbjct: 228 EEGNIEGASAILGFMKNKDLPITEAVFNSLVVGHARAGDITSSEGILSVMKSAGIEPGPD 287
Query: 196 TYTKLMCGYAKHGDMDSIK 214
TY L+ YA+ GD+D IK
Sbjct: 288 TYLSLLNMYAEKGDIDKIK 306
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 29/237 (12%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M A ++P+ TY +L+ Y + G+++ +L + L I A+
Sbjct: 199 SPTDFLAKMEAANVQPNRVTYQRLIAAYCEEGNIEGASAILG-----FMKNKDLPITEAV 253
Query: 307 ---AVSGHGEYIDEVSAIVCFVNICFHWLEG--PMMSQAGLEPSAQTYTKLMCGYAKHGD 361
V GH D S+ EG +M AG+EP TY L+ YA+ GD
Sbjct: 254 FNSLVVGHARAGDITSS------------EGILSVMKSAGIEPGPDTYLSLLNMYAEKGD 301
Query: 362 MDSIRRLL--AQNGSS-LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHI 418
+D I++ L +N L++ D + ++ +LA +GH +++ EI+S+++ GY DA N
Sbjct: 302 IDKIKQTLDVVENADFFLMDRDLMQLVSSLARTGHEQHVPEIVSRMRHERGYVPDAINLC 361
Query: 419 YHLINKGQIDAAYRIVNTLARSANINGEQLP-VGGFLVRHMV---KTNQPGVGYSAD 471
+LI G A+ ++ +L + + P G F +RH V K+ + VG+ D
Sbjct: 362 LNLITHGHEKTAFSVLKSLTGMLDTHTGDTPDFGNFFLRHCVNMDKSAEDIVGFCKD 418
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 88/163 (53%), Gaps = 9/163 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M A ++P+ TY +L+ Y + G+++ + +K
Sbjct: 184 YNALLKTYLQNEFRFSPTDFLAKMEAANVQPNRVTYQRLIAAYCEEGNIEGASAILGFMK 243
Query: 222 PQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ L + + N L++ + D+ S+EGIL++M AG+EP TY L+ YA+ G
Sbjct: 244 NKD---LPITEAVFNSLVVGHARAGDITSSEGILSVMKSAGIEPGPDTYLSLLNMYAEKG 300
Query: 279 DMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
D+D +++ L + L++ D + ++ +LA +GH +++ E+
Sbjct: 301 DIDKIKQTLDVVENADFFLMDRDLMQLVSSLARTGHEQHVPEI 343
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ ++ D+ GA + C Q+ P +L+ ++ DA LQ++ + T GE
Sbjct: 855 LVTCYLESGDHAGAFDAVMECHKQYNQLPKIHDLMCSLVEKGDALLLQKVMEFLTLERGE 914
Query: 608 VNSLYDLMLSFL 619
+ LYDL +FL
Sbjct: 915 MMMLYDLFFAFL 926
>gi|395829777|ref|XP_003788020.1| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Otolemur garnettii]
Length = 1469
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/147 (55%), Positives = 108/147 (73%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NEH FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 236 DVSHYNALLKVYLQNEHKFSPTDFLAKMEEANIQPNRVTYQ------RLIAAYCNGGDIE 289
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K PI+E VF+ALI GH++A DM +A+ ILT+M + G+EP TY L+
Sbjct: 290 GASKILGFMKTKDLPITETVFSALITGHARAGDMENAQNILTVMKETGIEPGPDTYLSLL 349
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL+L
Sbjct: 350 HAYAEKGDIDHVKQTLKKVE-ESELYL 375
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 17/221 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 255 SPTDFLAKMEEANIQPNRVTYQRLIAAYCNGGDIEGASKILGFMKTK--DLPITETVFSA 312
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
++GH D +A NI +M + G+EP TY L+ YA+ GD+D ++
Sbjct: 313 LITGHARAGDMENA----QNIL------TVMKETGIEPGPDTYLSLLHAYAEKGDIDHVK 362
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ ++ EI+ KI Y DA N I L+
Sbjct: 363 QTLKKVEESELYLMDRDLLQIIFSFSKAGYPQHASEILEKIGYERRYIPDAMNLILLLVT 422
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +I+ LA + G F ++H V N P
Sbjct: 423 EKLEDTALQIL--LACPLSKEDGLSDFGSFFLQHCVTMNVP 461
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 240 YNALLKVYLQNEHKFSPTDFLAKMEEANIQPNRVTYQRLIAAYCNGGDIEGASKILGFMK 299
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +A+ ILT+M + G+EP TY L+ YA+
Sbjct: 300 TKDLPITET--VFSALITGHA--RAGDMENAQNILTVMKETGIEPGPDTYLSLLHAYAEK 355
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V++ L + S L++ D L II + + +G+ ++ E+
Sbjct: 356 GDIDHVKQTLKKVEESELYLMDRDLLQIIFSFSKAGYPQHASEI 399
>gi|350582454|ref|XP_003125231.3| PREDICTED: LOW QUALITY PROTEIN: leucine-rich PPR motif-containing
protein, mitochondrial [Sus scrofa]
Length = 1394
Score = 170 bits (430), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/147 (55%), Positives = 109/147 (74%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DISHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC +G+IE
Sbjct: 162 DISHYNALLKVYLQNEYKFSPTDFLAKMEKANIQPNRVTYQ------RLIAAYCNEGDIE 215
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K PI+E VF+AL+ GH++A DM +AE ILT+M +AG+EP TY L+
Sbjct: 216 GASKILGFMKTKDLPITEAVFSALVTGHARAGDMENAENILTVMKEAGIEPGPDTYLALL 275
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +S+ FL
Sbjct: 276 NAYAEKGDIDHVKQTLEKVE-KSDHFL 301
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 17/221 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 181 SPTDFLAKMEKANIQPNRVTYQRLIAAYCNEGDIEGASKILGFMKTK--DLPITEAVFSA 238
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 239 LVTGHARAGDMENA----ENIL------TVMKEAGIEPGPDTYLALLNAYAEKGDIDHVK 288
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ KI Y D N I L+
Sbjct: 289 QTLEKVEKSDHFLMDRDLLQIIFSFSKAGYPQYVSEILEKITYERRYIPDTMNLILLLVT 348
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +I+ LA + G F +RH V N P
Sbjct: 349 EKLEDTALQIL--LACPVSREDSLSDFGSFFLRHCVTMNTP 387
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 9/163 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ +KI
Sbjct: 166 YNALLKVYLQNEYKFSPTDFLAKMEKANIQPNRVTYQRLIAAYCNEGDIEG-ASKILGFM 224
Query: 222 PQSELFL---CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+L + FS +T + DM +AE ILT+M +AG+EP TY L+ YA+ G
Sbjct: 225 KTKDLPITEAVFSALVTGHA--RAGDMENAENILTVMKEAGIEPGPDTYLALLNAYAEKG 282
Query: 279 DMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
D+D V++ L + S L++ D L II + + +G+ +Y+ E+
Sbjct: 283 DIDHVKQTLEKVEKSDHFLMDRDLLQIIFSFSKAGYPQYVSEI 325
>gi|355751282|gb|EHH55537.1| hypothetical protein EGM_04765, partial [Macaca fascicularis]
Length = 1347
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 110/147 (74%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ+LI++ YC G+IE
Sbjct: 111 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAS------YCNTGDIE 164
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM++K P++E VF+AL+ GH++A DM +AE ILT+M +AG+EP TY L+
Sbjct: 165 GASKILGFMKNKDLPVTEAVFSALVTGHARAGDMQNAENILTVMREAGIEPGPDTYLALL 224
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL L
Sbjct: 225 NAYAEKGDIDHVKQTLEKVE-KSELHL 250
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDY--LDIIH 304
S L M +A ++P+ TY +L+ Y GD++ ++L + N D + +
Sbjct: 130 SPTDFLAKMEEANIQPNRVTYQRLIASYCNTGDIEGASKILG----FMKNKDLPVTEAVF 185
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
+ V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D
Sbjct: 186 SALVTGHARAGDMQNA----ENIL------TVMREAGIEPGPDTYLALLNAYAEKGDIDH 235
Query: 365 IRRLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHL 421
+++ L + S L++ D II + + +G+ +Y+ EI+ K+ Y DA N I L
Sbjct: 236 VKQTLEKVEKSELHLMDRDLFQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLL 295
Query: 422 INKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
+ + D A +I+ LA + G F +RH V N P
Sbjct: 296 VTEKLEDVALQIL--LACPISKEDGISDFGSFFLRHCVTMNTP 336
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 115 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNTGDIEGASKILGFMK 174
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 175 NKDLPVTEA--VFSALVTGHA--RAGDMQNAENILTVMREAGIEPGPDTYLALLNAYAEK 230
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV-SAIVC 323
GD+D V++ L + S L++ D II + + +G+ +Y+ E+ + C
Sbjct: 231 GDIDHVKQTLEKVEKSELHLMDRDLFQIIFSFSKAGYPQYVSEILEKVTC 280
>gi|390474529|ref|XP_003734795.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich PPR motif-containing
protein, mitochondrial [Callithrix jacchus]
Length = 1722
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 111/153 (72%), Gaps = 7/153 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL D+SHYNALL+VYL NE+ FS TDFLAK+E I+PNRVTYQ+LI++ YC
Sbjct: 479 ELGAVYDVSHYNALLKVYLQNEYKFSQTDFLAKMEEANIQPNRVTYQRLIAS------YC 532
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G+IEGA+KIL FM+ K PI+E VFN+LI GH++A DM +AE ILT+M +AG+EP
Sbjct: 533 NMGDIEGASKILGFMKTKDLPITEAVFNSLIRGHARAGDMENAENILTVMREAGIEPGPD 592
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
TY L+ YA+ GD+D +K + ++ +SEL+L
Sbjct: 593 TYLALLNAYAEKGDIDHVKQTLEKVE-KSELYL 624
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 23/224 (10%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + L I A+
Sbjct: 504 SQTDFLAKMEEANIQPNRVTYQRLIASYCNMGDIEGASKILG-----FMKTKDLPITEAV 558
Query: 307 ---AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+ GH D +A NI +M +AG+EP TY L+ YA+ GD+D
Sbjct: 559 FNSLIRGHARAGDMENA----ENIL------TVMREAGIEPGPDTYLALLNAYAEKGDID 608
Query: 364 SIRRLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH 420
+++ L + S L + D L II + A +G+ +Y+ I+ K+ Y DA N I
Sbjct: 609 HVKQTLEKVEKSELYLTDRDLLQIIFSFAKAGYPQYVSGILEKLTCERRYIPDAINLILL 668
Query: 421 LINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
L+ + D A +I+ LA + G F +RH V N P
Sbjct: 669 LVTEKLEDTALQIL--LACPVSKEDSLNDFGNFFLRHCVTMNTP 710
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 9/160 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 489 YNALLKVYLQNEYKFSQTDFLAKMEEANIQPNRVTYQRLIASYCNMGDIEGASKILGFMK 548
Query: 222 PQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ L + + N LI + DM +AE ILT+M +AG+EP TY L+ YA+ G
Sbjct: 549 TKD---LPITEAVFNSLIRGHARAGDMENAENILTVMREAGIEPGPDTYLALLNAYAEKG 605
Query: 279 DMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYI 315
D+D V++ L + S L + D L II + A +G+ +Y+
Sbjct: 606 DIDHVKQTLEKVEKSELYLTDRDLLQIIFSFAKAGYPQYV 645
>gi|348574650|ref|XP_003473103.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich PPR motif-containing
protein, mitochondrial-like [Cavia porcellus]
Length = 1395
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 111/153 (72%), Gaps = 7/153 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL D+SHYNALL+VYL N++ FSPTDFLAK+E I+PNRVTYQ +LI+ YC
Sbjct: 160 ELGTVYDVSHYNALLKVYLQNKYKFSPTDFLAKMEEANIQPNRVTYQ------RLIAAYC 213
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G+IEGA+KILEFM+ K P++E VF+AL+ GH++A DM +AE IL +M QAG+EP
Sbjct: 214 NIGDIEGASKILEFMKTKDLPVTEAVFSALVTGHAKAGDMENAENILIVMRQAGIEPGPD 273
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
TY L+ YA+ GD+D +K + ++ +S+L+L
Sbjct: 274 TYLALLNAYAEKGDIDHVKEILEKVQ-KSDLYL 305
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 185 SPTDFLAKMEEANIQPNRVTYQRLIAAYCNIGDIEGASKILEFMKTK--DLPVTEAVFSA 242
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH + D +A + +M QAG+EP TY L+ YA+ GD+D ++
Sbjct: 243 LVTGHAKAGDMENAENILI----------VMRQAGIEPGPDTYLALLNAYAEKGDIDHVK 292
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+L + S L++ D L ++ + + +G+ +Y+ EI+ K Y DA N I L+
Sbjct: 293 EILEKVQKSDLYLMDRDLLQLVFSFSKAGYPQYVSEILEKFTYERRYIPDAINLILLLVT 352
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG 465
+ D A +++ LA Q G F +RH V N P
Sbjct: 353 EKLEDTALQVL--LACPITREDNQSDFGSFFLRHCVTMNTPA 392
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 86/164 (52%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 170 YNALLKVYLQNKYKFSPTDFLAKMEEANIQPNRVTYQRLIAAYCNIGDIEGASKILEFMK 229
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE IL +M QAG+EP TY L+ YA+
Sbjct: 230 TKDLPVTEA--VFSALVTGHA--KAGDMENAENILIVMRQAGIEPGPDTYLALLNAYAEK 285
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V+ +L + S L++ D L ++ + + +G+ +Y+ E+
Sbjct: 286 GDIDHVKEILEKVQKSDLYLMDRDLLQLVFSFSKAGYPQYVSEI 329
Score = 40.0 bits (92), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ H+ K D A+E C +++ P ++L + I+ + +Q+ D + GE
Sbjct: 831 LVTVHLEKGDLPAALEASIDCYKKYKILPRMHDVLCKLIEKGETDLIQKAMDFVSQEQGE 890
Query: 608 VNSLYDLMLSFL 619
+ LYD+ +FL
Sbjct: 891 MTMLYDIFFAFL 902
>gi|260836717|ref|XP_002613352.1| hypothetical protein BRAFLDRAFT_68337 [Branchiostoma floridae]
gi|229298737|gb|EEN69361.1| hypothetical protein BRAFLDRAFT_68337 [Branchiostoma floridae]
Length = 1353
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/140 (55%), Positives = 103/140 (73%), Gaps = 6/140 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ HYNA L+VYLD+EH FS TDFLA +E++ I+PNRVTYQ L+ YCQ G+IE
Sbjct: 134 DVGHYNAQLKVYLDSEHKFSATDFLANMEAKDIQPNRVTYQHLVM------AYCQQGDIE 187
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA K+LEFM+ K FPI+E VFNALI GH +A D+ +A+GIL +M G+EPS TYT L+
Sbjct: 188 GARKVLEFMKTKDFPITEAVFNALITGHGRAGDIENAKGILDVMRNTGIEPSLDTYTALL 247
Query: 202 CGYAKHGDMDSIKTKIPSLK 221
C +A+HGD+ +I+ I L+
Sbjct: 248 CVFAEHGDIKAIEEFISELE 267
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 29/230 (12%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDY--LDIIH 304
SA L M ++P+ TY L+ Y + GD++ R++L + D+ + +
Sbjct: 153 SATDFLANMEAKDIQPNRVTYQHLVMAYCQQGDIEGARKVL----EFMKTKDFPITEAVF 208
Query: 305 ALAVSGHGEY--IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
++GHG I+ I+ +M G+EPS TYT L+C +A+HGD+
Sbjct: 209 NALITGHGRAGDIENAKGIL------------DVMRNTGIEPSLDTYTALLCVFAEHGDI 256
Query: 363 DSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIY 419
+I L + +SL++ DYL ++++LA GH +YI + + KI+ GY DA +
Sbjct: 257 KAIEEFISELEKTETSLMDSDYLQLVYSLATHGHSQYIPQFLEKIRHDQGYVQDAITTVS 316
Query: 420 HLINKGQIDAAYRIVNTLARSANINGEQLPVGG-----FLVRHMVKTNQP 464
LI DAA+ + TL + GE+ G F +R+MV +P
Sbjct: 317 QLIIAECDDAAFEVFLTLP-AVGSAGEEGSTGDPNNGYFFIRNMVYHQRP 365
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 88/162 (54%), Gaps = 9/162 (5%)
Query: 160 GVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS 219
G +NA + + + SA L M ++P+ TY L+ Y + GD++ + +
Sbjct: 136 GHYNAQLKVYLDSEHKFSATDFLANMEAKDIQPNRVTYQHLVMAYCQQGDIEGARKVLEF 195
Query: 220 LKPQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
+K + + + N LI + D+ +A+GIL +M G+EPS TYT L+C +A+
Sbjct: 196 MKTKD---FPITEAVFNALITGHGRAGDIENAKGILDVMRNTGIEPSLDTYTALLCVFAE 252
Query: 277 HGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
HGD+ ++ L ++ +SL++ DYL ++++LA GH +YI
Sbjct: 253 HGDIKAIEEFISELEKTETSLMDSDYLQLVYSLATHGHSQYI 294
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
Query: 479 LINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENL 538
L KG++ A ++ + ++ +L F V H + ++ A+ + + L
Sbjct: 702 LAEKGRLQDALNTIDEMKSKGILSDFRLQNNFFQVLHSLAEKGDLESTRALFDKAMELGL 761
Query: 539 HPRAFNLAV-LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRI 597
NLA L+ +LK+D GA + C ++R P +LL +I+ D LQ
Sbjct: 762 VRPTNNLASHLVTPFLLKDDLEGAWTAIKDCEEKYRIMPRLHDLLCAYIEKGDTDSLQTA 821
Query: 598 TDLSTSIHGEVNSLYDLMLSFL 619
D ++ GE+N LYDL+ +FL
Sbjct: 822 MDYISNSKGEMNMLYDLVFAFL 843
>gi|344288831|ref|XP_003416150.1| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Loxodonta africana]
Length = 1395
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 111/153 (72%), Gaps = 7/153 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+L DISHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC
Sbjct: 157 KLGTTYDISHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIAAYC 210
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G+IEGA+KIL FM+ K P++E VF+AL+ GH++A DM +AE I+T+M +AG+EP
Sbjct: 211 NVGDIEGASKILGFMKSKDLPVTEAVFSALVTGHARAGDMENAENIITVMKEAGIEPGPD 270
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
TY L+ YA+ GD+D +K + +K +S+++L
Sbjct: 271 TYLALLNAYAEKGDIDRVKQTLEKVK-KSDIYL 302
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L S + + + +
Sbjct: 182 SPTDFLAKMEEANIQPNRVTYQRLIAAYCNVGDIEGASKILGFMKSK--DLPVTEAVFSA 239
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 240 LVTGHARAGDMENA----ENII------TVMKEAGIEPGPDTYLALLNAYAEKGDIDRVK 289
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L +I A + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 290 QTLEKVKKSDIYLMDRDLLQVIFAFSKAGYPQYVSEILEKMTYEGRYIPDAMNLILLLVT 349
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG 465
+ D A I+ LA A G F ++H V N P
Sbjct: 350 EKMEDTALEIL--LACPAPRKENLSDFGSFFLQHCVTMNTPA 389
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 91/172 (52%), Gaps = 13/172 (7%)
Query: 154 TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 213
T+ IS +NAL+ + Q S L M +A ++P+ TY +L+ Y GD++
Sbjct: 161 TYDISH--YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAAYCNVGDIEGA 218
Query: 214 KTKIPSLK----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTK 269
+ +K P +E FS +T + DM +AE I+T+M +AG+EP TY
Sbjct: 219 SKILGFMKSKDLPVTEA--VFSALVTGHA--RAGDMENAENIITVMKEAGIEPGPDTYLA 274
Query: 270 LMCGYAKHGDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
L+ YA+ GD+D V++ L + S L++ D L +I A + +G+ +Y+ E+
Sbjct: 275 LLNAYAEKGDIDRVKQTLEKVKKSDIYLMDRDLLQVIFAFSKAGYPQYVSEI 326
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 39/72 (54%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ ++ K+D A+E C +++ P ++L + ++ ++ +Q++ D + GE
Sbjct: 830 LVTVYLEKDDVRAALEASVECYEKYKVLPRIHDVLCKLMEKGESDLIQKVMDFVSHEQGE 889
Query: 608 VNSLYDLMLSFL 619
+ LYDL +FL
Sbjct: 890 MMMLYDLFFAFL 901
>gi|113931508|ref|NP_001039203.1| leucine-rich PPR motif-containing protein, mitochondrial precursor
[Xenopus (Silurana) tropicalis]
gi|123910179|sp|Q28C74.1|LPPRC_XENTR RecName: Full=Leucine-rich PPR motif-containing protein,
mitochondrial; Flags: Precursor
gi|89268766|emb|CAJ83132.1| leucine-rich PPR-motif containing [Xenopus (Silurana) tropicalis]
Length = 1391
Score = 169 bits (427), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 109/146 (74%), Gaps = 6/146 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL D+SHYNALL+VYL NEH FSPT++LAK+E+ ++PNRVTYQ +LI+ YC
Sbjct: 139 ELGAVFDVSHYNALLKVYLQNEHKFSPTEYLAKMEAANVQPNRVTYQ------RLIAAYC 192
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+G+IEGA+KIL FM++K PI+E VFN L+ GH++A DM +A+ IL++M AG+EP +
Sbjct: 193 NEGDIEGASKILGFMKNKDLPITEAVFNTLVTGHARAGDMENAKNILSVMRSAGIEPGPE 252
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLK 221
TY L+ YA+ GD+++IK + +++
Sbjct: 253 TYVALLTAYAEKGDINNIKQTLENVE 278
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 116/222 (52%), Gaps = 23/222 (10%)
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL---AV 308
L M A ++P+ TY +L+ Y GD++ ++L + N D L I A+ V
Sbjct: 169 LAKMEAANVQPNRVTYQRLIAAYCNEGDIEGASKILG----FMKNKD-LPITEAVFNTLV 223
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
+GH D +A NI +M AG+EP +TY L+ YA+ GD+++I++
Sbjct: 224 TGHARAGDMENA----KNIL------SVMRSAGIEPGPETYVALLTAYAEKGDINNIKQT 273
Query: 369 LA---QNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
L +N SL + D + +I +LA +G+ +Y+ +I+ +++ GY DA N L+ +G
Sbjct: 274 LENVEKNEGSLTDRDLMQVIWSLAKAGYPQYVQDIVERMRYDRGYIPDAMNLCLSLMTQG 333
Query: 426 QIDAAYRIVNTLARSA--NINGEQLPVGGFLVRHMVKTNQPG 465
D A+ ++ + + ++ + NG+ L G F +RH V ++P
Sbjct: 334 FEDVAFLVLKSFSAASHDSPNGDSLHHGNFFLRHCVNLDKPA 375
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 99/186 (53%), Gaps = 13/186 (6%)
Query: 141 EGATKILEFMRD--KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
E A +I E +++ F +S +NAL+ + Q S L M A ++P+ TY
Sbjct: 128 EMAHRIWEKLQELGAVFDVSH--YNALLKVYLQNEHKFSPTEYLAKMEAANVQPNRVTYQ 185
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMM 255
+L+ Y GD++ + +K + L + + N L+ + DM +A+ IL++M
Sbjct: 186 RLIAAYCNEGDIEGASKILGFMKNKD---LPITEAVFNTLVTGHARAGDMENAKNILSVM 242
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHG 312
AG+EP +TY L+ YA+ GD++++++ L ++ SL + D + +I +LA +G+
Sbjct: 243 RSAGIEPGPETYVALLTAYAEKGDINNIKQTLENVEKNEGSLTDRDLMQVIWSLAKAGYP 302
Query: 313 EYIDEV 318
+Y+ ++
Sbjct: 303 QYVQDI 308
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ H+ K D A+ET C ++ P ++L R ++ D LQ+ D + GE
Sbjct: 822 LVSVHLEKGDLPAAMETLFTCSKKYNCMPRLHDVLCRLVEKGDTDLLQKAMDHISQERGE 881
Query: 608 VNSLYDLMLSFL 619
+ LYDL+ +FL
Sbjct: 882 MAMLYDLLFAFL 893
>gi|410900902|ref|XP_003963935.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich PPR motif-containing
protein, mitochondrial-like [Takifugu rubripes]
Length = 1409
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 78/142 (54%), Positives = 104/142 (73%), Gaps = 6/142 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+L D+SHYNALL+VYL NE FSPTDFLAK+E+ I+PNRVTYQ +LI+ YC
Sbjct: 167 DLGAQYDVSHYNALLKVYLQNEFKFSPTDFLAKMEAANIQPNRVTYQ------RLIAAYC 220
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
Q+G+IEGA+ IL FM++K PI+E VFN+L+ GH++A D+ SA+ ILT+M AG+EP
Sbjct: 221 QNGDIEGASTILGFMKNKDLPITEAVFNSLVTGHARAGDIESAKNILTVMKGAGIEPGPD 280
Query: 196 TYTKLMCGYAKHGDMDSIKTKI 217
TY L+ YA+ GDM+S K +
Sbjct: 281 TYISLLTAYAEKGDMESFKKTL 302
Score = 103 bits (256), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 115/226 (50%), Gaps = 23/226 (10%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M A ++P+ TY +L+ Y ++GD++ +L + N D L I A+
Sbjct: 192 SPTDFLAKMEAANIQPNRVTYQRLIAAYCQNGDIEGASTILG----FMKNKD-LPITEAV 246
Query: 307 ---AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
V+GH D SA NI +M AG+EP TY L+ YA+ GDM+
Sbjct: 247 FNSLVTGHARAGDIESA----KNIL------TVMKGAGIEPGPDTYISLLTAYAEKGDME 296
Query: 364 SIRRLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH 420
S ++ L SS L++ D++ +I +LA +G +++ E++ +++ GY DA N
Sbjct: 297 SFKKTLEVAESSDFTLMDRDFMQVIFSLAKAGQQQHLPEVVERLRHERGYVPDAMNLCLS 356
Query: 421 LINKGQIDAAYRIVNTLA--RSANINGEQLPVGGFLVRHMVKTNQP 464
LI +G D+A+ I+ T +S N+N + VG F +RH V + P
Sbjct: 357 LITQGLEDSAFYILKTFPTLQSDNLNTDSSNVGNFFLRHCVNMDMP 402
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 9/182 (4%)
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + E +RD +NAL+ + Q S L M A ++P+ TY +L+
Sbjct: 158 AHHVWEKLRDLGAQYDVSHYNALLKVYLQNEFKFSPTDFLAKMEAANIQPNRVTYQRLIA 217
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAG 259
Y ++GD++ T + +K + L + + N L+ + D+ SA+ ILT+M AG
Sbjct: 218 AYCQNGDIEGASTILGFMKNKD---LPITEAVFNSLVTGHARAGDIESAKNILTVMKGAG 274
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYID 316
+EP TY L+ YA+ GDM+S ++ L + SS L++ D++ +I +LA +G +++
Sbjct: 275 IEPGPDTYISLLTAYAEKGDMESFKKTLEVAESSDFTLMDRDFMQVIFSLAKAGQQQHLP 334
Query: 317 EV 318
EV
Sbjct: 335 EV 336
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 540 PRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITD 599
P A + L+ +++ ++ +GA+E C N++ P +++ ++ D LQ+ D
Sbjct: 832 PSANMCSPLVTSYLESKNLSGALEAAMECQNRYNQLPRIHDIIIGLVEKGDTELLQKAMD 891
Query: 600 LSTSIHGEVNSLYDLMLSFL 619
+ GE+ LYDL +FL
Sbjct: 892 FVSQKRGEMTMLYDLFFAFL 911
>gi|387539518|gb|AFJ70386.1| leucine-rich PPR motif-containing protein, mitochondrial precursor
[Macaca mulatta]
Length = 1397
Score = 169 bits (427), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 109/147 (74%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ+LI++ YC G+IE
Sbjct: 161 DVSHYNALLKVYLQNEYKFSPTDFLAKMEDANIQPNRVTYQRLIAS------YCNTGDIE 214
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M +AG+EP TY L+
Sbjct: 215 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMQNAENILTVMREAGIEPGPDTYLALL 274
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL L
Sbjct: 275 NAYAEKGDIDHVKQTLEKVE-KSELHL 300
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 17/221 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 180 SPTDFLAKMEDANIQPNRVTYQRLIASYCNTGDIEGASKILGFMKTK--DLPVTEAVFSA 237
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 238 LVTGHARAGDMQNA----ENIL------TVMREAGIEPGPDTYLALLNAYAEKGDIDHVK 287
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D II + + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 288 QTLEKVEKSELHLMDRDLFQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVT 347
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +I+ LA + G F +RH V N P
Sbjct: 348 EKLEDVALQIL--LACPISKEDGISDFGSFFLRHCVTMNTP 386
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M A ++P+ TY +L+ Y GD++ + +K
Sbjct: 165 YNALLKVYLQNEYKFSPTDFLAKMEDANIQPNRVTYQRLIASYCNTGDIEGASKILGFMK 224
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 225 TKDLPVTEA--VFSALVTGHA--RAGDMQNAENILTVMREAGIEPGPDTYLALLNAYAEK 280
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV-SAIVC 323
GD+D V++ L + S L++ D II + + +G+ +Y+ E+ + C
Sbjct: 281 GDIDHVKQTLEKVEKSELHLMDRDLFQIIFSFSKAGYPQYVSEILEKVTC 330
>gi|380808588|gb|AFE76169.1| leucine-rich PPR motif-containing protein, mitochondrial precursor
[Macaca mulatta]
gi|384944618|gb|AFI35914.1| leucine-rich PPR motif-containing protein, mitochondrial precursor
[Macaca mulatta]
Length = 1397
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 109/147 (74%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ+LI++ YC G+IE
Sbjct: 161 DVSHYNALLKVYLQNEYKFSPTDFLAKMEDANIQPNRVTYQRLIAS------YCNTGDIE 214
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M +AG+EP TY L+
Sbjct: 215 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMQNAENILTVMREAGIEPGPDTYLALL 274
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL L
Sbjct: 275 NAYAEKGDIDHVKQTLEKVE-KSELHL 300
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 17/221 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 180 SPTDFLAKMEDANIQPNRVTYQRLIASYCNTGDIEGASKILGFMKTK--DLPVTEAVFSA 237
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 238 LVTGHARAGDMQNA----ENIL------TVMREAGIEPGPDTYLALLNAYAEKGDIDHVK 287
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D II + + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 288 QTLEKVEKSELHLMDRDLFQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVT 347
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +I+ LA + G F +RH V N P
Sbjct: 348 EKLEDVALQIL--LACPISKEDGISDFGSFFLRHCVTMNTP 386
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M A ++P+ TY +L+ Y GD++ + +K
Sbjct: 165 YNALLKVYLQNEYKFSPTDFLAKMEDANIQPNRVTYQRLIASYCNTGDIEGASKILGFMK 224
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 225 TKDLPVTEA--VFSALVTGHA--RAGDMQNAENILTVMREAGIEPGPDTYLALLNAYAEK 280
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV-SAIVC 323
GD+D V++ L + S L++ D II + + +G+ +Y+ E+ + C
Sbjct: 281 GDIDHVKQTLEKVEKSELHLMDRDLFQIIFSFSKAGYPQYVSEILEKVTC 330
>gi|291228151|ref|XP_002734047.1| PREDICTED: leucine-rich PPR-motif containing-like [Saccoglossus
kowalevskii]
Length = 1067
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 108/148 (72%), Gaps = 6/148 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL + + +HYNA+L+VYL N H S ++FL +ES G+EPNRVTYQ ++I YC
Sbjct: 177 ELGIKRNTNHYNAMLKVYLQNNHQISLSEFLENMESSGVEPNRVTYQ------RIIGLYC 230
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
Q+G+I+GA K+LEFM+ K PI++GVFN+LI GH++A DMA+AEG+LT+M LEP+
Sbjct: 231 QEGDIQGAGKVLEFMKKKDMPITDGVFNSLITGHARAGDMANAEGMLTIMRNVSLEPTVD 290
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
TYT LMC YA+ GD+++I+ + L+ +
Sbjct: 291 TYTSLMCAYAEKGDIENIREVLKQLRSE 318
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 113/228 (49%), Gaps = 31/228 (13%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALA 307
L M +G+EP+ TY +++ Y + GD+ V + + + +G + +I
Sbjct: 206 FLENMESSGVEPNRVTYQRIIGLYCQEGDIQGAGKVLEFMKKKDMPITDGVFNSLI---- 261
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEG--PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
+GH D +A EG +M LEP+ TYT LMC YA+ GD+++I
Sbjct: 262 -TGHARAGDMANA------------EGMLTIMRNVSLEPTVDTYTSLMCAYAEKGDIENI 308
Query: 366 RRLLAQ---NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLI 422
R +L Q + L N + + ++H+L SGH E++ EI+S +Q G Y+ DA N L+
Sbjct: 309 REVLKQLRSEDTKLSNKNLMLVLHSLVTSGHEEHVSEILSHMQFGTRYAPDAINLCLTLL 368
Query: 423 NKGQIDAAYRIVNTLAR------SANINGEQLPVGGFLVRHMVKTNQP 464
+G+ D A I+ T + + GE+ G F ++H+V N+P
Sbjct: 369 TEGRDDVAMEILKTFPKIRPEVETMLAAGEEFQQGSFYIKHLVLLNRP 416
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 99/185 (53%), Gaps = 17/185 (9%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NA++ + Q N S L M +G+EP+ TY +++ Y + GD+ + +K
Sbjct: 187 YNAMLKVYLQNNHQISLSEFLENMESSGVEPNRVTYQRIIGLYCQEGDIQGAGKVLEFMK 246
Query: 222 PQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ + + + N LI + DMA+AEG+LT+M LEP+ TYT LMC YA+ G
Sbjct: 247 KKD---MPITDGVFNSLITGHARAGDMANAEGMLTIMRNVSLEPTVDTYTSLMCAYAEKG 303
Query: 279 DMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF--------VNI 327
D++++R +L Q + L N + + ++H+L SGH E++ E+ + + F +N+
Sbjct: 304 DIENIREVLKQLRSEDTKLSNKNLMLVLHSLVTSGHEEHVSEILSHMQFGTRYAPDAINL 363
Query: 328 CFHWL 332
C L
Sbjct: 364 CLTLL 368
>gi|291386863|ref|XP_002709946.1| PREDICTED: leucine-rich PPR motif-containing protein [Oryctolagus
cuniculus]
Length = 1395
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/147 (53%), Positives = 109/147 (74%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 162 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIAAYCNVGDIE 215
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M +AG+EP TY L+
Sbjct: 216 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMKEAGIEPGPDTYLALL 275
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +S+L+L
Sbjct: 276 NAYAEKGDIDRVKQTLEKVE-KSDLYL 301
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 17/221 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 181 SPTDFLAKMEEANIQPNRVTYQRLIAAYCNVGDIEGASKILGFMKTK--DLPVTEAVFSA 238
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 239 LVTGHARAGDMENA----ENIL------TVMKEAGIEPGPDTYLALLNAYAEKGDIDRVK 288
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ KI Y DA N I L+
Sbjct: 289 QTLEKVEKSDLYLMDRDLLQIIFSFSKAGYPQYVSEILEKITYERRYIPDAMNLILLLVT 348
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +I+ LA + G F ++H V + P
Sbjct: 349 EKLEDTALQIL--LACPISKEDNLTDFGSFFLKHCVTVDTP 387
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 166 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAAYCNVGDIEGASKILGFMK 225
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 226 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMKEAGIEPGPDTYLALLNAYAEK 281
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+
Sbjct: 282 GDIDRVKQTLEKVEKSDLYLMDRDLLQIIFSFSKAGYPQYVSEI 325
>gi|297265903|ref|XP_001107298.2| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Macaca mulatta]
Length = 1373
Score = 168 bits (426), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 109/147 (74%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ+LI++ YC G+IE
Sbjct: 135 DVSHYNALLKVYLQNEYKFSPTDFLAKMEDANIQPNRVTYQRLIAS------YCNTGDIE 188
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M +AG+EP TY L+
Sbjct: 189 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMQNAENILTVMREAGIEPGPDTYLALL 248
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL L
Sbjct: 249 NAYAEKGDIDHVKQTLEKVE-KSELHL 274
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 17/221 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 154 SPTDFLAKMEDANIQPNRVTYQRLIASYCNTGDIEGASKILGFMKTK--DLPVTEAVFSA 211
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 212 LVTGHARAGDMQNA----ENIL------TVMREAGIEPGPDTYLALLNAYAEKGDIDHVK 261
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D II + + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 262 QTLEKVEKSELHLMDRDLFQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVT 321
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +I+ LA + G F +RH V N P
Sbjct: 322 EKLEDVALQIL--LACPISKEDGISDFGSFFLRHCVTMNTP 360
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 12/170 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M A ++P+ TY +L+ Y GD++ + +K
Sbjct: 139 YNALLKVYLQNEYKFSPTDFLAKMEDANIQPNRVTYQRLIASYCNTGDIEGASKILGFMK 198
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 199 TKDLPVTEA--VFSALVTGHA--RAGDMQNAENILTVMREAGIEPGPDTYLALLNAYAEK 254
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV-SAIVC 323
GD+D V++ L + S L++ D II + + +G+ +Y+ E+ + C
Sbjct: 255 GDIDHVKQTLEKVEKSELHLMDRDLFQIIFSFSKAGYPQYVSEILEKVTC 304
>gi|410954707|ref|XP_003984003.1| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Felis catus]
Length = 1645
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 109/147 (74%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 238 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIAAYCNVGDIE 291
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K PI+E VF+AL+ GH++A D+ +AE ILT+M +AG+EP TY L+
Sbjct: 292 GASKILGFMKTKDLPITEAVFSALVTGHARAGDIENAENILTVMREAGIEPGPDTYLALL 351
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + +K +S+L+L
Sbjct: 352 NAYAEKGDIDHVKQTLEKVK-KSDLYL 377
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 109/227 (48%), Gaps = 27/227 (11%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + L I A+
Sbjct: 257 SPTDFLAKMEEANIQPNRVTYQRLIAAYCNVGDIEGASKILG-----FMKTKDLPITEAV 311
Query: 307 ---AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D
Sbjct: 312 FSALVTGHARAGDIENA----ENIL------TVMREAGIEPGPDTYLALLNAYAEKGDID 361
Query: 364 SIRRLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH 420
+++ L + S L++ D L II + + +G+ +Y+ EI+ KI Y DA N I
Sbjct: 362 HVKQTLEKVKKSDLYLMDRDLLQIIFSFSKAGYSQYVPEILEKITYERRYIPDAMNLILL 421
Query: 421 LINKGQIDAAYRIV--NTLARSANINGEQLPVGGFLVRHMVKTNQPG 465
L+ + D A++I+ ++R N+N G F +RH V N P
Sbjct: 422 LVTEKLEDTAFQILLACPVSREDNLND----FGSFFLRHCVTMNTPA 464
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 9/163 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ +KI
Sbjct: 242 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAAYCNVGDIEG-ASKILGFM 300
Query: 222 PQSELFL---CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+L + FS +T + D+ +AE ILT+M +AG+EP TY L+ YA+ G
Sbjct: 301 KTKDLPITEAVFSALVTGHA--RAGDIENAENILTVMREAGIEPGPDTYLALLNAYAEKG 358
Query: 279 DMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
D+D V++ L + S L++ D L II + + +G+ +Y+ E+
Sbjct: 359 DIDHVKQTLEKVKKSDLYLMDRDLLQIIFSFSKAGYSQYVPEI 401
>gi|402890709|ref|XP_003908620.1| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Papio anubis]
Length = 1397
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 109/147 (74%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ+LI++ YC G+IE
Sbjct: 161 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAS------YCNMGDIE 214
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M +AG+EP TY L+
Sbjct: 215 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMREAGIEPGPDTYLALL 274
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL L
Sbjct: 275 NAYAEKGDIDHVKQTLEKVE-KSELHL 300
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 107/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 180 SPTDFLAKMEEANIQPNRVTYQRLIASYCNMGDIEGASKILGFMKTK--DLPVTEAVFSA 237
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 238 LVTGHARAGDMENA----ENIL------TVMREAGIEPGPDTYLALLNAYAEKGDIDHVK 287
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D II + + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 288 QTLEKVEKSELHLMDRDLFQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVT 347
Query: 424 KGQIDAAYRIVNT--LARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +I+ + +++ I+ G F +RH V N P
Sbjct: 348 EKLEDVALQILLSCPISKEDGISD----FGSFFLRHCVTMNTP 386
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 165 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNMGDIEGASKILGFMK 224
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 225 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMREAGIEPGPDTYLALLNAYAEK 280
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV-SAIVC 323
GD+D V++ L + S L++ D II + + +G+ +Y+ E+ + C
Sbjct: 281 GDIDHVKQTLEKVEKSELHLMDRDLFQIIFSFSKAGYPQYVSEILEKVTC 330
>gi|338714040|ref|XP_001498919.2| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Equus caballus]
Length = 1503
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/147 (53%), Positives = 109/147 (74%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 271 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIAAYCNVGDIE 324
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M +AG+EP TY L+
Sbjct: 325 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMKEAGIEPGPDTYLALL 384
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +S+L+L
Sbjct: 385 NAYAEKGDIDHVKQTLEKVE-KSDLYL 410
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 290 SPTDFLAKMEEANIQPNRVTYQRLIAAYCNVGDIEGASKILGFMKTK--DLPVTEAVFSA 347
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 348 LVTGHARAGDMENA----ENIL------TVMKEAGIEPGPDTYLALLNAYAEKGDIDHVK 397
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D II + + +G+ +Y+ EI+ KI Y DA N I L+
Sbjct: 398 QTLEKVEKSDLYLMDRDLFQIIFSFSKAGYPQYVSEILEKITYERRYIPDAMNLILLLVT 457
Query: 424 KGQIDAAYRIV--NTLARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +I+ ++R +N G F +RH V + P
Sbjct: 458 EKLEDTALQILLACPISREDGLND----FGSFFLRHCVTMDTP 496
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 275 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAAYCNVGDIEGASKILGFMK 334
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 335 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMKEAGIEPGPDTYLALLNAYAEK 390
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V++ L + S L++ D II + + +G+ +Y+ E+
Sbjct: 391 GDIDHVKQTLEKVEKSDLYLMDRDLFQIIFSFSKAGYPQYVSEI 434
>gi|56605990|ref|NP_001008519.1| leucine-rich PPR motif-containing protein, mitochondrial precursor
[Rattus norvegicus]
gi|81871846|sp|Q5SGE0.1|LPPRC_RAT RecName: Full=Leucine-rich PPR motif-containing protein,
mitochondrial; AltName: Full=130 kDa leucine-rich
protein; Short=LRP 130; AltName: Full=Leucine rich
protein 157; Short=rLRP157; Flags: Precursor
gi|34539486|gb|AAQ74626.1| leucine rich protein 157 precursor [Rattus norvegicus]
Length = 1392
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 111/161 (68%), Gaps = 10/161 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 160 DVSHYNALLKVYLQNEYRFSPTDFLAKMEGANIQPNRVTYQ------RLIAAYCSVGDIE 213
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ + PI+E VF+AL+ GH++A DM SAE ILT+M QAG+EP TY L+
Sbjct: 214 GASKILGFMKTRDLPITEAVFSALVTGHARAGDMESAENILTVMKQAGIEPGPDTYLALL 273
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
+A+ GD+D +K + ++ F+ F L I+VS
Sbjct: 274 NAHAEKGDIDHVKQILEKVEKSDHYFMDRDF----LQIIVS 310
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 179 SPTDFLAKMEGANIQPNRVTYQRLIAAYCSVGDIEGASKILGFMKTR--DLPITEAVFSA 236
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D SA NI +M QAG+EP TY L+ +A+ GD+D ++
Sbjct: 237 LVTGHARAGDMESA----ENIL------TVMKQAGIEPGPDTYLALLNAHAEKGDIDHVK 286
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
++L + S ++ D+L II + + +G+ +Y+ EI+ KI DA N I L+
Sbjct: 287 QILEKVEKSDHYFMDRDFLQIIVSFSKAGYPQYVSEILEKITYERRSIPDAMNLILLLVT 346
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG 465
+ D A++++ L + + G F +RH V + P
Sbjct: 347 EKLEDTAFQVLLALPLARDETSSSF--GSFFLRHCVTMDTPA 386
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M A ++P+ TY +L+ Y GD++ + +K
Sbjct: 164 YNALLKVYLQNEYRFSPTDFLAKMEGANIQPNRVTYQRLIAAYCSVGDIEGASKILGFMK 223
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM SAE ILT+M QAG+EP TY L+ +A+
Sbjct: 224 TRDLPITEA--VFSALVTGHA--RAGDMESAENILTVMKQAGIEPGPDTYLALLNAHAEK 279
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V+++L + S ++ D+L II + + +G+ +Y+ E+
Sbjct: 280 GDIDHVKQILEKVEKSDHYFMDRDFLQIIVSFSKAGYPQYVSEI 323
Score = 42.7 bits (99), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
A ++E +RD+ FPI F L+ GH + ++ IL +M + G++P +TY
Sbjct: 422 AKAVMEALRDEGFPIRTHYFWPLLVGHQKTKNVQGIIDILKIMKEMGVDPDQETY 476
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ H+ K+D A+E C +++ P ++L + I+ + +Q+ D + GE
Sbjct: 827 LVTVHLEKDDLPAALEASIACHEKYKVLPRIHDVLCKLIEKGETDLIQKAMDFVSQEQGE 886
Query: 608 VNSLYDLMLSFL 619
++ LYDL +FL
Sbjct: 887 MSMLYDLFFAFL 898
>gi|432903116|ref|XP_004077099.1| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like [Oryzias latipes]
Length = 1422
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 102/139 (73%), Gaps = 6/139 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL P D+SHYNALL+VYL N+ FSPTDFLAK+E+ ++PNRVTYQ +LI+ YC
Sbjct: 169 ELGAPYDVSHYNALLKVYLQNDFRFSPTDFLAKMEAANVQPNRVTYQ------RLIAAYC 222
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
Q G+IEGA+ IL FM+ K PI+E VF++L+ GH++A DM SA+ IL +M AG+EP+
Sbjct: 223 QKGDIEGASTILGFMKSKDLPITEAVFSSLVTGHARAGDMESAKNILPVMRGAGIEPTPD 282
Query: 196 TYTKLMCGYAKHGDMDSIK 214
TY L+ YA+ GD+D +K
Sbjct: 283 TYVSLLTAYAEKGDLDGLK 301
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 130/283 (45%), Gaps = 29/283 (10%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M A ++P+ TY +L+ Y + GD++ +L + L I A+
Sbjct: 194 SPTDFLAKMEAANVQPNRVTYQRLIAAYCQKGDIEGASTILG-----FMKSKDLPITEAV 248
Query: 307 ---AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
V+GH D SA NI P+M AG+EP+ TY L+ YA+ GD+D
Sbjct: 249 FSSLVTGHARAGDMESA----KNIL------PVMRGAGIEPTPDTYVSLLTAYAEKGDLD 298
Query: 364 SIRRLLAQNGS---SLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH 420
++ L S SL++ D + +I LA +GH E I E++ +++ GY DA N
Sbjct: 299 GLKMTLEAAESADCSLMDRDIMQVIFTLAKAGHQELIPEMVERLRHERGYVPDAMNLCLS 358
Query: 421 LINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLI 480
LI +GQ D A+ I+ T + + E +G F +RH + + + I+H
Sbjct: 359 LITQGQEDTAFSILKTFPSLQSDSNETSNLGNFFLRHCINMDI--------SLEKIFHYC 410
Query: 481 NKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPI 523
+ Q + T A S ++ +++ L+R + + N PI
Sbjct: 411 KELQELNLHSAPLTFALSCSLEAKKIGSSLELMRLLKEQNLPI 453
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 11/185 (5%)
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A ++ E +++ P +NAL+ + Q + S L M A ++P+ TY +L
Sbjct: 158 ELAHRVWEKLQELGAPYDVSHYNALLKVYLQNDFRFSPTDFLAKMEAANVQPNRVTYQRL 217
Query: 201 MCGYAKHGDMDSIKTKIPSLK----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
+ Y + GD++ T + +K P +E FS +T + DM SA+ IL +M
Sbjct: 218 IAAYCQKGDIEGASTILGFMKSKDLPITEA--VFSSLVTGHA--RAGDMESAKNILPVMR 273
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS---SLVNGDYLDIIHALAVSGHGE 313
AG+EP+ TY L+ YA+ GD+D ++ L + S SL++ D + +I LA +GH E
Sbjct: 274 GAGIEPTPDTYVSLLTAYAEKGDLDGLKMTLEAAESADCSLMDRDIMQVIFTLAKAGHQE 333
Query: 314 YIDEV 318
I E+
Sbjct: 334 LIPEM 338
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 540 PRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITD 599
P A + ++ AH+ +D GA+E C + P +++ ++ D LQ+ D
Sbjct: 845 PTANLCSPIVTAHLNSKDVAGALEATIECQKLYNQLPRIHDIIVALVEKGDTEVLQKAMD 904
Query: 600 LSTSIHGEVNSLYDLMLSFL 619
+ GE+ LYDL +FL
Sbjct: 905 FISQERGEMTMLYDLFFAFL 924
>gi|73970116|ref|XP_531800.2| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Canis lupus familiaris]
Length = 1393
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/147 (53%), Positives = 109/147 (74%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 161 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIAAYCNAGDIE 214
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A D+ +AE ILT+M +AG+EP TY L+
Sbjct: 215 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDIENAENILTVMKEAGIEPGPDTYLALL 274
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +S+L+L
Sbjct: 275 NAYAEKGDIDHVKQTLEKVE-KSDLYL 300
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 17/222 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 180 SPTDFLAKMEEANIQPNRVTYQRLIAAYCNAGDIEGASKILGFMKTK--DLPVTEAVFSA 237
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 238 LVTGHARAGDIENA----ENIL------TVMKEAGIEPGPDTYLALLNAYAEKGDIDHVK 287
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ KI Y DA N I L+
Sbjct: 288 QTLEKVEKSDLYLMDRDLLQIIFSFSKAGYSQYVPEILEKITYERRYIPDAMNLILLLVT 347
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG 465
+ D A++I+ LA +A+ G F +RH V N P
Sbjct: 348 EKLEDTAFQIL--LACAASREDHLSDFGSFFLRHCVTMNTPA 387
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 165 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAAYCNAGDIEGASKILGFMK 224
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + D+ +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 225 TKDLPVTEA--VFSALVTGHA--RAGDIENAENILTVMKEAGIEPGPDTYLALLNAYAEK 280
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+
Sbjct: 281 GDIDHVKQTLEKVEKSDLYLMDRDLLQIIFSFSKAGYSQYVPEI 324
>gi|397504200|ref|XP_003822691.1| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Pan paniscus]
Length = 1395
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 107/147 (72%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 162 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIASYCNVGDIE 215
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M AG+EP TY L+
Sbjct: 216 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALL 275
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL L
Sbjct: 276 NAYAEKGDIDHVKQTLEKVE-KSELHL 301
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 181 SPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTK--DLPVTEAVFSA 238
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M AG+EP TY L+ YA+ GD+D ++
Sbjct: 239 LVTGHARAGDMENA----ENIL------TVMRDAGIEPGPDTYLALLNAYAEKGDIDHVK 288
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 289 QTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVT 348
Query: 424 KGQIDAAYRIVNTLARSANINGEQLP--VGGFLVRHMVKTNQP 464
+ D A +I+ + ++ E P G F ++H V N P
Sbjct: 349 EKLEDVALQIL----LACPVSKEDGPSVFGSFFLQHCVTMNTP 387
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 166 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMK 225
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M AG+EP TY L+ YA+
Sbjct: 226 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEK 281
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV-SAIVC 323
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+ + C
Sbjct: 282 GDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTC 331
>gi|34532000|dbj|BAC86287.1| unnamed protein product [Homo sapiens]
Length = 1394
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 108/147 (73%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ+LI++ YC G+IE
Sbjct: 161 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAS------YCNVGDIE 214
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M AG+EP TY L+
Sbjct: 215 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALL 274
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL L
Sbjct: 275 NAYAEKGDIDHVKQTLEKVE-KSELHL 300
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 180 SPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTK--DLPVTEAVFSA 237
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M AG+EP TY L+ YA+ GD+D ++
Sbjct: 238 LVTGHARAGDMENA----ENIL------TVMRDAGIEPGPDTYLALLNAYAEKGDIDHVK 287
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 288 QTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVT 347
Query: 424 KGQIDAAYRIVNTLARSANINGEQLP--VGGFLVRHMVKTNQP 464
+ D A +I+ + ++ E P G F ++H V N P
Sbjct: 348 EKLEDVALQIL----LACPVSKEDGPSVFGSFFLQHCVTMNTP 386
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 165 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMK 224
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M AG+EP TY L+ YA+
Sbjct: 225 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEK 280
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV-SAIVC 323
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+ + C
Sbjct: 281 GDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTC 330
>gi|114577188|ref|XP_001143797.1| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
isoform 1 [Pan troglodytes]
gi|410221914|gb|JAA08176.1| leucine-rich PPR-motif containing [Pan troglodytes]
Length = 1394
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 107/147 (72%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 161 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIASYCNVGDIE 214
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M AG+EP TY L+
Sbjct: 215 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALL 274
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL L
Sbjct: 275 NAYAEKGDIDHVKQTLEKVE-KSELHL 300
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 180 SPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTK--DLPVTEAVFSA 237
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M AG+EP TY L+ YA+ GD+D ++
Sbjct: 238 LVTGHARAGDMENA----ENIL------TVMRDAGIEPGPDTYLALLNAYAEKGDIDHVK 287
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 288 QTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVT 347
Query: 424 KGQIDAAYRIVNTLARSANINGEQLP--VGGFLVRHMVKTNQP 464
+ D A +I+ + ++ E P G F ++H V N P
Sbjct: 348 EKLEDVALQIL----LACPVSKEDGPSVFGSFFLQHCVTMNTP 386
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 165 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMK 224
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M AG+EP TY L+ YA+
Sbjct: 225 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEK 280
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV-SAIVC 323
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+ + C
Sbjct: 281 GDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTC 330
>gi|410267742|gb|JAA21837.1| leucine-rich PPR-motif containing [Pan troglodytes]
Length = 1394
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 107/147 (72%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 161 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIASYCNVGDIE 214
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M AG+EP TY L+
Sbjct: 215 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALL 274
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL L
Sbjct: 275 NAYAEKGDIDHVKQTLEKVE-KSELHL 300
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 180 SPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTK--DLPVTEAVFSA 237
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M AG+EP TY L+ YA+ GD+D ++
Sbjct: 238 LVTGHARAGDMENA----ENIL------TVMRDAGIEPGPDTYLALLNAYAEKGDIDHVK 287
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 288 QTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVT 347
Query: 424 KGQIDAAYRIVNTLARSANINGEQLP--VGGFLVRHMVKTNQP 464
+ D A +I+ + ++ E P G F ++H V N P
Sbjct: 348 EKLEDVALQIL----LACPVSKEDGPSVFGSFFLQHCVTMNTP 386
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 165 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMK 224
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M AG+EP TY L+ YA+
Sbjct: 225 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEK 280
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV-SAIVC 323
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+ + C
Sbjct: 281 GDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTC 330
>gi|410336895|gb|JAA37394.1| leucine-rich PPR-motif containing [Pan troglodytes]
Length = 1394
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 107/147 (72%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 161 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIASYCNVGDIE 214
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M AG+EP TY L+
Sbjct: 215 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALL 274
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL L
Sbjct: 275 NAYAEKGDIDHVKQTLEKVE-KSELHL 300
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 180 SPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTK--DLPVTEAVFSA 237
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M AG+EP TY L+ YA+ GD+D ++
Sbjct: 238 LVTGHARAGDMENA----ENIL------TVMRDAGIEPGPDTYLALLNAYAEKGDIDHVK 287
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 288 QTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVT 347
Query: 424 KGQIDAAYRIVNTLARSANINGEQLP--VGGFLVRHMVKTNQP 464
+ D A +I+ + ++ E P G F ++H V N P
Sbjct: 348 EKLEDVALQIL----LACPVSKEDGPSVFGSFFLQHCVTMNTP 386
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 165 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMK 224
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M AG+EP TY L+ YA+
Sbjct: 225 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEK 280
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV-SAIVC 323
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+ + C
Sbjct: 281 GDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTC 330
>gi|158261055|dbj|BAF82705.1| unnamed protein product [Homo sapiens]
Length = 1394
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 107/147 (72%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 161 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIASYCNVGDIE 214
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M AG+EP TY L+
Sbjct: 215 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALL 274
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL L
Sbjct: 275 NAYAEKGDIDHVKQTLEKVE-KSELHL 300
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 180 SPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTK--DLPVTEAVFSA 237
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M AG+EP TY L+ YA+ GD+D ++
Sbjct: 238 LVTGHARAGDMENA----ENIL------TVMRDAGIEPGPDTYLALLNAYAEKGDIDHVK 287
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 288 QTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVT 347
Query: 424 KGQIDAAYRIVNTLARSANINGEQLP--VGGFLVRHMVKTNQP 464
+ D A +I+ + ++ E P G F ++H V N P
Sbjct: 348 EKLEDVALQIL----LACPVSKEDGPSVFGSFFLQHCVTMNTP 386
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 165 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMK 224
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M AG+EP TY L+ YA+
Sbjct: 225 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEK 280
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV-SAIVC 323
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+ + C
Sbjct: 281 GDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTC 330
>gi|31621305|ref|NP_573566.2| leucine-rich PPR motif-containing protein, mitochondrial precursor
[Homo sapiens]
gi|156632706|sp|P42704.3|LPPRC_HUMAN RecName: Full=Leucine-rich PPR motif-containing protein,
mitochondrial; AltName: Full=130 kDa leucine-rich
protein; Short=LRP 130; AltName: Full=GP130; Flags:
Precursor
gi|31074371|gb|AAP41922.1| leucine-rich PPR motif-containing protein [Homo sapiens]
gi|54887383|gb|AAH50311.1| Leucine-rich PPR-motif containing [Homo sapiens]
gi|119620689|gb|EAX00284.1| leucine-rich PPR-motif containing [Homo sapiens]
gi|120659796|gb|AAI30286.1| Leucine-rich PPR-motif containing [Homo sapiens]
gi|311347898|gb|ADP90894.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347900|gb|ADP90895.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347902|gb|ADP90896.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347904|gb|ADP90897.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347906|gb|ADP90898.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347908|gb|ADP90899.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347910|gb|ADP90900.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347912|gb|ADP90901.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347914|gb|ADP90902.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347916|gb|ADP90903.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347918|gb|ADP90904.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347920|gb|ADP90905.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347922|gb|ADP90906.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347924|gb|ADP90907.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347926|gb|ADP90908.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347928|gb|ADP90909.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347930|gb|ADP90910.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347932|gb|ADP90911.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347934|gb|ADP90912.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347936|gb|ADP90913.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347938|gb|ADP90914.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347940|gb|ADP90915.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347942|gb|ADP90916.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347944|gb|ADP90917.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347946|gb|ADP90918.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347948|gb|ADP90919.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347950|gb|ADP90920.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347952|gb|ADP90921.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347954|gb|ADP90922.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347956|gb|ADP90923.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347958|gb|ADP90924.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347960|gb|ADP90925.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347962|gb|ADP90926.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347964|gb|ADP90927.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347966|gb|ADP90928.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347968|gb|ADP90929.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347970|gb|ADP90930.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347972|gb|ADP90931.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347974|gb|ADP90932.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
gi|311347976|gb|ADP90933.1| mitochondrial leucine-rich PPR motif-containing protein [Homo
sapiens]
Length = 1394
Score = 167 bits (423), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 107/147 (72%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 161 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIASYCNVGDIE 214
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M AG+EP TY L+
Sbjct: 215 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALL 274
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL L
Sbjct: 275 NAYAEKGDIDHVKQTLEKVE-KSELHL 300
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 180 SPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTK--DLPVTEAVFSA 237
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M AG+EP TY L+ YA+ GD+D ++
Sbjct: 238 LVTGHARAGDMENA----ENIL------TVMRDAGIEPGPDTYLALLNAYAEKGDIDHVK 287
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 288 QTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVT 347
Query: 424 KGQIDAAYRIVNTLARSANINGEQLP--VGGFLVRHMVKTNQP 464
+ D A +I+ + ++ E P G F ++H V N P
Sbjct: 348 EKLEDVALQIL----LACPVSKEDGPSVFGSFFLQHCVTMNTP 386
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 165 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMK 224
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M AG+EP TY L+ YA+
Sbjct: 225 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEK 280
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV-SAIVC 323
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+ + C
Sbjct: 281 GDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTC 330
>gi|194389522|dbj|BAG61722.1| unnamed protein product [Homo sapiens]
Length = 1087
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 107/147 (72%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 61 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIASYCNVGDIE 114
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M AG+EP TY L+
Sbjct: 115 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALL 174
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL L
Sbjct: 175 NAYAEKGDIDHVKQTLEKVE-KSELHL 200
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 80 SPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTK--DLPVTEAVFSA 137
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M AG+EP TY L+ YA+ GD+D ++
Sbjct: 138 LVTGHARAGDMENA----ENIL------TVMRDAGIEPGPDTYLALLNAYAEKGDIDHVK 187
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 188 QTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVT 247
Query: 424 KGQIDAAYRIVNTLARSANINGEQLP--VGGFLVRHMVKTNQP 464
+ D A +I+ + ++ E P G F ++H V N P
Sbjct: 248 EKLEDVALQIL----LACPVSKEDGPSVFGSFFLQHCVTMNTP 286
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 65 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMK 124
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M AG+EP TY L+ YA+
Sbjct: 125 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEK 180
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV-SAIVC 323
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+ + C
Sbjct: 181 GDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTC 230
>gi|301753214|ref|XP_002912482.1| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like [Ailuropoda melanoleuca]
Length = 1435
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/147 (53%), Positives = 109/147 (74%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 202 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIAAYCNMGDIE 255
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A D+ +AE ILT+M +AG+EP TY L+
Sbjct: 256 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDIENAENILTVMKEAGIEPGPDTYLTLL 315
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +S+L+L
Sbjct: 316 NAYAEKGDIDRVKQTLEKVE-KSDLYL 341
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 17/222 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 221 SPTDFLAKMEEANIQPNRVTYQRLIAAYCNMGDIEGASKILGFMKTK--DLPVTEAVFSA 278
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 279 LVTGHARAGDIENA----ENIL------TVMKEAGIEPGPDTYLTLLNAYAEKGDIDRVK 328
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ KI Y DA N I L+
Sbjct: 329 QTLEKVEKSDLYLMDRDLLQIIFSFSKAGYSQYVPEILEKITYERRYIPDAMNLILLLVT 388
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG 465
+ D A++I+ LA + GF ++H V N P
Sbjct: 389 EKLEDTAFQIL--LACPVSREDGLSDFVGFFLQHCVTMNTPA 428
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 206 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAAYCNMGDIEGASKILGFMK 265
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + D+ +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 266 TKDLPVTEA--VFSALVTGHA--RAGDIENAENILTVMKEAGIEPGPDTYLTLLNAYAEK 321
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+
Sbjct: 322 GDIDRVKQTLEKVEKSDLYLMDRDLLQIIFSFSKAGYSQYVPEI 365
>gi|431912725|gb|ELK14743.1| Leucine-rich PPR motif-containing protein, mitochondrial [Pteropus
alecto]
Length = 1391
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/153 (51%), Positives = 111/153 (72%), Gaps = 7/153 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+L D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC
Sbjct: 155 KLGTTYDVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIAAYC 208
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G+IEGA+KIL FM+ K P++E VF+AL+ GH+++ DM +AE ILT+M +AG+EP
Sbjct: 209 NMGDIEGASKILGFMKTKDLPVTEAVFSALVTGHARSGDMENAENILTVMKEAGIEPGPD 268
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
TY L+ YA+ GD+D +K + ++ +S+L+L
Sbjct: 269 TYLALLNAYAEKGDIDHVKQTLEKVE-KSDLYL 300
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 180 SPTDFLAKMEEANIQPNRVTYQRLIAAYCNMGDIEGASKILGFMKTK--DLPVTEAVFSA 237
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 238 LVTGHARSGDMENA----ENIL------TVMKEAGIEPGPDTYLALLNAYAEKGDIDHVK 287
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ KI Y DA N I L+
Sbjct: 288 QTLEKVEKSDLYLMDRDLLQIIFSFSKAGYPQYVSEILEKIAYERRYIPDAMNLILLLVT 347
Query: 424 KGQIDAAYRIV--NTLARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +++ ++R ++ G F +RH V N P
Sbjct: 348 EKLEDTALQVLLACPISREDGLSD----FGSFFLRHCVTMNTP 386
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 89/170 (52%), Gaps = 11/170 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 165 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAAYCNMGDIEGASKILGFMK 224
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T S DM +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 225 TKDLPVTEA--VFSALVTGHA--RSGDMENAENILTVMKEAGIEPGPDTYLALLNAYAEK 280
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEVSAIVCF 324
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+ + +
Sbjct: 281 GDIDHVKQTLEKVEKSDLYLMDRDLLQIIFSFSKAGYPQYVSEILEKIAY 330
>gi|395508129|ref|XP_003758366.1| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Sarcophilus harrisii]
Length = 1400
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 107/161 (66%), Gaps = 11/161 (6%)
Query: 58 SLGPGNLPCEDPFSVHT-----GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ 112
SL P P E VH EL V DISHYNALL+VYL NEH FSPTDFLAK+E
Sbjct: 151 SLLPELKPSERTEFVHRIWDKLQELGVTYDISHYNALLKVYLQNEHEFSPTDFLAKMEEA 210
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
I+PNRVTYQ +LI+ YC G+IEGA+KIL FM+ K P++E VF+ LI GH++
Sbjct: 211 NIQPNRVTYQ------RLIAAYCNKGDIEGASKILGFMKTKNIPVTEIVFSTLITGHART 264
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 213
DM +AE IL++M +AG+EP TY L+ YA+ GD+D +
Sbjct: 265 GDMQNAENILSVMREAGIEPGPDTYLALLNAYAEKGDIDHV 305
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 17/223 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + N +I+ +
Sbjct: 199 SPTDFLAKMEEANIQPNRVTYQRLIAAYCNKGDIEGASKILGFMKTK--NIPVTEIVFST 256
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
++GH D +A NI +M +AG+EP TY L+ YA+ GD+D +
Sbjct: 257 LITGHARTGDMQNA----ENIL------SVMREAGIEPGPDTYLALLNAYAEKGDIDHVI 306
Query: 367 R---LLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ ++ + + L++ D + II + + +G+ +Y+ EI+ +++ D N +L+
Sbjct: 307 QTLEMMEKTDNYLMDRDLMQIIFSFSKAGYPQYVSEILERMKFERRCIPDVMNLCLNLVT 366
Query: 424 KGQIDAAYRIVNTLARS--ANINGEQLPVGGFLVRHMVKTNQP 464
+G D A +I+ + +S N G F ++H V N P
Sbjct: 367 EGLEDVAVQILVSCPKSLIGKTNESATNFGNFFLQHCVTMNTP 409
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 96/182 (52%), Gaps = 13/182 (7%)
Query: 154 TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 213
T+ IS +NAL+ + Q S L M +A ++P+ TY +L+ Y GD++
Sbjct: 178 TYDISH--YNALLKVYLQNEHEFSPTDFLAKMEEANIQPNRVTYQRLIAAYCNKGDIEGA 235
Query: 214 KTKIPSLK----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTK 269
+ +K P +E+ FS +T + DM +AE IL++M +AG+EP TY
Sbjct: 236 SKILGFMKTKNIPVTEI--VFSTLITGHA--RTGDMQNAENILSVMREAGIEPGPDTYLA 291
Query: 270 LMCGYAKHGDMDSVRR---LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVN 326
L+ YA+ GD+D V + ++ ++ + L++ D + II + + +G+ +Y+ E+ + F
Sbjct: 292 LLNAYAEKGDIDHVIQTLEMMEKTDNYLMDRDLMQIIFSFSKAGYPQYVSEILERMKFER 351
Query: 327 IC 328
C
Sbjct: 352 RC 353
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 97/236 (41%), Gaps = 23/236 (9%)
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEY 396
M +A ++P+ TY +L+ Y GD++ ++L + N +I+ + ++GH
Sbjct: 207 MEEANIQPNRVTYQRLIAAYCNKGDIEGASKILGFMKTK--NIPVTEIVFSTLITGHART 264
Query: 397 ID----EIISKIQPGVGYSADAANHIYHL---INKGQIDAAYRIVNTLARSANINGEQ-- 447
D E I + G ++ L KG ID + + + ++ N ++
Sbjct: 265 GDMQNAENILSVMREAGIEPGPDTYLALLNAYAEKGDIDHVIQTLEMMEKTDNYLMDRDL 324
Query: 448 ------LPVGGF--LVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARS- 498
G+ V +++ + D N +L+ +G D A +I+ + +S
Sbjct: 325 MQIIFSFSKAGYPQYVSEILERMKFERRCIPDVMNLCLNLVTEGLEDVAVQILVSCPKSL 384
Query: 499 -ANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLH--PRAFNLAVLIKA 551
N G F ++H V N P +K+ C +L +E LH P F L +KA
Sbjct: 385 IGKTNESATNFGNFFLQHCVTMNTPFNKLEEFCEKLKEEKLHAAPLEFTLLSALKA 440
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ H+ K+D A+E C ++ P E+L + I+ + +Q+ D + GE
Sbjct: 834 LVTLHLEKDDIPAALEVTLDCFKKYGIMPMIHEVLCKMIEKGETDLIQKAMDFVSQEQGE 893
Query: 608 VNSLYDLMLSFLDA 621
+ LYDL +F++
Sbjct: 894 MTMLYDLFFAFMET 907
>gi|281352621|gb|EFB28205.1| hypothetical protein PANDA_000195 [Ailuropoda melanoleuca]
Length = 1367
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/147 (53%), Positives = 109/147 (74%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 150 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIAAYCNMGDIE 203
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A D+ +AE ILT+M +AG+EP TY L+
Sbjct: 204 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDIENAENILTVMKEAGIEPGPDTYLTLL 263
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +S+L+L
Sbjct: 264 NAYAEKGDIDRVKQTLEKVE-KSDLYL 289
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 17/222 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 169 SPTDFLAKMEEANIQPNRVTYQRLIAAYCNMGDIEGASKILGFMKTK--DLPVTEAVFSA 226
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 227 LVTGHARAGDIENA----ENIL------TVMKEAGIEPGPDTYLTLLNAYAEKGDIDRVK 276
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ KI Y DA N I L+
Sbjct: 277 QTLEKVEKSDLYLMDRDLLQIIFSFSKAGYSQYVPEILEKITYERRYIPDAMNLILLLVT 336
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG 465
+ D A++I+ LA + GF ++H V N P
Sbjct: 337 EKLEDTAFQIL--LACPVSREDGLSDFVGFFLQHCVTMNTPA 376
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 154 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAAYCNMGDIEGASKILGFMK 213
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + D+ +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 214 TKDLPVTEA--VFSALVTGHA--RAGDIENAENILTVMKEAGIEPGPDTYLTLLNAYAEK 269
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+
Sbjct: 270 GDIDRVKQTLEKVEKSDLYLMDRDLLQIIFSFSKAGYSQYVPEI 313
>gi|354467625|ref|XP_003496269.1| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like [Cricetulus griseus]
gi|344247091|gb|EGW03195.1| Leucine-rich PPR motif-containing protein, mitochondrial
[Cricetulus griseus]
Length = 1392
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 104/140 (74%), Gaps = 6/140 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 160 DVSHYNALLKVYLQNEYKFSPTDFLAKMERANIQPNRVTYQ------RLIAAYCNVGDIE 213
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K PI+E VF+AL+ GH++A DM +AE ILT+M +AG+EP TY L+
Sbjct: 214 GASKILGFMKTKDLPITEAVFSALVTGHARAGDMENAENILTVMKEAGIEPGPDTYLALL 273
Query: 202 CGYAKHGDMDSIKTKIPSLK 221
YA+ GD+D +K + +++
Sbjct: 274 NAYAEKGDIDHVKQTLENVE 293
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 17/221 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 179 SPTDFLAKMERANIQPNRVTYQRLIAAYCNVGDIEGASKILGFMKTK--DLPITEAVFSA 236
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 237 LVTGHARAGDMENA----ENIL------TVMKEAGIEPGPDTYLALLNAYAEKGDIDHVK 286
Query: 367 RLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + L + D L II + +G+ +Y+ +I+ K+ Y DA N I L+
Sbjct: 287 QTLENVEKLDHYLTDRDLLHIIVTFSKAGYPQYVSQILEKVTYERRYIPDAMNLILLLVT 346
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A++I+ L S + G F +RH V N P
Sbjct: 347 EKLEDTAFQILLALPMSKEESMNTF--GSFFLRHCVTMNTP 385
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 9/169 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ +KI
Sbjct: 164 YNALLKVYLQNEYKFSPTDFLAKMERANIQPNRVTYQRLIAAYCNVGDIEG-ASKILGFM 222
Query: 222 PQSELFL---CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+L + FS +T + DM +AE ILT+M +AG+EP TY L+ YA+ G
Sbjct: 223 KTKDLPITEAVFSALVTGHA--RAGDMENAENILTVMKEAGIEPGPDTYLALLNAYAEKG 280
Query: 279 DMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF 324
D+D V++ L + L + D L II + +G+ +Y+ ++ V +
Sbjct: 281 DIDHVKQTLENVEKLDHYLTDRDLLHIIVTFSKAGYPQYVSQILEKVTY 329
>gi|149050517|gb|EDM02690.1| leucine-rich PPR-motif containing, isoform CRA_b [Rattus
norvegicus]
Length = 1392
Score = 166 bits (421), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 111/161 (68%), Gaps = 10/161 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 160 DVSHYNALLKVYLQNEYRFSPTDFLAKMEGANIQPNRVTYQ------RLIAAYCSVGDIE 213
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ + PI+E VF+AL+ GH++A DM +AE ILT+M QAG+EP TY L+
Sbjct: 214 GASKILGFMKTRDLPITEAVFSALVTGHARAGDMENAENILTVMKQAGIEPGPDTYLALL 273
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
+A+ GD+D +K + ++ F+ F L I+VS
Sbjct: 274 NAHAEKGDIDHVKQILEKVEKSDHYFMDRDF----LQIIVS 310
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 179 SPTDFLAKMEGANIQPNRVTYQRLIAAYCSVGDIEGASKILGFMKTR--DLPITEAVFSA 236
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M QAG+EP TY L+ +A+ GD+D ++
Sbjct: 237 LVTGHARAGDMENA----ENIL------TVMKQAGIEPGPDTYLALLNAHAEKGDIDHVK 286
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
++L + S ++ D+L II + + +G+ +Y+ EI+ KI DA N I L+
Sbjct: 287 QILEKVEKSDHYFMDRDFLQIIVSFSKAGYPQYVSEILEKITYERRSIPDAMNLILLLVT 346
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG 465
+ D A++++ L + + G F +RH V + P
Sbjct: 347 EKLEDTAFQVLLALPLARDETSSSF--GSFFLRHCVTMDTPA 386
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M A ++P+ TY +L+ Y GD++ + +K
Sbjct: 164 YNALLKVYLQNEYRFSPTDFLAKMEGANIQPNRVTYQRLIAAYCSVGDIEGASKILGFMK 223
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M QAG+EP TY L+ +A+
Sbjct: 224 TRDLPITEA--VFSALVTGHA--RAGDMENAENILTVMKQAGIEPGPDTYLALLNAHAEK 279
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V+++L + S ++ D+L II + + +G+ +Y+ E+
Sbjct: 280 GDIDHVKQILEKVEKSDHYFMDRDFLQIIVSFSKAGYPQYVSEI 323
Score = 42.7 bits (99), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
A ++E +RD+ FPI F L+ GH + ++ IL +M + G++P +TY
Sbjct: 422 AKAVMEALRDEGFPIRTHYFWPLLVGHQKTKNVQGIIDILKIMKEMGVDPDQETY 476
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ H+ K+D A+E C +++ P ++L + I+ + +Q+ D + GE
Sbjct: 827 LVTVHLEKDDLPAALEASIACHEKYKVLPRIHDVLCKLIEKGETDLIQKAMDFVSQEQGE 886
Query: 608 VNSLYDLMLSFL 619
++ LYDL +FL
Sbjct: 887 MSMLYDLFFAFL 898
>gi|334312821|ref|XP_001382190.2| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Monodelphis domestica]
Length = 1447
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 114/169 (67%), Gaps = 11/169 (6%)
Query: 58 SLGPGNLPCEDPFSVHT-----GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ 112
SL P P E VH +L V DISHYNALL+VYL N+H SPTDFLAK+E
Sbjct: 104 SLLPELKPSERTEFVHRIWNKLQQLGVTYDISHYNALLKVYLQNQHKLSPTDFLAKMEEA 163
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
I+PNRVTYQ +LI+ YC +G+IEGA+KIL FM+ K P++E VF+ L+ GH++A
Sbjct: 164 NIQPNRVTYQ------RLIAAYCNEGDIEGASKILGFMKTKDLPVTEIVFSTLVTGHARA 217
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
DM +AE IL++M +AG+EP TY L+ YA+ GD+D+++ + +++
Sbjct: 218 GDMQNAENILSVMREAGIEPGPDTYLTLLSAYAEKGDIDNVRKTLETIE 266
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 28/230 (12%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + +I+ +
Sbjct: 152 SPTDFLAKMEEANIQPNRVTYQRLIAAYCNEGDIEGASKILGFMKTK--DLPVTEIVFST 209
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D++R
Sbjct: 210 LVTGHARAGDMQNA----ENIL------SVMREAGIEPGPDTYLTLLSAYAEKGDIDNVR 259
Query: 367 RLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + + L++ D + II + + +G+ +Y+ EI+ +++ Y D N L+
Sbjct: 260 KTLETIEKTDNYLMDRDLMQIIFSFSKAGYPQYVSEILERMKYERRYIPDVMNLCLSLVT 319
Query: 424 KGQIDAAYRIV---------NTLARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +I+ NT S+N+N G F ++H V N P
Sbjct: 320 ERLEDVAMQILMSCPKSVLENTQENSSNLNN----FGNFFLQHCVTMNTP 365
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 94/172 (54%), Gaps = 13/172 (7%)
Query: 154 TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 213
T+ IS +NAL+ + Q S L M +A ++P+ TY +L+ Y GD++
Sbjct: 131 TYDISH--YNALLKVYLQNQHKLSPTDFLAKMEEANIQPNRVTYQRLIAAYCNEGDIEGA 188
Query: 214 KTKIPSLK----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTK 269
+ +K P +E+ FS +T + DM +AE IL++M +AG+EP TY
Sbjct: 189 SKILGFMKTKDLPVTEI--VFSTLVTGHA--RAGDMQNAENILSVMREAGIEPGPDTYLT 244
Query: 270 LMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
L+ YA+ GD+D+VR+ L ++ + L++ D + II + + +G+ +Y+ E+
Sbjct: 245 LLSAYAEKGDIDNVRKTLETIEKTDNYLMDRDLMQIIFSFSKAGYPQYVSEI 296
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 132/343 (38%), Gaps = 70/343 (20%)
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEY 396
M +A ++P+ TY +L+ Y GD++ ++L + + +I+ + V+GH
Sbjct: 160 MEEANIQPNRVTYQRLIAAYCNEGDIEGASKILGFMKTK--DLPVTEIVFSTLVTGHARA 217
Query: 397 ID----EIISKIQPGVGYSADAANHIYHL---INKGQIDAAYRIVNTLARSAN--INGEQ 447
D E I + G ++ L KG ID + + T+ ++ N ++ +
Sbjct: 218 GDMQNAENILSVMREAGIEPGPDTYLTLLSAYAEKGDIDNVRKTLETIEKTDNYLMDRDL 277
Query: 448 LPV------GGF--LVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIV------- 492
+ + G+ V +++ + Y D N L+ + D A +I+
Sbjct: 278 MQIIFSFSKAGYPQYVSEILERMKYERRYIPDVMNLCLSLVTERLEDVAMQILMSCPKSV 337
Query: 493 --NTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLH--PRAFNLAVL 548
NT S+N+N G F ++H V N P +K+ C +L +E LH P F+L
Sbjct: 338 LENTQENSSNLNN----FGNFFLQHCVTMNTPFNKLEEFCQKLKEEKLHVAPLQFSL--- 390
Query: 549 IKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEV 608
YC + R T +L+K + + L T
Sbjct: 391 ------------------YCALKDRKTALAADLMKAMKEQKTPIRPHYFWPLLTGHQKNK 432
Query: 609 NSLYDLMLSFLDAEVLRILQVAEA--EFGVGSNTETLRDYVLP 649
N + I+++ + E GV ++ET +YV P
Sbjct: 433 N-------------IQGIIEIVQKMHELGVNPDSETYGNYVFP 462
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ H+ K+D A+E C ++ P E+L + I+ + +Q+ D T GE
Sbjct: 805 LVTLHLEKDDIPAALEATVDCYKKYGIMPKIHEVLCKLIEKGETDLIQKAMDFVTQEQGE 864
Query: 608 VNSLYDLMLSFL 619
+ LYDL +F+
Sbjct: 865 MTMLYDLFFAFM 876
>gi|62988655|gb|AAY24043.1| unknown [Homo sapiens]
Length = 549
Score = 166 bits (421), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 108/147 (73%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ+LI++ YC G+IE
Sbjct: 161 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAS------YCNVGDIE 214
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M AG+EP TY L+
Sbjct: 215 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALL 274
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL L
Sbjct: 275 NAYAEKGDIDHVKQTLEKVE-KSELHL 300
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 180 SPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTK--DLPVTEAVFSA 237
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M AG+EP TY L+ YA+ GD+D ++
Sbjct: 238 LVTGHARAGDMENA----ENIL------TVMRDAGIEPGPDTYLALLNAYAEKGDIDHVK 287
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 288 QTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVT 347
Query: 424 KGQIDAAYRIVNTLARSANINGEQLP--VGGFLVRHMVKTNQP 464
+ D A +I+ + ++ E P G F ++H V N P
Sbjct: 348 EKLEDVALQIL----LACPVSKEDGPSVFGSFFLQHCVTMNTP 386
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 165 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMK 224
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M AG+EP TY L+ YA+
Sbjct: 225 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEK 280
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+
Sbjct: 281 GDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEI 324
>gi|332227318|ref|XP_003262841.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich PPR motif-containing
protein, mitochondrial [Nomascus leucogenys]
Length = 1394
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/147 (53%), Positives = 108/147 (73%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ+LI++ YC G+IE
Sbjct: 161 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAS------YCNVGDIE 214
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M AG+EP TY L+
Sbjct: 215 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALL 274
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D ++ + ++ +SEL L
Sbjct: 275 NAYAEKGDIDHVRQTLEKVE-KSELHL 300
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 17/221 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 180 SPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTK--DLPVTEAVFSA 237
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M AG+EP TY L+ YA+ GD+D +R
Sbjct: 238 LVTGHARAGDMENA----ENIL------TVMRDAGIEPGPDTYLALLNAYAEKGDIDHVR 287
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 288 QTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVT 347
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +I+ LA + + G F +RH V N P
Sbjct: 348 EKLEDVALQIL--LACPVSKEDGSIVFGNFFLRHCVTMNTP 386
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 165 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMK 224
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M AG+EP TY L+ YA+
Sbjct: 225 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEK 280
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV-SAIVC 323
GD+D VR+ L + S L++ D L II + + +G+ +Y+ E+ + C
Sbjct: 281 GDIDHVRQTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTC 330
>gi|118600274|gb|AAH26034.1| LRPPRC protein [Homo sapiens]
Length = 531
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 108/147 (73%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ+LI++ YC G+IE
Sbjct: 161 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAS------YCNVGDIE 214
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M AG+EP TY L+
Sbjct: 215 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALL 274
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +SEL L
Sbjct: 275 NAYAEKGDIDHVKQTLEKVE-KSELHL 300
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 180 SPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTK--DLPVTEAVFSA 237
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M AG+EP TY L+ YA+ GD+D ++
Sbjct: 238 LVTGHARAGDMENA----ENIL------TVMRDAGIEPGPDTYLALLNAYAEKGDIDHVK 287
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ K+ Y DA N I L+
Sbjct: 288 QTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEILEKVTCERRYIPDAMNLILLLVT 347
Query: 424 KGQIDAAYRIVNTLARSANINGEQLP--VGGFLVRHMVKTNQP 464
+ D A +I+ + ++ E P G F ++H V N P
Sbjct: 348 EKLEDVALQIL----LACPVSKEDGPSVFGSFFLQHCVTMNTP 386
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 86/164 (52%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 165 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMK 224
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M AG+EP TY L+ YA+
Sbjct: 225 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEK 280
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+
Sbjct: 281 GDIDHVKQTLEKVEKSELHLMDRDLLQIIFSFSKAGYPQYVSEI 324
>gi|296482624|tpg|DAA24739.1| TPA: CG14786-like [Bos taurus]
Length = 1391
Score = 166 bits (420), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 108/147 (73%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NEH FSPTDFLAK+E ++PNRVTYQ +LI+ YC G+IE
Sbjct: 162 DVSHYNALLKVYLQNEHKFSPTDFLAKMEKGNVQPNRVTYQ------RLIAAYCNMGDIE 215
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+ IL FM+ K P++E VF+AL+ GH+++ DM +AE ILT+M +AG+EP TY L+
Sbjct: 216 GASTILGFMKTKDLPVTEAVFSALVTGHARSGDMENAENILTVMKEAGIEPGPDTYLALL 275
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +S+L+L
Sbjct: 276 NAYAEKGDIDHVKQTLEKVE-KSDLYL 301
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M + ++P+ TY +L+ Y GD++ +L + + + + +
Sbjct: 181 SPTDFLAKMEKGNVQPNRVTYQRLIAAYCNMGDIEGASTILGFMKTK--DLPVTEAVFSA 238
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 239 LVTGHARSGDMENA----ENIL------TVMKEAGIEPGPDTYLALLNAYAEKGDIDHVK 288
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ KI Y D N I L+
Sbjct: 289 QTLEKVEKSDLYLMDRDLLQIILSFSKAGYPQYVPEILEKITYERRYIPDTMNLILLLVT 348
Query: 424 KGQIDAAYRIV--NTLARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +I+ ++R +++N G F +RH V N P
Sbjct: 349 EKLEDTALQILLACPISRESSLND----FGSFFLRHCVTVNTP 387
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M + ++P+ TY +L+ Y GD++ T + +K
Sbjct: 166 YNALLKVYLQNEHKFSPTDFLAKMEKGNVQPNRVTYQRLIAAYCNMGDIEGASTILGFMK 225
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T S DM +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 226 TKDLPVTEA--VFSALVTGHA--RSGDMENAENILTVMKEAGIEPGPDTYLALLNAYAEK 281
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+
Sbjct: 282 GDIDHVKQTLEKVEKSDLYLMDRDLLQIILSFSKAGYPQYVPEI 325
Score = 40.4 bits (93), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ ++ K+D A+E+ C +++ P ++L + I+ + +Q+ D + GE
Sbjct: 826 LVTLYLEKDDLPAALESTIDCYEKYKILPRIHDVLCKLIEKGETELIQKAMDFVSQEQGE 885
Query: 608 VNSLYDLMLSFL 619
+ LYDL +FL
Sbjct: 886 MTMLYDLFFAFL 897
>gi|403269599|ref|XP_003926809.1| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Saimiri boliviensis boliviensis]
Length = 1395
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 110/153 (71%), Gaps = 7/153 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL D+SHYNALL+VYL NE+ FS TDFLAK+E I+PNRVTYQ +LI+ YC
Sbjct: 155 ELGAVYDVSHYNALLKVYLQNEYKFSQTDFLAKMEEANIQPNRVTYQ------RLIASYC 208
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G+IEGA+KIL FM+ K PI+E VF++LI GH++A DM +A+ ILT+M +AG+EP
Sbjct: 209 NVGDIEGASKILGFMKTKDLPITEAVFDSLITGHARAGDMENAKNILTVMREAGIEPGPD 268
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
TY L+ YA+ GD+D +K + ++ +SEL+L
Sbjct: 269 TYLALLNAYAEKGDIDHVKQTLEKVE-KSELYL 300
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 23/224 (10%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + L I A+
Sbjct: 180 SQTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILG-----FMKTKDLPITEAV 234
Query: 307 ---AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
++GH D +A NI +M +AG+EP TY L+ YA+ GD+D
Sbjct: 235 FDSLITGHARAGDMENA----KNIL------TVMREAGIEPGPDTYLALLNAYAEKGDID 284
Query: 364 SIRRLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH 420
+++ L + S L++ D II + A +G+ +Y+ EI+ K+ Y DA N I
Sbjct: 285 HVKQTLEKVEKSELYLMDRDLFQIIFSFAKAGYPQYVSEILEKVSRERRYIPDAMNLILL 344
Query: 421 LINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
L+ + D A +I+ LA + G F +RH V N P
Sbjct: 345 LVTEKLEDTALQIL--LACPVSKEDGLSDFGNFFLRHCVTMNTP 386
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 165 YNALLKVYLQNEYKFSQTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMK 224
Query: 222 PQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ L + + + LI + DM +A+ ILT+M +AG+EP TY L+ YA+ G
Sbjct: 225 TKD---LPITEAVFDSLITGHARAGDMENAKNILTVMREAGIEPGPDTYLALLNAYAEKG 281
Query: 279 DMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
D+D V++ L + S L++ D II + A +G+ +Y+ E+
Sbjct: 282 DIDHVKQTLEKVEKSELYLMDRDLFQIIFSFAKAGYPQYVSEI 324
Score = 39.7 bits (91), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ ++ K+D A+E C +++ P ++L + I+ + +Q+ D + GE
Sbjct: 828 LVTVYLEKDDLPAALEVAIDCYEKYKVLPRIHDILCKLIEKGETDLIQKAMDFVSQEQGE 887
Query: 608 VNSLYDLMLSFL 619
+ LYDL +FL
Sbjct: 888 MMMLYDLFFAFL 899
>gi|359070014|ref|XP_002691297.2| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Bos taurus]
Length = 1394
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 108/147 (73%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NEH FSPTDFLAK+E ++PNRVTYQ +LI+ YC G+IE
Sbjct: 162 DVSHYNALLKVYLQNEHKFSPTDFLAKMEKGNVQPNRVTYQ------RLIAAYCNMGDIE 215
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+ IL FM+ K P++E VF+AL+ GH+++ DM +AE ILT+M +AG+EP TY L+
Sbjct: 216 GASTILGFMKTKDLPVTEAVFSALVTGHARSGDMENAENILTVMKEAGIEPGPDTYLALL 275
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +S+L+L
Sbjct: 276 NAYAEKGDIDHVKQTLEKVE-KSDLYL 301
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M + ++P+ TY +L+ Y GD++ +L + + + + +
Sbjct: 181 SPTDFLAKMEKGNVQPNRVTYQRLIAAYCNMGDIEGASTILGFMKTK--DLPVTEAVFSA 238
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 239 LVTGHARSGDMENA----ENIL------TVMKEAGIEPGPDTYLALLNAYAEKGDIDHVK 288
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ KI Y D N I L+
Sbjct: 289 QTLEKVEKSDLYLMDRDLLQIILSFSKAGYPQYVPEILEKITYERRYIPDTMNLILLLVT 348
Query: 424 KGQIDAAYRIVNT--LARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +I+ ++R +++N G F +RH V N P
Sbjct: 349 EKLEDTALQILLACPISRESSLND----FGSFFLRHCVTVNTP 387
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M + ++P+ TY +L+ Y GD++ T + +K
Sbjct: 166 YNALLKVYLQNEHKFSPTDFLAKMEKGNVQPNRVTYQRLIAAYCNMGDIEGASTILGFMK 225
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T S DM +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 226 TKDLPVTEA--VFSALVTGHA--RSGDMENAENILTVMKEAGIEPGPDTYLALLNAYAEK 281
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+
Sbjct: 282 GDIDHVKQTLEKVEKSDLYLMDRDLLQIILSFSKAGYPQYVPEI 325
Score = 40.4 bits (93), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ ++ K+D A+E+ C +++ P ++L + I+ + +Q+ D + GE
Sbjct: 829 LVTLYLEKDDLPAALESTIDCYEKYKILPRIHDVLCKLIEKGETELIQKAMDFVSQEQGE 888
Query: 608 VNSLYDLMLSFL 619
+ LYDL +FL
Sbjct: 889 MTMLYDLFFAFL 900
>gi|440899597|gb|ELR50879.1| Leucine-rich PPR motif-containing protein, mitochondrial [Bos
grunniens mutus]
Length = 1408
Score = 166 bits (420), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 108/147 (73%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NEH FSPTDFLAK+E ++PNRVTYQ +LI+ YC G+IE
Sbjct: 162 DVSHYNALLKVYLQNEHKFSPTDFLAKMEKGNVQPNRVTYQ------RLIAAYCNMGDIE 215
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+ IL FM+ K P++E VF+AL+ GH+++ DM +AE ILT+M +AG+EP TY L+
Sbjct: 216 GASTILGFMKTKDLPVTEAVFSALVTGHARSGDMENAENILTVMKEAGIEPGPDTYLALL 275
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +S+L+L
Sbjct: 276 NAYAEKGDIDHVKQTLEKVE-KSDLYL 301
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M + ++P+ TY +L+ Y GD++ +L + + + + +
Sbjct: 181 SPTDFLAKMEKGNVQPNRVTYQRLIAAYCNMGDIEGASTILGFMKTK--DLPVTEAVFSA 238
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 239 LVTGHARSGDMENA----ENIL------TVMKEAGIEPGPDTYLALLNAYAEKGDIDHVK 288
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ KI Y D N I L+
Sbjct: 289 QTLEKVEKSDLYLMDRDLLQIILSFSKAGYPQYVPEILEKITYERRYIPDTMNLILLLVT 348
Query: 424 KGQIDAAYRIVNT--LARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +I+ ++R +++N G F +RH V N P
Sbjct: 349 EKLEDTALQILLACPISRESSLND----FGSFFLRHCVTVNTP 387
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M + ++P+ TY +L+ Y GD++ T + +K
Sbjct: 166 YNALLKVYLQNEHKFSPTDFLAKMEKGNVQPNRVTYQRLIAAYCNMGDIEGASTILGFMK 225
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T S DM +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 226 TKDLPVTEA--VFSALVTGHA--RSGDMENAENILTVMKEAGIEPGPDTYLALLNAYAEK 281
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+
Sbjct: 282 GDIDHVKQTLEKVEKSDLYLMDRDLLQIILSFSKAGYPQYVPEI 325
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ ++ K+D A+E+ C +++ P ++L + I+ + +Q+ D + GE
Sbjct: 843 LVTLYLEKDDLPAALESTIDCYEKYKILPRIHDVLCKLIEKGETELIQKAMDFVSQEQGE 902
Query: 608 VNSLYDLMLSFL 619
+ LYDL +FL
Sbjct: 903 MTMLYDLFFAFL 914
>gi|134031976|ref|NP_082509.2| leucine-rich PPR motif-containing protein, mitochondrial precursor
[Mus musculus]
gi|156632704|sp|Q6PB66.2|LPPRC_MOUSE RecName: Full=Leucine-rich PPR motif-containing protein,
mitochondrial; AltName: Full=130 kDa leucine-rich
protein; Short=LRP 130; Short=mLRP130; Flags: Precursor
gi|148706639|gb|EDL38586.1| leucine-rich PPR-motif containing [Mus musculus]
Length = 1392
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+L V D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC
Sbjct: 154 QLGVVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEGANIQPNRVTYQ------RLIAAYC 207
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G+IEGA+KIL FM+ K PI+E VF+AL+ GH++A DM +AE ILT+M QAG+EP
Sbjct: 208 NVGDIEGASKILGFMKTKDLPITEAVFSALVTGHARAGDMENAENILTVMKQAGIEPGPD 267
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
TY L+ +A+ GD+ ++ + ++ F+ F
Sbjct: 268 TYLALLNAHAERGDIGQVRQILEKVEKSDHYFMDRDF 304
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 23/224 (10%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M A ++P+ TY +L+ Y GD++ ++L + L I A+
Sbjct: 179 SPTDFLAKMEGANIQPNRVTYQRLIAAYCNVGDIEGASKILG-----FMKTKDLPITEAV 233
Query: 307 ---AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
V+GH D +A NI +M QAG+EP TY L+ +A+ GD+
Sbjct: 234 FSALVTGHARAGDMENA----ENIL------TVMKQAGIEPGPDTYLALLNAHAERGDIG 283
Query: 364 SIRRLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH 420
+R++L + S ++ D+L +I + + +G+ +Y+ EI+ KI DA N I
Sbjct: 284 QVRQILEKVEKSDHYFMDRDFLQVIFSFSKAGYPQYVSEILEKITYERRSIPDAMNLILF 343
Query: 421 LINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
L + D A++++ L S + + + G F +RH V + P
Sbjct: 344 LATEKLEDTAFQVLLALPLSKDESSDNF--GSFFLRHCVTLDLP 385
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M A ++P+ TY +L+ Y GD++ +KI
Sbjct: 164 YNALLKVYLQNEYKFSPTDFLAKMEGANIQPNRVTYQRLIAAYCNVGDIEG-ASKILGFM 222
Query: 222 PQSELFL---CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+L + FS +T + DM +AE ILT+M QAG+EP TY L+ +A+ G
Sbjct: 223 KTKDLPITEAVFSALVTGHA--RAGDMENAENILTVMKQAGIEPGPDTYLALLNAHAERG 280
Query: 279 DMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
D+ VR++L + S ++ D+L +I + + +G+ +Y+ E+
Sbjct: 281 DIGQVRQILEKVEKSDHYFMDRDFLQVIFSFSKAGYPQYVSEI 323
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 118 RVTYQQLISNSKLISKYC--QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
R+ +L S+S + +C Q A ++E +R++ FPI F L+ GH + ++
Sbjct: 395 RLRDAKLHSSSLQFTLHCALQANRTALAKAVMEALREEGFPIRPHYFWPLLAGHQKTKNV 454
Query: 176 ASAEGILTMMSQAGLEPSAQTY 197
IL +M++ G++P +TY
Sbjct: 455 QGIIDILKIMNKVGVDPDQETY 476
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ H+ K D A+E C +++ P ++L + ++ + +Q+ D + GE
Sbjct: 827 LVTVHLEKGDLPAALEASIACHKKYKVLPRIHDVLCKLVEKGETDLIQKAMDFVSQEQGE 886
Query: 608 VNSLYDLMLSFL 619
+ LYDL +FL
Sbjct: 887 MTMLYDLFFAFL 898
>gi|357615715|gb|EHJ69797.1| hypothetical protein KGM_21765 [Danaus plexippus]
Length = 1977
Score = 166 bits (419), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 114/175 (65%), Gaps = 13/175 (7%)
Query: 52 KWCSEPSLGPGNLPCEDPFSVHT-----GELDVPLDISHYNALLRVYLDNEHTFSPTDFL 106
+ C E L P LP + V E +P+D+SHYNALLRVY++NEH FSP FL
Sbjct: 104 RCCGE--LVPEELPQQRTLLVQKIWNVLTERGIPMDVSHYNALLRVYIENEHPFSPAQFL 161
Query: 107 AKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
++E +G++PNRVTYQ +L+ +YCQ+G++EGATK+LE MR+ P+SE V NAL+
Sbjct: 162 DEMEKKGLQPNRVTYQ------RLMWRYCQEGDVEGATKVLEKMRELNMPVSEPVLNALV 215
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
GH+ D A+ +L M+ AGL+PS +TY L CGYAK GD+ +++ I + K
Sbjct: 216 MGHAFHGDTDGAKAVLETMAGAGLQPSNRTYALLACGYAKQGDIANVENIISTAK 270
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 143/608 (23%), Positives = 251/608 (41%), Gaps = 134/608 (22%)
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
L M + GL+P+ TY +LM Y + GD++ ++L + +N + + V GH
Sbjct: 161 LDEMEKKGLQPNRVTYQRLMWRYCQEGDVEGATKVLEKMRE--LNMPVSEPVLNALVMGH 218
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ D A M+ AGL+PS +TY L CGYAK GD+ ++ +++
Sbjct: 219 AFHGDTDGAKAVL----------ETMAGAGLQPSNRTYALLACGYAKQGDIANVENIIST 268
Query: 372 NGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQID 428
L + D LDII LA+SGH ++ I +I P
Sbjct: 269 AKDKEMMLADKDLLDIIEHLALSGH----EDKIEQIFP---------------------- 302
Query: 429 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAA 488
HM K G+GY+ + N I+ L+N G A
Sbjct: 303 ----------------------------HMHK----GLGYNQEVCNLIFKLLNSGLDSTA 330
Query: 489 YRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVL 548
+++ T+ +++N + + L G F ++H++K N+ ID ++ C L +E L P A
Sbjct: 331 KKVMKTMPKTSNTD-DTLFKGAFYIKHLLKLNRSIDSIVETCRDLQNEELIPNAL----- 384
Query: 549 IKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKR-FIQAEDAACLQRITDLSTSIHGE 607
Y + T K EL +R F + E E
Sbjct: 385 ------------------YIATESSLTQGKCELAQRLFAEMEKDGV-------------E 413
Query: 608 VNSLYDLMLSFLDAE------VLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEV 661
+ Y L + +L IL+ ++ G+ + ETLRDY++P L N + V
Sbjct: 414 IRPHYYWPLLVQKGKENDEEGLLHILREMGSK-GIAVSGETLRDYIIPYLM-QNDIPQNV 471
Query: 662 FSQLRSVGVTIGSITSAYVVHMLRQHNLKEAALLAKSF--RAHYAKVVVRPVLAVSYLRT 719
+L+ V + ++ +L L +AA +A S+ R Y+ ++ RP++ +RT
Sbjct: 472 IVKLQIANVPVIHSARQVMIDLLESGKLDKAAEIALSYRLRGQYS-LITRPLINC-LIRT 529
Query: 720 QDLPSLVTVVRAVCENWEKGEEGEKEEEGEEKTAGQLIDMDRIFAGNVLLDIYKATRQDP 779
+D+ S V ++ + +++ +++ + ++ + G +L K T ++
Sbjct: 530 KDVESFVKLLHVAS-----SPQTQEDVSNDDRPSDDNSNVSEV--GRILKTAVKNTARN- 581
Query: 780 NVVSHLEQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDLMPQPLQYV 839
E +L+ + + I S++ IQ LG +T+ IS+ L LTS L PL++
Sbjct: 582 ---DLAEDILSQALSKGLRIDTSSAEEIQRFLGDRMTTKISELLSKLTSSSLELAPLEFS 638
Query: 840 PSMFIPRG 847
PR
Sbjct: 639 KRNQGPRS 646
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 115/233 (49%), Gaps = 27/233 (11%)
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
KI + ++ P+ +NAL+ + + S L M + GL+P+ TY +LM Y
Sbjct: 124 KIWNVLTERGIPMDVSHYNALLRVYIENEHPFSPAQFLDEMEKKGLQPNRVTYQRLMWRY 183
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLE 261
+ GD++ TK+ L+ EL + S + N L++ D A+ +L M+ AGL+
Sbjct: 184 CQEGDVEGA-TKV--LEKMRELNMPVSEPVLNALVMGHAFHGDTDGAKAVLETMAGAGLQ 240
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
PS +TY L CGYAK GD+ +V +++ + L + D LDII LA+SGH + I+++
Sbjct: 241 PSNRTYALLACGYAKQGDIANVENIISTAKDKEMMLADKDLLDIIEHLALSGHEDKIEQI 300
Query: 319 ----------SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+ VC N+ F L +GL+ +A+ K M + D
Sbjct: 301 FPHMHKGLGYNQEVC--NLIFKLL------NSGLDSTAKKVMKTMPKTSNTDD 345
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
Query: 479 LINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHM--VKTNQPIDKVLAVCHRLTDE 536
L+ +ID A + +N S N + + + + + + + I+KV + L +
Sbjct: 749 LVRANRIDEAIQFLNDNKGSENPDTVSFVLKSKIWQMLNNLAEQKDIEKVKLMTKTLLEN 808
Query: 537 N-LHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQ 595
N + P L IK H+L +D G++ FE C Q+R+TPWKGEL+K I EDA LQ
Sbjct: 809 NYVEPSNVILGPSIKVHLLNDDLEGSLTEFERCCKQYRSTPWKGELMKTLILKEDATKLQ 868
Query: 596 RITDLSTSIHGEVNSLYDLMLSFLDAEVLR 625
+ D+ST IHGEVN L+DL+L+F++ LR
Sbjct: 869 WLADISTQIHGEVNILHDLVLAFVECGRLR 898
>gi|149050516|gb|EDM02689.1| leucine-rich PPR-motif containing, isoform CRA_a [Rattus
norvegicus]
Length = 296
Score = 166 bits (419), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 76/133 (57%), Positives = 100/133 (75%), Gaps = 6/133 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 160 DVSHYNALLKVYLQNEYRFSPTDFLAKMEGANIQPNRVTYQ------RLIAAYCSVGDIE 213
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ + PI+E VF+AL+ GH++A DM +AE ILT+M QAG+EP TY L+
Sbjct: 214 GASKILGFMKTRDLPITEAVFSALVTGHARAGDMENAENILTVMKQAGIEPGPDTYLALL 273
Query: 202 CGYAKHGDMDSIK 214
+A+ GD+D +K
Sbjct: 274 NAHAEKGDIDHVK 286
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M A ++P+ TY +L+ Y GD++ +KI
Sbjct: 164 YNALLKVYLQNEYRFSPTDFLAKMEGANIQPNRVTYQRLIAAYCSVGDIEG-ASKILGFM 222
Query: 222 PQSELFL---CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+L + FS +T + DM +AE ILT+M QAG+EP TY L+ +A+ G
Sbjct: 223 KTRDLPITEAVFSALVTGHA--RAGDMENAENILTVMKQAGIEPGPDTYLALLNAHAEKG 280
Query: 279 DMDSVRRL 286
D+D V+++
Sbjct: 281 DIDHVKQI 288
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 18/125 (14%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M A ++P+ TY +L+ Y GD++ ++L + L I A+
Sbjct: 179 SPTDFLAKMEGANIQPNRVTYQRLIAAYCSVGDIEGASKILG-----FMKTRDLPITEAV 233
Query: 307 ---AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
V+GH D +A NI +M QAG+EP TY L+ +A+ GD+D
Sbjct: 234 FSALVTGHARAGDMENA----ENILT------VMKQAGIEPGPDTYLALLNAHAEKGDID 283
Query: 364 SIRRL 368
++++
Sbjct: 284 HVKQI 288
>gi|21165513|dbj|BAB93528.1| leucine rich protein mLRP130 [Mus musculus]
Length = 1306
Score = 166 bits (419), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+L V D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC
Sbjct: 68 QLGVVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEGANIQPNRVTYQ------RLIAAYC 121
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G+IEGA+KIL FM+ K PI+E VF+AL+ GH++A DM +AE ILT+M QAG+EP
Sbjct: 122 NVGDIEGASKILGFMKTKDLPITEAVFSALVTGHARAGDMENAENILTVMKQAGIEPGPD 181
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
TY L+ +A+ GD+ ++ + ++ F+ F
Sbjct: 182 TYLALLNAHAERGDIGQVRQILEKVEKSDHYFMDRDF 218
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 23/224 (10%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M A ++P+ TY +L+ Y GD++ ++L + L I A+
Sbjct: 93 SPTDFLAKMEGANIQPNRVTYQRLIAAYCNVGDIEGASKILG-----FMKTKDLPITEAV 147
Query: 307 ---AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
V+GH D +A NI +M QAG+EP TY L+ +A+ GD+
Sbjct: 148 FSALVTGHARAGDMENA----ENIL------TVMKQAGIEPGPDTYLALLNAHAERGDIG 197
Query: 364 SIRRLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH 420
+R++L + S ++ D+L +I + + +G+ +Y+ EI+ KI DA N I
Sbjct: 198 QVRQILEKVEKSDHYFMDRDFLQVIFSFSKAGYPQYVSEILEKITYERRSIPDAMNLILF 257
Query: 421 LINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
L + D A++++ L S + + + G F +RH V + P
Sbjct: 258 LATEKLEDTAFQVLLALPLSKDESSDNF--GSFFLRHCVTLDLP 299
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M A ++P+ TY +L+ Y GD++ +KI
Sbjct: 78 YNALLKVYLQNEYKFSPTDFLAKMEGANIQPNRVTYQRLIAAYCNVGDIEG-ASKILGFM 136
Query: 222 PQSELFL---CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+L + FS +T + DM +AE ILT+M QAG+EP TY L+ +A+ G
Sbjct: 137 KTKDLPITEAVFSALVTGHA--RAGDMENAENILTVMKQAGIEPGPDTYLALLNAHAERG 194
Query: 279 DMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
D+ VR++L + S ++ D+L +I + + +G+ +Y+ E+
Sbjct: 195 DIGQVRQILEKVEKSDHYFMDRDFLQVIFSFSKAGYPQYVSEI 237
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 118 RVTYQQLISNSKLISKYC--QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
R+ +L S+S + +C Q A ++E +R++ FPI F L+ GH + ++
Sbjct: 309 RLRDAKLHSSSLQFTLHCALQANRTALAKAVMEALREEGFPIRPHYFWPLLAGHQKTKNV 368
Query: 176 ASAEGILTMMSQAGLEPSAQTY 197
IL +M++ G++P +TY
Sbjct: 369 QGIIDILKIMNEVGVDPDQETY 390
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ H+ K D A+E C +++ P ++L + ++ + +Q+ D + GE
Sbjct: 741 LVTVHLEKGDLPAALEASIACHKKYKVLPRIHDVLCKLVEKGETDLIQKAMDFVSQEQGE 800
Query: 608 VNSLYDLMLSFL 619
+ LYDL +FL
Sbjct: 801 MTMLYDLFFAFL 812
>gi|37589470|gb|AAH59862.1| Leucine-rich PPR-motif containing [Mus musculus]
Length = 1306
Score = 166 bits (419), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 108/157 (68%), Gaps = 6/157 (3%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+L V D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC
Sbjct: 68 QLGVVYDVSHYNALLKVYLQNEYKFSPTDFLAKMEGANIQPNRVTYQ------RLIAAYC 121
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G+IEGA+KIL FM+ K PI+E VF+AL+ GH++A DM +AE ILT+M QAG+EP
Sbjct: 122 NVGDIEGASKILGFMKTKDLPITEAVFSALVTGHARAGDMENAENILTVMKQAGIEPGPD 181
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
TY L+ +A+ GD+ ++ + ++ F+ F
Sbjct: 182 TYLALLNAHAERGDIGQVRQILEKVEKSDHYFMDRDF 218
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 23/224 (10%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M A ++P+ TY +L+ Y GD++ ++L + L I A+
Sbjct: 93 SPTDFLAKMEGANIQPNRVTYQRLIAAYCNVGDIEGASKILG-----FMKTKDLPITEAV 147
Query: 307 ---AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
V+GH D +A NI +M QAG+EP TY L+ +A+ GD+
Sbjct: 148 FSALVTGHARAGDMENA----ENIL------TVMKQAGIEPGPDTYLALLNAHAERGDIG 197
Query: 364 SIRRLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH 420
+R++L + S ++ D+L +I + + +G+ +Y+ EI+ KI DA N I
Sbjct: 198 QVRQILEKVEKSDHYFMDRDFLQVIFSFSKAGYPQYVSEILEKITYERRSIPDAMNLILF 257
Query: 421 LINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
L + D A++++ L S + + + G F +RH V + P
Sbjct: 258 LATEKLEDTAFQVLLALPLSKDESSDNF--GSFFLRHCVTLDLP 299
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M A ++P+ TY +L+ Y GD++ +KI
Sbjct: 78 YNALLKVYLQNEYKFSPTDFLAKMEGANIQPNRVTYQRLIAAYCNVGDIEG-ASKILGFM 136
Query: 222 PQSELFL---CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+L + FS +T + DM +AE ILT+M QAG+EP TY L+ +A+ G
Sbjct: 137 KTKDLPITEAVFSALVTGHA--RAGDMENAENILTVMKQAGIEPGPDTYLALLNAHAERG 194
Query: 279 DMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
D+ VR++L + S ++ D+L +I + + +G+ +Y+ E+
Sbjct: 195 DIGQVRQILEKVEKSDHYFMDRDFLQVIFSFSKAGYPQYVSEI 237
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 118 RVTYQQLISNSKLISKYC--QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
R+ +L S+S + +C Q A ++E +R++ FPI F L+ GH + ++
Sbjct: 309 RLRDAKLHSSSLQFTLHCALQANRTALAKAVMEALREEGFPIRPHYFWPLLAGHQKTKNV 368
Query: 176 ASAEGILTMMSQAGLEPSAQTY 197
IL +M++ G++P +TY
Sbjct: 369 QGIIDILKIMNKVGVDPDQETY 390
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ H+ K D A+E C +++ P ++L + ++ + +Q+ D + GE
Sbjct: 741 LVTVHLEKGDLPAALEASIACHKKYKVLPRIHDVLCKLVEKGETDLIQKAMDFVSQEQGE 800
Query: 608 VNSLYDLMLSFL 619
+ LYDL +FL
Sbjct: 801 MTMLYDLFFAFL 812
>gi|801893|gb|AAA67549.1| leucine-rich PPR-motif containing protein [Homo sapiens]
Length = 1273
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 103/140 (73%), Gaps = 6/140 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ+LI++ YC G+IE
Sbjct: 40 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAS------YCNVGDIE 93
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A DM +AE ILT+M AG+EP TY L+
Sbjct: 94 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDMENAENILTVMRDAGIEPGPDTYLALL 153
Query: 202 CGYAKHGDMDSIKTKIPSLK 221
YA+ GD+D +K + ++
Sbjct: 154 NAYAEKGDIDHVKQTLEKVE 173
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 44 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMK 103
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + DM +AE ILT+M AG+EP TY L+ YA+
Sbjct: 104 TKDLPVTEA--VFSALVTGHA--RAGDMENAENILTVMRDAGIEPGPDTYLALLNAYAEK 159
Query: 278 GDMDSVRRLLAQSGS---SLVNGDYLDIIHALAVSGH 311
GD+D V++ L + L++ D L II + + +G+
Sbjct: 160 GDIDHVKQTLEKVEKFELHLMDRDLLQIIFSFSKAGY 196
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 59 SPTDFLAKMEEANIQPNRVTYQRLIASYCNVGDIEGASKILGFMKTK--DLPVTEAVFSA 116
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M AG+EP TY L+ YA+ GD+D ++
Sbjct: 117 LVTGHARAGDMENA----ENIL------TVMRDAGIEPGPDTYLALLNAYAEKGDIDHVK 166
Query: 367 RLLAQNGS---SLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + L++ D L II + + +G+ + K Y DA N I L+
Sbjct: 167 QTLEKVEKFELHLMDRDLLQIIFSFSKAGYLSMSQKFWKKFTCERRYIPDAMNLILLLVT 226
Query: 424 KGQIDAAYRIVNTLARSANINGEQLP--VGGFLVRHMVKTNQP 464
+ D A +I+ + ++ E P G F ++H V N P
Sbjct: 227 EKLEDVALQIL----LACPVSKEDGPSVFGSFFLQHCVTMNTP 265
>gi|358421656|ref|XP_003585062.1| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like, partial [Bos taurus]
Length = 478
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 108/147 (73%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NEH FSPTDFLAK+E ++PNRVTYQ +LI+ YC G+IE
Sbjct: 112 DVSHYNALLKVYLQNEHKFSPTDFLAKMEKGNVQPNRVTYQ------RLIAAYCNMGDIE 165
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+ IL FM+ K P++E VF+AL+ GH+++ DM +AE ILT+M +AG+EP TY L+
Sbjct: 166 GASTILGFMKTKDLPVTEAVFSALVTGHARSGDMENAENILTVMKEAGIEPGPDTYLALL 225
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +S+L+L
Sbjct: 226 NAYAEKGDIDHVKQTLEKVE-KSDLYL 251
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M + ++P+ TY +L+ Y GD++ +L + + + + +
Sbjct: 131 SPTDFLAKMEKGNVQPNRVTYQRLIAAYCNMGDIEGASTILGFMKTK--DLPVTEAVFSA 188
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 189 LVTGHARSGDMENA----ENIL------TVMKEAGIEPGPDTYLALLNAYAEKGDIDHVK 238
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ KI Y D N I L+
Sbjct: 239 QTLEKVEKSDLYLMDRDLLQIILSFSKAGYPQYVPEILEKITYERRYIPDTMNLILLLVT 298
Query: 424 KGQIDAAYRIV--NTLARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +I+ ++R +++N G F +RH V N P
Sbjct: 299 EKLEDTALQILLACPISRESSLND----FGSFFLRHCVTVNTP 337
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M + ++P+ TY +L+ Y GD++ T + +K
Sbjct: 116 YNALLKVYLQNEHKFSPTDFLAKMEKGNVQPNRVTYQRLIAAYCNMGDIEGASTILGFMK 175
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T S DM +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 176 TKDLPVTEA--VFSALVTGHA--RSGDMENAENILTVMKEAGIEPGPDTYLALLNAYAEK 231
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+
Sbjct: 232 GDIDHVKQTLEKVEKSDLYLMDRDLLQIILSFSKAGYPQYVPEI 275
>gi|426223751|ref|XP_004006037.1| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Ovis aries]
Length = 1391
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/147 (52%), Positives = 108/147 (73%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL N+H FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 162 DVSHYNALLKVYLQNDHKFSPTDFLAKMEKGNIQPNRVTYQ------RLIAAYCNMGDIE 215
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+ IL FM+ K P++E VF+AL+ GH+++ DM +AE ILT+M +AG+EP TY L+
Sbjct: 216 GASTILGFMKTKDLPVTEAVFSALVTGHARSGDMENAENILTVMKEAGIEPGPDTYLALL 275
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +S+L+L
Sbjct: 276 NAYAEKGDIDHVKQTLEKVE-KSDLYL 301
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M + ++P+ TY +L+ Y GD++ +L + + + + +
Sbjct: 181 SPTDFLAKMEKGNIQPNRVTYQRLIAAYCNMGDIEGASTILGFMKTK--DLPVTEAVFSA 238
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A NI +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 239 LVTGHARSGDMENA----ENIL------TVMKEAGIEPGPDTYLALLNAYAEKGDIDHVK 288
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ KI Y D N I L+
Sbjct: 289 QTLEKVEKSDLYLMDRDLLQIILSFSKAGYPQYVPEILEKITYERRYIPDTMNLILLLVT 348
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG 465
+ D A +I+ LA + Q G F +RH V N P
Sbjct: 349 EKLEDTALQIL--LACPISRESSQNDFGSFFLRHCVTMNTPA 388
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q + S L M + ++P+ TY +L+ Y GD++ T + +K
Sbjct: 166 YNALLKVYLQNDHKFSPTDFLAKMEKGNIQPNRVTYQRLIAAYCNMGDIEGASTILGFMK 225
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T S DM +AE ILT+M +AG+EP TY L+ YA+
Sbjct: 226 TKDLPVTEA--VFSALVTGHA--RSGDMENAENILTVMKEAGIEPGPDTYLALLNAYAEK 281
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V++ L + S L++ D L II + + +G+ +Y+ E+
Sbjct: 282 GDIDHVKQTLEKVEKSDLYLMDRDLLQIILSFSKAGYPQYVPEI 325
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ ++ K+D A+E+ C +++ P ++L + I+ + +Q+ D + GE
Sbjct: 826 LVTLYLEKDDLPAALESTIDCYEKYKILPRIHDVLCKLIEKGETELIQKAMDFVSQEQGE 885
Query: 608 VNSLYDLMLSFL 619
+ LYDL +FL
Sbjct: 886 MTMLYDLFFAFL 897
>gi|224047221|ref|XP_002193603.1| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Taeniopygia guttata]
Length = 1336
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 102/142 (71%), Gaps = 6/142 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL D SHYNALL+VYL NEH FSPT+FLA++E ++PNRVTYQ +LI+ YC
Sbjct: 105 ELGAVYDTSHYNALLKVYLQNEHKFSPTEFLARMEEANVQPNRVTYQ------RLIAAYC 158
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+G+IEGA+KIL FM+ K PI+E VF++L+ GH+++ DM SAE IL++M AG+EP
Sbjct: 159 NEGDIEGASKILGFMKSKDLPITEAVFSSLVKGHARSGDMKSAENILSVMRMAGVEPGPD 218
Query: 196 TYTKLMCGYAKHGDMDSIKTKI 217
TY L+ YA+ GD DSIK +
Sbjct: 219 TYLSLLNVYAEKGDADSIKKTL 240
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL---A 307
L M +A ++P+ TY +L+ Y GD++ ++L + L I A+
Sbjct: 134 FLARMEEANVQPNRVTYQRLIAAYCNEGDIEGASKILG-----FMKSKDLPITEAVFSSL 188
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
V GH D SA NI +M AG+EP TY L+ YA+ GD DSI++
Sbjct: 189 VKGHARSGDMKSA----ENIL------SVMRMAGVEPGPDTYLSLLNVYAEKGDADSIKK 238
Query: 368 LLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINK 424
L Q ++ L++ + +I +LA +G+ ++I++I +I+ D N LI
Sbjct: 239 TLEQVENTEGYLMDRILVQVIFSLAKAGYPQHIEDIKGRIRFERELIPDVINLCLTLITH 298
Query: 425 GQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
G D ++ I+ +L ++++ E + G F ++H V + P
Sbjct: 299 GFEDISFNILKSL---SHLSREDMDQGSFFLQHCVNRDLP 335
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 17/182 (9%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 115 YNALLKVYLQNEHKFSPTEFLARMEEANVQPNRVTYQRLIAAYCNEGDIEGASKILGFMK 174
Query: 222 PQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ L + + + L+ S DM SAE IL++M AG+EP TY L+ YA+ G
Sbjct: 175 SKD---LPITEAVFSSLVKGHARSGDMKSAENILSVMRMAGVEPGPDTYLSLLNVYAEKG 231
Query: 279 DMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEVSAIVCF--------VNI 327
D DS+++ L Q ++ L++ + +I +LA +G+ ++I+++ + F +N+
Sbjct: 232 DADSIKKTLEQVENTEGYLMDRILVQVIFSLAKAGYPQHIEDIKGRIRFERELIPDVINL 291
Query: 328 CF 329
C
Sbjct: 292 CL 293
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 546 AVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIH 605
A LI H+ K+D A+E F C ++ + + ++ DA LQ+++D + +
Sbjct: 778 APLITVHLEKDDMPAALEAFISCYKKYGKILQLHNICCKLVEKGDADLLQKVSDFISREY 837
Query: 606 GEVNSLYDLMLSFL 619
G++ +LYDL +FL
Sbjct: 838 GDMMALYDLFFAFL 851
>gi|327278699|ref|XP_003224098.1| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like [Anolis carolinensis]
Length = 1363
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 107/162 (66%), Gaps = 11/162 (6%)
Query: 58 SLGPGNLPCEDPFSVHT-----GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ 112
SL P P E HT EL V D+SHYNALL+VYL NEH FSPT+FL K+E
Sbjct: 88 SLLPELCPTERTELGHTMWNRLKELGVVYDVSHYNALLKVYLQNEHNFSPTEFLTKMEEA 147
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
++PNRVTYQ +LI+ YC G+IEGA+KIL FM+ K PI+E VF+AL+ GH++A
Sbjct: 148 NVQPNRVTYQ------RLIAAYCNKGDIEGASKILGFMKSKELPITESVFSALVTGHARA 201
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
DM +AE IL++M AG+EP TY L+ YA+ GD+ I+
Sbjct: 202 GDMDNAENILSVMRDAGIEPGPDTYVALVKAYAEKGDLSKIE 243
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 17/220 (7%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
LT M +A ++P+ TY +L+ Y GD++ ++L S + + + + V+G
Sbjct: 140 FLTKMEEANVQPNRVTYQRLIAAYCNKGDIEGASKILGFMKSKEL--PITESVFSALVTG 197
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL- 369
H D +A NI +M AG+EP TY L+ YA+ GD+ I L
Sbjct: 198 HARAGDMDNA----ENIL------SVMRDAGIEPGPDTYVALVKAYAEKGDLSKIEETLG 247
Query: 370 --AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQI 427
A+ S L++ D +DII LA +GH +Y+ I+ K++ GY DA N LI +G
Sbjct: 248 NIAKTDSYLLDRDLMDIIFTLAKAGHSQYVPNILDKMRYDRGYIPDAMNLCLTLITQGLE 307
Query: 428 DAAYRIVNTLARSA--NINGEQLPVGGFLVRHMVKTNQPG 465
D A++++ + S+ + N L G F +RH V T++P
Sbjct: 308 DTAFQVLKSFPSSSFDSQNEYGLDRGNFFLRHCVNTDKPA 347
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 9/160 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S LT M +A ++P+ TY +L+ Y GD++ +KI
Sbjct: 121 YNALLKVYLQNEHNFSPTEFLTKMEEANVQPNRVTYQRLIAAYCNKGDIEGA-SKILGFM 179
Query: 222 PQSELFL---CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
EL + FS +T + DM +AE IL++M AG+EP TY L+ YA+ G
Sbjct: 180 KSKELPITESVFSALVTGHA--RAGDMDNAENILSVMRDAGIEPGPDTYVALVKAYAEKG 237
Query: 279 DMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYI 315
D+ + L A++ S L++ D +DII LA +GH +Y+
Sbjct: 238 DLSKIEETLGNIAKTDSYLLDRDLMDIIFTLAKAGHSQYV 277
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
LI AH+ K+D A+E C ++ P ++L + I+ + LQ+ D GE
Sbjct: 792 LITAHLEKDDLAAALEAVFDCCKKYDKLPRLHDILCKLIEKGNTELLQKAMDFLNQERGE 851
Query: 608 VNSLYDLMLSFL 619
+ LYDL +FL
Sbjct: 852 MTMLYDLFFAFL 863
>gi|34785887|gb|AAH57718.1| LOC398720 protein, partial [Xenopus laevis]
Length = 287
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 108/146 (73%), Gaps = 6/146 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL D+SHYNALL+VYL NE FSPT++L+K+E+ ++PNRVTYQ +LI+ YC
Sbjct: 139 ELGAVFDVSHYNALLKVYLQNEQKFSPTEYLSKMEAANVQPNRVTYQ------RLIAAYC 192
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+G+IEGA+KIL FM++K PI+E VFN L+ GH++A DM +A+ IL++M AG+EP +
Sbjct: 193 NEGDIEGASKILGFMKNKDLPITEAVFNTLVTGHARAGDMGNAKNILSVMRSAGIEPGPE 252
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLK 221
TY L+ +A+ GD+++IK + +++
Sbjct: 253 TYVALLTAFAEKGDINNIKETLENVE 278
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 6/129 (4%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L+ M A ++P+ TY +L+ Y GD++ + +K
Sbjct: 149 YNALLKVYLQNEQKFSPTEYLSKMEAANVQPNRVTYQRLIAAYCNEGDIEGASKILGFMK 208
Query: 222 PQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ L + + N L+ + DM +A+ IL++M AG+EP +TY L+ +A+ G
Sbjct: 209 NKD---LPITEAVFNTLVTGHARAGDMGNAKNILSVMRSAGIEPGPETYVALLTAFAEKG 265
Query: 279 DMDSVRRLL 287
D+++++ L
Sbjct: 266 DINNIKETL 274
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 18/121 (14%)
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL---AV 308
L+ M A ++P+ TY +L+ Y GD++ ++L + N D L I A+ V
Sbjct: 169 LSKMEAANVQPNRVTYQRLIAAYCNEGDIEGASKILG----FMKNKD-LPITEAVFNTLV 223
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
+GH D +A NI +M AG+EP +TY L+ +A+ GD+++I+
Sbjct: 224 TGHARAGDMGNA----KNIL------SVMRSAGIEPGPETYVALLTAFAEKGDINNIKET 273
Query: 369 L 369
L
Sbjct: 274 L 274
>gi|355699843|gb|AES01256.1| leucine-rich PPR-motif containing [Mustela putorius furo]
Length = 1252
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 108/147 (73%), Gaps = 7/147 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 20 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIAAYCNVGDIE 73
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+KIL FM+ K P++E VF+AL+ GH++A D+ +AE I ++M +AG+EP TY L+
Sbjct: 74 GASKILGFMKTKDLPVTEAVFSALVTGHARAGDIENAENIFSVMKEAGIEPGPDTYLALL 133
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +S+L+L
Sbjct: 134 NAYAEKGDIDHVKQTLEKVE-KSDLYL 159
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 17/222 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ ++L + + + + +
Sbjct: 39 SPTDFLAKMEEANIQPNRVTYQRLIAAYCNVGDIEGASKILGFMKTK--DLPVTEAVFSA 96
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH D +A F +M +AG+EP TY L+ YA+ GD+D ++
Sbjct: 97 LVTGHARAGDIENAENIF----------SVMKEAGIEPGPDTYLALLNAYAEKGDIDHVK 146
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +++ EI+ KI Y DA N I L+
Sbjct: 147 QTLEKVEKSDLYLMDRDLLQIIFSFSKAGYSQHVPEILEKITYERRYIPDAMNLILLLVT 206
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG 465
+ D A++I+ LA + G G F +RH V + P
Sbjct: 207 EKLEDTAFQIL--LACPVSREGSLSDFGSFFLRHCVTMDTPA 246
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 86/164 (52%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 24 YNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQRLIAAYCNVGDIEGASKILGFMK 83
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + D+ +AE I ++M +AG+EP TY L+ YA+
Sbjct: 84 TKDLPVTEA--VFSALVTGHA--RAGDIENAENIFSVMKEAGIEPGPDTYLALLNAYAEK 139
Query: 278 GDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
GD+D V++ L + S L++ D L II + + +G+ +++ E+
Sbjct: 140 GDIDHVKQTLEKVEKSDLYLMDRDLLQIIFSFSKAGYSQHVPEI 183
>gi|348501854|ref|XP_003438484.1| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like [Oreochromis niloticus]
Length = 1422
Score = 163 bits (413), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 104/142 (73%), Gaps = 6/142 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL D+SHYNALL+VYL NE FSPTDFLAK+E+ I+PNRVTYQ +LI+ YC
Sbjct: 167 ELGAQYDVSHYNALLKVYLQNEFKFSPTDFLAKMEAANIQPNRVTYQ------RLIAAYC 220
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
Q+G+IEGA+ IL FM+ K PI+E VF++L+ GH++A D+ SA+ IL++M AG+EP
Sbjct: 221 QNGDIEGASTILGFMKSKDLPITEAVFSSLVTGHARAGDIESAKNILSVMGGAGIEPGPD 280
Query: 196 TYTKLMCGYAKHGDMDSIKTKI 217
TY L+ YA+ GD++++K +
Sbjct: 281 TYVSLLNAYAEKGDLENMKKTL 302
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 22/220 (10%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M A ++P+ TY +L+ Y ++GD++ +L + L I A+
Sbjct: 192 SPTDFLAKMEAANIQPNRVTYQRLIAAYCQNGDIEGASTILG-----FMKSKDLPITEAV 246
Query: 307 ---AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
V+GH D SA NI +M AG+EP TY L+ YA+ GD++
Sbjct: 247 FSSLVTGHARAGDIESA----KNIL------SVMGGAGIEPGPDTYVSLLNAYAEKGDLE 296
Query: 364 SIRRLLAQNGS---SLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH 420
++++ L S SL++ D + +I LA S H ++I E++ +++ GY DA N
Sbjct: 297 NMKKTLEAADSADCSLMDRDIMQVIFTLAKSKHQQHIPEMVERLRHERGYVPDAMNLCLS 356
Query: 421 LINKGQIDAAYRIVNTLARSANIN-GEQLPVGGFLVRHMV 459
LI +GQ D A+ I+ T + N + +G F +RH +
Sbjct: 357 LITQGQEDTAFHILKTFPTLQSDNSSDSANLGNFFLRHCI 396
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M A ++P+ TY +L+ Y ++GD++ T + +K
Sbjct: 177 YNALLKVYLQNEFKFSPTDFLAKMEAANIQPNRVTYQRLIAAYCQNGDIEGASTILGFMK 236
Query: 222 ----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P +E FS +T + D+ SA+ IL++M AG+EP TY L+ YA+
Sbjct: 237 SKDLPITEA--VFSSLVTGHA--RAGDIESAKNILSVMGGAGIEPGPDTYVSLLNAYAEK 292
Query: 278 GDMDSVRRLLAQSGS---SLVNGDYLDIIHALAVSGHGEYIDEV 318
GD++++++ L + S SL++ D + +I LA S H ++I E+
Sbjct: 293 GDLENMKKTLEAADSADCSLMDRDIMQVIFTLAKSKHQQHIPEM 336
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 42/82 (51%)
Query: 538 LHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRI 597
+ P A + ++ A+++ +D +GA+E C ++ P +++ ++ + LQ+
Sbjct: 842 VKPTANLCSPVVTAYLVSKDVSGALEAALECQKRYNHLPRIHDIIVALVEKGETELLQKA 901
Query: 598 TDLSTSIHGEVNSLYDLMLSFL 619
D + GE+ LYDL+ FL
Sbjct: 902 MDFVSQERGEMTMLYDLLFGFL 923
>gi|363731790|ref|XP_001234903.2| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Gallus gallus]
Length = 1370
Score = 163 bits (412), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 102/142 (71%), Gaps = 6/142 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL D SHYNALL+VYL NEH FSPT+FLA++E ++PNRVTYQ +LI+ YC
Sbjct: 138 ELGAVYDTSHYNALLKVYLQNEHKFSPTEFLARMEEANVQPNRVTYQ------RLIAAYC 191
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+G+IEGA+KIL FM+ K PI+E VF++L+ GH+++ D+ SAE IL++M AG+EP
Sbjct: 192 NEGDIEGASKILGFMKSKDLPITEAVFSSLVKGHARSGDIKSAENILSVMRMAGVEPGPD 251
Query: 196 TYTKLMCGYAKHGDMDSIKTKI 217
TY L+ YA+ GD DSIK +
Sbjct: 252 TYLSLLNVYAEKGDADSIKKTL 273
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 103/220 (46%), Gaps = 24/220 (10%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL---A 307
L M +A ++P+ TY +L+ Y GD++ ++L + L I A+
Sbjct: 167 FLARMEEANVQPNRVTYQRLIAAYCNEGDIEGASKILG-----FMKSKDLPITEAVFSSL 221
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
V GH D SA NI +M AG+EP TY L+ YA+ GD DSI++
Sbjct: 222 VKGHARSGDIKSA----ENIL------SVMRMAGVEPGPDTYLSLLNVYAEKGDADSIKK 271
Query: 368 LLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINK 424
L + + L++ + +I +LA +G+ +YI++I +++ D N LI
Sbjct: 272 TLEEVEKTEGYLMDRVLMQVIFSLAKAGYPQYIEDIKERMRFEKELIPDMMNLCLTLITH 331
Query: 425 GQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
G D ++RI+ + + N +Q G F ++H V N P
Sbjct: 332 GFEDISFRILKSYNHLSRENVDQ---GSFFLQHCVNRNMP 368
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 148 YNALLKVYLQNEHKFSPTEFLARMEEANVQPNRVTYQRLIAAYCNEGDIEGASKILGFMK 207
Query: 222 PQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ L + + + L+ S D+ SAE IL++M AG+EP TY L+ YA+ G
Sbjct: 208 SKD---LPITEAVFSSLVKGHARSGDIKSAENILSVMRMAGVEPGPDTYLSLLNVYAEKG 264
Query: 279 DMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEVSAIVCF--------VNI 327
D DS+++ L + + L++ + +I +LA +G+ +YI+++ + F +N+
Sbjct: 265 DADSIKKTLEEVEKTEGYLMDRVLMQVIFSLAKAGYPQYIEDIKERMRFEKELIPDMMNL 324
Query: 328 CF 329
C
Sbjct: 325 CL 326
>gi|326915306|ref|XP_003203960.1| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like [Meleagris gallopavo]
Length = 1310
Score = 162 bits (409), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 102/142 (71%), Gaps = 6/142 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL D SHYNALL+VYL NEH FSPT+FLA++E ++PNRVTYQ +LI+ YC
Sbjct: 137 ELGAVYDTSHYNALLKVYLQNEHKFSPTEFLARMEEANVQPNRVTYQ------RLIAAYC 190
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+G+IEGA+KIL FM+ K PI+E VF++L+ GH+++ D+ SAE IL++M AG+EP
Sbjct: 191 NEGDIEGASKILGFMKSKDLPITEAVFSSLVKGHARSGDIKSAENILSVMRVAGVEPGPD 250
Query: 196 TYTKLMCGYAKHGDMDSIKTKI 217
TY L+ YA+ GD DSIK +
Sbjct: 251 TYLSLLNVYAEKGDADSIKKTL 272
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
L M +A ++P+ TY +L+ Y GD++ ++L S + + + + V G
Sbjct: 166 FLARMEEANVQPNRVTYQRLIAAYCNEGDIEGASKILGFMKSK--DLPITEAVFSSLVKG 223
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
H D SA NI +M AG+EP TY L+ YA+ GD DSI++ L
Sbjct: 224 HARSGDIKSA----ENIL------SVMRVAGVEPGPDTYLSLLNVYAEKGDADSIKKTLE 273
Query: 371 Q---NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQI 427
+ G L++ + +I +LA +G+ +YI++I +I+ D N LI G
Sbjct: 274 EVEKTGGYLMDRVLMQVIFSLAKAGYPQYIEDIKERIRFEKELIPDMMNLCLTLITHGFE 333
Query: 428 DAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
D ++RI+ + + N +Q G F ++H V N P
Sbjct: 334 DISFRILKSYNHLSRENVDQ---GSFFLQHCVNRNMP 367
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 94/182 (51%), Gaps = 17/182 (9%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S L M +A ++P+ TY +L+ Y GD++ + +K
Sbjct: 147 YNALLKVYLQNEHKFSPTEFLARMEEANVQPNRVTYQRLIAAYCNEGDIEGASKILGFMK 206
Query: 222 PQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ L + + + L+ S D+ SAE IL++M AG+EP TY L+ YA+ G
Sbjct: 207 SKD---LPITEAVFSSLVKGHARSGDIKSAENILSVMRVAGVEPGPDTYLSLLNVYAEKG 263
Query: 279 DMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF--------VNI 327
D DS+++ L + +G L++ + +I +LA +G+ +YI+++ + F +N+
Sbjct: 264 DADSIKKTLEEVEKTGGYLMDRVLMQVIFSLAKAGYPQYIEDIKERIRFEKELIPDMMNL 323
Query: 328 CF 329
C
Sbjct: 324 CL 325
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
LI H+ K+D A+E C + + R I+ D LQ+++D +S +G+
Sbjct: 812 LITVHLEKDDMPAALEALMDCYKKHGKILQLHNIYCRLIEKGDTELLQKVSDFISSEYGD 871
Query: 608 VNSLYDLMLSFL 619
+ +LYDL +FL
Sbjct: 872 MMALYDLFFAFL 883
>gi|345310896|ref|XP_003429028.1| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like, partial [Ornithorhynchus anatinus]
Length = 290
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 100/139 (71%), Gaps = 6/139 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+L D SHYNALL+VYL NEH FSPTDFL K+E + PNRVTYQ +LI+ YC
Sbjct: 157 QLGTVFDASHYNALLKVYLQNEHKFSPTDFLTKMEGADVSPNRVTYQ------RLIAAYC 210
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
Q G+IEGA+K+L FM+ K P++E VF++L+ GH++A DM +AE IL++M +AG+EP
Sbjct: 211 QVGDIEGASKVLGFMKTKDLPVTEAVFSSLVTGHARAGDMKNAENILSVMQEAGIEPGPD 270
Query: 196 TYTKLMCGYAKHGDMDSIK 214
TY L+ YA+ GD++ IK
Sbjct: 271 TYLALLKAYAERGDIEHIK 289
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 38/210 (18%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRD-----KTFPISEG 160
LAKL++ R+T L ++ + C+ GN G+ + L +R P SE
Sbjct: 89 LAKLDNSVRRTGRITKNLL---QRIFTNICKSGN-PGSNQALLLLRSCGSLLPELPPSER 144
Query: 161 V---------------------FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+NAL+ + Q S LT M A + P+ TY +
Sbjct: 145 TEFAHQIWDRLRQLGTVFDASHYNALLKVYLQNEHKFSPTDFLTKMEGADVSPNRVTYQR 204
Query: 200 LMCGYAKHGDMDSIKTKIPSLK----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
L+ Y + GD++ + +K P +E FS +T + DM +AE IL++M
Sbjct: 205 LIAAYCQVGDIEGASKVLGFMKTKDLPVTEA--VFSSLVTGHA--RAGDMKNAENILSVM 260
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
+AG+EP TY L+ YA+ GD++ ++R
Sbjct: 261 QEAGIEPGPDTYLALLKAYAERGDIEHIKR 290
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 18/124 (14%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S LT M A + P+ TY +L+ Y + GD++ ++L + L + A+
Sbjct: 182 SPTDFLTKMEGADVSPNRVTYQRLIAAYCQVGDIEGASKVLG-----FMKTKDLPVTEAV 236
Query: 307 ---AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
V+GH D +A NI +M +AG+EP TY L+ YA+ GD++
Sbjct: 237 FSSLVTGHARAGDMKNA----ENIL------SVMQEAGIEPGPDTYLALLKAYAERGDIE 286
Query: 364 SIRR 367
I+R
Sbjct: 287 HIKR 290
>gi|345484671|ref|XP_001602390.2| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like [Nasonia vitripennis]
Length = 1339
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 115/174 (66%), Gaps = 8/174 (4%)
Query: 54 CSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQG 113
CSE SL ++ + TG L + LDISHYNALL + L+NE FSP D L +L+ +
Sbjct: 120 CSE-SLQTRQALVKNVWDTITG-LGLQLDISHYNALLLINLENETDFSPLDILVELKEKN 177
Query: 114 IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
I+PNRVT+Q +LI +YC G+I GATKILE M + PI+E +FN+LI GHS+A
Sbjct: 178 IQPNRVTFQ------RLIEQYCNKGDIAGATKILEHMSAQEIPINEVIFNSLIKGHSEAG 231
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
D+ SA IL +M QAG+EPS+++YT ++C +AK GD+++I+ + K + L
Sbjct: 232 DVQSAVKILEIMKQAGIEPSSRSYTAVLCTHAKSGDIEAIRNTLNDCKEKDILL 285
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 154/309 (49%), Gaps = 36/309 (11%)
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM---DSIKTKIPSLKPQ 223
+G+ ND+ E +L +++ G + Q + C GD +S++T+ +K
Sbjct: 82 FGNIYKNDV---EDLLQAVTEKGSITTTQALLMIRCC----GDFLCSESLQTRQALVKNV 134
Query: 224 SELFLCFSFQLT----NLLILVS----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
+ QL N L+L++ +D + + IL + + ++P+ T+ +L+ Y
Sbjct: 135 WDTITGLGLQLDISHYNALLLINLENETDFSPLD-ILVELKEKNIQPNRVTFQRLIEQYC 193
Query: 276 KHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
GD+ ++L + + + ++I + GH E D SA+
Sbjct: 194 NKGDIAGATKILEHMSAQEIPIN--EVIFNSLIKGHSEAGDVQSAVKIL----------E 241
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL---AQNGSSLVNGDYLDIIHALAVSG 392
+M QAG+EPS+++YT ++C +AK GD+++IR L + L N + L++I+ LA++
Sbjct: 242 IMKQAGIEPSSRSYTAVLCTHAKSGDIEAIRNTLNDCKEKDILLANKEILEVIYTLALNK 301
Query: 393 HGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARS--ANINGEQLPV 450
E+IDEI+S + G Y+ +A IY LI K +I+ A++++ +L ++ E+
Sbjct: 302 QLEHIDEIMSLLLKGSTYNREAIPFIYKLIEKNRIETAFKLLKSLVKNPLRQSEDEKTDS 361
Query: 451 GGFLVRHMV 459
G F +R +V
Sbjct: 362 GQFFIRKLV 370
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 517 VKTNQPIDKVLAVCHRLTDENLHPRAFN--LAVLIKAHVLKEDYTGAVETFEYCVNQFRA 574
VK N P D++ + L D + L LI+A + D T A+E F + F+
Sbjct: 796 VKKNSP-DRIDEFFNVLNDRRFFSKVTVSLLGSLIRAPLDSGDTTKAIEKFRWACENFKL 854
Query: 575 TPWKGELLKRFIQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDA 621
TP + L+ + I EDA LQ +TDL T I+GE+N+L+DL ++F D
Sbjct: 855 TPQRNILMMKLINDEDAKSLQYVTDLCTQIYGEMNALFDLAIAFFDC 901
>gi|242002832|ref|XP_002436059.1| pentatricopeptide repeat-containing protein, putative [Ixodes
scapularis]
gi|215499395|gb|EEC08889.1| pentatricopeptide repeat-containing protein, putative [Ixodes
scapularis]
Length = 1190
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 107/144 (74%), Gaps = 7/144 (4%)
Query: 85 HYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
HYNALL+VYL+NE FSPT+FLA +E GI+ NRVTYQ +LI ++CQ+G+I GA+
Sbjct: 87 HYNALLQVYLENELKFSPTEFLATMEKAGIQANRVTYQ------RLIHRFCQEGDISGAS 140
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
KILE M+ + PI+E VFN+L+ GH++ANDM +A+ IL +M A LEP+A TY L+ G+
Sbjct: 141 KILEHMKSQDLPINEKVFNSLVMGHARANDMENAKNILDVMRNAHLEPTADTYFALLRGH 200
Query: 205 AKHGDMDSIKTKIPSLKPQSELFL 228
A+ GD++S+ + L+ ++E+FL
Sbjct: 201 AERGDVESMNKVLQELE-RNEVFL 223
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 57/89 (64%)
Query: 540 PRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITD 599
P L L++ H+L++D A+ FE C ++ TP K EL +RFI+ ED+ LQR+ D
Sbjct: 766 PSTLVLGPLVRCHLLRDDLAQALSAFESCAKAYKHTPMKNELSRRFIEKEDSESLQRVVD 825
Query: 600 LSTSIHGEVNSLYDLMLSFLDAEVLRILQ 628
+ST +HGE+N+LYDLM FL+ +R Q
Sbjct: 826 ISTEVHGEMNTLYDLMSYFLECGHVRQAQ 854
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 25/219 (11%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS--LVNGDYLDIIHALAV 308
L M +AG++ + TY +L+ + + GD+ ++L S +N + + V
Sbjct: 107 FLATMEKAGIQANRVTYQRLIHRFCQEGDISGASKILEHMKSQDLPINEKVFNSL----V 162
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
GH D +A NI +M A LEP+A TY L+ G+A+ GD++S+ ++
Sbjct: 163 MGHARANDMENA----KNIL------DVMRNAHLEPTADTYFALLRGHAERGDVESMNKV 212
Query: 369 LAQ---NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
L + N L++ YL +++ LA SGH +++DE++ K + GY+ D N L+ G
Sbjct: 213 LQELERNEVFLLDDHYLGLVNVLACSGHKQHVDEVLGKTRRLAGYTQDCINTCMELLALG 272
Query: 426 QIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
D A+++ T+ + G F V +V++ P
Sbjct: 273 HDDVAHKVFLTMTSRLENH------GNFFVSQLVRSGAP 305
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 93/163 (57%), Gaps = 9/163 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + + S L M +AG++ + TY +L+ + + GD+ + +K
Sbjct: 88 YNALLQVYLENELKFSPTEFLATMEKAGIQANRVTYQRLIHRFCQEGDISGASKILEHMK 147
Query: 222 PQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
Q L + ++ N L++ ++DM +A+ IL +M A LEP+A TY L+ G+A+ G
Sbjct: 148 SQD---LPINEKVFNSLVMGHARANDMENAKNILDVMRNAHLEPTADTYFALLRGHAERG 204
Query: 279 DMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEV 318
D++S+ ++L + + L++ YL +++ LA SGH +++DEV
Sbjct: 205 DVESMNKVLQELERNEVFLLDDHYLGLVNVLACSGHKQHVDEV 247
>gi|387016706|gb|AFJ50472.1| Leucine-rich PPR motif-containing protein, mitochondrial [Crotalus
adamanteus]
Length = 1377
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 115/176 (65%), Gaps = 12/176 (6%)
Query: 58 SLGPGNLPCEDPFSVHT-----GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ 112
SL P LP E HT + V D+SHYNALL+VYL NEH FSP FL K+E
Sbjct: 129 SLLPELLPHERTALAHTMWTKLKDAGVVFDVSHYNALLKVYLQNEHDFSPDKFLTKMEEM 188
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
++PNRVTYQ +LI+ YC G+I+G++KIL M+ K PI+E +F+AL+ GH++A
Sbjct: 189 DVQPNRVTYQ------RLIAAYCNKGDIDGSSKILNIMKSKDLPITELIFSALVTGHAKA 242
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
DM +A IL++M +EP ++TY L+ YA+ GD++ I+ ++ +++ ++E++L
Sbjct: 243 GDMDNAINILSVMKDTKIEPGSETYLALLNAYAEKGDINRIEEELKNIE-KTEIYL 297
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 16/224 (7%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S + LT M + ++P+ TY +L+ Y GD+D ++L S + ++I +
Sbjct: 177 SPDKFLTKMEEMDVQPNRVTYQRLIAAYCNKGDIDGSSKILNIMKSK--DLPITELIFSA 234
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH + D +AI NI +M +EP ++TY L+ YA+ GD++ I
Sbjct: 235 LVTGHAKAGDMDNAI----NIL------SVMKDTKIEPGSETYLALLNAYAEKGDINRIE 284
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
L + L D +DII LA +G+ +YI ++ KI+ D N LI
Sbjct: 285 EELKNIEKTEIYLSERDSMDIIFTLAKAGYPQYIQNLLEKIKFSKESIPDVKNLCLRLIT 344
Query: 424 KGQIDAAYRIVNTLARSANINGEQL-PVGGFLVRHMVKTNQPGV 466
D A++++ ++ + + E+ F ++H + P V
Sbjct: 345 FNLEDTAFQVLQSVFVALGLTYEKHNNQCNFFLQHCINMEMPLV 388
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + Q S + LT M + ++P+ TY +L+ Y GD+D +KI ++
Sbjct: 162 YNALLKVYLQNEHDFSPDKFLTKMEEMDVQPNRVTYQRLIAAYCNKGDIDG-SSKILNIM 220
Query: 222 PQSEL---FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+L L FS +T + DM +A IL++M +EP ++TY L+ YA+ G
Sbjct: 221 KSKDLPITELIFSALVTGHA--KAGDMDNAINILSVMKDTKIEPGSETYLALLNAYAEKG 278
Query: 279 DMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEVSAIVCF 324
D++ + L + L D +DII LA +G+ +YI + + F
Sbjct: 279 DINRIEEELKNIEKTEIYLSERDSMDIIFTLAKAGYPQYIQNLLEKIKF 327
>gi|427793629|gb|JAA62266.1| Putative leucine-rich ppr-motif protein, partial [Rhipicephalus
pulchellus]
Length = 1338
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 93/138 (67%), Gaps = 6/138 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L PLD SHYNALL+VYL+NE F P+ FLA +E+ ++PNRVT+Q +LI +YCQ
Sbjct: 171 LGCPLDASHYNALLQVYLENEFPFCPSTFLATMEAASVQPNRVTFQ------RLIHRYCQ 224
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+I GA+KILE M+ + I+E VFN+L+ GH +A D +A +L +M A LEP+A T
Sbjct: 225 QGDIAGASKILEHMKSQDMAINERVFNSLVLGHCRAGDTENAWNVLEVMRNAQLEPTADT 284
Query: 197 YTKLMCGYAKHGDMDSIK 214
+ L+ G A+ GD ++
Sbjct: 285 FHALLVGCAERGDQAGLE 302
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 125/586 (21%), Positives = 214/586 (36%), Gaps = 137/586 (23%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAV 308
L M A ++P+ T+ +L+ Y + GD+ ++L +S +N + + V
Sbjct: 199 FLATMEAASVQPNRVTFQRLIHRYCQQGDIAGASKILEHMKSQDMAINERVFNSL----V 254
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
GH D +A W +M A LEP+A T+ L+ G A+ GD + R
Sbjct: 255 LGHCRAGDTENA----------WNVLEVMRNAQLEPTADTFHALLVGCAERGDQAGLERA 304
Query: 369 LAQNG---SSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
+ + L + LD++ LA +GH G
Sbjct: 305 FREADRVETFLPDELLLDVVRVLACAGH------------------------------HG 334
Query: 426 QIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQI 485
ID LA GY+ D N L+ +GQ
Sbjct: 335 MIDMVLERTRRLA----------------------------GYTQDCINVCLQLLAQGQD 366
Query: 486 DAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNL 545
+ AYR++ T+ N G F V MV+ P++++L C L L+ RA
Sbjct: 367 EVAYRMLLTMESPRNEFH-----GNFFVSQMVRRGLPLERILHYCKDLQSRGLNSRAL-- 419
Query: 546 AVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIH 605
V E ++ R T LL+ Q L +
Sbjct: 420 ----------------VRCAEVALSNHR-TELALPLLREMHQQGMPLRTHYFYPLVLAQG 462
Query: 606 GEVNSLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQL 665
+YD++ S L E GV N + L +YV P ++ + + V +L
Sbjct: 463 NNEQGVYDVLKSML-------------ELGVDINYDLLAEYVFPAVNTED--TAAVVEKL 507
Query: 666 RSVGVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSL 725
+ +G+++ SI + V++ L+ HNL +A +A+ + + V+ P L Y T+
Sbjct: 508 KGLGLSVSSIVNPLVLYHLQAHNLDKALAVAEQYPVNLVASVLVPSLTACYRETRQAVPA 567
Query: 726 VTVVRAVCENWEKGEEGEKEEEGEEKTAGQLIDMDRIFAGNVLLDIYKATRQDPNVVSHL 785
V ++ A+ +G E TA D +AG L + D L
Sbjct: 568 VKLLSAIL-------------QGPESTATGTSRTD--WAGKFLTECLVEPPAD------L 606
Query: 786 EQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDL 831
L+ + + + IS ++D ++ G +L I L ++++ L
Sbjct: 607 SNLIPELLANKVHISRSAADTLRTRHGQSLGGSILDMLDQISAEKL 652
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Query: 508 VGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEY 567
+ L+ + + P+++ L + L + P + L L++AH++KED GA++ FE
Sbjct: 803 IAARLLTALAEQGGPVERALQLL--LERCWVTPSSTLLGPLVRAHLVKEDVPGALKAFEE 860
Query: 568 CVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLRIL 627
C Q+R TP KGEL ++ I + LQ++ D+ST +HGE N+L+DL FL+ +R
Sbjct: 861 CARQYRLTPLKGELSRQLINQGRSEELQKVVDISTEVHGEANTLFDLTAYFLECGHVRQA 920
Query: 628 Q 628
Q
Sbjct: 921 Q 921
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A + E ++ P+ +NAL+ + + L M A ++P+ T+ +L
Sbjct: 159 ELARAVWEQLQSLGCPLDASHYNALLQVYLENEFPFCPSTFLATMEAASVQPNRVTFQRL 218
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQ 257
+ Y + GD+ + +K Q + + ++ N L+L + D +A +L +M
Sbjct: 219 IHRYCQQGDIAGASKILEHMKSQD---MAINERVFNSLVLGHCRAGDTENAWNVLEVMRN 275
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG---SSLVNGDYLDIIHALAVSGHGEY 314
A LEP+A T+ L+ G A+ GD + R ++ + L + LD++ LA +GH
Sbjct: 276 AQLEPTADTFHALLVGCAERGDQAGLERAFREADRVETFLPDELLLDVVRVLACAGHHGM 335
Query: 315 IDEV 318
ID V
Sbjct: 336 IDMV 339
>gi|427793531|gb|JAA62217.1| Putative leucine-rich ppr-motif protein, partial [Rhipicephalus
pulchellus]
Length = 1338
Score = 140 bits (353), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 93/138 (67%), Gaps = 6/138 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L PLD SHYNALL+VYL+NE F P+ FLA +E+ ++PNRVT+Q +LI +YCQ
Sbjct: 171 LGCPLDASHYNALLQVYLENEFPFCPSTFLATMEAASVQPNRVTFQ------RLIHRYCQ 224
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+I GA+KILE M+ + I+E VFN+L+ GH +A D +A +L +M A LEP+A T
Sbjct: 225 QGDIAGASKILEHMKSQDMAINERVFNSLVLGHCRAGDTENAWNVLEVMRNAQLEPTADT 284
Query: 197 YTKLMCGYAKHGDMDSIK 214
+ L+ G A+ GD ++
Sbjct: 285 FHALLVGCAERGDQAGLE 302
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 125/586 (21%), Positives = 212/586 (36%), Gaps = 137/586 (23%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAV 308
L M A ++P+ T+ +L+ Y + GD+ ++L +S +N + + V
Sbjct: 199 FLATMEAASVQPNRVTFQRLIHRYCQQGDIAGASKILEHMKSQDMAINERVFNSL----V 254
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
GH D +A W +M A LEP+A T+ L+ G A+ GD + R
Sbjct: 255 LGHCRAGDTENA----------WNVLEVMRNAQLEPTADTFHALLVGCAERGDQAGLERA 304
Query: 369 LAQNG---SSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
+ + L + LD++ LA +GH G
Sbjct: 305 FREADRVETFLPDELLLDVVRVLACAGH------------------------------HG 334
Query: 426 QIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQI 485
ID LA GY+ D N L+ +GQ
Sbjct: 335 MIDMVLERTRRLA----------------------------GYTQDCINVCLQLLAQGQD 366
Query: 486 DAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNL 545
+ AYR++ T+ N G F V MV+ P++++L C L L+ RA
Sbjct: 367 EVAYRMLLTMESPRNEFH-----GNFFVSQMVRRGLPLERILHYCKDLQSRGLNSRAL-- 419
Query: 546 AVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIH 605
V E ++ R T LL+ Q L +
Sbjct: 420 ----------------VRCAEVALSNHR-TELALPLLREMHQQGMPLRTHYFYPLVLAQG 462
Query: 606 GEVNSLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQL 665
+YD++ S L E GV N + L +YV P L+ + + V +L
Sbjct: 463 NNEQGVYDVLKSML-------------ELGVDINYDLLAEYVFPALNTED--TAAVVEKL 507
Query: 666 RSVGVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSL 725
+ +G++ SI + V++ L+ HNL +A + + + + V+ P L Y T+
Sbjct: 508 KGLGLSASSIVNPLVLYHLQAHNLDKALAVVEQYPVNLVASVLVPSLTACYRETRQAVPA 567
Query: 726 VTVVRAVCENWEKGEEGEKEEEGEEKTAGQLIDMDRIFAGNVLLDIYKATRQDPNVVSHL 785
V ++ A+ +G E TA D +AG L + D L
Sbjct: 568 VKLLSAIL-------------QGPESTATGTSRTD--WAGKFLTECLVEPPAD------L 606
Query: 786 EQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDL 831
L+ + + + IS ++D ++ G +L I L ++++ L
Sbjct: 607 SNLIPELLANKVHISRSAADTLRTRHGQSLGGSILDMLDQISAEKL 652
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 86/155 (55%), Gaps = 10/155 (6%)
Query: 481 NKGQIDAAYRIVNTLARSANINGE---QLP----VGGFLVRHMVKTNQPIDKVLAVCHRL 533
++G D A +++ + +I+G+ Q P + L+ + + P+++ L + L
Sbjct: 770 SRGHTDEALQLLEK-DQGRSIDGDRQTQQPGLDRIAARLLTALAEQGGPVERALQLL--L 826
Query: 534 TDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAAC 593
+ P + L L++AH++KED GA++ FE C Q+R TP KGEL ++ I +
Sbjct: 827 ERCWVTPSSTLLGPLVRAHLVKEDVPGALKAFEECARQYRLTPLKGELSRQLINQGRSEE 886
Query: 594 LQRITDLSTSIHGEVNSLYDLMLSFLDAEVLRILQ 628
LQ++ D+ST +HGE N+L+DL FL+ +R Q
Sbjct: 887 LQKVVDISTEVHGEANTLFDLTAYFLECGHVRQAQ 921
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A + E ++ P+ +NAL+ + + L M A ++P+ T+ +L
Sbjct: 159 ELARAVWEQLQSLGCPLDASHYNALLQVYLENEFPFCPSTFLATMEAASVQPNRVTFQRL 218
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQ 257
+ Y + GD+ + +K Q + + ++ N L+L + D +A +L +M
Sbjct: 219 IHRYCQQGDIAGASKILEHMKSQD---MAINERVFNSLVLGHCRAGDTENAWNVLEVMRN 275
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG---SSLVNGDYLDIIHALAVSGHGEY 314
A LEP+A T+ L+ G A+ GD + R ++ + L + LD++ LA +GH
Sbjct: 276 AQLEPTADTFHALLVGCAERGDQAGLERAFREADRVETFLPDELLLDVVRVLACAGHHGM 335
Query: 315 IDEV 318
ID V
Sbjct: 336 IDMV 339
>gi|427792353|gb|JAA61628.1| Putative leucine-rich ppr-motif protein, partial [Rhipicephalus
pulchellus]
Length = 1300
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 93/138 (67%), Gaps = 6/138 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L PLD SHYNALL+VYL+NE F P+ FLA +E+ ++PNRVT+Q +LI +YCQ
Sbjct: 133 LGCPLDASHYNALLQVYLENEFPFCPSTFLATMEAASVQPNRVTFQ------RLIHRYCQ 186
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G+I GA+KILE M+ + I+E VFN+L+ GH +A D +A +L +M A LEP+A T
Sbjct: 187 QGDIAGASKILEHMKSQDMAINERVFNSLVLGHCRAGDTENAWNVLEVMRNAQLEPTADT 246
Query: 197 YTKLMCGYAKHGDMDSIK 214
+ L+ G A+ GD ++
Sbjct: 247 FHALLVGCAERGDQAGLE 264
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 125/586 (21%), Positives = 213/586 (36%), Gaps = 137/586 (23%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAV 308
L M A ++P+ T+ +L+ Y + GD+ ++L +S +N + + V
Sbjct: 161 FLATMEAASVQPNRVTFQRLIHRYCQQGDIAGASKILEHMKSQDMAINERVFNSL----V 216
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
GH D +A W +M A LEP+A T+ L+ G A+ GD + R
Sbjct: 217 LGHCRAGDTENA----------WNVLEVMRNAQLEPTADTFHALLVGCAERGDQAGLERA 266
Query: 369 LAQNG---SSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
+ + L + LD++ LA +GH G
Sbjct: 267 FREADRVETFLPDELLLDVVRVLACAGH------------------------------HG 296
Query: 426 QIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQI 485
ID + LA GY+ D N L+ +GQ
Sbjct: 297 MIDMVLERLRRLA----------------------------GYTQDCINVCLQLLAQGQD 328
Query: 486 DAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNL 545
+ AYR++ T+ N G F V MV+ P++++L C L L+ RA
Sbjct: 329 EVAYRMLLTMESPRNEFH-----GNFFVSQMVRRGLPLERILHYCKDLQSRGLNSRAL-- 381
Query: 546 AVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIH 605
V E ++ R T LL+ Q L +
Sbjct: 382 ----------------VRCAEVALSNHR-TELALPLLREMHQQGMPLRTHYFYPLVLAQG 424
Query: 606 GEVNSLYDLMLSFLDAEVLRILQVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQL 665
+YD++ S L E GV N + L +YV P L+ + + V +L
Sbjct: 425 NNEQGVYDVLKSML-------------ELGVDINYDLLAEYVFPALNTED--TAAVVEKL 469
Query: 666 RSVGVTIGSITSAYVVHMLRQHNLKEAALLAKSFRAHYAKVVVRPVLAVSYLRTQDLPSL 725
+ +G++ SI + V++ L+ HNL +A + + + + V+ P L Y T+
Sbjct: 470 KGLGLSASSIVNPLVLYHLQAHNLDKALAVVEQYPVNLVASVLVPSLTACYRETRQAVPA 529
Query: 726 VTVVRAVCENWEKGEEGEKEEEGEEKTAGQLIDMDRIFAGNVLLDIYKATRQDPNVVSHL 785
V ++ A+ +G E TA D +AG L + D L
Sbjct: 530 VKLLSAIL-------------QGPESTATGTSRTD--WAGKFLTECLVEPPAD------L 568
Query: 786 EQLLNAFVEHAIPISAFSSDYIQNGLGSALTSDISKALGALTSDDL 831
L+ + + + IS ++D ++ G +L I L ++++ L
Sbjct: 569 SNLIPELLANKVHISRSAADTLRTRHGQSLGGSILDMLDQISAEKL 614
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Query: 508 VGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEY 567
+ L+ + + P+++ L + L + P + L L++AH++KED GA++ FE
Sbjct: 765 IAARLLTALAEQGGPVERALQLL--LERCWVTPSSTLLGPLVRAHLVKEDVPGALKAFEE 822
Query: 568 CVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLRIL 627
C Q+R TP KGEL ++ I + LQ++ D+ST +HGE N+L+DL FL+ +R
Sbjct: 823 CARQYRLTPLKGELSRQLINQGCSEELQKVVDISTEVHGEANTLFDLTAYFLECGHVRQA 882
Query: 628 Q 628
Q
Sbjct: 883 Q 883
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 9/184 (4%)
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A + E ++ P+ +NAL+ + + L M A ++P+ T+ +L
Sbjct: 121 ELARAVWEQLQSLGCPLDASHYNALLQVYLENEFPFCPSTFLATMEAASVQPNRVTFQRL 180
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQ 257
+ Y + GD+ + +K Q + + ++ N L+L + D +A +L +M
Sbjct: 181 IHRYCQQGDIAGASKILEHMKSQD---MAINERVFNSLVLGHCRAGDTENAWNVLEVMRN 237
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG---SSLVNGDYLDIIHALAVSGHGEY 314
A LEP+A T+ L+ G A+ GD + R ++ + L + LD++ LA +GH
Sbjct: 238 AQLEPTADTFHALLVGCAERGDQAGLERAFREADRVETFLPDELLLDVVRVLACAGHHGM 297
Query: 315 IDEV 318
ID V
Sbjct: 298 IDMV 301
>gi|194671407|ref|XP_001787859.1| PREDICTED: leucine-rich PPR motif-containing protein, mitochondrial
[Bos taurus]
Length = 1351
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 96/147 (65%), Gaps = 14/147 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NEH FSPTDFLAK+E ++PNRVTYQ +LI+ YC G+IE
Sbjct: 162 DVSHYNALLKVYLQNEHKFSPTDFLAKMEKGNVQPNRVTYQ------RLIAAYCNMGDIE 215
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA+ IL FM+ K P++E VF+AL+ GH+++ + E I + TY L+
Sbjct: 216 GASTILGFMKTKDLPVTEAVFSALVTGHARS---GALENIFIFEEYF----TKYTYLALL 268
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL 228
YA+ GD+D +K + ++ +S+L+L
Sbjct: 269 NAYAEKGDIDHVKQTLEKVE-KSDLYL 294
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 28/223 (12%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M + ++P+ TY +L+ Y GD++ +L + + + + +
Sbjct: 181 SPTDFLAKMEKGNVQPNRVTYQRLIAAYCNMGDIEGASTILGFMKTK--DLPVTEAVFSA 238
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+GH S + + I + + TY L+ YA+ GD+D ++
Sbjct: 239 LVTGHAR-----SGALENIFIFEEYF------------TKYTYLALLNAYAEKGDIDHVK 281
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+ L + S L++ D L II + + +G+ +Y+ EI+ KI Y D N I L+
Sbjct: 282 QTLEKVEKSDLYLMDRDLLQIILSFSKAGYPQYVPEILEKITYERRYIPDTMNLILLLVT 341
Query: 424 KGQIDAAYRIVNT--LARSANINGEQLPVGGFLVRHMVKTNQP 464
+ D A +I+ ++R +++N G F +RH V N P
Sbjct: 342 EKLEDTALQILLACPISRESSLND----FGSFFLRHCVTVNTP 380
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ ++ K+D A+E+ C +++ P ++L + I+ + +Q+ D + GE
Sbjct: 786 LVTLYLEKDDLPAALESTIDCYEKYKILPRIHDVLCKLIEKGETELIQKAMDFVSQEQGE 845
Query: 608 VNSLYDLMLSFL 619
+ LYDL +FL
Sbjct: 846 MTMLYDLFFAFL 857
>gi|321462789|gb|EFX73810.1| hypothetical protein DAPPUDRAFT_324958 [Daphnia pulex]
Length = 945
Score = 129 bits (324), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 95/151 (62%), Gaps = 6/151 (3%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
+VPLDI+H+N+LLR+YL+NEH+F+P FL+ + + I+P+RVTYQ +L+ Y Q
Sbjct: 105 FEVPLDINHFNSLLRIYLENEHSFNPLRFLSTMIEREIQPDRVTYQ------RLLIAYTQ 158
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G++EGA KIL ++ K I +NA++ GHS D A+ I++ MS GL P +T
Sbjct: 159 KGDLEGAKKILNILKHKELVIDYRTYNAIVTGHSMMGDWEGAKSIISSMSAKGLTPDTET 218
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
Y +L+ GYAK G +I + + + K + F
Sbjct: 219 YRELLKGYAKFGICFAISSSLENWKKMNVSF 249
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 478 HLINKGQIDAAYRIVNTLA----RSANINGEQLPVGGFLVRHM--------VKTNQPIDK 525
L+ G+ID A R++ L + NI +L V +R M V+T Q I
Sbjct: 677 RLLKVGRIDDAIRVLEKLKIDPRVTENIELTRL-VNASAIRLMDAAAENGNVETIQKIFD 735
Query: 526 VLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRF 585
L L RA L L+K HV+++D A++ F+ + R TPW +L
Sbjct: 736 CLEHSKALK----MSRAL-LGSLVKVHVVRDDLDSALDEFDRWTKERRTTPWNTQLAANL 790
Query: 586 IQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLR 625
I+ +D L R+ ++T++HGE NSL+DL L+FL + +R
Sbjct: 791 IEKDDTTRLDRLMRMNTAVHGEKNSLFDLSLAFLSCQRVR 830
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 9/178 (5%)
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
KI E + + P+ FN+L+ + + + L+ M + ++P TY +L+ Y
Sbjct: 97 KIWELLLNFEVPLDINHFNSLLRIYLENEHSFNPLRFLSTMIEREIQPDRVTYQRLLIAY 156
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG---ILTMMSQAGLE 261
+ GD++ K + LK + L ++ N ++ S M EG I++ MS GL
Sbjct: 157 TQKGDLEGAKKILNILKHKE---LVIDYRTYNAIVTGHSMMGDWEGAKSIISSMSAKGLT 213
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYID 316
P +TY +L+ GYAK G ++ L + S +GD L ++ AV GH E +D
Sbjct: 214 PDTETYRELLKGYAKFGICFAISSSLENWKKMNVSFSDGDLLAALYKAAVHGHSEAVD 271
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 21/228 (9%)
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
L+ M + ++P TY +L+ Y + GD++ +++L + DY + V+GH
Sbjct: 134 LSTMIEREIQPDRVTYQRLLIAYTQKGDLEGAKKILNILKHKELVIDYR--TYNAIVTGH 191
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL-- 369
D A + MS GL P +TY +L+ GYAK G +I L
Sbjct: 192 SMMGDWEGAKSIISS----------MSAKGLTPDTETYRELLKGYAKFGICFAISSSLEN 241
Query: 370 -AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQID 428
+ S +GD L ++ AV GH E +D ++++++ Y+ N I L+ + + +
Sbjct: 242 WKKMNVSFSDGDLLAALYKAAVHGHSEAVDILLNRMRKDRDYNRSCVNIILQLVTQRKEN 301
Query: 429 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGY--SADAAN 474
A++I+ ++ I+ + + R +V+T + + + +AAN
Sbjct: 302 EAFKILLSMKPKRTIDDKIVE----FCRKLVQTEKNSRAFFIALEAAN 345
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 111/516 (21%), Positives = 209/516 (40%), Gaps = 78/516 (15%)
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLD---IIHALAVSGH 393
M + ++P TY +L+ Y + GD++ +++L + DY I+ ++ G
Sbjct: 137 MIEREIQPDRVTYQRLLIAYTQKGDLEGAKKILNILKHKELVIDYRTYNAIVTGHSMMGD 196
Query: 394 GEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-- 451
E IIS + G + D + L + + I ++L N +++ V
Sbjct: 197 WEGAKSIISSMSAK-GLTPDTETYRELLKGYAKFGICFAISSSLE-----NWKKMNVSFS 250
Query: 452 -GFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYR--IVNTLARSANINGEQLPV 508
G L+ + K G + D L+N+ + D Y VN + + E
Sbjct: 251 DGDLLAALYKAAVHGHSEAVDI------LLNRMRKDRDYNRSCVNIILQLVTQRKEN--- 301
Query: 509 GGFLVRHMVKTNQPID-KVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEY 567
F + +K + ID K++ C +L + RAF +A L A++ + +E +
Sbjct: 302 EAFKILLSMKPKRTIDDKIVEFCRKLVQTEKNSRAFFIA-LEAANIFER-----IELVDP 355
Query: 568 CVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLRIL 627
+N+ R G F+ + A+ +Q G L D +
Sbjct: 356 LLNEIR----DGGSSANFLGSILASGMQ---------SGGEKKLIDTLRKM--------- 393
Query: 628 QVAEAEFGVGSNTETLRDYVLPVLSPPNQVSGEVFSQLRSVGVTIGSITSAYVVHMLRQH 687
A + N +T+ ++LP L+ +Q + +LRS ++ I+ A + L
Sbjct: 394 ----AAIRLYPNVQTINKHILPHLAGDSQT---LLQKLRSARLSFPVISVALLQKSLASL 446
Query: 688 NLKEAALLAKSFRAHYAKVVVR--PVLAVSYLRTQDLPSLVTVVRAVCENWEKGEEGEKE 745
+ EA + +F Y + +R +A +Y+++Q+ L ++ ++ + GEE E +
Sbjct: 447 DFNEAIRITSTF---YISMNLRLYEDIATAYVKSQNATGLARLMNSLLPD---GEEDETK 500
Query: 746 EEGEEKTAGQLIDMDRIFAGNVLLDIYKATRQDPNVVSHLEQLLNAFVEHAIPISAFSSD 805
E E + Q+I G+VL +I T + +E LL A + + IS +
Sbjct: 501 NEAME-LSSQII-------GSVLKEICDQT--PSGQLEVIEPLLEALKDQGLTISLSVAQ 550
Query: 806 YIQNGLGSA-LTSDISKALGALTSDDLMPQPLQYVP 840
++++ +TS L LTS L+P PL P
Sbjct: 551 FVRDKASEGKMTSAAVDLLAELTSGKLIPVPLNPTP 586
>gi|53135191|emb|CAG32404.1| hypothetical protein RCJMB04_24j16 [Gallus gallus]
Length = 218
Score = 127 bits (318), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 77/103 (74%), Gaps = 6/103 (5%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL D SHYNALL+VYL NEH FSPT+FLA++E ++PNRVTYQ +LI+ YC
Sbjct: 110 ELGAVYDTSHYNALLKVYLQNEHKFSPTEFLARMEEANVQPNRVTYQ------RLIAAYC 163
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASA 178
+G+IEGA+KIL FM+ K PI+E VF++L+ GH+++ D+ SA
Sbjct: 164 NEGDIEGASKILGFMKSKDLPITEAVFSSLVKGHARSGDIKSA 206
>gi|345483302|ref|XP_001606270.2| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like [Nasonia vitripennis]
Length = 1331
Score = 120 bits (300), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+L V LD+SHYN LL +YL+NE+ F P DFL ++ ++ ++PN+VT+Q + I ++C
Sbjct: 141 KLGVELDVSHYNVLLSIYLENEYDFCPLDFLEEMLNKNVKPNKVTFQ------RFIQQFC 194
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G + A +++E M++ PI+E V + I+GH N+M + IL M + P+ +
Sbjct: 195 NQGKVTEANQLVEHMKNYQIPINEEVLASFIWGHLMNNNMNAVHEILKDMELLEIVPTIR 254
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
Y+ LM YA GDMDSIK + K +
Sbjct: 255 MYSTLMYAYATKGDMDSIKKILADCKAK 282
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 110/513 (21%), Positives = 205/513 (39%), Gaps = 117/513 (22%)
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISK 403
P+ + Y+ LM YA GDMDSI+++LA + DI D+++ K
Sbjct: 251 PTIRMYSTLMYAYATKGDMDSIKKILADCKAK-------DIWVP----------DKVLLK 293
Query: 404 IQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQ 463
+ IYHL G ++ I++ ++
Sbjct: 294 V-------------IYHLSLNGFTESVDEILSMTSK------------------------ 316
Query: 464 PGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPI 523
G Y +A +Y L+ K Q A++I TL ++A + + G F + ++ PI
Sbjct: 317 -GTLYIKEANQMMYKLVEKKQESVAFKIFQTLPKNAR--NQAVTSGNFFIETLINFQTPI 373
Query: 524 DKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWK---GE 580
+K + C + +E ++ R+F L+ + K+ + D + TF WK G+
Sbjct: 374 EKSVEYCRIMAEEGINQRSF-LSAINKS--IANDMHDSSITF--------MKAWKDLGGQ 422
Query: 581 LLKRFIQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDAEVLRILQVAEAEFGVGSNT 640
+ + + A +GE + ++LQ EF + +
Sbjct: 423 VREHYFYPIFKA------------YGETGHW---------EGIEKVLQKMILEFDLFPSI 461
Query: 641 ETLRDYVLPVLSPPNQVSGEVFSQLRSVGVTIGSITSAYVVHMLRQHNLKEAALLAKSFR 700
TL+ ++LP + + +V + L + V +A +H+L ++ ++EA+ ++
Sbjct: 462 YTLKSHILPYMQSS---ADDVLASLVNAHVDYHIALNAITLHLLSENKIREASRFLATYN 518
Query: 701 AHYAKV-VVRPVLAVSYLRTQDLPSLVTVVRAVCENWEKGEEGEKEEEGEEKT------A 753
+ K+ +++ L ++ T+D PS V+++ + KG EK + T A
Sbjct: 519 SSCCKIGMIKYNLLQAFKNTEDAPSFVSILHLIY----KGALDEKNNNAQNTTIENKYLA 574
Query: 754 GQLIDMDRIFAGNVLLDIYKATRQDPNVVSHLEQLLNAFVEHAIPISAFSSDYIQNGLGS 813
Q ID A + + PN L V + IS + ++N L
Sbjct: 575 QQFIDSCITEAIDFI---------SPNDKYLLLMFFRTLVNKGLSISPEIATEVENKLKD 625
Query: 814 ALTSDISKALGALTSDDLMPQPLQYVPSMFIPR 846
LT +I KAL + S +L+P+P+ + IPR
Sbjct: 626 YLTKEIVKALNVMKSGELVPKPI--LRDFSIPR 656
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 181 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK----PQSELFLCFSFQLTN 236
L M ++P+ T+ + + + G + + +K P +E L SF +
Sbjct: 170 FLEEMLNKNVKPNKVTFQRFIQQFCNQGKVTEANQLVEHMKNYQIPINEEVLA-SFIWGH 228
Query: 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV- 295
L+ +++M + IL M + P+ + Y+ LM YA GDMDS++++LA + +
Sbjct: 229 LM---NNNMNAVHEILKDMELLEIVPTIRMYSTLMYAYATKGDMDSIKKILADCKAKDIW 285
Query: 296 --NGDYLDIIHALAVSGHGEYIDEV 318
+ L +I+ L+++G E +DE+
Sbjct: 286 VPDKVLLKVIYHLSLNGFTESVDEI 310
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 537 NLHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQR 596
N+H F + LI+ H+ + D A++ FE ++ P + EL+K FI+ D L+R
Sbjct: 823 NMHDSLF--SPLIQFHLDRNDPVTALQKFELLYRTWKKVPCRVELMKVFIKNSDNDSLER 880
Query: 597 ITDLSTSIHGEVNSLYDLMLSFLDAEVLR 625
+ + SI GE + + L +++L+ L+
Sbjct: 881 VKTICKSIMGETETNFYLAMAYLENNDLK 909
>gi|444705915|gb|ELW47293.1| Leucine-rich PPR motif-containing protein, mitochondrial [Tupaia
chinensis]
Length = 1172
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 102/211 (48%), Gaps = 40/211 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+SHYNALL+VYL NE+ FSPTDFLAK+E I+PNRVTYQ +LI+ YC G+IE
Sbjct: 115 DVSHYNALLKVYLQNEYKFSPTDFLAKMEEANIQPNRVTYQ------RLIAAYCNVGDIE 168
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
G A DM +AE IL +M +AG+EP TY L+
Sbjct: 169 G-----------------------------ARDMENAENILKVMKEAGIEPGPDTYLALL 199
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
YA+ GD+D +K L K + QLT L + A+ ++ M
Sbjct: 200 NAYAEKGDIDHVKQPAEKLTDYCKKLKEAQMHTSPLQLTLHCALQAKKTDLAKALMKAMK 259
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ G + L+ G+ K ++ + +L
Sbjct: 260 EEGFPVRTHYFWPLLVGHQKEKNVQGIIEVL 290
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 548 LIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGE 607
L+ ++ K+D + A++ C +++ P ++L + I+ + +Q+ D + GE
Sbjct: 609 LVTVYLEKDDLSTALQVTIDCYEKYKILPRIHDVLCKLIEKGETELIQKAMDFVSQEQGE 668
Query: 608 VNSLYDLMLSFLDA----EVLRILQVAEAE 633
+ LYDL +FL E +I++V E
Sbjct: 669 MTMLYDLFFAFLQTGNYKEAKKIIEVETLE 698
>gi|156407356|ref|XP_001641510.1| predicted protein [Nematostella vectensis]
gi|156228649|gb|EDO49447.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 87/135 (64%), Gaps = 6/135 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V LDI YNALL VYL N + F+P + L +++S G+EPN L + + +I + Q+G
Sbjct: 56 VNLDIMMYNALLSVYLQNGYKFNPLEVLERIQSSGLEPN------LTTMALVIQGFGQNG 109
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+I+G K+LEFM+ P++E ++ +LI + + DM SA+G+ +M G+EP ++YT
Sbjct: 110 DIQGVFKVLEFMKAADMPVTEPIYTSLILAYGKNRDMESAKGVFNLMRDNGMEPGIESYT 169
Query: 199 KLMCGYAKHGDMDSI 213
L+ YA++GD+ SI
Sbjct: 170 SLLTMYAENGDLQSI 184
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
++NAL+ + Q + +L + +GLEP+ T ++ G+ ++GD+ + + +
Sbjct: 62 MYNALLSVYLQNGYKFNPLEVLERIQSSGLEPNLTTMALVIQGFGQNGDIQGVFKVLEFM 121
Query: 221 KPQSELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
K + + + LIL + DM SA+G+ +M G+EP ++YT L+ YA++
Sbjct: 122 KAAD---MPVTEPIYTSLILAYGKNRDMESAKGVFNLMRDNGMEPGIESYTSLLTMYAEN 178
Query: 278 GDMDSV 283
GD+ S+
Sbjct: 179 GDLQSI 184
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
+L + +GLEP+ T ++ G+ ++GD+ V ++L ++ + + I+ +
Sbjct: 82 VLERIQSSGLEPNLTTMALVIQGFGQNGDIQGVFKVLEFMKAA--DMPVTEPIYTSLILA 139
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
+G+ D SA F +M G+EP ++YT L+ YA++GD+ SI
Sbjct: 140 YGKNRDMESAKGVF----------NLMRDNGMEPGIESYTSLLTMYAENGDLQSI 184
>gi|351706054|gb|EHB08973.1| Leucine-rich PPR motif-containing protein, mitochondrial
[Heterocephalus glaber]
Length = 570
Score = 115 bits (287), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 87/153 (56%), Gaps = 36/153 (23%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL D+SHYNALL+VYL N++ FSPTDFLAK+E I+PNRVTYQ +LI+ YC
Sbjct: 334 ELGTVYDVSHYNALLKVYLQNKYKFSPTDFLAKMEEANIQPNRVTYQ------RLIAAYC 387
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G+IEG A DM +AE ILT+M + G+EP
Sbjct: 388 NVGDIEG-----------------------------ARDMENAENILTVMRETGIEPGPD 418
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
TY L+ YA+ GD+D +K + ++ +S+L+L
Sbjct: 419 TYLALLNAYAEKGDIDHVKQTLEKVQ-KSDLYL 450
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 72/175 (41%), Gaps = 44/175 (25%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S L M +A ++P+ TY +L+ Y GD++ R D + + L
Sbjct: 359 SPTDFLAKMEEANIQPNRVTYQRLIAAYCNVGDIEGAR-------------DMENAENIL 405
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V M + G+EP TY L+ YA+ GD+D ++
Sbjct: 406 TV----------------------------MRETGIEPGPDTYLALLNAYAEKGDIDHVK 437
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHI 418
+ L + S L++ D L +I + + +G+ +Y+ E++ KI Y D A +
Sbjct: 438 QTLEKVQKSDLYLMDRDLLQLIFSFSKAGYPQYVSEVLEKITYERRYIPDLAKTL 492
>gi|340722651|ref|XP_003399717.1| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like [Bombus terrestris]
Length = 625
Score = 99.8 bits (247), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 82/138 (59%), Gaps = 8/138 (5%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC-Q 136
+ + ISHYN LL++Y+ NE+ FS T+ L ++ + I PN TY K+ +YC
Sbjct: 134 NFKMSISHYNQLLKLYIRNEYDFSTTELLMHMKCKEIYPNDTTY-------KICIRYCCM 186
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
GNI+ A +++ M+ FPISE VFN+LI G+SQ+ D+ + IL M Q L+ + +T
Sbjct: 187 KGNIDKALMLVKDMQKLHFPISESVFNSLILGYSQSGDIMNVNKILDYMKQQKLKLTTET 246
Query: 197 YTKLMCGYAKHGDMDSIK 214
Y L+ +AK ++ +K
Sbjct: 247 YAALIYTHAKLNNVAKVK 264
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 141/336 (41%), Gaps = 31/336 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N ++ V +F+ +E+ GI+PN VTY +I YC G +EGA
Sbjct: 194 FNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHG------YCSRGRVEGARM 247
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I + M+ + + + I G + + A G+L M + GL P+A TY L+ GY
Sbjct: 248 IFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYC 307
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
G+++ + + + ++ + + + M A+GI+ MS+ GL P +
Sbjct: 308 NKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSV 367
Query: 266 TYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV---- 318
TY L+ GY + G++ L + G Y +I+ L+ G + D++
Sbjct: 368 TYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKI 427
Query: 319 -------SAIVCFVNICFHWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDM 362
I+ I H G M M Q + P T+ LM G + G +
Sbjct: 428 VRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKV 487
Query: 363 DSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYID 398
++ R L+ + S + D+ I + +SG+ + D
Sbjct: 488 EAARELIEEMKSRGIKPDH--ISYNTLISGYSKRGD 521
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 105/254 (41%), Gaps = 31/254 (12%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK-----TK 216
FN +I + + A+ + +M G++P+ TY ++ GY G ++ + K
Sbjct: 194 FNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMK 253
Query: 217 IPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
+KP S + F + + A G+L M + GL P+A TY L+ GY
Sbjct: 254 CRGVKPDSYTYGSFISGMCK-----EGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCN 308
Query: 277 HGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
G+++ R + + G Y +IHAL + +DE I+
Sbjct: 309 KGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCK---MDEADGII----------- 354
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAV 390
MS+ GL P + TY L+ GY + G++ L + G Y +I+ L+
Sbjct: 355 -KEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSK 413
Query: 391 SGHGEYIDEIISKI 404
G + D++ KI
Sbjct: 414 RGRMKQADDLFEKI 427
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 118/279 (42%), Gaps = 30/279 (10%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+S YN L+ + + ++ +G+ P+ VTY LI+ YC+ GN++
Sbjct: 331 VSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILING------YCRCGNVKK 384
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + + M K + + +LIY S+ M A+ + + + G+ P + L+
Sbjct: 385 AFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALID 444
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAG 259
G+ +G+MD LK ++ + N L+ + +A ++ M G
Sbjct: 445 GHCANGNMDR---AFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRG 501
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYID 316
++P +Y L+ GY+K GDM R+ + S N L +I L + G++ +
Sbjct: 502 IKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAE 561
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCG 355
+ L M+S+ G+ P+ TY L+ G
Sbjct: 562 Q--------------LLKEMISK-GITPNDNTYLSLIEG 585
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP +++ +N L++ + + + +++S+GI+P+ ++Y LIS Y + G
Sbjct: 468 VPDEVT-FNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISG------YSKRG 520
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+++ A ++ + M F + +NALI G + + AE +L M G+ P+ TY
Sbjct: 521 DMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYL 580
Query: 199 KLMCG 203
L+ G
Sbjct: 581 SLIEG 585
>gi|356544457|ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 711
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 34/293 (11%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L++LE +G+ N + Y + L+ YC+ +E A + M+ K +E FN L
Sbjct: 362 LSELEKKGVSSNAIVY------NTLMDAYCKSNRVEEAEGLFIEMKTKGIKHTEATFNIL 415
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS------IKTKIPS 219
+Y +S+ E ++ M AGL+P+A++YT L+ Y K +M +K K
Sbjct: 416 MYAYSRKMQPEIVEKLMAEMQDAGLKPNAKSYTCLISAYGKQKNMSDMAADAFLKMKKDG 475
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
+KP S + + VS A M + G++PS +TYT L+ + + GD
Sbjct: 476 IKPTSHSYTALIHAYS-----VSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGD 530
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
++ ++ V G + + + HG Y + I F N+
Sbjct: 531 TQTLMKIWKLMRRYKVEGTRVTFNTLVDGFAKHGHYKEARDVISKFANV----------- 579
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHAL 388
GL P+ TY LM YA+ G + LL + + + D Y +I+A
Sbjct: 580 --GLHPTVMTYNMLMNAYARGGQHSKLPELLEEMAAHNLKPDSVTYSTMIYAF 630
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 57/282 (20%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI +C +G + A IL + K + V+N L+ + ++N + AEG+ M G
Sbjct: 345 LIKSFCVEGLMSEALIILSELEKKGVSSNAIVYNTLMDAYCKSNRVEEAEGLFIEMKTKG 404
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
++ + T+ LM Y++ K Q E+ E
Sbjct: 405 IKHTEATFNILMYAYSR--------------KMQPEI---------------------VE 429
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR----LLAQSGSSLVNGDYLDIIHA 305
++ M AGL+P+A++YT L+ Y K +M + + + G + Y +IHA
Sbjct: 430 KLMAEMQDAGLKPNAKSYTCLISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHA 489
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
+VSG E A F N M + G++PS +TYT L+ + + GD ++
Sbjct: 490 YSVSGWHE-----KAYAAFEN----------MQREGIKPSIETYTALLDAFRRAGDTQTL 534
Query: 366 RRLLAQNGSSLVNG---DYLDIIHALAVSGHGEYIDEIISKI 404
++ V G + ++ A GH + ++ISK
Sbjct: 535 MKIWKLMRRYKVEGTRVTFNTLVDGFAKHGHYKEARDVISKF 576
>gi|383850309|ref|XP_003700738.1| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like [Megachile rotundata]
Length = 579
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 9/152 (5%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+ L++ HYN LL+VY+DN + FSP D L +++ I PN TY I + YC
Sbjct: 126 NFKLNVVHYNTLLQVYIDNNYNFSPPDILMEMKDNEILPNFATYHMCIKH------YCIK 179
Query: 138 GNIEGATKILE--FMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
GN+ A +L F++ + + +FN L+ G+SQ ++ S + IL +M ++P+A
Sbjct: 180 GNVNEAMSLLTSGFVKIPWHYLIQ-IFNTLLVGYSQLGNIKSVDNILYIMENRNIKPTAD 238
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
TY +MC YAK D++ IK I + F
Sbjct: 239 TYAVVMCTYAKLNDINKIKEIIQDCHSRKMYF 270
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 30/234 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
F ++ +N L+ + N S IL M + P+ TY + Y G+++
Sbjct: 127 FKLNVVHYNTLLQVYIDNNYNFSPPDILMEMKDNEILPNFATYHMCIKHYCIKGNVNEAM 186
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSS---DMASAEGILTMMSQAGLEPSAQTYTKLM 271
+ + S ++ + Q+ N L++ S ++ S + IL +M ++P+A TY +M
Sbjct: 187 SLLTS--GFVKIPWHYLIQIFNTLLVGYSQLGNIKSVDNILYIMENRNIKPTADTYAVVM 244
Query: 272 CGYAKHGDMDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYID------------ 316
C YAK D++ ++ ++ S N L +I+ LA + H E +D
Sbjct: 245 CTYAKLNDINKIKEIIQDCHSRKMYFTNTHILRVIYTLAANNHLESVDAMYEYLKNTLNI 304
Query: 317 ---EVSAIVCFVNI----CFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
E+ I+ NI L M+SQ+ ++ T TKL+ YA ++D
Sbjct: 305 SNAEMQVIMDIFNIGQVNIVTTLFSHMLSQSYVK---YTNTKLLLRYAIDVNLD 355
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 18/194 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
S IL M + P+ TY + Y G+++ LL SG + YL I
Sbjct: 149 SPPDILMEMKDNEILPNFATYHMCIKHYCIKGNVNEAMSLLT-SGFVKIPWHYLIQIFNT 207
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
+ G+ + + I NI + +M ++P+A TY +MC YAK D++ I+
Sbjct: 208 LLVGYSQ----LGNIKSVDNILY------IMENRNIKPTADTYAVVMCTYAKLNDINKIK 257
Query: 367 RLLAQNGSS---LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
++ S N L +I+ LA + H E +D + ++ + S I + N
Sbjct: 258 EIIQDCHSRKMYFTNTHILRVIYTLAANNHLESVDAMYEYLKNTLNISNAEMQVIMDIFN 317
Query: 424 KGQIDAAYRIVNTL 437
GQ++ IV TL
Sbjct: 318 IGQVN----IVTTL 327
>gi|356541064|ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 703
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 125/293 (42%), Gaps = 34/293 (11%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L++LE +G+ N + Y + L+ YC+ +E A + M+ K +E FN L
Sbjct: 354 LSELEKKGVSSNTIVY------NTLMDAYCKSNRVEEAEGLFVEMKTKGIKPTEATFNIL 407
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS------IKTKIPS 219
+Y +S+ E ++ M + GL+P+A++YT ++ Y K +M +K K
Sbjct: 408 MYAYSRKMQPEIVEKLMAEMQETGLKPNAKSYTCIISAYGKQKNMSDMAADAFLKMKKDG 467
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
+KP S + + VS A M + G++PS +TYT L+ + + GD
Sbjct: 468 IKPTSHSYTALIHAYS-----VSGWHEKAYAAFENMQREGIKPSIETYTALLDAFRRAGD 522
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
++ ++ V G + + + HG Y + I F N+
Sbjct: 523 TQTLMKIWKLMRREKVEGTRVTFNTLVDGFAKHGYYKEARDVISKFANV----------- 571
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHAL 388
GL P+ TY LM YA+ G + LL + + + D Y +I+A
Sbjct: 572 --GLHPTVMTYNMLMNAYARGGRHSKLPELLEEMAAHNLKPDSVTYSTMIYAF 622
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 57/282 (20%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI +C +G + A IL + K + V+N L+ + ++N + AEG+ M G
Sbjct: 337 LIKSFCVEGLMSEALIILSELEKKGVSSNTIVYNTLMDAYCKSNRVEEAEGLFVEMKTKG 396
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
++P+ T+ LM Y++ K Q E+ E
Sbjct: 397 IKPTEATFNILMYAYSR--------------KMQPEI---------------------VE 421
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR----LLAQSGSSLVNGDYLDIIHA 305
++ M + GL+P+A++YT ++ Y K +M + + + G + Y +IHA
Sbjct: 422 KLMAEMQETGLKPNAKSYTCIISAYGKQKNMSDMAADAFLKMKKDGIKPTSHSYTALIHA 481
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
+VSG E A F N M + G++PS +TYT L+ + + GD ++
Sbjct: 482 YSVSGWHE-----KAYAAFEN----------MQREGIKPSIETYTALLDAFRRAGDTQTL 526
Query: 366 RRLLAQNGSSLVNG---DYLDIIHALAVSGHGEYIDEIISKI 404
++ V G + ++ A G+ + ++ISK
Sbjct: 527 MKIWKLMRREKVEGTRVTFNTLVDGFAKHGYYKEARDVISKF 568
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 174/399 (43%), Gaps = 52/399 (13%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D D+ YNAL+ + E +FL ++++ G++PN VTY S I +C++
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTY------STFIDAFCKE 174
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G ++ A K MR +E + +LI + +A ++A A ++ + QAG++ + TY
Sbjct: 175 GMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTY 234
Query: 198 TKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLL--ILVSSDMASAEG 250
T L+ G + G M + ++ P E + T L+ + + +M A+
Sbjct: 235 TALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETY-------TALVHGFIKAKEMEYAKD 287
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALA 307
IL M + ++P Y ++ G ++ + L+ + S +N + Y ++ A
Sbjct: 288 ILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYF 347
Query: 308 VSGHG--------EYIDEVSAIVCFVNICFHWLEGPM--MSQAGLEPSAQTYTKLMCGYA 357
SG E +D V + N CF + M G+ P YT L+ G
Sbjct: 348 KSGQATEALTLLEEMLDLVDGLC--KNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNM 405
Query: 358 KHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISKIQPGVGY 410
KHG++ ++R + + G L Y +I L+ SG + +DE+I K G
Sbjct: 406 KHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGK-----GV 460
Query: 411 SADAANHIYHLINK----GQIDAAYRIVNTLARSANING 445
D ++ LI K G++D A + N +A+ I G
Sbjct: 461 LPDEVVYMC-LIKKYYALGKVDEALELQNEMAKRGMITG 498
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 113/288 (39%), Gaps = 38/288 (13%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F + + GI+ + TY + +I C++G++E A + M++ F +N+
Sbjct: 43 FFKDMGAAGIKRSVFTY------NIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNS 96
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPS 219
LI GH + + I M A +P TY L+ + K M + K
Sbjct: 97 LIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANG 156
Query: 220 LKPQSELFLCF--SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
LKP + F +F +L A M + L P+ TYT L+ K
Sbjct: 157 LKPNVVTYSTFIDAFCKEGML-------QEAIKFFVDMRRVALTPNEFTYTSLIDANCKA 209
Query: 278 GDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
G++ +L + Q+G L Y ++ L G + +EV
Sbjct: 210 GNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRA------------- 256
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL 382
M AG+ P+ +TYT L+ G+ K +M+ + +L + + D L
Sbjct: 257 --MLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLL 302
>gi|350424234|ref|XP_003493730.1| PREDICTED: leucine-rich PPR motif-containing protein,
mitochondrial-like [Bombus impatiens]
Length = 585
Score = 96.3 bits (238), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
Query: 84 SHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGA 143
+HYN LL +Y NE+ FS + L ++ + I PN +TY+ I C GNI+ A
Sbjct: 100 AHYNELLNLYTRNEYDFSIMELLMHMKCKQIYPNDITYKICIEYC------CMKGNIDMA 153
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+E +R FPISE VFN+LI G+SQ+ D+ +A ++ M Q L+ +++TY L+
Sbjct: 154 LMFVENIRKLQFPISESVFNSLILGYSQSGDIENANRMINYMRQQKLKLTSETYAALIYT 213
Query: 204 YAKHGDMDSIK 214
YAK ++ IK
Sbjct: 214 YAKLNNVAKIK 224
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 95.9 bits (237), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 142/346 (41%), Gaps = 31/346 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
L + + +N ++ V DF+ +E+ G++PN VTY +I YC
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHG------YC 282
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +EGA +L+ M+++ + +LI G + + A GIL M + GL P+A
Sbjct: 283 SRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAV 342
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
TY L+ GY GD+ + ++ L ++ L + + M A+G++ M
Sbjct: 343 TYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM 402
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHG 312
+G+ P + TY L+ GY + G+ L + G Y +I+ L+
Sbjct: 403 GDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRM 462
Query: 313 EYIDEV-----------SAIVCFVNICFHWLEGPM---------MSQAGLEPSAQTYTKL 352
+ D++ I+ I H G + M + + P TY L
Sbjct: 463 KAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTL 522
Query: 353 MCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYID 398
M G + G ++ R LL + + D+ I + +SG+ + D
Sbjct: 523 MQGRCREGKVEEARELLKEMKRRGIRPDH--ISYNTLISGYSKRGD 566
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 12/197 (6%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +L+ V + D K+ +G P+ + + LI +C +GN++ A
Sbjct: 449 YTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDG------HCANGNLDRAFA 502
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M + E +N L+ G + + A +L M + G+ P +Y L+ GY+
Sbjct: 503 LLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYS 562
Query: 206 KHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
K GD++ +I+ ++ S+ L L ++ + L D+ AE +L M G+ P
Sbjct: 563 KRGDINDAFTIRDEMLSIGFNPTL-LTYNALIQGLCKNQQGDL--AEELLKEMVSKGITP 619
Query: 263 SAQTYTKLMCGYAKHGD 279
TY L+ G K D
Sbjct: 620 DDSTYFSLIEGIGKVDD 636
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 115/282 (40%), Gaps = 24/282 (8%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+S YN L+ + + GI P+ +TY LI+ YC+ GN +
Sbjct: 376 VSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILING------YCRCGNAKK 429
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + + M K + + +LIY S+ N M +A+ + + + G P + L+
Sbjct: 430 AFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALID 489
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
G+ +G++D + + ++ + ++ + A +L M + G+ P
Sbjct: 490 GHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRP 549
Query: 263 SAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
+Y L+ GY+K GD++ ++R + G + Y +I L + G+ +E
Sbjct: 550 DHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEE-- 607
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
L M+S+ G+ P TY L+ G K D
Sbjct: 608 ------------LLKEMVSK-GITPDDSTYFSLIEGIGKVDD 636
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 112/269 (41%), Gaps = 37/269 (13%)
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
L RD+ S VF+ LI + A MM + G+ P +T+ ++ + K
Sbjct: 154 LAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLK 213
Query: 207 HGDMDSI---KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
+++ ++ LK +S + ++F + ++ + A+ + M G++P+
Sbjct: 214 LNQTETVWVLYAEMFRLKIKSTV---YTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPN 270
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSA 320
TY ++ GY G ++ R +L + V D Y +I + G ++E S
Sbjct: 271 VVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGK---LEEASG 327
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM--------DSIRRLLAQN 372
I+ M + GL P+A TY L+ GY GD+ + +RR +
Sbjct: 328 IL------------EKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPT 375
Query: 373 GSSLVNGDYLDIIHALAVSGHGEYIDEII 401
S+ Y +IHAL + G + D +I
Sbjct: 376 VST-----YNLLIHALFLEGKMDEADGMI 399
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 136/301 (45%), Gaps = 34/301 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P + +N L+R + S + +++S+G+ + ++S + +IS C+ G
Sbjct: 112 LPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVR------RTVVSFNTMISGMCRAG 165
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+++GA + M + + ALI G + + A G+ M G++P+A +T
Sbjct: 166 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 225
Query: 199 KLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
L+ + K GD +++ + + ++P + + L + D+ SA GI+
Sbjct: 226 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCR-----ARDLKSASGIVV 280
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
M AGL P TYT L+ GY K ++D +++ + G L Y +I L+ +G
Sbjct: 281 EMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAG 340
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+ V G MM +AGLEP TYT ++ + + GD+ + RLL
Sbjct: 341 RSADAERVL--------------GEMM-EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 385
Query: 371 Q 371
+
Sbjct: 386 E 386
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 138/327 (42%), Gaps = 24/327 (7%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
G+L + E V D+ Y AL++ K+ +G++PN V +
Sbjct: 165 GDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVF 224
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
+ LI +C+ G+ E ++ MR++ +NA++ G +A D+ SA GI
Sbjct: 225 ------TILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278
Query: 182 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV 241
+ M AGL P TYT L+ GY K ++D ++ + ++ +
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 338
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGD 298
+ A AE +L M +AGLEP TYT ++ + + GD+ + RLL + G
Sbjct: 339 AGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVT 398
Query: 299 YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
Y I++ G + D + + +NI G+ P TY L+ G+ K
Sbjct: 399 YNVIMNGFCKLGQMKNADML--LNAMINI-------------GVSPDDITYNILLDGHCK 443
Query: 359 HGDMDSIRRLLAQNGSSLVNGDYLDII 385
HG + I L + G+ G Y I+
Sbjct: 444 HGKVTDIEELKSAKGTVPDLGVYTSIV 470
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 93.6 bits (231), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 136/301 (45%), Gaps = 34/301 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P + +N L+R + S + +++S+G+ + ++S + +IS C+ G
Sbjct: 236 LPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVR------RTVVSFNTMISGMCRAG 289
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+++GA + M + + ALI G + + A G+ M G++P+A +T
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 349
Query: 199 KLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
L+ + K GD +++ + + ++P + + L + D+ SA GI+
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCR-----ARDLKSASGIVV 404
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
M AGL P TYT L+ GY K ++D +++ + G L Y +I L+ +G
Sbjct: 405 EMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAG 464
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+ V G MM +AGLEP TYT ++ + + GD+ + RLL
Sbjct: 465 RSADAERVL--------------GEMM-EAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLK 509
Query: 371 Q 371
+
Sbjct: 510 E 510
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 141/333 (42%), Gaps = 36/333 (10%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
G+L + E V D+ Y AL++ K+ +G++PN V +
Sbjct: 289 GDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVF 348
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
+ LI +C+ G+ E ++ MR++ +NA++ G +A D+ SA GI
Sbjct: 349 ------TILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402
Query: 182 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMD-SIKTKIPSLKPQSELFLCFSFQLTNLLIL 240
+ M AGL P TYT L+ GY K ++D +++ K Q+ + L
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIK------QNMVAEGVGLDEVTYTAL 456
Query: 241 VS-----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGS 292
+S A AE +L M +AGLEP TYT ++ + + GD+ + RLL + G
Sbjct: 457 ISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGR 516
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
Y I++ G + D + + +NI G+ P TY L
Sbjct: 517 KPGVVTYNVIMNGFCKLGQMKNADML--LNAMINI-------------GVSPDDITYNIL 561
Query: 353 MCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDII 385
+ G+ KHG + I L + G+ G Y I+
Sbjct: 562 LDGHCKHGKVTDIEELKSAKGTVPDLGVYTSIV 594
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 178/437 (40%), Gaps = 81/437 (18%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI------------ 125
D D+ YNAL+ + E +FL ++++ G++PN VTY I
Sbjct: 320 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 379
Query: 126 -----------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ + LI C+ GN+ A K++E + ++ + AL+ G
Sbjct: 380 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 439
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK-----TKIPSLKPQ 223
+ M AE + M AG+ P+ +TYT L+ G+ K +M+ K K +KP
Sbjct: 440 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 499
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
L+ + L N S + A+ ++ + ++G+ +A YT LM Y K G
Sbjct: 500 LLLYGTILWGLCN-----ESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEA 554
Query: 284 RRLLAQS---GSSLVNGDYLDIIHALAVSG-------HGEYIDEV---------SAIV-- 322
LL + G Y +I L SG H + E+ +A+V
Sbjct: 555 LTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDG 614
Query: 323 -CFVNICFHWLEGPM--MSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSL 376
C N CF + M G+ P YT L+ G KHG++ ++R + + G L
Sbjct: 615 LC-KNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMEL 673
Query: 377 VNGDYLDIIHALAVSGHGE----YIDEIISKIQPGVGYSADAANHIYHLINK----GQID 428
Y +I L+ SG + +DE+I K G D ++ LI K G++D
Sbjct: 674 DLHAYTALIWGLSHSGQVQKARNLLDEMIGK-----GVLPDEVVYMC-LIKKYYALGKVD 727
Query: 429 AAYRIVNTLARSANING 445
A + N +A+ I G
Sbjct: 728 EALELQNEMAKRGMITG 744
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 113/293 (38%), Gaps = 48/293 (16%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F + + GI+ + TY + +I C++G++E A + M++ F +N+
Sbjct: 242 FFKDMGAAGIKRSVFTY------NIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNS 295
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPS 219
LI GH + + I M A +P TY L+ + K M + K
Sbjct: 296 LIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANG 355
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM-------MSQAGLEPSAQTYTKLMC 272
LKP + F D EG+L M + L P+ TYT L+
Sbjct: 356 LKPNVVTYSTF------------IDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLID 403
Query: 273 GYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICF 329
K G++ +L + Q+G L Y ++ L G + +EV
Sbjct: 404 ANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFR--------- 454
Query: 330 HWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL 382
M AG+ P+ +TYT L+ G+ K +M+ + +L + + D L
Sbjct: 455 ------AMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLL 501
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 135/336 (40%), Gaps = 31/336 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N ++ V +F+ +E+ G++PN VTY +I +C G + A
Sbjct: 219 FNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHG------HCLRGKFQRARV 272
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I + M+DK +N+ I G + + A G++ M + GL P+A TY L+ GY
Sbjct: 273 IFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYC 332
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
GD+D + + + ++ L + + M A+ ++ M + G+ P A
Sbjct: 333 NKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAV 392
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
T+ L+ GY + GD LL + + + + V G + E A+ +
Sbjct: 393 THNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKI 452
Query: 326 N--------ICF------HWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDM 362
I F H G + M + P TY LM GY + G +
Sbjct: 453 QQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKV 512
Query: 363 DSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYID 398
+ R+LL + + D+ I + +SG+ + D
Sbjct: 513 EEARQLLDEMKRRGIKPDH--ISYNTLISGYSKRGD 546
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 137/335 (40%), Gaps = 39/335 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN+ + + + K+ G+ PN VTY LI YC G+++
Sbjct: 285 DCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDG------YCNKGDLD 338
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M K S +N I+ M A+ ++ M + G+ P A T+ L+
Sbjct: 339 KAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILI 398
Query: 202 CGYAKHGD-------MDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
GY + GD +D + K ++P + + L + M A+ + +
Sbjct: 399 NGYCRCGDAKRAFGLLDEMVGK--GIQPTLVTYTSLIYVLGK-----RNRMKEADALFSK 451
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE- 313
+ Q GL P + L+ G+ +G++D +LL + + V D +I + + G+
Sbjct: 452 IQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPD--EITYNTLMQGYCRE 509
Query: 314 -YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLL 369
++E ++ M + G++P +Y L+ GY+K GDM +R +
Sbjct: 510 GKVEEARQLL------------DEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEM 557
Query: 370 AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI 404
G Y +I L + GE+ +E++ ++
Sbjct: 558 MTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEM 592
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 91/224 (40%), Gaps = 44/224 (19%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +L+ V +K++ +G+ P+ + + LI +C +GNI+ A +
Sbjct: 429 YTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDG------HCANGNIDRAFQ 482
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M + E +N L+ G+ + + A +L M + G++P +Y L+ GY+
Sbjct: 483 LLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYS 542
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K GDM + + + E M G +P+
Sbjct: 543 KRGDMKD------AFRVRDE-----------------------------MMTTGFDPTIL 567
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
TY L+ G K+ + + LL + S + D YL II A+
Sbjct: 568 TYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611
>gi|47218221|emb|CAF97085.1| unnamed protein product [Tetraodon nigroviridis]
Length = 811
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS---LVNGDYLDIIHALAVSG 392
+M AG++P TY L+ YA+ GDMDS ++ L SS L++ D++ +I LA +G
Sbjct: 10 VMKGAGIDPGPDTYISLLNVYAEKGDMDSFKKTLEAAESSDCTLMDRDFMQVIFTLAKAG 69
Query: 393 HGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLA--RSANINGEQLPV 450
H +++ E+I +++ GY DA N LI +G D A+ I+ T +S N+N E V
Sbjct: 70 HQQHLPEVIDRLRHERGYVPDAMNLCLSLITQGLEDTAFYILKTFPTLQSDNLNSEASNV 129
Query: 451 GGFLVRHMVKTNQP 464
G F +RH V + P
Sbjct: 130 GNFFLRHCVTMDTP 143
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS---LVNGDYLD 301
M SA ILT+M AG++P TY L+ YA+ GDMDS ++ L + SS L++ D++
Sbjct: 1 MESARNILTVMKGAGIDPGPDTYISLLNVYAEKGDMDSFKKTLEAAESSDCTLMDRDFMQ 60
Query: 302 IIHALAVSGHGEYIDEV 318
+I LA +GH +++ EV
Sbjct: 61 VIFTLAKAGHQQHLPEV 77
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 540 PRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAEDAACLQRITD 599
P A + L+ +++ D++GA+E C N++R P +++ ++ D LQ+ D
Sbjct: 623 PSANLCSPLVTSYLDSRDFSGALEAAMECQNRYRHLPRIHDVIIGLVEKGDTELLQKAMD 682
Query: 600 LSTSIHGEVNSLYDLMLSFLDA----EVLRILQVAE 631
+ GE+ LYDL +FL E +I+++++
Sbjct: 683 FVSQTRGEMTMLYDLFFAFLQTGRYREARKIVEISK 718
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS 219
M SA ILT+M AG++P TY L+ YA+ GDMDS K + +
Sbjct: 1 MESARNILTVMKGAGIDPGPDTYISLLNVYAEKGDMDSFKKTLEA 45
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 138/336 (41%), Gaps = 31/336 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N ++ V +F+ +E G +PN V+Y +I Y GNIEGA +
Sbjct: 252 FNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHG------YSSRGNIEGARR 305
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
IL+ MR K + +LI G + + A G+ M + GL P+A TY L+ GY
Sbjct: 306 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC 365
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
GD++ + + + + ++ L + + M A+ ++ M + G+ P A
Sbjct: 366 NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 425
Query: 266 TYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDE----- 317
TY L+ GY++ G+ L + G + Y +I+ L+ + D+
Sbjct: 426 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 485
Query: 318 ----VSAIVCFVNICF--HWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDM 362
VS V N H G + M + + P T+ LM G + G +
Sbjct: 486 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 545
Query: 363 DSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYID 398
+ R LL + + D+ I + +SG+G D
Sbjct: 546 EEARMLLDEMKRRGIKPDH--ISYNTLISGYGRRGD 579
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 70 FSVHTGELDVPLDISH--YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
F +H L ++ +H Y +L+ V D K+ QG+ P+ + + ++
Sbjct: 444 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDG 503
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+C +GN+E A +L+ M K+ P E FN L+ G + + A +L M +
Sbjct: 504 ------HCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKR 557
Query: 188 AGLEPSAQTYTKLMCGYAKHGDM-DSIKTKI--------PSLKPQSELFLCFSFQLTNLL 238
G++P +Y L+ GY + GD+ D+ + + P+L + L C L
Sbjct: 558 RGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDL 617
Query: 239 ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
AE +L M G+ P TY L+ G G++D++
Sbjct: 618 ---------AEELLKEMVNKGISPDDSTYLSLIEGM---GNVDTL 650
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 111/268 (41%), Gaps = 27/268 (10%)
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
L RD+ S VF+ L+ + A MM + G+ P +T ++ + K
Sbjct: 167 LTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLK 226
Query: 207 HGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
M+ + ++ L+ S ++ +F + ++ + A + M G +P+
Sbjct: 227 LNRMEMAWVLYAEMFRLRISSTVY---TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPN 283
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSA 320
+Y ++ GY+ G+++ RR+L + D Y +I + G ++E S
Sbjct: 284 VVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR---LEEASG 340
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLV 377
+ M + GL P+A TY L+ GY GD++ S R + + G
Sbjct: 341 LF------------DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPS 388
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISKIQ 405
Y ++HAL + G D++I +++
Sbjct: 389 VSTYNLLVHALFMEGRMGEADDMIKEMR 416
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 113/286 (39%), Gaps = 27/286 (9%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+S YN L+ D + ++ +GI P+ +TY LI+ Y + GN +
Sbjct: 389 VSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING------YSRCGNAKK 442
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + M K + + +LIY S+ N M A+ + + G+ P + ++
Sbjct: 443 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVD 502
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
G+ +G+++ + + +S +F + A +L M + G++P
Sbjct: 503 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKP 562
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYIDEVS 319
+Y L+ GY + GD+ R+ + S N L +I L + G+ +E+
Sbjct: 563 DHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 622
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
M G+ P TY L+ G G++D++
Sbjct: 623 K---------------EMVNKGISPDDSTYLSLIEGM---GNVDTL 650
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 138/336 (41%), Gaps = 31/336 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N ++ V +F+ +E G +PN V+Y +I Y GNIEGA +
Sbjct: 230 FNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHG------YSSRGNIEGARR 283
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
IL+ MR K + +LI G + + A G+ M + GL P+A TY L+ GY
Sbjct: 284 ILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC 343
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
GD++ + + + + ++ L + + M A+ ++ M + G+ P A
Sbjct: 344 NKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 403
Query: 266 TYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDE----- 317
TY L+ GY++ G+ L + G + Y +I+ L+ + D+
Sbjct: 404 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 463
Query: 318 ----VSAIVCFVNICF--HWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDM 362
VS V N H G + M + + P T+ LM G + G +
Sbjct: 464 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 523
Query: 363 DSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYID 398
+ R LL + + D+ I + +SG+G D
Sbjct: 524 EEARMLLDEMKRRGIKPDH--ISYNTLISGYGRRGD 557
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 29/225 (12%)
Query: 70 FSVHTGELDVPLDISH--YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
F +H L ++ +H Y +L+ V D K+ QG+ P+ + + ++
Sbjct: 422 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDG 481
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+C +GN+E A +L+ M K+ P E FN L+ G + + A +L M +
Sbjct: 482 ------HCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKR 535
Query: 188 AGLEPSAQTYTKLMCGYAKHGDM-DSIKTKI--------PSLKPQSELFLCFSFQLTNLL 238
G++P +Y L+ GY + GD+ D+ + + P+L + L C L
Sbjct: 536 RGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDL 595
Query: 239 ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
AE +L M G+ P TY L+ G G++D++
Sbjct: 596 ---------AEELLKEMVNKGISPDDSTYLSLIEGM---GNVDTL 628
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 111/268 (41%), Gaps = 27/268 (10%)
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
L RD+ S VF+ L+ + A MM + G+ P +T ++ + K
Sbjct: 145 LTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLK 204
Query: 207 HGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
M+ + ++ L+ S ++ +F + ++ + A + M G +P+
Sbjct: 205 LNRMEMAWVLYAEMFRLRISSTVY---TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPN 261
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSA 320
+Y ++ GY+ G+++ RR+L + D Y +I + G ++E S
Sbjct: 262 VVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGR---LEEASG 318
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLV 377
+ M + GL P+A TY L+ GY GD++ S R + + G
Sbjct: 319 LF------------DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPS 366
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISKIQ 405
Y ++HAL + G D++I +++
Sbjct: 367 VSTYNLLVHALFMEGRMGEADDMIKEMR 394
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 113/286 (39%), Gaps = 27/286 (9%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+S YN L+ D + ++ +GI P+ +TY LI+ Y + GN +
Sbjct: 367 VSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING------YSRCGNAKK 420
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + M K + + +LIY S+ N M A+ + + G+ P + ++
Sbjct: 421 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVD 480
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
G+ +G+++ + + +S +F + A +L M + G++P
Sbjct: 481 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKP 540
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYIDEVS 319
+Y L+ GY + GD+ R+ + S N L +I L + G+ +E+
Sbjct: 541 DHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 600
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
M G+ P TY L+ G G++D++
Sbjct: 601 K---------------EMVNKGISPDDSTYLSLIEGM---GNVDTL 628
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 134/318 (42%), Gaps = 31/318 (9%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+F+ +E G +PN V+Y +I Y GNIEGA +IL+ MR K +
Sbjct: 194 EFIGFMEGLGFKPNVVSYNTIIHG------YSSRGNIEGARRILDAMRVKGIEPDSYTYG 247
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
+LI G + + A G+ M + GL P+A TY L+ GY GD++ + + +
Sbjct: 248 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK 307
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ ++ L + + M A+ ++ M + G+ P A TY L+ GY++ G+
Sbjct: 308 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRA 367
Query: 284 RRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDE---------VSAIVCFVN--ICF 329
L + G + Y +I+ L+ + D+ VS V N I
Sbjct: 368 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDG 427
Query: 330 HWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD 380
H G + M + + P T+ LM G + G ++ R LL + + D
Sbjct: 428 HCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPD 487
Query: 381 YLDIIHALAVSGHGEYID 398
+ I + +SG+G D
Sbjct: 488 H--ISYNTLISGYGRRGD 503
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 17/219 (7%)
Query: 70 FSVHTGELDVPLDISH--YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
F +H L ++ +H Y +L+ V D K+ QG+ P+ + + +I
Sbjct: 368 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDG 427
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+C +GN+E A +L+ M K+ P E FN L+ G + + A +L M
Sbjct: 428 ------HCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKX 481
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
G++P +Y L+ GY + GD+ ++ ++ S+ L L ++ + L D
Sbjct: 482 RGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTL-LTYNALIKCLCKNQEGD 540
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ AE +L M G+ P TY L+ G G++D++
Sbjct: 541 L--AEELLKEMVNKGISPDDSTYLSLIEGM---GNVDTL 574
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 124/315 (39%), Gaps = 62/315 (19%)
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+G ++ A + + FM F + +N +I+G+S ++ A IL M G+EP + T
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y L+ G K G ++ A G+ M
Sbjct: 246 YGSLISGMCKEGRLE-----------------------------------EASGLFDKMV 270
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGH-G 312
+ GL P+A TY L+ GY GD++ S R + + G Y ++HAL + G G
Sbjct: 271 EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 330
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---L 369
E D + M + G+ P A TY L+ GY++ G+ L +
Sbjct: 331 EADDMIKE----------------MRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEM 374
Query: 370 AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI-QPGVGYSADAANHIY--HLINKGQ 426
G + Y +I+ L+ + D++ KI GV N + H N G
Sbjct: 375 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCAN-GN 433
Query: 427 IDAAYRIVNTLARSA 441
++ A+ ++ + R +
Sbjct: 434 VERAFMLLKEMDRKS 448
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 240 LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD- 298
L+ + A + M G +P+ +Y ++ GY+ G+++ RR+L + D
Sbjct: 184 LLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDS 243
Query: 299 --YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY 356
Y +I + G ++E S + M + GL P+A TY L+ GY
Sbjct: 244 YTYGSLISGMCKEGR---LEEASGLF------------DKMVEIGLVPNAVTYNTLIDGY 288
Query: 357 AKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
GD++ S R + + G Y ++HAL + G D++I +++
Sbjct: 289 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 340
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 90.1 bits (222), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 118/282 (41%), Gaps = 24/282 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y++++ Y + ++ + GIEPN TY LI+ +C+ G +E
Sbjct: 247 DVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALING------FCKIGQME 300
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ M+ + I++ VFN +I G+ + N + A I +M + G+E TY L
Sbjct: 301 AAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLA 360
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
CG + MD K + + + S+ + DM A + M+ G E
Sbjct: 361 CGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAE 420
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
PS TY +M GY K G + R + + D Y ++H V+G
Sbjct: 421 PSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGK------- 473
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
V++ E M Q G +P+ YT L+ G AK G
Sbjct: 474 ------VDVALRLFE--EMKQRGSKPNLVAYTALISGLAKEG 507
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 14/246 (5%)
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
+S S ++ YC+ G + A ++L+ M ++ +N+L+ +++ D +L +
Sbjct: 144 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 203
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
M G+EP+ TYT L+ G + D+ ++ +K ++ + + + +
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 263
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
+ A + G+EP+ TY L+ G+ K G M++ L+ V + I+
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN--QIVF 321
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM-MSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+ G+ C N+ LE M M + G+E TY L CG + MD
Sbjct: 322 NTMIDGY-----------CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMD 370
Query: 364 SIRRLL 369
+ LL
Sbjct: 371 EAKNLL 376
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/466 (21%), Positives = 199/466 (42%), Gaps = 45/466 (9%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ S G+ PNR TY + LI + ++GNIE A +I + M + ++ +NA+I G
Sbjct: 337 MPSSGLNPNRFTY------TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGG 390
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
++A +MA A + M AGLEP TY L+ GY K DM + +K +
Sbjct: 391 IAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPS 450
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
F++ + + SSD+ A +L M + G++P+ Y L+ Y + + LL
Sbjct: 451 PFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510
Query: 289 QSGSSLVNGDYLDII-HALAVSG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ NG D+ + + G + ++E ++ M + G++P+
Sbjct: 511 ---IMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLV------------DMGEKGIKPN 555
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
A TY + Y+K G++ R SS + + ++I+ + + GH +
Sbjct: 556 AHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN--NVIYTILIKGHCD---------- 603
Query: 406 PGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG 465
VG + +A + ++ KG I R + + S + NG+ G ++ + P
Sbjct: 604 --VGNTVEALSTFKCMLEKGLI-PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPD 660
Query: 466 VGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDK 525
V I +G I+ A ++ + + + IN + V L+ + K + + K
Sbjct: 661 VFLYNSL---ISGFCKEGDIEKASQLYDEMLHNG-IN-PNIVVYNTLINGLCKLGE-VTK 714
Query: 526 VLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQ 571
+ + +++L P + +I + + T A + F+ +++
Sbjct: 715 ARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISK 760
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D+ Y +++ + L+++E + +PN TY I CQ G
Sbjct: 239 VP-DVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGG------LCQTG 290
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A ++ + M +K + L+ G + A+ I M +GL P+ TYT
Sbjct: 291 AVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELF---LCFSFQLTNLL---ILVSSDMASAEGIL 252
L+ G+ K G+++ +L+ + E+ L + N + I + +MA A +
Sbjct: 351 ALIDGFIKEGNIEE------ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLF 404
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
M AGLEP TY L+ GY K DM LLA+
Sbjct: 405 NEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAE 441
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 140/344 (40%), Gaps = 55/344 (15%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L+ YL + + LA+++++ + P+ TY S LIS C +++
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTY------SVLISGLCHSSDLQ 468
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L+ M + ++ LI + Q + A +L +M G+ P Y L+
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528
Query: 202 CGYAKHGDMDSIKTKI-----PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
G + ++ K + +KP + + F NL S ++ AE M
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAF----INLYS-KSGEIQVAERYFKDML 583
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG------DYLDIIHALAVSG 310
+G+ P+ YT L+ G H D+ + L+ L G Y IIH+L S
Sbjct: 584 SSGIVPNNVIYTILIKG---HCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSL--SK 638
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL-- 368
+G+ + + + F+ + G+ P Y L+ G+ K GD++ +L
Sbjct: 639 NGKTKEAMGVFLKFL-------------KTGVVPDVFLYNSLISGFCKEGDIEKASQLYD 685
Query: 369 -LAQNG--------SSLVNGDYLDIIHALAVSGHGEYIDEIISK 403
+ NG ++L+NG + V+ E DEI K
Sbjct: 686 EMLHNGINPNIVVYNTLING----LCKLGEVTKARELFDEIEEK 725
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 113/303 (37%), Gaps = 29/303 (9%)
Query: 72 VHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLI 131
V GE + + Y A + +Y + + + S GI PN V Y + LI
Sbjct: 545 VDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIY------TILI 598
Query: 132 SKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
+C GN A + M +K ++A+I+ S+ A G+ + G+
Sbjct: 599 KGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV 658
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMA 246
P Y L+ G+ K GD++ + P ++ L L ++
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKL-----GEVT 713
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
A + + + L P TY+ ++ GY K G++ +L + S ++ D I+ +
Sbjct: 714 KARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPD--GYIYCI 771
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
+ G G+ + A+ F +Q S + L+ + KHG + R
Sbjct: 772 LIDGCGKEGNLEKALSLFHE-----------AQQKSVGSLSAFNSLIDSFCKHGKVIEAR 820
Query: 367 RLL 369
L
Sbjct: 821 ELF 823
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 99/255 (38%), Gaps = 52/255 (20%)
Query: 157 ISEGVFNALIYGHS------QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210
ISEG F LI ++ +AN M + M +A + P TYT ++ + K GD+
Sbjct: 199 ISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDV 258
Query: 211 DSIKTKIPSLKPQSE--LF--------LCFSFQLTNLLILVSSDMASAEG---------- 250
K + ++ + + LF LC + + L + M G
Sbjct: 259 IKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLV 318
Query: 251 --------------ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN 296
I M +GL P+ TYT L+ G+ K G+++ R+ +
Sbjct: 319 DGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRI---KDEMITR 375
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY 356
G L+++ A+ G E++ + N M AGLEP TY L+ GY
Sbjct: 376 GLKLNVVTYNAMIGGIAKAGEMAKAMSLFN---------EMLMAGLEPDTWTYNLLIDGY 426
Query: 357 AKHGDMDSIRRLLAQ 371
K DM LLA+
Sbjct: 427 LKSHDMAKACELLAE 441
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 14/212 (6%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D+ YN+L+ + + ++ GI PN V Y LI+ C+ G
Sbjct: 658 VP-DVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLING------LCKLG 710
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A ++ + + +K ++ +I G+ ++ ++ A + M G+ P Y
Sbjct: 711 EVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYC 770
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMM 255
L+ G K G+++ K SL +++ S N LI + A + M
Sbjct: 771 ILIDGCGKEGNLE----KALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDM 826
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
L P+ TYT L+ Y K M+ +L
Sbjct: 827 VDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF 858
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +LL Y + F +E++GI + + Y + S YC++G A K
Sbjct: 873 YTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAY------GVMASAYCKEGKSLEALK 926
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L + + + VF+ALI+ + +++ +L+ M + L S++T L+ G+
Sbjct: 927 LLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFY 986
Query: 206 KHGDMD 211
K G+ D
Sbjct: 987 KSGNED 992
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 101/258 (39%), Gaps = 29/258 (11%)
Query: 34 ALGAFLVLL-------VLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHY 86
A+G FL L V L+ L S +C E + + ++ +H G + +I Y
Sbjct: 645 AMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE--MLHNG---INPNIVVY 699
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N L+ + ++E + + P+ VTY S +I YC+ GN+ A K+
Sbjct: 700 NTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTY------STIIDGYCKSGNLTEAFKL 753
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
+ M K ++ LI G + ++ A + Q + S + L+ + K
Sbjct: 754 FDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSV-GSLSAFNSLIDSFCK 812
Query: 207 HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV-----SSDMASAEGILTMMSQAGLE 261
HG + + + + + + IL+ + M AE + M +
Sbjct: 813 HGKVIEARELFDDMVDKK-----LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNII 867
Query: 262 PSAQTYTKLMCGYAKHGD 279
P+ TYT L+ Y + G+
Sbjct: 868 PNTLTYTSLLLSYNQIGN 885
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 118/282 (41%), Gaps = 24/282 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y++++ Y + ++ + GIEPN TY LI+ +C+ G +E
Sbjct: 171 DVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTY------GALINGFCKIGQME 224
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ M+ + I++ VFN +I G+ + N + A I +M + G+E TY L
Sbjct: 225 AAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLA 284
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
CG + MD K + + + S+ + DM A + M+ G E
Sbjct: 285 CGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAE 344
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
PS TY +M GY K G + R + + D Y ++H V+G
Sbjct: 345 PSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGK------- 397
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
V++ E M Q G +P+ YT L+ G AK G
Sbjct: 398 ------VDVALRLFE--EMKQRGSKPNLVAYTALISGLAKEG 431
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 14/246 (5%)
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
+S S ++ YC+ G + A ++L+ M ++ +N+L+ +++ D +L +
Sbjct: 68 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 127
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
M G+EP+ TYT L+ G + D+ ++ +K ++ + + + +
Sbjct: 128 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 187
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
+ A + G+EP+ TY L+ G+ K G M++ L+ V + I+
Sbjct: 188 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN--QIVF 245
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM-MSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+ G+ C N+ LE M M + G+E TY L CG + MD
Sbjct: 246 NTMIDGY-----------CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMD 294
Query: 364 SIRRLL 369
+ LL
Sbjct: 295 EAKNLL 300
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 109/495 (22%), Positives = 187/495 (37%), Gaps = 93/495 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNAL+ ++ G+ PN VTY S LI +C+ G ++ A
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY------SILIDMFCRRGKLDTALS 423
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
L M D +S +N+LI GH + D+++AEG + M LEP+ TYT LM GY
Sbjct: 424 FLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPS 263
G ++ + + ++F T LL + + + A + M++ ++P+
Sbjct: 484 SKGKINKALRLYHEMTGKGIAPSIYTF--TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE----YID 316
TY ++ GY + GDM L + + D Y +IH L ++G ++D
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 317 EVSAIVCFVN-ICFHWL------EGPM--------------------------------- 336
+ C +N IC+ L EG +
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661
Query: 337 -----------MSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYL 382
M GL+P YT ++ +K GD I L+ G Y
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721
Query: 383 DIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH-----LINKGQID--AAYRIVN 435
+I+ L +G + + SK+QP + N + + ++ KG++D A + N
Sbjct: 722 AVINGLCKAGFVNEAEVLCSKMQP----VSSVPNQVTYGCFLDILTKGEVDMQKAVELHN 777
Query: 436 TLARS--ANINGEQLPVGGFLVRHMVK------TNQPGVGYSADAANH---IYHLINKGQ 484
+ + AN + + GF + ++ T G G S D + I L +
Sbjct: 778 AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 485 IDAAYRIVNTLARSA 499
+ A + N++
Sbjct: 838 VKKAIELWNSMTEKG 852
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 136/363 (37%), Gaps = 52/363 (14%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI--------------- 125
++I YN L+ + + L + ++P+ VTY L+
Sbjct: 260 VNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEM 319
Query: 126 --------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+ S L+ + G IE A +++ + D + V+NALI +
Sbjct: 320 MDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK 379
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
AE + M + GL P+ TY+ L+ + + G +D T + L + L S
Sbjct: 380 GRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLD---TALSFLGEMVDTGLKLS 436
Query: 232 FQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
N LI D+++AEG + M LEP+ TYT LM GY G ++ RL
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 289 Q-SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
+ +G + Y + G D V M++ ++P+
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF-------------NEMAEWNVKPNRV 543
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI 404
TY ++ GY + GDM L + + D Y +IH L ++G + +
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Query: 405 QPG 407
G
Sbjct: 604 HKG 606
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 115/298 (38%), Gaps = 40/298 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y ++R + + + +A +E+ G + N V Y LI C+ +
Sbjct: 226 DVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDG------LCKKQKVW 279
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A I + + K + L+YG + + ++ M PS + L+
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLV 339
Query: 202 CGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMM 255
G K G ++ ++ ++ LF + N LI AE + M
Sbjct: 340 EGLRKRGKIEEALNLVKRVVDFGVSPNLF------VYNALIDSLCKGRKFHEAELLFDRM 393
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHG 312
+ GL P+ TY+ L+ + + G +D+ L + +G L Y +I+ GH
Sbjct: 394 GKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN-----GHC 448
Query: 313 EYIDEVSAIVCFVNICFHWLEGPM--MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
++ D +A EG M M LEP+ TYT LM GY G ++ RL
Sbjct: 449 KFGDISAA------------EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Score = 47.0 bits (110), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFS--------------PTDFLAKLESQGIEPNRVT 120
GE+D+ + +NA+L+ L N T++ ++ + ++ G+ P+ +T
Sbjct: 765 GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCIT 824
Query: 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEG 180
Y + +I++ C+ +++ A ++ M +K +N LI+G A +M A
Sbjct: 825 Y------TTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 181 ILTMMSQAGLEPSAQT 196
+ M + GL P+ +T
Sbjct: 879 LRNEMLRQGLIPNNKT 894
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 177/449 (39%), Gaps = 57/449 (12%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V +++ N ++ N+ + FL+ +E +G+ P+ VTY + LI+ YC+ G
Sbjct: 354 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY------NTLINAYCRQG 407
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A ++++ M K +NA+I G + A+G+L M + G+ P TY
Sbjct: 408 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 467
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ ++ +M + + Q + SF L+ + + A M A
Sbjct: 468 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 527
Query: 259 GLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
GL P YT L+ G+ ++G M VR + + G L Y I++ L
Sbjct: 528 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEA 587
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
DE+ M++ G+ P T+T L+ GY K G+M+ L
Sbjct: 588 DELFT---------------EMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQR 632
Query: 376 LVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLI------NKGQ 426
+ D Y +I E ++E+ + + Y NHI + I N G
Sbjct: 633 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY----PNHISYGILINGYCNMGC 688
Query: 427 IDAAYRI---------------VNTLARSANINGEQLPVGGFLVRHMVKTNQP-GVGYSA 470
+ A+R+ NT+ + G + FL ++K P G+ Y+
Sbjct: 689 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 748
Query: 471 DAANHIYHLINKGQIDAAYRIVNTLARSA 499
I I + +D A+ +VN + S
Sbjct: 749 ----LINGFIKEENMDRAFALVNKMENSG 773
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 6/205 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ + + + S+ I PN ++Y LI+ YC G +
Sbjct: 637 DVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISY------GILINGYCNMGCVS 690
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + M +K F + N ++ G+ +A + A+ L+ M G+ P TY L+
Sbjct: 691 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 750
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K +MD + ++ L ++ + M AE I+ M + G+
Sbjct: 751 NGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVN 810
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRL 286
P TYT L+ G+ ++ R+
Sbjct: 811 PDRSTYTSLINGHVTQNNLKEAFRV 835
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 89.7 bits (221), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 118/282 (41%), Gaps = 24/282 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y++++ Y + ++ + GIEPN TY LI+ +C+ G +E
Sbjct: 247 DVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALING------FCKIGQME 300
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ M+ + I++ VFN +I G+ + N + A I +M + G+E TY L
Sbjct: 301 AAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLA 360
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
CG + MD K + + + S+ + DM A + M+ G E
Sbjct: 361 CGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAE 420
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
PS TY +M GY K G + R + + D Y ++H V+G
Sbjct: 421 PSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGK------- 473
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
V++ E M Q G +P+ YT L+ G AK G
Sbjct: 474 ------VDVALRLFE--EMKQRGSKPNLVAYTALISGLAKEG 507
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 14/246 (5%)
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
+S S ++ YC+ G + A ++L+ M ++ +N+L+ +++ D +L +
Sbjct: 144 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 203
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
M G+EP+ TYT L+ G + D+ ++ +K ++ + + + +
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 263
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
+ A + G+EP+ TY L+ G+ K G M++ L+ V + I+
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGIN--QIVF 321
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM-MSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+ G+ C N+ LE M M + G+E TY L CG + MD
Sbjct: 322 NTMIDGY-----------CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMD 370
Query: 364 SIRRLL 369
+ LL
Sbjct: 371 EAKNLL 376
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 178/449 (39%), Gaps = 57/449 (12%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V +++ N ++ N+ + FL+ +E +G+ P+ VTY + LI+ YC+ G
Sbjct: 250 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY------NTLINAYCRQG 303
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A ++++ M K +NA+I G + A+G+L M + G+ P TY
Sbjct: 304 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 363
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ ++ +M + + Q + SF L+ + + A M A
Sbjct: 364 ILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNA 423
Query: 259 GLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
GL P YT L+ G+ ++G M VR + + G L Y I++ L
Sbjct: 424 GLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEA 483
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
DE+ M++ G+ P T+T L+ GY+K G+M+ L
Sbjct: 484 DELFT---------------EMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQR 528
Query: 376 LVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLI------NKGQ 426
+ D Y +I E ++E+ + + Y NHI + I N G
Sbjct: 529 NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY----PNHISYGILINGYCNMGC 584
Query: 427 IDAAYRI---------------VNTLARSANINGEQLPVGGFLVRHMVKTNQP-GVGYSA 470
+ A+R+ NT+ + G + FL ++K P G+ Y+
Sbjct: 585 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 644
Query: 471 DAANHIYHLINKGQIDAAYRIVNTLARSA 499
I I + +D A+ +VN + S
Sbjct: 645 ----LINGFIKEENMDRAFALVNKMENSG 669
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 6/205 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ + + + S+ I PN ++Y LI+ YC G +
Sbjct: 533 DVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISY------GILINGYCNMGCVS 586
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + M +K F + N ++ G+ +A + A+ L+ M G+ P TY L+
Sbjct: 587 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 646
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K +MD + ++ L ++ + M AE I+ M + G+
Sbjct: 647 NGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVN 706
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRL 286
P TYT L+ G+ ++ R+
Sbjct: 707 PDRSTYTSLINGHVTQNNLKEAFRV 731
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 182/452 (40%), Gaps = 63/452 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V +++ N ++ N+ + FL+ +E +G+ P+ VTY + LI+ YC+ G
Sbjct: 93 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY------NTLINAYCRQG 146
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A ++++ M K +NA+I G + A+G+L M + G+ P TY
Sbjct: 147 LLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYN 206
Query: 199 KLMCGYAKHGDM---DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
L+ ++ +M + I ++PS +L SF L+ + + A M
Sbjct: 207 ILLVECCRNDNMMDAERIFDEMPSQGVVPDL---VSFSALIGLLSKNGCLDQALKYFRDM 263
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
AGL P YT L+ G+ ++G M VR + + G L Y I++ L
Sbjct: 264 KNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKML 323
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
DE+ M++ G+ P T+T L+ GY+K G+M+ L
Sbjct: 324 SEADELFT---------------EMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 368
Query: 373 GSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLI------N 423
+ D Y +I E ++E+ + + Y NHI + I N
Sbjct: 369 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY----PNHISYGILINGYCN 424
Query: 424 KGQIDAAYRI---------------VNTLARSANINGEQLPVGGFLVRHMVKTNQP-GVG 467
G + A+R+ NT+ + G + FL ++K P G+
Sbjct: 425 MGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGIT 484
Query: 468 YSADAANHIYHLINKGQIDAAYRIVNTLARSA 499
Y+ I I + +D A+ +VN + S
Sbjct: 485 YNT----LINGFIKEENMDRAFALVNKMENSG 512
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 6/205 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ + + + S+ I PN ++Y LI+ YC G +
Sbjct: 376 DVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISY------GILINGYCNMGCVS 429
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + M +K F + N ++ G+ +A + A+ L+ M G+ P TY L+
Sbjct: 430 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 489
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K +MD + ++ L ++ + M AE I+ M + G+
Sbjct: 490 NGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVN 549
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRL 286
P TYT L+ G+ ++ R+
Sbjct: 550 PDRSTYTSLINGHVTQNNLKEAFRV 574
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 143/361 (39%), Gaps = 44/361 (12%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
++++ I +N ++ + DF+ +E G++PN VTY +I+ YC
Sbjct: 210 KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVING------YC 263
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G E A+KI + M+DK +N+ I + + A G+L + ++GL P+A
Sbjct: 264 LRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAV 323
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
TY L+ G GD+D + + + F++ L + + + AE ++ M
Sbjct: 324 TYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM 383
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
+ G+EP TY + GY + G+ L + + + V G +
Sbjct: 384 REKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRM 443
Query: 316 DEVSA-------------IVCF------------VNICFHWLEGPMMSQAGLEPSAQTYT 350
E I+ F ++ F L+ M A + P T+
Sbjct: 444 SEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKE--MDNAKVVPDEVTFN 501
Query: 351 KLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHG---------EYIDEII 401
LM GY + ++ ++LL + + D+ I + +SG+ E DE++
Sbjct: 502 TLMQGYCRERKVEEAKKLLDEMKERGIKPDH--ISYNTLISGYSKRGDMKDALEVFDEML 559
Query: 402 S 402
S
Sbjct: 560 S 560
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 123/309 (39%), Gaps = 56/309 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + D + ++ +G+EP+ VTY I+ YC+ GN + A
Sbjct: 360 YNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQING------YCRCGNAKKALS 413
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M +K + + +LI + N M+ AE + G+ P + L+ G+
Sbjct: 414 LFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHC 473
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+G++D +FQL L M A + P
Sbjct: 474 VNGNIDR------------------AFQL-----------------LKEMDNAKVVPDEV 498
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
T+ LM GY + ++ ++LL + + D+ I + +SG+ + D A+ F
Sbjct: 499 TFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDH--ISYNTLISGYSKRGDMKDALEVFD 556
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YL 382
M G +P+ TY L+ GY+K G+ D LL + S + D YL
Sbjct: 557 E----------MLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYL 606
Query: 383 DIIHALAVS 391
+I A+ +
Sbjct: 607 YVIEAMKTN 615
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 7/145 (4%)
Query: 67 EDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS 126
E+ F E +P DI +NAL+ + N + L ++++ + P+ VT+ L+
Sbjct: 447 EEKFKKSIKEGMLP-DIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQ 505
Query: 127 NSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMS 186
YC++ +E A K+L+ M+++ +N LI G+S+ DM A + M
Sbjct: 506 G------YCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEML 559
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMD 211
G +P+ TY L+ GY+K G+ D
Sbjct: 560 SLGFDPTLLTYNALIQGYSKIGEAD 584
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 115/302 (38%), Gaps = 56/302 (18%)
Query: 98 HTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRD-KTFP 156
HT +PT +L + NR+ + + L+S YCQ + A + L M++ + P
Sbjct: 124 HTTTPTVIFNEL---SLARNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIP 180
Query: 157 ISEG----------------------------------VFNALIYGHSQANDMASAEGIL 182
+E FN +I + A+ +
Sbjct: 181 KTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFI 240
Query: 183 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
M G++P+ TY ++ GY G ++ ++K ++ C+++ +
Sbjct: 241 GHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKE 300
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDY 299
+ A G+L + ++GL P+A TY L+ G GD+D + R + G Y
Sbjct: 301 RRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTY 360
Query: 300 LDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
+IHAL + I+E ++ M + G+EP TY + GY +
Sbjct: 361 NLLIHALFLEKR---IEEAEDMI------------KEMREKGVEPDVVTYNIQINGYCRC 405
Query: 360 GD 361
G+
Sbjct: 406 GN 407
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP +++ +N L++ Y L +++ +GI+P+ ++Y LIS Y + G
Sbjct: 494 VPDEVT-FNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISG------YSKRG 546
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+++ A ++ + M F + +NALI G+S+ + AE +L M G+ P TY
Sbjct: 547 DMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 67/162 (41%), Gaps = 15/162 (9%)
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
A+ + M G++P+ TY ++ GY G ++ ++ + D +
Sbjct: 235 KAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFI 294
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD--- 363
+ I+E S ++C + ++GL P+A TY L+ G GD+D
Sbjct: 295 SRLCKERRIEEASGVLC------------KLLESGLVPNAVTYNALIDGCCNKGDLDKAF 342
Query: 364 SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
+ R + G Y +IHAL + E +++I +++
Sbjct: 343 AYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMR 384
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 110/269 (40%), Gaps = 59/269 (21%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
+++ QGI P+ + Y + L+ +C+ G+I A+K M + + A+
Sbjct: 762 FSEMIGQGILPDTIVY------TTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 815
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I G Q DM A + M GLEP T+T+LM GY K G +
Sbjct: 816 ISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKD------------- 862
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
+F++ N +I QAG P+ TYT L+ G K GD+DS
Sbjct: 863 -----AFRVHNHMI-----------------QAGCSPNVVTYTTLIDGLCKEGDLDSANE 900
Query: 286 LLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
LL + + + Y I++ L SG+ I+E +V AGL
Sbjct: 901 LLHEMWKIGLQPNIFTYNSIVNGLCKSGN---IEEAVKLV------------GEFEAAGL 945
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT LM Y K G+MD + +L +
Sbjct: 946 NADTVTYTTLMDAYCKSGEMDKAQEILTE 974
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 148/337 (43%), Gaps = 31/337 (9%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E+ V +++ YN ++ L +E +G P+ ++Y S +I+ YC
Sbjct: 662 EVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISY------STVINGYC 715
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G ++ K++E M+ K + + ++I + +A AE + M G+ P
Sbjct: 716 RFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI 775
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMASAEGILT 253
YT L+ G+ K GD+ + + + + L ++ ++ + DM A +
Sbjct: 776 VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI--GDMVEAGKLFH 833
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSG 310
M GLEP T+T+LM GY K G + R+ + Q+G S Y +I L G
Sbjct: 834 EMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 893
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+ +E+ H M + GL+P+ TY ++ G K G+++ +L+
Sbjct: 894 DLDSANEL----------LH-----EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 938
Query: 371 QNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI 404
+ ++ +N D Y ++ A SG + EI++++
Sbjct: 939 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEM 975
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 96/230 (41%), Gaps = 18/230 (7%)
Query: 67 EDPFSVHTGELDVPL--DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL 124
+D F VH + ++ Y L+ S + L ++ G++PN TY +
Sbjct: 861 KDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI 920
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
++ C+ GNIE A K++ + L+ + ++ +M A+ ILT
Sbjct: 921 VNG------LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTE 974
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI-----PSLKPQSELFLCFSFQLTNLLI 239
M GL+P+ T+ LM G+ HG ++ + + + P + F C Q
Sbjct: 975 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYC---- 1030
Query: 240 LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ +++ +A I M G+EP +TY L+ G+ +M L +
Sbjct: 1031 -IRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQE 1079
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
++GI PN T+ + L+ +YC N++ AT I + M + + L+ GH
Sbjct: 1012 AKGIAPNATTF------NCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHC 1065
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 207
A +M A + M G S TY+ L+ G+ K
Sbjct: 1066 NARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKR 1102
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 16/231 (6%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V D+ YNAL+ + + D + ++ G++P++VTY LI C++G
Sbjct: 250 VKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGC------CKEG 303
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A ++ + M D+ + + + ALI G S+A AE IL M +AGL+P TYT
Sbjct: 304 ELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYT 363
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKP-----QSELFLCFSFQLTNLLILVSSDMASAEGILT 253
++ + K+GD +KT LK ++ + ++ + L M +A+ +L
Sbjct: 364 MVIDAFCKNGD---VKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSL--GQMKNADMLLN 418
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
M G+ P+ TY L+ G+ KHG + L + G G Y +I+
Sbjct: 419 AMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKSAKGMVSDFGVYTSLIN 469
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 135/301 (44%), Gaps = 30/301 (9%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK 129
F +H + VP + +N L+R + + S + ++ +G++P VT+ L+S
Sbjct: 101 FYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSG-- 158
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
C+ ++ A + M + A I G + + A + M + G
Sbjct: 159 ----MCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 214
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
L P+ T L+ + K GD+ + ++ ++ + +++L + L N V DM
Sbjct: 215 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNA--LVNGFCRV-RDMK 271
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDII 303
+A I+ M + GL+P TYT L+ G K G++D+ +++ ++ G +L + Y +I
Sbjct: 272 AANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALI 331
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
L+ +G + I+C M +AGL+P TYT ++ + K+GD+
Sbjct: 332 SGLSKAGRSV---DAERILC------------EMMEAGLQPDNTTYTMVIDAFCKNGDVK 376
Query: 364 S 364
+
Sbjct: 377 T 377
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 126/308 (40%), Gaps = 24/308 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y A ++ + ++ +G+ PN V + LI +C++G++
Sbjct: 183 DVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVL------TTLIDAHCKEGDVT 236
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
++ M + +NAL+ G + DM +A I+ M + GL+P TYT L+
Sbjct: 237 AGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLI 296
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K G++D+ + + ++ + + AE IL M +AGL+
Sbjct: 297 DGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQ 356
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG---DYLDIIHALAVSGHGEYIDEV 318
P TYT ++ + K+GD+ + + L + + N Y +++ G + D +
Sbjct: 357 PDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADML 416
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
+ + +C P+ TY L+ G+ KHG + L + G
Sbjct: 417 LNAMLNIGVC---------------PNDITYNILLDGHCKHGKVRDTEELKSAKGMVSDF 461
Query: 379 GDYLDIIH 386
G Y +I+
Sbjct: 462 GVYTSLIN 469
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 184/435 (42%), Gaps = 63/435 (14%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D+ + + N+L+R YL + + + GI N TY L+S C++
Sbjct: 394 DISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLS------WLCKE 446
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G + A I E M K S +N +I GH Q DM SA G+ M + GL+P+ TY
Sbjct: 447 GKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITY 506
Query: 198 TKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAE 249
+ LM GY K GD + + + ++ P F C N++I + + ++
Sbjct: 507 SVLMDGYFKKGDTEYAFGLYDRMRGENIAPSD--FTC------NIIINGLCKAGRTSESQ 558
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHAL 306
L + Q G P+ TY ++ G+ K G ++S V + + G S Y ++I+
Sbjct: 559 DRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGF 618
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
S + + +V M G+E Y L+ G+ + GDM +
Sbjct: 619 CKSNNMDLALKVM---------------DEMKNKGIELDVTVYCALIDGFCRKGDMVNAS 663
Query: 367 RLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIY-HLINKG 425
+LL++ ++ + ++++ +SG K+Q + +AA H++ +IN+G
Sbjct: 664 QLLSELQEVGLSPN--KVVYSSMISG--------FRKLQ-----NMEAALHLHKRMINEG 708
Query: 426 QIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG-VGYSADAANHIYHLINKGQ 484
I +I TL G+ L + K P + YS I+ L NKGQ
Sbjct: 709 -IPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSV----LIHGLCNKGQ 763
Query: 485 IDAAYRIVNTLARSA 499
++ A +I+ + R
Sbjct: 764 LENAQKILEDMDRKC 778
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P D+ Y L+ L ++ A++ ++GI P+ +TY S LI C G
Sbjct: 709 IPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITY------SVLIHGLCNKG 762
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A KILE M K + ++N LI GH + ++ A + M GL P TY
Sbjct: 763 QLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYD 822
Query: 199 KLMCGYAKHGDMDS 212
L+ G K G++ S
Sbjct: 823 ILVNGKVKDGNLFS 836
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 115/307 (37%), Gaps = 67/307 (21%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D + + ++R + + + +++G+E + Y S +I C+ +
Sbjct: 223 DCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAY------SIVIEAVCKKPDSV 276
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L MRDK + E +F +I + M A + M G + T LM
Sbjct: 277 AALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLM 336
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K GD+DS ELF M++ G+
Sbjct: 337 KGYCKQGDLDS----------ALELF-------------------------DKMNENGIC 361
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI-------IHALAVSGHGEY 314
P+ TY ++ K+G+MD + Q + ++ ++ + A + +
Sbjct: 362 PNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKL 421
Query: 315 IDEVSAIVCFV------NICFHWL--EGPM---------MSQAGLEPSAQTYTKLMCGYA 357
DE A+ C + N WL EG M M + G+ PS +Y ++ G+
Sbjct: 422 FDE--AVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHC 479
Query: 358 KHGDMDS 364
+ GDMDS
Sbjct: 480 QQGDMDS 486
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 170/410 (41%), Gaps = 46/410 (11%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD+ + L+ + + + L ++ + G+ PN +TY + +I YC+ G +
Sbjct: 425 LDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY------TSIIDGYCKSGKV 478
Query: 141 EGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A ++L+ M RD P + +N+L+YG + + A +LT M + G+ P+ TYT
Sbjct: 479 DIALEVLKMMERDGCQP-NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTT 537
Query: 200 LMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
L+ G D D+ + LKP + + L AE +
Sbjct: 538 LLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCK--------AGRAEEAYSF 589
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGH 311
+ + G+ + YT L+ G++K G+ D L+ + G + + Y ++HAL
Sbjct: 590 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649
Query: 312 GE----YIDEVS--AIVCFVNICFHWLEGPM---------------MSQAGLEPSAQTYT 350
+D++S I C + + L M M+ +G +PSA TYT
Sbjct: 650 LNEALPILDQMSLRGIKCTI-FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYT 708
Query: 351 KLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGY 410
+ Y K G ++ L+ + V D + + GH YID S ++ VG
Sbjct: 709 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGA 768
Query: 411 SADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVK 460
S + Y L+ K + V ++ S N +L + L+ MVK
Sbjct: 769 SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVK 818
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 155/382 (40%), Gaps = 44/382 (11%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ----GIEPNRVTYQQLISNS 128
TG + L YN LR + F T+++ ++ SQ G+ P+ VTY +I +
Sbjct: 138 RTGSARLALSPKCYNFALR----SLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKS- 192
Query: 129 KLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
YC++G++ A + + + NAL+ G+ + ++ A + MM
Sbjct: 193 -----YCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLM 247
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMA 246
G + + +YT L+ G + + +K S F+F ++ L S +
Sbjct: 248 GCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGL--CKSGRVG 305
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDII 303
A + M Q G+ PS TY ++ GY+K G M+ ++ L+ ++G + Y +I
Sbjct: 306 DARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI 365
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+ L E + ++ V + G P+ T+T L+ GY D
Sbjct: 366 YGLCDQKTEEAEELLNNAV----------------KEGFTPTVVTFTNLINGYCMAEKFD 409
Query: 364 SIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH--- 417
R+ + SS D + +I++L + E++++I G + +
Sbjct: 410 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISAN-GLVPNVITYTSI 468
Query: 418 IYHLINKGQIDAAYRIVNTLAR 439
I G++D A ++ + R
Sbjct: 469 IDGYCKSGKVDIALEVLKMMER 490
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 117/319 (36%), Gaps = 54/319 (16%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ D + T + L +G P VT+ + LI+ YC + A +
Sbjct: 361 YNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTF------TNLINGYCMAEKFDDALR 413
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M + VF LI + + + A+ +L +S GL P+ TYT ++ GY
Sbjct: 414 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 473
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G +D A +L MM + G +P+A
Sbjct: 474 KSGKVD-----------------------------------IALEVLKMMERDGCQPNAW 498
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
TY LM G K + LL + + + I + + G + D +A F
Sbjct: 499 TYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV--ITYTTLLQGQCDEHDFDNAFRLF- 555
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDII 385
MM Q GL+P Y L K G + + + G +L Y +I
Sbjct: 556 ---------EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLI 606
Query: 386 HALAVSGHGEYIDEIISKI 404
+ +G+ ++ +I ++
Sbjct: 607 DGFSKAGNTDFAATLIERM 625
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 131/358 (36%), Gaps = 83/358 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+L+ + ++ L K++ GI PN +TY L+ C + + + A +
Sbjct: 500 YNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQ------CDEHDFDNAFR 553
Query: 146 ILEFMRDK--------------------------TFPISEGV------FNALIYGHSQAN 173
+ E M +F + +GV + LI G S+A
Sbjct: 554 LFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAG 613
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS-ELFLCFSF 232
+ A ++ M G P + TY+ L+ K ++ +P L S C F
Sbjct: 614 NTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNE---ALPILDQMSLRGIKCTIF 670
Query: 233 QLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
T L+ +L A+ + M+ +G +PSA TYT + Y K G ++ L+ +
Sbjct: 671 AYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM 730
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV-------C---FVNICF---HWLEGPM- 336
V D + + GH YID + + C + C H L+G +
Sbjct: 731 EREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLA 790
Query: 337 -------------------------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
M + GL P+ TY+ L+ G+ K G ++ LL
Sbjct: 791 YVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLL 848
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 175/454 (38%), Gaps = 94/454 (20%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
++ G PN + + LIS C+ G + A + + M S +NA+I G
Sbjct: 279 MKRDGCSPNVRAF------TFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVG 332
Query: 169 HSQANDMASAEGILTMMS----------------------------------QAGLEPSA 194
+S+ M A I +M + G P+
Sbjct: 333 YSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTV 392
Query: 195 QTYTKLMCGY--AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
T+T L+ GY A+ D D+++ K + + +L L +L N LI + A+ +L
Sbjct: 393 VTFTNLINGYCMAEKFD-DALRMKNKMMSSKCKLDLQVFGKLINSLI-KKDRLKEAKELL 450
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+S GL P+ TYT ++ GY K G +D V +++ + G Y +++ L
Sbjct: 451 NEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV-- 508
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL- 368
+ + + A++ M + G+ P+ TYT L+ G D D+ RL
Sbjct: 509 -KDKKLHKAMALL------------TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 555
Query: 369 --LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGV------------GYSAD- 413
+ QNG Y + AL +G E I ++ GV G+S
Sbjct: 556 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI--VRKGVALTKVYYTTLIDGFSKAG 613
Query: 414 ----AANHIYHLINKGQIDAAYR---IVNTLARSANINGEQLPVGGFLVRHMVKTNQPGV 466
AA I +I++G +Y +++ L + +N E LP+ + +K
Sbjct: 614 NTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLN-EALPILDQMSLRGIKCTIFAY 672
Query: 467 GYSADAANHIYHLINKGQIDAAYRIVNTLARSAN 500
D ++ +G+ D A R+ N + S +
Sbjct: 673 TILID------EMLREGKHDHAKRMYNEMTSSGH 700
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 47/268 (17%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++ S G +P+ TY + I+ YC++G +E A ++ M + +N LI
Sbjct: 694 EMTSSGHKPSATTY------TVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 747
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH---GDMDSIKTKIPSLKPQS 224
G + A L M A EP+ TY L+ KH G++ ++
Sbjct: 748 GCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL----KHLLKGNLAYVR---------- 793
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
S + + L+ D+ +L M + GL P+ TY+ L+ G+ K G ++
Sbjct: 794 ------SVDTSGMWNLIELDITWQ--LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC 845
Query: 285 RLLAQ-SGSSLV-NGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
LL G L N D ++ + ++ ++ + FV+I MS+ G
Sbjct: 846 LLLDHMCGKGLSPNEDIYTLL--IKCCCDTKFFEKA---LSFVSI---------MSECGF 891
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+P ++Y L+ G GD + ++ L
Sbjct: 892 QPQLESYRLLVVGLCNEGDFEKVKSLFC 919
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ G+ P TY S LI+ +C+ G +E A +L+ M K +E ++
Sbjct: 812 LLERMVKHGLNPTVTTY------SSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT 215
LI A +++MS+ G +P ++Y L+ G GD + +K+
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKS 916
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 170/410 (41%), Gaps = 46/410 (11%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD+ + L+ + + + L ++ + G+ PN +TY + +I YC+ G +
Sbjct: 425 LDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY------TSIIDGYCKSGKV 478
Query: 141 EGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A ++L+ M RD P + +N+L+YG + + A +LT M + G+ P+ TYT
Sbjct: 479 DIALEVLKMMERDGCQP-NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTT 537
Query: 200 LMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
L+ G D D+ + LKP + + L AE +
Sbjct: 538 LLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCK--------AGRAEEAYSF 589
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGH 311
+ + G+ + YT L+ G++K G+ D L+ + G + + Y ++HAL
Sbjct: 590 IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKR 649
Query: 312 GE----YIDEVS--AIVCFVNICFHWLEGPM---------------MSQAGLEPSAQTYT 350
+D++S I C + + L M M+ +G +PSA TYT
Sbjct: 650 LNEALPILDQMSLRGIKCTI-FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYT 708
Query: 351 KLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGY 410
+ Y K G ++ L+ + V D + + GH YID S ++ VG
Sbjct: 709 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGA 768
Query: 411 SADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVK 460
S + Y L+ K + V ++ S N +L + L+ MVK
Sbjct: 769 SCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVK 818
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 154/382 (40%), Gaps = 44/382 (11%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ----GIEPNRVTYQQLISNS 128
TG + L YN LR + F T+++ ++ SQ G+ P+ VTY +I +
Sbjct: 138 RTGSARLALSPKCYNFALR----SLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKS- 192
Query: 129 KLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
YC++G++ A + + + NAL+ G+ + ++ A + MM
Sbjct: 193 -----YCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLM 247
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMA 246
G + + +YT L+ G + +K S F+F ++ L S +
Sbjct: 248 GCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGL--CKSGRVG 305
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDII 303
A + M Q G+ PS TY ++ GY+K G M+ ++ L+ ++G + Y +I
Sbjct: 306 DARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI 365
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+ L E + ++ V + G P+ T+T L+ GY D
Sbjct: 366 YGLCDQKTEEAEELLNNAV----------------KEGFTPTVVTFTNLINGYCMAEKFD 409
Query: 364 SIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH--- 417
R+ + SS D + +I++L + E++++I G + +
Sbjct: 410 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISAN-GLVPNVITYTSI 468
Query: 418 IYHLINKGQIDAAYRIVNTLAR 439
I G++D A ++ + R
Sbjct: 469 IDGYCKSGKVDIALEVLKMMER 490
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 117/319 (36%), Gaps = 54/319 (16%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ D + T + L +G P VT+ + LI+ YC + A +
Sbjct: 361 YNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTF------TNLINGYCMAEKFDDALR 413
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M + VF LI + + + A+ +L +S GL P+ TYT ++ GY
Sbjct: 414 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 473
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G +D A +L MM + G +P+A
Sbjct: 474 KSGKVD-----------------------------------IALEVLKMMERDGCQPNAW 498
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
TY LM G K + LL + + + I + + G + D +A F
Sbjct: 499 TYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV--ITYTTLLQGQCDEHDFDNAFRLF- 555
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDII 385
MM Q GL+P Y L K G + + + G +L Y +I
Sbjct: 556 ---------EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLI 606
Query: 386 HALAVSGHGEYIDEIISKI 404
+ +G+ ++ +I ++
Sbjct: 607 DGFSKAGNTDFAATLIERM 625
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 131/358 (36%), Gaps = 83/358 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+L+ + ++ L K++ GI PN +TY L+ C + + + A +
Sbjct: 500 YNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQ------CDEHDFDNAFR 553
Query: 146 ILEFMRDK--------------------------TFPISEGV------FNALIYGHSQAN 173
+ E M +F + +GV + LI G S+A
Sbjct: 554 LFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAG 613
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS-ELFLCFSF 232
+ A ++ M G P + TY+ L+ K ++ +P L S C F
Sbjct: 614 NTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNE---ALPILDQMSLRGIKCTIF 670
Query: 233 QLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
T L+ +L A+ + M+ +G +PSA TYT + Y K G ++ L+ +
Sbjct: 671 AYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM 730
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV-------C---FVNICF---HWLEGPM- 336
V D + + GH YID + + C + C H L+G +
Sbjct: 731 EREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLA 790
Query: 337 -------------------------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
M + GL P+ TY+ L+ G+ K G ++ LL
Sbjct: 791 YVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLL 848
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 175/454 (38%), Gaps = 94/454 (20%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
++ G PN + + LIS C+ G + A + + M S +NA+I G
Sbjct: 279 MKRDGCSPNVRAF------TFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVG 332
Query: 169 HSQANDMASAEGILTMMS----------------------------------QAGLEPSA 194
+S+ M A I +M + G P+
Sbjct: 333 YSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTV 392
Query: 195 QTYTKLMCGY--AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
T+T L+ GY A+ D D+++ K + + +L L +L N LI + A+ +L
Sbjct: 393 VTFTNLINGYCMAEKFD-DALRMKNKMMSSKCKLDLQVFGKLINSLI-KKDRLKEAKELL 450
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+S GL P+ TYT ++ GY K G +D V +++ + G Y +++ L
Sbjct: 451 NEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV-- 508
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL- 368
+ + + A++ M + G+ P+ TYT L+ G D D+ RL
Sbjct: 509 -KDKKLHKAMALL------------TKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF 555
Query: 369 --LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGV------------GYSAD- 413
+ QNG Y + AL +G E I ++ GV G+S
Sbjct: 556 EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI--VRKGVALTKVYYTTLIDGFSKAG 613
Query: 414 ----AANHIYHLINKGQIDAAYR---IVNTLARSANINGEQLPVGGFLVRHMVKTNQPGV 466
AA I +I++G +Y +++ L + +N E LP+ + +K
Sbjct: 614 NTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLN-EALPILDQMSLRGIKCTIFAY 672
Query: 467 GYSADAANHIYHLINKGQIDAAYRIVNTLARSAN 500
D ++ +G+ D A R+ N + S +
Sbjct: 673 TILID------EMLREGKHDHAKRMYNEMTSSGH 700
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 47/268 (17%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++ S G +P+ TY + I+ YC++G +E A ++ M + +N LI
Sbjct: 694 EMTSSGHKPSATTY------TVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 747
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH---GDMDSIKTKIPSLKPQS 224
G + A L M A EP+ TY L+ KH G++ ++
Sbjct: 748 GCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL----KHLLKGNLAYVR---------- 793
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
S + + L+ D+ +L M + GL P+ TY+ L+ G+ K G ++
Sbjct: 794 ------SVDTSGMWNLIELDITWQ--LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC 845
Query: 285 RLLAQ-SGSSLV-NGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
LL G L N D ++ + ++ ++ + FV+I MS+ G
Sbjct: 846 LLLDHMCGKGLSPNEDIYTLL--IKCCCDTKFFEKA---LSFVSI---------MSECGF 891
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+P ++Y L+ G GD + ++ L
Sbjct: 892 QPQLESYRLLVVGLCNEGDFEKVKSLFC 919
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ G+ P TY S LI+ +C+ G +E A +L+ M K +E ++
Sbjct: 812 LLERMVKHGLNPTVTTY------SSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 865
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT 215
LI A +++MS+ G +P ++Y L+ G GD + +K+
Sbjct: 866 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKS 916
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 117/285 (41%), Gaps = 30/285 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y A++ Y + L + G+EPN TY LI+ +C+ G +E
Sbjct: 281 DVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLING------FCKIGQME 334
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L M+ + +++ +FN +I G+ + + A I M + G+E TY L
Sbjct: 335 AAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLA 394
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQA 258
CG + +D KT L E+ + ++ LI + DM A + M++
Sbjct: 395 CGLCRVNRLDEAKTL---LHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEK 451
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
G PS TY ++ GY K G + R + D Y ++H V+G
Sbjct: 452 GATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGK---- 507
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
V++ E M Q G EP+ YT L+ G AK G
Sbjct: 508 ---------VDVALKLFE--EMKQRGTEPNVVAYTALISGLAKEG 541
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 121/277 (43%), Gaps = 26/277 (9%)
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
++ S ++ C+ G ++ A ++L+ M ++ +N+L+ + + D + IL +
Sbjct: 178 LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 237
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
M G+E + TYT L+ + D+ ++ +K + + + + + +
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 297
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG-----------SS 293
M A +L G+EP+ +TY L+ G+ K G M++ LLA ++
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357
Query: 294 LVNG--------DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP----MMSQAG 341
+++G D L I A+ G I + + C + E +M + G
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSS 375
+ P+ TYT L+ + K GDM RRL +A+ G++
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGAT 454
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ Y F ++E +G P+ TY + L+ +C +G ++ A K
Sbjct: 460 YNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTY------ASLVHGHCVNGKVDVALK 513
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ E M+ + + + ALI G ++ +A + M +AGL P Y+ L+
Sbjct: 514 LFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 569
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 155/359 (43%), Gaps = 35/359 (9%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ S G+ PNR TY + LI + ++GNIE A +I + M + ++ +NA+I G
Sbjct: 337 MPSSGLNPNRFTY------TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGG 390
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
++A +MA A + M AG+EP TY L+ GY K DM + +K +
Sbjct: 391 IAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPS 450
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
F++ + + SSD+ A +L M + G++P+ Y L+ Y + + LL
Sbjct: 451 PFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510
Query: 289 QSGSSLVNGDYLDII-HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
+ NG D+ + + G A + V+ M + G++P+A
Sbjct: 511 ---IMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD----------MGEKGIKPNAH 557
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPG 407
TY + Y+K G++ R SS + + ++I+ + + GH +
Sbjct: 558 TYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN--NVIYTILIKGHCD------------ 603
Query: 408 VGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGV 466
VG + +A + ++ KG I R + + S + NG+ G ++ + P V
Sbjct: 604 VGNTVEALSTFKCMLEKGLI-PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDV 661
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 20/217 (9%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D+ Y +++ + L+++E + +PN TY I CQ G
Sbjct: 239 VP-DVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-CKPNLFTYNAFIGG------LCQTG 290
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A ++ + M +K + L+ G + A+ I M +GL P+ TYT
Sbjct: 291 AVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELF---LCFSFQLTNLL---ILVSSDMASAEGIL 252
L+ G+ K G+++ +L+ + E+ L + N + I + +MA A +
Sbjct: 351 ALIDGFIKEGNIEE------ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLF 404
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
M AG+EP TY L+ GY K DM LLA+
Sbjct: 405 NEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAE 441
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 40/298 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L+ YL + + LA+++++ + P+ TY S LIS C +++
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTY------SVLISGLCHSSDLQ 468
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L+ M + ++ LI + Q + A +L +M G+ P Y L+
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528
Query: 202 CGYAKHGDMDSIKTKI-----PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
G + ++ K + +KP + + F NL S ++ AE M
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAF----INLYS-KSGEIQVAERYFKDML 583
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG------DYLDIIHALAVSG 310
+G+ P+ YT L+ G H D+ + L+ L G Y IIH+L S
Sbjct: 584 SSGIVPNNVIYTILIKG---HCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSL--SK 638
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
+G+ + + + F+ + G+ P Y L+ G+ K GD++ +L
Sbjct: 639 NGKTKEAMGVFLKFL-------------KTGVVPDVFLYNSLISGFCKEGDIEKASQL 683
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 114/305 (37%), Gaps = 31/305 (10%)
Query: 72 VHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLI 131
V GE + + Y A + +Y + + + S GI PN V Y + LI
Sbjct: 545 VDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIY------TILI 598
Query: 132 SKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
+C GN A + M +K ++A+I+ S+ A G+ + G+
Sbjct: 599 KGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV 658
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMA 246
P Y L+ G+ K GD++ + P + ++ + + S ++
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN---IVVYNTLINDYGYCKSGNLT 715
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
A + M G+ P Y L+ G K G+++ L ++ V L ++L
Sbjct: 716 EAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGS--LSAFNSL 773
Query: 307 --AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
+ HG+ I+ A F + M L P+ TYT L+ Y K M+
Sbjct: 774 IDSFCKHGKVIE---ARELFDD----------MVDKKLTPNIVTYTILIDAYGKAEMMEE 820
Query: 365 IRRLL 369
+L
Sbjct: 821 AEQLF 825
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 99/255 (38%), Gaps = 52/255 (20%)
Query: 157 ISEGVFNALIYGHS------QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210
ISEG F LI ++ +AN M + M +A + P TYT ++ + K GD+
Sbjct: 199 ISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDV 258
Query: 211 DSIKTKIPSLKPQSE--LF--------LCFSFQLTNLLILVSSDMASAEG---------- 250
K + ++ + + LF LC + + L + M G
Sbjct: 259 IKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLV 318
Query: 251 --------------ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN 296
I M +GL P+ TYT L+ G+ K G+++ R+ +
Sbjct: 319 DGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRI---KDEMITR 375
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY 356
G L+++ A+ G E++ + N M AG+EP TY L+ GY
Sbjct: 376 GLKLNVVTYNAMIGGIAKAGEMAKAMSLFN---------EMLMAGIEPDTWTYNLLIDGY 426
Query: 357 AKHGDMDSIRRLLAQ 371
K DM LLA+
Sbjct: 427 LKSHDMAKACELLAE 441
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +LL Y + F +E++GI + + Y + S YC++G A K
Sbjct: 840 YTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAY------GVMASAYCKEGKSLEALK 893
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L + + + VF+ALI+ + +++ +L+ M + L S++T L+ G+
Sbjct: 894 LLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFY 953
Query: 206 KHGDMD 211
K G+ D
Sbjct: 954 KSGNED 959
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 26/268 (9%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
+++ QGI P+ V Y + LI +C+ G+I A+K M + + A+
Sbjct: 782 FSEMIRQGILPDTVVY------TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 835
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTKIPSLKPQS 224
I G Q DM A + M GLEP + T+T+L+ GY K G M D+ + ++
Sbjct: 836 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 895
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ L + L D+ SA +L M + GL+P+ TY ++ G K G+++
Sbjct: 896 SPNVVTYTTLIDGLC-KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 954
Query: 285 RLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
+L+ + ++ +N D Y ++ A SG +D+ I+ M G
Sbjct: 955 KLVGEFEAAGLNADTVTYTTLMDAYCKSGE---MDKAQEIL------------KEMLGKG 999
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
L+P+ T+ LM G+ HG ++ +LL
Sbjct: 1000 LQPTIVTFNVLMNGFCLHGMLEDGEKLL 1027
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 150/337 (44%), Gaps = 31/337 (9%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E+ V +++ YN ++ L +E +G P+ ++Y S +++ YC
Sbjct: 682 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY------STVVNGYC 735
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G ++ K++E M+ K + ++ ++I + +A AE + M + G+ P
Sbjct: 736 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 795
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMASAEGILT 253
YT L+ G+ K GD+ + + + + L ++ ++ + DM A +
Sbjct: 796 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI--GDMVEAGKLFH 853
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSG 310
M GLEP + T+T+L+ GY K G M R+ + Q+G S Y +I L G
Sbjct: 854 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 913
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+ +E+ H M + GL+P+ TY ++ G K G+++ +L+
Sbjct: 914 DLDSANEL----------LH-----EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 958
Query: 371 QNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI 404
+ ++ +N D Y ++ A SG + EI+ ++
Sbjct: 959 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 995
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 133/336 (39%), Gaps = 64/336 (19%)
Query: 67 EDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS 126
E+ FS + +P D Y L+ + + + F ++ S+ I P+ +TY
Sbjct: 779 EEAFSEMIRQGILP-DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY----- 832
Query: 127 NSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMS 186
+ +IS +CQ G++ A K+ M K F LI G+ +A M A + M
Sbjct: 833 -TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 891
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKT---KIPSLKPQSELF--------LCFSFQLT 235
QAG P+ TYT L+ G K GD+DS ++ + Q +F LC S +
Sbjct: 892 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 951
Query: 236 NLLILV------------------------SSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+ LV S +M A+ IL M GL+P+ T+ LM
Sbjct: 952 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 1011
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
G+ HG + + G L+N + A ++ + + + C N
Sbjct: 1012 NGFCLHG--------MLEDGEKLLNW-----MLAKGIAPNATTFNSLVKQYCIRNN---- 1054
Query: 332 LEGPM-----MSQAGLEPSAQTYTKLMCGYAKHGDM 362
L+ M G+ P +TY L+ G+ K +M
Sbjct: 1055 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 1090
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
++GI PN T+ + L+ +YC N++ AT I + M + + L+ GH
Sbjct: 1032 AKGIAPNATTF------NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 1085
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 207
+A +M A + M G S TY+ L+ G+ K
Sbjct: 1086 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 1122
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 152/361 (42%), Gaps = 39/361 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N LL + + ++ +G+EP+ TY S LI +C+ N+ A +
Sbjct: 358 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTY------SLLIEGHCRGQNMARAFE 411
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M+ + + ++ +I G + ++ IL M GL+P+A YT LM +A
Sbjct: 412 LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA 471
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G ++ + + ++ Q L F + + + M A L M + L P+A
Sbjct: 472 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 531
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ--SGSSLVN-GDYLDIIHALAVSGHGEYIDEVSAIV 322
TY + GY+K G+M+ R + S L N G Y +I G+ + E ++
Sbjct: 532 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGN---VTEAFSVF 588
Query: 323 CFV------------NICFHWL--EGPM---------MSQAGLEPSAQTYTKLMCGYAKH 359
F+ ++ H L G M + + GL P+A TY L+ G K
Sbjct: 589 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQ 648
Query: 360 GDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAAN 416
G++D +LL + +N D Y +I L +G E + I+ G G + +
Sbjct: 649 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE-GRGLTPNCVT 707
Query: 417 H 417
+
Sbjct: 708 Y 708
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 146/376 (38%), Gaps = 46/376 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ N ++L+ +G+ PN TY LIS S C+ GN++
Sbjct: 599 DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS------CKQGNVD 652
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A+++LE M K +N LI G +A ++ A+ + + GL P+ TY ++
Sbjct: 653 KASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMV 712
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL------CFSFQLTNLLILVSSDMASAEGILTMM 255
GY K K + + E+ L F + + A + M
Sbjct: 713 DGYCKS------KNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM 766
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY- 314
+ G S ++ L+ GY K G + LL + +I + H Y
Sbjct: 767 LEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEE------------MIEKQFIPNHVTYT 813
Query: 315 --IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
ID WLE M + + P+A+TYT L+ GY G+M + L +
Sbjct: 814 SLIDHNCKAGMMGEAKRLWLE---MQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 870
Query: 373 GSSLVNGD---YLDIIHALAVSGH----GEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
+ + D Y +I A G+ + DEI+ K P + DA I L K
Sbjct: 871 VAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDAL--IQALCKKE 928
Query: 426 QIDAAYRIVNTLARSA 441
+ +++N + S
Sbjct: 929 EFFEVLKLLNEIGESG 944
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 126/298 (42%), Gaps = 34/298 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y ++ + + L ++ +G PN VTY +I C+ ++
Sbjct: 214 DVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGG------LCRARLLD 267
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ M DK ++ LI G A+ +L M GL+P TY L+
Sbjct: 268 EAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALI 327
Query: 202 CGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMS 256
G+ + GD++ IK ++ + ++ L + LL + + M A I+ M
Sbjct: 328 DGFMRQGDIEQAFRIKDEMVACGIEANLII-----WNTLLNGVCKAGKMEKALEIMQEMM 382
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGE 313
+ G+EP +QTY+ L+ G+ + +M LL + + L II+ L G+
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN-- 440
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ +AI+ M GL+P+A YT LM +AK G ++ R +L +
Sbjct: 441 -LQGTNAIL------------REMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 485
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D YN +L E D ++ +G + +S + LI YC+ G
Sbjct: 736 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-------FASTVSFNTLIEGYCKSG 788
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A +LE M +K F + + +LI + +A M A+ + M + + P+A+TYT
Sbjct: 789 KLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYT 848
Query: 199 KLMCGYAKHGDMDSI 213
L+ GY G+M +
Sbjct: 849 SLLHGYHNIGNMSEV 863
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 61/126 (48%), Gaps = 6/126 (4%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +LL Y + + + ++ ++GIEP+++TY +I YC++GN+ A K
Sbjct: 847 YTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMID------AYCREGNVMEACK 900
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + + K P+S ++ALI + + +L + ++G T + + G+
Sbjct: 901 LKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQ 960
Query: 206 KHGDMD 211
G+MD
Sbjct: 961 IAGNMD 966
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 152/361 (42%), Gaps = 39/361 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N LL + + ++ +G+EP+ TY S LI +C+ N+ A +
Sbjct: 349 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTY------SLLIEGHCRGQNMARAFE 402
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M+ + + ++ +I G + ++ IL M GL+P+A YT LM +A
Sbjct: 403 LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA 462
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G ++ + + ++ Q L F + + + M A L M + L P+A
Sbjct: 463 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 522
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ--SGSSLVN-GDYLDIIHALAVSGHGEYIDEVSAIV 322
TY + GY+K G+M+ R + S L N G Y +I G+ + E ++
Sbjct: 523 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGN---VTEAFSVF 579
Query: 323 CFV------------NICFHWL--EGPM---------MSQAGLEPSAQTYTKLMCGYAKH 359
F+ ++ H L G M + + GL P+A TY L+ G K
Sbjct: 580 RFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQ 639
Query: 360 GDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAAN 416
G++D +LL + +N D Y +I L +G E + I+ G G + +
Sbjct: 640 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE-GRGLTPNCVT 698
Query: 417 H 417
+
Sbjct: 699 Y 699
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 133/341 (39%), Gaps = 44/341 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ N ++L+ +G+ PN TY LIS S C+ GN++
Sbjct: 590 DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGS------CKQGNVD 643
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A+++LE M K +N LI G +A ++ A+ + + GL P+ TY ++
Sbjct: 644 KASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMV 703
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL------CFSFQLTNLLILVSSDMASAEGILTMM 255
GY K K + + E+ L F + + A + M
Sbjct: 704 DGYCKS------KNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEM 757
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY- 314
+ G S ++ L+ GY K G + LL + +I + H Y
Sbjct: 758 LEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEE------------MIEKQFIPNHVTYT 804
Query: 315 --IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
ID WLE M + + P+A+TYT L+ GY G+M + L +
Sbjct: 805 SLIDHNCKAGMMGEAKRLWLE---MQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEM 861
Query: 373 GSSLVNGD---YLDIIHALAVSGH----GEYIDEIISKIQP 406
+ + D Y +I A G+ + DEI+ K P
Sbjct: 862 VAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMP 902
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 122/281 (43%), Gaps = 51/281 (18%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV-------------- 161
P+ TY + +IS +C+ GN++ A ++L M +K + E +
Sbjct: 222 PDVYTY------TNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPD 275
Query: 162 ---FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKT 215
++ LI G A+ +L M GL+P TY L+ G+ + GD++ IK
Sbjct: 276 LYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKD 335
Query: 216 KIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCG 273
++ + ++ L + LL + + M A I+ M + G+EP +QTY+ L+ G
Sbjct: 336 EMVACGIEANLII-----WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG 390
Query: 274 YAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYIDEVSAIVCFVNICFH 330
+ + +M LL + + L II+ L G+ + +AI+
Sbjct: 391 HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGN---LQGTNAIL-------- 439
Query: 331 WLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M GL+P+A YT LM +AK G ++ R +L +
Sbjct: 440 ----REMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILER 476
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D YN +L E D ++ +G + +S + LI YC+ G
Sbjct: 727 VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-------FASTVSFNTLIEGYCKSG 779
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A +LE M +K F + + +LI + +A M A+ + M + + P+A+TYT
Sbjct: 780 KLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYT 839
Query: 199 KLMCGYAKHGDMDSI 213
L+ GY G+M +
Sbjct: 840 SLLHGYHNIGNMSEV 854
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 26/268 (9%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
+++ QGI P+ V Y + LI +C+ G+I A+K M + + A+
Sbjct: 339 FSEMIRQGILPDTVVY------TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTKIPSLKPQS 224
I G Q DM A + M GLEP + T+T+L+ GY K G M D+ + ++
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ L + L D+ SA +L M + GL+P+ TY ++ G K G+++
Sbjct: 453 SPNVVTYTTLIDGLC-KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 285 RLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
+L+ + ++ +N D Y ++ A SG +D+ I+ M G
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGE---MDKAQEIL------------KEMLGKG 556
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
L+P+ T+ LM G+ HG ++ +LL
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLL 584
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 150/337 (44%), Gaps = 31/337 (9%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E+ V +++ YN ++ L +E +G P+ ++Y S +++ YC
Sbjct: 239 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISY------STVVNGYC 292
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G ++ K++E M+ K + ++ ++I + +A AE + M + G+ P
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMASAEGILT 253
YT L+ G+ K GD+ + + + + L ++ ++ + DM A +
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI--GDMVEAGKLFH 410
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSG 310
M GLEP + T+T+L+ GY K G M R+ + Q+G S Y +I L G
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEG 470
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+ +E+ H M + GL+P+ TY ++ G K G+++ +L+
Sbjct: 471 DLDSANEL----------LH-----EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 371 QNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI 404
+ ++ +N D Y ++ A SG + EI+ ++
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEM 552
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 133/336 (39%), Gaps = 64/336 (19%)
Query: 67 EDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS 126
E+ FS + +P D Y L+ + + + F ++ S+ I P+ +TY
Sbjct: 336 EEAFSEMIRQGILP-DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY----- 389
Query: 127 NSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMS 186
+ +IS +CQ G++ A K+ M K F LI G+ +A M A + M
Sbjct: 390 -TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKT---KIPSLKPQSELF--------LCFSFQLT 235
QAG P+ TYT L+ G K GD+DS ++ + Q +F LC S +
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 236 NLLILV------------------------SSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+ LV S +M A+ IL M GL+P+ T+ LM
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
G+ HG + + G L+N + A ++ + + + C N
Sbjct: 569 NGFCLHG--------MLEDGEKLLNW-----MLAKGIAPNATTFNSLVKQYCIRNN---- 611
Query: 332 LEGPM-----MSQAGLEPSAQTYTKLMCGYAKHGDM 362
L+ M G+ P +TY L+ G+ K +M
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
++GI PN T+ + L+ +YC N++ AT I + M + + L+ GH
Sbjct: 589 AKGIAPNATTF------NSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 207
+A +M A + M G S TY+ L+ G+ K
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/362 (22%), Positives = 143/362 (39%), Gaps = 60/362 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN ++ + +FL+++ +GI P+ VTY ++ +C G +
Sbjct: 235 NVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHG------FCSLGQLN 288
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
AT++ + M + FN L+ G + ++ A + M++ G EP+A TY LM
Sbjct: 289 EATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALM 348
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY H MD A +L +M G
Sbjct: 349 DGYCLHNQMD-----------------------------------EAIKVLGIMIGKGCA 373
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P+ +Y L+ GY K M+ +RLL++ + D + ++ + G + A+
Sbjct: 374 PNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPD--TVTYSTLMQGLCQVGRPREAL 431
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD- 380
F +C +GL P Y+ L+ G+ KHG +D +LL + + +
Sbjct: 432 NLFKEMC----------SSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNI 481
Query: 381 --YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVN 435
Y +I + ++G E E+ SK+ G D + I L+ +G D AY
Sbjct: 482 ILYTILIRGMFIAGKLEVAKELFSKLSAD-GIRPDIWTYNVMIKGLLKEGLSDEAYEFFR 540
Query: 436 TL 437
+
Sbjct: 541 KM 542
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 170/412 (41%), Gaps = 46/412 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
LD+ + L+ + + + L ++ + G+ PN +TY + +I YC+ G
Sbjct: 308 CKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITY------TSIIDGYCKSG 361
Query: 139 NIEGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
++ A ++L+ M RD P + +N+L+YG + + A +LT M + G+ P+ TY
Sbjct: 362 KVDIALEVLKMMERDGCQP-NAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITY 420
Query: 198 TKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
T L+ G D D+ + LKP + + L AE
Sbjct: 421 TTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCK--------AGRAEEAY 472
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVS 309
+ + + G+ + YT L+ G++K G+ D L+ + G + + Y ++HAL
Sbjct: 473 SFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQ 532
Query: 310 GHGE----YIDEVS--AIVCFVNICFHWLEGPM---------------MSQAGLEPSAQT 348
+D++S I C + + L M M+ +G +PSA T
Sbjct: 533 KRLNEALPILDQMSLRGIKCTI-FAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATT 591
Query: 349 YTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGV 408
YT + Y K G ++ L+ + V D + + GH YID S ++ V
Sbjct: 592 YTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 651
Query: 409 GYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVK 460
G S + Y L+ K + V ++ S N +L + L+ MVK
Sbjct: 652 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVK 703
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 154/382 (40%), Gaps = 44/382 (11%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ----GIEPNRVTYQQLISNS 128
TG + L YN LR + F T+++ ++ SQ G+ P+ VTY +I +
Sbjct: 23 RTGSARLALSPKCYNFALR----SLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKS- 77
Query: 129 KLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
YC++G++ A + + + NAL+ G+ + ++ A + MM
Sbjct: 78 -----YCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLM 132
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMA 246
G + + +YT L+ G + +K S F+F ++ L S +
Sbjct: 133 GCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGL--CKSGRVG 190
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDII 303
A + M Q G+ PS TY ++ GY+K G M+ ++ L+ ++G + Y +I
Sbjct: 191 DARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI 250
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+ L E + ++ V + G P+ T+T L+ GY D
Sbjct: 251 YGLCDQKTEEAEELLNNAV----------------KEGFTPTVVTFTNLINGYCMAEKFD 294
Query: 364 SIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH--- 417
R+ + SS D + +I++L + E++++I G + +
Sbjct: 295 DALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISAN-GLVPNVITYTSI 353
Query: 418 IYHLINKGQIDAAYRIVNTLAR 439
I G++D A ++ + R
Sbjct: 354 IDGYCKSGKVDIALEVLKMMER 375
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 151/418 (36%), Gaps = 81/418 (19%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ D + T + L +G P VT+ + LI+ YC + A +
Sbjct: 246 YNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTF------TNLINGYCMAEKFDDALR 298
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M + VF LI + + + A+ +L +S GL P+ TYT ++ GY
Sbjct: 299 MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYC 358
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G +D A +L MM + G +P+A
Sbjct: 359 KSGKVD-----------------------------------IALEVLKMMERDGCQPNAW 383
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
TY LM G K + LL + + + I + + G + D +A F
Sbjct: 384 TYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNV--ITYTTLLQGQCDEHDFDNAFRLF- 440
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDII 385
MM Q GL+P Y L K G + + + G +L Y +I
Sbjct: 441 ---------EMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLI 491
Query: 386 HALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYR---IVNTLARSAN 442
+ +G+ ++ AA I +I++G +Y +++ L +
Sbjct: 492 DGFSKAGNTDF-----------------AATLIERMIDEGCTPDSYTYSVLLHALCKQKR 534
Query: 443 INGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSAN 500
+N E LP+ + +K D ++ +G+ D A R+ N + S +
Sbjct: 535 LN-EALPILDQMSLRGIKCTIFAYTILID------EMLREGKHDHAKRMYNEMTSSGH 585
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 131/358 (36%), Gaps = 83/358 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+L+ + ++ L K++ GI PN +TY L+ C + + + A +
Sbjct: 385 YNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQ------CDEHDFDNAFR 438
Query: 146 ILEFMRDK--------------------------TFPISEGV------FNALIYGHSQAN 173
+ E M +F + +GV + LI G S+A
Sbjct: 439 LFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAG 498
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS-ELFLCFSF 232
+ A ++ M G P + TY+ L+ K ++ +P L S C F
Sbjct: 499 NTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNE---ALPILDQMSLRGIKCTIF 555
Query: 233 QLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
T L+ +L A+ + M+ +G +PSA TYT + Y K G ++ L+ +
Sbjct: 556 AYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKM 615
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV-------C---FVNICF---HWLEGPM- 336
V D + + GH YID + + C + C H L+G +
Sbjct: 616 EREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLA 675
Query: 337 -------------------------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
M + GL P+ TY+ L+ G+ K G ++ LL
Sbjct: 676 YVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLL 733
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 47/268 (17%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++ S G +P+ TY + I+ YC++G +E A ++ M + +N LI
Sbjct: 579 EMTSSGHKPSATTY------TVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILID 632
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH---GDMDSIKTKIPSLKPQS 224
G + A L M A EP+ TY L+ KH G++ ++
Sbjct: 633 GCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLL----KHLLKGNLAYVR---------- 678
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
S + + L+ D+ +L M + GL P+ TY+ L+ G+ K G ++
Sbjct: 679 ------SVDTSGMWNLIELDITWQ--LLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEAC 730
Query: 285 RLLAQ-SGSSLV-NGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
LL G L N D ++ + ++ ++ + FV+I MS+ G
Sbjct: 731 LLLDHMCGKGLSPNEDIYTLL--IKCCCDTKFFEKALS---FVSI---------MSECGF 776
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+P ++Y L+ G GD + ++ L
Sbjct: 777 QPQLESYRLLVVGLCNEGDFEKVKSLFC 804
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ G+ P TY S LI+ +C+ G +E A +L+ M K +E ++
Sbjct: 697 LLERMVKHGLNPTVTTY------SSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 750
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT 215
LI A +++MS+ G +P ++Y L+ G GD + +K+
Sbjct: 751 LIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKS 801
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 87.8 bits (216), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 110/231 (47%), Gaps = 16/231 (6%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V D+ YNAL+ + + D + ++ G++P++VTY LI C++G
Sbjct: 378 VKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGC------CKEG 431
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A ++ + M D+ + + + ALI G S+A AE IL M +AGL+P TYT
Sbjct: 432 ELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYT 491
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKP-----QSELFLCFSFQLTNLLILVSSDMASAEGILT 253
++ + K+GD +KT LK ++ + ++ + L M +A+ +L
Sbjct: 492 MVIDAFCKNGD---VKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSL--GQMKNADMLLN 546
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
M G+ P+ TY L+ G+ KHG + L + G G Y +I+
Sbjct: 547 AMLNIGVCPNDITYNILLDGHCKHGKVRDTEELKSAKGMVSDFGVYTSLIN 597
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 135/301 (44%), Gaps = 30/301 (9%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK 129
F +H + VP + +N L+R + + S + ++ +G++P VT+ L+S
Sbjct: 229 FYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSG-- 286
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
C+ ++ A + M + A I G + + A + M + G
Sbjct: 287 ----MCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERG 342
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
L P+ T L+ + K GD+ + ++ ++ + +++L + L N V DM
Sbjct: 343 LNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNA--LVNGFCRV-RDMK 399
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDII 303
+A I+ M + GL+P TYT L+ G K G++D+ +++ ++ G +L + Y +I
Sbjct: 400 AANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALI 459
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
L+ +G + I+C M +AGL+P TYT ++ + K+GD+
Sbjct: 460 SGLSKAGRSV---DAERILC------------EMMEAGLQPDNTTYTMVIDAFCKNGDVK 504
Query: 364 S 364
+
Sbjct: 505 T 505
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/308 (21%), Positives = 126/308 (40%), Gaps = 24/308 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y A ++ + ++ +G+ PN V + LI +C++G++
Sbjct: 311 DVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVL------TTLIDAHCKEGDVT 364
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
++ M + +NAL+ G + DM +A I+ M + GL+P TYT L+
Sbjct: 365 AGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLI 424
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K G++D+ + + ++ + + AE IL M +AGL+
Sbjct: 425 DGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQ 484
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG---DYLDIIHALAVSGHGEYIDEV 318
P TYT ++ + K+GD+ + + L + + N Y +++ G + D +
Sbjct: 485 PDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADML 544
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
+ + +C P+ TY L+ G+ KHG + L + G
Sbjct: 545 LNAMLNIGVC---------------PNDITYNILLDGHCKHGKVRDTEELKSAKGMVSDF 589
Query: 379 GDYLDIIH 386
G Y +I+
Sbjct: 590 GVYTSLIN 597
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 132/307 (42%), Gaps = 30/307 (9%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
GELDV + Y L+ + + K++ GI PN TY + +I +
Sbjct: 213 GELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY------NSMICRC 266
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C DG + A ++ + MR++ + +N LI G Q + AE ++ M + GL P+
Sbjct: 267 CNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNL 326
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
+Y L+ GY G++D + +K + S N+LI S+ ++ G+ M
Sbjct: 327 ISYNTLIDGYCSIGNLDKASSLFNQMKSSGQ---SPSLATYNILIAGFSEAKNSAGVTDM 383
Query: 255 ---MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAV 308
M GL PS TYT LM + +++ ++ + + + D Y +IH L V
Sbjct: 384 VREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCV 443
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
G + E S + F L+ + L+P+ Y ++ GY K G RL
Sbjct: 444 VGD---MKEASKL-------FKSLD-----EMHLKPNDVIYNTMIYGYCKEGSSYRALRL 488
Query: 369 LAQNGSS 375
L + G +
Sbjct: 489 LKEMGEN 495
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 126/323 (39%), Gaps = 31/323 (9%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+V LD+ + +++ + + + L ++E G+ PN V Y LI C++
Sbjct: 146 NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGC------CKN 199
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G+IE ++ M + ++ + LI G + + M G+ P+ TY
Sbjct: 200 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 259
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMM 255
++C G +++ ++ + C L+ + + AE ++ M
Sbjct: 260 NSMICRCCNDGKLNNAFELFDEMRERG--VACNVVTYNTLIGGLCQERRVLEAERLMCRM 317
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHG 312
+ GL P+ +Y L+ GY G++D L Q SG S Y +I + + +
Sbjct: 318 KRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNS 377
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
+ ++ M GL PS TYT LM + +++ ++ +
Sbjct: 378 AGVTDMVR---------------EMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSM 422
Query: 373 GSSLVNGD---YLDIIHALAVSG 392
+ + D Y +IH L V G
Sbjct: 423 EKAGLVADIYIYGVLIHGLCVVG 445
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 132/307 (42%), Gaps = 30/307 (9%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
GELDV + Y L+ + + K++ GI PN TY + +I +
Sbjct: 226 GELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY------NSMICRC 279
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C DG + A ++ + MR++ + +N LI G Q + AE ++ M + GL P+
Sbjct: 280 CNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNL 339
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
+Y L+ GY G++D + +K + S N+LI S+ ++ G+ M
Sbjct: 340 ISYNTLIDGYCSIGNLDKASSLFNQMKSSGQ---SPSLATYNILIAGFSEAKNSAGVTDM 396
Query: 255 ---MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAV 308
M GL PS TYT LM + +++ ++ + + + D Y +IH L V
Sbjct: 397 VREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCV 456
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
G + E S + F L+ + L+P+ Y ++ GY K G RL
Sbjct: 457 VGD---MKEASKL-------FKSLD-----EMHLKPNDVIYNTMIYGYCKEGSSYRALRL 501
Query: 369 LAQNGSS 375
L + G +
Sbjct: 502 LKEMGEN 508
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 126/323 (39%), Gaps = 31/323 (9%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+V LD+ + +++ + + + L ++E G+ PN V Y LI C++
Sbjct: 159 NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGC------CKN 212
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G+IE ++ M + ++ + LI G + + M G+ P+ TY
Sbjct: 213 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 272
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMM 255
++C G +++ ++ + C L+ + + AE ++ M
Sbjct: 273 NSMICRCCNDGKLNNAFELFDEMRERG--VACNVVTYNTLIGGLCQERRVLEAERLMCRM 330
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHG 312
+ GL P+ +Y L+ GY G++D L Q SG S Y +I + + +
Sbjct: 331 KRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNS 390
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
+ ++ M GL PS TYT LM + +++ ++ +
Sbjct: 391 AGVTDMVR---------------EMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSM 435
Query: 373 GSSLVNGD---YLDIIHALAVSG 392
+ + D Y +IH L V G
Sbjct: 436 EKAGLVADIYIYGVLIHGLCVVG 458
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 111/266 (41%), Gaps = 30/266 (11%)
Query: 101 SPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEG 160
P L + G+EPN TY LI+ +C+ G +E A +L M+ + +++
Sbjct: 91 GPPKVLDECVGNGVEPNERTYGVLING------FCKIGQMEAAEMLLADMQGQGVGLNQI 144
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
+FN +I G+ + + A I M + G+E TY L CG + +D KT L
Sbjct: 145 IFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKT---LL 201
Query: 221 KPQSELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
E+ + ++ LI + DM A + M++ G PS TY ++ GYAK
Sbjct: 202 HIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKK 261
Query: 278 GDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
G + R + D Y ++H V+G V++ E
Sbjct: 262 GSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGK-------------VDVALKLFE- 307
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHG 360
M Q G EP+ YT L+ G AK G
Sbjct: 308 -EMKQRGTEPNVVAYTALISGLAKEG 332
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 85/208 (40%), Gaps = 51/208 (24%)
Query: 76 ELDVPLDISHYN----ALLRV-YLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKL 130
++ V LDI YN L RV LD T L + G+ PN VTY + L
Sbjct: 171 KMGVELDIYTYNTLACGLCRVNRLDEAKTL-----LHIMIEMGVVPNYVTY------TTL 219
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
IS +C+DG++ A ++ M +K S +N +I+G+++ + AE M + G
Sbjct: 220 ISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGF 279
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
P TY L+ G+ +G +D +LK
Sbjct: 280 VPDVYTYASLVHGHCVNGKVDV------ALK----------------------------- 304
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ M Q G EP+ YT L+ G AK G
Sbjct: 305 LFEEMKQRGTEPNVVAYTALISGLAKEG 332
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 144/357 (40%), Gaps = 49/357 (13%)
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
++ S ++ C+ G ++ A ++L+ M ++ +N+L+ + + D + IL +
Sbjct: 15 LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 74
Query: 185 MSQAGL------------------------EPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
M G+ EP+ +TY L+ G+ K G M++ + + +
Sbjct: 75 MENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADM 134
Query: 221 KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
+ Q F + A I M + G+E TY L CG + +
Sbjct: 135 QGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRL 194
Query: 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
D + LL V +Y + + +S H + D V A F M++
Sbjct: 195 DEAKTLLHIMIEMGVVPNY--VTYTTLISIHCKDGDMVEARRLFRE----------MAEK 242
Query: 341 GLEPSAQTYTKLMCGYAKHGDM---DSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYI 397
G PS TY ++ GYAK G + + R+ + + G Y ++H V+G +
Sbjct: 243 GATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVA 302
Query: 398 DEIISKI-QPG-----VGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQL 448
++ ++ Q G V Y+A I L +G+ +AA+++ + + ++ I + L
Sbjct: 303 LKLFEEMKQRGTEPNVVAYTA----LISGLAKEGRSEAAFQLYDDMLKAGLIPDDSL 355
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ Y F ++E +G P+ TY + L+ +C +G ++ A K
Sbjct: 251 YNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTY------ASLVHGHCVNGKVDVALK 304
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ E M+ + + + ALI G ++ +A + M +AGL P Y+ L+
Sbjct: 305 LFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 360
>gi|47218220|emb|CAF97084.1| unnamed protein product [Tetraodon nigroviridis]
Length = 92
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 51/68 (75%), Gaps = 5/68 (7%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L D+SHYNALL+VYL NE FSPTDFLAK+E+ I+PNRV I+ +LI+ YCQ
Sbjct: 30 LGAQYDVSHYNALLKVYLQNEFKFSPTDFLAKMEAANIQPNRV-----ITYQRLIAAYCQ 84
Query: 137 DGNIEGAT 144
+G+IEGAT
Sbjct: 85 NGDIEGAT 92
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 87.0 bits (214), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 121/312 (38%), Gaps = 64/312 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN++L Y + FL K+ S G+EP+ VTY S L+ C++G
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTY------SLLMDYLCKNGRCM 318
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A KI + M + + L+ G++ + G+L +M + G+ P ++ L+
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
C YAK G +D + L FS M Q GL
Sbjct: 379 CAYAKQGKVD-------------QAMLVFS----------------------KMRQQGLN 403
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDE- 317
P+A TY ++ K G ++ Q G S N Y +IH L E +E
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463
Query: 318 ----VSAIVCFVNICF------HWLEG---------PMMSQAGLEPSAQTYTKLMCGYAK 358
+ +C I F H EG +M + G++P+ TY L+ GY
Sbjct: 464 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCL 523
Query: 359 HGDMDSIRRLLA 370
G MD +LL+
Sbjct: 524 AGKMDEAMKLLS 535
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 133/333 (39%), Gaps = 26/333 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFL---AKLESQGIEPNRVTYQQLISNSKLIS 132
EL ++ YN LL+ D + + L A G P+ V+Y + +I+
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY------TTVIN 204
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ ++G+ + A M D+ +N++I +A M A +L M + G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
TY ++ GY G + ++ ++ L + + A I
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD-YLDIIHALAVSGH 311
M++ GL+P TY L+ GYA G + + LL + ++ D Y+ I A +
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
G+ +D+ A++ F M Q GL P+A TY ++ K G ++ Q
Sbjct: 385 GK-VDQ--AMLVF----------SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 372 ---NGSSLVNGDYLDIIHALAVSGHGEYIDEII 401
G S N Y +IH L E +E+I
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI 464
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 83/192 (43%), Gaps = 6/192 (3%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+L+ + + ++ +GI N + + +I + +C++G + + K
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS------HCKEGRVIESEK 497
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M + +N LI G+ A M A +L+ M GL+P+ TY+ L+ GY
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K M+ ++ ++ + + + A+A+ + ++++G +
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617
Query: 266 TYTKLMCGYAKH 277
TY ++ G K+
Sbjct: 618 TYNIILHGLCKN 629
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 150/368 (40%), Gaps = 37/368 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ ++ + +T L K+E +G +PN V Y + +I C+D +
Sbjct: 196 DVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAY------TTIIDSLCKDTLVN 249
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L M D+ P ++ +++G + A + M + P+ T+T L+
Sbjct: 250 DAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILV 309
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K G + + ++ + +++ +++ M A+ +L +M G
Sbjct: 310 DGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCA 369
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
P +Y L+ GY K +D + LL + + D Y ++ L G +
Sbjct: 370 PVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQ----- 424
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
A+ F +C +GL P TY+ L+ G KHG +D +LL S +
Sbjct: 425 EALNLFKEMC----------SSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIE 474
Query: 379 GD---YLDIIHALAVSGHGEYIDEIISK-----IQPGV-GYSADAANHIYHLINKGQIDA 429
D Y +I + ++G E E+ SK IQP + Y+ I L+ +G D
Sbjct: 475 PDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTI----MIKGLLKEGLSDE 530
Query: 430 AYRIVNTL 437
AY + +
Sbjct: 531 AYELFRKM 538
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 125/305 (40%), Gaps = 42/305 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P D+ Y+ +L + H T ++ + + PN VT+ + L+ C++G
Sbjct: 263 IPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTF------TILVDGLCKEG 316
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A + E M K + +NAL+ G+ N M A+ +L +M G P +Y
Sbjct: 317 MVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYN 376
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM---------ASAE 249
L+ GY K +D K+ + + + +LT + S+ M A
Sbjct: 377 ILINGYCKRRRLDEAKSLLVEMSEK---------ELTPDTVTYSTLMQGLCQVGRPQEAL 427
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
+ M +GL P TY+ L+ G KHG +D +LL S + D Y +I +
Sbjct: 428 NLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGM 487
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
++G E E+ + + G++P+ +TYT ++ G K G D
Sbjct: 488 FIAGKLEVAKELFS---------------KLFADGIQPTIRTYTIMIKGLLKEGLSDEAY 532
Query: 367 RLLAQ 371
L +
Sbjct: 533 ELFRK 537
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 30/320 (9%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
++ V D+ Y AL++ + + ++ G+ PN V + + LI +C
Sbjct: 248 DVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVF------TTLIDAHC 301
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
++GN+ + + MR + +NAL+ G +A ++ +AE I+ M AGL+P
Sbjct: 302 KEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKV 361
Query: 196 TYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
TYT L+ G K G +D IK K+ + K S + ++ ++ L + AE +L
Sbjct: 362 TYTTLIDGCCKDGKLDMAMDIKQKM-AEKEVSLDEVTYTALISGL--SKAGRPVDAERVL 418
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVS 309
M +A LEP TYT ++ + + GD+ + +LL + G Y I++ L
Sbjct: 419 REMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKL 478
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G + D + H M G+ P TY L+ G KHG + + L
Sbjct: 479 GQMKNAD----------MLLHA-----MLNIGVSPDDITYNILLDGQCKHGKVANSEELE 523
Query: 370 AQNGSSLVNGDYLDIIHALA 389
+ G Y +I LA
Sbjct: 524 SSKGMVPDFAVYTSLISELA 543
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 125/289 (43%), Gaps = 25/289 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N L+R ++ S ++ + ++P VT+ LIS C+ +++
Sbjct: 189 FNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISG------MCRARDLDAVDG 241
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M D + ALI G + M +A + M G+ P+A +T L+ +
Sbjct: 242 LYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHC 301
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G++++ ++ + + ++ + + ++ +AE I+ M AGL+P
Sbjct: 302 KEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKV 361
Query: 266 TYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TYT L+ G K G +D +++ +A+ SL Y +I L+ +G + V
Sbjct: 362 TYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLR-- 419
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M +A LEP TYT ++ + + GD+ + +LL +
Sbjct: 420 -------------EMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKE 455
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 36/297 (12%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+FL+++ ++GI PN VTY S ++ +C G AT + + M ++ FN
Sbjct: 138 EFLSEMVNRGISPNVVTY------SSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFN 191
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
L+ G S+ + A+ + M + G+EP+ TY LM GY MD + + +
Sbjct: 192 ILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRK 251
Query: 224 SELFLCF-SFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
C S + N+LI S + A+G+L MS L P TY+ LM G+ + G
Sbjct: 252 G----CAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGR 307
Query: 280 MDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM 336
++LL + S + D Y ++ L GH +DE F L+
Sbjct: 308 PQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGH---LDEA----------FELLKA-- 352
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDII-HALAVSG 392
M ++ +EP+ YT L+ G G +++ R L + + V G D++ + + +SG
Sbjct: 353 MQESKIEPNIFIYTILIQGMCNFGKLEAARELFS---NLFVKGIQPDVVTYTVMISG 406
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 118/265 (44%), Gaps = 28/265 (10%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+EPN TY L+ YC ++ A K+ M K S +N LI GH +
Sbjct: 216 KGVEPNVNTYNALMDG------YCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCK 269
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL--FLC 229
+ + A+G+L MS L P TY+ LM G+ + G + + ++ L +
Sbjct: 270 SGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMT 329
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+S L L + A +L M ++ +EP+ YT L+ G G +++ R L +
Sbjct: 330 YSIVLDGLC--KQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFS- 386
Query: 290 SGSSLVNGDYLDII-HALAVSG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
+ V G D++ + + +SG G +E + F ++ H G P++
Sbjct: 387 --NLFVKGIQPDVVTYTVMISGLLKGGLSNEACEL--FRDMAVH----------GCLPNS 432
Query: 347 QTYTKLMCGYAKHGDMDSIRRLLAQ 371
TY ++ G+ ++GD + RL+ +
Sbjct: 433 CTYNVIIQGFLRNGDTSNAGRLIEE 457
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 152/383 (39%), Gaps = 58/383 (15%)
Query: 95 DNEHTFSPTDFLAKLESQGIEPNRVTYQQL-----------------------------I 125
+++H L + G++PN VT+ L I
Sbjct: 24 NHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVI 83
Query: 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM 185
+ S +I+ C+ G+ A ++L+ M +K + V++ +I + + A L+ M
Sbjct: 84 TYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEM 143
Query: 186 SQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM 245
G+ P+ TY+ ++ G+ G + + + ++ + +F + + +
Sbjct: 144 VNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMI 203
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDI 302
A+ + M + G+EP+ TY LM GY MD ++L + + G + Y +
Sbjct: 204 LEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNIL 263
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
I SG IDE ++ MS L P TY+ LM G+ + G
Sbjct: 264 IKGHCKSGR---IDEAKGLL------------AEMSHKALTPDTVTYSTLMKGFCQDGRP 308
Query: 363 DSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEII-----SKIQPGVGYSADA 414
++LL + S + D Y ++ L GH + E++ SKI+P +
Sbjct: 309 QDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTIL 368
Query: 415 ANHIYHLINKGQIDAAYRIVNTL 437
I + N G+++AA + + L
Sbjct: 369 ---IQGMCNFGKLEAARELFSNL 388
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 97/209 (46%), Gaps = 10/209 (4%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ YN L++ + + LA++ + + P+ VTY S L+ +CQDG +
Sbjct: 257 VRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTY------STLMKGFCQDGRPQD 310
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A K+LE MR ++ ++ G + + A +L M ++ +EP+ YT L+
Sbjct: 311 AQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQ 370
Query: 203 GYAKHGDMDSIKTKIPSL--KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
G G +++ + +L K + ++ ++ LL S+ A + M+ G
Sbjct: 371 GMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACE--LFRDMAVHGC 428
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P++ TY ++ G+ ++GD + RL+ +
Sbjct: 429 LPNSCTYNVIIQGFLRNGDTSNAGRLIEE 457
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 86.3 bits (212), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 136/298 (45%), Gaps = 30/298 (10%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFL-AKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
P D+ +N L+ L EH + L ++ +G+ P V++ LI+ YC+ G
Sbjct: 222 PPDVCKFNVLMH-RLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLING------YCKSG 274
Query: 139 NIEGATKILEF-MRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
N++ ++ F M ++ FP ++ LI G + + A + M GL P+ T+
Sbjct: 275 NLDQGFRLKRFMMENRVFP-DVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTF 333
Query: 198 TKLMCGYAKHGDMD-SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
T L+ G+ G D ++ L+ + + L N L V D+ A+ ++ M+
Sbjct: 334 TTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKV-GDLREAKKLVIEMT 392
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
Q GL+P TYT L+ G K GD++S +R+ + + G L N + +I G+
Sbjct: 393 QRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFC--REGQ 450
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
I+ + M +AG++P TYT ++ G+ K GD+ + +LL +
Sbjct: 451 VIEAERTL-------------REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 130/313 (41%), Gaps = 27/313 (8%)
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A E + D +P FN L++ + + + A+ + + + GL P+ ++ L+
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFL-CFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K G++D ++ ++ +F F++ + + + A + M GL
Sbjct: 269 GYCKSGNLDQ-GFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLV 327
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
P+ T+T L+ G+ G D + Q V D Y +I+ L G + E
Sbjct: 328 PNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGD---LREA 384
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSS 375
+V +E M+Q GL+P TYT L+ G K GD++S IR+ + + G
Sbjct: 385 KKLV---------IE---MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIE 432
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYR 432
L N + +I G + + ++ G D A + I+ KG + ++
Sbjct: 433 LDNVAFTALISGFCREGQVIEAERTLREMLEA-GIKPDDATYTMVIHGFCKKGDVKTGFK 491
Query: 433 IVNTLARSANING 445
++ + ++ G
Sbjct: 492 LLKEMQCDGHVPG 504
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 6/190 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ + ++ +G++P++ TY LI C++G++E
Sbjct: 364 DVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC------CKEGDLE 417
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M + + F ALI G + + AE L M +AG++P TYT ++
Sbjct: 418 SALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVI 477
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K GD+ + + ++ + ++ + + M +A +L M G+
Sbjct: 478 HGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVV 537
Query: 262 PSAQTYTKLM 271
P TY L+
Sbjct: 538 PDDITYNILL 547
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 136/298 (45%), Gaps = 30/298 (10%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFL-AKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
P D+ +N L+ L EH + L ++ +G+ P V++ LI+ YC+ G
Sbjct: 222 PPDVCKFNVLMH-RLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLING------YCKSG 274
Query: 139 NIEGATKILEF-MRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
N++ ++ F M ++ FP ++ LI G + + A + M GL P+ T+
Sbjct: 275 NLDQGFRLKRFMMENRVFP-DVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTF 333
Query: 198 TKLMCGYAKHGDMD-SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
T L+ G+ G D ++ L+ + + L N L V D+ A+ ++ M+
Sbjct: 334 TTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKV-GDLREAKKLVIEMT 392
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
Q GL+P TYT L+ G K GD++S +R+ + + G L N + +I G+
Sbjct: 393 QRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFC--REGQ 450
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
I+ + M +AG++P TYT ++ G+ K GD+ + +LL +
Sbjct: 451 VIEAERTL-------------REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKE 495
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 6/225 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ + ++ +G++P++ TY LI C++G++E
Sbjct: 364 DVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGC------CKEGDLE 417
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M + + F ALI G + + AE L M +AG++P TYT ++
Sbjct: 418 SALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVI 477
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K GD+ + + ++ + ++ + + M +A +L M G+
Sbjct: 478 HGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVV 537
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
P TY L+ G+ KHG+ + +L ++ G G Y +I L
Sbjct: 538 PDDITYNILLEGHCKHGNREDFDKLQSEKGLVQDYGSYTSLIGDL 582
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 130/313 (41%), Gaps = 27/313 (8%)
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A E + D +P FN L++ + + + A+ + + + GL P+ ++ L+
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFL-CFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K G++D ++ ++ +F F++ + + + A + M GL
Sbjct: 269 GYCKSGNLDQ-GFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLV 327
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
P+ T+T L+ G+ G D + Q V D Y +I+ L G + E
Sbjct: 328 PNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGD---LREA 384
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSS 375
+V +E M+Q GL+P TYT L+ G K GD++S IR+ + + G
Sbjct: 385 KKLV---------IE---MTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIE 432
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYR 432
L N + +I G + + ++ G D A + I+ KG + ++
Sbjct: 433 LDNVAFTALISGFCREGQVIEAERTLREMLEA-GIKPDDATYTMVIHGFCKKGDVKTGFK 491
Query: 433 IVNTLARSANING 445
++ + ++ G
Sbjct: 492 LLKEMQCDGHVPG 504
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ LD + AL+ + L ++ GI+P+ TY +I +C+ G
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHG------FCKKG 484
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+++ K+L+ M+ +N L+ G + M +A +L M G+ P TY
Sbjct: 485 DVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYN 544
Query: 199 KLMCGYAKHG---DMDSIKTK 216
L+ G+ KHG D D ++++
Sbjct: 545 ILLEGHCKHGNREDFDKLQSE 565
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 129/545 (23%), Positives = 216/545 (39%), Gaps = 85/545 (15%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
GN+ V G ++ YNAL+ E + S + N VTY
Sbjct: 337 GNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTY 396
Query: 122 QQLISNSKLISKYCQDGNIEGATK-----ILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
S LI +C+ G ++ A I + +R+ +P +N+LI GH + D++
Sbjct: 397 ------SILIDSFCKRGMLDVAESYFGRMIEDGIRETIYP-----YNSLINGHCKFGDLS 445
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236
+AE + T M GLEP+A T+T L+ GY K ++ + + ++F
Sbjct: 446 AAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALI 505
Query: 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN 296
+ +++MA A + M + ++P+ TY ++ GY K +MD LL L N
Sbjct: 506 YGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLED---MLHN 562
Query: 297 G------DYLDIIHALA----VSGHGEYIDEVSAIVCFVN-ICFHWL------EGPM--- 336
G Y +I L VS ++ID++ +N +C+ L +G +
Sbjct: 563 GLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEA 622
Query: 337 ------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHA 387
M Q G+ + L+ G K DM + LL + + D Y +I A
Sbjct: 623 LSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDA 682
Query: 388 LAVSG----HGEYIDEIIS-KIQPG-VGYSADAANHIYHLINKGQIDAAYRIVNTLARSA 441
+ G GE +D +++ K P V Y+A + L G+ID A + + +A
Sbjct: 683 YSKEGSFKKSGECLDLMVTEKCFPNVVTYTA----FMNGLCKVGEIDRAGHLFEKML-TA 737
Query: 442 NINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANI 501
NI+ + G FL + N A ++H + KG LA +A
Sbjct: 738 NISPNSVTYGCFLDSLTKEGNMK-------EATDLHHEMLKG----------LLANTATY 780
Query: 502 NGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGA 561
N L+R K + I+ V +T+ + P + +I H D A
Sbjct: 781 N--------ILIRGFCKLGRLIEAT-KVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAA 831
Query: 562 VETFE 566
VE ++
Sbjct: 832 VELWD 836
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 10/127 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+R + T L+++ GI P+ +TY S +I ++C+ G++ A +
Sbjct: 780 YNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITY------STIIYEHCRSGDVGAAVE 833
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA----QTYTKLM 201
+ + M K FN LIYG + A + M GL+P Q +
Sbjct: 834 LWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGV 893
Query: 202 CGYAKHG 208
C + HG
Sbjct: 894 CNFLMHG 900
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL-EFMRDKTFPISEGVFNALIYGHS 170
+G+ N TY LI +C+ G + ATK+L E + FP ++ +IY H
Sbjct: 771 KGLLANTATYNILIRG------FCKLGRLIEATKVLSEMTENGIFPDCI-TYSTIIYEHC 823
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 211
++ D+ +A + M + G+EP + + L+ G +G +D
Sbjct: 824 RSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALD 864
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 110/287 (38%), Gaps = 59/287 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ + N L + G+ P+ V Y + +IS +C+ GN+ A K
Sbjct: 315 YNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVY------TTVISGFCKLGNVSAACK 368
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + MR K + ++I+G ++ M A + M GLEP TYT L+ GY
Sbjct: 369 LFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYC 428
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G+M +F + N M Q GL P+
Sbjct: 429 KAGEMKE------------------AFSVHN-----------------QMVQKGLTPNVV 453
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIV 322
TYT L G K+G++D LL + + + Y I++ L G+ E ++
Sbjct: 454 TYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLME-- 511
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
M AG P TYT LM Y K G+M LL
Sbjct: 512 -------------EMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELL 545
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 106/240 (44%), Gaps = 18/240 (7%)
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C+ G ++ K+++ ++ K E ++N +I + ++ AE +L M + G+ P
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
YT ++ G+ K G++ + ++ + + ++ I S M A +
Sbjct: 348 VVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
M GLEP TYT L+ GY K G+M SV + Q G + Y + L +G
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGE 467
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ +E+ H MS+ GL+P+ TY ++ G K G+++ +L+ +
Sbjct: 468 IDVANEL----------LH-----EMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEE 512
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 104/264 (39%), Gaps = 18/264 (6%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++ +G+ PN VTY + L C++G I+ A ++L M K + +N ++
Sbjct: 442 QMVQKGLTPNVVTY------TALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVN 495
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G + ++ ++ M AG P TYT LM Y K G+M + + +
Sbjct: 496 GLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQP 555
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+F + +S + E ++ M + G+ P+A T+ LM Y +M + +
Sbjct: 556 TLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIY 615
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
V D + + + GH + + A W M + G +A
Sbjct: 616 KAMHDRGVMPD--SNTYNILIKGHCKARNMKEA----------WFLHKEMVEKGYSVTAA 663
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TY L+ G+ K R+L +
Sbjct: 664 TYDALIRGFYKRKKFVEARKLFEE 687
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 128/319 (40%), Gaps = 39/319 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI Y +++ + + ++ +G+EP+ VTY + LI YC+ G ++
Sbjct: 381 DIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTY------TALIDGYCKAGEMK 434
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M K + + AL G + ++ A +L MS+ GL+P+ TY ++
Sbjct: 435 EAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIV 494
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSEL----FLCFSFQLTNLL--ILVSSDMASAEGILTMM 255
G K G+++ ++K E+ F + T L+ +MA A +L +M
Sbjct: 495 NGLCKIGNIEQ------TVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIM 548
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHG 312
L+P+ T+ LM G+ G ++ RL+ + G + ++ + +
Sbjct: 549 LNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNM 608
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLL 369
E+ M G+ P + TY L+ G+ K +M + + +
Sbjct: 609 RATTEIYK---------------AMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM 653
Query: 370 AQNGSSLVNGDYLDIIHAL 388
+ G S+ Y +I
Sbjct: 654 VEKGYSVTAATYDALIRGF 672
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 98/243 (40%), Gaps = 33/243 (13%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
+ +++ G P+ +TY + L+ YC+ G + A ++L M +K + FN L
Sbjct: 510 MEEMDLAGFYPDTITY------TTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVL 563
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK---- 221
+ G + + E ++ M + G+ P+A T+ LM Y +M + ++
Sbjct: 564 MNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGV 623
Query: 222 -PQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
P S + N+LI + +M A + M + G +A TY L+ G+ K
Sbjct: 624 MPDSNTY--------NILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKR 675
Query: 278 GDMDSVRRLLAQSGSS--LVNGDYLDII---------HALAVSGHGEYIDEVSAIVCFVN 326
R+L + + D DI + + E++ E+S + V
Sbjct: 676 KKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTELSGTIFVVY 735
Query: 327 ICF 329
ICF
Sbjct: 736 ICF 738
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 126/292 (43%), Gaps = 57/292 (19%)
Query: 67 EDPFSV--HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL 124
E+ FS+ G+L + ++ YNAL+ NE ++ +G+EPN VTY
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY--- 376
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
+ LI C+ G IE A + + MRDK ++ +N+LI G+ + + A G+L+
Sbjct: 377 ---AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSG 433
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
M + GL P+A +Y+ L+ G ++G D
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNG-----------------------------------D 458
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
++SA + M++ G+ + T+T L+ G+ K MD RL + S V + ++
Sbjct: 459 LSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN--EVTF 516
Query: 305 ALAVSGHGEYIDEVSAIVCFV-NICFHWLEGPMMSQAGLEPSAQTYTKLMCG 355
+ + G+ C V NI + M + GL+P TY L+ G
Sbjct: 517 NVMIEGY-----------CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 128/317 (40%), Gaps = 27/317 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V LD Y A +R Y ++ + + ++ES+G++ + V Y L+ C++
Sbjct: 194 VHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYG------LCKNM 247
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A ++ M + E + L+YG + ++ A I M + G PS +
Sbjct: 248 RVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCS 307
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
++ K ++ + L + F++ + + A+ + M+
Sbjct: 308 FMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGR 367
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
GLEP+ TY L+ K G ++ L + G + Y +I+ G +
Sbjct: 368 GLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS---L 424
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQN 372
D + L G M + GL P+A +Y+ L+ G ++GD+ S + R +A+
Sbjct: 425 DRARGL----------LSG--MVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAER 472
Query: 373 GSSLVNGDYLDIIHALA 389
G + N + +I+
Sbjct: 473 GIAWNNYTFTALINGFC 489
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 90/263 (34%), Gaps = 88/263 (33%)
Query: 107 AKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
KL G+ PN Y + LI K C++ + A ++ + M + +E + LI
Sbjct: 327 CKLGDLGMVPNVFAY------NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILI 380
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL 226
+ + + A + M G++ + Y L+ GY K G +D
Sbjct: 381 HALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDR-------------- 426
Query: 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
A G+L+ M + GL P+A +Y+ L+ G ++GD+ S L
Sbjct: 427 ---------------------ARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMEL 465
Query: 287 LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
H E M++ G+ +
Sbjct: 466 ------------------------HRE-----------------------MAERGIAWNN 478
Query: 347 QTYTKLMCGYAKHGDMDSIRRLL 369
T+T L+ G+ K MD RL
Sbjct: 479 YTFTALINGFCKDKKMDEAARLF 501
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 113/298 (37%), Gaps = 33/298 (11%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D K+ G+ + Y + I YC+ N++GA ++ M + S +N
Sbjct: 184 DLFDKMLQSGVHLDEYVY------TAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYN 237
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
L+YG + + A + +M G+ TY L+ G+ + M+ ++ +
Sbjct: 238 VLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR---MEELEMALRITHDM 294
Query: 224 SELFLCFSFQLTNLLI--LVSSDMA-SAEGILTMMSQAGLEPSAQTYTKL---MCGYAKH 277
L S + +I L ++ A + + G+ P+ Y L +C +
Sbjct: 295 IRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERF 354
Query: 278 GDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
D D + + +A G Y +IHAL G + +C + M
Sbjct: 355 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM------IEDALCLFD---------KM 399
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSSLVNGDYLDIIHALAVSG 392
G++ + Y L+ GY K G +D R LL+ + G + Y +I L +G
Sbjct: 400 RDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 115/294 (39%), Gaps = 29/294 (9%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V LD+ + ++ L +++ QG++P+ + Y + +I ++
Sbjct: 614 VKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY------TCMIDALSKEE 667
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A + M + + LI ++ + SAE + M + P+ TY
Sbjct: 668 NMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYN 727
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
+ +A GDM+ K + S Q L SF + + + + A ++ ++++
Sbjct: 728 CFLDYFATEGDMEKAK-DLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITES 786
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI----IHALAVSGHGEY 314
G P +Y+ ++ K GD++ L + L G D+ I + HGE
Sbjct: 787 GFSPDCISYSTIIHELCKMGDINKAFELWNE---MLYKGLKPDVVAYNIFIRWCNVHGE- 842
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA--KHGDMDSIR 366
A+ + N M ++G++P+ TY L+ G + H D R
Sbjct: 843 --SDKALGIYTN----------MIRSGVQPNWDTYRALLSGISLMLHYDFSCFR 884
Score = 41.2 bits (95), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 138/362 (38%), Gaps = 34/362 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ AL+ + ++ K+ + PN VT+ +I YC GNI A +
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG------YCLVGNIRKAFQ 534
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + + +LI G + ++ A + + + + + T L+ G
Sbjct: 535 LYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLF 594
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G + + SF + L D + + M + G++P
Sbjct: 595 REGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI 654
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
YT ++ +K +M Q G S + +I+ L SG Y+
Sbjct: 655 FYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSG---YLGSAEL-- 709
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL----LAQNGSSLVN 378
+C L G ++ P+ TY + +A GDM+ + L L + +S+V+
Sbjct: 710 ----LCKEMLAGNVL------PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVS 759
Query: 379 GDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVN 435
+ L I L +G + +++ KI G+S D ++ I+ L G I+ A+ + N
Sbjct: 760 FNIL--IKGLCKAGKIQEAIDLMRKITES-GFSPDCISYSTIIHELCKMGDINKAFELWN 816
Query: 436 TL 437
+
Sbjct: 817 EM 818
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 160/392 (40%), Gaps = 43/392 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D YN +L L D L ++S+G+ PN+ TY L+ YC+ G
Sbjct: 245 VP-DTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCG------YCRLG 297
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ ATK++E M + +N L+ G + A I M + + P TY
Sbjct: 298 LLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYN 357
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G ++ D + + I + + ++ + + +M A L M +
Sbjct: 358 TLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEEN 417
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL---DIIHALAV------- 308
GL P TY L+ Y K G M R++ + S + D I+H L V
Sbjct: 418 GLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEA 477
Query: 309 -------SGHGEYIDEVSAIVCFVNICFHWLEGPM-------MSQAGLEPSAQTYTKLMC 354
S G +DEVS + + F +G M + + PS TY ++
Sbjct: 478 YNLLCSASKRGYILDEVSYGILILGY-FKDEKGDRALNLWDEMKERQIMPSTITYNSVIG 536
Query: 355 GYAKHGDMD-SIRRL--LAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISKI-QP 406
G + +D +I +L + +NG Y IIH + G+ E + +E+I + +P
Sbjct: 537 GLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKP 596
Query: 407 GVGYSADAANHIYHLINKGQIDAAYRIVNTLA 438
V Y+ + + L +G ++ A ++ NTL
Sbjct: 597 DV-YTCNIL--LRGLCREGMLEKALKLFNTLV 625
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 129/330 (39%), Gaps = 41/330 (12%)
Query: 92 VYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMR 151
V +D H T K++ PN +T L+++ + +Y +I A ++L+
Sbjct: 151 VQMDQPHL--ATQIFNKMKRLNYRPNLLTCNTLMNS---LVRYPSSSSILLARQVLKDSI 205
Query: 152 DKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 211
+ FN LIYG+ + + A + MS+ G P +Y ++ K +
Sbjct: 206 KLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQ 265
Query: 212 SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA---SAEGILTMMSQAGLEPSAQTYT 268
+ + +K + L + N+L+ + A ++ +M++ L P+ TY
Sbjct: 266 EARDLLLDMKSKG---LSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYN 322
Query: 269 KLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID--EVSAIV---- 322
L+ G+ G +D R+ + V D + + + G ++ D EV +++
Sbjct: 323 MLVNGFCNDGKIDEAFRIRDEMEKMNVLPDV--VTYNTLIDGCSQWRDSSEVYSLIEEMD 380
Query: 323 --------CFVNICFHWL--EGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMD 363
NI W+ +G M M + GL P TY L+ Y K G M
Sbjct: 381 KKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMG 440
Query: 364 SIRRLLAQNGSSLVNGDYL---DIIHALAV 390
R++ + S + D I+H L V
Sbjct: 441 KAFRMMDEMTSKGLKIDTWTLNTILHCLCV 470
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 109/269 (40%), Gaps = 59/269 (21%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L ++ +G+ P+ V Y + LI +C+ GN + A K+ M + F+AL
Sbjct: 203 LREMMKRGVFPDHVIY------TTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSAL 256
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I G S + + A+ + M + G EP TYT L+ GY K G+M
Sbjct: 257 ICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKK------------- 303
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
+F L N M Q GL P+ TYT L G K G++D+
Sbjct: 304 -----AFFLHN-----------------QMVQIGLTPNVVTYTALADGLCKSGELDTANE 341
Query: 286 LL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
LL + G L Y I++ L +G+ + V + M +AGL
Sbjct: 342 LLHEMCRKGLQLNISTYNTIVNGLCKAGN--ILQAVKLM-------------EEMKEAGL 386
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
P TYT LM Y K G+M R LL +
Sbjct: 387 HPDTITYTTLMDAYYKTGEMVKARELLRE 415
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 117/280 (41%), Gaps = 24/280 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ + +T + +++E++ I P+ + + S LI G + A K
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAF------SALICGLSGSGKVVEADK 271
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M K F E + ALI G+ + +M A + M Q GL P+ TYT L G
Sbjct: 272 LFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLC 331
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G++D+ + + + ++ + + ++ A ++ M +AGL P
Sbjct: 332 KSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTI 391
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TYT LM Y K G+M R LL + G + +++ L +SG E + +
Sbjct: 392 TYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERL---- 447
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
W M + G+ P+A TY +M Y +M
Sbjct: 448 ------LKW-----MLEKGIMPNAATYNSIMKQYCIRNNM 476
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 114/295 (38%), Gaps = 49/295 (16%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTK 216
+N L+ + + A +L M G P +YT ++ GY G++ + + +
Sbjct: 113 YNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQ 172
Query: 217 IPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
+ LKP +++ LL+ S + E +L M + G+ P YT L+ G+ K
Sbjct: 173 LKGLKPN-----LYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCK 227
Query: 277 HGDMDSVRRLLAQSGSSLVNGDYLDIIHALA-VSGHGEYIDEVSAIVCFVNICFHWLEGP 335
G+ + +L ++ + + D + + +SG G+ ++
Sbjct: 228 LGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLF-------------N 274
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSG 392
M + G EP TYT L+ GY K G+M + + Q G + Y + L SG
Sbjct: 275 EMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSG 334
Query: 393 HGEYIDEIISKIQPGVGYSADAANHIYH-LINKG---QIDAAYRIVNTLARSANI 443
D AN + H + KG I IVN L ++ NI
Sbjct: 335 E------------------LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNI 371
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ L+IS YN ++ + + +++ G+ P+ +TY + L+ Y + G
Sbjct: 351 LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITY------TTLMDAYYKTG 404
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A ++L M D+ + FN L+ G + + E +L M + G+ P+A TY
Sbjct: 405 EMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYN 464
Query: 199 KLMCGYAKHGDMDSIKTKI------PSLKPQSELFLCFSFQLTNLLI---LVSSDMASAE 249
+M Y +M I T+I + P S + N+LI + +M A
Sbjct: 465 SIMKQYCIRNNM-RISTEIYRGMCAQGVVPDSNTY--------NILIKGHCKARNMKEAW 515
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ M + +A +Y L+ G+ K + R+L +
Sbjct: 516 FLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEE 555
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN++++ Y + T+ + +QG+ P+ TY LI +C+ N++ A
Sbjct: 463 YNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKG------HCKARNMKEAWF 516
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M +K F ++ +NALI G + + A + M + GL SA+ Y +
Sbjct: 517 LHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNY 576
Query: 206 KHGDMDS 212
+ G+M++
Sbjct: 577 EEGNMET 583
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 149/371 (40%), Gaps = 43/371 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y ++ +T D K+E G +PN VTY S +I C+D +
Sbjct: 197 NVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTY------STIIDSLCKDRLVN 250
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + L M ++ P + +N++++G + A + M + P+ T+T L+
Sbjct: 251 DAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILV 310
Query: 202 CGYAKHGDMDSIKTKI---------PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
G K G + + P + + L + Q M A+ +
Sbjct: 311 DGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRL---------MNEAKKVF 361
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
+M + G P A +Y L+ GY K MD + LLA+ +N D + ++ + G
Sbjct: 362 EIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPD--TVTYSTLMQGLC 419
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
+ A+ F +C + GP P+ TY L+ G+ KHG +D +LL
Sbjct: 420 QLGRPKEALNLFKEMCSY---GP-------HPNLVTYVILLDGFCKHGHLDEALKLLKSM 469
Query: 373 GSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQ 426
+ + Y +I + ++G E E+ SK+ G G D + I L+ +G
Sbjct: 470 KEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLF-GDGTRPDIRTYTVMIKGLLKEGL 528
Query: 427 IDAAYRIVNTL 437
D AY + +
Sbjct: 529 SDEAYDLFRKM 539
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 34/296 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E +P ++ YN+++ + + T ++ + + PN VT+ + L+ C
Sbjct: 261 ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTF------TILVDGLC 314
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
++G + A + E M +K +NAL+ G+ M A+ + +M + G P A
Sbjct: 315 KEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAH 374
Query: 196 TYTKLMCGYAKHGDMDSIKTKI-----PSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
+Y L+ GY K MD K+ + +L P + + +S + L L A
Sbjct: 375 SYNILINGYCKSRRMDEAKSLLAEMYHKALNPDT---VTYSTLMQGLCQL--GRPKEALN 429
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALA 307
+ M G P+ TY L+ G+ KHG +D +LL + + Y +I +
Sbjct: 430 LFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMF 489
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
++G E E+ F L G G P +TYT ++ G K G D
Sbjct: 490 IAGKLEVAKEL----------FSKLFGD-----GTRPDIRTYTVMIKGLLKEGLSD 530
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 108/261 (41%), Gaps = 31/261 (11%)
Query: 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS 177
RVT+ + S + LI+ C+ +++ + +L M FNALI G +
Sbjct: 123 RVTHN-VYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKE 181
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSF 232
A + M + G EP+ +YT ++ G K G+ K + KP + +S
Sbjct: 182 AVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPN---VVTYST 238
Query: 233 QLTNLLI--LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
+ +L LV+ M L+ M + G+ P+ TY ++ G+ G ++ RL +
Sbjct: 239 IIDSLCKDRLVNDAME----FLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKE- 293
Query: 291 GSSLVNGDYL--DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
+V D + + + V G + +V + F M++ G+EP T
Sbjct: 294 ---MVGRDVMPNTVTFTILVDGLCK-----EGMVSEARLVFET-----MTEKGVEPDIST 340
Query: 349 YTKLMCGYAKHGDMDSIRRLL 369
Y LM GY M+ +++
Sbjct: 341 YNALMDGYCLQRLMNEAKKVF 361
>gi|224135699|ref|XP_002322139.1| predicted protein [Populus trichocarpa]
gi|222869135|gb|EEF06266.1| predicted protein [Populus trichocarpa]
Length = 866
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 126/306 (41%), Gaps = 22/306 (7%)
Query: 66 CEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI 125
C D F G V + Y AL+ Y N + L +++ + + P+ +TY +I
Sbjct: 162 CSDIFE-EMGAHGVSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVI 220
Query: 126 SNSKLISKYCQDGNI--EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
++ C G + EG + MR + +N L+ S AE +
Sbjct: 221 NS-------CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFR 273
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
M++ G+ P TYT L+ + K +D + + + + S+ +
Sbjct: 274 TMNEGGVVPDITTYTYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIG 333
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII 303
++ A G+ +M +AG P+A+TY+ L+ Y KHG D VR L + S D
Sbjct: 334 NIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYN 393
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+ V G G Y EV + FH M++ +EP+ +TY L+ K G D
Sbjct: 394 TLIDVFGEGGYFKEVVTL-------FH-----DMAEENVEPNMETYEGLIFACGKGGLHD 441
Query: 364 SIRRLL 369
+++L
Sbjct: 442 DAKKIL 447
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 136/353 (38%), Gaps = 81/353 (22%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
+D ++ + G+ + + S + LI+ Y ++G E + ++LE M+ + S +
Sbjct: 163 SDIFEEMGAHGVS------RSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTY 216
Query: 163 NALIYGHSQAN-DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
N +I ++ D G+ M G++P TY L+C + G D
Sbjct: 217 NTVINSCARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDE--------- 267
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
AE + M++ G+ P TYT L+ + K +D
Sbjct: 268 --------------------------AEMVFRTMNEGGVVPDITTYTYLVDTFGKLNRLD 301
Query: 282 SVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
V LL A +G+ Y ++ A A G+ I++ + + +M
Sbjct: 302 KVSELLKEMASTGNVPEISSYNVLLEAYARIGN---IEDATGVF------------RLMQ 346
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYID 398
+AG P+A+TY+ L+ Y KHG D +R L + S D + V G G Y
Sbjct: 347 EAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGYFK 406
Query: 399 EIIS--------KIQPGV-------------GYSADAANHIYHLINKGQIDAA 430
E+++ ++P + G DA + H+ KG I ++
Sbjct: 407 EVVTLFHDMAEENVEPNMETYEGLIFACGKGGLHDDAKKILLHMSEKGMIPSS 459
Score = 40.0 bits (92), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 121/326 (37%), Gaps = 48/326 (14%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL------------- 124
+VP +IS YN LL Y + T ++ G PN TY L
Sbjct: 315 NVP-EISSYNVLLEAYARIGNIEDATGVFRLMQEAGCVPNAETYSILLGLYGKHGRYDEV 373
Query: 125 --------ISNSK--------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+SN++ LI + + G + + M ++ + + LI+
Sbjct: 374 RELFLEMKVSNTEPDAATYNTLIDVFGEGGYFKEVVTLFHDMAEENVEPNMETYEGLIFA 433
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
+ A+ IL MS+ G+ PS++ YT ++ Y G + + +L +E+
Sbjct: 434 CGKGGLHDDAKKILLHMSEKGMIPSSKAYTGVIEAY---GQAAMYEEALVTLNTMNEMGS 490
Query: 229 CFSFQLTNLLILVSSD---MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
+ + N LI + + E IL M G+ ++ ++ G+ + G + +
Sbjct: 491 KPTIETYNTLIYMFARGGLYKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIK 550
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ S + D + L+V +DE ++ F I +G+ P+
Sbjct: 551 AYVEMEKSRLVPDERTLEAVLSVYCIAGLVDE--SVEQFQEI----------KASGILPN 598
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQ 371
Y ++ YAK + LL +
Sbjct: 599 VMCYCMMLAVYAKSDRWNEAYELLDE 624
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 57/292 (19%)
Query: 67 EDPFSV--HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL 124
E+ FS+ G+L + ++ YNAL+ NE ++ +G+EPN VTY
Sbjct: 343 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY--- 399
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
+ LI C+ G IE A + + MRDK ++ +N+LI G+ + + A G+L+
Sbjct: 400 ---AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSG 456
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
M + GL P+A +Y+ L+ G ++GD+ S C
Sbjct: 457 MVKEGLTPTAASYSPLIAGLCRNGDLSS----------------CMELHRE--------- 491
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
M++ G+ + T+T L+ G+ K MD RL + S V + ++
Sbjct: 492 ----------MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN--EVTF 539
Query: 305 ALAVSGHGEYIDEVSAIVCFV-NICFHWLEGPMMSQAGLEPSAQTYTKLMCG 355
+ + G+ C V NI + M + GL+P TY L+ G
Sbjct: 540 NVMIEGY-----------CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 580
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 128/317 (40%), Gaps = 27/317 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V LD Y A +R Y ++ + + ++ES+G++ + V Y L+ C++
Sbjct: 217 VHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYG------LCKNM 270
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A ++ M + E + L+YG + ++ A I M + G PS +
Sbjct: 271 RVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCS 330
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
++ K ++ + L + F++ + + A+ + M+
Sbjct: 331 FMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGR 390
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
GLEP+ TY L+ K G ++ L + G + Y +I+ G +
Sbjct: 391 GLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS---L 447
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQN 372
D + L G M + GL P+A +Y+ L+ G ++GD+ S + R +A+
Sbjct: 448 DRARGL----------LSG--MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAER 495
Query: 373 GSSLVNGDYLDIIHALA 389
G + N + +I+
Sbjct: 496 GIAWNNYTFTALINGFC 512
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 93/273 (34%), Gaps = 91/273 (33%)
Query: 97 EHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFP 156
E FS KL G+ PN Y + LI K C++ + A ++ + M +
Sbjct: 343 EEAFS---LACKLGDLGMVPNVFAY------NALIDKLCKNERFDDADRLFKEMAGRGLE 393
Query: 157 ISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTK 216
+E + LI+ + + A + M G++ + Y L+ GY K G +D
Sbjct: 394 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDR---- 449
Query: 217 IPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
A G+L+ M + GL P+A +Y+ L+ G +
Sbjct: 450 -------------------------------ARGLLSGMVKEGLTPTAASYSPLIAGLCR 478
Query: 277 HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM 336
+GD+ S L H E
Sbjct: 479 NGDLSSCMEL------------------------HRE----------------------- 491
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
M++ G+ + T+T L+ G+ K MD RL
Sbjct: 492 MAERGIAWNNYTFTALINGFCKDKKMDEAARLF 524
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 113/298 (37%), Gaps = 33/298 (11%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D K+ G+ + Y + I YC+ N++GA ++ M + S +N
Sbjct: 207 DLFDKMLQSGVHLDEYVY------TAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYN 260
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
L+YG + + A + +M G+ TY L+ G+ + M+ ++ +
Sbjct: 261 VLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR---MEELEMALRITHDM 317
Query: 224 SELFLCFSFQLTNLLI--LVSSDMA-SAEGILTMMSQAGLEPSAQTYTKL---MCGYAKH 277
L S + +I L ++ A + + G+ P+ Y L +C +
Sbjct: 318 IRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERF 377
Query: 278 GDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
D D + + +A G Y +IHAL G + +C + M
Sbjct: 378 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM------IEDALCLFD---------KM 422
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSSLVNGDYLDIIHALAVSG 392
G++ + Y L+ GY K G +D R LL+ + G + Y +I L +G
Sbjct: 423 RDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 480
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 83/424 (19%), Positives = 158/424 (37%), Gaps = 49/424 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ AL+ + ++ K+ + PN VT+ +I YC GNI A +
Sbjct: 504 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG------YCLVGNIRKAFQ 557
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + + +LI G + ++ A + + + + + T L+ G+
Sbjct: 558 LYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFF 617
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G + + SF + L D + + M + G++P
Sbjct: 618 REGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI 677
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
YT ++ +K +M Q G S + +I+ L SG Y+
Sbjct: 678 FYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSG---YLGSAEL-- 732
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL----LAQNGSSLVN 378
+C L G ++ P+ TY + +A GDM+ + L L + +S+V+
Sbjct: 733 ----LCKEMLAGNVL------PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVS 782
Query: 379 GDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVN 435
+ L I L +G + +++SKI G+S D ++ I+ L G I+ A+ + N
Sbjct: 783 FNIL--IKGLCKAGKIQEAIDLMSKITES-GFSPDCISYSTIIHELCKMGDINKAFELWN 839
Query: 436 TL---------------ARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLI 480
+ R N++GE G + QP + I ++
Sbjct: 840 EMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMV 899
Query: 481 NKGQ 484
+KGQ
Sbjct: 900 SKGQ 903
>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 831
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 136/320 (42%), Gaps = 56/320 (17%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y L+ Y + + ++E++G+ PN TY S +IS Y + G++E
Sbjct: 226 NVHSYTNLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATY------SVIISGYGRLGDVE 279
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + + + ++ ++N +I+ + +A +M AE I+T M + GLE + Y LM
Sbjct: 280 AAERWFQRALSENWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLM 339
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL--------CF------------SFQLTNLL--- 238
GY +D LK ++E L C + Q++N +
Sbjct: 340 DGYVHCRAVDKCLNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQ 399
Query: 239 ----------ILVS-----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+++ D A+A + MS AG++P TY LM + K+G M+
Sbjct: 400 GIKHNRKTYSMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRA 459
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
LLA+ + +GD + + ID I + + F + M AG
Sbjct: 460 LELLAR----MESGDCPPTLRTYTI-----IIDGFMKI-GDLRMAFETVRD--MKMAGFR 507
Query: 344 PSAQTYTKLMCGYAKHGDMD 363
PSA TY +M G A+ G MD
Sbjct: 508 PSAATYNVIMHGLAQAGQMD 527
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 121/286 (42%), Gaps = 46/286 (16%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + N + LA++ES P TY + +I + + G++ A +
Sbjct: 443 YNILMNAFCKNGQMNRALELLARMESGDCPPTLRTY------TIIIDGFMKIGDLRMAFE 496
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M+ F S +N +++G +QA M A I+ M AG+ P+ ++YT L+ GYA
Sbjct: 497 TVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYA 556
Query: 206 KHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
GDM + K LKP + ++ L + M S I M+ AG+
Sbjct: 557 CIGDMGLAFKYFNRIKEVGLKPD---VIAYASLLK--ACCKAGRMQSTLAITAEMAAAGV 611
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
+ Y L+ G+A+ GDM + DI+ + H ++ +
Sbjct: 612 PMNNYIYNILLDGWAQRGDM----------------WEASDIMQKMR---HEGLTPDIHS 652
Query: 321 IVCFVNICFHWLEGPM---------MSQAGLEPSAQTYTKLMCGYA 357
F+N C G M M Q G++P+ Q YT L+ G+A
Sbjct: 653 YTSFINACCK--AGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWA 696
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 150/367 (40%), Gaps = 63/367 (17%)
Query: 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS 177
R+ + ++ L++ Y + G+ A E MR + + LI+ ++ A D+
Sbjct: 186 RIKKPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRG 245
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
A + M G+ P+A TY+ ++ GY + GD+++ + + SE + N+
Sbjct: 246 AIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQ--RALSENWHHNDVIYNNI 303
Query: 238 L--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV----RRLLAQSG 291
+ + +M AE I+T M + GLE + Y LM GY +D RRL A++
Sbjct: 304 IHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTE 363
Query: 292 SSL-------------------------VNGDYLD--IIH-----ALAVSGHGEYIDEVS 319
+ L ++ + D I H ++ + G+ + D +
Sbjct: 364 TGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTAN 423
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG 379
A F + MS AG++P TY LM + K+G M+ LLA+ + +G
Sbjct: 424 AFSVFED----------MSNAGIKPDGITYNILMNAFCKNGQMNRALELLAR----MESG 469
Query: 380 D-------YLDIIHALAVSGHGEYIDEIISKIQ-PGVGYSADAANHIYH-LINKGQIDAA 430
D Y II G E + ++ G SA N I H L GQ+D A
Sbjct: 470 DCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRA 529
Query: 431 YRIVNTL 437
I++ +
Sbjct: 530 ASIIDEM 536
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 34/263 (12%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++E QGI+ NR TY S +I Y Q G+ A + E M + +N L+
Sbjct: 395 EMEDQGIKHNRKTY------SMIIDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMN 448
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM----DSIK-TKIPSLKP 222
+ M A +L M P+ +TYT ++ G+ K GD+ ++++ K+ +P
Sbjct: 449 AFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRP 508
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+ + L + M A I+ M AG+ P+ ++YT L+ GYA GDM
Sbjct: 509 SAATYNVIMHGLAQ-----AGQMDRAASIIDEMVVAGVHPNERSYTTLIEGYACIGDMGL 563
Query: 283 VRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+ + + D Y ++ A +G + ++A M+
Sbjct: 564 AFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITA---------------EMAA 608
Query: 340 AGLEPSAQTYTKLMCGYAKHGDM 362
AG+ + Y L+ G+A+ GDM
Sbjct: 609 AGVPMNNYIYNILLDGWAQRGDM 631
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP++ YN LL + + +D + K+ +G+ P+ +Y + I+ C+ G
Sbjct: 611 VPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSY------TSFINACCKAG 664
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ AT+ +E M+ + + + LI+G + A+ A M AG+ P Y
Sbjct: 665 DMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYH 724
Query: 199 KLM 201
+M
Sbjct: 725 CIM 727
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 103/233 (44%), Gaps = 44/233 (18%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP DI YN L+ Y E ++ +++++ G++PN VTY S LI +C++G
Sbjct: 297 VP-DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTY------STLIDAFCKEG 349
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++GA K+L MR +E + +LI + +A ++ A +L M QAG++ + TYT
Sbjct: 350 MMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYT 409
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G K G M AE + M +
Sbjct: 410 ALLDGLCKAG-----------------------------------RMIEAEEVFRSMLKD 434
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
G+ P+ Q YT L+ GY K M+ ++L Q + D I++ + GH
Sbjct: 435 GISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL--ILYGSIIWGH 485
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 117/299 (39%), Gaps = 40/299 (13%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F + GI P+ TY + +I C++G++E + ++ MR+ +N+
Sbjct: 217 FFNDMIGAGIAPSVFTY------NVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNS 270
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPS 219
LI G+ + + + M G P TY L+ Y K M + K
Sbjct: 271 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 330
Query: 220 LKPQSELFLCFSFQLTNLLILVSSD--MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
LKP + + L+ + M A +L M + GL P+ TYT L+ K
Sbjct: 331 LKPNVVTY-------STLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKA 383
Query: 278 GDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
G++ +LL Q+G L Y ++ L +G +EV
Sbjct: 384 GNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFR-------------- 429
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
M + G+ P+ Q YT L+ GY K M+ ++L Q + D I++ + GH
Sbjct: 430 -SMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL--ILYGSIIWGH 485
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 107/274 (39%), Gaps = 41/274 (14%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ + + GN + K M S +N +I + D+ ++ + M + G
Sbjct: 201 LLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMG 260
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKT---------KIPSLKPQSELFLCF-SFQLTNLLI 239
L P TY L+ GY K G ++ + + +P + + L C+ F+
Sbjct: 261 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFE------ 314
Query: 240 LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVN 296
M A + M GL+P+ TY+ L+ + K G M +LL ++G
Sbjct: 315 ----KMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNE 370
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY 356
Y +I A +G N+ W M QAG++ + TYT L+ G
Sbjct: 371 FTYTSLIDANCKAG---------------NLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 415
Query: 357 AKHGDM---DSIRRLLAQNGSSLVNGDYLDIIHA 387
K G M + + R + ++G S Y ++H
Sbjct: 416 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHG 449
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 115/300 (38%), Gaps = 32/300 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V L+I Y ALL + + GI PN+ Y + L+ Y +
Sbjct: 401 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVY------TALVHGYIKAE 454
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A KIL+ M + ++ ++I+GH + + IL M G+ + T
Sbjct: 455 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 514
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---- 254
++ Y K G ++ + T + V D GI+ +
Sbjct: 515 TIIDAYFKAGKSSDALNFFQEMQD-------VGVEATIVTYCVLIDGLCEAGIVELAVDY 567
Query: 255 ---MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
M GL+P+ YT L+ G + ++S ++L + + D + AL + G+
Sbjct: 568 FCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPD-ITAFTAL-IDGN 625
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
++ + A+V M++ +E YT L+ G+++ G++ R+ +
Sbjct: 626 LKHGNLQEALVLI----------SRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNE 675
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/219 (18%), Positives = 90/219 (41%), Gaps = 16/219 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E ++ D+ Y +++ + L +++S+GI N V ++ +I Y
Sbjct: 468 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVI------STTIIDAYF 521
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G A + M+D + + LI G +A + A M GL+P+
Sbjct: 522 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVA 581
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA-----SAEG 250
YT L+ G + ++S K ++ + + +T L+ ++ A
Sbjct: 582 VYTSLIDGLCXNNCIESAKKLFDEMQCRG-----MTPDITAFTALIDGNLKHGNLQEALV 636
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+++ M++ +E YT L+ G+++ G++ R+ +
Sbjct: 637 LISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNE 675
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 57/292 (19%)
Query: 67 EDPFSV--HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL 124
E+ FS+ G+L + ++ YNAL+ NE ++ +G+EPN VTY
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY--- 376
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
+ LI C+ G IE A + + MRDK ++ +N+LI G+ + + A G+L+
Sbjct: 377 ---AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSG 433
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
M + GL P+A +Y+ L+ G ++GD+ S C
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNGDLSS----------------CMELHRE--------- 468
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
M++ G+ + T+T L+ G+ K MD RL + S V + ++
Sbjct: 469 ----------MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN--EVTF 516
Query: 305 ALAVSGHGEYIDEVSAIVCFV-NICFHWLEGPMMSQAGLEPSAQTYTKLMCG 355
+ + G+ C V NI + M + GL+P TY L+ G
Sbjct: 517 NVMIEGY-----------CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 128/317 (40%), Gaps = 27/317 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V LD Y A +R Y ++ + + ++ES+G++ + V Y L+ C++
Sbjct: 194 VHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYG------LCKNM 247
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A ++ M + E + L+YG + ++ A I M + G PS +
Sbjct: 248 RVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCS 307
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
++ K ++ + L + F++ + + A+ + M+
Sbjct: 308 FMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGR 367
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
GLEP+ TY L+ K G ++ L + G + Y +I+ G +
Sbjct: 368 GLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS---L 424
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQN 372
D + L G M + GL P+A +Y+ L+ G ++GD+ S + R +A+
Sbjct: 425 DRARGL----------LSG--MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAER 472
Query: 373 GSSLVNGDYLDIIHALA 389
G + N + +I+
Sbjct: 473 GIAWNNYTFTALINGFC 489
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 93/273 (34%), Gaps = 91/273 (33%)
Query: 97 EHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFP 156
E FS KL G+ PN Y + LI K C++ + A ++ + M +
Sbjct: 320 EEAFS---LACKLGDLGMVPNVFAY------NALIDKLCKNERFDDADRLFKEMAGRGLE 370
Query: 157 ISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTK 216
+E + LI+ + + A + M G++ + Y L+ GY K G +D
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDR---- 426
Query: 217 IPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
A G+L+ M + GL P+A +Y+ L+ G +
Sbjct: 427 -------------------------------ARGLLSGMVKEGLTPTAASYSPLIAGLCR 455
Query: 277 HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM 336
+GD+ S L H E
Sbjct: 456 NGDLSSCMEL------------------------HRE----------------------- 468
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
M++ G+ + T+T L+ G+ K MD RL
Sbjct: 469 MAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 113/298 (37%), Gaps = 33/298 (11%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D K+ G+ + Y + I YC+ N++GA ++ M + S +N
Sbjct: 184 DLFDKMLQSGVHLDEYVY------TAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYN 237
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
L+YG + + A + +M G+ TY L+ G+ + M+ ++ +
Sbjct: 238 VLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR---MEELEMALRITHDM 294
Query: 224 SELFLCFSFQLTNLLI--LVSSDMA-SAEGILTMMSQAGLEPSAQTYTKL---MCGYAKH 277
L S + +I L ++ A + + G+ P+ Y L +C +
Sbjct: 295 IRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERF 354
Query: 278 GDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
D D + + +A G Y +IHAL G + +C + M
Sbjct: 355 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM------IEDALCLFD---------KM 399
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSSLVNGDYLDIIHALAVSG 392
G++ + Y L+ GY K G +D R LL+ + G + Y +I L +G
Sbjct: 400 RDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 140/362 (38%), Gaps = 34/362 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ AL+ + ++ K+ + PN VT+ +I YC GNI A +
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG------YCLVGNIRKAFQ 534
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + + +LI G + ++ A + + + + + T L+ G+
Sbjct: 535 LYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFF 594
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G + + SF + L D + + M + G++P
Sbjct: 595 REGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI 654
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
YT ++ +K +M Q G S + +I+ L SG Y+
Sbjct: 655 FYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSG---YLGSAEL-- 709
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL----LAQNGSSLVN 378
+C L G ++ P+ TY + +A GDM+ + L L + +S+V+
Sbjct: 710 ----LCKEMLAGNVL------PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVS 759
Query: 379 GDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVN 435
+ L I L +G + +++SKI G+S D ++ I+ L G I+ A+ + N
Sbjct: 760 FNIL--IKGLCKAGKIQEAIDLMSKITES-GFSPDCISYSTIIHELCKMGDINKAFELWN 816
Query: 436 TL 437
+
Sbjct: 817 EM 818
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 135/309 (43%), Gaps = 31/309 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+R H L + G +PN VTY + L++ +C+ G ++
Sbjct: 156 NVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTY------NTLVAAFCRAGEVD 209
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++++ MR+ + FN+++ G +A M A + M + GL P +Y L+
Sbjct: 210 RAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLV 269
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K G + + + + +F ++ + ++ A G++ M + GL+
Sbjct: 270 GGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQ 329
Query: 262 PSAQTYTKLMCGYAKHGDMD----SVRRLL-AQSGSSLVNGDYLDIIHALAVSGHGEYID 316
+ T+T L+ G+ K G +D +VR + + S+V Y +I+ + G +D
Sbjct: 330 MNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVC--YNALINGYCMVGR---MD 384
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
E +V M G++P TY+ ++ Y K+GD S +L N L
Sbjct: 385 EARELV------------REMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQL---NQQML 429
Query: 377 VNGDYLDII 385
NG D I
Sbjct: 430 ENGVLPDAI 438
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 120/295 (40%), Gaps = 40/295 (13%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ Y + A++ +GI P+ VT+ + LI C+ GN+E A
Sbjct: 265 YNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTF------TSLIHVMCKAGNLERAVG 318
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
++ MR++ ++E F ALI G + + A + M Q ++PS Y L+ GY
Sbjct: 319 LVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYC 378
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
G MD + + ++ + ++ + D SA + M + G+ P A
Sbjct: 379 MVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAI 438
Query: 266 TYTKL---MCGYAKHGDMDSVRRLLAQSG--------SSLVNGDYLDIIHALAVSGHGEY 314
TY+ L +C + GD + + + G +SL++G + A+S H E
Sbjct: 439 TYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDE- 497
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
M +AG+ P TY+ L+ G +K +RLL
Sbjct: 498 ----------------------MVKAGVLPDVVTYSVLINGLSKSARTKEAQRLL 530
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 107/282 (37%), Gaps = 26/282 (9%)
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
D ++ A + + M + +N L+ A +L M AG +P+A T
Sbjct: 135 DASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVT 194
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y L+ + + G++D + + ++ +F I + M A + M
Sbjct: 195 YNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMV 254
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH-- 311
+ GL P +Y L+ GY K G + A+ + D + +IH + +G+
Sbjct: 255 KEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLE 314
Query: 312 ------------GEYIDEVSAIVCFVNICFH-WLEGPM-----MSQAGLEPSAQTYTKLM 353
G ++E++ C +L+ + M Q ++PS Y L+
Sbjct: 315 RAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALI 374
Query: 354 CGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSG 392
GY G MD R L+ + + V D Y I+ A +G
Sbjct: 375 NGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ +L Y N T S ++ G+ P+ +TY S LI C++ +
Sbjct: 401 DVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITY------SSLIRVLCEEKRLG 454
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M E + +LI GH + ++ A + M +AG+ P TY+ L+
Sbjct: 455 DAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLI 514
Query: 202 CGYAK 206
G +K
Sbjct: 515 NGLSK 519
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK---------LIS 132
D+ Y+ L+ + T L KL + P + Y L+ + L+
Sbjct: 506 DVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLK 565
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C G + A K+ + + D+ + + V++ LI+GH + ++ A M Q G P
Sbjct: 566 GFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAP 625
Query: 193 SAQTYTKLMCGYAKHG 208
++ + L+ G + G
Sbjct: 626 NSTSTISLIRGLFEKG 641
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 57/292 (19%)
Query: 67 EDPFSV--HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL 124
E+ FS+ G+L + ++ YNAL+ NE ++ +G+EPN VTY
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY--- 376
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
+ LI C+ G IE A + + MRDK ++ +N+LI G+ + + A G+L+
Sbjct: 377 ---AILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSG 433
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
M + GL P+A +Y+ L+ G ++GD+ S C
Sbjct: 434 MVKEGLTPTAASYSPLIAGLCRNGDLSS----------------CMELHRE--------- 468
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
M++ G+ + T+T L+ G+ K MD RL + S V + ++
Sbjct: 469 ----------MAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPN--EVTF 516
Query: 305 ALAVSGHGEYIDEVSAIVCFV-NICFHWLEGPMMSQAGLEPSAQTYTKLMCG 355
+ + G+ C V NI + M + GL+P TY L+ G
Sbjct: 517 NVMIEGY-----------CLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 128/317 (40%), Gaps = 27/317 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V LD Y A +R Y ++ + + ++ES+G++ + V Y L+ C++
Sbjct: 194 VHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYG------LCKNM 247
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A ++ M + E + L+YG + ++ A I M + G PS +
Sbjct: 248 RVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCS 307
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
++ K ++ + L + F++ + + A+ + M+
Sbjct: 308 FMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGR 367
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
GLEP+ TY L+ K G ++ L + G + Y +I+ G +
Sbjct: 368 GLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGS---L 424
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQN 372
D + L G M + GL P+A +Y+ L+ G ++GD+ S + R +A+
Sbjct: 425 DRARGL----------LSG--MVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAER 472
Query: 373 GSSLVNGDYLDIIHALA 389
G + N + +I+
Sbjct: 473 GIAWNNYTFTALINGFC 489
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 93/273 (34%), Gaps = 91/273 (33%)
Query: 97 EHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFP 156
E FS KL G+ PN Y + LI K C++ + A ++ + M +
Sbjct: 320 EEAFS---LACKLGDLGMVPNVFAY------NALIDKLCKNERFDDADRLFKEMAGRGLE 370
Query: 157 ISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTK 216
+E + LI+ + + A + M G++ + Y L+ GY K G +D
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDR---- 426
Query: 217 IPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
A G+L+ M + GL P+A +Y+ L+ G +
Sbjct: 427 -------------------------------ARGLLSGMVKEGLTPTAASYSPLIAGLCR 455
Query: 277 HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM 336
+GD+ S L H E
Sbjct: 456 NGDLSSCMEL------------------------HRE----------------------- 468
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
M++ G+ + T+T L+ G+ K MD RL
Sbjct: 469 MAERGIAWNNYTFTALINGFCKDKKMDEAARLF 501
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 113/298 (37%), Gaps = 33/298 (11%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D K+ G+ + Y + I YC+ N++GA ++ M + S +N
Sbjct: 184 DLFDKMLQSGVHLDEYVY------TAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYN 237
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
L+YG + + A + +M G+ TY L+ G+ + M+ ++ +
Sbjct: 238 VLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR---MEELEMALRITHDM 294
Query: 224 SELFLCFSFQLTNLLI--LVSSDMA-SAEGILTMMSQAGLEPSAQTYTKL---MCGYAKH 277
L S + +I L ++ A + + G+ P+ Y L +C +
Sbjct: 295 IRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERF 354
Query: 278 GDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
D D + + +A G Y +IHAL G + +C + M
Sbjct: 355 DDADRLFKEMAGRGLEPNEVTYAILIHALCKRGM------IEDALCLFD---------KM 399
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSSLVNGDYLDIIHALAVSG 392
G++ + Y L+ GY K G +D R LL+ + G + Y +I L +G
Sbjct: 400 RDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 72/362 (19%), Positives = 140/362 (38%), Gaps = 34/362 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ AL+ + ++ K+ + PN VT+ +I YC GNI A +
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG------YCLVGNIRKAFQ 534
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + + +LI G + ++ A + + + + + T L+ G+
Sbjct: 535 LYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFF 594
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G + + SF + L D + + M + G++P
Sbjct: 595 REGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDI 654
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
YT ++ +K +M Q G S + +I+ L SG Y+
Sbjct: 655 FYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSG---YLGSAEL-- 709
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL----LAQNGSSLVN 378
+C L G ++ P+ TY + +A GDM+ + L L + +S+V+
Sbjct: 710 ----LCKEMLAGNVL------PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVS 759
Query: 379 GDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVN 435
+ L I L +G + +++SKI G+S D ++ I+ L G I+ A+ + N
Sbjct: 760 FNIL--IKGLCKAGKIQEAIDLMSKITES-GFSPDCISYSTIIHELCKMGDINKAFELWN 816
Query: 436 TL 437
+
Sbjct: 817 EM 818
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 145/363 (39%), Gaps = 70/363 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L R Y N T + ++++ + PN T +I+ YC++G ++
Sbjct: 246 DVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTC------GIIINGYCKEGKMK 299
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + L MR+ + +FN+LI G D + LT+M + G++P T++ +M
Sbjct: 300 DALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIM 359
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
++ G MD + E+F DM +AG+E
Sbjct: 360 NAWSSVGLMDKCQ----------EIF---------------DDMV----------KAGIE 384
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
P ++ L GY + G+ + LL G S V + + II +G EY V
Sbjct: 385 PDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYASRV 444
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD---MDSIRRLLAQNGSS 375
+C + IC P+ +T+ L+ GY + + + + +++ Q G +
Sbjct: 445 YEKMCEMGIC---------------PNLKTFETLIWGYGEAKEPQKAEELLQIMEQKGVA 489
Query: 376 LVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSAD----AANHIYHLINKGQID 428
V D HAL ++ + I + + P V S AA + + K +
Sbjct: 490 PVKSTIQLVADAWHALGLANEAKRIKNDVEE-APKVMISTKEDDVAAESLERIYQKQNLK 548
Query: 429 AAY 431
A+Y
Sbjct: 549 ASY 551
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 145/350 (41%), Gaps = 41/350 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y LL + S ++KLE G++P+ V + + +I+ + + GN++ A K
Sbjct: 109 YTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFF------NAMINAFSESGNVKEAMK 162
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ-AGLEPSAQTYTKLM--- 201
I M+D+ + FN LI G+ A +L +MSQ ++P+ +T+ L+
Sbjct: 163 IFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAW 222
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
C + + ++ K+ + Q ++ ++ + + + AEG++ M +
Sbjct: 223 CNKKRITEAWNVVYKMAASGLQPDV---VTYNTLARAYAQNGETSRAEGMILEMQNNRVM 279
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSG-----------SSLVNGDYLDIIHALAVSG 310
P+ +T ++ GY K G M R L + +SL+ G +LDI V
Sbjct: 280 PNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKG-FLDITDTDGVDE 338
Query: 311 HGEYIDEVSA---IVCFVNICFHWLEGPMMS----------QAGLEPSAQTYTKLMCGYA 357
++E +V F I W +M +AG+EP ++ L GY
Sbjct: 339 ALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYV 398
Query: 358 KHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI 404
+ G+ + LL G S V + + II +G EY + K+
Sbjct: 399 RAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYASRVYEKM 448
>gi|449675887|ref|XP_004208510.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like, partial [Hydra magnipapillata]
Length = 513
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 42/212 (19%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQG-IEPNRVTYQQLISNSKLISKYCQD 137
+P++I +N LL VY++N+ F P DFL L +EPN+ T+ S LI Y +
Sbjct: 149 IPMNIGLWNTLLSVYIENKRDFDPVDFLNDLRKNSQLEPNQTTF------SLLIQMYAER 202
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G+ G KI+EFM +K F ++E ++ LI + + + ++ M + G+ P + Y
Sbjct: 203 GDPPGVMKIIEFMMEKGFVMTENMYAWLIKAFAINGNFEGVKHVMKSMRENGIPPKEKVY 262
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
+++ A GD++ I E L M++
Sbjct: 263 KQIINALALRGDLEKI-----------------------------------EDTLNEMTK 287
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
G+ P+ + Y L+ ++ G D ++ L +
Sbjct: 288 KGISPTVELYMGLLNNLSEGGHRDLIKTTLGK 319
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 21/158 (13%)
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSG 310
+ + LEP+ T++ L+ YA+ GD V ++ + + G + Y +I A A++G
Sbjct: 179 LRKNSQLEPNQTTFSLLIQMYAERGDPPGVMKIIEFMMEKGFVMTENMYAWLIKAFAING 238
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL- 369
+ E + V M + G+ P + Y +++ A GD++ I L
Sbjct: 239 NFEGVKHVMK---------------SMRENGIPPKEKVYKQIINALALRGDLEKIEDTLN 283
Query: 370 --AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
+ G S Y+ +++ L+ GH + I + KI+
Sbjct: 284 EMTKKGISPTVELYMGLLNNLSEGGHRDLIKTTLGKIE 321
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 134/325 (41%), Gaps = 62/325 (19%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N L+ Y + +T + +++ QGI + VTY S L+ C +G +E K
Sbjct: 261 FNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTY------SALVWGLCSEGKVEEGVK 314
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+++ M+D + N+++ G + M AEG + M Q ++P+ TYT L+ GY
Sbjct: 315 LVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYR 374
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ +D +K A + MS G+ P+A+
Sbjct: 375 R---LDKMK--------------------------------DALAVKEAMSGKGVRPNAR 399
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIV 322
Y L+ G+ ++GD SV LL + V D Y +I AL V G EV V
Sbjct: 400 IYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKG------EVRKAV 453
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNG 379
++ M GLEP TY ++ GY + G++ S IR + +
Sbjct: 454 KLLD---------EMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVV 504
Query: 380 DYLDIIHALAVSGHGEYIDEIISKI 404
Y I L G E +E+++++
Sbjct: 505 TYNVFIKCLCRMGKMEETNELLNEM 529
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 120/337 (35%), Gaps = 99/337 (29%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ GI PN VT+ L++ YC+D N A ++ E M+ + S ++A
Sbjct: 245 LLKEMVEAGISPNEVTFNVLVNG------YCKDSNTAAAVRVFEEMKQQGIAASVVTYSA 298
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
L++G + ++ M GL P+ T ++ G+ K G M
Sbjct: 299 LVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMM-------------- 344
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
AEG + M Q ++P+ TYT L+ GY + M
Sbjct: 345 ---------------------TDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKD-- 381
Query: 285 RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
ALAV MS G+ P
Sbjct: 382 --------------------ALAVK-------------------------EAMSGKGVRP 396
Query: 345 SAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEII 401
+A+ Y L+ G+ ++GD S+ LL + V D Y +I AL V G + + +
Sbjct: 397 NARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGE---VRKAV 453
Query: 402 SKIQPGVGYSADAANHIYHLI-----NKGQIDAAYRI 433
+ + + + Y+ I KG I +AY I
Sbjct: 454 KLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEI 490
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 12/179 (6%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ +G+ PN Y LI+ + ++G+ + +L+ MR K +N LI
Sbjct: 389 MSGKGVRPNARIYNCLIAG------FTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGA 442
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSE 225
++ A +L M GLEP TY ++ GY + G++ S I+T++ K ++
Sbjct: 443 LCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRAN 502
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ ++ + + M +L M + GL P+ TY + G + G VR
Sbjct: 503 V---VTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPDVR 558
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 117/282 (41%), Gaps = 40/282 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y A++ Y + L + G+EPN TY LI +C+ G +E
Sbjct: 235 DVYLYTAVINAYCRAGNMRRAAKVLDECVGNGVEPNERTYGVLIKG------FCKIGQME 288
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L M+ + +++ +FN +I G+ + + A I M + G+E + TY L
Sbjct: 289 AAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLA 348
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
CG + G +P+ + L S + DM A + M++ G
Sbjct: 349 CGLCRMG-------VVPNYVTYTTL---ISIHCKD------GDMVEARRLFREMAEKGAT 392
Query: 262 PSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
PS TY+ ++ GYAK G + + R+ + + G Y ++H V+G
Sbjct: 393 PSVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGK------- 445
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
V++ E M Q G EP+ YT L+ G AK G
Sbjct: 446 ------VDVALKLFE--EMKQRGTEPNVVAYTALISGLAKEG 479
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 140/322 (43%), Gaps = 20/322 (6%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S ++ C+ G ++ A ++L+ M ++ +N+L+ + + D + IL +M
Sbjct: 135 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 194
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
G+E + TYT L+ + D+ ++ +K + + + + + +M
Sbjct: 195 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 254
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
A +L G+EP+ +TY L+ G+ K G M++ LLA V + II
Sbjct: 255 AAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLN--QIIFNTM 312
Query: 308 VSGHGE--YIDE-------VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+ G+ +D+ + I +NI + + + G+ P+ TYT L+ + K
Sbjct: 313 IDGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCK 372
Query: 359 HGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA 415
GDM RRL +A+ G++ Y +IH A G + +++ G+ D
Sbjct: 373 DGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEMEKK-GFVPDVY 431
Query: 416 NHIY----HLINKGQIDAAYRI 433
+ H +N G++D A ++
Sbjct: 432 TYASLVHGHCVN-GKVDVALKL 452
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+ ++ Y F ++E +G P+ TY L+ +C +G ++ A K
Sbjct: 398 YSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHG------HCVNGKVDVALK 451
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ E M+ + + + ALI G ++ +A + M +AGL P Y+ L+
Sbjct: 452 LFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 507
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 120/312 (38%), Gaps = 64/312 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN++L Y + FL K+ S G+EP+ VTY S L+ C++G
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTY------SLLMDYLCKNGRCM 318
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A KI + M + + L+ G++ + G+L +M + G+ P ++ L+
Sbjct: 319 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILI 378
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
C YA G +D + L FS M Q GL
Sbjct: 379 CAYANQGKVD-------------QAMLVFS----------------------KMRQQGLN 403
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDE- 317
P+A TY ++ K G ++ Q G S N Y +IH L E +E
Sbjct: 404 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 463
Query: 318 ----VSAIVCFVNICF------HWLEG---------PMMSQAGLEPSAQTYTKLMCGYAK 358
+ +C I F H EG +M + G++P+ TY L+ GY
Sbjct: 464 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCL 523
Query: 359 HGDMDSIRRLLA 370
G MD +LL+
Sbjct: 524 AGKMDEAMKLLS 535
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 133/333 (39%), Gaps = 26/333 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFL---AKLESQGIEPNRVTYQQLISNSKLIS 132
EL ++ YN LL+ D + + L A G P+ V+Y + +I+
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY------TTVIN 204
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ ++G+ + A M D+ +N++I +A M A +L M + G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
TY ++ GY G + ++ ++ L + + A I
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD-YLDIIHALAVSGH 311
M++ GL+P TY L+ GYA G + + LL + ++ D Y+ I A +
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQ 384
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
G+ +D+ A++ F M Q GL P+A TY ++ K G ++ Q
Sbjct: 385 GK-VDQ--AMLVF----------SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQ 431
Query: 372 ---NGSSLVNGDYLDIIHALAVSGHGEYIDEII 401
G S N Y +IH L E +E+I
Sbjct: 432 MIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI 464
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/192 (19%), Positives = 83/192 (43%), Gaps = 6/192 (3%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+L+ + + ++ +GI N + + +I + +C++G + + K
Sbjct: 444 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS------HCKEGRVIESEK 497
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M + +N LI G+ A M A +L+ M GL+P+ TY+ L+ GY
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K M+ ++ ++ + + + A+A+ + ++++G +
Sbjct: 558 KISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS 617
Query: 266 TYTKLMCGYAKH 277
TY ++ G K+
Sbjct: 618 TYNIILHGLCKN 629
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 157/367 (42%), Gaps = 33/367 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E +V D+ Y L+ + + L ++E +G P+ VTY +I C
Sbjct: 229 EANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGG------LC 282
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G ++ A ++ + M K ++ LI G + A+ +L M GL+P
Sbjct: 283 RAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHV 342
Query: 196 TYTKLMCGYAKHGDM-DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
YT L+ G+ + GD ++ + K L +L L F++ + DM A+ +L
Sbjct: 343 AYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNL-FTYNALVKGVCKFGDMEKADALLNE 401
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNGDYLDIIHALAVSGHGE 313
M G++P QTY ++ GY K + V+ LL++ S+LV Y + + HG
Sbjct: 402 MIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGS 461
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
I++ S + +M G++P+A YT L+ G+ + G R+L
Sbjct: 462 -IEDASRVF------------EIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMD 508
Query: 374 SSLVNGD---YLDIIHALAVSGHGE----YIDEIISK-IQPGVGYSADAANHIYHLINKG 425
V D Y +I L S E Y+ E+I + ++P V Y+ A H Y G
Sbjct: 509 KKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNV-YTYGALIHGY--CKSG 565
Query: 426 QIDAAYR 432
++ A R
Sbjct: 566 EMQVADR 572
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 176/429 (41%), Gaps = 63/429 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+AL+ L N + L++ +G+ P+ TY +IS +C+ G I
Sbjct: 620 DVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISG------FCKQGGIG 673
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ E+M K + +NALI G +A ++ A + + GL +A TY ++
Sbjct: 674 KAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATII 733
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM- 255
GY K G++ + + + P S ++ + LI + E L++
Sbjct: 734 DGYCKSGNLSKAFRLFDEMTLKGVPPDSFVY--------SALIDGCRKEGNTEKALSLFL 785
Query: 256 --SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
Q G S + LM G+ K G + +LL V D+ + + + + H +
Sbjct: 786 ESVQKGF-ASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDH--VTYTILIDYHCK 842
Query: 314 --YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
++ E FV+ M + L P+A TYT L+ GY G + L +
Sbjct: 843 TGFLKEAEQF--FVD----------MQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDE 890
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEI--ISKIQPGVGYSADAANHIYHLINKGQIDA 429
+ + D + ++ + H + D + + + + + + ++ H+
Sbjct: 891 MIAKDIEPD--GVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHV-------- 940
Query: 430 AYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINK-GQIDAA 488
+++ L R +++ E L V + K + G+ S + + +K G++D A
Sbjct: 941 ---LIDPLCRKEHVS-EVLKV-------LEKIEEQGLNLSLATCSTLVRCFHKAGKMDGA 989
Query: 489 YRIVNTLAR 497
R++ ++ R
Sbjct: 990 ARVLKSMVR 998
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 121/299 (40%), Gaps = 44/299 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L++ ++ L ++ +G++P+ + Y NS +I C+ +E A
Sbjct: 484 YTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCY-----NSVIIG-LCKSRKMEEAKD 537
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
L M ++ + + ALI+G+ ++ +M A+ M G+ P+ T L+ GY
Sbjct: 538 YLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYC 597
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCF-------SFQLTNLLI---LVSSDMASAEGILTMM 255
K G S + +F C + + LI L + + A +L+
Sbjct: 598 KEG----------STTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF 647
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHG 312
+ GL P TY ++ G+ K G + +L + Q G S Y +I+ L +G
Sbjct: 648 LEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEI 707
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
E E+ F + G GL +A TY ++ GY K G++ RL +
Sbjct: 708 ERAREL----------FDGIPGK-----GLAHNAVTYATIIDGYCKSGNLSKAFRLFDE 751
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 110/294 (37%), Gaps = 59/294 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y AL+ Y + + ++ GI PN V + LI YC++G+
Sbjct: 550 NVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVC------TALIDGYCKEGSTT 603
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
AT I M ++ ++ALI+G + + A +L+ + GL P TY ++
Sbjct: 604 EATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSII 663
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K G + +FQL M Q G+
Sbjct: 664 SGFCKQGGIGK------------------AFQLHEY-----------------MCQKGIS 688
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL-AQSGSSLVNG--DYLDIIHALAVSGHGEYIDEV 318
P+ TY L+ G K G+++ R L G L + Y II SG+
Sbjct: 689 PNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGN------- 741
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
++ F + M+ G+ P + Y+ L+ G K G+ + L ++
Sbjct: 742 ------LSKAFRLFD--EMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLES 787
>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
Length = 496
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 126/320 (39%), Gaps = 51/320 (15%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI-------------------- 125
Y AL+ Y + ++ G+EPN TY LI
Sbjct: 76 YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP 135
Query: 126 ---------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
S + LI+ C+ G + A K+L+ MR + S FN L+ G+ +A M+
Sbjct: 136 VRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMS 195
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236
+A M AG +PSA TY L+ G+ + DM + +K + ++ +
Sbjct: 196 NALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILI 255
Query: 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN 296
+ M A IL M +AGLE A TY L+ G+M R+L G V
Sbjct: 256 DSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVE 315
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY---TKLM 353
++I+ + + G+G A+ + M Q GL P++ +Y +++
Sbjct: 316 PS--NVIYDMMIYGYGREGSSYKALKLIME----------MRQKGLIPNSASYGLTIRVL 363
Query: 354 C-------GYAKHGDMDSIR 366
C A DM++IR
Sbjct: 364 CKDDKCQEAEALLDDMETIR 383
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 118/301 (39%), Gaps = 29/301 (9%)
Query: 131 ISKYCQDGNIEGATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+ + C G++ A +L + + AL+ G + D+A A + M G
Sbjct: 9 VRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLG 68
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS-----IKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
L P+ TYT LM GY HG + + + ++P + C + + +
Sbjct: 69 LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCR-----TGE 123
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
A + M G+ + +Y L+ G +HG + +LL + I
Sbjct: 124 FERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSI--ITF 181
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
L V G+G+ ++S + F N M AG +PSA TY L+ G+ + DM
Sbjct: 182 NLLVDGYGK-AGKMSNALPFFN---------QMKAAGFQPSAVTYNMLIAGFCRARDMTR 231
Query: 365 IRRLLA---QNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHL 421
R L+ + G Y +I + A H EI++ ++ G DA H Y +
Sbjct: 232 ANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK-AGLEVDA--HTYGV 288
Query: 422 I 422
+
Sbjct: 289 L 289
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 116/306 (37%), Gaps = 55/306 (17%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+ L++ C+ G++ A ++ + M +E + AL++G+ + M +
Sbjct: 42 TALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRR 101
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMD-------------------SIKTKIPSLKPQSELFL 228
G+EP+ TY L+ + + G+ + S T I L +L+
Sbjct: 102 GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD 161
Query: 229 CF-------------SFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
S NLL+ + M++A M AG +PSA TY L+
Sbjct: 162 AAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIA 221
Query: 273 GYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICF 329
G+ + DM R L+ + G Y +I + A H + F
Sbjct: 222 GFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENH-------------MGKAF 268
Query: 330 HWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALA 389
L G M +AGLE A TY L+ G+M R+L G V ++I+ +
Sbjct: 269 EILAG--MEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPS--NVIYDMM 324
Query: 390 VSGHGE 395
+ G+G
Sbjct: 325 IYGYGR 330
>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
Length = 467
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 126/320 (39%), Gaps = 51/320 (15%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI-------------------- 125
Y AL+ Y + ++ G+EPN TY LI
Sbjct: 76 YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP 135
Query: 126 ---------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
S + LI+ C+ G + A K+L+ MR + S FN L+ G+ +A M+
Sbjct: 136 VRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMS 195
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236
+A M AG +PSA TY L+ G+ + DM + +K + ++ +
Sbjct: 196 NALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILI 255
Query: 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN 296
+ M A IL M +AGLE A TY L+ G+M R+L G V
Sbjct: 256 DSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVE 315
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY---TKLM 353
++I+ + + G+G A+ + M Q GL P++ +Y +++
Sbjct: 316 PS--NVIYDMMIYGYGREGSSYKALKLIME----------MRQKGLIPNSASYGLTIRVL 363
Query: 354 C-------GYAKHGDMDSIR 366
C A DM++IR
Sbjct: 364 CKDDKCQEAEALLDDMETIR 383
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 120/302 (39%), Gaps = 31/302 (10%)
Query: 131 ISKYCQDGNIEGATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+ + C G++ A +L + + AL+ G + D+A A + M G
Sbjct: 9 VRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLG 68
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS-----IKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
L P+ TYT LM GY HG + + + ++P + C + + +
Sbjct: 69 LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCR-----TGE 123
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII- 303
A + M G+ + +Y L+ G +HG + +LL + G II
Sbjct: 124 FERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTE---GTRPSIIT 180
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
L V G+G+ ++S + F N M AG +PSA TY L+ G+ + DM
Sbjct: 181 FNLLVDGYGK-AGKMSNALPFFN---------QMKAAGFQPSAVTYNMLIAGFCRARDMT 230
Query: 364 SIRRLLA---QNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH 420
R L+ + G Y +I + A H EI++ ++ G DA H Y
Sbjct: 231 RANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK-AGLEVDA--HTYG 287
Query: 421 LI 422
++
Sbjct: 288 VL 289
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 116/306 (37%), Gaps = 55/306 (17%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+ L++ C+ G++ A ++ + M +E + AL++G+ + M +
Sbjct: 42 TALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRR 101
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMD-------------------SIKTKIPSLKPQSELFL 228
G+EP+ TY L+ + + G+ + S T I L +L+
Sbjct: 102 GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD 161
Query: 229 CF-------------SFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
S NLL+ + M++A M AG +PSA TY L+
Sbjct: 162 AAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIA 221
Query: 273 GYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICF 329
G+ + DM R L+ + G Y +I + A H + F
Sbjct: 222 GFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENH-------------MGKAF 268
Query: 330 HWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALA 389
L G M +AGLE A TY L+ G+M R+L G V ++I+ +
Sbjct: 269 EILAG--MEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPS--NVIYDMM 324
Query: 390 VSGHGE 395
+ G+G
Sbjct: 325 IYGYGR 330
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 130/331 (39%), Gaps = 37/331 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E+ P D+ Y L+ Y + L + ++G+EPN Y + +++ C
Sbjct: 287 EMASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVY------TSVVALLC 340
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G + A ++E M + E V+ ++ G D+ SA M + GL
Sbjct: 341 DKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGV 400
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS-----SDMASAEG 250
TYT L+ G + G++ + + Q L +LV MA A
Sbjct: 401 TYTTLINGLCRAGELKEAEKVL-----QEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQ 455
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALA 307
+ M Q G+ P+ TYT L G K GD+ + LL + G L Y +I+ L
Sbjct: 456 VHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLC 515
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
+G Y+D+ + M AGL+P TYT L+ K G++D
Sbjct: 516 KAG---YLDQAMRTMA------------DMDAAGLKPDVYTYTTLIDALCKSGELDRAHD 560
Query: 368 LLAQ---NGSSLVNGDYLDIIHALAVSGHGE 395
LL + NG Y +++ +SG E
Sbjct: 561 LLQEMLDNGIKPTIVTYNVLMNGFCMSGRVE 591
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 152/364 (41%), Gaps = 46/364 (12%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V LD + Y +L + + S + +++ +G+ + VTY + LI+ C+ G
Sbjct: 360 VILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTY------TTLINGLCRAG 413
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A K+L+ M + + E + L+ G+ + MA A + M Q G+ P+ TYT
Sbjct: 414 ELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYT 473
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQS-ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
L G K GD+ + + + + EL C L N L + A + M
Sbjct: 474 ALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGY-LDQAMRTMADMDA 532
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG------DYLDIIHALAVSGH 311
AGL+P TYT L+ K G++D LL + L NG Y +++ +SG
Sbjct: 533 AGLKPDVYTYTTLIDALCKSGELDRAHDLLQE---MLDNGIKPTIVTYNVLMNGFCMSGR 589
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
E ++ W M + + P+A TY LM Y +M S +
Sbjct: 590 VEGGKKL----------LEW-----MLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIY-- 632
Query: 372 NGSSLVNGDYLDIIHALAVSGHGE---------YIDEIISKIQPGVGYSADAANHIYHLI 422
G N + + + + + GH + + +E+I K G +A + + + L+
Sbjct: 633 KGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEK---GFRLTASSYSALIRLL 689
Query: 423 NKGQ 426
NK +
Sbjct: 690 NKKK 693
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 131/324 (40%), Gaps = 26/324 (8%)
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
+ + S + L+ C G +E A ++ + M ++ G+ LI+G+ ++ +A +
Sbjct: 260 KNVCSYNILLKVLCGAGRVEDARQLFDEMASPPDVVTYGI---LIHGYCALGELENAVKL 316
Query: 182 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV 241
L M G+EP+A YT ++ G + T + + + +
Sbjct: 317 LDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCN 376
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD 301
D+ SA M + GL TYT L+ G + G++ ++L + + ++ D +
Sbjct: 377 KGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVD--E 434
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+ + + V G+ + A M Q G+ P+ TYT L G K GD
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVH----------NTMVQRGVAPNVVTYTALSDGLCKQGD 484
Query: 362 MDSIRRLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI--QPGVGYSADAAN 416
+ + LL + G L Y +I+ L +G Y+D+ + + G D
Sbjct: 485 VQAANELLHEMSNKGLELNACTYNSLINGLCKAG---YLDQAMRTMADMDAAGLKPDVYT 541
Query: 417 H---IYHLINKGQIDAAYRIVNTL 437
+ I L G++D A+ ++ +
Sbjct: 542 YTTLIDALCKSGELDRAHDLLQEM 565
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 149/351 (42%), Gaps = 23/351 (6%)
Query: 68 DPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
D FS E +P D+ Y+++L + + T ++ + + PN+VT+
Sbjct: 101 DFFSEMVKE-GIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTF------ 153
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+ LI C+ I A + E M +K +NAL+ G+ + M A+ + +M +
Sbjct: 154 TILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDR 213
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
G P+ ++Y L+ G+ K G +D K + + +S F++
Sbjct: 214 KGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQE 273
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
A+ +L M GL P+ TY+ ++ G KHG +D LL S + + I+ +
Sbjct: 274 AQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIF--IYTIL 331
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG---DMDS 364
+ G + +A F N+ G++P+ TYT ++ G K G +
Sbjct: 332 IEGMCTFGKLEAARELFSNLFVK----------GIQPTVVTYTVMISGLLKGGLSNEACE 381
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA 415
+ R +A NG + Y II +G +I ++ G G+SAD++
Sbjct: 382 LFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEM-VGKGFSADSS 431
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 155/416 (37%), Gaps = 87/416 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN ++ + DF +++ +GI P+ TY S ++ +C G +
Sbjct: 79 NVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTY------SSILHGFCNLGRVN 132
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
AT + + M ++ ++ F LI G + ++ A + M++ GLEP TY L+
Sbjct: 133 EATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALV 192
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY MD A+ + +M + G
Sbjct: 193 DGYCSRSQMD-----------------------------------EAQKLFNIMDRKGCA 217
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
P+ ++Y L+ G+ K G +D + LLA+ + D Y ++ G + E+
Sbjct: 218 PNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQEL 277
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
+C GL P+ TY+ ++ G KHG +D LL S +
Sbjct: 278 LKEMC---------------SYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIE 322
Query: 379 GD---YLDIIHALAVSGHGEYIDEIISK-----IQPGV-------------GYSADAANH 417
+ Y +I + G E E+ S IQP V G S +A
Sbjct: 323 PNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACEL 382
Query: 418 IYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAA 473
+ G + + N + + NG+ P L+ MV G G+SAD++
Sbjct: 383 FREMAVNGCLPNSC-TYNVIIQGFLRNGDT-PNAVRLIEEMV-----GKGFSADSS 431
>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 727
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 156/365 (42%), Gaps = 65/365 (17%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ YN L+R Y+ ++ + ++E +GI PN T+ S +IS Y GN+E
Sbjct: 158 VHAYNNLIRAYIMAQNLQGAVSCVEEMEIEGIFPNAATF------SAIISGYGSSGNVEA 211
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A K + + + + +++++I+ + +A +M AE ++ M + GLE + Y LM
Sbjct: 212 AEKWFQRSVSENWNHNVAIYSSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMD 271
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLC-FSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYA+ C Q N+ + + + + GL
Sbjct: 272 GYAR----------------------CHIEAQCLNVFHKLKARIDT-----------GLS 298
Query: 262 PSAQTYTKLMCGYAKHGDM----DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
P+A TY L+ Y K G M + + + AQ G +L Y ++ V G+ + D
Sbjct: 299 PTAVTYGCLINLYTKLGKMMKALEFCKEMKAQ-GITLNRNTY-----SMLVDGYVQLGDF 352
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGS 374
+A F + MS+AG+EP TY L+ + K M +LL + G
Sbjct: 353 ANAFSVFED----------MSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGC 402
Query: 375 SLVNGDYLDIIHALAVSGHGEYIDEIISKIQ-PGVGYSADAANHIYH-LINKGQIDAAYR 432
S Y+ II +G + +S+++ G +A N I H L+ GQID A
Sbjct: 403 SPTIQTYITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAAS 462
Query: 433 IVNTL 437
+++ +
Sbjct: 463 VIDEM 467
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 128/305 (41%), Gaps = 39/305 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ +Y +F ++++QGI NR TY S L+ Y Q G+ A
Sbjct: 304 YGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTY------SMLVDGYVQLGDFANAFS 357
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M + +N L+ ++ M A +L M G P+ QTY ++ G+
Sbjct: 358 VFEDMSEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFM 417
Query: 206 KHGDMD-SIKT----KIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
K GD+ + KT K+ +P + ++ + NL+ L D A++ ++ M AG+
Sbjct: 418 KTGDVRMAYKTVSEMKLAGCRPNATT---YNVIMHNLVQLGQIDRAAS--VIDEMELAGV 472
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG---DYLDIIHALAVSGHGEYIDE 317
+P+ ++YT LM G+A G++ + L + Y ++ A +G +
Sbjct: 473 QPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIA 532
Query: 318 VSAIVCFV-----NICFH-----WLE-GPM---------MSQAGLEPSAQTYTKLMCGYA 357
V+ + F N F+ W + G M M Q G P +YT +
Sbjct: 533 VTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACC 592
Query: 358 KHGDM 362
K GDM
Sbjct: 593 KAGDM 597
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
+IS + L+ C+ G ++ A + E M P++ +FN L+ G +Q DM A GI+
Sbjct: 511 IISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQ 570
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
M Q G P +YT + K GDM I +K Q L + Q +LI +
Sbjct: 571 KMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQD---LQPNLQTYTILIHGWT 627
Query: 244 DMASAEGILTM---MSQAGLEPSAQTY 267
++ E L M AGL P Y
Sbjct: 628 SVSHPEKALICYDEMKAAGLIPDKPLY 654
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 11/244 (4%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLA-KLESQGIEPNRVTYQQLISNS 128
+ GEL + +I YNALL N FS D L ++ +G+EPN VTY +
Sbjct: 324 LACQLGELRMVPNIFAYNALLNNMCKN-GMFSEADRLVNEMSDKGLEPNEVTY------A 376
Query: 129 KLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
LI C+ G ++ A +L+ MR+K ++ +N+LI + +D+ A G L+ M +
Sbjct: 377 ILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEI 436
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASA 248
GL P+A +Y+ ++ G + GD+ + + + ++F + M A
Sbjct: 437 GLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEA 496
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHA 305
+ M+++ LEP+ T+ ++ GY GD+ +L Q G + N Y +I
Sbjct: 497 SRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISG 556
Query: 306 LAVS 309
L ++
Sbjct: 557 LCLT 560
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 121/287 (42%), Gaps = 27/287 (9%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+NAL+ + + A+ ++ MS GLEP+ TY L+ K G MD + ++
Sbjct: 340 YNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMR 399
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
+ + + D+ A G L+ M + GL P+A +Y+ ++ G + GD+
Sbjct: 400 EKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLS 459
Query: 282 S---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
+ R +A+ G + + +I+ + +DE S + M+
Sbjct: 460 GAVELHRKMAEKGVAWNTYTFTALINGFC---KAKKMDEASRLF------------NKMT 504
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGSSLVNGDYLDIIHALAVSGHGE 395
++ LEP+ T+ ++ GY GD+ +L Q G + N Y +I L ++
Sbjct: 505 ESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGAS 564
Query: 396 YIDEIISKIQPGVG----YSADAANHIYHLINKGQIDAAYRIVNTLA 438
E ++ ++ +S A H + +G++ AY + N +A
Sbjct: 565 KAKEFVADLENNCSVLNKFSLTALLHGF--CREGRLTEAYHVWNEMA 609
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 137/325 (42%), Gaps = 44/325 (13%)
Query: 72 VHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLI 131
+H+G L LD Y A +R Y + + +A+++ +G + + V Y LI
Sbjct: 189 LHSGVL---LDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYG---- 241
Query: 132 SKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
C++ + A + M + E L+YG + ++ A + M++ G
Sbjct: 242 --LCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFV 299
Query: 192 PSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASA 248
PS + ++ G K G ++ + ++ L+ +F ++ L N+ + + A
Sbjct: 300 PSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIF-AYNALLNNM--CKNGMFSEA 356
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHA 305
+ ++ MS GLEP+ TY L+ K G MD +L + G + Y +I+
Sbjct: 357 DRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINC 416
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS- 364
D++ + F++ M + GL P+A +Y+ ++ G + GD+
Sbjct: 417 CCKK------DDLDMAMGFLS---------EMVEIGLTPNAASYSPVIAGLCRKGDLSGA 461
Query: 365 --IRRLLAQNG--------SSLVNG 379
+ R +A+ G ++L+NG
Sbjct: 462 VELHRKMAEKGVAWNTYTFTALING 486
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 128/326 (39%), Gaps = 75/326 (23%)
Query: 101 SPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEG 160
S T F ++ GI PN+ TY + +I YC++G I+ A + E M + S
Sbjct: 495 SATSFFYEMLKCGISPNQWTY------TAMIDGYCKEGKIDVALSLFERMEENGCSASIE 548
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
+NA+I G S+ N + AE M++ GL+P+ TYT L+ G K+
Sbjct: 549 TYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKN------------- 595
Query: 221 KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
TNL A I M + P+A TYT L+ G + G +
Sbjct: 596 ------------TATNL----------AFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKV 633
Query: 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
D+ R L ++G Y ++ L G +E S +V M +
Sbjct: 634 DAAER-LTENGCEPTIDTYSTLVSGLCREGRS---NEASQLV------------ENMKEK 677
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGE--YID 398
GL PS + Y L+ + K +D L+I + +AV G +I
Sbjct: 678 GLSPSMEIYCSLLVAHCKSLKVDCA----------------LEIFNLMAVKGFQPHLFIY 721
Query: 399 EIISKIQPGVGYSADAANHIYHLINK 424
+++ GV + +A N L+ K
Sbjct: 722 KVLICALCGVSRAEEALNIFQSLLKK 747
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 146/369 (39%), Gaps = 58/369 (15%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K+ +G+ PN VTY + LI++ C +G A KI ++M + +N +I
Sbjct: 362 KMLKEGLVPNTVTY------NALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIK 415
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G +D+ A + M + G P+ TY L+ K G +++ + +K +
Sbjct: 416 GLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESN--- 472
Query: 228 LCFSFQLTNLLILV----SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD-- 281
C + T ++ + SA M + G+ P+ TYT ++ GY K G +D
Sbjct: 473 -CEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVA 531
Query: 282 -SVRRLLAQSGSSLVNGDYLDIIHALA--------------VSGHGEYIDEVSAIVCFVN 326
S+ + ++G S Y II L+ ++ G + ++
Sbjct: 532 LSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLING 591
Query: 327 IC-----------FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
+C FH +E + P+A TYT L+ G + G +D+ R L +NG
Sbjct: 592 LCKNTATNLAFKIFHEME-----KKNCLPNAHTYTSLIYGLCQEGKVDAAER-LTENGCE 645
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKI-QPGVG-----YSADAANHIYHLINKGQIDA 429
Y ++ L G +++ + + G+ Y + H L ++D
Sbjct: 646 PTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSL----KVDC 701
Query: 430 AYRIVNTLA 438
A I N +A
Sbjct: 702 ALEIFNLMA 710
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 169/447 (37%), Gaps = 61/447 (13%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+ D+ D Y +L+ + N + ++ G PN VTY S LI+ C
Sbjct: 225 QFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTY------STLINGLC 278
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+G I A +LE M +K + + I + A ++ M + G PS Q
Sbjct: 279 NEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQ 338
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMAS 247
TYT ++ G + G M+ K L P + + N LI
Sbjct: 339 TYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTY--------NALINELCTEGRFGI 390
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII--HA 305
A I M G +AQTY +++ G MD + + + L +G ++ +
Sbjct: 391 ALKIFDWMEGHGTLANAQTYNQIIKGLF---GMDDIEKAMVVFNKMLKDGPSPTVVTYNT 447
Query: 306 LAVSGHGE-YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
L V Y++ + + MM ++ EP +TY +L+ G+ K G +DS
Sbjct: 448 LIVENLKRGYLNNATRFL------------YMMKESNCEPDERTYCELISGFCKGGKLDS 495
Query: 365 IRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQP-GVGYSADAANHIYH 420
+ + G S Y +I G + + +++ G S + N I
Sbjct: 496 ATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIIS 555
Query: 421 LINKG-QIDAAYRIV----------NTLARSANINGEQLPVG---GFLVRH-MVKTNQPG 465
++KG + A + NT+ ++ ING F + H M K N
Sbjct: 556 GLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLP 615
Query: 466 VGYSADAANHIYHLINKGQIDAAYRIV 492
++ + IY L +G++DAA R+
Sbjct: 616 NAHTYTSL--IYGLCQEGKVDAAERLT 640
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 90/199 (45%), Gaps = 26/199 (13%)
Query: 83 ISHYNALLRVYLDNEHTFSPTD-FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
I YNA++ L + FS + F AK+ QG++PN +TY + LI+ C++
Sbjct: 547 IETYNAIISG-LSKGNRFSEAEKFCAKMTEQGLQPNTITY------TSLINGLCKNTATN 599
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A KI M K + + +LIYG Q + +AE +++ G EP+ TY+ L+
Sbjct: 600 LAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAE----RLTENGCEPTIDTYSTLV 655
Query: 202 CGYAKHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLLI--LVSSDMASAEGILTM 254
G + G + + ++K P E++ +LL+ S + A I +
Sbjct: 656 SGLCREGRSNEASQLVENMKEKGLSPSMEIY-------CSLLVAHCKSLKVDCALEIFNL 708
Query: 255 MSQAGLEPSAQTYTKLMCG 273
M+ G +P Y L+C
Sbjct: 709 MAVKGFQPHLFIYKVLICA 727
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 122/299 (40%), Gaps = 31/299 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N LL + S + A++ S G++P+ +T+ + +I+ C+ G ++ A
Sbjct: 165 FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTF------NTMINILCKKGKVQEA-- 216
Query: 146 ILEFMRDKTFPISEGVFN--ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+L F + F + F +LI GH + + A + M + G P++ TY+ L+ G
Sbjct: 217 VLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLING 276
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
G + + + + +++ + + + A ++ M + G PS
Sbjct: 277 LCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPS 336
Query: 264 AQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
QTYT ++ G + G M+ + + + G Y +I+ L G ++
Sbjct: 337 VQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKI-- 394
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG 379
F W+EG G +AQTY +++ G MD I + + L +G
Sbjct: 395 --------FDWMEG-----HGTLANAQTYNQIIKGLF---GMDDIEKAMVVFNKMLKDG 437
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 113/282 (40%), Gaps = 59/282 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ L+ Y N +T + +++ QGI + VTY LIS C +G +E K
Sbjct: 267 FGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISG------LCSEGKVEEGVK 320
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
++E M D +E F ++ G + MA A + M++ +EP YT L+ GY
Sbjct: 321 LMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYR 380
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G M+ A + M++ G+ P+
Sbjct: 381 RLGKME-----------------------------------DAMAVKEAMAKKGISPNVT 405
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIV 322
TY L+ G+++ GD S LL + + D Y +I AL G EV V
Sbjct: 406 TYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG------EVRKAV 459
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
++ MS+ GLEP+ TY ++ G+ G++ S
Sbjct: 460 KLLD---------EMSEVGLEPNHLTYNTIIQGFCDKGNIKS 492
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 136/318 (42%), Gaps = 32/318 (10%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ---ANDMASAEGILTMMS 186
+IS C+ G + A + + ++ S +N+LI G+ + A +M + +L M
Sbjct: 197 VISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV 256
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
+AG+ P+A T+ L+ GY K+ + + +K Q ++ +L+ + S+
Sbjct: 257 EAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYN--SLISGLCSEGK 314
Query: 247 SAEGILTM--MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
EG+ M M GL P+ T+ ++ G+ K G M + V D +I+
Sbjct: 315 VEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDV--VIY 372
Query: 305 ALAVSGH---GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+ + G+ G+ D ++ M++ G+ P+ TY L+ G+++ GD
Sbjct: 373 TILIDGYRRLGKMEDAMAV-------------KEAMAKKGISPNVTTYNCLITGFSRSGD 419
Query: 362 MDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH- 417
S LL + + D Y +I AL G +++ ++ VG + +
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE-VGLEPNHLTYN 478
Query: 418 --IYHLINKGQIDAAYRI 433
I +KG I +AY I
Sbjct: 479 TIIQGFCDKGNIKSAYEI 496
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 123/286 (43%), Gaps = 22/286 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
FN +I G + + A + + GL PS TY L+ GY K G ++ LK
Sbjct: 194 FNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLK 253
Query: 222 PQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
E + + +LI +S+ A+A + M Q G+ S TY L+ G G
Sbjct: 254 EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313
Query: 279 DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
++ +L+ + ++ + +I + G + ++ N W++G M+
Sbjct: 314 KVEEGVKLMEEMEDLGLSPN--EITFGCVLKGFCK-----KGMMADAN---DWIDG--MT 361
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGE 395
+ +EP YT L+ GY + G M+ +++ +A+ G S Y +I + SG
Sbjct: 362 ERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWR 421
Query: 396 YIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
++ +++ G AD + I L KG++ A ++++ ++
Sbjct: 422 SASGLLDEMKEK-GIEADVVTYNVLIGALCCKGEVRKAVKLLDEMS 466
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 76 ELDVPLDISHYNALLRVYL---DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
E +V D+ Y L+ Y E + + +AK +GI PN TY LI+
Sbjct: 362 ERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAK---KGISPNVTTYNCLITG----- 413
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ + G+ A+ +L+ M++K +N LI ++ A +L MS+ GLEP
Sbjct: 414 -FSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472
Query: 193 SAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQS-----ELFLCFSFQLTNLLILVSSD 244
+ TY ++ G+ G++ S I+T++ + ++ +F+ + Q+
Sbjct: 473 NHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQI--------GK 524
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
M A +L M L P+ TY + G + G +R
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIR 564
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 138/328 (42%), Gaps = 33/328 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ Y F L ++ ++ I PN +T+ LI +C+D N+ A K
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG------FCRDENVTAAKK 320
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M+ + + +N+LI G + A G+ MS GL+P+ TY L+ G+
Sbjct: 321 VFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFC 380
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQAGLEP 262
K + + + + + +F N LI + M A + +MM G+ P
Sbjct: 381 KKKMLKEAREMLDDIGKRGLAPNVITF---NTLIDAYGKAGRMDDAFLLRSMMLDTGVCP 437
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVS 319
+ TY L+ G+ + G++ R+L + + + D Y ++ AL G E
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKG------ETR 491
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSL 376
V ++ F + GL PS TY L+ GY + G+ + +R L+ + G
Sbjct: 492 KAVRLLDEMF---------EVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRA 542
Query: 377 VNGDYLDIIHALAVSGHGEYIDEIISKI 404
Y +I G E + +++++
Sbjct: 543 NIVTYNVLIKGFCNKGKLEEANRLLNEM 570
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 155/399 (38%), Gaps = 85/399 (21%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D + +++ G P+ +TY +I YC+ G + A +L+ M K +E FN
Sbjct: 250 DVVEDMKAWGFSPSVITYNTIIDG------YCKAGKMFKADALLKEMVAKRIHPNEITFN 303
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
LI G + ++ +A+ + M + GL+P+ TY L+ G +G +D
Sbjct: 304 ILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD------------ 351
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
A G+ MS GL+P+ TY L+ G+ K +
Sbjct: 352 -----------------------EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEA 388
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
R +L G + + + + G +D+ +L MM G+
Sbjct: 389 REMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA------------FLLRSMMLDTGVC 436
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEI 400
P+ TY L+ G+ + G++ R+L + + + D Y ++ AL G +
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496
Query: 401 ISKI-QPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMV 459
+ ++ + G+ S HL ID +R N+ +A +N V
Sbjct: 497 LDEMFEVGLNPS--------HLTYNALIDGYFREGNS---TAALN--------------V 531
Query: 460 KTNQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 495
+T G A+ + I NKG+++ A R++N +
Sbjct: 532 RTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEM 570
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 67 EDPFSVHTGELDVPL--DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL 124
+D F + + LD + ++S YN L+ + + ++E G++ + VTY
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTY--- 477
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
+ L+ C+ G A ++L+ M + S +NALI G+ + + +A + T+
Sbjct: 478 ---NILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTL 534
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMD 211
M + G + TY L+ G+ G ++
Sbjct: 535 MEKKGRRANIVTYNVLIKGFCNKGKLE 561
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 6/116 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ T L ++ G+ P+ +TY LI Y ++GN
Sbjct: 473 DLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDG------YFREGNST 526
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
A + M K + +N LI G + A +L M + GL P+ TY
Sbjct: 527 AALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTY 582
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 136/333 (40%), Gaps = 51/333 (15%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
E V +I YNAL+ + ++ G+ PN VTY S LI
Sbjct: 357 RVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTY------SILID 410
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C+ G ++ A L M D S +N+LI GH + D+++AE ++ M LEP
Sbjct: 411 MFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEP 470
Query: 193 SAQTYTKLMCGYAKHGDMDSI---------KTKIPSLKPQSELFLCFSFQLTNLL--ILV 241
+ TYT LM GY G ++ K +PS+ + T LL +
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSI-----------YTFTTLLSGLFR 519
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD--- 298
+ + A + T M++ ++P+ TY ++ GY + G+M L + + D
Sbjct: 520 AGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYS 579
Query: 299 YLDIIHALAVSGHGE----YIDEVSAIVCFVN-ICFHWL------EGPM---------MS 338
Y +IH L ++G ++D + C +N IC+ L EG + M
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMG 639
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
G++ Y L+ G KH D LL +
Sbjct: 640 LRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKE 672
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 113/296 (38%), Gaps = 41/296 (13%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
++ ++PNRVTY +I YC++GN+ A + L M +K +
Sbjct: 529 LFTEMAEWNVKPNRVTYNVMIEG------YCEEGNMSKAFEFLNEMIEKGIVPDTYSYRP 582
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIP--SLKP 222
LI+G + A+ + + + E + YT L+ G+ + G ++ + L+
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRG 642
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD- 281
+C+ + L D G+L M GL+P YT ++ +K GD
Sbjct: 643 VDLDLVCYGVLIDG--SLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 282 --SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV----------------C 323
+ L+ G Y +I+ L +G +++E + C
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAG---FVNEAEILCSKMRPGNSVPNQVTYGC 757
Query: 324 FVNICFHWLEGPMMSQA--------GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
F++I + G M GL + TY L+ G+ + G M+ L+ +
Sbjct: 758 FLDILTKGV-GDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITR 812
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+R + ++ + ++ G+ P+ +TY + +IS+ C+ +++ A +
Sbjct: 790 YNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITY------TTMISELCRRNDVKKAIE 843
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+ M +K +N LI+G A +M A + M + GL+P+ +T
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTET 894
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 69/356 (19%), Positives = 131/356 (36%), Gaps = 86/356 (24%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI---------S 126
E +V + YN ++ Y + + +FL ++ +GI P+ +Y+ LI S
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 127 NSK--------------------LISKYCQDGNIEGATKI-------------------- 146
+K L+ +C++G +E A +
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLI 654
Query: 147 ---------------LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
L+ M D+ + ++ ++I S+ D A GI +M G
Sbjct: 655 DGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL-----FLCFSFQLTNLLILVSSDMA 246
P+ TYT ++ G K G ++ + ++P + + + CF ++L DM
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCF----LDILTKGVGDMK 770
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
A + + + GL + TY L+ G+ + G M+ L+ + V+ D I +
Sbjct: 771 KAVELHNAILK-GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDC--ITYTT 827
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+S D AI + + M++ G+ P Y L+ G G+M
Sbjct: 828 MISELCRRNDVKKAIELWNS----------MTEKGIRPDRVAYNTLIHGCCVAGEM 873
>gi|357487731|ref|XP_003614153.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515488|gb|AES97111.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 691
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 34/292 (11%)
Query: 107 AKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
+++E +GI N + Y + L+ YC+ +E A + M+ K + FN L+
Sbjct: 343 SEMEKKGISSNAIVY------NTLMDAYCKSNRVEEAEGLFVEMKAKGIKPTAVTFNILM 396
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS------IKTKIPSL 220
Y +S+ E +L M GL+P+A +YT L+ Y + M +K K +
Sbjct: 397 YAYSRRMQPKIVESLLAEMKDFGLKPNANSYTCLISAYGRQKKMSDMAADAFLKMKKVGI 456
Query: 221 KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
KP S + + VS A + M + G++PS +TYT L+ + + GD
Sbjct: 457 KPTSHSYTAMIHAYS-----VSGWHEKAYAVFENMIREGIKPSIETYTTLLDAFRRVGDT 511
Query: 281 DSVRRLLAQSGSSLVNGDYLDI-IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+++ ++ S V G + I + G +++ I F I
Sbjct: 512 ETLMKIWKLMMSEKVKGTQVTFNILVDGFAKQGLFMEARDVISEFGKI------------ 559
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHAL 388
GL+P+ TY L+ YA+ G +I +LL + + + D Y +I+A
Sbjct: 560 -GLQPTVMTYNMLINAYARGGLDSNIPQLLKEMEALRLRPDSITYSTVIYAF 610
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 114/279 (40%), Gaps = 60/279 (21%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F K+ +G+ + + LI + +C +G + A I M K + V+N
Sbjct: 306 FFEKMNQKGVRWGKEAFGALIKS------FCVEGLLSEALIIQSEMEKKGISSNAIVYNT 359
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
L+ + ++N + AEG+ M G++P+A T+ LM Y++ ++ KI
Sbjct: 360 LMDAYCKSNRVEEAEGLFVEMKAKGIKPTAVTFNILMYAYSRR-----MQPKI------- 407
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
E +L M GL+P+A +YT L+ Y + M +
Sbjct: 408 -----------------------VESLLAEMKDFGLKPNANSYTCLISAYGRQKKMSDMA 444
Query: 285 R----LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
+ + G + Y +IHA +VSG E A F N M +
Sbjct: 445 ADAFLKMKKVGIKPTSHSYTAMIHAYSVSGWHE-----KAYAVFEN----------MIRE 489
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG 379
G++PS +TYT L+ + + GD +++ ++ S V G
Sbjct: 490 GIKPSIETYTTLLDAFRRVGDTETLMKIWKLMMSEKVKG 528
>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
Length = 410
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 115/293 (39%), Gaps = 41/293 (13%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI-------------------- 125
Y AL+ Y + ++ G+EPN TY LI
Sbjct: 76 YTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP 135
Query: 126 ---------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
S + LI+ C+ G + A K+L+ MR + S FN L+ G+ +A M+
Sbjct: 136 VRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMS 195
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236
+A M AG +PSA TY L+ G+ + DM + +K + ++ +
Sbjct: 196 NALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILI 255
Query: 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN 296
+ M A IL M +AGLE A TY L+ G+M R+L G V
Sbjct: 256 DSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVE 315
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY 349
++I+ + + G+G A+ + M Q GL P++ +Y
Sbjct: 316 PS--NVIYDMMIYGYGREGSSYKALKLIME----------MRQKGLIPNSASY 356
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 122/307 (39%), Gaps = 31/307 (10%)
Query: 126 SNSKLISKYCQDGNIEGATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
+ + + + C G++ A +L + + AL+ G + D+A A +
Sbjct: 4 TTAAAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDE 63
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDS-----IKTKIPSLKPQSELFLCFSFQLTNLLI 239
M GL P+ TYT LM GY HG + + + ++P + C +
Sbjct: 64 MPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCR--- 120
Query: 240 LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDY 299
+ + A + M G+ + +Y L+ G +HG + +LL + G
Sbjct: 121 --TGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRT---EGTR 175
Query: 300 LDII-HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
II L V G+G+ ++S + F N M AG +PSA TY L+ G+ +
Sbjct: 176 PSIITFNLLVDGYGK-AGKMSNALPFFN---------QMKAAGFQPSAVTYNMLIAGFCR 225
Query: 359 HGDMDSIRRLLA---QNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA 415
DM R L+ + G Y +I + A H EI++ ++ G DA
Sbjct: 226 ARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK-AGLEVDA- 283
Query: 416 NHIYHLI 422
H Y ++
Sbjct: 284 -HTYGVL 289
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 6/178 (3%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + L+ ++ +G+EP +VTY + LI + ++ ++ A +
Sbjct: 216 YNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTY------TILIDSFARENHMGKAFE 269
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
IL M + + L+ +M A + M + G+EPS Y ++ GY
Sbjct: 270 ILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYG 329
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
+ G I ++ + + S+ LT ++ AE +L M +AGL+ S
Sbjct: 330 REGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTS 387
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 84.0 bits (206), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 136/364 (37%), Gaps = 72/364 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN ++ + +FL+++ +GI PN VTY S ++ +C G ++
Sbjct: 372 DVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTY------STILHGFCNLGQLD 425
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
AT++ + M + + F+ L+ G Q ++ A + M++ G+EP+ TY LM
Sbjct: 426 EATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALM 485
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY + M A + +M G
Sbjct: 486 NGYC-----------------------------------LRCKMNEARKVFEIMVGKGCA 510
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
P +Y L+ GY MD + LL Q + + Y I+ L G E+
Sbjct: 511 PDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQEL 570
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
+C +G+ P+ TY+ L+ G KHG +D +L +
Sbjct: 571 FKKMC---------------SSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLE 615
Query: 379 GD---YLDIIHALAVSGHGEYIDEIISKIQ------PGVGYSADAANHIYHLINKGQIDA 429
D Y +I + + G E + SK+ PG Y+ I L+ +G D
Sbjct: 616 PDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNV----MIKGLLKEGLSDE 671
Query: 430 AYRI 433
AY +
Sbjct: 672 AYEL 675
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 12/217 (5%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E V +I YNAL+ Y + +G P+ +Y LI+ YC
Sbjct: 471 EKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILING------YC 524
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
++ A +L M K + +N ++ G + A+ + M +G+ P+
Sbjct: 525 NSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLM 584
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGIL 252
TY+ L+ G KHG +D S+K + L L +LI + + A+G+
Sbjct: 585 TYSILLNGLCKHGHLDEALKLFKSMKEKK---LEPDIILYTILIEGMFIGGKLEVAKGLF 641
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ +S G++P +TY ++ G K G D L +
Sbjct: 642 SKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 109/297 (36%), Gaps = 67/297 (22%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ ++ +T K+E G +PN VTY +I + C+D +
Sbjct: 197 DVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDS------LCKDRLVN 250
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A L M + P +N++++G + A + M Q G +P TY +
Sbjct: 251 DAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNII- 309
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+DS+ + +L N A L+ M G+
Sbjct: 310 --------IDSL----------------YKDRLVN----------DAADFLSEMVDQGIP 335
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALA----VSGHGEY 314
P TYT ++ G G ++ RL + Q G Y II +L V+ E+
Sbjct: 336 PDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEF 395
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ E M G+ P+A TY+ ++ G+ G +D +L +
Sbjct: 396 LSE-------------------MVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKE 433
>gi|387219245|gb|AFJ69331.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 521
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 151/350 (43%), Gaps = 48/350 (13%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D+ D+ ++ +++VY D L L ++G+ P+ VTY + L+ Y
Sbjct: 188 DLSPDLPTFHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTY------TTLMHAYAGR 241
Query: 138 GNIEGATKILEFM---------RDKTFPISEGV--FNALIYGHSQANDMASAEGILTMMS 186
G+ EGA +L M ++ + V + L+ ++ D+ +E +L M
Sbjct: 242 GDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERME 301
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILV 241
+A + P+ TYT LM Y GD+ + + + P + + T V
Sbjct: 302 EACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYTTLLHAYT-----V 356
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL- 300
+ + A AE +L M AG+ P+A T+ LM YA G+++S + +LA+ ++ V +
Sbjct: 357 NGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMA 416
Query: 301 --DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+++A V+G ++ V + + P+ TY LM GYA
Sbjct: 417 FDTLLNAYVVAGDVGGAEQ----VLRRREAEAYPDFPL-----------TYNTLMNGYAD 461
Query: 359 HGDMDSIRRLLAQNGSSLVNGDYL---DIIHALAVSGHGEYIDEIISKIQ 405
GD+ +LA+ + V D ++HA A +G + ++ ++Q
Sbjct: 462 KGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGDPLGAEAVLLRVQ 511
>gi|422294672|gb|EKU21972.1| putative udp-glucosyltransferase, partial [Nannochloropsis gaditana
CCMP526]
Length = 535
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 151/350 (43%), Gaps = 48/350 (13%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D+ D+ ++ +++VY D L L ++G+ P+ VTY + L+ Y
Sbjct: 202 DLSPDLPTFHTVMKVYADERDPEGAEMVLGWLLARGLLPDVVTY------TTLMHAYAGR 255
Query: 138 GNIEGATKILEFM---------RDKTFPISEGV--FNALIYGHSQANDMASAEGILTMMS 186
G+ EGA +L M ++ + V + L+ ++ D+ +E +L M
Sbjct: 256 GDTEGAEAVLRRMLEGEGGRVREEEVLRVLPNVMTYTTLMTAYAAGGDVEGSEAVLERME 315
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILV 241
+A + P+ TYT LM Y GD+ + + + P + + T V
Sbjct: 316 EACIAPNVMTYTVLMTAYTLRGDVKGAEGVLRRMISAYVAPNANTYTTLLHAYT-----V 370
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL- 300
+ + A AE +L M AG+ P+A T+ LM YA G+++S + +LA+ ++ V +
Sbjct: 371 NGNAAGAEEVLARMEAAGVLPTALTFATLMTVYAARGEVESAKGVLARMEAAGVGPTAMA 430
Query: 301 --DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+++A V+G ++ V + + P+ TY LM GYA
Sbjct: 431 FDTLLNAYVVAGDVGGAEQ----VLRRREAEAYPDFPL-----------TYNTLMNGYAD 475
Query: 359 HGDMDSIRRLLAQNGSSLVNGDYL---DIIHALAVSGHGEYIDEIISKIQ 405
GD+ +LA+ + V D ++HA A +G + ++ ++Q
Sbjct: 476 KGDVAGAEGVLARMRAKGVGPDETTLSTLLHAYAEAGDPLGAEAVLLRVQ 525
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 19/181 (10%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F+ K+E+ G+EPN VTY LI+ Y G++E A +L+FM +K + +
Sbjct: 248 FVKKMENLGVEPNIVTYHSLING------YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 301
Query: 165 LIYGHSQANDMASAEGILT-MMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSL 220
LI G+ + M AE +L M +A L P + Y L+ GY + G +D + ++ L
Sbjct: 302 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRL 361
Query: 221 KPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
++ LF+C N LI ++ AEG++T M L+P + +Y L+ GY +
Sbjct: 362 GLKTNLFIC------NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 415
Query: 278 G 278
G
Sbjct: 416 G 416
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 146/379 (38%), Gaps = 73/379 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-------------- 127
D YN LL Y HT + K+ +GIEP +TY L+
Sbjct: 401 DSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW 460
Query: 128 ---------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
S L+ + N EGA+ + + + + F S FN +I G +
Sbjct: 461 HLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 520
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTK-IPSLKPQSELFLCF 230
M AE I M G P TY L+ GY K ++ + K K +P S
Sbjct: 521 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP----- 575
Query: 231 SFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVR 284
S ++ N LI S + +LT M GL P+ TY L+ G+ K G +D S
Sbjct: 576 SIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSY 635
Query: 285 RLLAQSG--------SSLVNGDY----LDIIHAL--AVSGHGEYIDEVSAIVCFVNICFH 330
+ ++G S++V+G Y +D + L + HG + D CF+
Sbjct: 636 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH----ECFLKSDIR 691
Query: 331 WLEGPMMS-------QAGLEPSAQTYTKLMCGYAKHGDMDSIRR---LLAQNGSSLVNGD 380
+ ++ + L P+ Y + G K G +D RR +L+ G N
Sbjct: 692 YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFT 751
Query: 381 YLDIIHALAVSGHGEYIDE 399
Y +IH + +G+ +DE
Sbjct: 752 YCTLIHGYSAAGN---VDE 767
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 141/336 (41%), Gaps = 37/336 (11%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I YN+L+ + TD L ++ +G+ PN VTY LI +C++G ++
Sbjct: 577 IEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDG------WCKEGMLDK 630
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A M + + + + ++ G + + A ++ M G P + + K
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 690
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAG 259
YA +I+ SL + FL + + N+ I + + A +M+S G
Sbjct: 691 RYA------AIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 744
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
P TY L+ GY+ G++D RL + + G Y +I+ L S E +D
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKS---ENVD 801
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNG 373
+ FH L Q GL P+ TY L+ GY K G+MD+ +L + + G
Sbjct: 802 RAQRL-------FHKLH-----QKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849
Query: 374 SSLVNGDYLDIIHALAVSGHGEYIDEIISK-IQPGV 408
S Y +I+ L G E +++++ I+ GV
Sbjct: 850 ISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 44/217 (20%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F + L +G P+ TY LI Y GN++ A ++ + M + + +NA
Sbjct: 736 FFSMLSLKGFVPDNFTY------CTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 789
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
LI G ++ ++ A+ + + Q GL P+ TY L+ GY K G+MD+
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDA------------ 837
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+F+L + +I + G+ PS TY+ L+ G KHGD++
Sbjct: 838 ------AFKLKDKMI-----------------EEGISPSVVTYSALINGLCKHGDIERSM 874
Query: 285 RLLAQSGSSLVNG---DYLDIIHALAVSGHGEYIDEV 318
+LL Q + V+ +Y ++ SG + I ++
Sbjct: 875 KLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKL 911
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 125/296 (42%), Gaps = 32/296 (10%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N+LL + N T + ++ GI P+ + S +++ +C+DG ++ A
Sbjct: 195 NSLLNNLVKNGETHTAHYVYQQMIRVGIVPD------VFMVSIMVNAFCKDGKVDEAAGF 248
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
++ M + + +++LI G+ D+ +A+G+L MS+ G+ + TYT L+ GY K
Sbjct: 249 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 308
Query: 207 HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPS 263
MD + + + Q E L + +LI + + A +L M + GL+ +
Sbjct: 309 QCKMDEAEKVLRGM--QEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTN 366
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSA 320
L+ GY K G++ ++ + + D Y ++ GH
Sbjct: 367 LFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA----- 421
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNG 373
N+C M Q G+EP+ TY L+ G + G D I L+ + G
Sbjct: 422 ----FNLC------DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRG 467
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 7/135 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP +I YNAL+ +E+ KL +G+ PN VTY LI YC+ G
Sbjct: 781 VP-NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDG------YCKIG 833
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N++ A K+ + M ++ S ++ALI G + D+ + +L M +AG++ Y
Sbjct: 834 NMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYC 893
Query: 199 KLMCGYAKHGDMDSI 213
L+ GY + G+M I
Sbjct: 894 TLVQGYIRSGEMQKI 908
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 15/221 (6%)
Query: 153 KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 212
+ F S VF+ ++ + + +A + M + G PS ++ L+ K+G+ +
Sbjct: 150 REFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHT 209
Query: 213 IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
+ + F + + A G + M G+EP+ TY L+
Sbjct: 210 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 269
Query: 273 GYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY--IDEVSAIVCFVNICFH 330
GY GD+++ + +L V+ + + + L + G+ + +DE +
Sbjct: 270 GYVSLGDVEAAKGVLKFMSEKGVSRNV--VTYTLLIKGYCKQCKMDEAEKV--------- 318
Query: 331 WLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
L G M +A L P + Y L+ GY + G +D RLL +
Sbjct: 319 -LRG-MQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 19/181 (10%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F+ K+E+ G+EPN VTY LI+ Y G++E A +L+FM +K + +
Sbjct: 248 FVKKMENLGVEPNIVTYHSLING------YVSLGDVEAAKGVLKFMSEKGVSRNVVTYTL 301
Query: 165 LIYGHSQANDMASAEGILT-MMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSL 220
LI G+ + M AE +L M +A L P + Y L+ GY + G +D + ++ L
Sbjct: 302 LIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRL 361
Query: 221 KPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
++ LF+C N LI ++ AEG++T M L+P + +Y L+ GY +
Sbjct: 362 GLKTNLFIC------NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCRE 415
Query: 278 G 278
G
Sbjct: 416 G 416
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 141/372 (37%), Gaps = 68/372 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-------------- 127
D YN LL Y HT + K+ +GIEP +TY L+
Sbjct: 401 DSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW 460
Query: 128 ---------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
S L+ + N EGA+ + + + + F S FN +I G +
Sbjct: 461 HLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 520
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTKIPSLKPQSELFLCFS 231
M AE I M G P TY L+ GY K ++ + K K + S
Sbjct: 521 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVK----GAMEREXISPS 576
Query: 232 FQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRR 285
++ N LI S + +LT M GL P+ TY L+ G+ K G +D S
Sbjct: 577 IEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYF 636
Query: 286 LLAQSG--------SSLVNGDY----LDIIHAL--AVSGHGEYIDEVSAIVCFVNICFHW 331
+ ++G S++V+G Y +D + L + HG + D CF+ +
Sbjct: 637 EMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH----ECFLKSDIRY 692
Query: 332 LEGPMMS-------QAGLEPSAQTYTKLMCGYAKHGDMDSIRR---LLAQNGSSLVNGDY 381
++ + L P+ Y + G K G +D RR +L+ G N Y
Sbjct: 693 AAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTY 752
Query: 382 LDIIHALAVSGH 393
+IH + +G+
Sbjct: 753 CTLIHGYSAAGN 764
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 141/336 (41%), Gaps = 37/336 (11%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I YN+L+ + TD L ++ +G+ PN VTY LI +C++G ++
Sbjct: 577 IEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDG------WCKEGMLDK 630
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A M + + + + ++ G + + A ++ M G P + + K
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 690
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAG 259
YA +I+ SL + FL + + N+ I + + A +M+S G
Sbjct: 691 RYA------AIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 744
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
P TY L+ GY+ G++D RL + + G Y +I+ L S E +D
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKS---ENVD 801
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNG 373
+ FH L Q GL P+ TY L+ GY K G+MD+ +L + + G
Sbjct: 802 RAQRL-------FHKLH-----QKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849
Query: 374 SSLVNGDYLDIIHALAVSGHGEYIDEIISK-IQPGV 408
S Y +I+ L G E +++++ I+ GV
Sbjct: 850 ISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGV 885
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 120/283 (42%), Gaps = 29/283 (10%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N+LL + N T + ++ GI P+ + S +++ +C+DG ++ A
Sbjct: 195 NSLLNNLVKNGETHTAHYVYQQMIRVGIVPD------VFMVSIMVNAFCKDGKVDEAAGF 248
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
++ M + + +++LI G+ D+ +A+G+L MS+ G+ + TYT L+ GY K
Sbjct: 249 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 308
Query: 207 HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPS 263
MD + + + Q E L + +LI + + A +L M + GL+ +
Sbjct: 309 QCKMDEAEKVLRGM--QEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTN 366
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSA 320
L+ GY K G++ ++ + + D Y ++ GH
Sbjct: 367 LFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA----- 421
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
N+C M Q G+EP+ TY L+ G + G D
Sbjct: 422 ----FNLC------DKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP +I YNAL+ +E+ KL +G+ PN VTY LI YC+ G
Sbjct: 781 VP-NIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDG------YCKIG 833
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N++ A K+ + M ++ S ++ALI G + D+ + +L M +AG++ Y
Sbjct: 834 NMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYC 893
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ 233
L+ G K + + + +K +LK FL F+
Sbjct: 894 TLVQGGFKTSNYNEM-SKPEALKQNMNCFLLPKFK 927
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 15/221 (6%)
Query: 153 KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 212
+ F S VF+ ++ + + +A + M + G PS ++ L+ K+G+ +
Sbjct: 150 REFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHT 209
Query: 213 IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
+ + F + + A G + M G+EP+ TY L+
Sbjct: 210 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 269
Query: 273 GYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY--IDEVSAIVCFVNICFH 330
GY GD+++ + +L V+ + + + L + G+ + +DE +
Sbjct: 270 GYVSLGDVEAAKGVLKFMSEKGVSRNV--VTYTLLIKGYCKQCKMDEAEKV--------- 318
Query: 331 WLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
L G M +A L P + Y L+ GY + G +D RLL +
Sbjct: 319 -LRG-MQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D+ + ++ + + F+ K+E+ G+EPN VTY LI+ Y G
Sbjct: 189 VP-DVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLING------YVSLG 241
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT-MMSQAGLEPSAQTY 197
++E A +L+FM +K + + LI G+ + M AE +L M +A L P + Y
Sbjct: 242 DVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAY 301
Query: 198 TKLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGI 251
L+ GY + G +D + ++ L ++ LF+C N LI ++ AEG+
Sbjct: 302 GVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFIC------NSLINGYCKRGEIHEAEGV 355
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+T M L+P + +Y L+ GY + G
Sbjct: 356 ITRMVDWNLKPDSYSYNTLLDGYCREG 382
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 146/379 (38%), Gaps = 73/379 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-------------- 127
D YN LL Y HT + K+ +GIEP +TY L+
Sbjct: 367 DSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIW 426
Query: 128 ---------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
S L+ + N EGA+ + + + + F S FN +I G +
Sbjct: 427 HLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKM 486
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTK-IPSLKPQSELFLCF 230
M AE I M G P TY L+ GY K ++ + K K +P S
Sbjct: 487 GKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP----- 541
Query: 231 SFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVR 284
S ++ N LI S + +LT M GL P+ TY L+ G+ K G +D S
Sbjct: 542 SIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSY 601
Query: 285 RLLAQSG--------SSLVNGDY----LDIIHAL--AVSGHGEYIDEVSAIVCFVNICFH 330
+ ++G S++V+G Y +D + L + HG + D CF+
Sbjct: 602 FEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH----ECFLKSDIR 657
Query: 331 WLEGPMMS-------QAGLEPSAQTYTKLMCGYAKHGDMDSIRR---LLAQNGSSLVNGD 380
+ ++ + L P+ Y + G K G +D RR +L+ G N
Sbjct: 658 YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFT 717
Query: 381 YLDIIHALAVSGHGEYIDE 399
Y +IH + +G+ +DE
Sbjct: 718 YCTLIHGYSAAGN---VDE 733
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 33/292 (11%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I YN+L+ + TD L ++ +G+ PN VTY LI +C++G ++
Sbjct: 543 IEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTY------GALIDGWCKEGMLDK 596
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A M + + + + ++ G + + A ++ M G P + + K
Sbjct: 597 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 656
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAG 259
YA +I+ SL + FL + + N+ I + + A +M+S G
Sbjct: 657 RYA------AIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 710
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
P TY L+ GY+ G++D RL + + G Y +I+ L S E +D
Sbjct: 711 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKS---ENVD 767
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
+ FH L Q GL P+ TY L+ GY K G+MD+ +L
Sbjct: 768 RAQRL-------FHKLH-----QKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 807
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 120/283 (42%), Gaps = 29/283 (10%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N+LL + N T + ++ GI P+ + S +++ +C+DG ++ A
Sbjct: 161 NSLLNNLVKNGETHTAHYVYQQMIRVGIVPD------VFMVSIMVNAFCKDGKVDEAAGF 214
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
++ M + + +++LI G+ D+ +A+G+L MS+ G+ + TYT L+ GY K
Sbjct: 215 VKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCK 274
Query: 207 HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPS 263
MD + + + Q E L + +LI + + A +L M + GL+ +
Sbjct: 275 QCKMDEAEKVLRGM--QEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTN 332
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSA 320
L+ GY K G++ ++ + + D Y ++ GH
Sbjct: 333 LFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEA----- 387
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
N+C M Q G+EP+ TY L+ G + G D
Sbjct: 388 ----FNLC------DKMLQEGIEPTVLTYNTLLKGLCRVGAFD 420
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 15/221 (6%)
Query: 153 KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 212
+ F S VF+ ++ + + +A + M + G PS ++ L+ K+G+ +
Sbjct: 116 REFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHT 175
Query: 213 IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
+ + F + + A G + M G+EP+ TY L+
Sbjct: 176 AHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLIN 235
Query: 273 GYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY--IDEVSAIVCFVNICFH 330
GY GD+++ + +L V+ + + + L + G+ + +DE +
Sbjct: 236 GYVSLGDVEAAKGVLKFMSEKGVSRNV--VTYTLLIKGYCKQCKMDEAEKV--------- 284
Query: 331 WLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
L G M +A L P + Y L+ GY + G +D RLL +
Sbjct: 285 -LRG-MQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 323
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 200/486 (41%), Gaps = 62/486 (12%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL+++E GI + VTY + LI YC++G +E A +I+ M DK S +NA
Sbjct: 140 FLSEMEGNGIYADMVTY------NTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNA 193
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+I G + A A+GIL M GL P TY L+ + + K + Q
Sbjct: 194 IINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQG 253
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTM--MSQAGLEPSAQTYTKLMCGYAKHGDM-- 280
+ SF ++L+ + S + + ++ M + GL P YT LM GY ++G+M
Sbjct: 254 VVPDLVSF--SSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLE 311
Query: 281 -DSVRRLLAQSGSSLVNGDYLDIIHALA----VSGHGEYIDEV---SAIVCFVN----IC 328
+R + + G L Y I++ L ++ + DE+ A+ F I
Sbjct: 312 ALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIH 371
Query: 329 FHWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG 379
H +G M M+Q ++P Y L+ G+ K G+M + S L +G
Sbjct: 372 GHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEM--------EKASELWDG 423
Query: 380 DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLAR 439
+I H Y I+ VG+ ++A +I KG I NT+ +
Sbjct: 424 ----MISRKIFPNHITY--GILINAYCSVGHVSEAFRLWDVMIEKG-IKPTLVTCNTVIK 476
Query: 440 SANINGEQLPVGGFLVRHMVKTNQPG-VGYSADAANHIYHLINKGQIDAAYRIVNTLARS 498
+G+ FL R + K P + Y+ I + + +D A+ +N + +
Sbjct: 477 GYCRSGDSSKADEFLGRMIAKGVAPDHISYNT----LINGFVREDNMDKAFLWINKMEKE 532
Query: 499 A---NINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLK 555
+I + + GF + ++ + V ++ ++ ++P LI HV +
Sbjct: 533 GLLPDIITYNVVMNGFCRQGRMQEAE------LVLRKMIEKGINPDRSTYTALINGHVTQ 586
Query: 556 EDYTGA 561
++ A
Sbjct: 587 DNLNEA 592
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 138/341 (40%), Gaps = 62/341 (18%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D+ +++L+ V+ N H + ++ G+ P+ V Y + L+ YC++G
Sbjct: 255 VP-DLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY------TVLMHGYCRNG 307
Query: 139 NIEGATKILEFM---------------------------RDKTFP--ISEG------VFN 163
N+ A KI + M DK F + G F
Sbjct: 308 NMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFT 367
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
LI+GH Q +M A + M+Q ++P Y L+ G+ K G+M+ + +
Sbjct: 368 TLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISR 427
Query: 224 SELFLCFSFQLTNLLILVS----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
F +T +++ + ++ A + +M + G++P+ T ++ GY + GD
Sbjct: 428 K----IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGD 483
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
L + + V D+ I + ++G ++ E + ++ F W+ M +
Sbjct: 484 SSKADEFLGRMIAKGVAPDH--ISYNTLING---FVREDN-----MDKAFLWINK--MEK 531
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD 380
GL P TY +M G+ + G M +L + +N D
Sbjct: 532 EGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPD 572
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 101/268 (37%), Gaps = 47/268 (17%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI Y Q + T+ +R K + +S N+L+ G + + + A + + ++G
Sbjct: 54 LIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSG 113
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS-----------------ELFLCFSF 232
+E + T ++ K G D +K+ + ++ E L +F
Sbjct: 114 IELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAF 173
Query: 233 QLTNLL------------------ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
++ N + + A A+GIL M GL P TY L+
Sbjct: 174 EIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVES 233
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
+ + + + + V D + +AV ++D+ A+V F +
Sbjct: 234 CRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQ--ALVYFRD-------- 283
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
M + GL P YT LM GY ++G+M
Sbjct: 284 --MKKFGLVPDNVIYTVLMHGYCRNGNM 309
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 6/107 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ ++ ++ ++ K+E +G+ P+ +TY +++ +C+ G ++ A
Sbjct: 506 YNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNG------FCRQGRMQEAEL 559
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+L M +K + ALI GH +++ A M Q G P
Sbjct: 560 VLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAP 606
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 126/287 (43%), Gaps = 28/287 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN L+ + L +E+ + P TY + ++ Y + GNI+
Sbjct: 261 DIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETY------TSILDGYVKGGNIQ 314
Query: 142 GATKILEFMRDKTFPISEGV--FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
A ++ F R KT + GV +N+L+ G ++A M +A +L M G+ P+ ++YT
Sbjct: 315 KALEV--FDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTA 372
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L GYA+ GD++ +K ++ ++ S M A + ++ AG
Sbjct: 373 LTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAG 432
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYID 316
L+ + TY ++ G+A+ G++ R LL + G L Y I A SG E +
Sbjct: 433 LKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVT 492
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
E A+ M + LE +A+TYT L+ G+ D D
Sbjct: 493 ETLAV---------------MREKKLEVNARTYTTLIHGWLAAADPD 524
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 145/330 (43%), Gaps = 41/330 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +++++ + D L +++ G+ PN++ Y ++ Y + G+ A K
Sbjct: 195 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDG------YARGGDFTAAFK 248
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M ++N L++ +A M A G+L + L P+ +TYT ++ GY
Sbjct: 249 VWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYV 308
Query: 206 KHGDM-------DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
K G++ D IKT L+P + ++ L+ L + M +A +L M
Sbjct: 309 KGGNIQKALEVFDRIKT--AGLRPG---VVSYNSLLSGLA--KARQMENARLMLNEMLAN 361
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
G+ P+ ++YT L GYA+ GD++ + + + D Y ++ A SG +
Sbjct: 362 GVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRA 421
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL---AQN 372
EV F I + AGL+ + TY ++ G+A+ G++ R LL ++
Sbjct: 422 AEV-----FQQI----------TDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKH 466
Query: 373 GSSLVNGDYLDIIHALAVSGHGEYIDEIIS 402
G L Y I A SG E + E ++
Sbjct: 467 GFHLDTICYTSFIKACFRSGDTEEVTETLA 496
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 130/324 (40%), Gaps = 67/324 (20%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ L+ + + +++ Y + + + K +++ + P + Y + ++ YCQ G
Sbjct: 83 IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVY------NSIVQAYCQAG 136
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+E +L M ++ F + G++ ++ G ++ D + GL P+A TY
Sbjct: 137 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYG 196
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
++ + K G +MA A IL M +
Sbjct: 197 CIVKLFTKAG-----------------------------------NMAKALDILEEMDKH 221
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE-- 313
G+ P+ Y +M GYA+ GD + ++ S+ + D Y ++HA +G +
Sbjct: 222 GVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKA 281
Query: 314 --YIDEVSA------IVCFVNICFHWLEGPMMSQ----------AGLEPSAQTYTKLMCG 355
++ + A I + +I +++G + + AGL P +Y L+ G
Sbjct: 282 LGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSG 341
Query: 356 YAKHGDMDSIRRLLAQNGSSLVNG 379
AK M++ R +L + L NG
Sbjct: 342 LAKARQMENARLMLNE---MLANG 362
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 110/271 (40%), Gaps = 23/271 (8%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ Y + G+ A E MR + ++ +LI+ +++A DM A M G
Sbjct: 23 LVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQG 82
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
++ + + ++ GYA G+ ++ + K ++ + + + +M + E
Sbjct: 83 IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVE 142
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHAL 306
+L M + G + + YT ++ G+A+ D + S L G S Y I+
Sbjct: 143 ALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLF 202
Query: 307 AVSGH-GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
+G+ + +D + M + G+ P+ Y +M GYA+ GD +
Sbjct: 203 TKAGNMAKALDILEE----------------MDKHGVSPNKMIYAMIMDGYARGGDFTAA 246
Query: 366 RRLLAQNGSSLVNGD---YLDIIHALAVSGH 393
++ S+ + D Y ++HA +G
Sbjct: 247 FKVWEDMVSAGLKPDIVIYNILVHAFCKAGR 277
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 14/179 (7%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
++ +DI Y ALL+ + + ++ G++ NR+TY ++ + +
Sbjct: 397 NLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNRITY------CTMLDGWARK 450
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G + A +L M+ F + + + I ++ D L +M + LE +A+TY
Sbjct: 451 GELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTY 510
Query: 198 TKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
T L+ G+ D D + K L+ S L C L+ L+ S + E I
Sbjct: 511 TTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCL---LSGLISCASQNSTLGEKI 566
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 26/208 (12%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+ L+ +++ D +A M + ++P+ YT L+ YA+ DM+ +
Sbjct: 20 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 79
Query: 222 PQSELFLCFSFQLTNLLIL-VSSDMAS------AEGILTMMSQAGLEPSAQTYTKLMCGY 274
Q QL + + S AS AE L P Y ++ Y
Sbjct: 80 SQ-------GIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAY 132
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
+ G+M++V LLAQ G+ ++ ++G E DE + FH L+
Sbjct: 133 CQAGNMETVEALLAQMEEEGFQGNLG--LYTTVLNGFAEIRDEEKCLS-----FFHRLKA 185
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
GL P+A TY ++ + K G+M
Sbjct: 186 -----CGLSPTAATYGCIVKLFTKAGNM 208
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 44/233 (18%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP DI YN L+ Y E ++ +++++ G++PN VTY S LI +C++G
Sbjct: 356 VP-DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTY------STLIDAFCKEG 408
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++GA K+ MR +E + +LI + +A ++ A +L M QAG++ + TYT
Sbjct: 409 MMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYT 468
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G K G M AE + M +
Sbjct: 469 ALLDGLCKAG-----------------------------------RMIEAEEVFRSMLKD 493
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
G+ P+ Q YT L+ GY K M+ ++L Q + D I++ + GH
Sbjct: 494 GISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL--ILYGSIIWGH 544
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 116/299 (38%), Gaps = 40/299 (13%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F + GI P+ TY + +I C++G++E + ++ MR+ +N+
Sbjct: 276 FFNDMIGAGIAPSVFTY------NVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNS 329
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPS 219
LI G+ + + + M G P TY L+ Y K M + K
Sbjct: 330 LIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNG 389
Query: 220 LKPQSELFLCFSFQLTNLLILVSSD--MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
LKP + + L+ + M A + M + GL P+ TYT L+ K
Sbjct: 390 LKPNVVTY-------STLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKA 442
Query: 278 GDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
G++ +LL Q+G L Y ++ L +G +EV
Sbjct: 443 GNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFR-------------- 488
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
M + G+ P+ Q YT L+ GY K M+ ++L Q + D I++ + GH
Sbjct: 489 -SMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL--ILYGSIIWGH 544
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 105/271 (38%), Gaps = 35/271 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ + + GN + K M S +N +I + D+ ++ + M + G
Sbjct: 260 LLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMG 319
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKT---------KIPSLKPQSELFLCF-SFQLTNLLI 239
L P TY L+ GY K G ++ + + +P + + L C+ F+
Sbjct: 320 LSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFE------ 373
Query: 240 LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDY 299
M A + M GL+P+ TY+ L+ + K G M +L +
Sbjct: 374 ----KMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKL------------F 417
Query: 300 LDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
+D+ + Y + A N+ W M QAG++ + TYT L+ G K
Sbjct: 418 VDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKA 477
Query: 360 GDM---DSIRRLLAQNGSSLVNGDYLDIIHA 387
G M + + R + ++G S Y ++H
Sbjct: 478 GRMIEAEEVFRSMLKDGISPNQQVYTALVHG 508
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 116/300 (38%), Gaps = 32/300 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V L+I Y ALL + + GI PN+ Y + L+ Y +
Sbjct: 460 VKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVY------TALVHGYIKAE 513
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A KIL+ M + ++ ++I+GH + + IL M G+ + T
Sbjct: 514 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 573
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---- 254
++ Y K G ++ + T + V D GI+ +
Sbjct: 574 TIIDAYFKAGKSSDALNFFQEMQD-------VGVEATIVTYCVLIDGLCKAGIVELAVDY 626
Query: 255 ---MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
M GL+P+ YT L+ G K+ ++S ++L + + D + AL + G+
Sbjct: 627 FCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPD-ITAFTAL-IDGN 684
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
++ + A+V M++ +E YT L+ G+++ G++ R+ +
Sbjct: 685 LKHGNLQEALVLI----------SRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNE 734
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 32/340 (9%)
Query: 130 LISKYCQDGNIEGATKILEFMRD-KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
L S + + G +E A + MR+ +T P + N L++ S++ + M A
Sbjct: 225 LFSVFVELGLLEEANECFSRMRNFRTLPKARSC-NFLLHRLSKSGNGQLVRKFFNDMIGA 283
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASA 248
G+ PS TY ++ K GD+++ + ++ E+ L N LI + S
Sbjct: 284 GIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMR---EMGLSPDVVTYNSLIDGYGKVGSL 340
Query: 249 EGILTM---MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDI 302
E + ++ M G P TY L+ Y K M ++ ++ + + Y +
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
I A G + AI FV+ M + GL P+ TYT L+ K G++
Sbjct: 401 IDAFCKEGMMQ-----GAIKLFVD----------MRRTGLLPNEFTYTSLIDANCKAGNL 445
Query: 363 DSIRRLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEII-SKIQPGVGYSADAANHI 418
+LL Q G L Y ++ L +G +E+ S ++ G+ + +
Sbjct: 446 TEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTAL 505
Query: 419 YH-LINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRH 457
H I +++ A +I+ + NI + + G + H
Sbjct: 506 VHGYIKAERMEDAMKILKQMTE-CNIKPDLILYGSIIWGH 544
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/219 (19%), Positives = 91/219 (41%), Gaps = 16/219 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E ++ D+ Y +++ + L +++S+GI N V ++ +I Y
Sbjct: 527 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVI------STTIIDAYF 580
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G A + M+D + + LI G +A + A M GL+P+
Sbjct: 581 KAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVA 640
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA-----SAEG 250
YT L+ G K+ ++S K ++ + + +T L+ ++ A
Sbjct: 641 VYTSLIDGLCKNNCIESAKKLFDEMQCRG-----MTPDITAFTALIDGNLKHGNLQEALV 695
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+++ M++ +E YT L+ G+++ G++ R+ +
Sbjct: 696 LISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNE 734
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 41/218 (18%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK 129
+ H GEL + ++ NAL+ + + ++G+EPN VTY +
Sbjct: 322 LACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTY------AI 375
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI C+ G ++ A + + MR+K ++ +N+LI G+ Q ++ A G+L M + G
Sbjct: 376 LIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKG 435
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
L PSA +Y+ L+ G + G D+ASA
Sbjct: 436 LAPSAASYSPLIAGLCRKG-----------------------------------DLASAM 460
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ M++ G+ + T+T L+ G+ K G+MD RL
Sbjct: 461 ELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLF 498
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 43/310 (13%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
PLD Y A +R Y + + L ++ES+G++ + V Y L+ C++
Sbjct: 192 PLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYG------LCRNNR 245
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A ++ M ++ E + L+YG + ++ A + M PS + +
Sbjct: 246 VLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSF 305
Query: 200 LMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILT 253
++ G K G +D + + L LF C N LI AE +
Sbjct: 306 MVDGLRKRGHIDKAFRLACHLGELGMVPNLFAC------NALIDKLCKDRRFREAERLFR 359
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSG 310
M+ GLEP+ TY L+ K G MD + + + G + Y +I+ G
Sbjct: 360 GMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLIN-----G 414
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPM--MSQAGLEPSAQTYTKLMCGYAKHGDMDS---I 365
+ ++ + FH G + M + GL PSA +Y+ L+ G + GD+ S +
Sbjct: 415 YCQHDN------------FHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMEL 462
Query: 366 RRLLAQNGSS 375
R +A+NG S
Sbjct: 463 HREMARNGVS 472
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 142/344 (41%), Gaps = 45/344 (13%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ Y F L ++ ++ I PN +T+ LI +C+D N+ A K
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG------FCRDENVTAAKK 320
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M+ + + +N+LI G + A G+ MS GL+P+ TY L+ G+
Sbjct: 321 VFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFC 380
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQAGLEP 262
K + + + + + +F N LI + M A + +MM G+ P
Sbjct: 381 KKKMLKEAREMLDDIGKRGLAPNVITF---NTLIDAYGKAGRMDDAFLLRSMMLDTGVCP 437
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVS 319
+ TY L+ G+ + G++ R+L + + + D Y ++ AL G E
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKG------ETR 491
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ--NGSSLV 377
V ++ E +M + G + TY L+ G+ G ++ RLL + +
Sbjct: 492 KAVRLLD------EMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIP 545
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHL 421
N DI+ DE++ K G+ D H+Y++
Sbjct: 546 NRTTYDILR-----------DEMMEK-----GFIPDIDGHLYNV 573
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 137/344 (39%), Gaps = 65/344 (18%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D + +++ G P+ +TY +I YC+ G + A +L+ M K +E FN
Sbjct: 250 DVVEDMKAWGFSPSVITYNTIIDG------YCKAGKMFKADALLKEMVAKRIHPNEITFN 303
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
LI G + ++ +A+ + M + GL+P+ TY L+ G +G +D
Sbjct: 304 ILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLD------------ 351
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
A G+ MS GL+P+ TY L+ G+ K +
Sbjct: 352 -----------------------EALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEA 388
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
R +L G + + + + G +D+ +L MM G+
Sbjct: 389 REMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA------------FLLRSMMLDTGVC 436
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHG----EY 396
P+ TY L+ G+ + G++ R+L + + + D Y ++ AL G
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496
Query: 397 IDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
+DE+ + G A+ + I NKG+++ A R++N +
Sbjct: 497 LDEMT--LMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEM 538
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 11/136 (8%)
Query: 67 EDPFSVHTGELDVPL--DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL 124
+D F + + LD + ++S YN L+ + + ++E G++ + VTY
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTY--- 477
Query: 125 ISNSKLISKYCQDGNIEGATKILE---FMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
+ L+ C+ G A ++L+ M K + +N LI G + A +
Sbjct: 478 ---NILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRL 534
Query: 182 LTMMSQAGLEPSAQTY 197
L M + GL P+ TY
Sbjct: 535 LNEMLEKGLIPNRTTY 550
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 83.2 bits (204), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 155/385 (40%), Gaps = 43/385 (11%)
Query: 67 EDPFSVHTGELDVPL--DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL 124
E+ F +D L D Y AL+ L ++ G++PN V Y L
Sbjct: 295 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTL 354
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
+ + ++G A IL+ M ++ +++ LI G + + A +L
Sbjct: 355 VDG------FMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKE 408
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
M + GL P TY LM G+ + D D + ++ L +S+ + + + +
Sbjct: 409 MIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGE 468
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLD 301
A +L M GL+P+A Y L+ G++K G++ L + + V+ D Y
Sbjct: 469 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNS 528
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+I L+ G E +E A V + GL P TY+ L+ GY K G+
Sbjct: 529 LIKGLSTVGRMEEAEEYYAQV---------------QKRGLVPDEFTYSGLIHGYCKTGN 573
Query: 362 MDSIRRLLAQ--NGSSLVNGD-YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHI 418
++ +LL Q N N D Y D++ S E + I +Q +G NHI
Sbjct: 574 LEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSI---LQSMLGSGDKPDNHI 630
Query: 419 YHLINKGQIDAAYRIVNTLARSANI 443
Y + ++ L+RS N+
Sbjct: 631 YGI-----------VIRNLSRSENM 644
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 34/265 (12%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L K+ + P+ Y LI + G +E A + ++ + E ++ L
Sbjct: 511 LEKMTKANVHPDLFCYNSLIKGLSTV------GRMEEAEEYYAQVQKRGLVPDEFTYSGL 564
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL----- 220
I+G+ + ++ A+ +L M +GL+P+A TYT L+ GY K D + + + + S+
Sbjct: 565 IHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD 624
Query: 221 KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
KP + ++ L+ S +M A +LT + + GL P Y+ L+ G K DM
Sbjct: 625 KPDNHIYGIVIRNLSR-----SENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADM 679
Query: 281 DSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
+ LL A+ G Y +I SG D A F +I
Sbjct: 680 EKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSG-----DISRARNVFDSIL--------- 725
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDM 362
GL P+ TYT L+ G K+GD+
Sbjct: 726 -AKGLVPNCVTYTALIDGNCKNGDI 749
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 139/341 (40%), Gaps = 49/341 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ + + + ++ + N VTY +IS C+ G +E
Sbjct: 242 DVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISG------LCRSGAVE 295
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A E M D + AL+ G + + + A+ +L MS +GL+P+ Y L+
Sbjct: 296 EAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLV 355
Query: 202 CGYAKHGD----MDSIKTKIPS-LKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTM 254
G+ K G D +K I + ++P ++ NL+ + + A +L
Sbjct: 356 DGFMKEGKTAEAFDILKEMISAGVQPNKIMY-------DNLIRGLCKIGQLGRASKLLKE 408
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
M + GL P TY LM G+ + D D LL + +S + + Y +I+ L +G
Sbjct: 409 MIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGE 468
Query: 312 ----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
G ++E M GL+P+A Y L+ G++K G++
Sbjct: 469 SKEAGNLLEE-------------------MISEGLKPNAFMYAPLIIGHSKEGNISLACE 509
Query: 368 LLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQ 405
L + + V+ D Y +I L+ G E +E +++Q
Sbjct: 510 ALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQ 550
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 11/184 (5%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L ++E G+ P+ Y S LIS C+ ++E A +L+ M + +NAL
Sbjct: 651 LTEVEKNGLVPDLHIY------SSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNAL 704
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I G ++ D++ A + + GL P+ TYT L+ G K+GD I K +
Sbjct: 705 IDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGD---ITDAFDLYKEMLD 761
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQT--YTKLMCGYAKHGDMDSV 283
+ + N+L SD A E L + + A + L+ G+ K G +
Sbjct: 762 RGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQET 821
Query: 284 RRLL 287
+LL
Sbjct: 822 EKLL 825
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 95/242 (39%), Gaps = 12/242 (4%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ Y + G++ A +++ M D + N L+ +A+ M + M AG
Sbjct: 179 LVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAG 238
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+ P TY+ + + K D D+ K ++ + ++ + + S + A
Sbjct: 239 ILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 298
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
G M GL P A TY LM G K + + LL + S + + +++ V
Sbjct: 299 GFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNI--VVYGTLVD 356
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G ++ E F + M AG++P+ Y L+ G K G + +LL
Sbjct: 357 G---FMKEGKTAEAFDIL-------KEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLL 406
Query: 370 AQ 371
+
Sbjct: 407 KE 408
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG-NIEGAT 144
Y AL+ N D ++ +GI P+ Y L + C D ++E A
Sbjct: 736 YTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATG-------CSDAADLEQAL 788
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
+ E M ++ + + +FN L++G + + E +L +M + P+AQT K++ +
Sbjct: 789 FLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEF 847
Query: 205 AKHGDM 210
K G +
Sbjct: 848 GKAGKL 853
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 162/379 (42%), Gaps = 48/379 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N ++ H D ++E++GI PN VTY + LI+ C G A++
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY------NSLINCLCNYGRWSDASR 314
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M +K + FNALI + + AE + M Q ++P TY L+ G+
Sbjct: 315 LLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFC 374
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCF-SFQLTNLLILVSSDMASAEG---ILTMMSQAGLE 261
H +D K + + C + Q N LI E + MSQ GL
Sbjct: 375 MHNRLDEAKQMFKFMVSKD----CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
+ TYT ++ G+ + GD DS + + Q S+ V D + +++ + G Y +A+
Sbjct: 431 GNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM--TYSILLHGLCSYGKLDTAL 488
Query: 322 VCF---------VNICFH--WLEGPMMSQAG-------------LEPSAQTYTKLMCGYA 357
V F +NI + +EG M +AG ++P TY ++ G
Sbjct: 489 VIFKYLQKSEMELNIFIYNTMIEG--MCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLC 546
Query: 358 KH---GDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADA 414
+ D + R + ++G+ +G Y +I A E+I +++ G+ DA
Sbjct: 547 SKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS-GFVGDA 605
Query: 415 A--NHIYHLINKGQIDAAY 431
+ + + ++++ G++D ++
Sbjct: 606 STISLVTNMLHDGRLDKSF 624
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 132/328 (40%), Gaps = 43/328 (13%)
Query: 72 VHTGELDVPLDISH----YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
+ GE L ISH Y+ + + LAK+ G EP+ VT
Sbjct: 103 ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL------ 156
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S L++ YC I A +++ M + + F LI+G N + A ++ M Q
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
G +P TY ++ G K GD+D ++ K+ + + ++ + + F+ + +L +
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI-FNTIIDSLCKYRHVE 275
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
+A + T M G+ P+ TY L+ +G RLL+ +N + + +
Sbjct: 276 VAV--DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV-TFN 332
Query: 305 AL--AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
AL A G+ ++ H M Q ++P TY L+ G+ H +
Sbjct: 333 ALIDAFFKEGKLVEAEK---------LH----EEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 363 DSIRRLLA-----------QNGSSLVNG 379
D +++ Q ++L+NG
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLING 407
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 103/263 (39%), Gaps = 36/263 (13%)
Query: 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY--GHSQANDMASA 178
+ ++ +KL+S + E + E M +T IS ++ I+ + + ++ A
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQM--QTLGISHDLYTYSIFINCFCRRSQLSLA 137
Query: 179 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQ 233
+L M + G EP T + L+ GY + + + KP +F
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD-------TFT 190
Query: 234 LTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
T L+ + + + + A ++ M Q G +P TY ++ G K GD+D LL +
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME 250
Query: 292 SSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
++ + + + II +L H E A+ F M G+ P+ T
Sbjct: 251 AARIKANVVIFNTIIDSLCKYRHVEV-----AVDLFTE----------METKGIRPNVVT 295
Query: 349 YTKLMCGYAKHGDMDSIRRLLAQ 371
Y L+ +G RLL+
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSN 318
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 109/263 (41%), Gaps = 26/263 (9%)
Query: 192 PSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASA 248
PS + KL+ AK + S+ ++ +L +L+ ++ + S ++ A
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLY---TYSIFINCFCRRSQLSLA 137
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
+L M + G EP T + L+ GY + L+ Q +V Y
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ----MVEMGYKPDTFTFTT 193
Query: 309 SGHGEYI-DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
HG ++ ++ S V V+ M Q G +P TY ++ G K GD+D
Sbjct: 194 LIHGLFLHNKASEAVALVD---------QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 368 LLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQ-PGVGYSADAANHIYH-LI 422
LL + ++ + + + II +L H E ++ ++++ G+ + N + + L
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 423 NKGQIDAAYRIV-NTLARSANIN 444
N G+ A R++ N L + N N
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPN 327
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 40/217 (18%), Positives = 89/217 (41%), Gaps = 9/217 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN L+ + + + ++ +G+ N VTY + +I + Q G+ +
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY------TTIIQGFFQAGDCD 450
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M P ++ L++G + +A I + ++ +E + Y ++
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K G + SL + ++ + ++ ++ L + A+ + M + G
Sbjct: 511 EGMCKAGKVGEAWDLFCSLSIKPDV-VTYNTMISGL--CSKRLLQEADDLFRKMKEDGTL 567
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD 298
P++ TY L+ + D + L+ + SS GD
Sbjct: 568 PNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGD 604
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 16/228 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YNAL + D + ++ + G++P++VTY + LI +C++G ++
Sbjct: 383 DLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTY------TTLIDGFCKEGELD 436
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + M D+ + E + LI G S++ +E IL M +AGLEP TYT ++
Sbjct: 437 MAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVI 496
Query: 202 CGYAKHGDMDSIKTKIPSLKP-----QSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
+ K+ D +KT LK + + ++ + IL M +A+ +L M
Sbjct: 497 DAFCKNSD---VKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCIL--GQMKNADMLLNAML 551
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
G+ P TY L+ G+ KHG + L + G G Y +I+
Sbjct: 552 NIGVCPDDITYNILLDGHCKHGKVRDAEELKSAKGMVSDFGLYTSLIN 599
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 124/308 (40%), Gaps = 24/308 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y A ++ + ++ +G+ PN V + + LI +C++GN+
Sbjct: 313 DVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVF------TTLIDAHCKEGNVA 366
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
++ M + +NAL G + D+ +A I+ M GL+P TYT L+
Sbjct: 367 AGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLI 426
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K G++D + + ++ + S +E IL M +AGLE
Sbjct: 427 DGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLE 486
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P TYT ++ + K+ D+ + +LL + G Y +++ + G + D +
Sbjct: 487 PDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADML 546
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
+ + +C P TY L+ G+ KHG + L + G
Sbjct: 547 LNAMLNIGVC---------------PDDITYNILLDGHCKHGKVRDAEELKSAKGMVSDF 591
Query: 379 GDYLDIIH 386
G Y +I+
Sbjct: 592 GLYTSLIN 599
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 134/299 (44%), Gaps = 30/299 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP + +N L+R + + S + ++ +G+ P VT+ L+S C+
Sbjct: 240 VPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSG------MCKAS 293
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A + M + A + G +A + A + M + G+ P+ +T
Sbjct: 294 DLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFT 353
Query: 199 KLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
L+ + K G++ + + ++ + +++L + L N L V D+ +A I+ M
Sbjct: 354 TLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNA--LANGLCRV-RDLKAANDIVEEM 410
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
GL+P TYT L+ G+ K G++D +++ ++ G +L Y +I L+ SG
Sbjct: 411 RNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRS 470
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D I+C M +AGLEP TYT ++ + K+ D+ + +LL +
Sbjct: 471 --VDS-ERILC------------EMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKE 514
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 19/230 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y ++ Y ++ + IE N V Y LI YC++GN+
Sbjct: 546 DAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVY------GTLIRAYCENGNMR 599
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + MR + P + +++LI+G S + SA +L M + GL P+ YT L+
Sbjct: 600 EAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALI 659
Query: 202 CGYAKHGDM---DSI--KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
GY K G M DSI + I ++ P + ++ + L +M +A +L M+
Sbjct: 660 GGYCKLGQMHKVDSILQEMSINNVHPNK---ITYTIMINGHCKL--GNMKAAAKLLNEMA 714
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRR---LLAQSGSSLVNGDYLDII 303
Q G+ P A TY L G+ K G M+ + L++ G SL + Y +I
Sbjct: 715 QKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 139/322 (43%), Gaps = 39/322 (12%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + LD YN L+ ++ +GI+P+ TY L+ C
Sbjct: 470 ERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHG------LC 523
Query: 136 QDGNIEGATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
G IE A + E ++ FP + + +I G+ +AN + E + M +E +A
Sbjct: 524 NMGKIEEAGGLWHECKKNGNFPDAY-TYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNA 582
Query: 195 QTYTKLMCGYAKHGDM-------DSIKTK-IPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
Y L+ Y ++G+M D ++++ IP S + L+N+ ++
Sbjct: 583 VVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQ---TSATYSSLIHGLSNIGLV-----D 634
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
SA +L M + GL P+ YT L+ GY K G M V +L + + V+ + I + +
Sbjct: 635 SANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPN--KITYTI 692
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
++GH + + + A +N M+Q G+ P A TY L G+ K G M+
Sbjct: 693 MINGHCK-LGNMKAAAKLLN---------EMAQKGIVPDAVTYNALTNGFCKEGKMEEAL 742
Query: 367 R---LLAQNGSSLVNGDYLDII 385
+ L++ G SL + Y +I
Sbjct: 743 KVCDLMSTGGISLDDITYTTLI 764
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 100/508 (19%), Positives = 205/508 (40%), Gaps = 66/508 (12%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
++ V ++ YN ++ N F K+E + ++P+ VTY LI+ + ++
Sbjct: 225 KVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERF- 283
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ A IL+ M D+ + + V+N LI G+ + ++++A I M G+ P++
Sbjct: 284 -----DEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSV 338
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T L+ GY K M+ + + + + +F + + SA + M
Sbjct: 339 TCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEM 398
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSG-- 310
+P+ T L+ G ++G L L + G + +IH L +G
Sbjct: 399 LLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSK 458
Query: 311 ------------HGEYIDEVSAIVCFVNICFHWLEGPM---------MSQAGLEPSAQTY 349
G +D +S + C EG + M + G++P TY
Sbjct: 459 EEAAKLLKEMLERGLVLDSISYNTLILACC---KEGKVEEGFKLKEEMVRRGIQPDMYTY 515
Query: 350 TKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLD-IIHALAVSGHGEYIDEIISKIQPGV 408
L+ G G ++ L + NG++ D + + + G+ + ++++ G
Sbjct: 516 NMLLHGLCNMGKIEEAGGLWHECKK---NGNFPDAYTYGIMIDGYCK-----ANRVEEG- 566
Query: 409 GYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGV-G 467
++ + +I+ + TL R+ NG F +R +++ G+
Sbjct: 567 -------EKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMRE--AFRLRDDMRSR--GIPQ 615
Query: 468 YSADAANHIYHLINKGQIDAAYRIVNTLAR---SANINGEQLPVGGFLVRHMVKTNQPID 524
SA ++ I+ L N G +D+A ++++ + + S N+ +GG+ K Q +
Sbjct: 616 TSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGY-----CKLGQ-MH 669
Query: 525 KVLAVCHRLTDENLHPRAFNLAVLIKAH 552
KV ++ ++ N+HP ++I H
Sbjct: 670 KVDSILQEMSINNVHPNKITYTIMINGH 697
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 88/230 (38%), Gaps = 44/230 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ ++ ++ + + K+E G+ PN VTY +I C++G ++
Sbjct: 196 DVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHG------LCKNGRLD 249
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + E M + S + LI G + A IL MS G P+ Y L+
Sbjct: 250 EAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLI 309
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY + G++ + + + DM S G+
Sbjct: 310 DGYCRIGNISTA-------------------------LQIRDDMIS----------NGIS 334
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ--SGSSLVN-GDYLDIIHALAV 308
P++ T L+ GY K M+ LL + +G ++N G + +IH L +
Sbjct: 335 PNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCL 384
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y AL+ Y L ++ + PN++TY + +I+ +C+ GN++
Sbjct: 651 NVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITY------TIMINGHCKLGNMK 704
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+L M K +NAL G + M A + +MS G+ TYT L+
Sbjct: 705 AAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764
Query: 202 CGYAK 206
G+ K
Sbjct: 765 DGWHK 769
Score = 39.7 bits (91), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 87/236 (36%), Gaps = 56/236 (23%)
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKI 217
+F+ ++ + A + M + G+ P+ TY ++ G K+G +D K K+
Sbjct: 199 LFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKM 258
Query: 218 PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
+ + L + + + L+ L D A+ IL MS G P+ Y L+ GY +
Sbjct: 259 EKERVKPSL-VTYGVLINGLVKLERFDEANC--ILKEMSDRGYAPNNVVYNTLIDGYCRI 315
Query: 278 GDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
G++ + AL + M
Sbjct: 316 GNIST----------------------ALQIRDD-------------------------M 328
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ--NGSSLVN-GDYLDIIHALAV 390
G+ P++ T L+ GY K M+ LL + G ++N G + +IH L +
Sbjct: 329 ISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCL 384
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 111/284 (39%), Gaps = 67/284 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + +E+ +++ QG+ PN VTY LI+ C DG ++ A
Sbjct: 231 YNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILING------LCSDGKVDEAVA 284
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + N LI G + + A + M + G++P+A TYT L+ Y
Sbjct: 285 LRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYC 344
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G M+ +F L N MM G+ P
Sbjct: 345 KDGRMED------------------AFALYN-----------------MMIDRGIFPEVS 369
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHG----EYIDEV 318
TY L+ G + GD+ + R L+ + S ++ D Y +I +L G + +DE
Sbjct: 370 TYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDE- 428
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
M + GL PS TY LM GY + G++
Sbjct: 429 ------------------MFEKGLNPSHVTYNTLMDGYCREGNL 454
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 87/218 (39%), Gaps = 44/218 (20%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D+ ++ +N L+ + N+ + +E QG++PN +TY + LI YC+D
Sbjct: 293 DLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTY------TTLIDAYCKD 346
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G +E A + M D+ +N LI G + D+ +A ++ M L TY
Sbjct: 347 GRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTY 406
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
L +DS+ K S K A +L M +
Sbjct: 407 NIL---------IDSLCKKGESRK--------------------------AVKLLDEMFE 431
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGS 292
GL PS TY LM GY + G++ + VR + + G
Sbjct: 432 KGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGK 469
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 125/318 (39%), Gaps = 79/318 (24%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK---ILEFMRDKTFPISEG 160
D + ++ G+ PN +TY LI YC+ G I K IL+ M K +E
Sbjct: 176 DVIEDMKVWGVSPNVITYNTLIDG------YCKMGRIGKMYKADAILKEMVAKGICPNEV 229
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKI 217
+N LI G + +++ A + M + GL P+ TY L+ G G +D +++ ++
Sbjct: 230 TYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQM 289
Query: 218 PS--LKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
S L+P + N+LI + + A + M + G++P+A TYT L+
Sbjct: 290 VSSDLEP--------NVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLID 341
Query: 273 GYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWL 332
Y K G M + +L N
Sbjct: 342 AYCKDGRM--------EDAFALYN------------------------------------ 357
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALA 389
MM G+ P TY L+ G + GD+ + R L+ + S ++ D Y +I +L
Sbjct: 358 ---MMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLC 414
Query: 390 VSGHG----EYIDEIISK 403
G + +DE+ K
Sbjct: 415 KKGESRKAVKLLDEMFEK 432
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
FN ++ G + + A ++ M G+ P+ TY L+ GY K G + + LK
Sbjct: 158 FNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILK 217
Query: 222 PQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+C + N+LI +++ A + M + GL P+ TY L+ G G
Sbjct: 218 EMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDG 277
Query: 279 DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
+D L Q SS + + + H + ++G + AI F + M
Sbjct: 278 KVDEAVALRDQMVSSDLEPNV--VTHNVLINGFCKNKTVNEAINLFND----------ME 325
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMD 363
+ G++P+A TYT L+ Y K G M+
Sbjct: 326 KQGVDPNAMTYTTLIDAYCKDGRME 350
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 131/340 (38%), Gaps = 62/340 (18%)
Query: 58 SLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPN 117
+L +LP F V ++ YN L+R + + G PN
Sbjct: 127 ALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPN 186
Query: 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV-FNALIYGHSQANDMA 176
VTY + L++ +C+ G ++GA +++ MR++ V FN+++ G +A M
Sbjct: 187 AVTY------NTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRME 240
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236
A + M + GL P +Y L+ GY K G C L
Sbjct: 241 GARKVFDEMVREGLAPDVVSYNTLLSGYCKVG--------------------CLHESLA- 279
Query: 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSS 293
+ + M+Q GL P T+T L+ K G+++ L+AQ G
Sbjct: 280 --------------VFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 325
Query: 294 LVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
+ + +I G ++D+ L M + G++PS Y L+
Sbjct: 326 MNEVTFTALIDGFCKKG---FLDDA------------LLAVEEMRKCGIQPSVVCYNALI 370
Query: 354 CGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
GY K G MD R L+ + + V D + ++ +SG+
Sbjct: 371 NGYCKLGRMDLARELIREMEAKRVKPDV--VTYSTIISGY 408
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 55/283 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN LL Y +++ +G+ P+ VT+ LI + C+ GN+E
Sbjct: 257 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT------CKAGNLE 310
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ MR++ ++E F ALI G + + A + M + G++PS Y L+
Sbjct: 311 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALI 370
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K G MD + I ++ + ++
Sbjct: 371 NGYCKLGRMDLARELIREMEAKR-----------------------------------VK 395
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD-IIHALAVSGHGEYIDEVSA 320
P TY+ ++ GY K G++DS +L + L G D I ++ + G E A
Sbjct: 396 PDVVTYSTIISGYCKVGNLDSAFQL---NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA 452
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
F N M Q G++P TYT L+ G+ K G+++
Sbjct: 453 CELFEN----------MLQLGVQPDEFTYTTLIDGHCKEGNVE 485
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 81/210 (38%), Gaps = 28/210 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI---------SNSKLIS 132
D+ Y+ L+ + T L KL + P+ + Y L+ S L+
Sbjct: 502 DVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLK 561
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C G ++ A K+ + M D+ + + V++ LI+GH + ++ A M ++G P
Sbjct: 562 GFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSP 621
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
++ + L+ G + G + I L L +A AE
Sbjct: 622 NSTSTISLVRGLFEEGMVVEADNAIQDL-------------------LTCCPLADAEASK 662
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
++ E + ++CG A+ G + S
Sbjct: 663 ALIDLNRKEGNVDALIDVLCGMARDGLLPS 692
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 103/259 (39%), Gaps = 39/259 (15%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
F+ALI ++ + A L + AG PS Y ++ + + S + + S+
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSD-ASLPSARRFLSSML 144
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
+++ + + + A G++ M AG P+A TY L+ + + G++D
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 282 SVRR---LLAQSG---------SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICF 329
R L+ + G +S+VNG + A + G + DE
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNG----LCKAGRMEGARKVFDE------------ 248
Query: 330 HWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIH 386
M + GL P +Y L+ GY K G + ++ + Q G + +IH
Sbjct: 249 -------MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 301
Query: 387 ALAVSGHGEYIDEIISKIQ 405
A +G+ E ++++++
Sbjct: 302 ATCKAGNLEQAVALVAQMR 320
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 149/364 (40%), Gaps = 36/364 (9%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P ++ +N L+ + + ++ +G+ P+ V++ LIS YC+ N
Sbjct: 223 PPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISG------YCRSKN 276
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+E + M + ++ALI G + + + A G+ M + GL P+ T+T
Sbjct: 277 VEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTT 336
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L+ G KHG +D +K + ++ + D+ A +L M G
Sbjct: 337 LIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNG 396
Query: 260 LEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGH----- 311
+P T+T LM G K GDMDS ++ + + G L + + +I L G
Sbjct: 397 FKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAE 456
Query: 312 ---------GEYIDEVS---AIVCFVNICFHWLEGPM---MSQAGLEPSAQTYTKLMCGY 356
G D+ + I CF + + M + G P TY LM G+
Sbjct: 457 RMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGF 516
Query: 357 AKHGDMDSIRRLLAQNGSSLVNGDYL--DIIHALAVSGHGEYIDEIISKIQPG-VGYSAD 413
K G M + + LL +++N + + DI + + GH ++ + KI G G +D
Sbjct: 517 CKQGQMKNAKMLL----HAMLNMEVVPNDITFNILLDGHCKHGSSVDFKIFNGEKGLVSD 572
Query: 414 AANH 417
A++
Sbjct: 573 YASY 576
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 129/306 (42%), Gaps = 31/306 (10%)
Query: 152 DKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 211
D +P + +FN L++G + D+ +A + +S+ GL PS ++ L+ GY + +++
Sbjct: 219 DYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVE 278
Query: 212 S---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYT 268
+K+ + S + ++F +S + L S + A G+ M + GL P+ T+T
Sbjct: 279 EGFVLKSVMESERISPDVFT-YSALINGL--CKESRVEEANGLFDEMCEMGLVPNGVTFT 335
Query: 269 KLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFV 325
L+ G KHG +D R + D Y +I+ L G + E ++
Sbjct: 336 TLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGD---LKEARKLL--- 389
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYL 382
M G +P T+T LM G K GDMDS I+ + + G L + +
Sbjct: 390 ---------NEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFT 440
Query: 383 DIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLAR 439
+I L G + ++ + G+ D + I KG + +++ + R
Sbjct: 441 ALISGLCRDGRVRDAERMLKDML-SAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQR 499
Query: 440 SANING 445
+ G
Sbjct: 500 DGRVPG 505
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 116/286 (40%), Gaps = 24/286 (8%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+V D+ Y+A++ Y + ++ + G+EPN TY LI+ +C+
Sbjct: 248 NVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALING------FCKI 301
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G IE A +L M+ + ++ VFN +I G+ + + A I +M + G+E TY
Sbjct: 302 GQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTY 361
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
L CG + M+ K + + + S+ + DM A + M
Sbjct: 362 NTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEG 421
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY 314
G PS TY ++ GY K+G + R + + D Y ++H V+G
Sbjct: 422 KGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGK--- 478
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
V++ E M G +P+ YT L+ G AK G
Sbjct: 479 ----------VDVALRLFE--EMKHRGTKPNVVAYTALVSGLAKEG 512
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 136/347 (39%), Gaps = 81/347 (23%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN----------- 127
V L+ YN+LL Y + + L ++E++G+EP TY L+
Sbjct: 179 VGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVE 238
Query: 128 ------------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
S +I+ YC+ GN+ A+++ + +E + ALI G
Sbjct: 239 AVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGF 298
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD-SIKTKIPSLKPQSELFL 228
+ + +AE +L M G+ + + ++ GY +HG ++ +++ K K EL +
Sbjct: 299 CKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDI 358
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
+++ + + M A+ +L +M++ G+ P+ +YT L+ +AK GDM RRL
Sbjct: 359 -YTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRL-- 415
Query: 289 QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
F +EG G PS T
Sbjct: 416 ----------------------------------------FRDMEG-----KGSRPSVVT 430
Query: 349 YTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSG 392
Y ++ GY K+G + R + + D Y ++H V+G
Sbjct: 431 YNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNG 477
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 120/272 (44%), Gaps = 31/272 (11%)
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
+S S ++ +C+ G+++ A +L+ + ++ +N+L+ +++ + + G+L
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
M G+EP+ TYT L+ G ++ GD+ ++ +K ++ + + +
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL---D 301
+ A + G+EP+ +TY L+ G+ K G +++ LLA V + +
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNT 328
Query: 302 IIHALAVSGHGEYIDEVSAI-------------------VCFVNICFHWLEGP-----MM 337
+I G E E+ A+ +C VN +E +M
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVN----RMEDAKKLLHIM 384
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
++ G+ P+ +YT L+ +AK GDM RRL
Sbjct: 385 AEKGVAPNYVSYTTLISIHAKEGDMVEARRLF 416
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 22/174 (12%)
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFL--CFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
G+ K G +D + L P+ + L C L + +D A A G+L M G+
Sbjct: 157 GFCKSGSVDDAHGLLDEL-PRHGVGLNACCYNSLLDSYTRQRNDDAVA-GLLKEMENRGV 214
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
EP+ TYT L+ G ++ GD+ V + + V GD Y +I+A G+ E
Sbjct: 215 EPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASE 274
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
V F H G+EP+ +TY L+ G+ K G +++ LLA
Sbjct: 275 V-----FDECVGH----------GVEPNERTYGALINGFCKIGQIEAAEMLLAD 313
>gi|443700568|gb|ELT99448.1| hypothetical protein CAPTEDRAFT_222321 [Capitella teleta]
Length = 2716
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 7/133 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQ-GIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
YN L L N+ L +E + + P+ +TYQ LI N +CQ+G++E A+
Sbjct: 1545 YNTYLDAILQNKGKLDDDIVLKVMEERLHVLPDVMTYQLLIKN------HCQEGDMEAAS 1598
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
KIL +M+ + F + +F+ LIYGH + D SAE I+ M++A L ++ TY ++ Y
Sbjct: 1599 KILSYMQQRGFSMESWIFDTLIYGHMKNKDYESAEAIINSMNEADLRMTSDTYETIIRSY 1658
Query: 205 AKHGDMDSIKTKI 217
A +G ++ + KI
Sbjct: 1659 ANNGMIEEMFQKI 1671
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
+ LI H Q DM +A IL+ M Q G + + L+ G+ K+ D +S
Sbjct: 1580 TYQLLIKNHCQEGDMEAASKILSYMQQRGFSMESWIFDTLIYGHMKNKDYES-------- 1631
Query: 221 KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
AE I+ M++A L ++ TY ++ YA +G +
Sbjct: 1632 ---------------------------AEAIINSMNEADLRMTSDTYETIIRSYANNGMI 1664
Query: 281 DSV-RRLLAQSGSSLVNGDYL--DIIHALAVSGHGEYIDEVSAIV 322
+ + +++ +G L +G+ + ++I L+ G + + +I+
Sbjct: 1665 EEMFQKIDECTGKGLFSGNVVLFELIGILSEKGDTASVQRIFSIL 1709
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 22/179 (12%)
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P TY L+ + + GDM++ ++L+ Q G S+ + + +I+ GH + D
Sbjct: 1576 PDVMTYQLLIKNHCQEGDMEAASKILSYMQQRGFSMESWIFDTLIY-----GHMKNKDYE 1630
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-RRLLAQNGSSLV 377
SA +N M++A L ++ TY ++ YA +G ++ + +++ G L
Sbjct: 1631 SA-EAIIN---------SMNEADLRMTSDTYETIIRSYANNGMIEEMFQKIDECTGKGLF 1680
Query: 378 NGDYL--DIIHALAVSGHGEYIDEIISKIQPG-VGYSADAANHIYHLINKGQIDAAYRI 433
+G+ + ++I L+ G + I S + P V + D L+ +GQ++ A +
Sbjct: 1681 SGNVVLFELIGILSEKGDTASVQRIFSILNPDHVLFWKDLTRATIDLVAQGQVETAVEL 1739
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 115/286 (40%), Gaps = 24/286 (8%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+V D+ Y A++ Y + ++ + GIEPN TY LI+ +C+
Sbjct: 232 NVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLING------FCKI 285
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G +E A +L M+ + ++ +FN +I G+ + + +A + M + G+E TY
Sbjct: 286 GQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTY 345
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
L CG + M KT + + + ++ + DM A + M+
Sbjct: 346 NTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAG 405
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY 314
G PS TY +M GY K G + R + + D Y ++H V+G
Sbjct: 406 KGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGK--- 462
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
V++ E M G EP+ YT L+ G AK G
Sbjct: 463 ----------VDVALKLFE--EMKHRGTEPNVVAYTALISGLAKEG 496
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 132/347 (38%), Gaps = 81/347 (23%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN----------- 127
V L+ YN+LL Y+ + + L +E+ GIE TY L+ +
Sbjct: 163 VRLNALCYNSLLDCYVRRKDDARVQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVE 222
Query: 128 ------------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
+ +I+ YC+ GN+ A+++ + +E + LI G
Sbjct: 223 AVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGF 282
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD-SIKTKIPSLKPQSELFL 228
+ M +AE +L M G+ + + ++ GY + G +D ++K K K EL +
Sbjct: 283 CKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDV 342
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
+++ + + MA A+ +L +M + G+ P+ TYT L+ + K GDM RRL
Sbjct: 343 -YTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFR 401
Query: 289 QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
+ M+ G PS T
Sbjct: 402 E-----------------------------------------------MAGKGAMPSVVT 414
Query: 349 YTKLMCGYAKHGDM---DSIRRLLAQNGSSLVNGDYLDIIHALAVSG 392
Y +M GY K G + + R+ + + G Y ++H V+G
Sbjct: 415 YNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNG 461
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
++ S ++ +C+ G ++ A +L+ M ++ +N+L+ + + D A + +L +
Sbjct: 133 LAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEI 192
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
M G+E + TYT L+ + GD+ ++ + +K ++ + + + +
Sbjct: 193 MENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGN 252
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ------SGSSLVNGD 298
+ A + G+EP+ +TY L+ G+ K G M++ LLA + ++
Sbjct: 253 VRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNT 312
Query: 299 YLD-------IIHALAVSGHGEYI---------DEVSAIVCFVNICFHWLEGP----MMS 338
+D + +AL V E + + ++ +C VN E +M
Sbjct: 313 MIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVN---RMAEAKTLLHIMI 369
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ G+ P+ TYT L+ + K GDM RRL +
Sbjct: 370 EKGVPPNYVTYTTLISIHCKEGDMVEARRLFRE 402
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ Y+ F ++E +G+ P+ TY L+ +C +G ++ A K
Sbjct: 415 YNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHG------HCVNGKVDVALK 468
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ E M+ + + + ALI G ++ A + M +AGL P Y+ L+
Sbjct: 469 LFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 117/289 (40%), Gaps = 59/289 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+++ + + L ++ +QGI P+ V Y + LI +C+ GNI+ A K
Sbjct: 48 YNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVY------TTLIDGFCKLGNIQAAYK 101
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + + A+I G + M A+ + M G+EP TYT L+ GY
Sbjct: 102 LFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYC 161
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G+M+ +F L N M Q+GL P+
Sbjct: 162 KSGEMEK------------------AFSLHN-----------------QMVQSGLTPNVV 186
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TYT L G K G +D+ LL + G L Y +++ L SG+ I + ++
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGN---IRQAVKLM 243
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M AG+ P T+T LM Y K G+M LL +
Sbjct: 244 ------------EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLRE 280
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 113/290 (38%), Gaps = 60/290 (20%)
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLI 239
M G P +Y+ ++ GY G++ + + ++ LKP +++ LL+
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNL-----YTYNSIILLL 55
Query: 240 LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDY 299
S + AE +L M G+ P YT L+ G+ K G++ + +L + + D+
Sbjct: 56 CKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDF 115
Query: 300 LDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP----MMSQAGLEPSAQTYTKLMCG 355
+ +A++C + C +E M G+EP TYT L+ G
Sbjct: 116 I----------------AYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDG 159
Query: 356 YAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSA 412
Y K G+M+ S+ + Q+G + Y + L G
Sbjct: 160 YCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQ------------------V 201
Query: 413 DAANHIYH-LINKG---QIDAAYRIVNTLARSANING-----EQLPVGGF 453
D AN + H + KG I +VN L +S NI E++ V G
Sbjct: 202 DTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGM 251
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 87/224 (38%), Gaps = 44/224 (19%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ L+I YN+L+ + + + ++E G+ P+ +T+ + L+ YC+ G
Sbjct: 216 LQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITF------TTLMDAYCKTG 269
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A ++L M D+ + FN L+ G + + E +L M + G+ P+ TY
Sbjct: 270 EMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYN 329
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
LM Y + ++M I M
Sbjct: 330 SLMKQYC-----------------------------------IRNNMRCTTEIYKGMCAR 354
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDY 299
G+ P + TY L+ G+ K +M + + +A+ G +L Y
Sbjct: 355 GVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSY 398
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 131/304 (43%), Gaps = 27/304 (8%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ +G+ P+ TY LI YC++G +E A +IL+ M + +E +N
Sbjct: 131 ILDEMVEKGLVPSVPTYNALIDG------YCKEGMVEAAQEILDLMHSNSCNPNERTYNE 184
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
LI G + ++ A +L+ M ++ L PS TY L+ G K G +DS + +
Sbjct: 185 LICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENG 244
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ +++ + + + A + + + G++ + YT L+ GY K G MD
Sbjct: 245 VVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDAN 304
Query: 285 RLLAQ--SGSSLVNGD-YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
LL + + L N Y +I L + E ++ M Q G
Sbjct: 305 SLLDRMLTEDCLPNSSTYNALIDGLCKE---RKVQEALLLM------------ESMIQKG 349
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYID 398
L+ + TYT L+ K GD D R+L Q SS D Y IHA G+ + +
Sbjct: 350 LKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAE 409
Query: 399 EIIS 402
+++S
Sbjct: 410 DMMS 413
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 150/367 (40%), Gaps = 64/367 (17%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ Y ++ ++ + +++ +G EPN TY + +I+ C++ +E
Sbjct: 74 VRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTY------TVMINAMCKETKLEE 127
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
+IL+ M +K S +NALI G+ + + +A+ IL +M P+ +TY +L+C
Sbjct: 128 GRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELIC 187
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
G+ + ++ A +L+ M ++ L P
Sbjct: 188 GFCR-----------------------------------KKNVHRAMALLSKMLESRLTP 212
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVS 319
S TY L+ G K G +DS RLL + V D Y I L G I+E
Sbjct: 213 SVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGR---IEE-- 267
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ--NGSSLV 377
N+ F+ L+ + G++ + YT L+ GY K G MD LL + L
Sbjct: 268 -----ANVLFNSLK-----EKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP 317
Query: 378 NGD-YLDIIHALAVSGH-GEYIDEIISKIQPGVGYSADAAN-HIYHLINKGQIDAAYRIV 434
N Y +I L E + + S IQ G+ + I ++ +G D A+RI+
Sbjct: 318 NSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRIL 377
Query: 435 NTLARSA 441
+ + S
Sbjct: 378 DQMVSSG 384
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 126/328 (38%), Gaps = 67/328 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNAL+ Y + + L + S PN TY +LI +C+ N+ A
Sbjct: 147 YNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICG------FCRKKNVHRAMA 200
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY-------- 197
+L M + S +N+LI+G + + SA +L +M++ G+ P TY
Sbjct: 201 LLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLC 260
Query: 198 ---------------------------TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
T L+ GY K G MD + + + +E L
Sbjct: 261 KKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRM--LTEDCLPN 318
Query: 231 SFQLTNLLILVSSDMASAEGILTM--MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
S L+ + + E +L M M Q GL+ + TYT L+ K GD D R+L
Sbjct: 319 SSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILD 378
Query: 289 QSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
Q SS D Y IHA G+ I E ++ MM + G+ P
Sbjct: 379 QMVSSGYQPDVYIYTAFIHAFCTRGN---IKEAEDMM------------SMMFERGVMPD 423
Query: 346 AQTYTKLMCGYAKHG----DMDSIRRLL 369
A TYT ++ Y G D ++R+
Sbjct: 424 ALTYTLVIDAYGGLGLLNPAFDVLKRMF 451
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 37/257 (14%)
Query: 130 LISKYCQDGN---------IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEG 180
+++ YC+ GN + A + M K +E + LI+G + +
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 181 ILTMMSQAGLEPSAQTYTKLMCGYAKHG-DMDSI----KTKIPSLKPQSELFLCFSFQLT 235
I M + P+ +TYT ++ + G M++I + + +P + T
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTY-------T 113
Query: 236 NLLILVSSDMASAEG--ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293
++ + + EG IL M + GL PS TY L+ GY K G +++ + +
Sbjct: 114 VMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEI------- 166
Query: 294 LVNGDYLDIIHALAVSGHGEYIDEVSAIVCF-VNICFHWLEGPMMSQAGLEPSAQTYTKL 352
LD++H+ + + + +E+ C N+ M ++ L PS TY L
Sbjct: 167 ------LDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSL 220
Query: 353 MCGYAKHGDMDSIRRLL 369
+ G K G +DS RLL
Sbjct: 221 IHGQCKIGYLDSAYRLL 237
Score = 43.5 bits (101), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 96/238 (40%), Gaps = 31/238 (13%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ S G +P+ Y + I +C GNI+ A ++ M ++ +
Sbjct: 376 ILDQMVSSGYQPDVYIY------TAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTL 429
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+I + + A +L M G +PS TY+ L+ KH + + K ++
Sbjct: 430 VIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI----KHLLKEELTKKYKNVALCD 485
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ F + ++ ++ + +A + M + G P+ TY KL+ G K G + +
Sbjct: 486 SIPNVFFADVADVWKMMKFE--TALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQ 543
Query: 285 RLLAQSG-----------SSLVN--------GDYLDIIHALAVSGHGEYIDEVSAIVC 323
+L +SL+N GD + ++ A+ GH ++ ++ + C
Sbjct: 544 KLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFC 601
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ K+ G PN TY +KLI C+ G + A K+ + M ++ SE ++N
Sbjct: 509 ELFEKMLEHGCSPNINTY------AKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYN 562
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
+L+ + A ++ M + G P ++ L CG + G + K +L
Sbjct: 563 SLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNL 619
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 131/340 (38%), Gaps = 62/340 (18%)
Query: 58 SLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPN 117
+L +LP F V ++ YN L+R + + G PN
Sbjct: 127 ALSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPN 186
Query: 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV-FNALIYGHSQANDMA 176
VTY + L++ +C+ G ++GA +++ MR++ V FN+++ G +A M
Sbjct: 187 AVTY------NTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRME 240
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236
A + M + GL P +Y L+ GY K G C L
Sbjct: 241 GARKVFDEMVREGLAPDVVSYNTLLSGYCKVG--------------------CLHESL-- 278
Query: 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSS 293
+ + M+Q GL P T+T L+ K G+++ L+AQ G
Sbjct: 279 -------------AVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLR 325
Query: 294 LVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
+ + +I G ++D+ L M + G++PS Y L+
Sbjct: 326 MNEVTFTALIDGFCKKG---FLDDA------------LLAVEEMRKCGIQPSVVCYNALI 370
Query: 354 CGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
GY K G MD R L+ + + V D + ++ +SG+
Sbjct: 371 NGYCKLGRMDLARELIREMEAKRVKPDV--VTYSTIISGY 408
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 55/283 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN LL Y +++ +G+ P+ VT+ LI + C+ GN+E
Sbjct: 257 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT------CKAGNLE 310
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ MR++ ++E F ALI G + + A + M + G++PS Y L+
Sbjct: 311 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALI 370
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K G MD + I ++ + ++
Sbjct: 371 NGYCKLGRMDLARELIREMEAKR-----------------------------------VK 395
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD-IIHALAVSGHGEYIDEVSA 320
P TY+ ++ GY K G++DS +L + L G D I ++ + G E A
Sbjct: 396 PDVVTYSTIISGYCKVGNLDSAFQL---NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA 452
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
F N M Q G++P TYT L+ G+ K G+++
Sbjct: 453 CELFEN----------MLQLGVQPDEFTYTTLIDGHCKEGNVE 485
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 60/136 (44%), Gaps = 9/136 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI---------SNSKLIS 132
D+ Y+ L+ + T L KL + P+ + Y L+ S L+
Sbjct: 502 DVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLK 561
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C G ++ A K+ + M D+ + + V++ LI+GH + ++ A M ++G P
Sbjct: 562 GFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSP 621
Query: 193 SAQTYTKLMCGYAKHG 208
++ + L+ G + G
Sbjct: 622 NSTSTISLVRGLFEEG 637
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 103/259 (39%), Gaps = 39/259 (15%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
F+ALI ++ + A L + AG PS Y ++ + + S + + S+
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSD-ASLPSARRFLSSML 144
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
+++ + + + A G++ M AG P+A TY L+ + + G++D
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 282 SVRR---LLAQSG---------SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICF 329
R L+ + G +S+VNG + A + G + DE
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNG----LCKAGRMEGARKVFDE------------ 248
Query: 330 HWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIH 386
M + GL P +Y L+ GY K G + ++ + Q G + +IH
Sbjct: 249 -------MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIH 301
Query: 387 ALAVSGHGEYIDEIISKIQ 405
A +G+ E ++++++
Sbjct: 302 ATCKAGNLEQAVALVAQMR 320
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 145/355 (40%), Gaps = 56/355 (15%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN----------- 127
V L+ YN LL Y ++ + L ++ES G+EP TY L+
Sbjct: 164 VKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVE 223
Query: 128 ------------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
S +I+ YC+ GN+ A+++ + +E + ALI G
Sbjct: 224 SVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGF 283
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSEL 226
+ + +AE +LT M G+ + + ++ GY +HG +D IK + + Q ++
Sbjct: 284 CKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDV 343
Query: 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+++ + + M A+ +L +M++ G+E + +YT L+ ++K GDM RRL
Sbjct: 344 ---YTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRL 400
Query: 287 ---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
+ GS Y +I SG I E M + GL
Sbjct: 401 FRDMEGKGSRPSVVTYNVMIDGYIKSGS---IREAERF------------KKEMEKKGLV 445
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGE 395
P TY L+ G+ +G +D RL + Q G+ Y +I LA G E
Sbjct: 446 PDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSE 500
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 30/289 (10%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+V D+ Y+A++ Y + ++ + GIEPN TY LI+ +C+
Sbjct: 233 NVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALING------FCKI 286
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G IE A +L M+ + ++ +FN +I G+ + + A I +M + G++ TY
Sbjct: 287 GQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTY 346
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS---DMASAEGILTM 254
L CG + M+ K L +E + ++ LI + S DM A +
Sbjct: 347 NTLACGLCRVNRMEDAKKL---LHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRD 403
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
M G PS TY ++ GY K G + R + + D Y ++H V+G
Sbjct: 404 MEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGK 463
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
V++ E M Q G +P+ YT L+ G AK G
Sbjct: 464 -------------VDVALRLFE--EMKQRGAKPNVVAYTALISGLAKEG 497
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 111/247 (44%), Gaps = 16/247 (6%)
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS-QANDMASAEGILT 183
+S S ++ +C+ G ++ A ++L+ M ++ +N L+ ++ Q ND AE +L
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAE-VLK 192
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
M G+EP+ TYT L+ G + GD+ +++ +K ++ + + +
Sbjct: 193 EMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAG 252
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII 303
++ A + G+EP+ +TY L+ G+ K G +++ LL + L + II
Sbjct: 253 NVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLL--TDMQLRGVGHNQII 310
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLE-GPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ G+ C + LE +M + G++ TY L CG + M
Sbjct: 311 FNTMIDGY-----------CRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRM 359
Query: 363 DSIRRLL 369
+ ++LL
Sbjct: 360 EDAKKLL 366
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ Y+ + F ++E +G+ P+ TY + L+ +C +G ++ A +
Sbjct: 416 YNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTY------AALVHGHCVNGKVDVALR 469
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ E M+ + + + ALI G ++ A M AGL P Y+ L+
Sbjct: 470 LFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 124/316 (39%), Gaps = 62/316 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+R + + G PN VTY + L++ +C+ G ++
Sbjct: 9 NVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTY------NTLVAAFCRAGELD 62
Query: 142 GATKILEFMRDKTFPISEGV-FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
GA +++ MR++ V FN+++ G +A M A + M + GL P +Y L
Sbjct: 63 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 122
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ GY K G C L + + M+Q GL
Sbjct: 123 LSGYCKVG--------------------CLHESLA---------------VFSEMTQRGL 147
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDE 317
P T+T L+ K G+++ L+AQ G + + +I G ++D+
Sbjct: 148 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKG---FLDD 204
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
L M + G++PS Y L+ GY K G MD R L+ + + V
Sbjct: 205 A------------LLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 252
Query: 378 NGDYLDIIHALAVSGH 393
D + ++ +SG+
Sbjct: 253 KPDV--VTYSTIISGY 266
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 55/283 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN LL Y +++ +G+ P+ VT+ LI + C+ GN+E
Sbjct: 115 DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHAT------CKAGNLE 168
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ MR++ ++E F ALI G + + A + M + G++PS Y L+
Sbjct: 169 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALI 228
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K G MD + I ++ + ++
Sbjct: 229 NGYCKLGRMDLARELIREMEAKR-----------------------------------VK 253
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD-IIHALAVSGHGEYIDEVSA 320
P TY+ ++ GY K G++DS +L + L G D I ++ + G E A
Sbjct: 254 PDVVTYSTIISGYCKVGNLDSAFQL---NQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA 310
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
F N M Q G++P TYT L+ G+ K G+++
Sbjct: 311 CELFEN----------MLQLGVQPDEFTYTTLIDGHCKEGNVE 343
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 41/206 (19%), Positives = 79/206 (38%), Gaps = 28/206 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI---------SNSKLIS 132
D+ Y+ L+ + T L KL + P+ + Y L+ S L+
Sbjct: 360 DVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLK 419
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C G ++ A K+ + M D+ + + V++ LI+GH + ++ A M ++G P
Sbjct: 420 GFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSP 479
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
++ + L+ G + G + I L L +A AE
Sbjct: 480 NSTSTISLVRGLFEEGMVVEADNAIQDL-------------------LTCCPLADAEASK 520
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHG 278
++ E + ++CG A+ G
Sbjct: 521 ALIDLNRKEGNVDALIDVLCGMARDG 546
>gi|387219093|gb|AFJ69255.1| hypothetical protein NGATSA_2006000, partial [Nannochloropsis
gaditana CCMP526]
Length = 479
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 16/214 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTD-FLAKLESQGIEPNRVTYQQLISNSKLISKY 134
E V D+ Y+ LL+ Y E + L ++ G+ PN TY LI Y
Sbjct: 93 EHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEG------Y 146
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G ++ A +LE MR + + L+ +++ D AE IL M + G++ +
Sbjct: 147 VKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANV 206
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM--------- 245
Q +T LM YAK GD++ + + + +E S + S+ M
Sbjct: 207 QVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLA 266
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
A AEG+LT M+ AG P+ T+T LM Y++ GD
Sbjct: 267 AGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGD 300
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 117/291 (40%), Gaps = 65/291 (22%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D +N L+ ++ + +A ++ G+ + VTY QL+ ++G++
Sbjct: 64 DTYTFNTLIAAFVARREVRAAEKMVAYMQEHGVLADVVTYSQLLQGYA-----TKEGDMG 118
Query: 142 GATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A ++LE M RD P S +N LI G+ +A +M AE +L M GL P++ Y L
Sbjct: 119 KAEEVLERMARDGVAPNSY-TYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVL 177
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
M Y + D AE IL M + G+
Sbjct: 178 MDAYTRR-----------------------------------RDARGAEKILDRMKKEGV 202
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID---E 317
+ + Q +T LM YAK GD++ +LA+ + A+A G D
Sbjct: 203 QANVQVFTTLMNAYAKRGDVEGAEGVLAR-------------MLAVAEEEGGGSKDCEPN 249
Query: 318 VSAIVCFVNICFH-----WLEGPM--MSQAGLEPSAQTYTKLMCGYAKHGD 361
V +N+ EG + M+ AG P+ T+T LM Y++ GD
Sbjct: 250 VHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGD 300
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 22/258 (8%)
Query: 110 ESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
E ++PN +TY + L++ Y G++ GA ++L+ M FN LI
Sbjct: 22 EGGNLKPNAITY------NSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAF 75
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA-KHGDMDSIKTKIPSLKPQSELFL 228
++ +AE ++ M + G+ TY++L+ GYA K GDM + + +
Sbjct: 76 VARREVRAAEKMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPN 135
Query: 229 CFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
+++ N LI + + +M AE +L M GL P++ Y LM Y + D +
Sbjct: 136 SYTY---NYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEK 192
Query: 286 LLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
+L + V + + +++A A G E + V A + V E
Sbjct: 193 ILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAV------AEEEGGGSKDC 246
Query: 343 EPSAQTYTKLMCGYAKHG 360
EP+ TY+ LM YA+ G
Sbjct: 247 EPNVHTYSTLMNVYARAG 264
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 89/231 (38%), Gaps = 67/231 (29%)
Query: 72 VHTGELDVPLDI-------------SHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNR 118
V GE+D D+ +Y L+ Y L +++ +G++ N
Sbjct: 147 VKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANV 206
Query: 119 VTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEG-----------VFNALIY 167
+ + L++ Y + G++EGA +L M EG ++ L+
Sbjct: 207 QVF------TTLMNAYAKRGDVEGAEGVLARM--LAVAEEEGGGSKDCEPNVHTYSTLMN 258
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
+++A A AEG+LT M+ AG P+ T+T LM Y++ GD P+
Sbjct: 259 VYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGD------------PE---- 302
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
AE +L M AG+ P+ TY L+ ++ G
Sbjct: 303 -------------------GAELVLKRMEAAGVSPNVLTYNTLLSATSRMG 334
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 48/175 (27%)
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
L+P+A TY L+ Y GDM + + + ++F + ++ +AE
Sbjct: 26 LKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAE 85
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYA-KHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
++ M + G+ TY++L+ GYA K GDM +L +
Sbjct: 86 KMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLER------------------- 126
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
M++ G+ P++ TY L+ GY K G+MD
Sbjct: 127 ----------------------------MARDGVAPNSYTYNYLIEGYVKAGEMD 153
>gi|422294671|gb|EKU21971.1| hypothetical protein NGA_2006000, partial [Nannochloropsis gaditana
CCMP526]
Length = 472
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 16/214 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTD-FLAKLESQGIEPNRVTYQQLISNSKLISKY 134
E V D+ Y+ LL+ Y E + L ++ G+ PN TY LI Y
Sbjct: 86 EHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPNSYTYNYLIEG------Y 139
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G ++ A +LE MR + + L+ +++ D AE IL M + G++ +
Sbjct: 140 VKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANV 199
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM--------- 245
Q +T LM YAK GD++ + + + +E S + S+ M
Sbjct: 200 QVFTTLMNAYAKRGDVEGAEGVLARMLAVAEEEGGGSKDCEPNVHTYSTLMNVYARAGLA 259
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
A AEG+LT M+ AG P+ T+T LM Y++ GD
Sbjct: 260 AGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGD 293
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 117/291 (40%), Gaps = 65/291 (22%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D +N L+ ++ + +A ++ G+ + VTY QL+ ++G++
Sbjct: 57 DTYTFNTLIAAFVARREVRAAEKMVAYMQEHGVLADVVTYSQLLQGYA-----TKEGDMG 111
Query: 142 GATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A ++LE M RD P S +N LI G+ +A +M AE +L M GL P++ Y L
Sbjct: 112 KAEEVLERMARDGVAPNSY-TYNYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVL 170
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
M Y + D AE IL M + G+
Sbjct: 171 MDAYTRR-----------------------------------RDARGAEKILDRMKKEGV 195
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID---E 317
+ + Q +T LM YAK GD++ +LA+ + A+A G D
Sbjct: 196 QANVQVFTTLMNAYAKRGDVEGAEGVLAR-------------MLAVAEEEGGGSKDCEPN 242
Query: 318 VSAIVCFVNICFH-----WLEGPM--MSQAGLEPSAQTYTKLMCGYAKHGD 361
V +N+ EG + M+ AG P+ T+T LM Y++ GD
Sbjct: 243 VHTYSTLMNVYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGD 293
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 112/258 (43%), Gaps = 22/258 (8%)
Query: 110 ESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
E ++PN +TY + L++ Y G++ GA ++L+ M FN LI
Sbjct: 15 EGGNLKPNAITY------NSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAF 68
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA-KHGDMDSIKTKIPSLKPQSELFL 228
++ +AE ++ M + G+ TY++L+ GYA K GDM + + +
Sbjct: 69 VARREVRAAEKMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLERMARDGVAPN 128
Query: 229 CFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
+++ N LI + + +M AE +L M GL P++ Y LM Y + D +
Sbjct: 129 SYTY---NYLIEGYVKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEK 185
Query: 286 LLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
+L + V + + +++A A G E + V A + V E
Sbjct: 186 ILDRMKKEGVQANVQVFTTLMNAYAKRGDVEGAEGVLARMLAV------AEEEGGGSKDC 239
Query: 343 EPSAQTYTKLMCGYAKHG 360
EP+ TY+ LM YA+ G
Sbjct: 240 EPNVHTYSTLMNVYARAG 257
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 89/231 (38%), Gaps = 67/231 (29%)
Query: 72 VHTGELDVPLDI-------------SHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNR 118
V GE+D D+ +Y L+ Y L +++ +G++ N
Sbjct: 140 VKAGEMDWAEDVLERMRTVGLAPTSMNYCVLMDAYTRRRDARGAEKILDRMKKEGVQANV 199
Query: 119 VTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEG-----------VFNALIY 167
+ + L++ Y + G++EGA +L M EG ++ L+
Sbjct: 200 QVF------TTLMNAYAKRGDVEGAEGVLARM--LAVAEEEGGGSKDCEPNVHTYSTLMN 251
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
+++A A AEG+LT M+ AG P+ T+T LM Y++ GD P+
Sbjct: 252 VYARAGLAAGAEGVLTRMTAAGWAPNVITFTTLMTAYSRAGD------------PE---- 295
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
AE +L M AG+ P+ TY L+ ++ G
Sbjct: 296 -------------------GAELVLKRMEAAGVSPNVLTYNTLLSATSRMG 327
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 48/175 (27%)
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
L+P+A TY L+ Y GDM + + + ++F + ++ +AE
Sbjct: 19 LKPNAITYNSLLTAYTNAGDMAGAQQVLKRMVQAGLSPDTYTFNTLIAAFVARREVRAAE 78
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYA-KHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
++ M + G+ TY++L+ GYA K GDM +L +
Sbjct: 79 KMVAYMQEHGVLADVVTYSQLLQGYATKEGDMGKAEEVLER------------------- 119
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
M++ G+ P++ TY L+ GY K G+MD
Sbjct: 120 ----------------------------MARDGVAPNSYTYNYLIEGYVKAGEMD 146
>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
[Vitis vinifera]
gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 131/574 (22%), Positives = 239/574 (41%), Gaps = 66/574 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ L+R Y + + L + S G++PN+V Y LIS+ +C++G E A +
Sbjct: 189 FGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISS------FCREGRNEEAER 242
Query: 146 ILEFMR-DKTFPISEGVFNALIYGHSQANDMASAEGILTMM---SQAGL-EPSAQTYTKL 200
++E MR D FP FN+ I A + A I M + GL P+ T+ +
Sbjct: 243 LVERMREDGLFP-DVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLM 301
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ G+ K G ++ KT + S+K L S+ + L ++ + + A+ L M G+
Sbjct: 302 LEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGI 361
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
EP+ ++ +M G K+G + R ++ SS + D Y ++H +G
Sbjct: 362 EPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGK------ 415
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
V N H M + G P+ T L+ K G + +LL +
Sbjct: 416 ----VLKANNILH-----EMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSY 466
Query: 378 NGDYLD---IIHALAVSGHGEYIDEIISKIQ-PGVGYSADAANHIYHLINKGQIDAAYRI 433
+ D + +I L SG + EI+ + G + N L++ + +
Sbjct: 467 DLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSS-NGKKCL 525
Query: 434 VNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIY-----HLINKGQIDAA 488
+ + S ING L G L K + VG S + IY G+I +A
Sbjct: 526 PDLITYSIIING--LCKAGRLDEARKKFIEM-VGKSLHPDSIIYDTFIHSFCKHGKISSA 582
Query: 489 YRIVNTL-ARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPR--AFN- 544
+R++ + R N + L L+ + NQ I ++ + + ++ + P +N
Sbjct: 583 FRVLKDMEKRGCN---KSLQTYNSLILGLGSKNQ-IFEIYGLLDDMKEKGITPNICTYNN 638
Query: 545 -LAVLIKAHVLKEDYTGAVETFEYC----VNQFRATPWKGELLKRFIQAEDAACLQRITD 599
++ L + +K+ + E + ++ FR L+K F +A D ++ + +
Sbjct: 639 MISCLCEGGRIKDATSLLDEMLQKGISPNISSFRL------LIKAFCKASDFGVVKEVFE 692
Query: 600 LSTSIHGEVNSLYDLMLSFLDAEVLRILQVAEAE 633
++ SI G +LY LM + E+L +V+EA+
Sbjct: 693 IALSICGHKEALYSLMFN----ELLIGGEVSEAK 722
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 23/201 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+L+ F L ++ +GI PN TY +IS C+ G I+ AT
Sbjct: 601 YNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISC------LCEGGRIKDATS 654
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM-MSQAGLEPS--AQTYTKLMC 202
+L+ M K + F LI +A+D + + + +S G + + + + +L+
Sbjct: 655 LLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLI 714
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCF---SFQLTNLLILVSSD--MASAEGILTMMSQ 257
G G++ K + L CF +FQ +L+ + D + +A IL M
Sbjct: 715 G----GEVSEAKELF-----DAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMID 765
Query: 258 AGLEPSAQTYTKLMCGYAKHG 278
G ++ ++ G K G
Sbjct: 766 KGYRFDPASFMPVIDGLGKRG 786
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 136/348 (39%), Gaps = 40/348 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ L+R + + L ++ G+EP+ + L+ C++G+++ A+K
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVF------GCLLDALCKNGSVKEASK 223
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E MR+K FP + F +L+YG + + A+ +L M +AGLEP +T L+ GYA
Sbjct: 224 VFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYA 282
Query: 206 KHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
G M + ++ + C++ L L M A + M + G E
Sbjct: 283 HAGKMADAYDLMNDMRKRGFEPNVNCYTV-LIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVC 323
TYT L+ G+ K G +D +L V + + + E +E
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEE------ 395
Query: 324 FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLD 383
C +E M + G P Y ++ K G++ RL +
Sbjct: 396 ----CLELIEK--MKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE------------ 437
Query: 384 IIHALAVSGHGEYIDEIISKIQ--PGVGYSADAANHIYHLINKGQIDA 429
+ +G +D + I G+ +A NH ++++G A
Sbjct: 438 ----MEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSA 481
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 162/383 (42%), Gaps = 46/383 (12%)
Query: 120 TYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFP--ISEGVFNALIYGHSQANDMAS 177
+Y+ S ++SK Q G + G ++E MR KT P I +F L+ + AN +
Sbjct: 130 SYEVCKSMVMILSKMRQFGAVWG---LIEEMR-KTNPELIEPELFVVLMRRFASANMVKK 185
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
A +L M + GLEP + L+ K+G S+K + E F T+L
Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALCKNG---SVKEASKVFEDMREKFPPNLRYFTSL 242
Query: 238 LI--LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGS 292
L + A+ +L M +AGLEP +T L+ GYA G M L + + G
Sbjct: 243 LYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGF 302
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
Y +I AL + + +DE A+ FV M + G E TYT L
Sbjct: 303 EPNVNCYTVLIQALCRT--EKRMDE--AMRVFVE----------MERYGCEADIVTYTAL 348
Query: 353 MCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVG 409
+ G+ K G +D S+ + + G Y+ I+ A E E+I K++ G
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR-G 407
Query: 410 YSADAANHIYHLINK-----GQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
D IY+++ + G++ A R+ N + NG V F++ T+Q
Sbjct: 408 CHPDLL--IYNVVIRLACKLGEVKEAVRLWNEM----EANGLSPGVDTFVIMINGFTSQ- 460
Query: 465 GVGYSADAANHIYHLINKGQIDA 487
G+ +A NH ++++G A
Sbjct: 461 --GFLIEACNHFKEMVSRGIFSA 481
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 124/317 (39%), Gaps = 66/317 (20%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V D+ Y L+R D + + ++ GIEPN V Y S L+ YC+ G
Sbjct: 146 VRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVY------SSLLQGYCKSG 199
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
E K+ M +K ++ LI + A G++ MM + GLEP+ TY
Sbjct: 200 RWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYN 259
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ K G S+K I G+L MS+
Sbjct: 260 VLINCMCKEG---SVKEAI--------------------------------GVLKKMSEK 284
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ--SGSSLVNGDYL---DIIHALAVSGHGE 313
G+ P TY L+ G + +MD LL + G ++V + + +I L G
Sbjct: 285 GVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMR 344
Query: 314 YIDEVSAIV----CFVN-ICFHWLEGPM---------------MSQAGLEPSAQTYTKLM 353
+V A++ C VN + ++ L G + M+ GLEP + TY+ L+
Sbjct: 345 QAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILI 404
Query: 354 CGYAKHGDMDSIRRLLA 370
G+ K +D LL+
Sbjct: 405 KGFCKMWQVDRAEDLLS 421
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 42/204 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+ L++ + D L+ + +GIEP +L L+ C+ G +E A
Sbjct: 400 YSILIKGFCKMWQVDRAEDLLSTMRDRGIEP------ELFHYIPLLVAMCEQGMMERARN 453
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M D FP+ ++ +I+G +A D+ +A+ +L + GL P A TY+ ++ +A
Sbjct: 454 LFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFA 512
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K GDM++ A G+L M+ +G P
Sbjct: 513 KSGDMEA-----------------------------------ANGVLKQMTASGFLPDVA 537
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ 289
+ L+ GY+ G+++ V L+ +
Sbjct: 538 VFDSLIQGYSTKGEINKVLELIRE 561
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 117/328 (35%), Gaps = 85/328 (25%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-------------- 127
++ YN L+ L K+ +G+ P+ VTY LI
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Query: 128 -----------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
+ +I C G + A ++ M + ++ +N LI G
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+ + + A ++ M+ GLEP + TY+ L+ G+ K +D
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD------------------- 414
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
AE +L+ M G+EP Y L+ + G M+ R L +
Sbjct: 415 ----------------RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM 458
Query: 291 GSS--LVNGDYLDIIHALAVSGHGEYIDE-VSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
++ L Y +IH +G + E + +IV GL P A
Sbjct: 459 DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV----------------DEGLTPDAV 502
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
TY+ ++ +AK GDM++ +L Q +S
Sbjct: 503 TYSIVINMFAKSGDMEAANGVLKQMTAS 530
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 130/323 (40%), Gaps = 69/323 (21%)
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIH 304
A G+L M AG+ TY L+ G ++D L+ + S + + Y ++
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL---MC--GYAK- 358
SG E + +V FV MS+ G+EP YT L +C G AK
Sbjct: 194 GYCKSGRWEDVGKV-----FVE----------MSEKGIEPDVVMYTGLIDSLCKVGKAKK 238
Query: 359 -HGDMDS-IRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAAN 416
HG MD +RR L N + Y +I+ + G + ++ K+ G + D
Sbjct: 239 AHGVMDMMVRRGLEPNVVT-----YNVLINCMCKEGSVKEAIGVLKKMSEK-GVAPDVVT 292
Query: 417 HIYHLINKG-----QIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSAD 471
Y+ + KG ++D A ++ + R NI VK N V +++
Sbjct: 293 --YNTLIKGLSDVLEMDEAMWLLEEMVRGKNI---------------VKPNV--VTFNS- 332
Query: 472 AANHIYHLINKGQIDAAYRIVNTLARSA---NINGEQLPVGGFLVRHMVKTNQPIDKVLA 528
I L + G++ A+++ + + N+ L +GG L H V+ K +
Sbjct: 333 ---VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVR------KAME 383
Query: 529 VCHRLTDENLHPRAFNLAVLIKA 551
+ +T L P +F ++LIK
Sbjct: 384 LMDEMTSLGLEPDSFTYSILIKG 406
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 121/308 (39%), Gaps = 64/308 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+++ Y + FL K+ S G+EP+ VTY + L+ C++G A K
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY------NSLMDYLCKNGRCTEARK 325
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + + L+ G++ + G+L +M + G+ P+ ++ L+C YA
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G +D + L FS M Q GL P
Sbjct: 386 KQGKVD-------------QAMLVFS----------------------KMRQQGLNPDTV 410
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQS-GSSLVNGD--YLDIIHALAVSGHGEYIDE----- 317
TY ++ K G ++ R Q L G+ Y +IH+L + + E
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 318 VSAIVCFVNICF------HWLEG---------PMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ +C I F H EG +M + G++P TY+ L+ GY G M
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530
Query: 363 DSIRRLLA 370
D +LLA
Sbjct: 531 DEATKLLA 538
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 134/339 (39%), Gaps = 69/339 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQG--IEPNRVTYQQLISNSKLISKYCQDGN 139
++ YN LL+ D + + L + G P+ V+Y + +I+ + ++G+
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSY------TTVINGFFKEGD 214
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
++ A M D+ + ++++I +A M A +LT M + G+ P+ +TY
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
++ GY G +P+ A G L M G
Sbjct: 275 IVHGYCSSG------------QPK-----------------------EAIGFLKKMHSDG 299
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
+EP TY LM K+G R++ + + G Y ++ A G +
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA---LV 356
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
E+ ++ +M + G+ P+ ++ L+C YAK G +D + ++
Sbjct: 357 EMHGLL------------DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 377 VNGD---YLDIIHALAVSGHGE----YIDEII-SKIQPG 407
+N D Y +I L SG E Y +++I ++ PG
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 117/295 (39%), Gaps = 30/295 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y ++ + + + ++ + + P + Y LI + + K+ +
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW------D 461
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +++ M D+ + FN++I H + + +E + +M + G++P TY+ L+
Sbjct: 462 KAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 521
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MSQA 258
GY G MD + S+ C ++ N LI ++ E L + M +
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTY---NTLINGYCKISRMEDALVLFREMESS 578
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
G+ P TY ++ G + + + L + +SG+ L Y I+H L
Sbjct: 579 GVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC---KNNLT 635
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
DE A+ F N+C L+ +T+ ++ K G D + L A
Sbjct: 636 DE--ALRMFQNLCL----------TDLQLETRTFNIMIGALLKVGRNDEAKDLFA 678
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 130/316 (41%), Gaps = 59/316 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------ 127
YNAL+ + ++N L + G PN VTY ++I
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 128 -----------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
+ +I YC GN A +IL+ MRD E + LI G + + M
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF-SFQLT 235
SA G+ M GL P+ TYT L+ GY K +D+ + + +K C + Q
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG----CRPNVQTY 568
Query: 236 NLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD----MDSVRRLLA 288
N+LI ++ + AE + +M + G+ P+ TYT ++ G K+G ++ +++
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628
Query: 289 QSG-SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
Q +L+ Y +I AL G E + + F LE + GL P
Sbjct: 629 QGCLPNLLT--YSSLIRALGQEGKVEEAENL----------FAELE-----RHGLIPDEI 671
Query: 348 TYTKLMCGYAKHGDMD 363
TY K++ Y G ++
Sbjct: 672 TYVKMIEAYIMSGKVE 687
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 114/297 (38%), Gaps = 68/297 (22%)
Query: 74 TGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISK 133
TG + D+ Y R+++D ++++G EPN TY + LIS
Sbjct: 324 TGPIIALCDMGCYEDAWRLFVD-------------MKNKGCEPNVYTY------TALISG 364
Query: 134 YCQDGNIEGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
C G ++ A + M RD FP + +NALI + + A +L +M + G P
Sbjct: 365 LCVSGLLKVAIGLFHRMSRDGVFP-NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSP 423
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ TY +++ GY GD + ++ + ++ S + SA IL
Sbjct: 424 NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
+M G +P +YT+L+CG+ K M+S L
Sbjct: 484 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF------------------------N 519
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
E +D+ GL P+ TYT L+ GY K +D+ LL
Sbjct: 520 EMVDD-----------------------GLCPNEVTYTALIDGYCKDEKLDTATSLL 553
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 24/266 (9%)
Query: 99 TFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPIS 158
T + D ++ S+G++PN + Y + +I+ C+DGN+ A I++ + +
Sbjct: 196 TAAVMDRYHRMLSEGVQPNLLIY------NAVINALCKDGNVADAETIMKKVFESEMSPD 249
Query: 159 EGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIP 218
+ ++I GH + +D+ SA + M++ G EP+ TY+ L+ G G ++ I
Sbjct: 250 TFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIR 309
Query: 219 SLKPQSELFLCFSFQLTNLLILVSSDMASAEG---ILTMMSQAGLEPSAQTYTKLMCGYA 275
+ L + T +I + DM E + M G EP+ TYT L+ G
Sbjct: 310 EMILHG--ILPTAHTCTGPIIAL-CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC 366
Query: 276 KHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
G L + L + D + V+ Y ++ +V I + ++
Sbjct: 367 VSG--------LLKVAIGLFHRMSRDGVFPNTVT----YNALINILVENRRIKYAFVVLN 414
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGD 361
+M + G P+ TY +++ GY GD
Sbjct: 415 LMGRNGCSPNIVTYNEMIKGYCILGD 440
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 114/299 (38%), Gaps = 38/299 (12%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E ++ D Y +++ + S ++ +G EPN VTY S LI+ C
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY------STLINGLC 296
Query: 136 QDGNIEGATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEG---ILTMMSQAGLE 191
G + A ++ E + P + +I DM E + M G E
Sbjct: 297 DSGRVNEAFDLIREMILHGILPTAHTCTGPII----ALCDMGCYEDAWRLFVDMKNKGCE 352
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV---SSDMASA 248
P+ TYT L+ G G +K I S + + N LI + + + A
Sbjct: 353 PNVYTYTALISGLCVSG---LLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYA 409
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHA 305
+L +M + G P+ TY +++ GY GD V + Q G S Y II
Sbjct: 410 FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKG 469
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
SG + SA+ +M G +P +YT+L+CG+ K M+S
Sbjct: 470 YCDSG-----NTTSALRIL----------DLMRDGGCKPDEWSYTELICGFCKISKMES 513
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 85/415 (20%), Positives = 162/415 (39%), Gaps = 42/415 (10%)
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234
MA L M+SQ+GL Y+ L+ ++ G ++ + + + +
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220
Query: 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSG 291
+ ++A AE I+ + ++ + P TYT ++ G+ + D+DS ++ +A+ G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280
Query: 292 SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
Y +I+ L SG VN F + ++ G+ P+A T T
Sbjct: 281 CEPNTVTYSTLINGLCDSGR-------------VNEAFDLIREMILH--GILPTAHTCTG 325
Query: 352 LMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI-QPG 407
+ G + RL + G Y +I L VSG + + ++ + G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 408 VGYSADAANHIYH-LINKGQIDAAYRIVNTLAR---SANINGEQLPVGGFLV------RH 457
V + N + + L+ +I A+ ++N + R S NI + G+ +
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 458 MVKTNQPGVGYSADAANHIYHLINKGQID-----AAYRIVNTLARSANINGEQLPVGGFL 512
+V N G+SA+ Y+ I KG D +A RI++ L R ++ L
Sbjct: 446 LVMNNMLQRGHSANLVT--YNTIIKGYCDSGNTTSALRILD-LMRDGGCKPDEWSYTE-L 501
Query: 513 VRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEY 567
+ K ++ ++ + + + D+ L P LI + E A E+
Sbjct: 502 ICGFCKISK-MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 555
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 121/308 (39%), Gaps = 64/308 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+++ Y + FL K+ S G+EP+ VTY + L+ C++G A K
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY------NSLMDYLCKNGRCTEARK 325
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + + L+ G++ + G+L +M + G+ P+ ++ L+C YA
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G +D + L FS M Q GL P
Sbjct: 386 KQGKVD-------------QAMLVFS----------------------KMRQQGLNPDTV 410
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQS-GSSLVNGD--YLDIIHALAVSGHGEYIDE----- 317
TY ++ K G ++ R Q L G+ Y +IH+L + + E
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 318 VSAIVCFVNICF------HWLEG---------PMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ +C I F H EG +M + G++P TY+ L+ GY G M
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530
Query: 363 DSIRRLLA 370
D +LLA
Sbjct: 531 DEATKLLA 538
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 135/339 (39%), Gaps = 69/339 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIE--PNRVTYQQLISNSKLISKYCQDGN 139
++ YN LL+ D + + L + G + P+ V+Y + +I+ + ++G+
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSY------TTVINGFFKEGD 214
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
++ A M D+ + ++++I +A M A +LT M + G+ P+ +TY
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
++ GY G +P+ A G L M G
Sbjct: 275 IVHGYCSSG------------QPK-----------------------EAIGFLKKMHSDG 299
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
+EP TY LM K+G R++ + + G Y ++ A G +
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA---LV 356
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
E+ ++ +M + G+ P+ ++ L+C YAK G +D + ++
Sbjct: 357 EMHGLL------------DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 377 VNGD---YLDIIHALAVSGHGE----YIDEII-SKIQPG 407
+N D Y +I L SG E Y +++I ++ PG
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 116/293 (39%), Gaps = 26/293 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y ++ + + + ++ + + P + Y LI + + K+ +
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW------D 461
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +++ M D+ + FN++I H + + +E + +M + G++P TY+ L+
Sbjct: 462 KAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 521
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMASAEGILTMMSQAGL 260
GY G MD + S+ C ++ L N +S M A + M +G+
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR-MEDALVLFREMESSGV 580
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
P TY ++ G + + + L + +SG+ L Y I+H L DE
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC---KNNLTDE 637
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
A+ F N+C L+ +T+ ++ K G D + L A
Sbjct: 638 --ALRMFQNLCL----------TDLQLETRTFNIMIGALLKVGRNDEAKDLFA 678
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 130/316 (41%), Gaps = 59/316 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------ 127
YNAL+ + ++N L + G PN VTY ++I
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 128 -----------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
+ +I YC GN A +IL+ MRD E + LI G + + M
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF-SFQLT 235
SA G+ M GL P+ TYT L+ GY K +D+ + + +K C + Q
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG----CRPNVQTY 568
Query: 236 NLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD----MDSVRRLLA 288
N+LI ++ + AE + +M + G+ P+ TYT ++ G K+G ++ +++
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628
Query: 289 QSG-SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
Q +L+ Y +I AL G E + + F LE + GL P
Sbjct: 629 QGCLPNLLT--YSSLIRALGQEGKVEEAENL----------FAELE-----RHGLIPDEI 671
Query: 348 TYTKLMCGYAKHGDMD 363
TY K++ Y G ++
Sbjct: 672 TYVKMIEAYIMSGKVE 687
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 114/297 (38%), Gaps = 68/297 (22%)
Query: 74 TGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISK 133
TG + D+ Y R+++D ++++G EPN TY + LIS
Sbjct: 324 TGPIIALCDMGCYEDAWRLFVD-------------MKNKGCEPNVYTY------TALISG 364
Query: 134 YCQDGNIEGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
C G ++ A + M RD FP + +NALI + + A +L +M + G P
Sbjct: 365 LCVSGILKVAIGLFHRMSRDGVFP-NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSP 423
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ TY +++ GY GD + ++ + ++ S + SA IL
Sbjct: 424 NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
+M G +P +YT+L+CG+ K M+S L
Sbjct: 484 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF------------------------N 519
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
E +D+ GL P+ TYT L+ GY K +D+ LL
Sbjct: 520 EMVDD-----------------------GLCPNEVTYTALIDGYCKDEKLDTATSLL 553
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 115/266 (43%), Gaps = 24/266 (9%)
Query: 99 TFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPIS 158
T + D ++ S+G++PN + Y + +I+ C+DGN+ A I++ + +
Sbjct: 196 TAAVMDRYHRMLSEGVQPNLLIY------NAVINALCKDGNVADAETIMKKVFESEMSPD 249
Query: 159 EGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIP 218
+ ++I GH + +D+ SA + M++ G EP+ TY+ L+ G G ++ I
Sbjct: 250 TFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIR 309
Query: 219 SLKPQSELFLCFSFQLTNLLILVSSDMASAEG---ILTMMSQAGLEPSAQTYTKLMCGYA 275
+ L + T +I + DM E + M G EP+ TYT L+ G
Sbjct: 310 EMILHG--ILPTAHTCTGPIIAL-CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC 366
Query: 276 KHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
G + L + +G + + + Y ++ +V I + ++
Sbjct: 367 VSGILKVAIGLFHRMSR---DGVFPNTV---------TYNALINILVENRRIKYAFVVLN 414
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGD 361
+M + G P+ TY +++ GY GD
Sbjct: 415 LMGRNGCSPNIVTYNEMIKGYCILGD 440
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 113/297 (38%), Gaps = 34/297 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E ++ D Y +++ + S ++ +G EPN VTY S LI+ C
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY------STLINGLC 296
Query: 136 QDGNIEGATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEG---ILTMMSQAGLE 191
G + A ++ E + P + +I DM E + M G E
Sbjct: 297 DSGRVNEAFDLIREMILHGILPTAHTCTGPII----ALCDMGCYEDAWRLFVDMKNKGCE 352
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMASAEG 250
P+ TYT L+ G G + + ++ L N+L+ + + A
Sbjct: 353 PNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILV-ENRRIKYAFV 411
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALA 307
+L +M + G P+ TY +++ GY GD V + Q G S Y II
Sbjct: 412 VLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYC 471
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
SG + SA+ +M G +P +YT+L+CG+ K M+S
Sbjct: 472 DSG-----NTTSALRIL----------DLMRDGGCKPDEWSYTELICGFCKISKMES 513
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 85/415 (20%), Positives = 162/415 (39%), Gaps = 42/415 (10%)
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234
MA L M+SQ+GL Y+ L+ ++ G ++ + + + +
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220
Query: 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSG 291
+ ++A AE I+ + ++ + P TYT ++ G+ + D+DS ++ +A+ G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280
Query: 292 SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
Y +I+ L SG VN F + ++ G+ P+A T T
Sbjct: 281 CEPNTVTYSTLINGLCDSGR-------------VNEAFDLIREMILH--GILPTAHTCTG 325
Query: 352 LMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI-QPG 407
+ G + RL + G Y +I L VSG + + ++ + G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG 385
Query: 408 VGYSADAANHIYH-LINKGQIDAAYRIVNTLAR---SANINGEQLPVGGFLV------RH 457
V + N + + L+ +I A+ ++N + R S NI + G+ +
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 458 MVKTNQPGVGYSADAANHIYHLINKGQID-----AAYRIVNTLARSANINGEQLPVGGFL 512
+V N G+SA+ Y+ I KG D +A RI++ L R ++ L
Sbjct: 446 LVMNNMLQRGHSANLVT--YNTIIKGYCDSGNTTSALRILD-LMRDGGCKPDEWSYTE-L 501
Query: 513 VRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEY 567
+ K ++ ++ + + + D+ L P LI + E A E+
Sbjct: 502 ICGFCKISK-MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 555
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 179/436 (41%), Gaps = 46/436 (10%)
Query: 67 EDPFSVHTGEL--DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL 124
+D V T L + LD+ Y L+ V + + ++++ + G+ PN V Y
Sbjct: 316 DDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIY--- 372
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
+ +I YC+ G + A ++ M + + +++LIYG Q + A ++T
Sbjct: 373 ---TSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITK 429
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
M + G+ P TYT L+ G K + D+ ++ + Q+ L Q N+L
Sbjct: 430 MQEDGITPGVITYTTLIQGQCKKHEFDN-AFRLFEMMEQNGLTP--DEQAYNVLTHALCK 486
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLD 301
AE + + + G+ + TYT L+ G++K G+ D L+ + + D Y
Sbjct: 487 SGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSV 546
Query: 302 IIHALA----VSGHGEYIDEVSAIVCFVNICFHWL-------EGPM---------MSQAG 341
++ AL ++ +D+++ NI + + EG M +G
Sbjct: 547 LLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSG 606
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEII 401
+PSA TYT + Y K G ++ L+ + V D + + GH Y+D
Sbjct: 607 HKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAF 666
Query: 402 SKIQPGVGYSADAANHIY-----HLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVR 456
S ++ + S + Y H + +DA Y V+T S N +L L+
Sbjct: 667 STLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHY--VDT---SGMWNWIELDTVWQLLE 721
Query: 457 HMVK--TNQPGVGYSA 470
MVK N V YS+
Sbjct: 722 RMVKHGLNPTAVTYSS 737
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 130/322 (40%), Gaps = 30/322 (9%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
L++ Y L++ L ++ +G+ P+ TY +I YC+ G +
Sbjct: 193 LNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDG------YCKSGRM 246
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A I M + +N LIYG AE +L G P+ T+T +
Sbjct: 247 KDALGIKALMERNGCNPDDWTYNILIYGLC-GEKPDEAEELLNDAIVRGFTPTVITFTNI 305
Query: 201 MCGYAKHGDM-DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
+ GY K + D+++ K L +L L L N+LI + E + M + G
Sbjct: 306 INGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFAN-G 364
Query: 260 LEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
L P+ YT ++ GY K G + + V RL+ G Y +I+ L + +
Sbjct: 365 LAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLI---QDQKLH 421
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNG 373
+ A++ M + G+ P TYT L+ G K + D+ RL + QNG
Sbjct: 422 KAMALI------------TKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNG 469
Query: 374 SSLVNGDYLDIIHALAVSGHGE 395
+ Y + HAL SG E
Sbjct: 470 LTPDEQAYNVLTHALCKSGRAE 491
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 116/286 (40%), Gaps = 23/286 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L + FL + +G+ +VTY + L+ + + GN +
Sbjct: 473 DEQAYNVLTHALCKSGRAEEAYSFLVR---KGVVLTKVTY------TSLVDGFSKAGNTD 523
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++E M ++ ++ L+ + + A IL M+ +G++ + YT ++
Sbjct: 524 FAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIII 583
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
K G D K+ + KP + + F + + AE ++ M
Sbjct: 584 SEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKI-----GQIEEAEHLIGEME 638
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMD----SVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
+ G+ P TY + G G MD +++R++ S ++ + H L +S
Sbjct: 639 RDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVD 698
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+ + S + ++ + W M + GL P+A TY+ ++ G+ K
Sbjct: 699 AHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCK 744
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 135/361 (37%), Gaps = 47/361 (13%)
Query: 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM 185
S + LI C+ + A +L M ++ + LI G + + A +L M
Sbjct: 162 SYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEM 221
Query: 186 SQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTKIPSLKPQSELFLCFSFQLT-NLLI--LV 241
G+ PS TY ++ GY K G M D++ +K E C T N+LI L
Sbjct: 222 PLRGVVPSVWTYNAMIDGYCKSGRMKDAL-----GIKALMERNGCNPDDWTYNILIYGLC 276
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD--- 298
AE +L G P+ T+T ++ GY K +D R+ SS D
Sbjct: 277 GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQA 336
Query: 299 YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
Y +I+ L + E + + F N GL P+ YT ++ GY K
Sbjct: 337 YGVLINVLIKKCRFKEAKETVSEM-FAN--------------GLAPNVVIYTSIIDGYCK 381
Query: 359 HGDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ-----PGV-- 408
G + + + RL+ G Y +I+ L +I+K+Q PGV
Sbjct: 382 VGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVIT 441
Query: 409 ----------GYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHM 458
+ D A ++ ++ + + + N L + +G FLVR
Sbjct: 442 YTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKG 501
Query: 459 V 459
V
Sbjct: 502 V 502
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 84/212 (39%), Gaps = 46/212 (21%)
Query: 105 FLAKLESQGIEPNRVTYQQLISN--------------SKLISKYCQDGNIEGATKILEFM 150
+ ++E G+ P+ VTY I+ ++I C+ + F+
Sbjct: 633 LIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFL 692
Query: 151 R----DKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
+ D + + G++N + ++ + +L M + GL P+A TY+ ++ G+ K
Sbjct: 693 KMSLVDAHYVDTSGMWNWI--------ELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCK 744
Query: 207 HGDM-------DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM---ASAEGILTMMS 256
+ D ++ K + P E++ +LI D+ A +T M
Sbjct: 745 ATRLEEACVLFDHMRGK--DISPNEEIY--------TMLIKCCCDIKLFGKAVSFVTDMI 794
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
+ G +P ++Y L+ G GD D + L
Sbjct: 795 EFGFQPHLESYHYLIVGLCDEGDYDKAKSLFC 826
>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
Length = 1098
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 128/310 (41%), Gaps = 50/310 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+ + +N ++ E + + K++ P+ +TY+ L S YC+ G+++
Sbjct: 523 NTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSG------YCKIGDMD 576
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A++IL + + F + FN+LI GH A IL MS GL P+ Y L+
Sbjct: 577 RASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALI 636
Query: 202 CGYAKHGDMDSI---------KTKIPSLKPQSELFLCF----SFQLTNLLI--LVSSDM- 245
G+ K GD+ + K +P+L S L CF F NL++ LV +DM
Sbjct: 637 AGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMI 696
Query: 246 ----------ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSGS 292
+ ++ + + ++ G K G ++ + LLA G
Sbjct: 697 PDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGF 756
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
N Y +IH + SG FV++ F L M+S GL P+ TY L
Sbjct: 757 VADNFTYSSLIHGCSASG-------------FVDVAFD-LRDTMLS-VGLTPNIVTYNSL 801
Query: 353 MCGYAKHGDM 362
+ G K G++
Sbjct: 802 IYGLCKSGEL 811
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 135/331 (40%), Gaps = 52/331 (15%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY-------------- 121
++ V +++ Y+A++ Y + T L L +G PN VTY
Sbjct: 271 KMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNME 330
Query: 122 ------QQLISNSKL----------ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
Q++ N +L I+ YCQ G +E A ++L M D ++ V+N +
Sbjct: 331 EAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIM 390
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD-SIKTKIPSLKPQ- 223
I G+ + M A IL M+ G+ P +Y L+ GY K G M+ + +T L+
Sbjct: 391 INGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGF 450
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ L ++ L L S D A + +M + G+ P+ + + L+ G+ K G +
Sbjct: 451 AATTLTYNALLKGFCSLGSID--DALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKA 508
Query: 284 RRLLAQS---GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
L ++ G + + +I+ L E + E +V M Q
Sbjct: 509 LNLWKETLARGLAKNTTTFNTVINGLC---KIERMPEAEELV------------DKMKQW 553
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
P TY L GY K GDMD R+L +
Sbjct: 554 RCPPDIITYRTLFSGYCKIGDMDRASRILNE 584
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 108/487 (22%), Positives = 177/487 (36%), Gaps = 94/487 (19%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNALL+ + + +GI PN IS S L+ + + G E A
Sbjct: 457 YNALLKGFCSLGSIDDALRLWFLMLKKGIAPNE------ISCSTLLDGFFKSGKTEKALN 510
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + + + FN +I G + M AE ++ M Q P TY L GY
Sbjct: 511 LWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYC 570
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEP 262
K GDMD + L+ L + + N LI ++ IL MS GL P
Sbjct: 571 KIGDMDRASRILNELE---NLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSP 627
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
+ Y L+ G+ K GD+ + L YL++I
Sbjct: 628 NTVAYGALIAGWCKEGDLHTAYNL------------YLEMI------------------- 656
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL 382
+ GL P+ + L+ + + G D L+ QN LV D +
Sbjct: 657 ----------------EKGLVPNLFICSSLVSCFYRKGKFDEAN-LVLQN---LVGTDMI 696
Query: 383 DIIHA--LAVSGHGEYIDEII------SKIQPGV--------GYSADAANHIYHLINKGQ 426
I A L + +ID + +KI + G DA N + L +KG
Sbjct: 697 PDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKG- 755
Query: 427 IDAAYRIVNTLARSANINGEQLPVGGFL-VRHMVKTNQPGVGYSADAANH---IYHLINK 482
+ + S+ I+G GF+ V ++ VG + + + IY L
Sbjct: 756 -----FVADNFTYSSLIHG--CSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKS 808
Query: 483 GQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRA 542
G++ A + L + I+ + + +H + I + + R+ +E +HP
Sbjct: 809 GELSRAVSLFKKLW-TKGISPNAITYNTLIDKHC--KDGYITEAFKLKQRMIEEGIHPTV 865
Query: 543 FNLAVLI 549
F ++LI
Sbjct: 866 FTYSILI 872
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN+L+ + KL ++GI PN +TY + LI K+C+DG I
Sbjct: 794 NIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITY------NTLIDKHCKDGYIT 847
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ + M ++ + ++ LI G M A +L M + ++P+ TY L+
Sbjct: 848 EAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLI 907
Query: 202 CGYAKHGDMD 211
GY + +D
Sbjct: 908 QGYVRCESVD 917
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 79/197 (40%), Gaps = 41/197 (20%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ LA L+ +G + TY LI G ++ A + + M + +N
Sbjct: 746 NLLADLKDKGFVADNFTYSSLIHGCS------ASGFVDVAFDLRDTMLSVGLTPNIVTYN 799
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
+LIYG ++ +++ A + + G+ P+A TY L+ + K G
Sbjct: 800 SLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDG--------------- 844
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
++ +F+L +I + G+ P+ TY+ L+ G G M+
Sbjct: 845 ---YITEAFKLKQRMI-----------------EEGIHPTVFTYSILINGLCTQGYMEEA 884
Query: 284 RRLLAQSGSSLVNGDYL 300
+LL Q + V+ +Y+
Sbjct: 885 IKLLDQMIENNVDPNYV 901
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 103/270 (38%), Gaps = 35/270 (12%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT---FPISEGVFNA 164
+++ G P++ T + + YC+ ++G LEF+ + T ++ ++A
Sbjct: 233 QMQRAGALPDKFTV------AIMAKAYCK---VKGVVHALEFVEEMTKMGVEVNLVAYHA 283
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
++ G+ + A +L + G P+ TYT L+ GY +M+ + + ++
Sbjct: 284 VMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNK 343
Query: 225 ELFL---CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
+L + F + + M A +L M + L+ + Y ++ GY K G M
Sbjct: 344 QLVVDEAVFGAVINGYCQM--GRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMV 401
Query: 282 SVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
+L + V D Y ++ G +N F M
Sbjct: 402 EAHNILHEMTGVGVRPDTYSYNSLVDGYCKKG-------------LMNKAFETYN--TML 446
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
+ G + TY L+ G+ G +D RL
Sbjct: 447 RNGFAATTLTYNALLKGFCSLGSIDDALRL 476
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 136/348 (39%), Gaps = 40/348 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ L+R + + L ++ G+EP+ + L+ C++G+++ A+K
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVF------GCLLDALCKNGSVKEASK 223
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E MR+K FP + F +L+YG + + A+ +L M +AGLEP +T L+ GYA
Sbjct: 224 VFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYA 282
Query: 206 KHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
G M + ++ + C++ L L M A + M + G E
Sbjct: 283 HAGKMADAYDLMNDMRKRGFEPNVNCYTV-LIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVC 323
TYT L+ G+ K G +D +L V + + + E +E
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEE------ 395
Query: 324 FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLD 383
C +E M + G P Y ++ K G++ RL +
Sbjct: 396 ----CLELIEK--MKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNE------------ 437
Query: 384 IIHALAVSGHGEYIDEIISKIQ--PGVGYSADAANHIYHLINKGQIDA 429
+ +G +D + I G+ +A NH ++++G A
Sbjct: 438 ----MEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSA 481
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 159/380 (41%), Gaps = 40/380 (10%)
Query: 120 TYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFP--ISEGVFNALIYGHSQANDMAS 177
+Y+ S ++SK Q G + G ++E MR KT P I +F L+ + AN +
Sbjct: 130 SYEVCKSMVMILSKMRQFGAVWG---LIEEMR-KTNPELIEPELFVVLMRRFASANMVKK 185
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
A +L M + GLEP + L+ K+G S+K + E F T+L
Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALCKNG---SVKEASKVFEDMREKFPPNLRYFTSL 242
Query: 238 LI--LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGS 292
L + A+ +L M +AGLEP +T L+ GYA G M L + + G
Sbjct: 243 LYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGF 302
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
Y +I AL + + +DE A+ FV M + G E TYT L
Sbjct: 303 EPNVNCYTVLIQALCRT--EKRMDE--AMRVFVE----------MERYGCEADIVTYTAL 348
Query: 353 MCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ-PGV 408
+ G+ K G +D S+ + + G Y+ I+ A E E+I K++ G
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC 408
Query: 409 GYSADAANHIYHLINK-GQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVG 467
N + L K G++ A R+ N + NG V F++ T+Q G
Sbjct: 409 HPDLLIYNVVIRLACKLGEVKEAVRLWNEM----EANGLSPGVDTFVIMINGFTSQ---G 461
Query: 468 YSADAANHIYHLINKGQIDA 487
+ +A NH ++++G A
Sbjct: 462 FLIEACNHFKEMVSRGIFSA 481
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 131/306 (42%), Gaps = 41/306 (13%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS ++ LM GY + GD+D
Sbjct: 132 YPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+KT + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKTAMHASGVQPDVY-TYSVLINGL--CKESKMDDANELFDEMLDKGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+++ R+ + Q L + Y
Sbjct: 302 ------------MSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGY 349
Query: 382 LDIIHALAVSGHGEYID-EIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
+I L G Y+D E + + VG D + I KG + +++ +
Sbjct: 350 TALISGLC--QEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEM 407
Query: 438 ARSANI 443
R +
Sbjct: 408 QRDGQM 413
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+++ + ++ + + AE +L M GL+
Sbjct: 319 DGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLK 378
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ + K GD+ + +LL +
Sbjct: 379 PDTITYTMIINEFCKKGDVWTGSKLLKE 406
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 120/299 (40%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M ++ LI G + + M A + M GL P+
Sbjct: 183 RLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+++ R+ + Q L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLC--QEG 360
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
Y+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 361 RYLDAEKVL-------------REMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKE 406
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 161/378 (42%), Gaps = 43/378 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y ++ N+H + ++E++GI PN VTY S LIS C G A++
Sbjct: 259 YTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTY------SSLISCLCNYGRWSDASR 312
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M ++ F+ALI + + AE + M + ++PS TY+ L+ G+
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFS--FQLTNLLILVSSDMASAEG--ILTMMSQAGLE 261
H +D K + + CF + L+ EG + MSQ GL
Sbjct: 373 MHDRLDEAKQMFEFMVSKH----CFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH------- 311
+ TYT L+ G + GD D + + + S V + Y ++ L +G
Sbjct: 429 GNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Query: 312 GEYI--DEVSAIVCFVNICFH-----------WLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
EY+ ++ + NI W +S G++P Y ++ G+ +
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 359 HG---DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA 415
G + D++ + + ++G+ +G Y +I A G E E+I +++ G++ DA+
Sbjct: 549 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR-SCGFAGDAS 607
Query: 416 N--HIYHLINKGQIDAAY 431
+ ++++ G++D ++
Sbjct: 608 TIGLVTNMLHDGRLDKSF 625
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 114/305 (37%), Gaps = 42/305 (13%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L +P + Y+ L+ + L K+ G EPN VT S L++ YC
Sbjct: 110 LGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTL------SSLLNGYCH 163
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
I A +++ M + + FN LI+G N + A ++ M G +P T
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVT 223
Query: 197 YTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
Y ++ G K GD D K + L+P ++ L + M A +
Sbjct: 224 YGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCK-----NKHMDDALNL 278
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAV 308
M G+ P+ TY+ L+ +G RLL+ +N D + +I A
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 309 SGH----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
G + DE M + ++PS TY+ L+ G+ H +D
Sbjct: 339 EGKLVEAEKLYDE-------------------MVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 365 IRRLL 369
+++
Sbjct: 380 AKQMF 384
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 101/271 (37%), Gaps = 34/271 (12%)
Query: 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEG 180
+ +I SKL+S + + + E M++ P + ++ LI + + + A
Sbjct: 78 FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALA 137
Query: 181 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLT 235
+L M + G EP+ T + L+ GY + + + +P + F
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF-------- 189
Query: 236 NLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
N LI + + + A ++ M G +P TY ++ G K GD D LL +
Sbjct: 190 NTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQ 249
Query: 293 SLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY 349
+ Y II L + H + A+ F M G+ P+ TY
Sbjct: 250 GKLEPGVLIYTTIIDGLCKNKHMD-----DALNLFKE----------METKGIRPNVVTY 294
Query: 350 TKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD 380
+ L+ +G RLL+ +N D
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPD 325
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 129/316 (40%), Gaps = 59/316 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------ 127
YNAL+ + ++N L + G PN VTY ++I
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 128 -----------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
+ +I YC GN A +IL+ MRD E + LI G + + M
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF-SFQLT 235
SA G+ M GL P+ TYT L+ GY K +D+ + + +K C + Q
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG----CRPNVQTY 568
Query: 236 NLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD----MDSVRRLLA 288
N+LI ++ + AE + +M + G+ P+ TYT ++ G K+G ++ +++
Sbjct: 569 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 628
Query: 289 QSGSSLVN-GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
Q L N Y +I AL G E + + F LE + GL P
Sbjct: 629 Q--GCLPNLLTYSSLIRALGQEGKVEEAENL----------FAELE-----RHGLIPDEI 671
Query: 348 TYTKLMCGYAKHGDMD 363
TY K++ Y G ++
Sbjct: 672 TYVKMIEAYIMSGKVE 687
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 114/297 (38%), Gaps = 68/297 (22%)
Query: 74 TGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISK 133
TG + D+ Y R+++D ++++G EPN TY + LIS
Sbjct: 324 TGPIIALCDMGCYEDAWRLFVD-------------MKNKGCEPNVYTY------TALISG 364
Query: 134 YCQDGNIEGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
C G ++ A + M RD FP + +NALI + + A +L +M + G P
Sbjct: 365 LCVSGLLKVAIGLFHRMSRDGVFP-NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSP 423
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ TY +++ GY GD + ++ + ++ S + SA IL
Sbjct: 424 NIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRIL 483
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
+M G +P +YT+L+CG+ K M+S L
Sbjct: 484 DLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF------------------------N 519
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
E +D+ GL P+ TYT L+ GY K +D+ LL
Sbjct: 520 EMVDD-----------------------GLCPNEVTYTALIDGYCKDEKLDTATSLL 553
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 24/279 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+ALL T + D ++ S+G++PN + Y + +I+ C+DGN+ A
Sbjct: 183 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIY------NAVINALCKDGNVADAET 236
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I++ + + + ++I GH + +D+ SA + M++ G EP+ TY+ L+ G
Sbjct: 237 IMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLC 296
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MSQAGLEP 262
G ++ I + L + T +I + DM E + M G EP
Sbjct: 297 DSGRVNEAFDLIREMILHG--ILPTAHTCTGPIIAL-CDMGCYEDAWRLFVDMKNKGCEP 353
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
+ TYT L+ G G L + L + D + V+ Y ++ +V
Sbjct: 354 NVYTYTALISGLCVSG--------LLKVAIGLFHRMSRDGVFPNTVT----YNALINILV 401
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
I + ++ +M + G P+ TY +++ GY GD
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 114/299 (38%), Gaps = 38/299 (12%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E ++ D Y +++ + S ++ +G EPN VTY S LI+ C
Sbjct: 243 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY------STLINGLC 296
Query: 136 QDGNIEGATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM---MSQAGLE 191
G + A ++ E + P + +I DM E + M G E
Sbjct: 297 DSGRVNEAFDLIREMILHGILPTAHTCTGPII----ALCDMGCYEDAWRLFVDMKNKGCE 352
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV---SSDMASA 248
P+ TYT L+ G G +K I S + + N LI + + + A
Sbjct: 353 PNVYTYTALISGLCVSG---LLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYA 409
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHA 305
+L +M + G P+ TY +++ GY GD V + Q G S Y II
Sbjct: 410 FVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKG 469
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
SG + SA+ +M G +P +YT+L+CG+ K M+S
Sbjct: 470 YCDSG-----NTTSALRIL----------DLMRDGGCKPDEWSYTELICGFCKISKMES 513
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 85/415 (20%), Positives = 162/415 (39%), Gaps = 42/415 (10%)
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234
MA L M+SQ+GL Y+ L+ ++ G ++ + + + +
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 220
Query: 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSG 291
+ ++A AE I+ + ++ + P TYT ++ G+ + D+DS ++ +A+ G
Sbjct: 221 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 280
Query: 292 SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
Y +I+ L SG VN F + ++ G+ P+A T T
Sbjct: 281 CEPNTVTYSTLINGLCDSGR-------------VNEAFDLIREMILH--GILPTAHTCTG 325
Query: 352 LMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI-QPG 407
+ G + RL + G Y +I L VSG + + ++ + G
Sbjct: 326 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 385
Query: 408 VGYSADAANHIYH-LINKGQIDAAYRIVNTLAR---SANINGEQLPVGGFLV------RH 457
V + N + + L+ +I A+ ++N + R S NI + G+ +
Sbjct: 386 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAM 445
Query: 458 MVKTNQPGVGYSADAANHIYHLINKGQID-----AAYRIVNTLARSANINGEQLPVGGFL 512
+V N G+SA+ Y+ I KG D +A RI++ L R ++ L
Sbjct: 446 LVMNNMLQRGHSANLVT--YNTIIKGYCDSGNTTSALRILD-LMRDGGCKPDEWSYTE-L 501
Query: 513 VRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEY 567
+ K ++ ++ + + + D+ L P LI + E A E+
Sbjct: 502 ICGFCKISK-MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 555
>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Brachypodium distachyon]
Length = 904
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 24/280 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D + YN L+ + + L K++ + ++P+ ++ +I + G+++
Sbjct: 513 DRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEG------FAVAGDMK 566
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A IL+ MR + +NALI+G + N + A +L MS AG+ P+ TYT +M
Sbjct: 567 RALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIM 626
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYA +GD+ +K + ++ S M SA + MS +
Sbjct: 627 RGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIA 686
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
+ Y L+ G+A+ GD+ L+ Q V + Y I+A +G + +V
Sbjct: 687 RNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKV 746
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
M+ GL+P+ +TYT L+ G+AK
Sbjct: 747 IE---------------EMADVGLKPNLKTYTTLIKGWAK 771
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 111/282 (39%), Gaps = 64/282 (22%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G++P+R Y LI +C+ GN++ A +ILE M+ + S F +I G + A
Sbjct: 509 GLQPDRAIYNLLIE------AFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVA 562
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
DM A IL +M ++G P+ TY L+ G K ++
Sbjct: 563 GDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVER-------------------- 602
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
A +L MS AG+ P+ TYT +M GYA +GD+ +
Sbjct: 603 ---------------AVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKE 647
Query: 293 SLVNGD---YLDIIHALAVSGHGEYIDEVS--------AIVCFV-NICFH--------WL 332
+ D Y ++ A SG + V+ A FV NI W
Sbjct: 648 GGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWE 707
Query: 333 EGPMMSQA---GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+M Q G+ P+ TYT + K GDM ++++ +
Sbjct: 708 AADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEE 749
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 53/242 (21%)
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
+IS LI+ Y + G + A I + M + ++ LI G +D A+A I
Sbjct: 444 IISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFE 503
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
M ++GL+P Y L+ + K G+MD
Sbjct: 504 EMLKSGLQPDRAIYNLLIEAFCKMGNMD-------------------------------- 531
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYL 300
A IL M + ++PS + + ++ G+A GDM ++ L+ +SG + Y
Sbjct: 532 ---RAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYN 588
Query: 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+IH L ++V V +N MS AG+ P+ TYT +M GYA +G
Sbjct: 589 ALIHGLIKK------NQVERAVSVLN---------KMSIAGITPNEHTYTIIMRGYAANG 633
Query: 361 DM 362
D+
Sbjct: 634 DI 635
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 138/340 (40%), Gaps = 34/340 (10%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G+ A E MR + + VF +L++ ++ A DM + M G
Sbjct: 275 MIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEG 334
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMAS 247
+E + TY+ ++ G+AK D S K ++L +N++ S +M
Sbjct: 335 IELTIVTYSIIIAGFAKINDAQSADNLFKEAK--AKLGDLNGIIYSNIIHAHCQSGNMDR 392
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSSLVN 296
AE ++ M + G++ Y +M GY D + + S L+N
Sbjct: 393 AEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLIN 452
Query: 297 GDYLDI---IHALAVSGHGE----------YIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
Y+ I A+A+S E Y +S + + + M ++GL+
Sbjct: 453 L-YIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQ 511
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV---NGDYLDIIHALAVSGHGEYIDEI 400
P Y L+ + K G+MD R+L + + N + II AV+G + I
Sbjct: 512 PDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNI 571
Query: 401 ISKI-QPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLA 438
+ + + G + N + H LI K Q++ A ++N ++
Sbjct: 572 LDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMS 611
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + + D + +++ G+ PN TY + I+ C+ G+++ A K
Sbjct: 692 YNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTY------TSYINACCKAGDMQRAQK 745
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
++E M D + + LI G ++A+ A M AGL+P Y
Sbjct: 746 VIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPDEAAY 797
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 73/198 (36%), Gaps = 53/198 (26%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
F +I +++ D A M G+EP+A +T L+ YA
Sbjct: 272 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYA---------------- 315
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
V+ DM + M G+E + TY+ ++ G+AK D
Sbjct: 316 -------------------VARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQ 356
Query: 282 SVRRLLAQSGSSL--VNG-DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
S L ++ + L +NG Y +IIHA SG+ + +E+ M
Sbjct: 357 SADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVR---------------EME 401
Query: 339 QAGLEPSAQTYTKLMCGY 356
+ G++ Y +M GY
Sbjct: 402 EDGIDAPIDAYHSMMHGY 419
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 124/317 (39%), Gaps = 66/317 (20%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V D+ Y L+R D + + ++ GIEPN V Y S L+ YC+ G
Sbjct: 146 VRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVY------SSLLQGYCKSG 199
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
E K+ M +K ++ LI + A G++ MM + GLEP+ TY
Sbjct: 200 RWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYN 259
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ K G S+K I G+L MS+
Sbjct: 260 VLINCMCKEG---SVKEAI--------------------------------GVLKKMSEK 284
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ--SGSSLVNGDYL---DIIHALAVSGHGE 313
G+ P TY L+ G + +MD LL + G ++V + + +I L G
Sbjct: 285 GVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMR 344
Query: 314 YIDEVSAIV----CFVN-ICFHWLEGPM---------------MSQAGLEPSAQTYTKLM 353
+V A++ C VN + ++ L G + M+ GLEP + TY+ L+
Sbjct: 345 QAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILI 404
Query: 354 CGYAKHGDMDSIRRLLA 370
G+ K +D LL+
Sbjct: 405 KGFCKMWQVDRAEDLLS 421
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 42/204 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+ L++ + D L+ + +GIEP +L L+ C+ G +E A
Sbjct: 400 YSILIKGFCKMWQVDRAEDLLSTMRDRGIEP------ELFHYIPLLVAMCEQGMMERARN 453
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M D FP+ ++ +I+G +A D+ +A+ +L + GL P A TY+ ++ +A
Sbjct: 454 LFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFA 512
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K GDM++ A G+L M+ +G P
Sbjct: 513 KSGDMEA-----------------------------------ANGVLKQMTASGFLPDVA 537
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ 289
+ L+ GY+ G+++ V L+ +
Sbjct: 538 VFDSLIQGYSTKGEINKVLELIRE 561
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 118/326 (36%), Gaps = 81/326 (24%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-------------- 127
++ YN L+ L K+ +G+ P+ VTY LI
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313
Query: 128 -----------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
+ +I C G + A ++ M + ++ +N LI G
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+ + + A ++ M+ GLEP + TY+ L+ G+ K +D
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD------------------- 414
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
AE +L+ M G+EP Y L+ + G M+ R L
Sbjct: 415 ----------------RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLF--- 455
Query: 291 GSSLVNGDYLDII-HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY 349
+ + N LD++ ++ + G + D +A +I GL P A TY
Sbjct: 456 -NEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV----------DEGLTPDAVTY 504
Query: 350 TKLMCGYAKHGDMDSIRRLLAQNGSS 375
+ ++ +AK GDM++ +L Q +S
Sbjct: 505 SIVINMFAKSGDMEAANGVLKQMTAS 530
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 130/323 (40%), Gaps = 69/323 (21%)
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIH 304
A G+L M AG+ TY L+ G ++D L+ + S + + Y ++
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL---MC--GYAK- 358
SG E + +V FV MS+ G+EP YT L +C G AK
Sbjct: 194 GYCKSGRWEDVGKV-----FVE----------MSEKGIEPDVVMYTGLIDSLCKVGKAKK 238
Query: 359 -HGDMDS-IRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAAN 416
HG MD +RR L N + Y +I+ + G + ++ K+ G + D
Sbjct: 239 AHGVMDMMVRRGLEPNVVT-----YNVLINCMCKEGSVKEAIGVLKKMSEK-GVAPDVVT 292
Query: 417 HIYHLINKG-----QIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSAD 471
Y+ + KG ++D A ++ + R NI VK N V +++
Sbjct: 293 --YNTLIKGLSDVLEMDEAMWLLEEMVRGKNI---------------VKPNV--VTFNS- 332
Query: 472 AANHIYHLINKGQIDAAYRIVNTLARSA---NINGEQLPVGGFLVRHMVKTNQPIDKVLA 528
I L + G++ A+++ + + N+ L +GG L H V+ K +
Sbjct: 333 ---VIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVR------KAME 383
Query: 529 VCHRLTDENLHPRAFNLAVLIKA 551
+ +T L P +F ++LIK
Sbjct: 384 LMDEMTSLGLEPDSFTYSILIKG 406
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 149/326 (45%), Gaps = 39/326 (11%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S LI + ++G+I+ +I + M PI+ +N LI+G + M A IL M
Sbjct: 248 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT 307
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
G +P+++T+ L+ GY + +M + ++ ++ + S+ + D++
Sbjct: 308 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 367
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIH 304
A +L M+ +GL+P+ Y+ L+ GYA G ++ RRLL S V D Y II
Sbjct: 368 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 427
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
L+ +G ++E S + LE + GL+P A T+ + GY+K G M
Sbjct: 428 CLSKAGK---MEEAST---------YLLE---IQGRGLKPDAVTFGAFILGYSKTGKMTE 472
Query: 365 IRR---------LLAQNG--SSLVNGDYL--DIIHALAVSGHGEYIDEIISKIQPGVGYS 411
+ L+ N + L+NG + +++ AL++ H + ++ +Q +
Sbjct: 473 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG-VLPDVQTCSAF- 530
Query: 412 ADAANHIYHLINKGQIDAAYRIVNTL 437
I+ L+ G++ A ++ + L
Sbjct: 531 ------IHGLLKNGRVQEALKVFSEL 550
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 37/312 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P+++ YN L+ + L + + G +PN T+ LI YC++
Sbjct: 275 IPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTF------CLLIEGYCREH 328
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A ++L+ M + S + A+I G D++ A +L M+ +GL+P+ Y+
Sbjct: 329 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 388
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ GYA G ++ + + + F + + + M A L +
Sbjct: 389 TLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 448
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS-----------GSSLVNGDYL--DIIHA 305
GL+P A T+ + GY+K G M + + + L+NG + +++ A
Sbjct: 449 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA 508
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPM--------------MSQAGLEPSAQTYTK 351
L++ H + ++ V C ++ G + + + GL P TY+
Sbjct: 509 LSIFRHLHAL----GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 564
Query: 352 LMCGYAKHGDMD 363
L+ G+ K G+++
Sbjct: 565 LISGFCKQGEVE 576
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 135/327 (41%), Gaps = 33/327 (10%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H L V D+ +A + L N ++L+ +G+ P+ TY S LIS
Sbjct: 514 HLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY------SSLIS 567
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C+ G +E A ++ + M K + ++NAL+ G ++ D+ A + M + GLEP
Sbjct: 568 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 627
Query: 193 SAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMA 246
+ TY+ ++ GY K ++ S+ ++PS Q F + N L+ DM
Sbjct: 628 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF------VYNALVHGCCKEGDME 681
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
A + M Q G + ++ L+ GY K + +L + + + D++ +
Sbjct: 682 KAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 740
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
++E N+ F M + L TYT LM GY K G +
Sbjct: 741 DWHCKAGKMEE-------ANLLFKE-----MQERNLIVDTVTYTSLMYGYNKLGQSSEVF 788
Query: 367 RLLAQNGSSLVNGDYLDIIHALAVSGH 393
L + + V D ++ + L + H
Sbjct: 789 ALFEKMVAKGVKPD--EVTYGLVIYAH 813
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 117/288 (40%), Gaps = 50/288 (17%)
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
L M +K + + + G +A M A+ M + GL+P + L+ G+ +
Sbjct: 197 LRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 256
Query: 207 HGDMDSIKTKIPSLKPQSELFLC-FSFQLTNLLILVS-----SDMASAEGILTMMSQAGL 260
GD+D + L+ + + C L +L+ M A IL M G
Sbjct: 257 EGDIDEV------LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGC 310
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLL-----------AQSGSSLVNGDYLDIIHALAVS 309
+P+++T+ L+ GY + +M LL A S +++NG + H +S
Sbjct: 311 KPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMING----LCHCKDLS 366
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ +++ M+ +GL+P+ Y+ L+ GYA G ++ RRLL
Sbjct: 367 LANKLLEK-------------------MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLL 407
Query: 370 AQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADA 414
S V D Y II L+ +G E + +IQ G G DA
Sbjct: 408 DGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ-GRGLKPDA 454
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N L+ Y + + ++ ++ I P+ VTY + +I +C+ G +E A
Sbjct: 701 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY------TTVIDWHCKAGKMEEANL 754
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M+++ + + +L+YG+++ + + M G++P TY ++ +
Sbjct: 755 LFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 814
Query: 206 KHGDMDSIKTKIPSLKPQSELF---LCFSFQLTNLLILV---SSDMASAEGILTMMSQAG 259
K ++ + + K + E+ + + +LLI D+ A +L M + G
Sbjct: 815 KEDNL------VEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 868
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
L+PS + L+ + + G MD R+
Sbjct: 869 LKPSLAACSTLVRSFHEAGKMDEATRVF 896
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 112/313 (35%), Gaps = 34/313 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YNAL+ + + +G+EP+ VTY S +I YC+ N+
Sbjct: 593 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTY------STMIDGYCKSENVA 646
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M K V+NAL++G + DM A + M Q G + ++ L+
Sbjct: 647 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLI 705
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K + + + + ++ + M A + M + L
Sbjct: 706 DGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI 765
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE-------- 313
TYT LM GY K G V L + + V D ++ + L + H +
Sbjct: 766 VDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPD--EVTYGLVIYAHCKEDNLVEAF 823
Query: 314 -YIDEVSAIVCFVNICFHWL------------EGPM----MSQAGLEPSAQTYTKLMCGY 356
DEV H L E M + GL+PS + L+ +
Sbjct: 824 KLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSF 883
Query: 357 AKHGDMDSIRRLL 369
+ G MD R+
Sbjct: 884 HEAGKMDEATRVF 896
>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
Length = 573
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 66/286 (23%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ +N L+ Y + + ++ GI N VTY L+S C++G +E
Sbjct: 260 NVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSG------LCREGKVE 313
Query: 142 GATKILEFMRD---KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ K++E M + T P N+++ G + M AEG + M+Q G++P+ TY
Sbjct: 314 DSMKLVEEMEELGLATLP----TLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYN 369
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ GY + G M + +A+G M+
Sbjct: 370 TLIDGYQRLGKM--------------------------------KEATAAKGA---MAGK 394
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
G+ P +TY L+ G+ D SV LL + + V D Y +I AL G
Sbjct: 395 GISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKG----- 449
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
EV V ++ M + GLEP +TY ++ G+ + GD
Sbjct: 450 -EVRKAVKLLD---------EMVEVGLEPKHRTYNAIINGFCEKGD 485
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 121/295 (41%), Gaps = 43/295 (14%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
FN +I G + + A + M GL PS TY L+ GY K G + LK
Sbjct: 191 FNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLK 250
Query: 222 PQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
++ + + N+LI S++ +A + M Q G+ + TYT L+ G + G
Sbjct: 251 EMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREG 310
Query: 279 DMDSVRRLLAQ----------SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNIC 328
++ +L+ + + +S++NG + V G
Sbjct: 311 KVEDSMKLVEEMEELGLATLPTLNSVLNG---FCKKGMMVEAEG---------------- 351
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDII 385
W++G M+Q G++P+ TY L+ GY + G M + + +A G S Y +I
Sbjct: 352 --WVDG--MAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLI 407
Query: 386 HALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
S + ++ +++ G AD + I L KG++ A ++++ +
Sbjct: 408 TGFTTSTDWRSVSGLLDEMKE-TGVKADLVTYNVLIGALCCKGEVRKAVKLLDEM 461
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 6/130 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ + + S + L +++ G++ + VTY LI C G +
Sbjct: 399 DVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNV------LIGALCCKGEVR 452
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+L+ M + +NA+I G + D A I M + + T +
Sbjct: 453 KAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFL 512
Query: 202 CGYAKHGDMD 211
+ K G MD
Sbjct: 513 KYFCKMGKMD 522
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 172/419 (41%), Gaps = 45/419 (10%)
Query: 33 GALGAFLVLLVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGEL--DVPLDISHYNALL 90
GA+ V+ F L + +C + +D V + + + LD+ Y L+
Sbjct: 378 GAIARGFTPTVITFTNLINGYCKAERI-------DDALRVKSNMISSNCKLDLQAYGVLI 430
Query: 91 RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFM 150
V + + L ++ + G+ PN VTY + +I YC+ G + A ++ + M
Sbjct: 431 NVLIKKCRLKEAKETLNEMFANGLAPNVVTY------TSIIDGYCKVGMVGAALEVFKLM 484
Query: 151 RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210
+ + + +LIYG Q + A ++T M + G+ P TYT L+ G K +
Sbjct: 485 EHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF 544
Query: 211 DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKL 270
D+ ++ + Q+ L Q N+L AE + + + G+ + TYT L
Sbjct: 545 DN-AFRLFEMMEQNGLTP--DEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSL 601
Query: 271 MCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALA----VSGHGEYIDE--VSAI 321
+ G++K G+ D L+ + + D Y ++ AL ++ +D+ VS +
Sbjct: 602 VDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGV 661
Query: 322 VCFVNICFHWL-------EGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
C NI + + EG M +G +PSA TYT + Y K G ++
Sbjct: 662 KC--NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEA 719
Query: 366 RRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINK 424
L+ + V D + + GH YID S ++ V S + Y L+ K
Sbjct: 720 EHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLK 778
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 126/297 (42%), Gaps = 33/297 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLES----QGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
YN LR L F T+++ KL S +G+ P+ VTY + +I YC+ G++
Sbjct: 147 YNLALRSLL----RFDMTEYMGKLYSHLVQEGLLPDTVTY------NTMIMAYCKKGSLA 196
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + +R+ + NAL+ G+ + +D+ A +L MM G + +YT L+
Sbjct: 197 IAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILI 256
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G + + + + ++ L + + A G+L M G+
Sbjct: 257 QGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVV 316
Query: 262 PSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
PS TY ++ GY K G M ++ L+ Q+G + + Y +I+ L G +DE
Sbjct: 317 PSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC----GGKLDEA 372
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
+ L G + G P+ T+T L+ GY K +D R+ + SS
Sbjct: 373 EEL----------LNGAI--ARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISS 417
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 125/347 (36%), Gaps = 83/347 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +L+ + ++ + K++ GI P +TY LI C+ + A +
Sbjct: 496 YGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQ------CKKHEFDNAFR 549
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M E +N L ++ AE + + + G+ + TYT L+ G++
Sbjct: 550 LFEMMEQNGLTPDEQAYNVLTDALCKS---GRAEEAYSFLVRKGVVLTKVTYTSLVDGFS 606
Query: 206 KHGDMDSIKTKIPSL---KPQSELF--------LCFSFQLTNLL---------------- 238
K G+ D I + +++L+ LC +L L
Sbjct: 607 KAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIV 666
Query: 239 --ILVSSDMAS------AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
++ S+M A+ + M +G +PSA TYT + Y K G ++ L+ +
Sbjct: 667 AYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEM 726
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV-------CFVNIC--------------- 328
V D + + GH YID + + C N
Sbjct: 727 ERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLI 786
Query: 329 ----------FHWLEGPM-------MSQAGLEPSAQTYTKLMCGYAK 358
++W+E M M + GL P+ TY+ ++ G+ K
Sbjct: 787 NAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCK 833
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 122/308 (39%), Gaps = 64/308 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+++ Y + FL K+ S G+EP+ VTY + L+ C++G A K
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY------NSLMDYLCKNGRCTEARK 325
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + + L+ G++ + G+L +M + G+ P+ ++ L+C YA
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G +D + L FS M Q GL P
Sbjct: 386 KQGKVD-------------QAMLVFS----------------------KMRQQGLNPDTV 410
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQS-GSSLVNGD--YLDIIHALAVSGHGEYIDE----- 317
TY ++ K G ++ R Q L G+ Y +IH+L + + E
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 318 VSAIVCFVNICF------HWLEG---------PMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ +C I F H EG +M + G++P+ TY+ L+ GY G M
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKM 530
Query: 363 DSIRRLLA 370
D +LLA
Sbjct: 531 DEATKLLA 538
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 134/339 (39%), Gaps = 69/339 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQG--IEPNRVTYQQLISNSKLISKYCQDGN 139
++ YN LL+ D + + L + G P+ V+Y + +I+ + ++G+
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSY------TTVINGFFKEGD 214
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
++ A M D+ + +N++I +A M A +LT M + G+ P+ +TY
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
++ GY G +P+ A G L M G
Sbjct: 275 IVHGYCSSG------------QPK-----------------------EAIGFLKKMHSDG 299
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
+EP TY LM K+G R++ + + G Y ++ A G +
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA---LV 356
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
E+ ++ +M + G+ P+ ++ L+C YAK G +D + ++
Sbjct: 357 EMHGLL------------DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 377 VNGD---YLDIIHALAVSGHGE----YIDEII-SKIQPG 407
+N D Y +I L SG E Y +++I ++ PG
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 106/256 (41%), Gaps = 16/256 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y ++ + + + ++ + + P + Y LI + + K+ +
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW------D 461
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +++ M D+ + FN++I H + + +E + +M + G++P+ TY+ L+
Sbjct: 462 KAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLI 521
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMASAEGILTMMSQAGL 260
GY G MD + S+ C ++ L N +S M A + M +G+
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR-MEDALVLFREMESSGV 580
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
P TY ++ G + + + L + +SG+ L Y I+H L DE
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC---KNNLTDE 637
Query: 318 VSAIVCFVNICFHWLE 333
A+ F N+C L+
Sbjct: 638 --ALRMFQNLCLTDLQ 651
>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g38730-like [Brachypodium distachyon]
Length = 599
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 155/374 (41%), Gaps = 31/374 (8%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
G V ++ YNA+L V L + ++++ G+ +R ++ + +I+ Y
Sbjct: 173 GRAGVAMNTHVYNAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSF------NTVIALY 226
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G A + E M+D+ +N +I+G + M A + T M A +EP
Sbjct: 227 VRKGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDT 286
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TYT L+ GY + GD+ ++ + ++ + M G+L+
Sbjct: 287 VTYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSE 346
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
M ++ T L+ YAK GDM S V++ + +SG L Y +IH
Sbjct: 347 MDGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFC---K 403
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL--- 368
+ +DE + F MM + G P+ ++ L+ G+ K + D++ +
Sbjct: 404 AKELDEAKEAL------FE-----MMGR-GFSPNYSVFSWLVDGFCKKNNTDAVLLIPDE 451
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADA---ANHIYHLINKG 425
L + G Y +I L G + +++ ++Q G G D A Y + G
Sbjct: 452 LIKRGLPPDKSVYRSLIRRLCKKGLVDLAQKVLHQMQ-GKGLEVDCLVYATLAYAHLTAG 510
Query: 426 QIDAAYRIVNTLAR 439
++ AA I+N +AR
Sbjct: 511 KVAAASDILNEMAR 524
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+L +G+ P++ Y+ LI + C+ G ++ A K+L M+ K + V+ L Y
Sbjct: 451 ELIKRGLPPDKSVYRSLIR------RLCKKGLVDLAQKVLHQMQGKGLEVDCLVYATLAY 504
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
H A +A+A IL M++ + + Q Y L Y
Sbjct: 505 AHLTAGKVAAASDILNEMARKQMSVTPQIYNCLCTSY 541
Score = 46.2 bits (108), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 42/227 (18%), Positives = 88/227 (38%), Gaps = 41/227 (18%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
++ YNA++R ++ L++++ + ++ + VT LI++ Y + G++
Sbjct: 321 VATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQADHVTCNTLINS------YAKRGDMTS 374
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASA-EGILTMMSQA------------- 188
A K+ + M + + + + ALI+G +A ++ A E + MM +
Sbjct: 375 ACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALFEMMGRGFSPNYSVFSWLVD 434
Query: 189 ---------------------GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
GL P Y L+ K G +D + + ++ +
Sbjct: 435 GFCKKNNTDAVLLIPDELIKRGLPPDKSVYRSLIRRLCKKGLVDLAQKVLHQMQGKGLEV 494
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
C + L + +A+A IL M++ + + Q Y L Y
Sbjct: 495 DCLVYATLAYAHLTAGKVAAASDILNEMARKQMSVTPQIYNCLCTSY 541
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 95/249 (38%), Gaps = 27/249 (10%)
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
L HS + A + M GL P A T L+ A+ M + K+
Sbjct: 117 LALSHSHSARPHDAARVFDQMRARGLAPDAHACTALLTALAR-ARMTATAHKV--FNEMG 173
Query: 225 ELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG--- 278
+ + + N ++ L + D AEG++T M AG+ ++ ++ Y + G
Sbjct: 174 RAGVAMNTHVYNAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVRKGMQY 233
Query: 279 DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
+ VR + G + +IH L G + ++ M
Sbjct: 234 EAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTD---------------MI 278
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ-NGSSLVNG--DYLDIIHALAVSGHGE 395
A +EP TYT L+ GY + GD+ +L + +V G Y II L G +
Sbjct: 279 AAAVEPDTVTYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMK 338
Query: 396 YIDEIISKI 404
++ ++S++
Sbjct: 339 EVNGLLSEM 347
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 133/323 (41%), Gaps = 39/323 (12%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V ++ YN L+R + ++E G PN VTY + LI YC+ G
Sbjct: 6 VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTY------NTLIDAYCKMG 59
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
I+ A +L+ M K + +N +I G + M A IL M G P TY
Sbjct: 60 RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFL-CFSFQLTNLLILVSS-----DMASAEGIL 252
L+ GY K G+ +L +E+ S + L++S ++ A
Sbjct: 120 TLLNGYCKEGNFHQ------ALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 173
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVS 309
M GL P+ +TYT L+ G+++ G ++ R+L +SG S Y IH V
Sbjct: 174 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 233
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIR 366
E ++E +V M + GL P +Y+ ++ G+ + G++D ++
Sbjct: 234 ---ERMEEALGVV------------QEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMK 278
Query: 367 RLLAQNGSSLVNGDYLDIIHALA 389
+ + + G S Y +I L
Sbjct: 279 QEMVEKGVSPDAVTYSSLIQGLC 301
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 131/320 (40%), Gaps = 59/320 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+ Y L + S+G++PN LIS + +I+ C++G+++
Sbjct: 44 NVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPN------LISYNVIINGLCREGSMK 97
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +ILE M K F E +N L+ G+ + + A I M + G+ PS TYT L+
Sbjct: 98 EAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALI 157
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELF--LCFSFQLTNLL-----IL--------- 240
K +++ + +I L+P + L F LL IL
Sbjct: 158 NSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 217
Query: 241 --------------VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SV 283
V M A G++ M + GL P +Y+ ++ G+ + G++D +
Sbjct: 218 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQM 277
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
++ + + G S Y +I L E+ + ++ L+ GL
Sbjct: 278 KQEMVEKGVSPDAVTYSSLIQGLC---------EMRRLTEACDLSQEMLD------MGLP 322
Query: 344 PSAQTYTKLMCGYAKHGDMD 363
P TYT L+ Y GD++
Sbjct: 323 PDEFTYTTLINAYCVEGDLN 342
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 16/206 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y AL+ + +F ++ +G+ PN TY + LI + + G + A +
Sbjct: 153 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY------TTLIDGFSRQGLLNEAYR 206
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
IL M + F S +NA I+GH M A G++ M + GL P +Y+ ++ G+
Sbjct: 207 ILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFC 266
Query: 206 KHGDMD---SIKTKI--PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ G++D +K ++ + P + + L + L + S E M GL
Sbjct: 267 RKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQE-----MLDMGL 321
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRL 286
P TYT L+ Y GD++ L
Sbjct: 322 PPDEFTYTTLINAYCVEGDLNKALHL 347
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 58/146 (39%), Gaps = 12/146 (8%)
Query: 72 VHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK-- 129
+H G L D Y+ L+ T L KL + P+ VTY LI N
Sbjct: 352 IHKGFLP---DAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNI 408
Query: 130 -------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGIL 182
LI +C G + A ++ E M ++ E V+N +I+GH + ++ A +
Sbjct: 409 EFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLY 468
Query: 183 TMMSQAGLEPSAQTYTKLMCGYAKHG 208
M +G P T L+ K G
Sbjct: 469 KEMIHSGFVPHTVTVITLIKALFKEG 494
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 93/255 (36%), Gaps = 24/255 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ ++ + ++ +G+ P+ VTY S LI C+ +
Sbjct: 254 DVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY------SSLIQGLCEMRRLT 307
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M D P E + LI + D+ A + M G P A TY+ L+
Sbjct: 308 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 367
Query: 202 CGYAKHGDMDSIKT---------KIPSLKPQSELFL-CFSFQLTNLLILVSSD-----MA 246
G K K +PS L C + + +++ L+ M
Sbjct: 368 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMH 427
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDII 303
A+ + M + +P Y ++ G+ + G++ L + SG + +I
Sbjct: 428 EADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLI 487
Query: 304 HALAVSGHGEYIDEV 318
AL G E + EV
Sbjct: 488 KALFKEGMNEEMSEV 502
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 33/291 (11%)
Query: 83 ISHYNALLRVYLDNE---HTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
++ YN+L+ Y + + L ++ GI P VT+ LI+ YC++ N
Sbjct: 226 VATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING------YCKNSN 279
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
A ++ E M+ + S +N+LI G + ++ M GL P+ T+
Sbjct: 280 TAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGC 339
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MS 256
++ G+ K G M I + +E + + N+LI V + E + + M+
Sbjct: 340 VLKGFCKKGMMADANDWIDGM---TERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMA 396
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE 313
+ G+ P+ TY L+ G+++ GD S LL + + D Y +I AL G
Sbjct: 397 KKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG--- 453
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
EV V ++ MS+ GLEP+ TY ++ G+ G++ S
Sbjct: 454 ---EVRKAVKLLD---------EMSEVGLEPNHLTYNTIIQGFCDKGNIKS 492
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 28/220 (12%)
Query: 76 ELDVPLDISHYNALLRVYL---DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
E +V D+ YN L+ VY E + + +AK +GI PN TY LI+
Sbjct: 362 ERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAK---KGISPNVTTYNCLITG----- 413
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ + G+ A+ +L+ M++K +N LI ++ A +L MS+ GLEP
Sbjct: 414 -FSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472
Query: 193 SAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQS-----ELFLCFSFQLTNLLILVSSD 244
+ TY ++ G+ G++ S I+T++ + ++ +F+ + Q+
Sbjct: 473 NHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQI--------GK 524
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
M A +L M L P+ TY + G + G +R
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIR 564
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 122/304 (40%), Gaps = 33/304 (10%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
FN +I G + + A + + GL PS TY L+ GY K G ++ LK
Sbjct: 194 FNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLK 253
Query: 222 PQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
E + + +LI +S+ A+A + M Q G+ S TY L+ G G
Sbjct: 254 EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313
Query: 279 DMDSVRRLLAQ------SGSSLVNGDYLD-IIHALAVSGHGEYID-------EVSAIVCF 324
++ +L+ + S + + G L ++ ++ID E ++
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYN 373
Query: 325 VNICFHWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
+ I + G M M++ G+ P+ TY L+ G+++ GD S LL +
Sbjct: 374 ILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433
Query: 376 LVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDA 429
+ D Y +I AL G +++ ++ VG + + I +KG I +
Sbjct: 434 GIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE-VGLEPNHLTYNTIIQGFCDKGNIKS 492
Query: 430 AYRI 433
AY I
Sbjct: 493 AYEI 496
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 16/213 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ ++ G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTF------TTLIDGHCKNGRLD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A I M ++ F +N LIYG + D+ A +L MS+ GL+P TYT L+
Sbjct: 259 LAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS---IKTKI--PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
G K GD+++ ++ ++ S++ ++ F L AE +L M
Sbjct: 319 DGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQ-----EGRAVDAEKMLREML 373
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ GL+P +TYT +M + K GD+ LL +
Sbjct: 374 RVGLKPDDETYTMIMNEFCKKGDVKKASELLRE 406
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 134/306 (43%), Gaps = 41/306 (13%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + +M A+ + +++ GL PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A G+ M GL P+ T+T L+
Sbjct: 192 RLKNAMRASGVQPDVYT-YSVLINGL--CKESRMDEANGLFGEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGD----MDSVRRLLAQSGSSLVNGDYLDIIHALAVSG---HGEY-IDEVSAIVC 323
G+ K+G MD R++L Q S V Y +I+ L G Y +DE
Sbjct: 249 DGHCKNGRLDLAMDIYRQMLNQGFSPDVV-TYNTLIYGLCKKGDLKQARYLLDE------ 301
Query: 324 FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGD 380
MS+ GL+P TYT L+ G K GD+++ +R + + L +
Sbjct: 302 -------------MSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVV 348
Query: 381 YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
Y +I L G ++++ ++ VG D + + KG + A ++ +
Sbjct: 349 YTALIFGLCQEGRAVDAEKMLREMLR-VGLKPDDETYTMIMNEFCKKGDVKKASELLREM 407
Query: 438 ARSANI 443
R+ +
Sbjct: 408 QRNGRV 413
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 128/305 (41%), Gaps = 36/305 (11%)
Query: 76 ELDVPLDISHYNALL-RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
E P + +N L+ R + E + + F A + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDA-ITKWGLRPSVVSFNTLMNG------Y 181
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G+++ ++ MR ++ LI G + + M A G+ M GL P+
Sbjct: 182 IKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNG 241
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV-----SSDMASAE 249
T+T L+ G+ K+G +D + Q FS + L+ D+ A
Sbjct: 242 VTFTTLIDGHCKNGRLDLAMDIYRQMLNQG-----FSPDVVTYNTLIYGLCKKGDLKQAR 296
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+L MS+ GL+P TYT L+ G K GD+++ L + + D D+++ +
Sbjct: 297 YLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLD--DVVYTALIF 354
Query: 310 G---HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G G +D + M + GL+P +TYT +M + K GD+
Sbjct: 355 GLCQEGRAVDAEKML-------------REMLRVGLKPDDETYTMIMNEFCKKGDVKKAS 401
Query: 367 RLLAQ 371
LL +
Sbjct: 402 ELLRE 406
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 41/309 (13%)
Query: 152 DKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 211
D +P S FN L++ + D+ A+ + +++ GL PS ++ LM GY + GD+D
Sbjct: 129 DCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLD 188
Query: 212 S---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYT 268
+K+ + + Q +++ +S + L S M A G+ M GL P+ T+T
Sbjct: 189 EGFRLKSAMHASGVQPDVYT-YSVLINGL--CKESKMDDANGLFDEMLDKGLVPNGVTFT 245
Query: 269 KLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAI 321
L+ G+ K+ +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 246 TLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDE---- 301
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVN 378
MS GL+P TYT L+ G K GD+++ R+ + Q L +
Sbjct: 302 ---------------MSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDD 346
Query: 379 GDYLDIIHALAVSGHGEYID-EIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIV 434
Y +I L G Y+D E + + VG D + I KG + +++
Sbjct: 347 VAYTALISGLC--QEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLL 404
Query: 435 NTLARSANI 443
+ R ++
Sbjct: 405 KEMQRDGHV 413
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ ++ +G+ PN VT+ + LI+ +C++ ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTF------TTLIAGHCKNRRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+++ + ++ ++ + AE +L M GL+
Sbjct: 319 DGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLK 378
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ + K GD+ + +LL +
Sbjct: 379 PDTGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 141/367 (38%), Gaps = 53/367 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ L+R + + L ++ G EP+ + L+ C++G+++ A+K
Sbjct: 173 FVVLIRRFASANMVKKAVEVLDEMPKYGFEPDEYVF------GCLLDALCKNGSVKDASK 226
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E MR+K P + F +L+YG + + A+ +L M +AGLEP +T L+ GYA
Sbjct: 227 VFEDMREK-IPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYA 285
Query: 206 KHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
G M + ++ P + C++ L L M A + M + G
Sbjct: 286 HAGKMADAYDLLNDMRKRGYEPNAN---CYTV-LIQALCRTEKRMDEAMRVFVEMERYGC 341
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
E TYT L+ G+ K G +D +L V + + L E +E
Sbjct: 342 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEE--- 398
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYT---KLMCGYAKHGDMDSIRRLLAQNGSSLV 377
C +E M Q G P Y +L C + + + + + NG S
Sbjct: 399 -------CLELIEK--MKQIGCHPDLLIYNVVIRLACNFREVKEAVRLWNEMEANGLSPG 449
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG-----QIDAAYR 432
++ +I+ GY +A +H ++++G Q
Sbjct: 450 ADMFVIMINGFTSQ-----------------GYLIEACSHFKEMVSRGIFSAPQYGTLKS 492
Query: 433 IVNTLAR 439
++NTL R
Sbjct: 493 LLNTLLR 499
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 166/402 (41%), Gaps = 59/402 (14%)
Query: 120 TYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISE-GVFNALIYGHSQANDMASA 178
+Y+ S K++SK Q G + G ++E MR + + E +F LI + AN + A
Sbjct: 133 SYEVCKSMVKILSKMRQFGAVWG---LIEEMRKENPELIEPELFVVLIRRFASANMVKKA 189
Query: 179 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-------DSIKTKIPSLKPQSELFLCFS 231
+L M + G EP + L+ K+G + + ++ KIP P F
Sbjct: 190 VEVLDEMPKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMREKIP---PNLRYFTSLL 246
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---A 288
+ + A+ +L M +AGLEP +T L+ GYA G M LL
Sbjct: 247 YGWCR-----EGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMR 301
Query: 289 QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
+ G Y +I AL + + +DE A+ FV M + G E T
Sbjct: 302 KRGYEPNANCYTVLIQALCRT--EKRMDE--AMRVFVE----------MERYGCEADIVT 347
Query: 349 YTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
YT L+ G+ K G +D S+ + + G Y+ I+ A E E+I K++
Sbjct: 348 YTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMK 407
Query: 406 PGVGYSADAANHIYHLI-----NKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVK 460
+G D IY+++ N ++ A R+ N + NG F++
Sbjct: 408 Q-IGCHPDLL--IYNVVIRLACNFREVKEAVRLWNEM----EANGLSPGADMFVIMINGF 460
Query: 461 TNQPGVGYSADAANHIYHLINKG-----QIDAAYRIVNTLAR 497
T+Q GY +A +H ++++G Q ++NTL R
Sbjct: 461 TSQ---GYLIEACSHFKEMVSRGIFSAPQYGTLKSLLNTLLR 499
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 121/357 (33%), Gaps = 71/357 (19%)
Query: 46 FVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDF 105
F L WC E G L V E + DI + LL Y D
Sbjct: 242 FTSLLYGWCRE-----GKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL 296
Query: 106 LAKLESQGIEPNRVTYQQLI------------------------------SNSKLISKYC 135
L + +G EPN Y LI + + LIS +C
Sbjct: 297 LNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC 356
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G I+ +L+ MR K S+ + ++ H + ++ M Q G P
Sbjct: 357 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDLL 416
Query: 196 TYT---KLMCGYAKHGDMDSIKTKIPS--LKPQSELFLCF--SFQLTNLLILVSSDMAS- 247
Y +L C + + + + ++ + L P +++F+ F LI S
Sbjct: 417 IYNVVIRLACNFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEACSHFKEM 476
Query: 248 -AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA----QSGSSLVNGDYLDI 302
+ GI + P T L+ + ++ + + + ++ S +N I
Sbjct: 477 VSRGIFSA-------PQYGTLKSLLNTLLRDDKLEMAKDVWSCISNKTSSCELNVSAWTI 529
Query: 303 -IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
IHAL GH + E + C +E +M P TY KLM G K
Sbjct: 530 WIHALFAKGH---VKEACSY------CLDMMEMDLM------PQPNTYVKLMKGLNK 571
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 33/291 (11%)
Query: 83 ISHYNALLRVYLDNE---HTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
++ YN+L+ Y + + L ++ GI P VT+ LI+ YC++ N
Sbjct: 226 VATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING------YCKNSN 279
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
A ++ E M+ + S +N+LI G + ++ M GL P+ T+
Sbjct: 280 TAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGC 339
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MS 256
++ G+ K G M I + +E + + N+LI V + E + + M+
Sbjct: 340 VLKGFCKKGMMADANDWIDGM---TERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMA 396
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE 313
+ G+ P+ TY L+ G+++ GD S LL + + D Y +I AL G
Sbjct: 397 KKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG--- 453
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
EV V ++ MS+ GLEP+ TY ++ G+ G++ S
Sbjct: 454 ---EVRKAVKLLD---------EMSEVGLEPNHLTYNTIIQGFCDKGNIKS 492
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 28/220 (12%)
Query: 76 ELDVPLDISHYNALLRVYL---DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
E +V D+ YN L+ VY E + + +AK +GI PN TY LI+
Sbjct: 362 ERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAK---KGISPNVTTYNCLITG----- 413
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ + G+ A+ +L+ M++K +N LI ++ A +L MS+ GLEP
Sbjct: 414 -FSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472
Query: 193 SAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQS-----ELFLCFSFQLTNLLILVSSD 244
+ TY ++ G+ G++ S I+T++ + ++ +F+ + Q+
Sbjct: 473 NHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQI--------GK 524
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
M A +L M L P+ TY + G + G +R
Sbjct: 525 MDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIR 564
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 122/304 (40%), Gaps = 33/304 (10%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
FN +I G + + A + + GL PS TY L+ GY K G ++ LK
Sbjct: 194 FNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLK 253
Query: 222 PQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
E + + +LI +S+ A+A + M Q G+ S TY L+ G G
Sbjct: 254 EMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEG 313
Query: 279 DMDSVRRLLAQ------SGSSLVNGDYLD-IIHALAVSGHGEYID-------EVSAIVCF 324
++ +L+ + S + + G L ++ ++ID E ++
Sbjct: 314 KVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYN 373
Query: 325 VNICFHWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
+ I + G M M++ G+ P+ TY L+ G+++ GD S LL +
Sbjct: 374 ILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEK 433
Query: 376 LVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDA 429
+ D Y +I AL G +++ ++ VG + + I +KG I +
Sbjct: 434 GIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSE-VGLEPNHLTYNTIIQGFCDKGNIKS 492
Query: 430 AYRI 433
AY I
Sbjct: 493 AYEI 496
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 133/329 (40%), Gaps = 38/329 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YNAL+ ++ F + ++ +GI P+ +TY S +I +C+ ++
Sbjct: 290 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITY------SSMIDGFCKQNRLD 343
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M K FN LI G+ +A + +L M++AGL + TYT L+
Sbjct: 344 AAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLI 403
Query: 202 CGYAKHGDMDSIKTKI---------PSLKPQSELF--LCFSFQLTNLLILVSSDMASAEG 250
G+ + GD+++ + + P++ + L LC + +L + L + + S
Sbjct: 404 HGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 463
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALA 307
I G+EP QTY L+ G G L + + D Y +IH L
Sbjct: 464 IDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLC 523
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
+DE + + M P+ T+T L+ GY K G +D
Sbjct: 524 KQSR---LDEATQMF------------DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 568
Query: 368 LLAQNGSSLVNGD---YLDIIHALAVSGH 393
L + G + + Y+ +IH G+
Sbjct: 569 LFCEMGRRGIVANAITYITLIHGFRKVGN 597
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 28/276 (10%)
Query: 99 TFSPTDFLAKLESQG-IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPI 157
T S + L K+E I+PN V + L + +I+ +C G A ++L+ M ++ I
Sbjct: 230 TVSALNLLRKMEEVSHIKPNVVIWP-LERRTCMINGFCSSGRWSEAQQLLQEMLERK-KI 287
Query: 158 SEGV--FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT 215
S V +NALI + AE + M G+ PS TY+ ++ G+ K +D+ +
Sbjct: 288 SPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEH 347
Query: 216 K--IPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI--LTMMSQAGLEPSAQTYTKLM 271
+ + K S + F+ + D +GI L M++AGL + TYT L+
Sbjct: 348 MFYLMATKGCSPDIITFNTLIAGYCRAKRVD----DGIKLLHEMTEAGLVANTITYTTLI 403
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVSAIVCFVNICFH 330
G+ + GD+++ + LL + SS V + + L + +G+ D + F
Sbjct: 404 HGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEM--------FK 455
Query: 331 WLEGPMMSQ------AGLEPSAQTYTKLMCGYAKHG 360
++ M G+EP QTY L+ G G
Sbjct: 456 AMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEG 491
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ ++ + ++ +GI P+ +TY +I C+ ++
Sbjct: 476 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHG------LCKQSRLD 529
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
AT++ + M K+F + F LI G+ +A + + M + G+ +A TY L+
Sbjct: 530 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 589
Query: 202 CGYAKHGDMD 211
G+ K G+++
Sbjct: 590 HGFRKVGNIN 599
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 125/269 (46%), Gaps = 24/269 (8%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ ++ + +PN TY + LI C+D N + A KIL M +K S +N
Sbjct: 330 NMFKEMTEKHCQPNVHTY------TVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYN 383
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
ALI G+ + ASA IL++M P+A+TY +L+ G+ + + I + L
Sbjct: 384 ALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKN---IHKAMSLLHKM 440
Query: 224 SELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
E L + N+LI D+ SA +L++M+++GL P TY+ + K G +
Sbjct: 441 LERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLV 500
Query: 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
+ R L + + ++I++ + G+ + + +VS +L M+S A
Sbjct: 501 EEARSLFESLKEKGIKAN--EVIYSTLIDGYCK-VGKVSD--------GRFLLDKMLS-A 548
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G P++ TY L+ GY K + R L+
Sbjct: 549 GCVPNSITYNSLIDGYCKEKNFKEARLLV 577
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/322 (20%), Positives = 130/322 (40%), Gaps = 34/322 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ LD Y +L+ Y N++ + + ++G N V+Y + LI +C+
Sbjct: 235 LSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSY------TNLIHGFCEAR 288
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A K+ M + + + +I+ Q A + M++ +P+ TYT
Sbjct: 289 RVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYT 348
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMM 255
L+C + + D K + + + L S N LI ASA IL++M
Sbjct: 349 VLICSLCEDSNFDDAKKILNGMLEKG---LIPSVVTYNALIDGYCKKGLSASALEILSLM 405
Query: 256 SQAGLEPSAQTYTKLMCGYAK----HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
P+A+TY +L+ G+ + H M + ++L + V + + + + G
Sbjct: 406 ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNV------VTYNILIHGQ 459
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ D SA +M+++GL P TY+ + K G ++ R L
Sbjct: 460 CKEGDLGSAYKLL----------SLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFES 509
Query: 372 NGSSLVNGDYLDIIHALAVSGH 393
+ + ++I++ + G+
Sbjct: 510 LKEKGIKAN--EVIYSTLIDGY 529
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 115/282 (40%), Gaps = 31/282 (10%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
L+ +GI+ N V Y S LI YC+ G + +L+ M + +N+LI G
Sbjct: 510 LKEKGIKANEVIY------STLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDG 563
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSE 225
+ + + A ++ +M + +EP+A TYT L+ K + D + ++ S +
Sbjct: 564 YCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPD 623
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---S 282
+F+ +F + AE ++ M+ G+ P YT + Y + G +D
Sbjct: 624 VFIYTAFIHA---YCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFG 680
Query: 283 VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV------------CFVNICFH 330
+ + + + G Y +I L+ + E C+ + +
Sbjct: 681 ILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYE 740
Query: 331 W---LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ L G M++ G P+A TY K + G K G ++ RL
Sbjct: 741 FTLDLFGK-MAEHGCAPNANTYGKFITGLCKVGCLEVAHRLF 781
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 111/281 (39%), Gaps = 34/281 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+++ YC+ GN+ A + + + + +LI G+ + ++ +A I M G
Sbjct: 210 MVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG 269
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLLILVSSD 244
+ +YT L+ G+ + +D + P + F L L
Sbjct: 270 CLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQL-----GR 324
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL-----------AQSGSS 293
A + M++ +P+ TYT L+C + + D +++L + ++
Sbjct: 325 KTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNA 384
Query: 294 LVNG-----------DYLDIIHALAVSGHGEYIDEVSAIVCF-VNICFHWLEGPMMSQAG 341
L++G + L ++ + S + +E+ C NI M +
Sbjct: 385 LIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERK 444
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLA-QNGSSLVNGDY 381
L+P+ TY L+ G K GD+ S +LL+ N S LV ++
Sbjct: 445 LQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEW 485
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 10/173 (5%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D K+ G PN TY K I+ C+ G +E A ++ + M++K +E ++N
Sbjct: 744 DLFGKMAEHGCAPNANTY------GKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYN 797
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
+L+ Q A L +M + P + L+CG G+ + K S
Sbjct: 798 SLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQC 857
Query: 224 SELF--LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+ + + + LL SD S + +M G + +TY+ L+ G+
Sbjct: 858 EYNYDEMVWKVLIDGLLKKGLSDKCS--DLFGIMETQGCQIHPKTYSMLIEGF 908
>gi|115463017|ref|NP_001055108.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|113578659|dbj|BAF17022.1| Os05g0294600 [Oryza sativa Japonica Group]
gi|125551683|gb|EAY97392.1| hypothetical protein OsI_19323 [Oryza sativa Indica Group]
gi|215697097|dbj|BAG91091.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630985|gb|EEE63117.1| hypothetical protein OsJ_17925 [Oryza sativa Japonica Group]
Length = 757
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 139/312 (44%), Gaps = 34/312 (10%)
Query: 88 ALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL 147
+L++++ DN + +E +GI N Y + LI+ YC+ IE A +
Sbjct: 379 SLIKIFCDNGLKTEALIIQSAMEKKGIASNTSMY------NTLINAYCKANQIEEAEGVF 432
Query: 148 EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 207
M++K + +N L+ + + E +L M GL P+A++Y L+ Y +
Sbjct: 433 VEMKEKGLSATAMTYNILMGAYCRRLQPEVVESLLLEMQDLGLRPNARSYNFLIRVYGQQ 492
Query: 208 GDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM--MSQAGLEPSAQ 265
M S K + L+ +++ + S T+LL + + + LT M + GL+PS +
Sbjct: 493 KKM-SEKAEDAFLRMKTDGIMPTSSTYTSLLCAYAVNGLHEKAYLTYVDMKREGLKPSLE 551
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDY--LDIIHALAVSG---HGEYIDEVSA 320
TYT L+ + + GD + L ++ S++N +I + + G HG Y+
Sbjct: 552 TYTALIDMFRRAGDTEK----LMETWRSMINEKVPGTRVIFHMVLDGLAKHGLYVQATDV 607
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD 380
I F +AGL+P+ TY LM +A+ G + +LL + + + D
Sbjct: 608 IYEF-------------RRAGLQPTVMTYNILMNAFARGGQHYKLPQLLKEMAAMELKPD 654
Query: 381 ---YLDIIHALA 389
Y +I+A A
Sbjct: 655 SVTYSTMIYAYA 666
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 136/326 (41%), Gaps = 74/326 (22%)
Query: 85 HYNALLRVYLDNEHTFSPTD---FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
H +L+ + + N+ S D F ++E +G+ + + IS LI +C +G
Sbjct: 338 HMTSLIMLDVMNKSKTSAKDAWEFFQRMERKGV---KWSLDICIS---LIKIFCDNGLKT 391
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A I M K + ++N LI + +AN + AEG+ M + GL +A TY LM
Sbjct: 392 EALIIQSAMEKKGIASNTSMYNTLINAYCKANQIEEAEGVFVEMKEKGLSATAMTYNILM 451
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS----AEGILTMMSQ 257
Y + + +++ + ++ +L L + + N LI V AE M
Sbjct: 452 GAYCRRLQPEVVESLLLEMQ---DLGLRPNARSYNFLIRVYGQQKKMSEKAEDAFLRMKT 508
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
G+ P++ TYT L+C YA VNG +H A + Y+D
Sbjct: 509 DGIMPTSSTYTSLLCAYA-------------------VNG-----LHEKA---YLTYVD- 540
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD----MDSIRRLLAQN- 372
M + GL+PS +TYT L+ + + GD M++ R ++ +
Sbjct: 541 -------------------MKREGLKPSLETYTALIDMFRRAGDTEKLMETWRSMINEKV 581
Query: 373 -GSSLVNGDYLDIIHALAVSGHGEYI 397
G+ ++ LD ++ HG Y+
Sbjct: 582 PGTRVIFHMVLD-----GLAKHGLYV 602
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 104/270 (38%), Gaps = 68/270 (25%)
Query: 86 YNALLRVY-LDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI------------------- 125
YN L+RVY + + D ++++ GI P TY L+
Sbjct: 482 YNFLIRVYGQQKKMSEKAEDAFLRMKTDGIMPTSSTYTSLLCAYAVNGLHEKAYLTYVDM 541
Query: 126 ----------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
+ + LI + + G+ E + M ++ P + +F+ ++ G ++
Sbjct: 542 KREGLKPSLETYTALIDMFRRAGDTEKLMETWRSMINEKVPGTRVIFHMVLDGLAKHGLY 601
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT 235
A ++ +AGL+P+ TY LM +A+ G ++L
Sbjct: 602 VQATDVIYEFRRAGLQPTVMTYNILMNAFARGGQ---------------------HYKLP 640
Query: 236 NLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGS 292
LL +MA+ E L+P + TY+ ++ YA+ D +L+ +SG
Sbjct: 641 QLL----KEMAAME----------LKPDSVTYSTMIYAYARVRDFSRAFYYHKLMVRSGQ 686
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
Y +++ L V + I + +AIV
Sbjct: 687 LPDVSSYKKLLNTLDVKAARKNIKDKNAIV 716
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 149/326 (45%), Gaps = 39/326 (11%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S LI + ++G+I+ +I + M PI+ +N LI+G + M A IL M
Sbjct: 49 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT 108
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
G +P+++T+ L+ GY + +M + ++ ++ + S+ + D++
Sbjct: 109 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 168
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIH 304
A +L M+ +GL+P+ Y+ L+ GYA G ++ RRLL S V D Y II
Sbjct: 169 ANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 228
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
L+ +G ++E S + LE + GL+P A T+ + GY+K G M
Sbjct: 229 CLSKAGK---MEEAST---------YLLE---IQGRGLKPDAVTFGAFILGYSKTGKMTE 273
Query: 365 IRR---------LLAQNG--SSLVNGDYL--DIIHALAVSGHGEYIDEIISKIQPGVGYS 411
+ L+ N + L+NG + +++ AL++ H + ++ +Q +
Sbjct: 274 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG-VLPDVQTCSAF- 331
Query: 412 ADAANHIYHLINKGQIDAAYRIVNTL 437
I+ L+ G++ A ++ + L
Sbjct: 332 ------IHGLLKNGRVQEALKVFSEL 351
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 131/313 (41%), Gaps = 37/313 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P+++ YN L+ + L + + G +PN T+ LI YC++
Sbjct: 76 IPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG------YCREH 129
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A ++L+ M + S + A+I G D++ A +L M+ +GL+P+ Y+
Sbjct: 130 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 189
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ GYA G ++ + + + F + + + M A L +
Sbjct: 190 TLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 249
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS-----------GSSLVNGDYL--DIIHA 305
GL+P A T+ + GY+K G M + + + L+NG + +++ A
Sbjct: 250 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA 309
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPM--------------MSQAGLEPSAQTYTK 351
L++ H + ++ V C ++ G + + + GL P TY+
Sbjct: 310 LSIFRHLHAL----GVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSS 365
Query: 352 LMCGYAKHGDMDS 364
L+ G+ K G+++
Sbjct: 366 LISGFCKQGEVEK 378
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 41/217 (18%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H L V D+ +A + L N ++L+ +G+ P+ TY S LIS
Sbjct: 315 HLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY------SSLIS 368
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C+ G +E A ++ + M K + ++NAL+ G ++ D+ A + M + GLEP
Sbjct: 369 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEP 428
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ TY+ ++ GY K S ++A A +
Sbjct: 429 DSVTYSTMIDGYCK-----------------------------------SENVAEAFSLF 453
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
M G++P + Y L+ G K GDM+ L +
Sbjct: 454 HEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE 490
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 117/292 (40%), Gaps = 22/292 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YNA++ + +L +++ +G++P+ VT+ I Y + G +
Sbjct: 219 DIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG------YSKTGKMT 272
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K + M D + ++ LI GH +A ++ A I + G+ P QT + +
Sbjct: 273 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 332
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K+G + LK + + F++ ++ A + M G+
Sbjct: 333 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA 392
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH--GEYIDEVS 319
P+ Y L+ G K GD+ R+L + D + ++ + G+ E + E
Sbjct: 393 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD--SVTYSTMIDGYCKSENVAEAF 450
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
++ FH M G++P + Y L+ G K GDM+ L +
Sbjct: 451 SL-------FHE-----MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFRE 490
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 50/273 (18%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+ + G +A M A+ M + GL+P + L+ G+ + GD+D + L+
Sbjct: 13 YTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV------LR 66
Query: 222 PQSELFLC-FSFQLTNLLILVS-----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
+ + C L +L+ M A IL M G +P+++T+ L+ GY
Sbjct: 67 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYC 126
Query: 276 KHGDMDSVRRLL-----------AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF 324
+ +M LL A S +++NG + H +S + +++
Sbjct: 127 REHNMGRALELLDEMEKRNLVPSAVSYGAMING----LCHCKDLSLANKLLEK------- 175
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---Y 381
M+ +GL+P+ Y+ L+ GYA G ++ RRLL S V D Y
Sbjct: 176 ------------MTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCY 223
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADA 414
II L+ +G E + +IQ G G DA
Sbjct: 224 NAIISCLSKAGKMEEASTYLLEIQ-GRGLKPDA 255
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 113/292 (38%), Gaps = 45/292 (15%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y+ ++ Y +E+ ++ S+G++P+ Y L+ C++G++E
Sbjct: 429 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC------CKEGDME 482
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M K F + FN LI G+ ++ + A + M + P TYT ++
Sbjct: 483 KAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 541
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+ K G M+ L Q NL++ D A + M G++
Sbjct: 542 DWHCKAGKMEEAN------------LLFKEMQERNLIV----DTVFA--LFEKMVAKGVK 583
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ--SGSSLVNGDYLDIIHALAVSG--HGEYIDE 317
P TY ++ + K ++ +L + L G IH L ++ E + E
Sbjct: 584 PDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG----TIHDLLITALCKREDLTE 639
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
S ++ M + GL+PS + L+ + + G MD R+
Sbjct: 640 ASKLL------------DEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVF 679
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 121/308 (39%), Gaps = 64/308 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+++ Y + FL K+ S G+EP+ VTY + L+ C++G A K
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY------NSLMDYLCKNGRCTEARK 325
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + + L+ G++ + G+L +M + G+ P+ ++ L+C YA
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G +D + L FS M Q GL P
Sbjct: 386 KQGKVD-------------QAMLVFS----------------------KMRQQGLNPDTV 410
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQS-GSSLVNGD--YLDIIHALAVSGHGEYIDE----- 317
TY ++ K G ++ R Q L G+ Y +IH+L + + E
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 318 VSAIVCFVNICF------HWLEG---------PMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ +C I F H EG +M + G++P TY+ L+ GY G M
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530
Query: 363 DSIRRLLA 370
D +LLA
Sbjct: 531 DEATKLLA 538
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 134/339 (39%), Gaps = 69/339 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQG--IEPNRVTYQQLISNSKLISKYCQDGN 139
++ YN LL+ D + + L + G P+ V+Y + +I+ + ++G+
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSY------TTVINGFFKEGD 214
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
++ A M D+ + ++++I +A M A +LT M + G+ P+ +TY
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
++ GY G +P+ A G L M G
Sbjct: 275 IVHGYCSSG------------QPK-----------------------EAIGFLKKMHSDG 299
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
+EP TY LM K+G R++ + + G Y ++ A G +
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA---LV 356
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
E+ ++ +M + G+ P+ ++ L+C YAK G +D + ++
Sbjct: 357 EMHGLL------------DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 377 VNGD---YLDIIHALAVSGHGE----YIDEII-SKIQPG 407
+N D Y +I L SG E Y +++I ++ PG
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 105/256 (41%), Gaps = 16/256 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y ++ + + + ++ + + P + Y LI + + K+ +
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW------D 461
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +++ M D+ + FN++I H + + +E + +M + G++P TY+ L+
Sbjct: 462 KAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 521
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMASAEGILTMMSQAGL 260
GY G MD + S+ C ++ L N +S M A + M +G+
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR-MEDALVLFREMESSGV 580
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
P TY ++ G + + + L + +SG+ L Y I+H L DE
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC---KNNLTDE 637
Query: 318 VSAIVCFVNICFHWLE 333
A+ F N+C L+
Sbjct: 638 --ALRMFQNLCLTDLQ 651
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 124/296 (41%), Gaps = 30/296 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN ++ + F +++ QGI PN VTY S ++ +C G +
Sbjct: 210 DVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTY------SSILHGFCNLGQLN 263
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
AT + + M + + F L+ G + + A + MM++ G+EP A TY+ LM
Sbjct: 264 EATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALM 323
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQA 258
GY MD + + + S ++ N+LI S + A+ +L+ M
Sbjct: 324 DGYCLQSQMDEAQKLFDIMVGKG---FAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDR 380
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
L P TY+ LM G+ + G ++L + S + D Y ++ L GH +
Sbjct: 381 DLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGH---L 437
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
DE F L+ M ++ +EP Y L+ G G +++ R L +
Sbjct: 438 DEA----------FRLLKA--MQESKIEPHICIYNILIQGMCNFGKLEAARELFSN 481
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 142/378 (37%), Gaps = 68/378 (17%)
Query: 95 DNEHTFSPTDFLAKLESQGIEPNRVTY-----------------------------QQLI 125
+ +H L K+ G++P VT+ LI
Sbjct: 118 NRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLI 177
Query: 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM 185
+ + +I C+ G+ A ++L+ M +K +N +I + A + M
Sbjct: 178 TYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEM 237
Query: 186 SQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM 245
G+ P+ TY+ ++ G+ G ++ + + ++ + +F + + +
Sbjct: 238 VDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMI 297
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI--I 303
A + MM++ G+EP A TY+ LM GY MD ++L +V + +
Sbjct: 298 LEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLF----DIMVGKGFAPSVRV 353
Query: 304 HALAVSGH--GEYIDEVSAI-------------VCFVNICFHWLEG--PMMSQA------ 340
+ + ++GH ++E + V + + + + P ++Q
Sbjct: 354 YNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMC 413
Query: 341 --GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGE 395
GL P + TY+ L+ G KHG +D RLL S + Y +I + G E
Sbjct: 414 SYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLE 473
Query: 396 YIDEIISK-----IQPGV 408
E+ S IQP V
Sbjct: 474 AARELFSNLFVKGIQPSV 491
>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
Length = 683
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 121/312 (38%), Gaps = 64/312 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN+++ + + FL K+ S G+EP+ VTY + L+ C++G
Sbjct: 157 DCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTY------NSLMDYLCKNGRCT 210
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A KI + M + + L+ G++ + G+L +M + G+ P+ ++ L+
Sbjct: 211 EARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILV 270
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
C YAK ++ E L FS M Q GL
Sbjct: 271 CAYAKQEKVE-------------EAMLVFS----------------------KMRQQGLN 295
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDE- 317
P+A TY ++ K G ++ Q G S N Y +IH L E +E
Sbjct: 296 PNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEEL 355
Query: 318 ----VSAIVCFVNICF------HWLEG---------PMMSQAGLEPSAQTYTKLMCGYAK 358
+ +C I F H EG +M + G++P TY+ L+ GY
Sbjct: 356 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 415
Query: 359 HGDMDSIRRLLA 370
G MD +LLA
Sbjct: 416 AGKMDEATKLLA 427
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 130/325 (40%), Gaps = 23/325 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIE--PNRVTYQQLISNSKLISKYCQDGN 139
D+ YN LL D + + L + G + P+ V+Y S +I+ + ++G+
Sbjct: 50 DVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSY------STVINGFFKEGD 103
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
++ M D+ + +N++I +A + A +LT M ++G+ P TY
Sbjct: 104 LDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNS 163
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
++ G+ G + ++ ++ + + A I M++ G
Sbjct: 164 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 223
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
L+P TY L+ GYA G + + LL + ++ ++ + ++ V + +
Sbjct: 224 LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY--VFSILVCAYAKQEKVEE 281
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGSSL 376
A++ F M Q GL P+A TY ++ K G ++ Q G S
Sbjct: 282 AMLVF----------SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 331
Query: 377 VNGDYLDIIHALAVSGHGEYIDEII 401
N Y +IH L E +E+I
Sbjct: 332 GNIVYNSLIHGLCTCNKWERAEELI 356
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 152/383 (39%), Gaps = 54/383 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY--------------------QQLI 125
++ L+ Y E +K+ QG+ PN VTY +Q+I
Sbjct: 266 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 325
Query: 126 SN---------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
+ LI C E A +++ M D+ ++ FN++I H + +
Sbjct: 326 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVI 385
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ-LT 235
+E + +M + G++P TY+ L+ GY G MD + S+ C ++ L
Sbjct: 386 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLI 445
Query: 236 NLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGS 292
N +S M A + M +G+ P TY ++ G + + + L + +SG
Sbjct: 446 NGYCKISR-MKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGR 504
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
L Y I+H L + D+ A+ F N+C L+ A+T+ +
Sbjct: 505 QLELSTYNIILHGLC---KNKLTDD--ALRMFQNLCL----------MDLKLEARTFNIM 549
Query: 353 MCGYAKHGDMDSIRRL-LAQNGSSLVNGDYLDIIHALAVSGHG--EYIDEIISKIQP-GV 408
+ K G D + L +A + + LV + + A + G G E +D++ ++ G
Sbjct: 550 IDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 609
Query: 409 GYSADAANHIYH-LINKGQIDAA 430
+ N I L+ +G+I A
Sbjct: 610 TVDSGMLNFIVRELLQRGEITRA 632
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 17/235 (7%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D+ ++ Y ++ Y + +L +Q +E N V Y + LI YC++
Sbjct: 591 DLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVY------NTLIRAYCRN 644
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
GN A K+ + MR K P + +++LI+G M A+ ++ M + GL P+ Y
Sbjct: 645 GNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 704
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL----VSSDMASAEGILT 253
T L+ GY K G MD K+ ++ + + ++T +++ S DM +A +L
Sbjct: 705 TALIGGYCKLGQMD----KVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLH 760
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHA 305
M G+ P TY L G+ K G ++ ++ ++Q G L Y ++H
Sbjct: 761 EMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 23/272 (8%)
Query: 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGIL 182
L++ + LI C+ GN++ A ++L+ M ++ F + + +N LI G + + +
Sbjct: 490 NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLR 549
Query: 183 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
M + G+EP TY L+ G + G +D K + + +++ + +
Sbjct: 550 GEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKA 609
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDY 299
+ E + T + LE ++ Y L+ Y ++G+ +L + G Y
Sbjct: 610 DKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATY 669
Query: 300 LDIIHALAVSGHGE----YIDEVSA------IVCFVNICFHWLE-GPM---------MSQ 339
+IH + G E IDE+ +VC+ + + + G M MS
Sbjct: 670 SSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSS 729
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ P+ TYT ++ GY+K GDM + +LL +
Sbjct: 730 YDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 761
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 129/317 (40%), Gaps = 35/317 (11%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD YN L+ ++ QGIEP+ TY LI C+ G +
Sbjct: 524 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHG------MCRIGKL 577
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A + + + + + +I G+ +A+ + E + T + LE ++ Y L
Sbjct: 578 DEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTL 637
Query: 201 MCGYAKHGDM-------DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
+ Y ++G+ D +++K + P + + + N+ M A+ ++
Sbjct: 638 IRAYCRNGNTVEAFKLHDDMRSK--GIPPTTATYSSLIHGMCNI-----GRMEDAKCLID 690
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
M + GL P+ YT L+ GY K G MD V +L + S ++ + I + + + G+ +
Sbjct: 691 EMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPN--KITYTVMIDGYSK 748
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLA 370
D +A H + G G+ P TY L G+ K G ++ I ++
Sbjct: 749 SGDMKTAAKLL-----HEMVG-----KGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMS 798
Query: 371 QNGSSLVNGDYLDIIHA 387
Q G L Y ++H
Sbjct: 799 QEGLPLDEITYTTLVHG 815
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 6/191 (3%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+R Y N +T + S+GI P TY S LI C G +E A
Sbjct: 634 YNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATY------SSLIHGMCNIGRMEDAKC 687
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+++ MR + + + ALI G+ + M +L MS + P+ TYT ++ GY+
Sbjct: 688 LIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYS 747
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K GDM + + + + + ++ + + I MSQ GL
Sbjct: 748 KSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEI 807
Query: 266 TYTKLMCGYAK 276
TYT L+ G+ +
Sbjct: 808 TYTTLVHGWQQ 818
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 112/519 (21%), Positives = 212/519 (40%), Gaps = 66/519 (12%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+L V ++ YN L+ + + F K+ G+ +TY LI+ + K+
Sbjct: 274 KLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFN 333
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ A +L+ +K F +E V+N LI G+ + ++ A I M G+ P++
Sbjct: 334 E------ANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSV 387
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T ++ G+ K G M+ + + + + +F + ++S SA L M
Sbjct: 388 TLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREM 447
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGD-MDSVR---RLLAQS-GSSLVNGDYLDIIHALAVSG 310
+ P+ T L+ G K G D+V RLL + G++LV + L IH L +G
Sbjct: 448 LLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNAL--IHGLCKTG 505
Query: 311 H--------------GEYIDEVSAIVCFVNICFHW-------LEGPMMSQAGLEPSAQTY 349
+ G +D+++ C L G M+ Q G+EP TY
Sbjct: 506 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ-GIEPDTFTY 564
Query: 350 TKLMCGYAKHGDMDSIRRLLAQNGS-SLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGV 408
L+ G + G +D L + S LV Y + + + G+ + KI+ G
Sbjct: 565 NLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY---TYGVMIDGYCK-----ADKIEEG- 615
Query: 409 GYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGV-G 467
++ + ++ + NTL R+ NG V F + +++ G+
Sbjct: 616 -------EKLFTELLTQNLELNSVVYNTLIRAYCRNGNT--VEAFKLHDDMRSK--GIPP 664
Query: 468 YSADAANHIYHLINKGQIDAAYRIVNTLARSA---NINGEQLPVGGFLVRHMVKTNQPID 524
+A ++ I+ + N G+++ A +++ + + N+ +GG+ K Q +D
Sbjct: 665 TTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGY-----CKLGQ-MD 718
Query: 525 KVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVE 563
KV+ V ++ ++HP V+I + D A +
Sbjct: 719 KVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAK 757
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 109/285 (38%), Gaps = 57/285 (20%)
Query: 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
N+ + + + + L+S + +E + + E MR P +F+ I + +
Sbjct: 205 NKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSP-DVYLFSTAINAFCKGGKVE 263
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQ 233
A + M + G+ P+ TY L+ G KHG++D K K+ + L + +S
Sbjct: 264 DAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATL-ITYSVL 322
Query: 234 LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293
+ L+ L A +L + G P+ Y L+ GY K G++
Sbjct: 323 INGLMKL--EKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL------------- 367
Query: 294 LVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
GD L I G M+S+ G+ P++ T ++
Sbjct: 368 ---GDALRI------------------------------RGDMVSK-GINPNSVTLNSII 393
Query: 354 CGYAKHGDMDSIRRLLAQ---NGSSLVNGDYLDIIHALAVSGHGE 395
G+ K G M+ +L + G S+ G + IIH L ++ E
Sbjct: 394 QGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 438
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y ++ Y + + L ++ +GI P+ VTY L + +C++G IE K
Sbjct: 739 YTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNG------FCKEGKIEEGFK 792
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAE 179
I ++M + P+ E + L++G Q + + + E
Sbjct: 793 ICDYMSQEGLPLDEITYTTLVHGWQQPSALTNQE 826
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 121/308 (39%), Gaps = 64/308 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+++ Y + FL K+ S G+EP+ VTY + L+ C++G A K
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY------NSLMDYLCKNGRCTEARK 325
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + + L+ G++ + G+L +M + G+ P+ ++ L+C YA
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G +D + L FS M Q GL P
Sbjct: 386 KQGKVD-------------QAMLVFS----------------------KMRQQGLNPDTV 410
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQS-GSSLVNGD--YLDIIHALAVSGHGEYIDE----- 317
TY ++ K G ++ R Q L G+ Y +IH+L + + E
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEM 470
Query: 318 VSAIVCFVNICF------HWLEG---------PMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ +C I F H EG +M + G++P TY+ L+ GY G M
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530
Query: 363 DSIRRLLA 370
D +LLA
Sbjct: 531 DEATKLLA 538
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 136/339 (40%), Gaps = 69/339 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIE--PNRVTYQQLISNSKLISKYCQDGN 139
++ YN LL+ D+ + + L + G + P+ V+Y + +I+ + ++G+
Sbjct: 161 NVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSY------TTVINGFFKEGD 214
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
++ A M D+ + ++++I +A M A +LT M + G+ P+ +TY
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
++ GY G +P+ A G L M G
Sbjct: 275 IVHGYCSSG------------QPK-----------------------EAIGFLKKMHSDG 299
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
+EP TY LM K+G R++ + + G Y ++ A G +
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA---LV 356
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
E+ ++ +M + G+ P+ ++ L+C YAK G +D + ++
Sbjct: 357 EMHGLL------------DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 377 VNGD---YLDIIHALAVSGHGE----YIDEII-SKIQPG 407
+N D Y +I L SG E Y +++I ++ PG
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 105/256 (41%), Gaps = 16/256 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y ++ + + + ++ + + P + Y LI + + K+ +
Sbjct: 408 DTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW------D 461
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +++ M D+ + FN++I H + + +E + +M + G++P TY+ L+
Sbjct: 462 KAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 521
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMASAEGILTMMSQAGL 260
GY G MD + S+ C ++ L N +S M A + M +G+
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR-MEDALVLFREMESSGV 580
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
P TY ++ G + + + L + +SG+ L Y I+H L DE
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLC---KNNLTDE 637
Query: 318 VSAIVCFVNICFHWLE 333
A+ F N+C L+
Sbjct: 638 --ALRMFQNLCLTDLQ 651
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 15/218 (6%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D+ ++ Y ++ Y + +L +Q +E N V Y + LI YC++
Sbjct: 658 DLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVY------NTLIRAYCRN 711
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
GN A K+ + MR K P + +++LI+G M A+ ++ M + GL P+ Y
Sbjct: 712 GNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCY 771
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL----VSSDMASAEGILT 253
T L+ GY K G MD K+ ++ + + ++T +++ S DM +A +L
Sbjct: 772 TALIGGYCKLGQMD----KVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLH 827
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
M G+ P TY L G+ K G ++ +LLA+ G
Sbjct: 828 EMVGKGIVPDTVTYNVLTNGFCKEGKIEE-GKLLAEDG 864
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 23/272 (8%)
Query: 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGIL 182
L++ + LI C+ GN++ A ++L+ M ++ F + + +N LI G + + +
Sbjct: 557 NLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLR 616
Query: 183 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
M + G+EP TY L+ G + G +D K + + +++ + +
Sbjct: 617 GEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKA 676
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDY 299
+ E + T + LE ++ Y L+ Y ++G+ +L + G Y
Sbjct: 677 DKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATY 736
Query: 300 LDIIHALAVSGHGE----YIDEVSA------IVCFVNICFHWLE-GPM---------MSQ 339
+IH + G E IDE+ +VC+ + + + G M MS
Sbjct: 737 SSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSS 796
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ P+ TYT ++ GY+K GDM + +LL +
Sbjct: 797 YDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 828
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 126/300 (42%), Gaps = 33/300 (11%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD YN L+ ++ QGIEP+ TY LI C+ G +
Sbjct: 591 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHG------MCRIGKL 644
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A + + + + + +I G+ +A+ + E + T + LE ++ Y L
Sbjct: 645 DEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTL 704
Query: 201 MCGYAKHGDM-------DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
+ Y ++G+ D +++K + P + + + N+ M A+ ++
Sbjct: 705 IRAYCRNGNTVEAFKLHDDMRSK--GIPPTTATYSSLIHGMCNI-----GRMEDAKCLID 757
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
M + GL P+ YT L+ GY K G MD V +L + S ++ + I + + + G+ +
Sbjct: 758 EMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPN--KITYTVMIDGYSK 815
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
D +A H + G G+ P TY L G+ K G ++ +LLA++G
Sbjct: 816 SGDMKTAAKLL-----HEMVG-----KGIVPDTVTYNVLTNGFCKEGKIEE-GKLLAEDG 864
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 112/519 (21%), Positives = 212/519 (40%), Gaps = 66/519 (12%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+L V ++ YN L+ + + F K+ G+ +TY LI+ + K+
Sbjct: 341 KLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFN 400
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ A +L+ +K F +E V+N LI G+ + ++ A I M G+ P++
Sbjct: 401 E------ANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSV 454
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T ++ G+ K G M+ + + + + +F + ++S SA L M
Sbjct: 455 TLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREM 514
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGD-MDSVR---RLLAQS-GSSLVNGDYLDIIHALAVSG 310
+ P+ T L+ G K G D+V RLL + G++LV + L IH L +G
Sbjct: 515 LLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNAL--IHGLCKTG 572
Query: 311 H--------------GEYIDEVSAIVCFVNICFHW-------LEGPMMSQAGLEPSAQTY 349
+ G +D+++ C L G M+ Q G+EP TY
Sbjct: 573 NMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQ-GIEPDTFTY 631
Query: 350 TKLMCGYAKHGDMDSIRRLLAQNGS-SLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGV 408
L+ G + G +D L + S LV Y + + + G+ + KI+ G
Sbjct: 632 NLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVY---TYGVMIDGYCK-----ADKIEEG- 682
Query: 409 GYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGV-G 467
++ + ++ + NTL R+ NG V F + +++ G+
Sbjct: 683 -------EKLFTELLTQNLELNSVVYNTLIRAYCRNGNT--VEAFKLHDDMRSK--GIPP 731
Query: 468 YSADAANHIYHLINKGQIDAAYRIVNTLARSA---NINGEQLPVGGFLVRHMVKTNQPID 524
+A ++ I+ + N G+++ A +++ + + N+ +GG+ K Q +D
Sbjct: 732 TTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGY-----CKLGQ-MD 785
Query: 525 KVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVE 563
KV+ V ++ ++HP V+I + D A +
Sbjct: 786 KVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAK 824
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 109/285 (38%), Gaps = 57/285 (20%)
Query: 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
N+ + + + + L+S + +E + + E MR P +F+ I + +
Sbjct: 272 NKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQGVSP-DVYLFSTAINAFCKGGKVE 330
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQ 233
A + M + G+ P+ TY L+ G KHG++D K K+ + L + +S
Sbjct: 331 DAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATL-ITYSVL 389
Query: 234 LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293
+ L+ L A +L + G P+ Y L+ GY K G++
Sbjct: 390 INGLMKL--EKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL------------- 434
Query: 294 LVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
GD L I G M+S+ G+ P++ T ++
Sbjct: 435 ---GDALRI------------------------------RGDMVSK-GINPNSVTLNSII 460
Query: 354 CGYAKHGDMDSIRRLLAQ---NGSSLVNGDYLDIIHALAVSGHGE 395
G+ K G M+ +L + G S+ G + IIH L ++ E
Sbjct: 461 QGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 505
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 137/329 (41%), Gaps = 27/329 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN ++ + + L+++E+ GI PN TY S +I CQ G E
Sbjct: 396 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTY------SIMIHGLCQSGEPE 449
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A+ +LE M K + V+ LI G+ + +++ A I M++ + P Y L+
Sbjct: 450 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 509
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G +K G ++ ++ + L F++ L + D+ SAE ++ M GL+
Sbjct: 510 FGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLK 569
Query: 262 PSAQTYTKLMCGYAKHGDMDSVR---RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P+ Y L+ Y K D++ V + + G L N Y +IH L+ SG+ E
Sbjct: 570 PNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME----- 624
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
F L G + + G P Y+ L+ G K D + +L + V+
Sbjct: 625 --------AAFRVLSG--IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVD 674
Query: 379 GD---YLDIIHALAVSGHGEYIDEIISKI 404
+ Y +I L SG Y + + I
Sbjct: 675 PNIVCYNALIDGLCKSGDISYARNVFNSI 703
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 63/302 (20%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI---------------------- 140
+D L ++ ++G++PN Y + LIS YC++GN+
Sbjct: 452 SDLLEEMTTKGLKPNAFVY------APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCY 505
Query: 141 -------------EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
E +TK M+++ +E ++ LI+G+ + D+ SAE ++ M
Sbjct: 506 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 565
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF--LCFSFQLTNLLILVSSDM 245
GL+P+ Y L+ Y K D++ + + S+ Q + + + NL S +M
Sbjct: 566 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL--SSSGNM 623
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDI 302
+A +L+ + + G P Y+ L+ G K D + +L + V+ + Y +
Sbjct: 624 EAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 683
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
I L SG Y V F +I GL P+ TYT L+ G K GD+
Sbjct: 684 IDGLCKSGDISYARNV-----FNSIL----------AKGLVPNCVTYTSLIDGSCKVGDI 728
Query: 363 DS 364
+
Sbjct: 729 SN 730
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 142/328 (43%), Gaps = 25/328 (7%)
Query: 46 FVY--LNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPT 103
FVY L S +C E G +L CE F T +++V D+ YN+L+ T
Sbjct: 468 FVYAPLISGYCRE---GNVSLACE-IFDKMT-KVNVLPDLYCYNSLIFGLSKVGRVEEST 522
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ A+++ +G+ PN TY S LI Y ++G++E A ++++ M D ++ ++
Sbjct: 523 KYFAQMQERGLLPNEFTY------SGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 576
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
L+ + +++D+ M G+ + Y L+ + G+M++ + ++
Sbjct: 577 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKN 636
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ + + ++D A GIL MS+ G++P+ Y L+ G K GD+
Sbjct: 637 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 696
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
R + S L G + + + ID + N + + E M G+
Sbjct: 697 RNVF---NSILAKGLVPNCVT------YTSLIDGSCKVGDISNAFYLYNE---MLATGIT 744
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
P A Y+ L G + GD++ L+ +
Sbjct: 745 PDAFVYSVLTTGCSSAGDLEQAMFLIEE 772
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 145/342 (42%), Gaps = 46/342 (13%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFM-RDKTFPISEGVFN 163
+ ++ + G++PN++TY L+ C+ G ++ A+ +L+ M RD P + +N
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRG------LCKMGQMDRASLLLKQMVRDSHRPDTI-TYN 401
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD-------MDSIKTK 216
+I GH + + A +L+ M AG+ P+ TY+ ++ G + G+ ++ + TK
Sbjct: 402 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 461
Query: 217 IPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
LKP + F + +++ A I M++ + P Y L+ G +K
Sbjct: 462 --GLKPNA-----FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSK 514
Query: 277 HGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
G ++ + AQ G Y +IH +G E +++
Sbjct: 515 VGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ------------- 561
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR---RLLAQNGSSLVNGDYLDIIHALAV 390
M GL+P+ Y L+ Y K D++ + + + G L N Y +IH L+
Sbjct: 562 --RMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSS 619
Query: 391 SGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYR 432
SG+ E ++S I+ G D H+Y + G A R
Sbjct: 620 SGNMEAAFRVLSGIEKN-GSVPDV--HVYSSLISGLCKTADR 658
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 179/427 (41%), Gaps = 79/427 (18%)
Query: 85 HYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
+ + L Y + L ++ +G N VTY LI+ C+ G +E A
Sbjct: 224 RHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAG------LCRSGAVEEAF 277
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
+ M D + ALI G ++ A+ +L MS A L+P+ Y L+ G+
Sbjct: 278 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 337
Query: 205 AKHGDMDS----IKTKIPS-LKPQSELF------LCFSFQLTNLLILVSSDMASA----- 248
+ G+ D IK + + ++P + LC Q+ +L+ + +
Sbjct: 338 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 397
Query: 249 -------EG------------ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
EG +L+ M AG+ P+ TY+ ++ G + G+ + LL +
Sbjct: 398 ITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 457
Query: 290 SGSSLVNGDYLDIIHALAVSGH---------GEYIDEVSAI------VCFVNICFHWLE- 333
+ + + ++A +SG+ E D+++ + C+ ++ F +
Sbjct: 458 MTTKGLKPNAF--VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKV 515
Query: 334 ---------GPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLVNGD--Y 381
M + GL P+ TY+ L+ GY K+GD++S +L+ + + L D Y
Sbjct: 516 GRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIY 575
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIY-----HLINKGQIDAAYRIVNT 436
+D++ + S + I+++ S + + N IY +L + G ++AA+R+++
Sbjct: 576 IDLLESYFKS---DDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 632
Query: 437 LARSANI 443
+ ++ ++
Sbjct: 633 IEKNGSV 639
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 20/200 (10%)
Query: 95 DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT 154
D E F D ++K +G++PN V Y LI C+ G+I A + + K
Sbjct: 657 DREKAFGILDEMSK---KGVDPNIVCYNALIDG------LCKSGDISYARNVFNSILAKG 707
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
+ + +LI G + D+++A + M G+ P A Y+ L G + GD++
Sbjct: 708 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 767
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVS-----SDMASAEGILTMMSQAGLEPSAQTYTK 269
I E+FL +++ LV M +L ++ GL P+A T
Sbjct: 768 FLI------EEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 821
Query: 270 LMCGYAKHGDMDSVRRLLAQ 289
++ G ++ G + V + +
Sbjct: 822 IISGLSEAGKLSEVHTIFVE 841
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 80.1 bits (196), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 6/206 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L R Y + T + + ++ + PN T ++ YC+ GN+
Sbjct: 232 DVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTC------GIIVGGYCEQGNLA 285
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +++ MRD + +FN+LI G D + LTMM ++G++P T++ +M
Sbjct: 286 EALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIM 345
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G++ G MD + + F + + + + AE +L MS+ G+
Sbjct: 346 NGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVR 405
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL 287
P+ +T ++ G+ G M+ ++
Sbjct: 406 PNVVIFTTIISGWCTAGKMEKAWKVF 431
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 131/319 (41%), Gaps = 54/319 (16%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
NA++ + ++ + + K+E G +P T+ LI +I K E + K+
Sbjct: 131 NAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKP------EESMKL 184
Query: 147 LEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
LE M R + +N L+ + + A ++ M +G++P TY L YA
Sbjct: 185 LELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYA 244
Query: 206 KHGDMDSIKTKI-----PSLKPQSELF----------------LCFSFQLTNL-----LI 239
+ G+ + ++ I + P L +++ +L L+
Sbjct: 245 QDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLV 304
Query: 240 LVSS------DMASAEGI---LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
+ +S D+ ++G+ LTMM ++G++P T++ +M G++ G MD + +
Sbjct: 305 IFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDM 364
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYT 350
S + D IH ++ G ++ + + F MS+ G+ P+ +T
Sbjct: 365 LKSGIEPD----IHVFSILAKG-FVRAGEPVKAESLLNF-------MSKYGVRPNVVIFT 412
Query: 351 KLMCGYAKHGDMDSIRRLL 369
++ G+ G M+ ++
Sbjct: 413 TIISGWCTAGKMEKAWKVF 431
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/321 (18%), Positives = 129/321 (40%), Gaps = 45/321 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y AL+ + + + L+++E GI+P+ + + +I+ + + GN++ A +
Sbjct: 95 YTALVAALTRQKRFKAISGLLSEMEETGIKPDSILL------NAIINAFSESGNVKEAME 148
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ-AGLEPSAQTYTKLMCGY 204
I + M + + FN LI G+ + +L +M++ L+P+ +TY L+
Sbjct: 149 IFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGAL 208
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
K + + + ++ + AE I+ M + P+
Sbjct: 209 CKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNE 268
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSG-----------SSLVNGDYLDIIHALAVSGHGE 313
+T ++ GY + G++ R++ + +SL+ G +LDI G +
Sbjct: 269 RTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKG-FLDI-------GDSD 320
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
+D+ MM ++G++P T++ +M G++ G MD + +
Sbjct: 321 GVDKALT---------------MMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDML 365
Query: 374 SSLVNGDYLDIIHALAVSGHG 394
S + D IH ++ G
Sbjct: 366 KSGIEPD----IHVFSILAKG 382
>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Brachypodium distachyon]
Length = 410
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 120/286 (41%), Gaps = 40/286 (13%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ AL+ Y + K+ GIEPN TY + L+ ++C+ G E A
Sbjct: 76 FTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTY------NILVGEWCRTGEFERARL 129
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M K + +N LI G + M A +L +M + G+ PS T+ L+ GY
Sbjct: 130 LFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYG 189
Query: 206 KHGDMD-----SIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQ 257
K G M S + ++ +P + + N LI + DM A + M +
Sbjct: 190 KAGKMSNALHFSNQMRMAGYQPSAVTY--------NALIAGFCRARDMIRANRAFSDMKE 241
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEY 314
GL P+ TYT L+ +A+ DMD + A ++G + Y ++HAL + G+ +
Sbjct: 242 RGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMK- 300
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
A F +I + GL+ Y L+ GY + G
Sbjct: 301 ----DARKLFQSI----------GEKGLQVGNVIYDMLIYGYGREG 332
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 114/261 (43%), Gaps = 21/261 (8%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++ ++GI N V+Y LI+ C+ ++ AT++LE MR + S FN L+
Sbjct: 133 EMPAKGITRNVVSYNTLIAG------LCRYRKMKDATQLLELMRREGIRPSVVTFNLLVD 186
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G+ +A M++A M AG +PSA TY L+ G+ + DM +K +
Sbjct: 187 GYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAP 246
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
++ + +DM A + M +AGLE +TY L+ G+M R+L
Sbjct: 247 TKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLF 306
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
G + ++I+ + + G+G A+ + M + G P++
Sbjct: 307 QSIGEKGLQVG--NVIYDMLIYGYGREGSSYKAMKLIME----------MRKKGFVPNSA 354
Query: 348 TY---TKLMCGYAKHGDMDSI 365
+Y +++C K + +++
Sbjct: 355 SYGLTIRILCNDGKCSEAEAL 375
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 109/269 (40%), Gaps = 15/269 (5%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+ L+ YC+ G++ A ++ + M +E F ALI+G+ + M
Sbjct: 42 TALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRI 101
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
G+EP+ TY L+ + + G+ + + + + S+ + M
Sbjct: 102 GGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKD 161
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
A +L +M + G+ PS T+ L+ GY K G M + Q + + +
Sbjct: 162 ATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQ--MRMAGYQPSAVTYNAL 219
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
++G D + A F + M + GL P+ TYT L+ +A+ DMD
Sbjct: 220 IAGFCRARDMIRANRAFSD----------MKERGLAPTKVTYTILIDAFARENDMDKAFE 269
Query: 368 LLAQNGSSLVNGD---YLDIIHALAVSGH 393
+ A + + D Y ++HAL + G+
Sbjct: 270 MFAGMEKAGLEVDVRTYGVLVHALCMEGN 298
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/193 (18%), Positives = 79/193 (40%), Gaps = 6/193 (3%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNAL+ + + ++ +G+ P +VTY + LI + ++ +++ A +
Sbjct: 216 YNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTY------TILIDAFARENDMDKAFE 269
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M + + L++ +M A + + + GL+ Y L+ GY
Sbjct: 270 MFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYG 329
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G I ++ + + S+ LT ++ + AE ++ M +AG++ S
Sbjct: 330 REGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSES 389
Query: 266 TYTKLMCGYAKHG 278
L+ A+ G
Sbjct: 390 VRQVLLNAKARQG 402
>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 913
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 120/284 (42%), Gaps = 32/284 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D + YN L+ + + L K++ + ++P+ ++ +I + G+++
Sbjct: 521 DRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEG------FAVAGDMK 574
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A IL+ MR + +NALI+G + N + A +L MS AG+ P+ TYT +M
Sbjct: 575 RALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIM 634
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYA GD+ +K + ++ S M SA + MS +
Sbjct: 635 RGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIA 694
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY---- 314
+ Y L+ G+A+ GD+ L+ Q V + Y I+A +G +
Sbjct: 695 RNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTV 754
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
IDE MS GL+P+ +TYT L+ G+A+
Sbjct: 755 IDE-------------------MSDVGLKPNLKTYTTLIKGWAR 779
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 107/273 (39%), Gaps = 64/273 (23%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G++P+R Y + LI +C+ GN++ A +ILE M+ + S F +I G + A
Sbjct: 517 GLQPDRAIY------NLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVA 570
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
DM A IL +M ++G P+ TY L+ HG
Sbjct: 571 GDMKRALDILDLMRRSGCAPTVMTYNALI-----HG------------------------ 601
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
++ + + A +L MS AG+ P+ TYT +M GYA GD+ +
Sbjct: 602 ------LIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKE 655
Query: 293 SLVNGD---YLDIIHALAVSGH--------GEYIDEVSAIVCFV-NICFH--------WL 332
+ D Y ++ A SG E + A FV NI W
Sbjct: 656 GGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWE 715
Query: 333 EGPMMSQA---GLEPSAQTYTKLMCGYAKHGDM 362
+M Q G+ P+ TYT + K GDM
Sbjct: 716 AADLMKQMKEDGVPPNIHTYTSYINACCKAGDM 748
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 96/242 (39%), Gaps = 53/242 (21%)
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
+IS LI+ Y + G + A I + M + ++ LI G +D +A I
Sbjct: 452 IISYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFE 511
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
M ++GL+P Y L+ + K G+MD
Sbjct: 512 EMLKSGLQPDRAIYNLLIEAFCKMGNMD-------------------------------- 539
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYL 300
A IL M + ++PS + + ++ G+A GDM + L+ +SG + Y
Sbjct: 540 ---RAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYN 596
Query: 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+IH L ++V V +N MS AG+ P+ TYT +M GYA G
Sbjct: 597 ALIHGLIRK------NQVERAVSVLN---------KMSIAGITPNEHTYTIIMRGYAATG 641
Query: 361 DM 362
D+
Sbjct: 642 DI 643
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/342 (20%), Positives = 136/342 (39%), Gaps = 70/342 (20%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+++++GIE VTY S LIS + + + + A + + + ++ +++ +I+
Sbjct: 337 EMKAEGIELTIVTY------SILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIH 390
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
H Q+ +M AE ++ M + G++ Y +M GY D LK
Sbjct: 391 AHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKE----- 445
Query: 228 LCFSFQ------LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
CF+ L NL + + +A A I M +G++ + +TY+ L+ G+ D
Sbjct: 446 CCFTPSIISYGCLINLYVKIGK-VAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFT 504
Query: 282 SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
+ R+ + M ++G
Sbjct: 505 NAFRIFEE-----------------------------------------------MLKSG 517
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV---NGDYLDIIHALAVSGHGEYID 398
L+P Y L+ + K G+MD R+L + + N + II AV+G +
Sbjct: 518 LQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRAL 577
Query: 399 EIISKI-QPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLA 438
+I+ + + G + N + H LI K Q++ A ++N ++
Sbjct: 578 DILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMS 619
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ LD+ Y LLR + S ++ SQ I N Y LI + + G
Sbjct: 658 LKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDG------WARRG 711
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A +++ M++ P + + + I +A DM A+ ++ MS GL+P+ +TYT
Sbjct: 712 DVWEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYT 771
Query: 199 KLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL 238
L+ G+A+ D + K+ LKP + C +T+LL
Sbjct: 772 TLIKGWARASLPDRALKCFEEMKLAGLKPDEAAYHCL---VTSLL 813
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 18/169 (10%)
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
+PS + + ++ YAK GD + +++ + F F V+ DM A
Sbjct: 274 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 333
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSL--VNG-DYLDIIHALA 307
M G+E + TY+ L+ G+ K D S L ++ ++L +NG Y +IIHA
Sbjct: 334 CTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHC 393
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY 356
SG+ + +E+ H +E + G++ Y +M GY
Sbjct: 394 QSGNMDRAEEL----------VHEME-----EDGIDAPIDAYHSMMHGY 427
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 134/301 (44%), Gaps = 31/301 (10%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN +++ + +M A+ + +++ GL PS ++ LM GY + GD+D
Sbjct: 132 YPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S + A + M GL P+ T+T L+
Sbjct: 192 RLKSAMHASGVQPDVYT-YSVLINGL--CKESKVDEANELFNEMLDRGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNIC 328
+ K+G +DS + Q S + D Y +I+ L G + +V A++
Sbjct: 249 DVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGD---LKQVRALI------ 299
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDII 385
MS GL+P TYT L+ G K GD+++ R+ + + L N Y ++
Sbjct: 300 ------DEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALV 353
Query: 386 HALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSAN 442
L G + +++ ++ VG D + I KG + A R++ + R +
Sbjct: 354 SGLCQEGRADDAEKMFREMLS-VGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGH 412
Query: 443 I 443
+
Sbjct: 413 V 413
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTF------TTLIDVHCKNGMVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M + F +N LIYG + D+ ++ MS GL+P TYT L+
Sbjct: 259 SAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ + + +K L + ++ ++ L +D AE + M G
Sbjct: 319 DGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRAD--DAEKMFREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + RLL +
Sbjct: 377 LKPDNGTYTMIINEFCKKGDVRTASRLLKE 406
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/304 (20%), Positives = 119/304 (39%), Gaps = 34/304 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N ++ + + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M ++ LI G + + + A + M GL P+
Sbjct: 183 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV-----SSDMASAEG 250
T+T L+ + K+G +DS + Q FS L L+ D+
Sbjct: 243 TFTTLIDVHCKNGMVDSAMEIYKQMLSQG-----FSPDLITYNTLIYGLCKKGDLKQVRA 297
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALA 307
++ MS GL+P TYT L+ G K GD+++ R+ + + L N Y ++ L
Sbjct: 298 LIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLC 357
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
G + +++ M GL+P TYT ++ + K GD+ + R
Sbjct: 358 QEGRADDAEKMFR---------------EMLSVGLKPDNGTYTMIINEFCKKGDVRTASR 402
Query: 368 LLAQ 371
LL +
Sbjct: 403 LLKE 406
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 161/378 (42%), Gaps = 43/378 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ +H + ++E++GI PN VTY S LIS C G A++
Sbjct: 873 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY------SSLISCLCNYGRWSDASR 926
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M ++ F+ALI + + AE + M + ++PS TY+ L+ G+
Sbjct: 927 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 986
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NLLILVSSDMASAE---GILTMMSQAGLE 261
H +D K + + CF +T N LI E + MSQ GL
Sbjct: 987 MHDRLDEAKQMFEFMVSKH----CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 1042
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH------- 311
+ TY L+ G + GD D + + + S V + Y ++ L +G
Sbjct: 1043 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 1102
Query: 312 GEYI--DEVSAIVCFVNICFH-----------WLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
EY+ ++ + NI W +S G++P Y ++ G+ +
Sbjct: 1103 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 1162
Query: 359 HG---DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA 415
G + D++ + + ++G+ +G Y +I A G E E+I +++ G++ DA+
Sbjct: 1163 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS-CGFAGDAS 1221
Query: 416 N--HIYHLINKGQIDAAY 431
+ ++++ G++D ++
Sbjct: 1222 TIGLVTNMLHDGRLDKSF 1239
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 139/365 (38%), Gaps = 43/365 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YNA++ + DF ++E +GI PN VTY + L++ C
Sbjct: 292 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY------TALVNGLCNSSRWS 345
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M K + ++AL+ + + A+ + M + ++P TY+ L+
Sbjct: 346 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 405
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G H +D + + L S+ + + + MSQ GL
Sbjct: 406 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 465
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY---- 314
+ TY L+ G+ + GD+D + +Q ++ D Y ++ L +G E
Sbjct: 466 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 525
Query: 315 ----------IDEVSAIVCFVNICFH------WLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+D V+ +C W +S GL+P TYT +M G
Sbjct: 526 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 585
Query: 359 HGDMDSIRRL--------LAQNGSSLVNGDYL---DIIHALAVSGHGEYIDEIISKIQPG 407
G + + L L +N +L +GD ++I + G Y ++ I+ G
Sbjct: 586 KGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCG---YAPSLLKDIKSG 642
Query: 408 VGYSA 412
V A
Sbjct: 643 VCKKA 647
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 116/303 (38%), Gaps = 38/303 (12%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L +P + Y+ L+ + L K+ G EPN VT S L++ YC
Sbjct: 724 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTL------SSLLNGYCH 777
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
I A +++ M + + FN LI+G N + A ++ M G +P T
Sbjct: 778 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 837
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSEL---FLCFSFQLTNLLILVSSDMASAEGILT 253
Y ++ G K GD D + + + Q +L L ++ + L M A +
Sbjct: 838 YGVVVNGLCKRGDTD-LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY--KHMDDALNLFK 894
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSG 310
M G+ P+ TY+ L+ +G RLL+ +N D + +I A G
Sbjct: 895 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 954
Query: 311 H----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
+ DE M + ++PS TY+ L+ G+ H +D +
Sbjct: 955 KLVEAEKLYDE-------------------MVKRSIDPSIVTYSSLINGFCMHDRLDEAK 995
Query: 367 RLL 369
++
Sbjct: 996 QMF 998
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 120/310 (38%), Gaps = 48/310 (15%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L + D+ +N ++ + L K+ G EP+RVT L++ +C+
Sbjct: 217 LGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNG------FCR 270
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+ A +++ M + + +NA+I + + A + + G+ P+ T
Sbjct: 271 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 330
Query: 197 YTKL---MCGYAKHGDM-----DSIKTKI-PSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
YT L +C ++ D D IK KI P++ S L F + + +
Sbjct: 331 YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF---------VKNGKVLE 381
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
A+ + M + ++P TY+ L+ G H +D ++ L
Sbjct: 382 AKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF-----------------DLM 424
Query: 308 VSGHGEYIDEVSAIVCFVNIC-FHWLEGPM-----MSQAGLEPSAQTYTKLMCGYAKHGD 361
VS G D VS C +E M MSQ GL + TY L+ G+ + GD
Sbjct: 425 VS-KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 483
Query: 362 MDSIRRLLAQ 371
+D + +Q
Sbjct: 484 VDKAQEFFSQ 493
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 91/222 (40%), Gaps = 16/222 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L++ + + + ++ +G+ N VTY LI Q G+ +
Sbjct: 1009 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG------LFQAGDCD 1062
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M P + +N L+ G + + A + + ++ +EP+ TY ++
Sbjct: 1063 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 1122
Query: 202 CGYAKHGDMDS-----IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
G K G ++ + +KP + ++ ++ S + A+ + M
Sbjct: 1123 EGMCKAGKVEDGWDLFCNLSLKGVKPD---VVAYNTMISGFCRKGSKE--EADALFKEMK 1177
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD 298
+ G P++ Y L+ + GD ++ L+ + S GD
Sbjct: 1178 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 1219
Score = 42.7 bits (99), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 101/268 (37%), Gaps = 28/268 (10%)
Query: 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEG 180
+ +I SKL+S + + + E M++ P + ++ LI + + + A
Sbjct: 692 FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA 751
Query: 181 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLT 235
+L M + G EP+ T + L+ GY + + + +P + F
Sbjct: 752 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF-------- 803
Query: 236 NLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
N LI + + + A ++ M G +P TY ++ G K GD D LL +
Sbjct: 804 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 863
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
+ L I+ + G +Y A+ F M G+ P+ TY+ L
Sbjct: 864 GKLEPGVL--IYNTIIDGLCKYKHMDDALNLF----------KEMETKGIRPNVVTYSSL 911
Query: 353 MCGYAKHGDMDSIRRLLAQNGSSLVNGD 380
+ +G RLL+ +N D
Sbjct: 912 ISCLCNYGRWSDASRLLSDMIERKINPD 939
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 130/333 (39%), Gaps = 37/333 (11%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L + + +N ++ V DF+ +E+ G++PN VTY ++ YC
Sbjct: 215 LRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHG------YCS 268
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G +E A IL M+ + + +LI G + + A I M Q GL PSA
Sbjct: 269 SGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVI 328
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSL--KPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
Y L+ G+ G++D + K S ++ + L + +D AE ++
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTD--EAECMIKE 386
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGH 311
+ + G+ P A TY L+ GY + + L + SG Y ++H L+
Sbjct: 387 IQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNR 446
Query: 312 GEYIDEVSA----------IVCF------------VNICFHWLEGPMMSQAGLEPSAQTY 349
+ D++ ++ F V F L+ M + + P T+
Sbjct: 447 MKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKD--MDRMKVPPDEVTF 504
Query: 350 TKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL 382
+M G+ + G ++ R L + + D++
Sbjct: 505 NTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 10/193 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +LL V D K+ S+G+ P+ + + LI +C + N++GA +
Sbjct: 434 YTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDG------HCSNSNVKGAFE 487
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M P E FN ++ GH + + A + M + G++P ++ L+ GY+
Sbjct: 488 LLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYS 547
Query: 206 KHGDM-DSIKTKIPSLKPQ-SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
+ GD+ D+ + + L + L ++ + L D+ AE +L M G+ P
Sbjct: 548 RRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDL--AEELLKEMVSKGMTPD 605
Query: 264 AQTYTKLMCGYAK 276
TY L+ G AK
Sbjct: 606 DTTYFTLIEGIAK 618
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 128/328 (39%), Gaps = 62/328 (18%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I N+LL ++L T + A++ I+ + T+ + +I+ C++G ++
Sbjct: 186 IETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTF------NIMINVLCKEGKLKK 239
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + M + +N +++G+ + + +A+ ILT M + +EP + TY L+
Sbjct: 240 AKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLIS 299
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
G K G ++ A I M Q GL P
Sbjct: 300 GMCKQGRLE-----------------------------------EASKIFEEMVQKGLRP 324
Query: 263 SAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
SA Y L+ G+ G++D + + + + G S Y +IHAL + + DE
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFME---QRTDEAE 381
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSL 376
++ + + G+ P A TY L+ GY + + L + +G
Sbjct: 382 CMI------------KEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKP 429
Query: 377 VNGDYLDIIHALAVSGHGEYIDEIISKI 404
Y ++H L+ + D++ KI
Sbjct: 430 TKKTYTSLLHVLSKKNRMKEADDLFKKI 457
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 118/289 (40%), Gaps = 44/289 (15%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+S YN+L+ + T + +++ +GI P+ +TY LI+ YC+ N +
Sbjct: 361 MSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING------YCRCANAKK 414
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + + M ++ + +L++ S+ N M A+ + ++ G+ P + L+
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALID 474
Query: 203 GYAKHG----------DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
G+ + DMD +K P E+ +F + A +
Sbjct: 475 GHCSNSNVKGAFELLKDMDRMKV------PPDEV----TFNTIMQGHCREGKVEEARELF 524
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVS 309
M + G++P ++ L+ GY++ GD+ VR + +G + Y ++ L +
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
G+ +E L M+S+ G+ P TY L+ G AK
Sbjct: 585 QEGDLAEE--------------LLKEMVSK-GMTPDDTTYFTLIEGIAK 618
>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
Length = 825
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 178/446 (39%), Gaps = 55/446 (12%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK 129
F+V E VP D +N L+ Y + QG+ P+ +T+ S
Sbjct: 387 FNVMVCEGVVP-DRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITF------ST 439
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+IS +C+ G ++ A + M D P V++ LI G D+ A+ +++ M G
Sbjct: 440 VISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG 499
Query: 190 LEPSA-QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMAS 247
+ P + +T ++ K G + K + + + +F L + LV +M
Sbjct: 500 IPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVG-NMKE 558
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIH 304
A G+L M G+EP TY L+ GY KHG +D ++ R + +L + Y I+H
Sbjct: 559 AVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILH 618
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
L + E+ FH M ++G+ S TY ++ G ++ D
Sbjct: 619 GLFQARRTIVAKEM----------FHE-----MIESGMAVSIHTYATVLGGLCRNNCTDE 663
Query: 365 IRRLLAQNGSSLVNGDYLD---IIHALAVSGHGEYIDEIISKIQ-----PGV-------- 408
LL + S V D L +I A+ G + E+ + I P +
Sbjct: 664 ANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMIT 723
Query: 409 ----GYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
S + A++++ + K RI+N + R GE G +L K ++
Sbjct: 724 NLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYL----SKIDKK 779
Query: 465 GVGYSADAANHIYHLINKGQIDAAYR 490
G+ A + + +L + ++ YR
Sbjct: 780 GILPEATTTSLLIYLFS---VNGKYR 802
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 109/289 (37%), Gaps = 18/289 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YNAL+ + D K+E QGI PN VTY S LI+ C+ ++
Sbjct: 223 DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTY------SSLINGLCKTKEMD 276
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M + +N LI+G+S + + + MS + L P M
Sbjct: 277 KAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFM 336
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
KHG + + S+ + S+ + +A + + +M G+
Sbjct: 337 TALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVV 396
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P + L+ YA+ G MD + VN D + ++ +D+ A+
Sbjct: 397 PDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDD--AM 454
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
F + M G+ P Y+ L+ G D+ + L++
Sbjct: 455 EKFNH----------MIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELIS 493
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 115/290 (39%), Gaps = 36/290 (12%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I YN L+ Y +L G+ P+ +Y LI + ++G ++
Sbjct: 189 IYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDG------FSKEGEVDK 242
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + M ++ + +++LI G + +M AE +L M AG+ P+ TY L+
Sbjct: 243 AHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIH 302
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFL------CFSFQLTNLLILVSSDMASAEGILTMMS 256
GY+ G K + K S L C SF + + A I M
Sbjct: 303 GYSTSG---MWKESVRVFKEMSSSLLVPDVGNCNSFMTA---LCKHGRIKEARDIFDSMV 356
Query: 257 QAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
G +P +Y L+ GYA G MD++ ++ G + +I+A A G +
Sbjct: 357 LKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMD 416
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+++ F + M++ G+ P T++ ++ + + G +D
Sbjct: 417 -----KSLLMFED----------MTKQGVNPDIITFSTVISAFCRLGRLD 451
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 102/279 (36%), Gaps = 36/279 (12%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL- 220
+NALI G S+ ++ A + M + G+ P+ TY+ L+ G K +MD + + +
Sbjct: 227 YNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV 286
Query: 221 ----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
+P + + C + S + + MS + L P M K
Sbjct: 287 GAGVRPNNMTYNCLIHGYST-----SGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCK 341
Query: 277 HGDMDSVRRLLAQSGSSLVNGDYLDII------HALAVSGHGEYIDEV-SAIVCFVNICF 329
HG + R + S ++ G D+I H A +G +D + + +VC
Sbjct: 342 HGRIKEARDIF---DSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVC------ 392
Query: 330 HWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALA 389
G+ P + L+ YA+ G MD + VN D + ++
Sbjct: 393 ----------EGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVIS 442
Query: 390 VSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQID 428
+D+ + K + +Y + +GQ +
Sbjct: 443 AFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 481
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 148/341 (43%), Gaps = 49/341 (14%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL++++ +G+ P+ VTY + LIS Y G +E A +++ M K F +N
Sbjct: 247 FLSEVQEKGVYPDIVTY------NTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNT 300
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+I G + A+ + M ++GL P + TY L+ K GD + ++ +
Sbjct: 301 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRD 360
Query: 225 EL--FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD- 281
+ +CFS ++ L S ++ A + +AGL P YT L+ GY + G +
Sbjct: 361 VVPDLVCFSSMMS--LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISE 418
Query: 282 --SVRRLLAQSGSSLVNGDYLDIIHALA--------------VSGHGEYIDEVSAIVCFV 325
++R + Q G ++ Y I+H L ++ G + D + +
Sbjct: 419 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILID 478
Query: 326 NIC-FHWLEGPM-----MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG 379
C L+ M M + ++ TY L+ G+ K GD+D+ + + A +V+
Sbjct: 479 GHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWAD----MVSK 534
Query: 380 DYLD-------IIHALAVSGH----GEYIDEIISK-IQPGV 408
+ L +++AL GH DE+ISK I+P V
Sbjct: 535 EILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTV 575
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N++++ Y + + FL K+ S+G P+ ++Y LI + ++ N+ A +
Sbjct: 579 NSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYG------FVKEENMSKAFGL 632
Query: 147 LEFMRDKTFPISEGVF--NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
++ M +K + VF N++++G + N M AE +L M + G+ P TYT L+ G+
Sbjct: 633 VKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGF 692
Query: 205 AKHGDM 210
++
Sbjct: 693 VSQDNL 698
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 96/249 (38%), Gaps = 54/249 (21%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
GNL E + LD+ YN LL + + + A + S+ I P +++
Sbjct: 484 GNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISF 543
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
S L++ C G++ A ++ + M K+ + + N++I G+ ++ + + E
Sbjct: 544 ------SILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIF 597
Query: 182 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV 241
L M G P +Y L+ G+ K
Sbjct: 598 LEKMISEGFVPDCISYNTLIYGFVKE---------------------------------- 623
Query: 242 SSDMASAEGILTMM--SQAGLEPSAQTYTKLMCGYAKHGDM---DSVRRLLAQSG----- 291
+M+ A G++ M Q GL P TY ++ G+ + M ++V R + + G
Sbjct: 624 -ENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDR 682
Query: 292 ---SSLVNG 297
+SL+NG
Sbjct: 683 STYTSLING 691
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 57/308 (18%), Positives = 117/308 (37%), Gaps = 33/308 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L++ Y + ++ QG + VTY ++ C+ + A K
Sbjct: 403 YTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHG------LCKRKMLGEADK 456
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M ++ LI GH + ++ +A + M + ++ TY L+ G+
Sbjct: 457 LFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFG 516
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K GD+D+ K + + L SF + + ++ A + M ++P+
Sbjct: 517 KVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVM 576
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIV 322
++ GY + G+ L + S D Y +I+ ++ E +
Sbjct: 577 ICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYG--------FVKEEN--- 625
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM---DSIRRLLAQNG------ 373
++ F ++ Q GL P TY ++ G+ + M +++ R + + G
Sbjct: 626 --MSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRS 683
Query: 374 --SSLVNG 379
+SL+NG
Sbjct: 684 TYTSLING 691
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 112/289 (38%), Gaps = 59/289 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ + L ++ S+GI P+ V Y + LI +C+ GN+ A +
Sbjct: 326 YNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIY------TTLIDGFCKLGNVSSAYR 379
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M+ + + A+I G Q + A+ + M LEP TYT L+ GY
Sbjct: 380 LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYC 439
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G M +F L N M Q GL P+
Sbjct: 440 KEGKMKE------------------AFSLHN-----------------QMLQMGLTPNIV 464
Query: 266 TYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TYT L G K G++D+ LL + G L Y +++ L +G+ ID+ ++
Sbjct: 465 TYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGN---IDQAVKLM 521
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M AG P A TYT LM Y K +M LL Q
Sbjct: 522 ------------KDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ 558
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 114/289 (39%), Gaps = 24/289 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y AL+ Y ++ G+ PN VTY + L C+ G ++ A +
Sbjct: 431 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTY------TALADGLCKCGEVDTANE 484
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M K ++ +N+L+ G +A ++ A ++ M AG P A TYT LM Y
Sbjct: 485 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 544
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K +M + + + +F + +S + E +L M + G+ P+A
Sbjct: 545 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 604
Query: 266 TYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TY L+ Y +M + + R + G + +G+ +I+ + GH + + A
Sbjct: 605 TYNSLIKQYCIRNNMRATTEIYRGMCAKG-VVPDGNTYNIL----IKGHCKARNMKEA-- 657
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
W M G + +Y L+ G+ K R L Q
Sbjct: 658 --------WFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQ 698
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 24/220 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ L+I YN+L+ + + +E G P+ VTY + L+ YC+
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY------TTLMDAYCKSR 547
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A ++L M D+ + FN L+ G + + E +L M + G+ P+A TY
Sbjct: 548 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 607
Query: 199 KLMCGYAKHGDMDSIKTKI------PSLKPQSELFLCFSFQLTNLLI---LVSSDMASAE 249
L+ Y +M + T+I + P + N+LI + +M A
Sbjct: 608 SLIKQYCIRNNMRAT-TEIYRGMCAKGVVPDGNTY--------NILIKGHCKARNMKEAW 658
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ M G + +Y L+ G+ K R L Q
Sbjct: 659 FLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQ 698
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+L++ Y + + T+ + ++G+ P+ TY LI +C+ N++ A
Sbjct: 606 YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKG------HCKARNMKEAWF 659
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+ M K F ++ +NALI G + A + M + GL + Y
Sbjct: 660 LHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIY 711
>gi|255551665|ref|XP_002516878.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543966|gb|EEF45492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 714
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 110/270 (40%), Gaps = 32/270 (11%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ Y + IE I M+ K + FN L+ +S+ E +L M AG
Sbjct: 374 LMDAYNKSNQIEEVEGIFAEMKAKGLKPTSATFNILMDAYSRRMQPEIVEELLLEMQDAG 433
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS------IKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
L+P A++YT L+ Y + M ++ K +KP S + + VS
Sbjct: 434 LQPDAKSYTCLISAYGRQNKMTDMAANAFLRMKKVGIKPTSHSYTALIHAYS-----VSG 488
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD-- 301
A M G++PS +TYT L+ + + GD ++ R+ S V G +
Sbjct: 489 WHEKAYSTFENMQTEGIKPSIETYTALLDAFRRSGDTQTLMRIWKMMMSEKVEGTRVTFN 548
Query: 302 -IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
++ A GH Y++ I F + GL P+ TY LM YA+ G
Sbjct: 549 ILLDGFAKQGH--YVEARDVISEF-------------GKLGLHPTVMTYNMLMNAYARGG 593
Query: 361 DMDSIRRLLAQNGSSLVNGD---YLDIIHA 387
+ +LL + + + D YL +I+A
Sbjct: 594 QHSKLPQLLKEMATLNLKPDSITYLTMIYA 623
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 27/272 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE--GA 143
+N L+ Y + L +++ G++P+ +Y + LIS Y + + A
Sbjct: 406 FNILMDAYSRRMQPEIVEELLLEMQDAGLQPDAKSY------TCLISAYGRQNKMTDMAA 459
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
L + P S + ALI+ +S + A M G++PS +TYT L+
Sbjct: 460 NAFLRMKKVGIKPTSHS-YTALIHAYSVSGWHEKAYSTFENMQTEGIKPSIETYTALLDA 518
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
+ + GD ++ + + +F + A +++ + GL P+
Sbjct: 519 FRRSGDTQTLMRIWKMMMSEKVEGTRVTFNILLDGFAKQGHYVEARDVISEFGKLGLHPT 578
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSA 320
TY LM YA+ G + +LL + + + D YL +I+A YI
Sbjct: 579 VMTYNMLMNAYARGGQHSKLPQLLKEMATLNLKPDSITYLTMIYA--------YI----R 626
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
+ F F+ M ++G P A++Y KL
Sbjct: 627 VRDFRRAFFY---HKTMVKSGQVPDAKSYEKL 655
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 139/330 (42%), Gaps = 29/330 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN ++ + + L+++E+ GI PN TY S +I CQ G E
Sbjct: 418 DTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTY------SIMIHGLCQSGEPE 471
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A+ +LE M K + V+ LI G+ + +++ A I M++ + P Y L+
Sbjct: 472 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 531
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G +K G ++ ++ + L F++ L + D+ SAE ++ M GL+
Sbjct: 532 FGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLK 591
Query: 262 PSAQTYTKLMCGYAKHGDMDSV----RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
P+ Y L+ Y K D++ V + +L Q G L N Y +IH L+ SG+ E
Sbjct: 592 PNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQ-GVMLDNRIYGILIHNLSSSGNME---- 646
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
F L G + + G P Y+ L+ G K D + +L + V
Sbjct: 647 ---------AAFRVLSG--IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGV 695
Query: 378 NGD---YLDIIHALAVSGHGEYIDEIISKI 404
+ + Y +I L SG Y + + I
Sbjct: 696 DPNIVCYNALIDGLCKSGDISYARNVFNSI 725
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 154/351 (43%), Gaps = 72/351 (20%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFM-RDKTFPISEGVFN 163
+ ++ + G++PN++TY L+ C+ G ++ A+ +L+ M RD P +N
Sbjct: 371 MIKEMVAAGVQPNKITYDNLVRG------LCKMGQMDRASLLLKQMVRDSHRP-DTITYN 423
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
+I GH + + A +L+ M AG+ P+ TY+ ++ G + G+ P+
Sbjct: 424 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGE------------PE 471
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
A +L M+ GL+P+A Y L+ GY + G++
Sbjct: 472 -----------------------KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLA 508
Query: 284 RRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
+ + V D Y +I L+ G E + A M +
Sbjct: 509 CEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFA---------------QMQER 553
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN-GSSLVNGD--YLDIIHALAVSGHGEYI 397
GL P+ TY+ L+ GY K+GD++S +L+ + + L D Y+D++ + S + I
Sbjct: 554 GLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKS---DDI 610
Query: 398 DEIISKIQPGVGYSADAANHIY-----HLINKGQIDAAYRIVNTLARSANI 443
+++ S + + N IY +L + G ++AA+R+++ + ++ ++
Sbjct: 611 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSV 661
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 124/300 (41%), Gaps = 63/300 (21%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI---------------------- 140
+D L ++ ++G++PN Y + LIS YC++GN+
Sbjct: 474 SDLLEEMTTKGLKPNAFVY------APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCY 527
Query: 141 -------------EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
E +TK M+++ +E ++ LI+G+ + D+ SAE ++ M
Sbjct: 528 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 587
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF--LCFSFQLTNLLILVSSDM 245
GL+P+ Y L+ Y K D++ + + S+ Q + + + NL S +M
Sbjct: 588 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL--SSSGNM 645
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDI 302
+A +L+ + + G P Y+ L+ G K D + +L + V+ + Y +
Sbjct: 646 EAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 705
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
I L SG Y V F +I GL P+ TYT L+ G K GD+
Sbjct: 706 IDGLCKSGDISYARNV-----FNSIL----------AKGLVPNCVTYTSLIDGSCKVGDI 750
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 108/266 (40%), Gaps = 32/266 (12%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
GI P+ TY S LI YC+ + A K+L MR++ ++ +N LI G ++
Sbjct: 239 GISPDVYTY------STLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS 292
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT-----KIPSLKPQSELF 227
+ A G M GL P TY L+ G K + K LKP ++
Sbjct: 293 GAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVY 352
Query: 228 LCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
NL+ + + A ++ M AG++P+ TY L+ G K G MD
Sbjct: 353 -------ANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASL 405
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
LL Q D I + L + GH + + A F L M AG+ P+
Sbjct: 406 LLKQMVRDSHRPD--TITYNLIIEGHFRHHSKKDA--------FRLLSE--MENAGISPN 453
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQ 371
TY+ ++ G + G+ + LL +
Sbjct: 454 VYTYSIMIHGLCQSGEPEKASDLLEE 479
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 142/328 (43%), Gaps = 25/328 (7%)
Query: 46 FVY--LNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPT 103
FVY L S +C E G +L CE F T +++V D+ YN+L+ T
Sbjct: 490 FVYAPLISGYCRE---GNVSLACE-IFDKMT-KVNVLPDLYCYNSLIFGLSKVGRVEEST 544
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ A+++ +G+ PN TY S LI Y ++G++E A ++++ M D ++ ++
Sbjct: 545 KYFAQMQERGLLPNEFTY------SGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 598
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
L+ + +++D+ M G+ + Y L+ + G+M++ + ++
Sbjct: 599 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKN 658
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ + + ++D A GIL MS+ G++P+ Y L+ G K GD+
Sbjct: 659 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 718
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
R + S L G + + + ID + N + + E M G+
Sbjct: 719 RNVF---NSILAKGLVPNCVT------YTSLIDGSCKVGDISNAFYLYNE---MLATGIT 766
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
P A Y+ L G + GD++ L+ +
Sbjct: 767 PDAFVYSVLTTGCSSAGDLEQAMFLIEE 794
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 12/242 (4%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ Y + G ++ A +++ MRD+ S NAL+ +A+ MA + M AG
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+ P TY+ L+ Y K + D+ K + ++ + ++ + + S + A
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 299
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
G M GL P TY L+ G K + + LL + + + + +++A +
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV--VVYANLID 357
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G ++ E +A F I M AG++P+ TY L+ G K G MD LL
Sbjct: 358 G---FMREGNADEAFKMI-------KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLL 407
Query: 370 AQ 371
Q
Sbjct: 408 KQ 409
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 20/200 (10%)
Query: 95 DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT 154
D E F D ++K +G++PN V Y LI C+ G+I A + + K
Sbjct: 679 DREKAFGILDEMSK---KGVDPNIVCYNALIDG------LCKSGDISYARNVFNSILAKG 729
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
+ + +LI G + D+++A + M G+ P A Y+ L G + GD++
Sbjct: 730 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 789
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVS-----SDMASAEGILTMMSQAGLEPSAQTYTK 269
I E+FL +++ LV M +L ++ GL P+A T
Sbjct: 790 FLI------EEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIEN 843
Query: 270 LMCGYAKHGDMDSVRRLLAQ 289
++ G ++ G + V + +
Sbjct: 844 IISGLSEAGKLSEVHTIFVE 863
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 153/376 (40%), Gaps = 31/376 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQG--IEPNRVTYQQLISNSKLISK 133
EL D+ Y LL+ + + + + G PN V+Y + +I
Sbjct: 208 ELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSY------TTVIHG 261
Query: 134 YCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPS 193
+ ++G++ A + M D P + N++I G + M AE +L M + P+
Sbjct: 262 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 321
Query: 194 AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
TY L+ GY G + + + ++ + + S A A I
Sbjct: 322 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFN 381
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
M Q+G +P+A TY L+ GYA G DM++V+ L+ Q+G + G ++ I A
Sbjct: 382 SMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNG--MRPGRHVFNIEIYAYCK 439
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
G +DE S L M Q G P YT ++ G K G +D
Sbjct: 440 CGR-LDEAS------------LTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFC 486
Query: 371 QNGSSLVNGDYL---DIIHALAVSGHGEYIDEIISKIQP-GVGYSADAANH-IYHLINKG 425
Q ++ D + +IH A+ G E +E+ ++ G+ + + N I L +G
Sbjct: 487 QMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEG 546
Query: 426 QIDAAYRIVNTLARSA 441
++ A ++ + + R+
Sbjct: 547 KVTEARKLFDLMPRAG 562
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/311 (19%), Positives = 109/311 (35%), Gaps = 47/311 (15%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI---------------- 125
+ + YN+L+ YL + L ++ G PN VTY LI
Sbjct: 321 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIF 380
Query: 126 -------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
+ L+ Y +GN+ + + M VFN IY + +
Sbjct: 381 NSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKC 440
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+ A M Q G P YT ++ G K G +D ++ + +F
Sbjct: 441 GRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITF 500
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR---LLAQ 289
+ AE + M G+ P+ T+ ++ K G + R+ L+ +
Sbjct: 501 NTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPR 560
Query: 290 SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY 349
+G+ Y +IH ++G EV ++ ++ M GL+P+A T+
Sbjct: 561 AGAKPNVVSYNTMIHGYFIAG------EVGEVMKLLDD---------MLLIGLKPTAVTF 605
Query: 350 TKLMCGYAKHG 360
L+ G G
Sbjct: 606 NTLLDGMVSMG 616
Score = 42.7 bits (99), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 74/184 (40%), Gaps = 22/184 (11%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
++ G+ P+ +T+ LI L K+ E A ++ M D+ P + FN++
Sbjct: 485 FCQMIDDGLSPDIITFNTLIHGFALHGKW------EKAEELFYEMMDRGIPPNVNTFNSM 538
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I + + A + +M +AG +P+ +Y ++ GY G++ + + +
Sbjct: 539 IDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM----- 593
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
LLI + + +L M GL+P T L+ + G ++ +
Sbjct: 594 -----------LLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILT 642
Query: 286 LLAQ 289
L +
Sbjct: 643 LFRE 646
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 150/374 (40%), Gaps = 49/374 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN ++ +T D K+E G +P+ VTY +I + C+D +
Sbjct: 192 NVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDS------LCKDRLVN 245
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + L M D+ P + +N +++G + A + M + P T T L+
Sbjct: 246 DAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILV 305
Query: 202 CGYAKHGDMDSIKTKI---------PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
G K G + + P++ + L + Q M A+ +
Sbjct: 306 DGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRL---------MNEAKKVF 356
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
+M + G P +Y L+ G+ K MD + LLA+ +N D + ++ + G
Sbjct: 357 EIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPD--TVTYSTLMQGLC 414
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
++ A+ F +C + GL P+ TY+ L+ G+ KHG +D +LL
Sbjct: 415 QFGRPKEALNIFKEMCSY----------GLLPNLVTYSILLDGFCKHGHLDEALKLLKSM 464
Query: 373 GSSLVNGDYLD---IIHALAVSGHGEYIDEIISK-----IQPGV-GYSADAANHIYHLIN 423
+ + + +I + ++G E E+ SK I+P + Y+ I L+
Sbjct: 465 QEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTV----MIKGLLK 520
Query: 424 KGQIDAAYRIVNTL 437
+G D AY + +
Sbjct: 521 EGLSDEAYDLFRKM 534
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 98/248 (39%), Gaps = 28/248 (11%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI+ C+ +++ A IL M + FNALI G + A + M + G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLI--LVS 242
EP+ +Y ++ G K G+ K + KP + N +I L
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTY--------NTIIDSLCK 240
Query: 243 SDMAS-AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD 301
+ + A L+ M G+ P+ TY ++ G+ G ++ RL + +V D +
Sbjct: 241 DRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKE----MVGRDVMP 296
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
L + G + +V + F M++ G+EP+ TY LM GY
Sbjct: 297 DTVTLTILVDGLCKE---GMVSEARLVFET-----MTEKGVEPNISTYNALMDGYCLQRL 348
Query: 362 MDSIRRLL 369
M+ +++
Sbjct: 349 MNEAKKVF 356
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 28/287 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN L+ + L +++ + P TY + ++ Y + G+I+
Sbjct: 375 DIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETY------TSILDGYVKGGHIQ 428
Query: 142 GATKILEFMRDKTFPISEGV--FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
A ++ F R KT + GV +N+L+ G ++A M +A +L M G+ P+ ++YT
Sbjct: 429 KALEV--FDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTA 486
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L GYA+ GD++ +K ++ ++ S M A + ++ AG
Sbjct: 487 LTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAG 546
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEYID 316
L+ + TY ++ G+A+ G++ R LL + G L Y I A SG E +
Sbjct: 547 LKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVT 606
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
E A+ M + LE +A+TYT L+ G+ D D
Sbjct: 607 ETLAV---------------MREKKLEVNARTYTTLIHGWLAAADPD 638
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 143/330 (43%), Gaps = 41/330 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +++++ + D L +++ G+ PN++ Y ++ Y + G+ A K
Sbjct: 309 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDG------YARGGDFTAAFK 362
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M +N L++ +A M A G+L + L P+ +TYT ++ GY
Sbjct: 363 VWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYV 422
Query: 206 KHGDM-------DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
K G + D IKT L+P + ++ L+ L + M +A +L M
Sbjct: 423 KGGHIQKALEVFDRIKT--AGLRPG---VVSYNSLLSGLA--KARQMENARLMLDEMLAN 475
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
G+ P+ ++YT L GYA+ GD++ + + + D Y ++ A SG +
Sbjct: 476 GVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRA 535
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QN 372
EV F I + AGL+ + TY ++ G+A+ G++ R LL ++
Sbjct: 536 VEV-----FQQI----------TDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKH 580
Query: 373 GSSLVNGDYLDIIHALAVSGHGEYIDEIIS 402
G L Y I A SG E + E ++
Sbjct: 581 GFHLDTICYTSFIKACFRSGDTEEVTETLA 610
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 130/324 (40%), Gaps = 67/324 (20%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ L+ + + +++ Y + + + K +++ + P + Y + ++ YCQ G
Sbjct: 197 IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVY------NSIVQAYCQAG 250
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+E +L M ++ F + G++ ++ G ++ D + GL P+A TY
Sbjct: 251 NMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYG 310
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
++ + K G +MA A IL M +
Sbjct: 311 CIVKLFTKAG-----------------------------------NMAKALDILEEMDKH 335
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE-- 313
G+ P+ Y +M GYA+ GD + ++ S+ + D Y ++HA +G +
Sbjct: 336 GVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKA 395
Query: 314 --YIDEVSA------IVCFVNICFHWLEGPMMSQ----------AGLEPSAQTYTKLMCG 355
++ + A I + +I +++G + + AGL P +Y L+ G
Sbjct: 396 LGVLENIQANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSG 455
Query: 356 YAKHGDMDSIRRLLAQNGSSLVNG 379
AK M++ R +L + L NG
Sbjct: 456 LAKARQMENARLMLDE---MLANG 476
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/283 (19%), Positives = 115/283 (40%), Gaps = 23/283 (8%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ Y + G+ A E MR + ++ +LI+ +++A DM A M G
Sbjct: 137 LVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQG 196
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
++ + + ++ GYA G+ ++ + K ++ + + + +M + E
Sbjct: 197 IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVE 256
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHAL 306
+L M + G + + YT ++ G+A+ D + S L G S Y I+
Sbjct: 257 ALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLF 316
Query: 307 AVSGH-GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
+G+ + +D + M + G+ P+ Y +M GYA+ GD +
Sbjct: 317 TKAGNMAKALDILEE----------------MDKHGVSPNKMIYAMIMDGYARGGDFTAA 360
Query: 366 RRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQ 405
++ S+ + D Y ++HA +G + ++ IQ
Sbjct: 361 FKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQ 403
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 78/185 (42%), Gaps = 14/185 (7%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
++ +DI Y ALL+ + + ++ G++ NR+TY ++ + +
Sbjct: 511 NLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITY------CTMLDGWARK 564
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G + A +L+ M+ F + + + I ++ D L +M + LE +A+TY
Sbjct: 565 GELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTY 624
Query: 198 TKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
T L+ G+ D D + K L+ S L C L+ L+ S + E I
Sbjct: 625 TTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCL---LSGLISCASQNSTLGEKIQ 681
Query: 253 TMMSQ 257
+ ++
Sbjct: 682 AISAE 686
Score = 43.5 bits (101), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 26/208 (12%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+ L+ +++ D +A M + ++P+ YT L+ YA+ DM+ +
Sbjct: 134 YGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEML 193
Query: 222 PQSELFLCFSFQLTNLLIL-VSSDMAS------AEGILTMMSQAGLEPSAQTYTKLMCGY 274
Q QL + + S AS AE L P Y ++ Y
Sbjct: 194 SQ-------GIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAY 246
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
+ G+M++V LLAQ G+ ++ ++G E DE + FH L+
Sbjct: 247 CQAGNMETVEALLAQMEEEGFQGNLG--LYTTVLNGFAEIRDEEKCLS-----FFHRLKA 299
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
GL P+A TY ++ + K G+M
Sbjct: 300 -----CGLSPTAATYGCIVKLFTKAGNM 322
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 119/308 (38%), Gaps = 64/308 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN++L Y +E FL K+ S G+EP+ VTY + L+ C++G A K
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTY------NSLMDYLCKNGRSTEARK 322
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I + M + + L+ G++ + +L +M + G+ P + L+C YA
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K +D E L FS M Q GL P+
Sbjct: 383 KQEKVD-------------EAMLVFS----------------------KMRQHGLNPNVV 407
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE----- 317
TY ++ K G +D Q + + Y +IH+L + + +E
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467
Query: 318 VSAIVCFVNICF------HWLEG---------PMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ +C I F H EG +M + G++P+ TY+ L+ GY G M
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527
Query: 363 DSIRRLLA 370
D +LL+
Sbjct: 528 DEATKLLS 535
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 146/340 (42%), Gaps = 41/340 (12%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
+ ++ +G+ PN + Y LI + + K+ + A +++ M D+ ++ FN+
Sbjct: 428 YFEQMIDEGLTPNIIVYTSLIHSLCIFDKW------DKAEELILEMLDRGICLNTIFFNS 481
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS----- 219
+I+ H + + +E + +M + G++P+ TY+ L+ GY G MD + S
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541
Query: 220 LKPQSELFLCFSFQ-LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+KP C ++ L N VS M A + M +G+ P+ TY ++ G
Sbjct: 542 MKPD-----CVTYNTLINGYCRVSR-MDDALALFKEMVSSGVSPNIITYNIILQGLFHTR 595
Query: 279 DMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
+ + L + +SG+ L Y I+H L DE A+ F N+C
Sbjct: 596 RTAAAKELYVGITKSGTQLELSTYNIILHGLC---KNNLTDE--ALRMFQNLCL------ 644
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL-LAQNGSSLVNGDYLDIIHALAVSGHG 394
L+ +T+ ++ K G D + L +A + + LV + + A + G G
Sbjct: 645 ----TDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQG 700
Query: 395 --EYIDEIISKIQP-GVGYSADAANHIYH-LINKGQIDAA 430
E +D++ ++ G + N I L+ +G+I A
Sbjct: 701 LLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/375 (21%), Positives = 150/375 (40%), Gaps = 32/375 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFL---AKLESQGIEPNRVTYQQLISNSKLIS 132
EL D+ LL+ D + + L A G P+ V+Y + +I+
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSY------TTVIN 204
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ ++G+ + A M D+ ++++I + M A +LT M + G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKP-QSELFLCFSFQLTNLLILVSSDMASAEG- 250
+ TY ++ GY + K I LK +S+ +L+ + + S E
Sbjct: 265 NCMTYNSILHGYCSS---EQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321
Query: 251 -ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
I M++ GLEP TY L+ GYA G + + LL + ++ D+ +
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
E +DE A++ F M Q GL P+ TY ++ K G +D
Sbjct: 382 AKQEKVDE--AMLVF----------SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYF 429
Query: 370 AQNGSSLVNGD---YLDIIHALAVSGHGEYIDE-IISKIQPGVGYSADAANHIYHL-INK 424
Q + + Y +IH+L + + +E I+ + G+ + N I H +
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489
Query: 425 GQIDAAYRIVNTLAR 439
G++ + ++ + + R
Sbjct: 490 GRVIESEKLFDLMVR 504
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 91/242 (37%), Gaps = 41/242 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN+L+ N + + +G+EP+ TY L+ Y G +
Sbjct: 300 DVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATY------CTLLQGYATKGALV 353
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+L+ M VFN LI +++ + A + + M Q GL P+ TY ++
Sbjct: 354 EMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413
Query: 202 CGYAKHGDMDS-------------------IKTKIPSL------KPQSELFL-------C 229
K G +D + I SL EL L C
Sbjct: 414 GILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGIC 473
Query: 230 FSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+ N +I + +E + +M + G++P+ TY+ L+ GY G MD +L
Sbjct: 474 LNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKL 533
Query: 287 LA 288
L+
Sbjct: 534 LS 535
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 98/262 (37%), Gaps = 27/262 (10%)
Query: 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA--LIYGHSQANDMASAEG 180
+ I+ + L+ C D A I+ R VF+ L+ G N A
Sbjct: 121 EAITFTPLLKGLCADKRTSDAMDIV-LRRMTELSCMPDVFSCTILLKGLCDENRSQEALE 179
Query: 181 ILTMMSQ---AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
+L MM+ G P +YT ++ G+ K GD D + + + ++
Sbjct: 180 LLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIA 239
Query: 238 LILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG 297
+ M A +LT M + G+ P+ TY ++ GY L + S V
Sbjct: 240 ALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEP 299
Query: 298 D---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMC 354
D Y ++ L +G E I M++ GLEP TY L+
Sbjct: 300 DVVTYNSLMDYLCKNGRST---EARKIF------------DSMTKRGLEPDIATYCTLLQ 344
Query: 355 GYAKHG---DMDSIRRLLAQNG 373
GYA G +M ++ L+ +NG
Sbjct: 345 GYATKGALVEMHALLDLMVRNG 366
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 161/378 (42%), Gaps = 43/378 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ +H + ++E++GI PN VTY S LIS C G A++
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY------SSLISCLCNYGRWSDASR 312
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M ++ F+ALI + + AE + M + ++PS TY+ L+ G+
Sbjct: 313 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 372
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NLLILVSSDMASAE---GILTMMSQAGLE 261
H +D K + + CF +T N LI E + MSQ GL
Sbjct: 373 MHDRLDEAKQMFEFMVSKH----CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH------- 311
+ TY L+ G + GD D + + + S V + Y ++ L +G
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Query: 312 GEYI--DEVSAIVCFVNICFH-----------WLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
EY+ ++ + NI W +S G++P Y ++ G+ +
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 359 HG---DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA 415
G + D++ + + ++G+ +G Y +I A G E E+I +++ G++ DA+
Sbjct: 549 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR-SCGFAGDAS 607
Query: 416 N--HIYHLINKGQIDAAY 431
+ ++++ G++D ++
Sbjct: 608 TIGLVTNMLHDGRLDKSF 625
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 116/303 (38%), Gaps = 38/303 (12%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L +P + Y+ L+ + L K+ G EPN VT S L++ YC
Sbjct: 110 LGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTL------SSLLNGYCH 163
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
I A +++ M + + FN LI+G N + A ++ M G +P T
Sbjct: 164 SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSEL---FLCFSFQLTNLLILVSSDMASAEGILT 253
Y ++ G K GD D + + + Q +L L ++ + L M A +
Sbjct: 224 YGVVVNGLCKRGDTD-LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY--KHMDDALNLFK 280
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSG 310
M G+ P+ TY+ L+ +G RLL+ +N D + +I A G
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG 340
Query: 311 H----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
+ DE M + ++PS TY+ L+ G+ H +D +
Sbjct: 341 KLVEAEKLYDE-------------------MVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 367 RLL 369
++
Sbjct: 382 QMF 384
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 91/222 (40%), Gaps = 16/222 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L++ + + + ++ +G+ N VTY LI Q G+ +
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG------LFQAGDCD 448
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M P + +N L+ G + + A + + ++ +EP+ TY ++
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 202 CGYAKHGDMDS-----IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
G K G ++ + +KP + ++ ++ S + A+ + M
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPD---VVAYNTMISGFCRKGSKE--EADALFKEMK 563
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD 298
+ G P++ Y L+ + GD ++ L+ + S GD
Sbjct: 564 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 101/268 (37%), Gaps = 28/268 (10%)
Query: 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEG 180
+ +I SKL+S + + + E M++ P + ++ LI + + + A
Sbjct: 78 FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALA 137
Query: 181 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLT 235
+L M + G EP+ T + L+ GY + + + +P + F
Sbjct: 138 VLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTF-------- 189
Query: 236 NLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
N LI + + + A ++ M G +P TY ++ G K GD D LL +
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 249
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
+ L I+ + G +Y A+ F M G+ P+ TY+ L
Sbjct: 250 GKLEPGVL--IYNTIIDGLCKYKHMDDALNLFKE----------METKGIRPNVVTYSSL 297
Query: 353 MCGYAKHGDMDSIRRLLAQNGSSLVNGD 380
+ +G RLL+ +N D
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPD 325
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 118/308 (38%), Gaps = 64/308 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN++L Y +E FL K+ S G+EP+ VTY L+ C++G A K
Sbjct: 269 YNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMD------YLCKNGRSTEARK 322
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I + M + + L+ G++ + +L +M + G+ P + L+C YA
Sbjct: 323 IFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYA 382
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K +D E L FS M Q GL P+
Sbjct: 383 KQEKVD-------------EAMLVFS----------------------KMRQHGLNPNVV 407
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE----- 317
TY ++ K G +D Q + + Y +IH+L + + +E
Sbjct: 408 TYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467
Query: 318 VSAIVCFVNICF------HWLEG---------PMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ +C I F H EG +M + G++P+ TY+ L+ GY G M
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527
Query: 363 DSIRRLLA 370
D +LL+
Sbjct: 528 DEATKLLS 535
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 26/238 (10%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
+ ++ +G+ PN + Y LI + + K+ + A +++ M D+ ++ FN+
Sbjct: 428 YFEQMIDEGLTPNIIVYTSLIHSLCIFDKW------DKAEELILEMLDRGICLNTIFFNS 481
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS----- 219
+I+ H + + +E + +M + G++P+ TY+ L+ GY G MD + S
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541
Query: 220 LKPQSELFLCFSFQ-LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+KP C ++ L N VS M A + M +G+ P+ TY ++ G
Sbjct: 542 MKPD-----CVTYNTLINGYCRVSR-MDDALALFKEMVSSGVSPNIITYNIILQGLFHTR 595
Query: 279 DMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
+ + L + +SG+ L Y I+H L DE A+ F N+C L+
Sbjct: 596 RTAAAKELYVGITKSGTQLELSTYNIILHGLC---KNNLTDE--ALRMFQNLCLTDLQ 648
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 91/242 (37%), Gaps = 41/242 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN+L+ N + + +G+EP+ TY L+ Y G +
Sbjct: 300 DVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATY------CTLLQGYATKGALV 353
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+L+ M VFN LI +++ + A + + M Q GL P+ TY ++
Sbjct: 354 EMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVI 413
Query: 202 CGYAKHGDMDSI-------------------KTKIPSL------KPQSELFL-------C 229
K G +D + I SL EL L C
Sbjct: 414 GILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGIC 473
Query: 230 FSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+ N +I + +E + +M + G++P+ TY+ L+ GY G MD +L
Sbjct: 474 LNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKL 533
Query: 287 LA 288
L+
Sbjct: 534 LS 535
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 154/378 (40%), Gaps = 38/378 (10%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFL---AKLESQGIEPNRVTYQQLISNSKLIS 132
EL D+ LL+ D + + L A G P+ V+Y + +I+
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSY------TTVIN 204
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ ++G+ + A M D+ ++++I + M A +LT M + G+ P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKP-QSELFLCFSFQLTNLLILVSSDMASAEG- 250
+ TY ++ GY + K I LK +S+ +L+ + + S E
Sbjct: 265 NCMTYNSILHGYCSS---EQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321
Query: 251 -ILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
I M++ GLEP TY L+ GYA G +M ++ L+ ++G ++ D+ +
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG---IHPDHHVFNILI 378
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
E +DE A++ F M Q GL P+ TY ++ K G +D
Sbjct: 379 CAYAKQEKVDE--AMLVF----------SKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426
Query: 367 RLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDE-IISKIQPGVGYSADAANHIYHL- 421
Q + + Y +IH+L + + +E I+ + G+ + N I H
Sbjct: 427 LYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSH 486
Query: 422 INKGQIDAAYRIVNTLAR 439
+G++ + ++ + + R
Sbjct: 487 CKEGRVIESEKLFDLMVR 504
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 98/262 (37%), Gaps = 27/262 (10%)
Query: 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA--LIYGHSQANDMASAEG 180
+ I+ + L+ C D A I+ R VF+ L+ G N A
Sbjct: 121 EAITFTPLLKGLCADKRTSDAMDIV-LRRMTELSCMPDVFSCTILLKGLCDENRSQEALE 179
Query: 181 ILTMMSQ---AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
+L MM+ G P +YT ++ G+ K GD D + + + ++
Sbjct: 180 LLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIA 239
Query: 238 LILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG 297
+ M A +LT M + G+ P+ TY ++ GY L + S V
Sbjct: 240 ALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEP 299
Query: 298 D---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMC 354
D Y ++ L +G E I M++ GLEP TY L+
Sbjct: 300 DVVTYNSLMDYLCKNGRST---EARKIF------------DSMTKRGLEPDIATYCTLLQ 344
Query: 355 GYAKHG---DMDSIRRLLAQNG 373
GYA G +M ++ L+ +NG
Sbjct: 345 GYATKGALVEMHALLDLMVRNG 366
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 6/205 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN + R Y N T + K+ ++PN T +IS YC++GN+
Sbjct: 197 DVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTC------GIIISGYCKEGNMP 250
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + L M++ + VFN+LI G+ D + LT+M + G++P T++ +M
Sbjct: 251 EALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIM 310
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
++ G M++ + + ++ + + + AE +LT MS+ G++
Sbjct: 311 NAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQ 370
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRL 286
P+ +T ++ G+ G MD RL
Sbjct: 371 PNVVIFTTIISGWCAAGKMDRAFRL 395
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 103/249 (41%), Gaps = 29/249 (11%)
Query: 51 SKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLE 110
S +C E GN+P F EL V + +N+L++ YLD T + L +E
Sbjct: 241 SGYCKE-----GNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLME 295
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
GI+P+ VT+ S +++ + G +E +I M ++ L G+
Sbjct: 296 EFGIKPDVVTF------STIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYV 349
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKI------PSLK 221
+A AE +LT MS+ G++P+ +T ++ G+ G MD + K+ P+LK
Sbjct: 350 RAGQPRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLK 409
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
L + + AE +LT M + G+ P T + + G
Sbjct: 410 TYETLIWGYG---------EAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFK 460
Query: 282 SVRRLLAQS 290
R+L S
Sbjct: 461 EANRILNGS 469
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 136/334 (40%), Gaps = 41/334 (12%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
L +G +P +TY + L++ + + +L + D + NA+I
Sbjct: 48 LTEEGHKPTLITY------TTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINA 101
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD-MDSIKT-----KIPSLKP 222
S++ + A I M + G +P+ TY L+ G+ G +S+K + ++KP
Sbjct: 102 FSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKP 161
Query: 223 QSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
+ N+LI + A +L M +G++P TY + YA++G+
Sbjct: 162 NDRTY--------NILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGE 213
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+ RL+ + ++V + + + +SG+ + + A+ M +
Sbjct: 214 TERAERLILKMPYNIVKPN--ERTCGIIISGYCKEGNMPEALRFLYR----------MKE 261
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEY 396
G++P+ + L+ GY D + + L + D + I++A + +G E
Sbjct: 262 LGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMEN 321
Query: 397 IDEIISKIQPGVGYSADAANHIYHLINKGQIDAA 430
+EI + + G D H Y ++ KG + A
Sbjct: 322 CEEIFNDMVKA-GIEPDI--HAYSILAKGYVRAG 352
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 117/298 (39%), Gaps = 45/298 (15%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
NA++ + ++ K++ G +P TY LI + G + K+
Sbjct: 96 NAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKG------FGIAGRPYESMKL 149
Query: 147 LEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
LE M +D+ ++ +N LI + A +L M +G++P TY + YA
Sbjct: 150 LEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYA 209
Query: 206 KHGDMDSIKT---KIPS--LKPQSELFLCFSFQLTNLLILVSS-----DMASAEGILTMM 255
++G+ + + K+P +KP I++S +M A L M
Sbjct: 210 QNGETERAERLILKMPYNIVKPNER----------TCGIIISGYCKEGNMPEALRFLYRM 259
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHG 312
+ G++P+ + L+ GY D + V L + D + I++A + +G
Sbjct: 260 KELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLM 319
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
E +E+ F + M +AG+EP Y+ L GY + G LL
Sbjct: 320 ENCEEI-----FND----------MVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLT 362
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 198 RLKSAMLASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLVKGLVPNGVTFTTLI 254
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G IDE
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE------- 307
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+DS R+ + Q L Y
Sbjct: 308 ------------MSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAY 355
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG DA + I KG + +++ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLS-VGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQ 414
Query: 439 RSANI 443
R ++
Sbjct: 415 RDGHV 419
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 211 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF------TTLIDGHCKNGRVD 264
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 324
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+DS + ++ ++ + AE +L M GL+
Sbjct: 325 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P A+TYT ++ + K GD+ +LL +
Sbjct: 385 PDARTYTMIINEFCKKGDVWKGXKLLKE 412
>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
Length = 754
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 178/446 (39%), Gaps = 55/446 (12%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK 129
F+V E VP D +N L+ Y + QG+ P+ +T+ S
Sbjct: 316 FNVMVCEGVVP-DRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITF------ST 368
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+IS +C+ G ++ A + M D P V++ LI G D+ A+ +++ M G
Sbjct: 369 VISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG 428
Query: 190 LEPSA-QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMAS 247
+ P + +T ++ K G + K + + + +F L + LV +M
Sbjct: 429 IPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVG-NMKE 487
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIH 304
A G+L M G+EP TY L+ GY KHG +D ++ R + +L + Y I+H
Sbjct: 488 AVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILH 547
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
L + E+ FH M ++G+ S TY ++ G ++ D
Sbjct: 548 GLFQARRTIVAKEM----------FHE-----MIESGMAVSIHTYATVLGGLCRNNCTDE 592
Query: 365 IRRLLAQNGSSLVNGDYLD---IIHALAVSGHGEYIDEIISKIQ-----PGV-------- 408
LL + S V D L +I A+ G + E+ + I P +
Sbjct: 593 ANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMIT 652
Query: 409 ----GYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 464
S + A++++ + K RI+N + R GE G +L K ++
Sbjct: 653 NLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYL----SKIDKK 708
Query: 465 GVGYSADAANHIYHLINKGQIDAAYR 490
G+ A + + +L + ++ YR
Sbjct: 709 GILPEATTTSLLIYLFS---VNGKYR 731
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 109/289 (37%), Gaps = 18/289 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YNAL+ + D K+E QGI PN VTY S LI+ C+ ++
Sbjct: 152 DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTY------SSLINGLCKTKEMD 205
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M + +N LI+G+S + + + MS + L P M
Sbjct: 206 KAERVLRQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFM 265
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
KHG + + S+ + S+ + +A + + +M G+
Sbjct: 266 TALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVV 325
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P + L+ YA+ G MD + VN D + ++ +D+ A+
Sbjct: 326 PDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDD--AM 383
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
F + M G+ P Y+ L+ G D+ + L++
Sbjct: 384 EKFNH----------MIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELIS 422
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 115/290 (39%), Gaps = 36/290 (12%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I YN L+ Y +L G+ P+ +Y LI + ++G ++
Sbjct: 118 IYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDG------FSKEGEVDK 171
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + M ++ + +++LI G + +M AE +L M AG+ P+ TY L+
Sbjct: 172 AHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIH 231
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFL------CFSFQLTNLLILVSSDMASAEGILTMMS 256
GY+ G K + K S L C SF + + A I M
Sbjct: 232 GYSTSG---MWKESVRVFKEMSSSLLVPDVGNCNSFMTA---LCKHGRIKEARDIFDSMV 285
Query: 257 QAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
G +P +Y L+ GYA G MD++ ++ G + +I+A A G +
Sbjct: 286 LKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMD 345
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+++ F + M++ G+ P T++ ++ + + G +D
Sbjct: 346 -----KSLLMFED----------MTKQGVNPDIITFSTVISAFCRLGRLD 380
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/279 (19%), Positives = 102/279 (36%), Gaps = 36/279 (12%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL- 220
+NALI G S+ ++ A + M + G+ P+ TY+ L+ G K +MD + + +
Sbjct: 156 YNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV 215
Query: 221 ----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
+P + + C + S + + MS + L P M K
Sbjct: 216 GAGVRPNNMTYNCLIHGYS-----TSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCK 270
Query: 277 HGDMDSVRRLLAQSGSSLVNGDYLDII------HALAVSGHGEYIDEV-SAIVCFVNICF 329
HG + R + S ++ G D+I H A +G +D + + +VC
Sbjct: 271 HGRIKEARDIF---DSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVC------ 321
Query: 330 HWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALA 389
G+ P + L+ YA+ G MD + VN D + ++
Sbjct: 322 ----------EGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVIS 371
Query: 390 VSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQID 428
+D+ + K + +Y + +GQ +
Sbjct: 372 AFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCN 410
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 135/315 (42%), Gaps = 29/315 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNA++ L E + A++ + G+ P+ +TY + L+++YC+ GN++ A
Sbjct: 346 YNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITY------NSLLNRYCKAGNLKEALW 399
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L +R + +N LI G+ + D+A A + M + G P TYT LM G
Sbjct: 400 LLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSR 459
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K ++ + + + CF++ L S A + +M G+ P
Sbjct: 460 KVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTV 519
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIV 322
TY ++ G K G++ +RL + S + D Y +IHA G + E +
Sbjct: 520 TYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERG---LLREARKL- 575
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS----IRRLLAQNGSSLVN 378
L G M GL+PS TYT L+ + G++ S R++L G
Sbjct: 576 ---------LNG--MVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKML-DVGIEPNE 623
Query: 379 GDYLDIIHALAVSGH 393
Y +IHAL ++G
Sbjct: 624 ITYNVLIHALCMTGR 638
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 140/379 (36%), Gaps = 103/379 (27%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQG--IEPNRVTYQQLISNSKLISK 133
+L V I YN LL +L + L ++E+QG N VT+ + +IS
Sbjct: 230 QLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTF------NVVISF 283
Query: 134 YCQDGNIEGATKILEFMR----DKTF---PI---------------------SEGV---- 161
++G++E A K+++ MR +F P+ +EG+
Sbjct: 284 LAREGHLENAVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTV 343
Query: 162 --FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS 219
+NA+I+G + +A+ M GL P TY L+ Y K G++
Sbjct: 344 VTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLK-------- 395
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
A +L + +AGL P+ TY L+ GY + GD
Sbjct: 396 ---------------------------EALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGD 428
Query: 280 MDSVRRL---LAQSG--------SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF---V 325
+ RRL + + G + L+NG A+A E + + CF
Sbjct: 429 LAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNT 488
Query: 326 NICFHWL--EGPMMSQ-------AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
IC PM Q G+ P TY ++ G K G++ +RL + S
Sbjct: 489 RICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDG 548
Query: 377 VNGD---YLDIIHALAVSG 392
+ D Y +IHA G
Sbjct: 549 LQPDCITYTCLIHAHCERG 567
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 7/134 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y L+ + + L + S G++P+ VTY L+ C+ GN+
Sbjct: 552 DCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTC------CRRGNLY 605
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A M D +E +N LI+ A M + GL P+ TYT L+
Sbjct: 606 SAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLI 665
Query: 202 CGYAKHGDM-DSIK 214
G + G+ D+I+
Sbjct: 666 DGNCREGNWADAIR 679
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 160/392 (40%), Gaps = 51/392 (13%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ Y ++ N+ D ++ + EPN TY + ++ C++ ++
Sbjct: 319 VRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTY------TVMVDAMCKERKLDE 372
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
+ +IL M +K S +NALI G+ + + +A IL +M P+ +TY +L+C
Sbjct: 373 SRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELIC 432
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQAG 259
G++K + T L E L S N LI V + SA +L ++ + G
Sbjct: 433 GFSKRKHVHKAMT---LLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENG 489
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE--YIDE 317
L P TY+ + K M+ L + + ++++ + GH + IDE
Sbjct: 490 LVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKAN--EVMYTALIDGHCKAGKIDE 547
Query: 318 VSAIV-------CFVN----------ICFHWLEGPM---------MSQAGLEPSAQTYTK 351
+++ C N +C EG + MS+ G++P+ TYT
Sbjct: 548 AISLLERMHSEDCLPNSSTYNSLIYGVC---KEGKVQEGLSMVENMSKMGVKPTVATYTI 604
Query: 352 LMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISK-IQPG 407
L+ + GD D R+ Q S D Y IH SG+ + + ++++ I+ G
Sbjct: 605 LIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAG 664
Query: 408 VGYSADAANHIYHLINKGQIDAAYRIVNTLAR 439
V D+ + + ++ AY N L R
Sbjct: 665 V--MPDSLTYTLLISAYERLGLAYDAFNVLKR 694
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 131/335 (39%), Gaps = 47/335 (14%)
Query: 75 GELDVPLDISHYNALL----RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKL 130
++ L + YN LL R + +E T+ L + I PN T +++
Sbjct: 171 NDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDM----IVPNIYTLNTMVN---- 222
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
Y + GNI A + + + +LI G+ + ND+ SA + MM G
Sbjct: 223 --AYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGC 280
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL--VSSDMASA 248
+ +YT ++ G + G +D + ++ C+ T +I+ + + +
Sbjct: 281 RRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDD----CYPTVRTYTVIIHALFGNDRNL 336
Query: 249 EG--ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDII 303
EG + M + EP+ TYT ++ K +D RR+L + G Y +I
Sbjct: 337 EGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALI 396
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK----H 359
G E E+ +M P+ +TY +L+CG++K H
Sbjct: 397 RGYCEEGRIEAALEILG---------------LMESNNCRPNERTYNELICGFSKRKHVH 441
Query: 360 GDMDSIRRLLAQNGS-SLVNGDYLDIIHALAVSGH 393
M + ++L + SLV Y +IH +GH
Sbjct: 442 KAMTLLSKMLESKLTPSLVT--YNSLIHVQCKAGH 474
>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
Length = 410
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 120/318 (37%), Gaps = 82/318 (25%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI-------------------- 125
Y AL+ Y H A++ G+EPN TY LI
Sbjct: 76 YTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMP 135
Query: 126 ---------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
S + LI+ C+ ++ A ++ E MR + S FN LI G+ +A MA
Sbjct: 136 VKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMA 195
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236
+A M AGL PS TY +L+CG+ +
Sbjct: 196 NALHFFNQMKAAGLPPSVVTYNELICGFCR------------------------------ 225
Query: 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN 296
D+A A M + GL P+ TYT L+ +AK +MD +L++ + +
Sbjct: 226 -----VRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLE 280
Query: 297 GD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
D Y ++HAL + G + ++ F M G++P++ Y ++
Sbjct: 281 VDVQSYGVLLHALCMEGKMMHARKL----------FQS-----MDLKGVKPNSVLYDMMI 325
Query: 354 CGYAKHGDMDSIRRLLAQ 371
GY + G RL+ +
Sbjct: 326 YGYGREGSSYKALRLIME 343
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 113/273 (41%), Gaps = 25/273 (9%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+ L+ CQ G++ A ++ + M +E + ALI G+ + M +
Sbjct: 42 TALVHVCCQSGDVAEARRVFDVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRR 101
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
G+EP+ TY L+ + + G+ S + + + + S+ + + S +
Sbjct: 102 DGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKD 161
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS-----SLVNGDYLDI 302
A + M + G+ PS T+ L+ GY K G M + Q + S+V + L
Sbjct: 162 AVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNEL-- 219
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ G D A+ F++ M + GL P+ TYT L+ +AK +M
Sbjct: 220 -----ICGFCRVRDIARAVRAFLD----------MKERGLAPTKVTYTILIAAFAKENEM 264
Query: 363 DSIRRLLAQNGSSLVNGD---YLDIIHALAVSG 392
D +L++ + + D Y ++HAL + G
Sbjct: 265 DRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEG 297
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 39/304 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 119 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 178
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A G+ M GL P+ T+T L+
Sbjct: 179 RLKSAMLASGVQPDVYT-YSVLINGL--CKESKMDGANGLFDEMLVKGLVPNGVTFTTLI 235
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I+ L G + IDE
Sbjct: 236 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE------- 288
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+D+ R+ + Q L + Y
Sbjct: 289 ------------MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 336
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG D + + KG + +++ +
Sbjct: 337 TALISGLCQEGRSVDAEKMLREMLS-VGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQ 395
Query: 439 RSAN 442
R +
Sbjct: 396 RDGH 399
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 192 DVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTF------TTLIDGHCKNGRVD 245
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 246 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 305
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE +L M GL+
Sbjct: 306 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 365
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ + K GD+ +LL +
Sbjct: 366 PDTGTYTMIVNEFCKKGDVWKGSKLLKE 393
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 111/280 (39%), Gaps = 53/280 (18%)
Query: 130 LISKYCQDGNIEGATKIL-----------------------------EFMRDKTFPISEG 160
L+ ++C+DG+I A + E R K+ ++ G
Sbjct: 129 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 188
Query: 161 V------FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
V ++ LI G + + M A G+ M GL P+ T+T L+ G+ K+G +D
Sbjct: 189 VQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 248
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+ QS L ++ + D+ A ++ MS GL+P TYT L+ G
Sbjct: 249 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGC 308
Query: 275 AKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
K GD+D+ R+ + Q L + Y +I L G +D +
Sbjct: 309 CKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS--VDAEKML---------- 356
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M GL+P TYT ++ + K GD+ +LL +
Sbjct: 357 ---REMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKE 393
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 112/289 (38%), Gaps = 59/289 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ + L ++ S+GI P+ V Y + LI +C+ GN+ A +
Sbjct: 226 YNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIY------TTLIDGFCKLGNVSSAYR 279
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M+ + + A+I G Q + A+ + M LEP TYT L+ GY
Sbjct: 280 LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYC 339
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G M +F L N M Q GL P+
Sbjct: 340 KEGKMKE------------------AFSLHN-----------------QMLQMGLTPNIV 364
Query: 266 TYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TYT L G K G++D+ LL + G L Y +++ L +G+ ID+ ++
Sbjct: 365 TYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGN---IDQAVKLM 421
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M AG P A TYT LM Y K +M LL Q
Sbjct: 422 ------------KDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQ 458
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 114/289 (39%), Gaps = 24/289 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y AL+ Y ++ G+ PN VTY + L C+ G ++ A +
Sbjct: 331 YTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTY------TALADGLCKCGEVDTANE 384
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M K ++ +N+L+ G +A ++ A ++ M AG P A TYT LM Y
Sbjct: 385 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYC 444
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K +M + + + +F + +S + E +L M + G+ P+A
Sbjct: 445 KSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNAT 504
Query: 266 TYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TY L+ Y +M + + R + G + +G+ +I+ + GH + + A
Sbjct: 505 TYNSLIKQYCIRNNMRATTEIYRGMCAKG-VVPDGNTYNIL----IKGHCKARNMKEA-- 557
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
W M G + +Y L+ G+ K R L Q
Sbjct: 558 --------WFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQ 598
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 87/220 (39%), Gaps = 24/220 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ L+I YN+L+ + + +E G P+ VTY + L+ YC+
Sbjct: 394 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTY------TTLMDAYCKSR 447
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A ++L M D+ + FN L+ G + + E +L M + G+ P+A TY
Sbjct: 448 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 507
Query: 199 KLMCGYAKHGDMDSIKTKI------PSLKPQSELFLCFSFQLTNLLI---LVSSDMASAE 249
L+ Y +M + T+I + P + N+LI + +M A
Sbjct: 508 SLIKQYCIRNNMRAT-TEIYRGMCAKGVVPDGNTY--------NILIKGHCKARNMKEAW 558
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ M G + +Y L+ G+ K R L Q
Sbjct: 559 FLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQ 598
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+L++ Y + + T+ + ++G+ P+ TY LI +C+ N++ A
Sbjct: 506 YNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKG------HCKARNMKEAWF 559
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+ M K F ++ +NALI G + A + M + GL + Y
Sbjct: 560 LHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIY 611
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 156/367 (42%), Gaps = 54/367 (14%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL++++ +G+ P+ VTY + LIS Y G +E A +++ M K F +N
Sbjct: 257 FLSQVQEKGVYPDIVTY------NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNT 310
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+I G + A+ + M ++GL P + TY L+ K GD+ + ++ +
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 225 EL--FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD- 281
+ +CFS ++ L S ++ A + +AGL P YT L+ GY + G +
Sbjct: 371 VVPDLVCFSSMMS--LFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV 428
Query: 282 --SVRRLLAQSGSSLVNGDYLDIIHALA--------------VSGHGEYIDEVSAIVCFV 325
++R + Q G ++ Y I+H L ++ + D + +
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 326 NIC-FHWLEGPM-----MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG 379
C L+ M M + + TY L+ G+ K GD+D+ + + A S +
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILP 548
Query: 380 ---DYLDIIHALAVSGH----GEYIDEIISK-IQPGV-------------GYSADAANHI 418
Y +++AL GH DE+ISK I+P V G ++D + +
Sbjct: 549 TPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 419 YHLINKG 425
+I++G
Sbjct: 609 EKMISEG 615
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 32/289 (11%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI Y Q + A + +R K F +S NALI + + A G+ +S++G
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD---MA 246
+ + T ++ K G M+ + T + ++ + ++ N LI S M
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTY---NTLISAYSSKGLME 287
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYL--- 300
A ++ M G P TY ++ G KHG + + + A+ SG S + Y
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 301 -------DIIHALAVSGHGEYIDEVSAIVCFVNICFHW-----LEGPMM-----SQAGLE 343
D++ V D V +VCF ++ + L+ +M +AGL
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 344 PSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALA 389
P YT L+ GY + G + ++R + Q G ++ Y I+H L
Sbjct: 408 PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 456
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N++++ Y + + FL K+ S+G P+ ++Y LI + ++ N+ A +
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG------FVREENMSKAFGL 642
Query: 147 LEFMRDKTFPISEGVF--NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
++ M ++ + VF N++++G + N M AE +L M + G+ P TYT ++ G+
Sbjct: 643 VKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
Query: 205 AKHGDM 210
++
Sbjct: 703 VSQDNL 708
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/255 (18%), Positives = 97/255 (38%), Gaps = 43/255 (16%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
+D+ YN +L + ++ + + P+ T + LI +C+ GN+
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTL------TILIDGHCKLGNL 496
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY--- 197
+ A ++ + M++K + +N L+ G + D+ +A+ I M + P+ +Y
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 198 ---------------------------TKLMC-----GYAKHGDMDSIKTKIPSLKPQSE 225
T ++C GY + G+ ++ + + +
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMM--SQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ C S+ + +M+ A G++ M Q GL P TY ++ G+ + M
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 284 RRLLAQSGSSLVNGD 298
+L + VN D
Sbjct: 677 EVVLRKMIERGVNPD 691
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 57/297 (19%), Positives = 107/297 (36%), Gaps = 20/297 (6%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L++ Y + ++ QG + VTY ++ C+ + A K
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG------LCKRKMLGEADK 466
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M ++ LI GH + ++ +A + M + + TY L+ G+
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K GD+D+ K + + L S+ + + +A A + M ++P+
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVM 586
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
++ GY + G+ A G S + +I V Y + V
Sbjct: 587 ICNSMIKGYCRSGN--------ASDGESFLE----KMISEGFVPDCISYNTLIYGFVREE 634
Query: 326 NI--CFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD 380
N+ F ++ Q GL P TY ++ G+ + M +L + VN D
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPD 691
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 133/306 (43%), Gaps = 41/306 (13%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 120 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 179
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 180 RLKSAMLASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLVKGLVPNGVTFTTLI 236
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSG-----HGEYIDEVSAIVC 323
G+ K+G +D + Q S + D Y +I+ L G HG IDE
Sbjct: 237 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHG-LIDE------ 289
Query: 324 FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGD 380
MS GL+P TYT L+ G K GD+D+ R+ + Q L +
Sbjct: 290 -------------MSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVA 336
Query: 381 YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
Y II L G ++++ ++ VG D + I KG + +++ +
Sbjct: 337 YTAIISGLCQEGRPVDAEKMLREMLS-VGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 395
Query: 438 ARSANI 443
R+ ++
Sbjct: 396 QRNGHV 401
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 193 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF------TTLIDGHCKNGRVD 246
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A G++ MS GL+P TYT L+
Sbjct: 247 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLI 306
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE +L M GL+
Sbjct: 307 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLK 366
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ + K GD+ +LL +
Sbjct: 367 PDTGTYTMIINEFCKKGDVWKGSKLLKE 394
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 111/280 (39%), Gaps = 53/280 (18%)
Query: 130 LISKYCQDGNIEGATKIL-----------------------------EFMRDKTFPISEG 160
L+ ++C+DG+I A + E R K+ ++ G
Sbjct: 130 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 189
Query: 161 V------FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
V ++ LI G + + M A + M GL P+ T+T L+ G+ K+G +D
Sbjct: 190 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 249
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+ QS L ++ + D+ A G++ MS GL+P TYT L+ G
Sbjct: 250 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGC 309
Query: 275 AKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
K GD+D+ R+ + Q L + Y II L G +D +
Sbjct: 310 CKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRP--VDAEKML---------- 357
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M GL+P TYT ++ + K GD+ +LL +
Sbjct: 358 ---REMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 394
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 39/304 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A G+ M GL P+ T+T L+
Sbjct: 198 RLKSAMLASGVQPDVYT-YSVLINGL--CKESKMDGANGLFDEMLVKGLVPNGVTFTTLI 254
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I+ L G + IDE
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE------- 307
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+D+ R+ + Q L + Y
Sbjct: 308 ------------MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 355
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG D + + KG + +++ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLS-VGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQ 414
Query: 439 RSAN 442
R +
Sbjct: 415 RDGH 418
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 211 DVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTF------TTLIDGHCKNGRVD 264
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 324
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE +L M GL+
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ + K GD+ +LL +
Sbjct: 385 PDTGTYTMIVNEFCKKGDVWKGSKLLKE 412
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 111/280 (39%), Gaps = 53/280 (18%)
Query: 130 LISKYCQDGNIEGATKIL-----------------------------EFMRDKTFPISEG 160
L+ ++C+DG+I A + E R K+ ++ G
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207
Query: 161 V------FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
V ++ LI G + + M A G+ M GL P+ T+T L+ G+ K+G +D
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 267
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+ QS L ++ + D+ A ++ MS GL+P TYT L+ G
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGC 327
Query: 275 AKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
K GD+D+ R+ + Q L + Y +I L G +D +
Sbjct: 328 CKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS--VDAEKML---------- 375
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M GL+P TYT ++ + K GD+ +LL +
Sbjct: 376 ---REMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKE 412
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 151/383 (39%), Gaps = 45/383 (11%)
Query: 63 NLPCEDPFSVHTG--ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVT 120
+LP F++ L +PL + +N +LR T P L +L Q PN VT
Sbjct: 94 SLPSAPAFALFADIYRLRLPLCTTTFNIMLRHLC---ATGKPVRAL-ELLRQMPRPNAVT 149
Query: 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDKT-FPISEGVFNALIYGHSQANDMASAE 179
Y +I+ +C G ++ A +++ MR++ + + LI G + M A
Sbjct: 150 YNTVIAG------FCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAA 203
Query: 180 GIL-TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL 238
+ M++Q + PSA Y L+ GY G +D + + ++ L
Sbjct: 204 KVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHA 263
Query: 239 ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLV 295
+ + + A +L M + GL P TY L+ GY K G+ + +++ G
Sbjct: 264 LFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRAT 323
Query: 296 NGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCG 355
Y +I+A + G + D + + + G+ P Y L+
Sbjct: 324 AVTYTSLIYAFSRKGQVQETDRLFKVAV---------------KKGIRPDVVMYNALINS 368
Query: 356 YAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGE----YIDEIISK-IQPG 407
+ GDM+ ++A+ + D Y +I + G + IDE+ + IQP
Sbjct: 369 HCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD 428
Query: 408 VGYSA-----DAANHIYHLINKG 425
+G DA N + ++ KG
Sbjct: 429 LGLCKNGQGDDAENLMKEMVGKG 451
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 99/236 (41%), Gaps = 27/236 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V + ++ YN L+ + L +++ G+ P+ TY LI+ YC++G
Sbjct: 250 VAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILING------YCKEG 303
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N + A ++ E M K + + +LIY S+ + + + + + G+ P Y
Sbjct: 304 NEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYN 363
Query: 199 KLMCGYAKHGDMDSI--------KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
L+ + GDM+ K +IP P + ++ + +L D A G
Sbjct: 364 ALINSHCAGGDMERAFEIMAEMEKKRIP---PDD---VTYNTLIRGFCLLGRLD--EARG 415
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
++ M++ G++P +C + D +++ + + G + + Y+ +I L
Sbjct: 416 LIDEMTKRGIQPDLG-----LCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGL 466
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 121/342 (35%), Gaps = 89/342 (26%)
Query: 110 ESQGIEPNRVTYQQLISN------------------------------SKLISKYCQDGN 139
E GI P++ TY LIS + LI YC G
Sbjct: 175 ERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGK 234
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
++ A + E M + ++ +N L++ + A +L M + GL P TY
Sbjct: 235 LDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNI 294
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L+ GY K G+ K E+F MS+ G
Sbjct: 295 LINGYCKEGNE----------KKALEVF-------------------------EEMSRKG 319
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYID 316
+ +A TYT L+ +++ G + RL + + D Y +I++ G E
Sbjct: 320 VRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAF 379
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
E+ A M + + P TY L+ G+ G +D R L+ +
Sbjct: 380 EIMA---------------EMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRG 424
Query: 377 VNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHI 418
+ D L +G G+ + ++ ++ G G + D + +I
Sbjct: 425 IQPDL-----GLCKNGQGDDAENLMKEMV-GKGITPDDSTYI 460
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 161/378 (42%), Gaps = 43/378 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ +H + ++E++GI PN VTY S LIS C G A++
Sbjct: 54 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY------SSLISCLCNYGRWSDASR 107
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M ++ F+ALI + + AE + M + ++PS TY+ L+ G+
Sbjct: 108 LLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFC 167
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NLLILVSSDMASAE---GILTMMSQAGLE 261
H +D K + + CF +T N LI E + MSQ GL
Sbjct: 168 MHDRLDEAKQMFEFMVSKH----CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 223
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH------- 311
+ TY L+ G + GD D + + + S V + Y ++ L +G
Sbjct: 224 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 283
Query: 312 GEYI--DEVSAIVCFVNICFH-----------WLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
EY+ ++ + NI W +S G++P Y ++ G+ +
Sbjct: 284 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 343
Query: 359 HG---DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA 415
G + D++ + + ++G+ +G Y +I A G E E+I +++ G++ DA+
Sbjct: 344 KGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS-CGFAGDAS 402
Query: 416 N--HIYHLINKGQIDAAY 431
+ ++++ G++D ++
Sbjct: 403 TIGLVTNMLHDGRLDKSF 420
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 109/270 (40%), Gaps = 24/270 (8%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
+ ++ ++G +P+ VTY +++ C+ G+ + A +L M ++N
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNG------LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 56
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSIKTKIPSLK 221
+I G + M A + M G+ P+ TY+ L +C Y + D + + + K
Sbjct: 57 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 116
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
++ F+F + + AE + M + ++PS TY+ L+ G+ H +D
Sbjct: 117 INPDV---FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 173
Query: 282 SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
+++ S D + + + G +Y + F MSQ G
Sbjct: 174 EAKQMFEFMVSKHCFPDV--VTYNTLIKGFCKYKRVEEGMEVFRE----------MSQRG 221
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
L + TY L+ G + GD D + + +
Sbjct: 222 LVGNTVTYNILIQGLFQAGDCDMAQEIFKE 251
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 91/222 (40%), Gaps = 16/222 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L++ + + + ++ +G+ N VTY LI Q G+ +
Sbjct: 190 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG------LFQAGDCD 243
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M P + +N L+ G + + A + + ++ +EP+ TY ++
Sbjct: 244 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 303
Query: 202 CGYAKHGDMDS-----IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
G K G ++ + +KP + ++ ++ S + A A + M
Sbjct: 304 EGMCKAGKVEDGWDLFCNLSLKGVKPD---VVAYNTMISGFCRKGSKEEADA--LFKEMK 358
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD 298
+ G P++ Y L+ + GD ++ L+ + S GD
Sbjct: 359 EDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 400
>gi|449487793|ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 148/362 (40%), Gaps = 44/362 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI--EGA 143
Y AL+ Y N + + L +++ + + PN +TY +I+ C G++ EG
Sbjct: 186 YTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINA-------CARGDLDWEGL 238
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+ MR + +N L+ + AE + M + G+ P TY+ ++
Sbjct: 239 LGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVET 298
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS---AEGILTMMSQAGL 260
+ K G ++ + + ++ + L S+ N+LI + + S A + M AG
Sbjct: 299 FGKLGKLEKVAMLLKEMESEGYLPDISSY---NVLIEAHAKLGSIKEAMDVFKQMQAAGC 355
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
P+A TY+ L+ Y KHG D VR L Q S D + V G G Y EV
Sbjct: 356 VPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVT 415
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ-NGSSLV-- 377
+ FH L ++P+ +TY L+ K G + +++L NG +V
Sbjct: 416 L-------FHDL-----VDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPS 463
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTL 437
+ Y +I A G DE + A N + + +K ID +++T
Sbjct: 464 SKAYSGLIEAY---GQAALYDEALV-----------AFNTMNEVGSKSTIDTYNSLIHTF 509
Query: 438 AR 439
AR
Sbjct: 510 AR 511
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 128/347 (36%), Gaps = 79/347 (22%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
++ ++ SQG+ + + S + LI+ Y ++G E + ++LE M+ + + +
Sbjct: 168 SEIFDEMASQGV------IRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTY 221
Query: 163 NALIYGHSQAN-DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
N +I ++ + D G+ M G++P TY L+ A G D
Sbjct: 222 NTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDE--------- 272
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
AE + M + G+ P TY+ ++ + K G ++
Sbjct: 273 --------------------------AEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLE 306
Query: 282 SVRRLLAQSGSSLVNGDYLDII--HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
V LL + S YL I + + + H + A+ F M
Sbjct: 307 KVAMLLKEMESE----GYLPDISSYNVLIEAHAKLGSIKEAMDVF----------KQMQA 352
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDE 399
AG P+A TY+ L+ Y KHG D +R L Q S D + V G G Y E
Sbjct: 353 AGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKE 412
Query: 400 IIS--------KIQPGV-------------GYSADAANHIYHLINKG 425
+++ I P + G DA ++H+ KG
Sbjct: 413 VVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKG 459
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 140/347 (40%), Gaps = 59/347 (17%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------- 127
NA R LD E A++ +G++P+ VTY L+S
Sbjct: 226 NACARGDLDWEGLLG---LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIE 282
Query: 128 ----------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS 177
S ++ + + G +E +L+ M + + +N LI H++ +
Sbjct: 283 GGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKE 342
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
A + M AG P+A TY+ L+ Y KHG D ++ +K S ++ N+
Sbjct: 343 AMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTY---NI 399
Query: 238 LILVSSDMASAEGILTM---MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSS 293
LI V + + ++T+ + ++P+ +TY L+ K G + +++L +G
Sbjct: 400 LIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKG 459
Query: 294 LV--NGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
+V + Y +I A G DE A+V F M++ G + + TY
Sbjct: 460 IVPSSKAYSGLIEAY---GQAALYDE--ALVAF----------NTMNEVGSKSTIDTYNS 504
Query: 352 LMCGYAKHG---DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGE 395
L+ +A+ G + ++I + + G S + II SG E
Sbjct: 505 LIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYE 551
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 111/292 (38%), Gaps = 57/292 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI- 140
D + YN L+RV+ + + L + I+PN TY+ L+ C G +
Sbjct: 393 DATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFA-------CGKGGLH 445
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A KIL M K S ++ LI + QA A M++ G + + TY L
Sbjct: 446 EDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSL 505
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ +A+ G L+ F E IL+ M + G+
Sbjct: 506 IHTFARGG-----------------LYKEF------------------EAILSRMREYGI 530
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
+A++++ ++ GY + G + + + + + + ++ V
Sbjct: 531 SRNAKSFSGIIEGYRQSGQYEEAIKAFVE-------------MEKMRCELDEQTLEGVLG 577
Query: 321 IVCFVNICFHWLEGPM-MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ CF + E + + +G+ PS Y ++ YAK+G D LL +
Sbjct: 578 VYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDE 629
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 133/316 (42%), Gaps = 33/316 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y ++ + + + K++ G+ PN TY LI+ +YC+DG + A K
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLIT------EYCRDGKLSLAFK 233
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + + + + +N LI G + ++ AEG+L M +A + P+ +T+ LM G
Sbjct: 234 VFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLC 293
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MSQAGLEP 262
G +D + + LK + LC + N+LI S + ++ + + M G+ P
Sbjct: 294 NTGQLDKALSYLEKLKL---IGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISP 350
Query: 263 SAQTYTKLMCGYAKHGDMDSVRR---LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
S TYT LM + + D++ L+ + G Y +IH L + G+ + E S
Sbjct: 351 SKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGN---MVEAS 407
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL---AQNGSSL 376
+ M + L+P+ Y ++ GY K + + L +NG +
Sbjct: 408 KLY------------KSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTP 455
Query: 377 VNGDYLDIIHALAVSG 392
Y+ I L G
Sbjct: 456 NVASYISTIQILCKDG 471
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 133/324 (41%), Gaps = 37/324 (11%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ + ++ + +N + + LA++E+ G+ PN Y + LI C++G+I
Sbjct: 105 FDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIY------TILIEACCRNGDI 158
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A + M D ++ ++ +I G + + M G+ P+ TY L
Sbjct: 159 DQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSL 218
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQ 257
+ Y + G + S+ K+ S+ + + N+LI ++ AEG+L M +
Sbjct: 219 ITEYCRDGKL-SLAFKV--FDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKR 275
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG-----SSLVNGDYLDIIHALAVSGHG 312
A + P+ +T+ LM G G +D L + +LV Y +I + G+
Sbjct: 276 AHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVT--YNILISGFSKVGNS 333
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLL 369
+ E+ M G+ PS TYT LM + + D++ + L+
Sbjct: 334 SVVSELVR---------------EMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLM 378
Query: 370 AQNGSSLVNGDYLDIIHALAVSGH 393
+ G Y +IH L + G+
Sbjct: 379 KRIGLVPDQHTYGVLIHGLCIKGN 402
>gi|449469490|ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 148/362 (40%), Gaps = 44/362 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI--EGA 143
Y AL+ Y N + + L +++ + + PN +TY +I+ C G++ EG
Sbjct: 186 YTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINA-------CARGDLDWEGL 238
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+ MR + +N L+ + AE + M + G+ P TY+ ++
Sbjct: 239 LGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEITTYSYIVET 298
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS---AEGILTMMSQAGL 260
+ K G ++ + + ++ + L S+ N+LI + + S A + M AG
Sbjct: 299 FGKLGKLEKVAMLLKEMESEGYLPDISSY---NVLIEAHAKLGSIKEAMDVFKQMQAAGC 355
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
P+A TY+ L+ Y KHG D VR L Q S D + V G G Y EV
Sbjct: 356 VPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKEVVT 415
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ-NGSSLV-- 377
+ FH L ++P+ +TY L+ K G + +++L NG +V
Sbjct: 416 L-------FHDL-----VDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKGIVPS 463
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTL 437
+ Y +I A G DE + A N + + +K ID +++T
Sbjct: 464 SKAYSGLIEAY---GQAALYDEALV-----------AFNTMNEVGSKSTIDTYNSLIHTF 509
Query: 438 AR 439
AR
Sbjct: 510 AR 511
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 128/347 (36%), Gaps = 79/347 (22%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
++ ++ SQG+ + + S + LI+ Y ++G E + ++LE M+ + + +
Sbjct: 168 SEIFDEMASQGV------IRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTY 221
Query: 163 NALIYGHSQAN-DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
N +I ++ + D G+ M G++P TY L+ A G D
Sbjct: 222 NTVINACARGDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDE--------- 272
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
AE + M + G+ P TY+ ++ + K G ++
Sbjct: 273 --------------------------AEMVFKTMIEGGIVPEITTYSYIVETFGKLGKLE 306
Query: 282 SVRRLLAQSGSSLVNGDYLDII--HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
V LL + S YL I + + + H + A+ F M
Sbjct: 307 KVAMLLKEMESE----GYLPDISSYNVLIEAHAKLGSIKEAMDVF----------KQMQA 352
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDE 399
AG P+A TY+ L+ Y KHG D +R L Q S D + V G G Y E
Sbjct: 353 AGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGYFKE 412
Query: 400 IIS--------KIQPGV-------------GYSADAANHIYHLINKG 425
+++ I P + G DA ++H+ KG
Sbjct: 413 VVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKG 459
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 140/347 (40%), Gaps = 59/347 (17%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------- 127
NA R LD E A++ +G++P+ VTY L+S
Sbjct: 226 NACARGDLDWEGLLG---LFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIE 282
Query: 128 ----------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS 177
S ++ + + G +E +L+ M + + +N LI H++ +
Sbjct: 283 GGIVPEITTYSYIVETFGKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKE 342
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
A + M AG P+A TY+ L+ Y KHG D ++ +K S ++ N+
Sbjct: 343 AMDVFKQMQAAGCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTY---NI 399
Query: 238 LILVSSDMASAEGILTM---MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSS 293
LI V + + ++T+ + ++P+ +TY L+ K G + +++L +G
Sbjct: 400 LIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILFHMNGKG 459
Query: 294 LV--NGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
+V + Y +I A G DE A+V F M++ G + + TY
Sbjct: 460 IVPSSKAYSGLIEAY---GQAALYDE--ALVAF----------NTMNEVGSKSTIDTYNS 504
Query: 352 LMCGYAKHG---DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGE 395
L+ +A+ G + ++I + + G S + II SG E
Sbjct: 505 LIHTFARGGLYKEFEAILSRMREYGISRNAKSFSGIIEGYRQSGQYE 551
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 111/292 (38%), Gaps = 57/292 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI- 140
D + YN L+RV+ + + L + I+PN TY+ L+ C G +
Sbjct: 393 DATTYNILIRVFGEGGYFKEVVTLFHDLVDENIDPNMETYEGLVFA-------CGKGGLH 445
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A KIL M K S ++ LI + QA A M++ G + + TY L
Sbjct: 446 EDAKKILFHMNGKGIVPSSKAYSGLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTYNSL 505
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ +A+ G L+ F E IL+ M + G+
Sbjct: 506 IHTFARGG-----------------LYKEF------------------EAILSRMREYGI 530
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
+A++++ ++ GY + G + + + + + + ++ V
Sbjct: 531 SRNAKSFSGIIEGYRQSGQYEEAIKAFVE-------------MEKMRCELDEQTLEGVLG 577
Query: 321 IVCFVNICFHWLEGPM-MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ CF + E + + +G+ PS Y ++ YAK+G D LL +
Sbjct: 578 VYCFAGLVDESKEQFIEIKASGILPSVLCYCMMLAVYAKNGRWDDASELLDE 629
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 198 RLKSAMLASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLVKGLVPNGVTFTTLI 254
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G IDE
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE------- 307
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+DS R+ + Q L Y
Sbjct: 308 ------------MSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAY 355
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG DA + I KG + +++ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLS-VGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 439 RSANI 443
R ++
Sbjct: 415 RDGHV 419
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 211 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF------TTLIDGHCKNGRVD 264
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 324
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+DS + ++ ++ + AE +L M GL+
Sbjct: 325 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P A+TYT ++ + K GD+ +LL +
Sbjct: 385 PDARTYTMIINEFCKKGDVWKGSKLLKE 412
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 131/331 (39%), Gaps = 33/331 (9%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L + + +N ++ V DF+ +E+ G++PN VTY ++ YC
Sbjct: 215 LRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHG------YCS 268
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G +E A IL M+ + + +LI G + + A I M Q GL PSA
Sbjct: 269 SGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVI 328
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSL--KPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
Y L+ G+ G++D + K S ++ + L + +D AE ++
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTD--EAECMIKE 386
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGH 311
+ + G+ P A TY L+ GY + + L + SG Y ++H L+
Sbjct: 387 IQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNR 446
Query: 312 GEYIDEV-----SAIVCFVNICFHWL----------EGPM-----MSQAGLEPSAQTYTK 351
+ D++ S V I F+ L +G M + + P T+
Sbjct: 447 MKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNT 506
Query: 352 LMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL 382
+M G+ + G ++ R L + + D++
Sbjct: 507 IMQGHCREGKVEEARELFDEMKRRGIKPDHI 537
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 10/193 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +LL V D K+ S+G+ P+ + + LI +C + N++GA +
Sbjct: 434 YTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDG------HCSNSNVKGAFE 487
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M P E FN ++ GH + + A + M + G++P ++ L+ GY+
Sbjct: 488 LLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYS 547
Query: 206 KHGDM-DSIKTKIPSLKPQ-SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
+ GD+ D+ + + L + L ++ + L D+ AE +L M G+ P
Sbjct: 548 RRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDL--AEELLKEMVSKGMTPD 605
Query: 264 AQTYTKLMCGYAK 276
TY L+ G AK
Sbjct: 606 DTTYFTLIEGIAK 618
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 128/328 (39%), Gaps = 62/328 (18%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I N+LL ++L T + A++ I+ + T+ + +I+ C++G ++
Sbjct: 186 IETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTF------NIMINVLCKEGKLKK 239
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + M + +N +++G+ + + +A+ ILT M + +EP + TY L+
Sbjct: 240 AKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLIS 299
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
G K G ++ A I M Q GL P
Sbjct: 300 GMCKQGRLE-----------------------------------EASKIFEEMVQKGLRP 324
Query: 263 SAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
SA Y L+ G+ G++D + + + + G S Y +IHAL + + DE
Sbjct: 325 SAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFME---QRTDEAE 381
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSL 376
++ + + G+ P A TY L+ GY + + L + +G
Sbjct: 382 CMI------------KEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKP 429
Query: 377 VNGDYLDIIHALAVSGHGEYIDEIISKI 404
Y ++H L+ + D++ KI
Sbjct: 430 TKKTYTSLLHVLSKKNRMKEADDLFKKI 457
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 119/289 (41%), Gaps = 44/289 (15%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+S YN+L+ + T + +++ +GI P+ +TY LI+ YC+ N +
Sbjct: 361 MSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILING------YCRCANAKK 414
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + + M ++ + +L++ S+ N M A+ + ++ G+ P A + L+
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALID 474
Query: 203 GYAKHG----------DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
G+ + DMD +K P E+ +F + A +
Sbjct: 475 GHCSNSNVKGAFELLKDMDRMKV------PPDEV----TFNTIMQGHCREGKVEEARELF 524
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVS 309
M + G++P ++ L+ GY++ GD+ VR + +G + Y ++ L +
Sbjct: 525 DEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKN 584
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
G+ +E L M+S+ G+ P TY L+ G AK
Sbjct: 585 QEGDLAEE--------------LLKEMVSK-GMTPDDTTYFTLIEGIAK 618
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 134/305 (43%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S + A + M GL P++ T+T L+
Sbjct: 198 RLKSAMLASGVQPDVYT-YSVLINGL--CKESKIDDANELFDEMLVKGLVPNSVTFTTLI 254
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G IDE
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE------- 307
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+D+ R+ + Q + L + Y
Sbjct: 308 ------------MSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVY 355
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG DA + I KG + +++ +
Sbjct: 356 TALISGLCREGQSVDAEKMLREMLS-VGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 439 RSANI 443
R ++
Sbjct: 415 RDGHV 419
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 101/210 (48%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 211 DVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTF------TTLIDGHCKNGRVD 264
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 324
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+D+ + + ++ + L + ++ ++ L AE +L M G
Sbjct: 325 DGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGL--CREGQSVDAEKMLREMLSVG 382
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P A+TYT ++ + K GD+ +LL +
Sbjct: 383 LKPDARTYTMIINEFCKKGDVWKGSKLLKE 412
>gi|15240649|ref|NP_199839.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170477|sp|Q9FGR7.1|PP426_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g50280, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1006; Flags: Precursor
gi|9759030|dbj|BAB09399.1| unnamed protein product [Arabidopsis thaliana]
gi|332008538|gb|AED95921.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 723
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 56/237 (23%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ +C +G E A I M K + V+N L+ ++++N + EG+ T M G
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKG 409
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
L+PSA TY LM YA+ D ++T
Sbjct: 410 LKPSAATYNILMDAYARRMQPDIVET---------------------------------- 435
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-----DSVRRLLAQSGSSLVNGDYLDIIH 304
+L M GLEP+ ++YT L+ Y + M D+ R + + G + Y +IH
Sbjct: 436 -LLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLR-MKKVGLKPSSHSYTALIH 493
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
A +VSG E A F +C + G++PS +TYT ++ + + GD
Sbjct: 494 AYSVSGWHE-----KAYASFEEMC----------KEGIKPSVETYTSVLDAFRRSGD 535
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 123/296 (41%), Gaps = 44/296 (14%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++E +GI N + Y + L+ Y + +IE + MRDK S +N L+
Sbjct: 369 EMEKKGIRSNTIVY------NTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMD 422
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS------IKTKIPSLK 221
+++ E +L M GLEP+ ++YT L+ Y + M ++ K LK
Sbjct: 423 AYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLK 482
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD-- 279
P S + + VS A M + G++PS +TYT ++ + + GD
Sbjct: 483 PSSHSYTALIHAYS-----VSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTG 537
Query: 280 --MDSVRRLLAQS--GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
M+ + +L + G+ + LD + G YI+ + F
Sbjct: 538 KLMEIWKLMLREKIKGTRITYNTLLD-----GFAKQGLYIEARDVVSEF----------- 581
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHAL 388
S+ GL+PS TY LM YA+ G + +LL + + + D Y +I+A
Sbjct: 582 --SKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 110/280 (39%), Gaps = 43/280 (15%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS---NSKLISKYCQDGNIEG 142
YN L+ Y L ++E G+EPN +Y LIS +K +S D
Sbjct: 417 YNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADA---- 472
Query: 143 ATKILEFMRDKTFPI--SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
F+R K + S + ALI+ +S + A M + G++PS +TYT +
Sbjct: 473 ------FLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSV 526
Query: 201 MCGYAKHGDMDSI--------KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ + + GD + + KI + L F L I A ++
Sbjct: 527 LDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLD-GFAKQGLYI-------EARDVV 578
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
+ S+ GL+PS TY LM YA+ G + +LL + + + D +
Sbjct: 579 SEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSIT----------- 627
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
Y + A V + + MM ++G P ++Y KL
Sbjct: 628 -YSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 167/413 (40%), Gaps = 68/413 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y L+R D + L ++ GIEPN V Y S L+ YC+ G E
Sbjct: 147 DVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVY------SCLLQGYCKAGRWE 200
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+K+ E M + ++ LI + + A ++ M + GLEP+ TY L+
Sbjct: 201 CVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLI 260
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS---DMASAEGILTMM--S 256
K G S+K + E + N LI S +M A G+L M
Sbjct: 261 NSMCKEG---SVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHG 317
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSS--LVNGDYL--DIIHALAVS 309
+ +EP+ T+ ++ G K G M VR ++A++G + LV + L ++ V
Sbjct: 318 ETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVK 377
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
E +DE M+ +GLEP + TY+ L+ G+ K +D LL
Sbjct: 378 KAMELMDE-------------------MASSGLEPDSFTYSILINGFCKMWQVDRAESLL 418
Query: 370 AQNGSSLVNGD---YLDIIHALAVSGHGE----YIDEIISKIQPG-VGYSA--------- 412
++ + + Y+ ++ AL G E + DE+ + V YS
Sbjct: 419 SKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLR 478
Query: 413 ---DAANHIYHLINKGQIDAAYR---IVNTLARSANING-----EQLPVGGFL 454
A + H++++G I + ++N A S ++ +Q+ GF+
Sbjct: 479 DRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFV 531
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 132/336 (39%), Gaps = 63/336 (18%)
Query: 76 ELDVPLDISHYNAL---LRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
E V LD YN L L L+ + + + E+ +EPN VT+ +I
Sbjct: 281 EKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETM-VEPNVVTFNSVIHG----- 334
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
C+ G + A ++ + M + + FN LI G + + + A ++ M+ +GLEP
Sbjct: 335 -LCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEP 393
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ TY+ L+ G+ K +D AE +L
Sbjct: 394 DSFTYSILINGFCKMWQVD-----------------------------------RAESLL 418
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAVSGH 311
+ M + G+EP Y L+ + G M+ R + + LD++ ++ + G
Sbjct: 419 SKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNC----KLDVVAYSTMIHGA 474
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
D SA H L+ GL P + TY+ L+ +A GD+ + R+L Q
Sbjct: 475 CRLRDRKSA----EEFLKHMLD------EGLIPDSVTYSMLINMFANSGDLGAAERVLKQ 524
Query: 372 NGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI 404
+S D + +I G E + E+I ++
Sbjct: 525 MTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREM 560
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 147/376 (39%), Gaps = 47/376 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN +L FL ++ + P V+Y + L+ C +
Sbjct: 77 DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSY------TTLMRALCAERRTG 130
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L M+ + LI G A D+ A +L M ++G+EP+ Y+ L+
Sbjct: 131 QAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLL 190
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
GY K G + + + +P ++ L + A ++ M
Sbjct: 191 QGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCR-----EGKVKKATQVMDKMM 245
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
+ GLEP+ TY L+ K G + S+R + + G +L Y +I L SG E
Sbjct: 246 ERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGL--SGVLE 303
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLA 370
+DE + LE + + +EP+ T+ ++ G K G M +R ++A
Sbjct: 304 -MDEAMGL----------LEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMA 352
Query: 371 QNGSS--LVNGDYL--DIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLIN 423
+NG + LV + L ++ V E +DE+ S G D+ + I
Sbjct: 353 ENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASS-----GLEPDSFTYSILINGFCK 407
Query: 424 KGQIDAAYRIVNTLAR 439
Q+D A +++ + R
Sbjct: 408 MWQVDRAESLLSKMRR 423
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 121/297 (40%), Gaps = 32/297 (10%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L ++ + G+EP+ + L+ C+ G+++ A K+ E MR + FP++ F
Sbjct: 205 EVLDEMPTFGLEPDEYVF------GCLLDALCKHGSVKDAAKLFEDMRLR-FPVNLRYFT 257
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
+L+YG + M A+ +L M +AG EP YT L+ GYA G M + ++ +
Sbjct: 258 SLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRR 317
Query: 224 SELFLCFSFQLTNLLILVSS-----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
F T +L+ + M A + M + E TYT L+ G+ K G
Sbjct: 318 G-----FEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWG 372
Query: 279 DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
+D +L + L +H +A E + E C +E M
Sbjct: 373 KIDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIE----------CLELMEK--MK 420
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGSSLVNGDYLDIIHALAVSG 392
Q P Y ++ K G++ RL + NG S ++ II+ L G
Sbjct: 421 QIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQG 477
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 131/332 (39%), Gaps = 50/332 (15%)
Query: 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISE-GVFNALIYGHSQANDMASAEGILTM 184
S K++SK Q G + G ++E MR + + E +F L+ + A+ + A +L
Sbjct: 153 SMVKILSKMRQFGAVWG---LIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDE 209
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF----LCFSFQLTNLLIL 240
M GLEP + L+ KHG S+K ++LF L F L L
Sbjct: 210 MPTFGLEPDEYVFGCLLDALCKHG----------SVKDAAKLFEDMRLRFPVNLRYFTSL 259
Query: 241 V-----SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSGS 292
+ M A+ +L M +AG EP YT L+ GYA G M LL + G
Sbjct: 260 LYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGF 319
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
Y +I AL E A+ FV M + E TYT L
Sbjct: 320 EPNATCYTVLIQALCKVDRME-----EAMKVFVE----------MERYECEADVVTYTAL 364
Query: 353 MCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ--PGVGY 410
+ G+ K G +D +L + L +H +A E + E + ++ + Y
Sbjct: 365 VSGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEY 424
Query: 411 SADAANHIYHLINK-----GQIDAAYRIVNTL 437
D IY+++ + G++ A R+ N +
Sbjct: 425 HPDIG--IYNVVIRLACKLGEVKEAVRLWNEM 454
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 85/236 (36%), Gaps = 17/236 (7%)
Query: 46 FVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDF 105
F L WC E + V E DI Y LL Y + D
Sbjct: 256 FTSLLYGWCREEKMMEAKY-----VLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDL 310
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L + +G EPN Y + LI C+ +E A K+ M + AL
Sbjct: 311 LKDMRRRGFEPNATCY------TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTAL 364
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
+ G + + +L M + GL PS TY +M A H + + + ++ +
Sbjct: 365 VSGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYMHIM---AAHEKKEKLIECLELMEKMKQ 421
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTM---MSQAGLEPSAQTYTKLMCGYAKHG 278
+ + N++I ++ + + + + M GL P A T+ ++ G G
Sbjct: 422 IEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQG 477
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 131/313 (41%), Gaps = 46/313 (14%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G++PN TY ++ S + G+ E A ++ M +K + + N +I
Sbjct: 362 KGMQPNAYTYNTMLHGS------LKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCS 415
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFL 228
A + MS+ G++ A TY L+ G+ K G +D ++ ++ + PQ
Sbjct: 416 RGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQP---- 471
Query: 229 CFSFQLTNLLILVS---SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
S L LLI+ S D +A+ +L MS GL P+A TY ++ G K GD + VR
Sbjct: 472 --SVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRE 529
Query: 286 LLAQS---GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
L ++ G II L G DE S + MS+ G+
Sbjct: 530 LYNETCNKGYGTTTATCNKIISELCSRGKS---DEASEMF------------KKMSETGI 574
Query: 343 EPSAQTYTKLMCGYAKHG----DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGE--- 395
+ A TY L+ G+ K G M+ + L+AQ G Y +I L +G E
Sbjct: 575 KADAITYNSLIRGFCKEGKVGKSMNLLNELVAQ-GLQPSASSYASLIIQLCQNGDAESAK 633
Query: 396 --YIDEIISKIQP 406
+ D + I+P
Sbjct: 634 RLWGDMVSKGIEP 646
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 152/365 (41%), Gaps = 39/365 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + ++ S ++ L + ++ P TYQ++I+ C++ A +
Sbjct: 266 YNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIING------LCKNEECLEAYR 319
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ ++D+ + ++ +I+G + A + M G++P+A TY ++ G
Sbjct: 320 VFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSL 379
Query: 206 KHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
K GD + + ++ + + C ++ L SD A + MS+ G++
Sbjct: 380 KSGDFERACELYNEMCNKGYGTTTVTCNKI-ISELCSRGKSDEAFE--VFKKMSETGIQA 436
Query: 263 SAQTYTKLMCGYAKHGDMDS----VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
A TY L+ G+ K G +D + L+AQ V+ L II + G++ E
Sbjct: 437 DAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCK---DGDF--EA 491
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGSS 375
+ L G M S+ GL P+A TY ++ G K GD + +R L + G
Sbjct: 492 A----------KRLLGDMSSK-GLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYG 540
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYR 432
II L G + E+ K+ G ADA + I +G++ +
Sbjct: 541 TTTATCNKIISELCSRGKSDEASEMFKKMSE-TGIKADAITYNSLIRGFCKEGKVGKSMN 599
Query: 433 IVNTL 437
++N L
Sbjct: 600 LLNEL 604
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 86/214 (40%), Gaps = 12/214 (5%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + D YN+L+R + + L +L +Q +P+ Y+ LI S C
Sbjct: 431 ETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKS------C 484
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+DG+ E A ++L M K + ++ +++G ++ D + G +
Sbjct: 485 KDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTA 544
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGIL 252
T K++ G D K SE + N LI + + +L
Sbjct: 545 TCNKIISELCSRGKSDEAS---EMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLL 601
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+ GL+PSA +Y L+ ++GD +S +RL
Sbjct: 602 NELVAQGLQPSASSYASLIIQLCQNGDAESAKRL 635
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 53/280 (18%), Positives = 96/280 (34%), Gaps = 54/280 (19%)
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
LI + +A +L + GL+P TY KL+ G+ + + S+ + ++ +
Sbjct: 233 CLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIAR 292
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ L +++Q + + + A + + G P YT ++ G + G
Sbjct: 293 NHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEA 352
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
R+L W E M G++
Sbjct: 353 RKL--------------------------------------------WFE---MMDKGMQ 365
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEI 400
P+A TY ++ G K GD + L + G II L G + E+
Sbjct: 366 PNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEV 425
Query: 401 ISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
K+ G ADA + I +G++D ++N L
Sbjct: 426 FKKMSE-TGIQADAITYNSLIRGFCKEGKVDERMNLLNEL 464
>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 133/316 (42%), Gaps = 33/316 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y ++ + + + K++ G+ PN TY LI+ +YC+DG + A K
Sbjct: 180 YTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLIT------EYCRDGKLSLAFK 233
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + + + + +N LI G + ++ AEG+L M +A + P+ +T+ LM G
Sbjct: 234 VFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLC 293
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MSQAGLEP 262
G +D + + LK + LC + N+LI S + ++ + + M G+ P
Sbjct: 294 NTGQLDKALSYLEKLKL---IGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISP 350
Query: 263 SAQTYTKLMCGYAKHGDMDSVRR---LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
S TYT LM + + D++ L+ + G Y +IH L + G+ + E S
Sbjct: 351 SKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGN---MVEAS 407
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL---AQNGSSL 376
+ M + L+P+ Y ++ GY K + + L +NG +
Sbjct: 408 KLY------------KSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTP 455
Query: 377 VNGDYLDIIHALAVSG 392
Y+ I L G
Sbjct: 456 NVASYISTIQILCKDG 471
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 133/324 (41%), Gaps = 37/324 (11%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ + ++ + +N + + LA++E+ G+ PN Y + LI C++G+I
Sbjct: 105 FDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIY------TILIEACCRNGDI 158
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A + M D ++ ++ +I G + + M G+ P+ TY L
Sbjct: 159 DQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSL 218
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQ 257
+ Y + G + S+ K+ S+ + + N+LI ++ AEG+L M +
Sbjct: 219 ITEYCRDGKL-SLAFKV--FDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKR 275
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG-----SSLVNGDYLDIIHALAVSGHG 312
A + P+ +T+ LM G G +D L + +LV Y +I + G+
Sbjct: 276 AHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVT--YNILISGFSKVGNS 333
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLL 369
+ E+ M G+ PS TYT LM + + D++ + L+
Sbjct: 334 SVVSELVR---------------EMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLM 378
Query: 370 AQNGSSLVNGDYLDIIHALAVSGH 393
+ G Y +IH L + G+
Sbjct: 379 KRIGLVPDQHTYGVLIHGLCIKGN 402
>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 738
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 29/248 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L + N F D L +ESQG+EPN T++ +I C G +E
Sbjct: 469 DVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEG------LCSAGKVE 522
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQA------NDMASAEGILTMMSQAGLEPSAQ 195
A + +++ ++ IS ++ AL+ G+ +A +++ A +L M + ++PS
Sbjct: 523 EAEEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKV 582
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL--CFSFQLTNLLILV-----SSDMASA 248
Y+K+ +G+M+ T LF+ F+ I++ ++ + A
Sbjct: 583 MYSKIFTALCCNGNMEGAHTLF-------NLFIHTGFTPDAVTYTIMINGYCKTNCLPEA 635
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHA 305
+ M + G+ P A TYT ++ GY K + L + D Y II
Sbjct: 636 HELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKG 695
Query: 306 LAVSGHGE 313
L SGH E
Sbjct: 696 LLNSGHTE 703
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 67 EDPFSVHTGELDVPLDISHYNALLRVY-----LDNEHTFSPTDFLAK-LESQGIEPNRVT 120
E+ F+ GE V + + Y AL+ Y ++ H L + + ++P++V
Sbjct: 525 EEFFNWLKGE-SVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVM 583
Query: 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEG 180
Y SK+ + C +GN+EGA + F + +I G+ + N + A
Sbjct: 584 Y------SKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHE 637
Query: 181 ILTMMSQAGLEPSAQTYTKLMCGYAK 206
+ M + G+ P A TYT ++ GY K
Sbjct: 638 LFKDMKERGITPDAVTYTIMINGYCK 663
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 106/277 (38%), Gaps = 26/277 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y A++R + + ++E QG+ P+ Y L+ YC N + A
Sbjct: 298 YTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVY------CALVHGYCNSRNFDKALA 351
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + + +F+ +++ + + ++GL + Y L
Sbjct: 352 VYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALC 411
Query: 206 KHGDMDSIKTKIPSLKP-QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
K G +D + LK Q ++ + L N L + A+ + M + G +P
Sbjct: 412 KLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPI-EAQSLFKEMEERGFKPDV 470
Query: 265 QTYTKLMCGYAKH-GDMDSVRRL--LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
Y L G+ ++ D +++ L + G + + II L +G E +E
Sbjct: 471 VAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEF--- 527
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
F+WL+G +E S + YT L+ GY +
Sbjct: 528 -------FNWLKGE-----SVEISVEIYTALVNGYCE 552
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 133/325 (40%), Gaps = 49/325 (15%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+R + ++E G PN VTY + LI YC+ G I+
Sbjct: 213 NVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTY------NTLIDAYCKMGRID 266
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L+ M K + +N +I G + M A IL M G P TY L+
Sbjct: 267 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLL 326
Query: 202 CGYAKHGDM--------DSIKTKI-PSLKPQSELF--LCFSFQLTNLLILVSSDMASAEG 250
GY K G+ + ++ + PS+ + L +C + ++ A
Sbjct: 327 NGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMC-----------KARNLNRAME 375
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALA 307
M GL P+ +TYT L+ G+++ G ++ R+L +SG S Y IH
Sbjct: 376 FFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHC 435
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---S 364
V E ++E +V M + GL P +Y+ ++ G+ + G++D
Sbjct: 436 VL---ERMEEALGVV------------QEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ 480
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALA 389
+++ + + G S Y +I L
Sbjct: 481 MKQEMVEKGVSPDAVTYSSLIQGLC 505
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 131/320 (40%), Gaps = 59/320 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+ Y L + S+G++PN LIS + +I+ C++G+++
Sbjct: 248 NVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPN------LISYNVIINGLCREGSMK 301
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +ILE M K F E +N L+ G+ + + A I M + G+ PS TYT L+
Sbjct: 302 EAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALI 361
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELF--LCFSFQLTNLL-----IL--------- 240
K +++ + +I L+P + L F LL IL
Sbjct: 362 NSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 421
Query: 241 --------------VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SV 283
V M A G++ M + GL P +Y+ ++ G+ + G++D +
Sbjct: 422 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQM 481
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
++ + + G S Y +I L E+ + ++ L+ GL
Sbjct: 482 KQEMVEKGVSPDAVTYSSLIQGLC---------EMRRLTEACDLSQEMLD------MGLP 526
Query: 344 PSAQTYTKLMCGYAKHGDMD 363
P TYT L+ Y GD++
Sbjct: 527 PDEFTYTTLINAYCVEGDLN 546
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 16/206 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y AL+ + +F ++ +G+ PN TY + LI + + G + A +
Sbjct: 357 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY------TTLIDGFSRQGLLNEAYR 410
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
IL M + F S +NA I+GH M A G++ M + GL P +Y+ ++ G+
Sbjct: 411 ILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFC 470
Query: 206 KHGDMD---SIKTKI--PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ G++D +K ++ + P + + L + L + S E M GL
Sbjct: 471 RKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQE-----MLDMGL 525
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRL 286
P TYT L+ Y GD++ L
Sbjct: 526 PPDEFTYTTLINAYCVEGDLNKALHL 551
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 83/205 (40%), Gaps = 18/205 (8%)
Query: 72 VHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK-- 129
+H G L D Y+ L+ T L KL + P+ VTY LI N
Sbjct: 556 IHKGFLP---DAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNI 612
Query: 130 -------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGIL 182
LI +C G + A ++ E M ++ E V+N +I+GH + ++ A +
Sbjct: 613 EFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLY 672
Query: 183 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
M +G P T L+ K G + + I L +L +L+ ++
Sbjct: 673 KEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRL---NEAELAKVLVEIN 729
Query: 243 ---SDMASAEGILTMMSQAGLEPSA 264
+M + +LT M++ GL P++
Sbjct: 730 HKEGNMEAVLNVLTDMAKDGLLPNS 754
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 136/308 (44%), Gaps = 44/308 (14%)
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
V +A++ S+ + SAE + M ++ + P+ TY L+ G+ G++ K
Sbjct: 183 VLDAIV--RSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQ----KGLGC 236
Query: 221 KPQSELFLCFSFQLT-NLLILVSSDMA---SAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
+ E C +T N LI M A G+L MS G++P+ +Y ++ G +
Sbjct: 237 FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCR 296
Query: 277 HGDMDSVRRLLAQSG-----------SSLVNGDYLDIIHALAVSGHGEYI-DEVS-AIVC 323
G M +L + G ++L+NG + A+ H E + + VS ++V
Sbjct: 297 EGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVT 356
Query: 324 FVNICFHWLEGPMMSQA----------GLEPSAQTYTKLMCGYAKHGDMDSIRRLL---A 370
+ + + +++A GL P+ +TYT L+ G+++ G ++ R+L
Sbjct: 357 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 416
Query: 371 QNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGV--GYSADAANH---IYHLINKG 425
++G S Y IH V E ++E + +Q V G + D ++ I KG
Sbjct: 417 ESGFSPSVVTYNAFIHGHCVL---ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKG 473
Query: 426 QIDAAYRI 433
++D A+++
Sbjct: 474 ELDRAFQM 481
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 84/225 (37%), Gaps = 24/225 (10%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+ P+ VTY S LI C+ + A + + M D P E + LI +
Sbjct: 488 KGVSPDAVTY------SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 541
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT---------KIPSLKP 222
D+ A + M G P A TY+ L+ G K K +PS
Sbjct: 542 EGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVT 601
Query: 223 QSELFL-CFSFQLTNLLILVSSD-----MASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
L C + + +++ L+ M A+ + M + +P Y ++ G+ +
Sbjct: 602 YDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCR 661
Query: 277 HGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
G++ L + SG + +I AL G E + EV
Sbjct: 662 GGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEV 706
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 149/361 (41%), Gaps = 40/361 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V LD + Y +L + + S + +++ +G+ + VTY + +I+ C+
Sbjct: 357 VILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTY------TTMINGLCRAV 410
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A K+L+ M + + E + LI G+ + MA A + M Q G+ P+ TYT
Sbjct: 411 ELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYT 470
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQS-ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
L G K GD+ + + + + EL C L N L + + A + M
Sbjct: 471 ALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLC-KAGYLEQAMRTMADMDT 529
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEY 314
A L+P TYT L+ K GD+D LL + G Y +++ +SG E
Sbjct: 530 ACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEG 589
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGS 374
++ W M + + P+A TY LM Y +M S + S
Sbjct: 590 GKKL----------LDW-----MLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRS 634
Query: 375 SLVNGDYLDIIHALAVSGHGE---------YIDEIISKIQPGVGYSADAANHIYHLINKG 425
V + + + + + GH + + DE+ IQ G +A + + + L+NK
Sbjct: 635 RDVGPN--ENTYNILIKGHCKARNMKEALYFHDEM---IQKGFRLTATSYSALIRLLNKK 689
Query: 426 Q 426
+
Sbjct: 690 K 690
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 109/270 (40%), Gaps = 24/270 (8%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ + G+EPN Y + +++ C G I A +++E M + + E ++
Sbjct: 313 LLDEMVAGGVEPNATVY------TSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTT 366
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
++ G D+ SA M + GL TYT ++ G + +++ + + + +
Sbjct: 367 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARR 426
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
++ + MA A + M Q G+ P+ TYT L G K GD+ +
Sbjct: 427 LDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAAN 486
Query: 285 RLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
LL + G L Y +I+ L +G+ E A M A
Sbjct: 487 ELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMAD---------------MDTAC 531
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
L+P TYT L+ K GD+D LL +
Sbjct: 532 LKPDVYTYTTLIDALCKSGDLDRAHSLLQE 561
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 121/279 (43%), Gaps = 20/279 (7%)
Query: 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEG 180
++ + S + L+ C G ++ A ++ + M ++ G+ LI+GH ++ +A
Sbjct: 256 HKNVCSYNILLKALCDAGRVKDARQLFDEMASAPDVVTYGI---LIHGHCALGELENAVK 312
Query: 181 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL 240
+L M G+EP+A YT ++ G + S ++ Q ++ L + T L
Sbjct: 313 LLDEMVAGGVEPNATVYTSVVALLCDKGWI-SDALRVVEDMVQRKVILDEALYTTVLSGF 371
Query: 241 VSS-DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDY 299
+ D+ SA M + GL TYT ++ G + +++ +LL + + ++ D
Sbjct: 372 CNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVD- 430
Query: 300 LDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
++ + + + G+ + A F M Q G+ P+ TYT L G K
Sbjct: 431 -EVTYTVLIDGYCKRGKMAEA--------FQMHNA--MVQRGVTPNVVTYTALTDGLCKQ 479
Query: 360 GDMDSIRRLL---AQNGSSLVNGDYLDIIHALAVSGHGE 395
GD+ + LL + G L Y +I+ L +G+ E
Sbjct: 480 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLE 518
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 133/305 (43%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 138 YPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + +++ +S + L S M A + M + GL P++ T+T L+
Sbjct: 198 RLKSAMHASGVHPDVYT-YSVLINGL--CKESKMDDANKLFDEMLEKGLVPNSVTFTTLI 254
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I+ L G + IDE
Sbjct: 255 DGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDE------- 307
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+D+ R+++ Q L + Y
Sbjct: 308 ------------MSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAY 355
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG D + I KG + +++ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLS-VGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 439 RSANI 443
R ++
Sbjct: 415 RDGHV 419
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 122/299 (40%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + G+ P+ V+Y L++ Y
Sbjct: 135 ECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNG------YI 188
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M ++ LI G + + M A + M + GL P++
Sbjct: 189 RLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSV 248
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS L ++ + D+ A ++ M
Sbjct: 249 TFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEM 308
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+D+ R+++ Q L + Y +I L G
Sbjct: 309 SMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P +TYT ++ + K GD+ +LL +
Sbjct: 369 --VDAEKML-------------REMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKE 412
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 109/287 (37%), Gaps = 73/287 (25%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN + R Y N T + K++ ++PN T +IS YC++GN+
Sbjct: 235 DVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERTC------GIIISGYCKEGNMT 288
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + L M++ + VFN+LI G+ A D + LT+M + G++P T++ +M
Sbjct: 289 EALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIM 348
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
++ G MD + E I M +AG+E
Sbjct: 349 NAWSSAGLMD-----------------------------------NCEEIFNDMVKAGIE 373
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P Y+ L GY + G LL ++S +G + +
Sbjct: 374 PDIHAYSILAKGYVRAGQPRKAESLLT------------------SMSKYGVQTN----V 411
Query: 322 VCFVNICFHWLEGPMMSQA----------GLEPSAQTYTKLMCGYAK 358
V F I W M +A G P+ +TY L+ GY +
Sbjct: 412 VIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGE 458
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 111/308 (36%), Gaps = 67/308 (21%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
NA++ + D+ K++ G +P TY LI ++ G + K+
Sbjct: 134 NAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIV------GRPYESMKL 187
Query: 147 LEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
LE M +D+ ++ +N LI + A +L M +G++P TY + YA
Sbjct: 188 LEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYA 247
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
++G+ + AE ++ M ++P+ +
Sbjct: 248 QNGETE-----------------------------------KAERLILKMQYNKVKPNER 272
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSG-----------SSLVNGDYLDIIHALAVSGHGEY 314
T ++ GY K G+M R L + +SL+ G YLD V
Sbjct: 273 TCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKG-YLDATDTNGVDEALTL 331
Query: 315 IDEVSA---IVCFVNICFHWLEGPMMS----------QAGLEPSAQTYTKLMCGYAKHGD 361
++E +V F I W +M +AG+EP Y+ L GY + G
Sbjct: 332 MEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQ 391
Query: 362 MDSIRRLL 369
LL
Sbjct: 392 PRKAESLL 399
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 29/246 (11%)
Query: 51 SKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLE 110
S +C E GN+ F EL V + +N+L++ YLD T + L +E
Sbjct: 279 SGYCKE-----GNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLME 333
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
GI+P+ VT+ S +++ + G ++ +I M ++ L G+
Sbjct: 334 EFGIKPDVVTF------STIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYV 387
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKI------PSLK 221
+A AE +LT MS+ G++ + +T ++ G+ G MD S+ K+ P+LK
Sbjct: 388 RAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLK 447
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
L + + AE IL+ M + G+ P T + + G
Sbjct: 448 TYETLIWGYG---------EAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLFK 498
Query: 282 SVRRLL 287
R+L
Sbjct: 499 EANRIL 504
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 133/334 (39%), Gaps = 41/334 (12%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
L +G +P +TY + L++ + + +L + D + NA+I
Sbjct: 86 LTEEGHKPTLITY------TTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINA 139
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD-MDSIKT-----KIPSLKP 222
S + + A I M + G +P+ TY L+ G+ G +S+K + ++KP
Sbjct: 140 FSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKP 199
Query: 223 QSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
+ N+LI + A +L M +G++P TY + YA++G+
Sbjct: 200 NDRTY--------NILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGE 251
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+ RL+ + + V + + + +SG+ + + A+ M +
Sbjct: 252 TEKAERLILKMQYNKVKPN--ERTCGIIISGYCKEGNMTEALRFLYR----------MKE 299
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEY 396
G+ P+ + L+ GY D + + L + D + I++A + +G +
Sbjct: 300 LGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDN 359
Query: 397 IDEIISKIQPGVGYSADAANHIYHLINKGQIDAA 430
+EI + + G D H Y ++ KG + A
Sbjct: 360 CEEIFNDMVKA-GIEPDI--HAYSILAKGYVRAG 390
>gi|449503889|ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Cucumis sativus]
Length = 697
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN ++ + ++ L ++GI PN VTY LI +C++GN++
Sbjct: 473 NIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGG------FCRNGNMD 526
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++LE + + F FN+LI G QA+ +A G T M + + P+ TY L+
Sbjct: 527 KAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILI 586
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
C + GD+ + K+ ++P + FSF + AE + M
Sbjct: 587 CSFCAIGDVSRSTHLLRQMKLHGIQPDT-----FSFNALIQGYTGKNRFQKAEKLFDSML 641
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ G++P TY L+ K G D R +
Sbjct: 642 RLGIQPDNYTYGALIKSLCKSGRHDKAREIF 672
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 98/254 (38%), Gaps = 23/254 (9%)
Query: 123 QLISNSKLISKYCQDGNIEGATKILEFMR--DKTFPISEGVFNALIYGHSQANDMASAEG 180
QL+ ++ L YC N + ++ ++ + + S FN + + D+
Sbjct: 369 QLVCDNIL---YCLSNNSMASEAVMFLIKTGKEGYVPSSSTFNITLACVLKKLDLKVTCT 425
Query: 181 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL 240
+ Q+G++P TY L+ K G M+ + L + +S+ + +
Sbjct: 426 VFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLC 485
Query: 241 VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD-- 298
M A + + G+ P+ TY L+ G+ ++G+MD + LL S D
Sbjct: 486 KGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIF 545
Query: 299 -YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
+ +I L + E +A CF M + + P+ TY L+C +
Sbjct: 546 TFNSLIDGLCQAHKHE-----NAFGCFTE----------MVEWDVPPNVITYNILICSFC 590
Query: 358 KHGDMDSIRRLLAQ 371
GD+ LL Q
Sbjct: 591 AIGDVSRSTHLLRQ 604
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 114 IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
+ PN +TY LI + +C G++ +T +L M+ FNALI G++ N
Sbjct: 575 VPPNVITYNILICS------FCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKN 628
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
AE + M + G++P TY L+ K G D + S+K
Sbjct: 629 RFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMK 676
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 111/281 (39%), Gaps = 50/281 (17%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
+ ++E G PN TY + LI + A K+L+ M+++ +E +
Sbjct: 286 LMKQMEGLGYFPNVFTY------TILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRS 339
Query: 165 LIYG--HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC----------GYAKHGDMDS 212
L++G A D A E +L + + Q T+L+C A M
Sbjct: 340 LVHGVFRCIAPDKA-FELLLEFVER------KQGITQLVCDNILYCLSNNSMASEAVMFL 392
Query: 213 IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
IKT P S +F +T +L D+ + Q+G++P TY L+
Sbjct: 393 IKTGKEGYVPSSS-----TFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIE 447
Query: 273 GYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHA----LAVSGHGEYIDEVSAIVCFVNIC 328
K G M+ R + + L+N + I++ + G+ +D S +
Sbjct: 448 ALYKAGKMEIGNRYMDR----LINDGLISNIYSYNMVIDCLCKGKSMDRASEM------- 496
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
F L G+ P+ TY L+ G+ ++G+MD + LL
Sbjct: 497 FRDLH-----NRGISPNIVTYNTLIGGFCRNGNMDKAQELL 532
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 152/389 (39%), Gaps = 37/389 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN L+ + A+++ +G +P+ VTY + L+ C G +
Sbjct: 169 NIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTY------NILLDALCSAGRVG 222
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ M ++ L+ G ++ + A + M G+ Y L+
Sbjct: 223 AARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLL 282
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
AK G+MD + + + + FSF + ++ +A + M ++G +
Sbjct: 283 ATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCK 342
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P +Y L+ YA+ GD R++L ++G Y +IH LA G +DE
Sbjct: 343 PDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQ---VDEA 399
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
A++ M AG P TY +LM K G+ RL Q V
Sbjct: 400 FAVL------------EEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVE 447
Query: 379 GDYLDIIHALAVSG--HGEYIDE--IISKIQPGVGYSADAANHIYHLINKGQIDAAYRIV 434
D L +A+ + G + +DE ++ K VG D A +Y ++ I AA+R
Sbjct: 448 PDTLS--YAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKA--MYRIL----IRAAHRAG 499
Query: 435 NT-LARSANINGEQLPVGGFLVRHMVKTN 462
+T L + +PV L KT
Sbjct: 500 DTELEAQLKHESQFMPVESRLTSQKAKTK 528
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 128/341 (37%), Gaps = 34/341 (9%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+KLI G E A + + + K + +N LI ++ + SA + M
Sbjct: 69 TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
G EP TY L+ K G + ++ ++ + L + NLL+ +
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERG---LTPNIPTYNLLMDAFRKVGQ 185
Query: 248 ---AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLD 301
A G+ M + G +PS TY L+ G + + R+L + G S + Y
Sbjct: 186 LDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYST 245
Query: 302 IIHALAVSGHGE--------------------YIDEVSAIVCFVNICFHWLEGPMMSQAG 341
+++ L SG E Y ++ + N+ W MS+ G
Sbjct: 246 LVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKG 305
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLD---IIHALAVSGHGEYID 398
P A ++ +M K D+ R + A+ S D + +I + A G
Sbjct: 306 FHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQAR 365
Query: 399 EIISK-IQPGVGYSADAANHIYH-LINKGQIDAAYRIVNTL 437
+++ + ++ G N + H L GQ+D A+ ++ +
Sbjct: 366 QMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEM 406
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 134/305 (43%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 121 YPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 180
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S + A + M GL P++ T+T L+
Sbjct: 181 RLKSAMLASGVQPDVYT-YSVLINGL--CKESKIDDANELFDEMLVKGLVPNSVTFTTLI 237
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G IDE
Sbjct: 238 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE------- 290
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+D+ R+ + Q + L + Y
Sbjct: 291 ------------MSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVY 338
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG DA + I KG + +++ +
Sbjct: 339 TALISGLCREGXSVDAEKMLREMLS-VGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 397
Query: 439 RSANI 443
R ++
Sbjct: 398 RDGHV 402
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 102/210 (48%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 194 DVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTF------TTLIDGHCKNGRVD 247
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 307
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+D+ + + ++ + L + ++ ++ L S AE +L M G
Sbjct: 308 DGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXS--VDAEKMLREMLSVG 365
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P A+TYT ++ + K GD+ +LL +
Sbjct: 366 LKPDARTYTMIINEFCKKGDVWKGSKLLKE 395
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 115/564 (20%), Positives = 208/564 (36%), Gaps = 135/564 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ L+R Y T + L +ES G+ PN+V Y ++S+ +C++G + + K
Sbjct: 185 FGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSS------FCREGRNDDSEK 238
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMS---QAGL-EPSAQTYTKLM 201
++E MR++ FN+ I + + A I + M GL P++ TY ++
Sbjct: 239 MVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K G ++ KT S++ +L S+ + ++ AE +L M+ G+
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIG 358
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
PS +Y LM G K G + + ++
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVG--------------------------------- 385
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ--NGSSLVNG 379
+M + G+ P A TY L+ GY G +D+ + LL + + L N
Sbjct: 386 --------------LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNA 431
Query: 380 DYLDII-HALAVSGHGEYIDEIISKI-QPGVGYSADAANHIYH-LINKGQIDAAYRIVNT 436
+I+ H+L G +E++ K+ + G G N I L G++D A IV
Sbjct: 432 YTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKG 491
Query: 437 L-----ARSANINGEQLPVGGFLVRHMVKTN-QPGV-------------GYSADAAN--- 474
+ A N+ + G + +++ N P + G A+A N
Sbjct: 492 MRVHGSAALGNLGNSYI---GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFA 548
Query: 475 ----------------HIYHLINKGQIDAAYRIV---------------NTLARSANING 503
I+H +G+I +A+R++ N+L I
Sbjct: 549 EMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKN 608
Query: 504 EQLPVGGFLVRHMVKTNQP-----------------IDKVLAVCHRLTDENLHPRAFNLA 546
+ + G + K P ++ + + +N+ P F+
Sbjct: 609 QIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFK 668
Query: 547 VLIKAHVLKEDYTGAVETFEYCVN 570
LI+A D+ A E FE V+
Sbjct: 669 YLIEAFCKVPDFDMAQEVFETAVS 692
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ LL + A++ + ++P+ V Y I + +C+ G I
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHH------FCKQGKIS 576
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
A ++L+ M K S +N+LI G N + G++ M + G+ P+ TY
Sbjct: 577 SAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYN 633
>gi|125525011|gb|EAY73125.1| hypothetical protein OsI_00999 [Oryza sativa Indica Group]
Length = 634
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 54/278 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQ-GIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ YN L Y N+ T+ + + ++ Q G+ + T+ ++ YC++G +
Sbjct: 259 DVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERTW------GIIVGGYCREGRL 312
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A + + M+D + VFN L+ G ANDMA+ + +L +M Q G++P TY
Sbjct: 313 GEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTY--- 369
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
S QL L + MA + M +AG+
Sbjct: 370 ------------------------------SHQLNALSSM--GHMAKCMKVFDKMIEAGI 397
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
EP Q Y+ L GY + + LL Q G V + + +SG D +A
Sbjct: 398 EPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNV--VTFTTVISGWCSVADMGNA 455
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+ + M AG+ P+ +T+ L+ GY++
Sbjct: 456 VRVYA----------AMRDAGVRPNLRTFETLIWGYSE 483
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY-QQLISNSKLISKYCQDGNIEGAT 144
+N LL+ +LD + D L +E GI+P+ VTY QL + S + G++
Sbjct: 334 FNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSM-------GHMAKCM 386
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
K+ + M + V++ L G+ +A AE +L M + G+ P+ T+T ++ G+
Sbjct: 387 KVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGW 446
Query: 205 AKHGDM-DSIKT----KIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
DM ++++ + ++P F + + L AE +L MM AG
Sbjct: 447 CSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSEL-----KQPWKAEEVLQMMQDAG 501
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRR 285
+ P TY + + G +++ R
Sbjct: 502 VRPKQTTYCLVADAWKAVGLVENANR 527
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 109/297 (36%), Gaps = 60/297 (20%)
Query: 84 SHYNALLRVY------LDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
S +N L++ Y +++ F + PN TY + L+ +C
Sbjct: 185 STFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTY------NILVKAWCDA 238
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEG-ILTMMSQAGLEPSAQT 196
G +E A +++ MR +N L +++ ++ AE ++ M QAGL S +T
Sbjct: 239 GRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERT 298
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
+ ++ GY + G + + +K L F L ++DMA+ + +L +M
Sbjct: 299 WGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLME 358
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
Q G++P TY+ + + G M ++ +
Sbjct: 359 QFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDK--------------------------- 391
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
M +AG+EP Q Y+ L GY + + LL Q G
Sbjct: 392 --------------------MIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMG 428
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + D Y+ L + Y+ + + L ++ G+ PN VT+ + +IS +C
Sbjct: 394 EAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTF------TTVISGWC 447
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
++ A ++ MRD + F LI+G+S+ AE +L MM AG+ P
Sbjct: 448 SVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAGVRPKQT 507
Query: 196 TY 197
TY
Sbjct: 508 TY 509
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 129/353 (36%), Gaps = 37/353 (10%)
Query: 90 LRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEF 149
+R +D L G P+ VTY L++ L S+ D +L
Sbjct: 86 MRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLA--ALTSQRAFDT----IPWLLAE 139
Query: 150 MRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG- 208
+ D FNALI +A M A M +G P+A T+ L+ GY G
Sbjct: 140 VEDAGLRPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGR 199
Query: 209 --DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD---MASAEGILTMMSQAGLEPS 263
+ + + S E + + N+L+ D + A ++ M +G +P
Sbjct: 200 PEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPD 259
Query: 264 AQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
TY L YAK+ + L +AQ + II V G+ A
Sbjct: 260 VVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGII----VGGYCREGRLGEA 315
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM---DSIRRLLAQNGSSLV 377
+ C M +G+ P+ + L+ G+ DM D + L+ Q G
Sbjct: 316 LRCVRQ----------MKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPD 365
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISK-IQPGVGYSADAANHIYHLINKGQIDA 429
Y ++AL+ GH ++ K I+ G+ + +Y ++ KG + A
Sbjct: 366 IVTYSHQLNALSSMGHMAKCMKVFDKMIEAGI----EPDPQVYSILAKGYVRA 414
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 135/303 (44%), Gaps = 44/303 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLA-KLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D++ +N L+ V L E +F + +L K+E G P VTY ++ YC+ G
Sbjct: 192 DVATFNILINV-LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH------WYCKKGRF 244
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A ++L+ M+ K +N LI+ ++N +A +L M + + P+ TY L
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT------NLLI---LVSSDMASAEGI 251
+ G++ G K I S + +E+ SF L+ N LI + + A +
Sbjct: 305 INGFSNEG-----KVLIAS-QLLNEML---SFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAV 308
MM GL PS +Y L+ G K+ + D R + ++G + Y +I L
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
+G ++DE ++ MS+ G++P TY+ L+ G+ K G + + +
Sbjct: 416 NG---FLDEAVVLL------------NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Query: 369 LAQ 371
+ +
Sbjct: 461 VCR 463
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 12/220 (5%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H V D+ YN L+ + L + + I PN VTY LI+
Sbjct: 253 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING----- 307
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ +G + A+++L M + FNALI GH + A + MM GL P
Sbjct: 308 -FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS-FQLTNLL--ILVSSDMASAE 249
S +Y L+ G K+ + D + +K +C T ++ + + + A
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG---VCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+L MS+ G++P TY+ L+ G+ K G + + ++ +
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 121/304 (39%), Gaps = 30/304 (9%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P ++S Y LL N F +++ G+ R+TY + +I C++G
Sbjct: 366 PSEVS-YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY------TGMIDGLCKNGF 418
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
++ A +L M ++ALI G + +A+ I+ + + GL P+ Y+
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L+ + G + ++ + F+F + + + +A AE + M+ G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 260 LEPSAQTYTKLMCGYAKHGD---MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH----G 312
+ P+ ++ L+ GY G+ SV + + G Y ++ L GH
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 313 EYIDEVSAIVCFVN-ICFHWLEGPM---------------MSQAGLEPSAQTYTKLMCGY 356
+++ + A+ V+ + ++ L M M Q + P + TYT L+ G
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 357 AKHG 360
+ G
Sbjct: 659 CRKG 662
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+E +R T+ LIS K C +G I A +++ M + + +A++ ++
Sbjct: 818 RGVEVDRYTFNMLIS------KCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
+ + +L MS+ G+ P ++ Y L+ G + GD IKT + +C
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD---IKTAFVVKEEMIAHKICPP 928
Query: 232 FQLTNLLILVSSDMASAEG---ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRR 285
+ ++ + A+ +L M + L P+ ++T LM K+G++ +R
Sbjct: 929 NVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRV 988
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSG 310
+++ G L Y +I L G
Sbjct: 989 VMSNCGLKLDLVSYNVLITGLCAKG 1013
>gi|115435438|ref|NP_001042477.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|17385740|dbj|BAB78680.1| putative leaf protein [Oryza sativa Japonica Group]
gi|113532008|dbj|BAF04391.1| Os01g0228400 [Oryza sativa Japonica Group]
gi|215740499|dbj|BAG97155.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 636
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 112/278 (40%), Gaps = 54/278 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQ-GIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ YN L Y N+ T+ + + ++ Q G+ + T+ ++ YC++G +
Sbjct: 259 DVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERTW------GIIVGGYCREGRL 312
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A + + M+D + VFN L+ G ANDMA+ + +L +M Q G++P TY
Sbjct: 313 GEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTY--- 369
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
S QL L + MA + M +AG+
Sbjct: 370 ------------------------------SHQLNALSSM--GHMAKCMKVFDKMIEAGI 397
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
EP Q Y+ L GY + + LL Q G V + + +SG D +A
Sbjct: 398 EPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNV--VTFTTVISGWCSVADMGNA 455
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+ + M AG+ P+ +T+ L+ GY++
Sbjct: 456 VRVYA----------AMRDAGVRPNLRTFETLIWGYSE 483
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 18/206 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY-QQLISNSKLISKYCQDGNIEGAT 144
+N LL+ +LD + D L +E GI+P+ VTY QL + S + G++
Sbjct: 334 FNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSM-------GHMAKCM 386
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
K+ + M + V++ L G+ +A AE +L M + G+ P+ T+T ++ G+
Sbjct: 387 KVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTTVISGW 446
Query: 205 AKHGDM-DSIKT----KIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
DM ++++ + ++P F + + L AE +L MM AG
Sbjct: 447 CSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSEL-----KQPWKAEEVLQMMQDAG 501
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRR 285
+ P TY + + G +++ R
Sbjct: 502 VRPKQTTYCLVADAWKAVGLVENANR 527
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 109/297 (36%), Gaps = 60/297 (20%)
Query: 84 SHYNALLRVY------LDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
S +N L++ Y +++ F + PN TY + L+ +C
Sbjct: 185 STFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTY------NILVKAWCDA 238
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEG-ILTMMSQAGLEPSAQT 196
G +E A +++ MR +N L +++ ++ AE ++ M QAGL S +T
Sbjct: 239 GRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERT 298
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
+ ++ GY + G + + +K L F L ++DMA+ + +L +M
Sbjct: 299 WGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLME 358
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
Q G++P TY+ + + G M ++ +
Sbjct: 359 QFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDK--------------------------- 391
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
M +AG+EP Q Y+ L GY + + LL Q G
Sbjct: 392 --------------------MIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMG 428
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + D Y+ L + Y+ + + L ++ G+ PN VT+ + +IS +C
Sbjct: 394 EAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTF------TTVISGWC 447
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
++ A ++ MRD + F LI+G+S+ AE +L MM AG+ P
Sbjct: 448 SVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAGVRPKQT 507
Query: 196 TY 197
TY
Sbjct: 508 TY 509
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 129/353 (36%), Gaps = 37/353 (10%)
Query: 90 LRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEF 149
+R +D L G P+ VTY L++ L S+ D +L
Sbjct: 86 MRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLA--ALTSQRAFDT----IPWLLAE 139
Query: 150 MRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG- 208
+ D FNALI +A M A M +G P+A T+ L+ GY G
Sbjct: 140 VEDAGLRPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGR 199
Query: 209 --DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD---MASAEGILTMMSQAGLEPS 263
+ + + S E + + N+L+ D + A ++ M +G +P
Sbjct: 200 PEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPD 259
Query: 264 AQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
TY L YAK+ + L +AQ + II V G+ A
Sbjct: 260 VVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGII----VGGYCREGRLGEA 315
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM---DSIRRLLAQNGSSLV 377
+ C M +G+ P+ + L+ G+ DM D + L+ Q G
Sbjct: 316 LRCVRQ----------MKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPD 365
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISK-IQPGVGYSADAANHIYHLINKGQIDA 429
Y ++AL+ GH ++ K I+ G+ + +Y ++ KG + A
Sbjct: 366 IVTYSHQLNALSSMGHMAKCMKVFDKMIEAGI----EPDPQVYSILAKGYVRA 414
>gi|449433429|ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g16890, mitochondrial-like
[Cucumis sativus]
Length = 688
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 16/211 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN ++ + ++ L ++GI PN VTY LI +C++GN++
Sbjct: 464 NIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGG------FCRNGNMD 517
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++LE + + F FN+LI G QA+ +A G T M + + P+ TY L+
Sbjct: 518 KAQELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILI 577
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
C + GD+ + K+ ++P + FSF + AE + M
Sbjct: 578 CSFCAIGDVSRSTHLLRQMKLHGIQPDT-----FSFNALIQGYTGKNRFQKAEKLFDSML 632
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ G++P TY L+ K G D R +
Sbjct: 633 RLGIQPDNYTYGALIKSLCKSGRHDKAREIF 663
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 95/252 (37%), Gaps = 28/252 (11%)
Query: 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGIL 182
QL+ ++ L YC N + ++ F S FN + + D+ +
Sbjct: 369 QLVCDNIL---YCLSNNSMASEAVM-------FXPSSSTFNITLACVLKKLDLKVTCTVF 418
Query: 183 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
Q+G++P TY L+ K G M+ + L + +S+ + +
Sbjct: 419 DNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKG 478
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---Y 299
M A + + G+ P+ TY L+ G+ ++G+MD + LL S D +
Sbjct: 479 KSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTF 538
Query: 300 LDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
+I L + E +A CF M + + P+ TY L+C +
Sbjct: 539 NSLIDGLCQAHKHE-----NAFGCFTE----------MVEWDVPPNVITYNILICSFCAI 583
Query: 360 GDMDSIRRLLAQ 371
GD+ LL Q
Sbjct: 584 GDVSRSTHLLRQ 595
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 114 IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
+ PN +TY LI + +C G++ +T +L M+ FNALI G++ N
Sbjct: 566 VPPNVITYNILICS------FCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKN 619
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
AE + M + G++P TY L+ K G D + S+K
Sbjct: 620 RFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMK 667
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 135/303 (44%), Gaps = 44/303 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLA-KLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D++ +N L+ V L E +F + +L K+E G P VTY ++ YC+ G
Sbjct: 192 DVATFNILINV-LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH------WYCKKGRF 244
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A ++L+ M+ K +N LI+ ++N +A +L M + + P+ TY L
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT------NLLI---LVSSDMASAEGI 251
+ G++ G K I S + +E+ SF L+ N LI + + A +
Sbjct: 305 INGFSNEG-----KVLIAS-QLLNEML---SFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAV 308
MM GL PS +Y L+ G K+ + D R + ++G + Y +I L
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
+G ++DE ++ MS+ G++P TY+ L+ G+ K G + + +
Sbjct: 416 NG---FLDEAVVLL------------NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 460
Query: 369 LAQ 371
+ +
Sbjct: 461 VCR 463
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 12/220 (5%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H V D+ YN L+ + L + + I PN VTY LI+
Sbjct: 253 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING----- 307
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ +G + A+++L M + FNALI GH + A + MM GL P
Sbjct: 308 -FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS-FQLTNLL--ILVSSDMASAE 249
S +Y L+ G K+ + D + +K +C T ++ + + + A
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG---VCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+L MS+ G++P TY+ L+ G+ K G + + ++ +
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 121/304 (39%), Gaps = 30/304 (9%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P ++S Y LL N F +++ G+ R+TY + +I C++G
Sbjct: 366 PSEVS-YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY------TGMIDGLCKNGF 418
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
++ A +L M ++ALI G + +A+ I+ + + GL P+ Y+
Sbjct: 419 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 478
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L+ + G + ++ + F+F + + + +A AE + M+ G
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 538
Query: 260 LEPSAQTYTKLMCGYAKHGD---MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH----G 312
+ P+ ++ L+ GY G+ SV + + G Y ++ L GH
Sbjct: 539 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 598
Query: 313 EYIDEVSAIVCFVN-ICFHWLEGPM---------------MSQAGLEPSAQTYTKLMCGY 356
+++ + A+ V+ + ++ L M M Q + P + TYT L+ G
Sbjct: 599 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 658
Query: 357 AKHG 360
+ G
Sbjct: 659 CRKG 662
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+E +R T+ LIS K C +G I A +++ M + + +A++ ++
Sbjct: 818 RGVEVDRYTFNMLIS------KCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 871
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
+ + +L MS+ G+ P ++ Y L+ G + GD IKT + +C
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD---IKTAFVVKEEMIAHKICPP 928
Query: 232 FQLTNLLILVSSDMASAEG---ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRR 285
+ ++ + A+ +L M + L P+ ++T LM K+G++ +R
Sbjct: 929 NVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRV 988
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSG 310
+++ G L Y +I L G
Sbjct: 989 VMSNCGLKLDLVSYNVLITGLCAKG 1013
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 29/311 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN ++ + + + L+++E+ GI PN TY S +I CQ G E
Sbjct: 291 DTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTY------SIMIHGLCQSGEPE 344
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A+ +LE M K + V+ LI G+ + +++ A I M++ + P Y L+
Sbjct: 345 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLI 404
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G +K G ++ ++ + L F++ L + D+ SAE ++ M GL+
Sbjct: 405 FGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLK 464
Query: 262 PSAQTYTKLMCGYAKHGDMDSVR---RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P+ Y L+ Y K D++ V + + G L N Y +IH L+ SG+ E V
Sbjct: 465 PNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRV 524
Query: 319 ------SAIVCFVNICFHWLEG--------------PMMSQAGLEPSAQTYTKLMCGYAK 358
+ V V++ + G MS+ G++P+ Y L+ G K
Sbjct: 525 LSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCK 584
Query: 359 HGDMDSIRRLL 369
GD+ R +
Sbjct: 585 SGDISYARNVF 595
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 125/302 (41%), Gaps = 63/302 (20%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI---------------------- 140
+D L ++ ++G++PN Y + LIS YC++GN+
Sbjct: 347 SDLLEEMTTKGLKPNAFVY------APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCY 400
Query: 141 -------------EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
E +TK M+++ +E ++ LI+G+ + D+ SAE ++ M
Sbjct: 401 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 460
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF--LCFSFQLTNLLILVSSDM 245
GL+P+ Y L+ Y K D++ + + S+ Q + + + NL S +M
Sbjct: 461 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNL--SSSGNM 518
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDI 302
+A +L+ + + G P Y+ L+ G K D + +L + V+ + Y +
Sbjct: 519 EAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 578
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
I L SG Y V F +I GL P+ TYT L+ G K GD+
Sbjct: 579 IDGLCKSGDISYARNV-----FNSIL----------AKGLVPNCVTYTSLIDGSCKVGDI 623
Query: 363 DS 364
+
Sbjct: 624 SN 625
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 32/266 (12%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
GI P+ TY S LI YC+ + A K+L MR++ ++ +N LI G ++
Sbjct: 112 GISPDVYTY------STLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS 165
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI-----PSLKPQSELF 227
+ A G M GL P TY L+ G K + K + LKP ++
Sbjct: 166 GAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVY 225
Query: 228 LCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
NL+ + + A ++ M AG++P+ TY L+ G K G MD
Sbjct: 226 -------ANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASL 278
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
LL Q D I + L + GH + ++ A F L M AG+ P+
Sbjct: 279 LLKQMVRDSHRPD--TITYNLIIEGHFRHHNKKDA--------FRLLSE--MENAGISPN 326
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQ 371
TY+ ++ G + G+ + LL +
Sbjct: 327 VYTYSIMIHGLCQSGEPEKASDLLEE 352
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 110/526 (20%), Positives = 216/526 (41%), Gaps = 75/526 (14%)
Query: 46 FVY--LNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPT 103
FVY L S +C E G +L CE F T +++V D+ YN+L+ T
Sbjct: 363 FVYAPLISGYCRE---GNVSLACE-IFDKMT-KVNVLPDLYCYNSLIFGLSKVGRVEEST 417
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ A+++ +G+ PN TY S LI Y ++G++E A ++++ M D ++ ++
Sbjct: 418 KYFAQMQERGLLPNEFTY------SGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYI 471
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
L+ + +++D+ M G+ + Y L+ + G+M++ + ++
Sbjct: 472 DLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKN 531
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ + + ++D A GIL MS+ G++P+ Y L+ G K GD+
Sbjct: 532 GSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYA 591
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
R + S L G + + + ID + N + + E M G+
Sbjct: 592 RNVF---NSILAKGLVPNCVT------YTSLIDGSCKVGDISNAFYLYNE---MLATGIT 639
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQ----------NGSSLVNG--------DYLDII 385
P A Y+ L G + GD++ L+ + + ++LV+G + L ++
Sbjct: 640 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLL 699
Query: 386 HALAVSG---HGEYIDEIISKIQPG--------------VGYSADAANHIYHL----INK 424
H + G + I+ IIS + S AA H L IN+
Sbjct: 700 HVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQ 759
Query: 425 GQI--DAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINK 482
G+I D ++ + N++ ++R ++ +G S+ A + +L K
Sbjct: 760 GKIPLDVVDDMIRDHCKEGNLD------KALMLRDVIVAKSAPMGCSSYLA-IVDNLCRK 812
Query: 483 GQIDAAYRIVNTLARSANINGEQLPVGG--FLVRHMVKTNQPIDKV 526
G++ A ++ + + N+ + + G + RH N+ + K+
Sbjct: 813 GKLSEALNLLKEMDKRGNLQPTLVALLGIFWFRRHHHILNKSVTKM 858
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 104/242 (42%), Gaps = 12/242 (4%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ Y + G ++ A +++ MRD+ S NAL+ +A+ MA + M AG
Sbjct: 53 LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+ P TY+ L+ Y K + D+ K + ++ + ++ + + S + A
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
G M GL P TY L+ G K + + LL + + + + +++A +
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNV--VVYANLID 230
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G ++ E +A F I M AG++P+ TY L+ G K G MD LL
Sbjct: 231 G---FMREGNADEAFKMI-------KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLL 280
Query: 370 AQ 371
Q
Sbjct: 281 KQ 282
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 146/372 (39%), Gaps = 106/372 (28%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFM-RDKTFP------- 156
+ ++ + G++PN++TY L+ C+ G ++ A+ +L+ M RD P
Sbjct: 244 MIKEMVAAGVQPNKITYDNLVRG------LCKMGQMDRASLLLKQMVRDSHRPDTITYNL 297
Query: 157 ISEGVF----------------NA-----------LIYGHSQANDMASAEGILTMMSQAG 189
I EG F NA +I+G Q+ + A +L M+ G
Sbjct: 298 IIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 357
Query: 190 LEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
L+P+A Y L+ GY + G++ I K+ + +L+ C+ N LI S +
Sbjct: 358 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLY-CY-----NSLIFGLSKVG 411
Query: 247 SAE---GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII 303
E M + GL P+ TY+ L+ GY K+GD++S +L+ +
Sbjct: 412 RVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQR-------------- 457
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
M GL+P+ Y L+ Y K D++
Sbjct: 458 ---------------------------------MLDTGLKPNDVIYIDLLESYFKSDDIE 484
Query: 364 SIR---RLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH 420
+ + + G L N Y +IH L+ SG+ E ++S+I+ G D H+Y
Sbjct: 485 KVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKN-GSVPDV--HVYS 541
Query: 421 LINKGQIDAAYR 432
+ G A R
Sbjct: 542 SLISGLCKTADR 553
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 132/303 (43%), Gaps = 44/303 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLA-KLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D++ +N L+ V L E +F + +L K+E G P VTY ++ YC+ G
Sbjct: 232 DVATFNILINV-LCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH------WYCKKGRF 284
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A ++L+ M+ K +N LI+ ++N +A +L M + + P+ TY L
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT------NLLI---LVSSDMASAEGI 251
+ G++ G K I S L SF L+ N LI + + A +
Sbjct: 345 INGFSNEG-----KVLIASQLLNEML----SFGLSPNHVTFNALIDGHISEGNFKEALKM 395
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAV 308
MM GL PS +Y L+ G K+ + D R + ++G + Y +I L
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 455
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
+G ++DE ++ MS+ G++P TY+ L+ G+ K G + + +
Sbjct: 456 NG---FLDEAVVLL------------NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEI 500
Query: 369 LAQ 371
+ +
Sbjct: 501 VCR 503
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 92/220 (41%), Gaps = 12/220 (5%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H V D+ YN L+ + L + + I PN VTY LI+
Sbjct: 293 HMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING----- 347
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ +G + A+++L M + FNALI GH + A + MM GL P
Sbjct: 348 -FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 406
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS-FQLTNLL--ILVSSDMASAE 249
S +Y L+ G K+ + D + +K +C T ++ + + + A
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG---VCVGRITYTGMIDGLCKNGFLDEAV 463
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+L MS+ G++P TY+ L+ G+ K G + + ++ +
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/304 (20%), Positives = 121/304 (39%), Gaps = 30/304 (9%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P ++S Y LL N F +++ G+ R+TY + +I C++G
Sbjct: 406 PSEVS-YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY------TGMIDGLCKNGF 458
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
++ A +L M ++ALI G + +A+ I+ + + GL P+ Y+
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L+ + G + ++ + F+F + + + +A AE + M+ G
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 260 LEPSAQTYTKLMCGYAKHGD---MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH----G 312
+ P+ ++ L+ GY G+ SV + + G Y ++ L GH
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638
Query: 313 EYIDEVSAIVCFVN-ICFHWLEGPM---------------MSQAGLEPSAQTYTKLMCGY 356
+++ + A+ V+ + ++ L M M Q + P + TYT L+ G
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Query: 357 AKHG 360
+ G
Sbjct: 699 CRKG 702
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+E +R T+ LIS K C +G I A +++ M + + +A++ ++
Sbjct: 858 RGVEVDRYTFNMLIS------KCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
+ + +L MS+ G+ P ++ Y L+ G + GD IKT + +C
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD---IKTAFVVKEEMIAHKICPP 968
Query: 232 FQLTNLLILVSSDMASAEG---ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRR 285
+ ++ + A+ +L M + L P+ ++T LM K+G++ +R
Sbjct: 969 NVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRV 1028
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSG 310
+++ G L Y +I L G
Sbjct: 1029 VMSNCGLKLDLVSYNVLITGLCAKG 1053
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 132/304 (43%), Gaps = 39/304 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 132 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKSAMLASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLVKGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+D+ R+ + Q L + Y
Sbjct: 302 ------------MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 349
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG D + I KG + +++ +
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLS-VGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQ 408
Query: 439 RSAN 442
R+ +
Sbjct: 409 RNGH 412
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 318
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE +L M GL+
Sbjct: 319 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ + K GD+ +LL +
Sbjct: 379 PDIGTYTMIINEFCKKGDVWKGSKLLKE 406
>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
Length = 484
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 7/207 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L + Y D +A +++ ++PN TY + LIS YCQ+G E
Sbjct: 204 DAVTYNTLAKAYAAAGRVAELEDLIADMKNARLKPNLRTY------AILISCYCQNGMPE 257
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMA-SAEGILTMMSQAGLEPSAQTYTKL 200
++L ++ + FN L+ G+SQ ND E +L +M+ G+ P TY+ +
Sbjct: 258 RGLQLLSRLKFEGLHPDVVAFNTLLKGYSQENDQQLKLEMVLDLMAANGVRPDVTTYSTI 317
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
M ++ G D +T + ++ +F + + S AE +L MS G+
Sbjct: 318 MNWWSSAGMADKAQTILLEMQQDRVKPDVRAFAILAKGYVRSGRTHEAESLLQDMSLHGV 377
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLL 287
P+ YT ++ G+ G MD R+L
Sbjct: 378 APNVVVYTTIISGWCSMGRMDDALRVL 404
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 37/289 (12%)
Query: 90 LRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEF 149
L ++L N+ SP+ G+EP V L + + L++ +C++G +E A +++
Sbjct: 144 LVLHLLNKTRNSPSS------EDGLEP--VARPNLRTMNTLLNAWCREGRLEEAWRVVAM 195
Query: 150 MRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 209
++ +N L ++ A +A E ++ M A L+P+ +TY L+ Y ++G
Sbjct: 196 IKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIADMKNARLKPNLRTYAILISCYCQNGM 255
Query: 210 MDS-----IKTKIPSLKPQSELF--LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
+ + K L P F L + N E +L +M+ G+ P
Sbjct: 256 PERGLQLLSRLKFEGLHPDVVAFNTLLKGYSQEN------DQQLKLEMVLDLMAANGVRP 309
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TY+ +M ++ G D + +L + V D + A A+ G Y+
Sbjct: 310 DVTTYSTIMNWWSSAGMADKAQTILLEMQQDRVKPD----VRAFAILAKG-YVRSGRT-- 362
Query: 323 CFVNICFHWLEGPM--MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
H E + MS G+ P+ YT ++ G+ G MD R+L
Sbjct: 363 -------HEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDALRVL 404
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 117/296 (39%), Gaps = 36/296 (12%)
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGV-FNALIYGHSQANDMASAEGILTMMSQAG 189
I++ + + A ++L+ M ++ + V FN +I G M A ++ M Q
Sbjct: 58 IAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAMRVVQEMRQKN 117
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKI----------PSLKPQSELFLCFSFQLTNLLI 239
P+ TY L+ GY G + + + PS + E + + N L+
Sbjct: 118 CRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLRTMNTLL 177
Query: 240 ---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN 296
+ A ++ M+ AG++P A TY L YA G + + L+A ++ +
Sbjct: 178 NAWCREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIADMKNARLK 237
Query: 297 GD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
+ Y +I +G E ++ + + F GL P + L+
Sbjct: 238 PNLRTYAILISCYCQNGMPERGLQLLSRLKF---------------EGLHPDVVAFNTLL 282
Query: 354 CGYAKHGD----MDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
GY++ D ++ + L+A NG Y I++ + +G + I+ ++Q
Sbjct: 283 KGYSQENDQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQ 338
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V D+ + L + Y+ + T L + G+ PN V Y + +IS +C G
Sbjct: 342 VKPDVRAFAILAKGYVRSGRTHEAESLLQDMSLHGVAPNVVVY------TTIISGWCSMG 395
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
++ A ++LE M ++ + L++G +A
Sbjct: 396 RMDDALRVLELMLERGEAPNLNTVQTLVWGFCEA 429
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 124/299 (41%), Gaps = 25/299 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y+ L+ + + L ++ G +PN VTY L+S C+ G ++
Sbjct: 86 NVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSG------LCKMGKLK 139
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M + P V+N LI G S+ DM A + M + G P+ TY L+
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAG 259
G+++ G+ +++ + Q + F+F NLL DM A + M G
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTF--NNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
P +Y LM G G +RLL + S V D + + + + G+ +
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVS--YNILIDGYSKSGALDH 315
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSIRRLLAQNGSS 375
AI F I ++GLEP A +Y+ + +C K G + + + NGS+
Sbjct: 316 AIKLFYEI----------PKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSA 364
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 123/608 (20%), Positives = 229/608 (37%), Gaps = 130/608 (21%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ L+R Y T + L +ES G+ PN+V Y ++S+ +C++G + + K
Sbjct: 185 FGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSS------FCREGRNDDSEK 238
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMS---QAGL-EPSAQTYTKLM 201
++E MR++ FN+ I + + A I + M GL P++ TY ++
Sbjct: 239 LVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLML 298
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K G ++ KT S++ +L S+ + ++ AE +L M G+
Sbjct: 299 KGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIG 358
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
PS +Y LM G K G + + ++
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVG--------------------------------- 385
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ--NGSSLVNG 379
+M + G+ P A TY L+ GY G +D+ + LL + + L N
Sbjct: 386 --------------LMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNA 431
Query: 380 DYLDII-HALAVSGHGEYIDEIISKI-QPGVGYSADAANHIYH-LINKGQIDAAYRIVNT 436
+I+ H+L G +E++ K+ + G G N I L G++D A IV
Sbjct: 432 YTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKG 491
Query: 437 ------------------LARSANINGEQLP--------------VGGFLVRHMVKTNQP 464
L + I LP G F +
Sbjct: 492 MRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMM 551
Query: 465 GVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQ 521
G D+ + I+H +G+I +A+R++ + + + L L+ + NQ
Sbjct: 552 GEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKG--CHKSLETYNSLILGLGIKNQ 609
Query: 522 PIDKVLAVCHRLTDENLHPR--AFNLAVL-------------IKAHVLKEDYTGAVETFE 566
I ++ + + ++ + P +N A+ + +++++ V +F+
Sbjct: 610 -IFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFK 668
Query: 567 YCVNQFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDA--EVL 624
Y + F P D Q + + + SI G+ LY LM + L A ++L
Sbjct: 669 YLIGAFCKVP-------------DFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLL 715
Query: 625 RILQVAEA 632
+ ++ EA
Sbjct: 716 KATELLEA 723
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ LL A++ + ++P+ + Y I + +C+ G I
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHH------FCKQGKIS 576
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
A ++L+ M K S +N+LI G N + G++ M + G+ P+ TY
Sbjct: 577 SAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYN 633
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 130/324 (40%), Gaps = 59/324 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------ 127
YNAL+ + ++N L + G+ N VTY ++I
Sbjct: 563 YNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNML 622
Query: 128 -----------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
+ +I YC GN A +IL+ MRD E + LI G + + M
Sbjct: 623 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 682
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF-SFQLT 235
SA G+ M GL P+ TYT L+ GY K +D+ + + +K C + Q
Sbjct: 683 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG----CRPNVQTY 738
Query: 236 NLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD----MDSVRRLLA 288
N+LI ++ + AE + +M + G+ P+ TYT ++ G K+G ++ +++
Sbjct: 739 NVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIE 798
Query: 289 QSGSSLVN-GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
Q L N Y +I AL G E + + A + + GL P
Sbjct: 799 Q--GCLPNLLTYSSLIRALGQEGKVEEAENLFA---------------ELERHGLIPDEI 841
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TY K++ Y G ++ L +
Sbjct: 842 TYVKMIEAYIMSGKVEHAFNFLGR 865
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+ALL T + D ++ S+G++PN + Y + +I+ C+DGN+ A
Sbjct: 353 YSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIY------NAVINALCKDGNVADAET 406
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I++ + + + ++I GH + +D+ SA + M++ G EP+ TY+ L+ G
Sbjct: 407 IMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLC 466
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MSQAGLEP 262
G ++ I + L + T +I + DM E + M G EP
Sbjct: 467 DSGRVNEAFDLIREMILHG--ILPTAHTCTGPIIAL-CDMGCYEDAWRLFVDMKNKGCEP 523
Query: 263 SAQTYTKLMCGYAKHG 278
+ TYT L+ G G
Sbjct: 524 NVYTYTALISGLCVSG 539
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 114/299 (38%), Gaps = 38/299 (12%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E ++ D Y +++ + S ++ +G EPN VTY S LI+ C
Sbjct: 413 ESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY------STLINGLC 466
Query: 136 QDGNIEGATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM---MSQAGLE 191
G + A ++ E + P + +I DM E + M G E
Sbjct: 467 DSGRVNEAFDLIREMILHGILPTAHTCTGPII----ALCDMGCYEDAWRLFVDMKNKGCE 522
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV---SSDMASA 248
P+ TYT L+ G G +K I S + + N LI + + + A
Sbjct: 523 PNVYTYTALISGLCVSG---LLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYA 579
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHA 305
+L +M + GL + TY +++ GY GD V + Q G S Y II
Sbjct: 580 FVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKG 639
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
SG + SA+ +M G +P +YT+L+CG+ K M+S
Sbjct: 640 YCDSG-----NTTSALRIL----------DLMRDGGCKPDEWSYTELICGFCKISKMES 683
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 162/415 (39%), Gaps = 42/415 (10%)
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234
MA L M+SQ+GL Y+ L+ ++ G ++ + + + +
Sbjct: 331 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNA 390
Query: 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSG 291
+ ++A AE I+ + ++ + P TYT ++ G+ + D+DS ++ +A+ G
Sbjct: 391 VINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG 450
Query: 292 SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
Y +I+ L SG VN F + ++ G+ P+A T T
Sbjct: 451 CEPNTVTYSTLINGLCDSGR-------------VNEAFDLIREMILH--GILPTAHTCTG 495
Query: 352 LMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI-QPG 407
+ G + RL + G Y +I L VSG + + ++ + G
Sbjct: 496 PIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG 555
Query: 408 VGYSADAANHIYH-LINKGQIDAAYRIVNTLARSA---NINGEQLPVGGFLV------RH 457
V + N + + L+ +I A+ ++N + R+ NI + G+ +
Sbjct: 556 VFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAM 615
Query: 458 MVKTNQPGVGYSADAANHIYHLINKGQID-----AAYRIVNTLARSANINGEQLPVGGFL 512
+V N G+SA+ Y+ I KG D +A RI++ L R ++ L
Sbjct: 616 LVMNNMLQRGHSANLVT--YNTIIKGYCDSGNTTSALRILD-LMRDGGCKPDEWSYTE-L 671
Query: 513 VRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEY 567
+ K ++ ++ + + + D+ L P LI + E A E+
Sbjct: 672 ICGFCKISK-MESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEH 725
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 133/307 (43%), Gaps = 43/307 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q + + +S + L S M A + M GL P+ T+T L+
Sbjct: 198 RLKSAMLASGVQPDXYT-YSVLINGL--CKESKMDDANELFDEMLVKGLVPNGVTFTTLI 254
Query: 272 CGYAKHGDMDSV----RRLLAQS-GSSLVNGDYLDIIHALAVSGH----GEYIDEVSAIV 322
G+ K G +D +R+L+QS L+ Y +I+ L G + IDE
Sbjct: 255 DGHCKKGRVDLAMEIYKRMLSQSLLPDLIT--YNTLIYGLCKKGDLKQANDLIDE----- 307
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNG 379
M GL+P TYT L+ G K GD+D+ R+ + Q L +
Sbjct: 308 --------------MVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDV 353
Query: 380 DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNT 436
Y +I L G ++++ ++ VG D + I KG + R++
Sbjct: 354 AYTALISGLCQEGRSVDAEKMLREMLS-VGLKPDTGTYTMIINEFCKKGDVWKGSRLLKE 412
Query: 437 LARSANI 443
+ R+ ++
Sbjct: 413 MQRNGHV 419
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 6/178 (3%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+ PN VT+ + LI +C+ G ++ A +I + M ++ +N LIYG +
Sbjct: 241 KGLVPNGVTF------TTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCK 294
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
D+ A ++ M GL+P TYT L+ G K GD+D+ + ++ +
Sbjct: 295 KGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 354
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ + AE +L M GL+P TYT ++ + K GD+ RLL +
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKE 412
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 73/192 (38%), Gaps = 41/192 (21%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ D + ++ +G++P+++TY LI C++G+++
Sbjct: 281 DLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGC------CKEGDLD 334
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M + + + + ALI G Q AE +L M GL+P TYT ++
Sbjct: 335 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMII 394
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+ K GD+ +L M + G
Sbjct: 395 NEFCKKGDV-----------------------------------WKGSRLLKEMQRNGHV 419
Query: 262 PSAQTYTKLMCG 273
PS TY LM G
Sbjct: 420 PSVVTYNVLMNG 431
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 129/285 (45%), Gaps = 55/285 (19%)
Query: 97 EHTFS-PTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTF 155
E +FS + L K+ + + P+ Y LI + G ++ A + + M +K F
Sbjct: 501 EGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNV------GKMDEAIEYYDEMLEKGF 554
Query: 156 PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT 215
++ + LI+G+S A ++ AE +L M +GL P+ Y +++ GY K +++ + +
Sbjct: 555 QPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSS 614
Query: 216 KIPS-----LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKL 270
+ S L P + L+ L++ S M +A +L+++ + GL P + Y L
Sbjct: 615 TLKSMLEKGLMPDNRLYGIVIHNLSS-----SGHMQAAVSVLSVIEKNGLVPDSLIYGSL 669
Query: 271 MCGYAKHGDMDSVRRLL---AQSG--------SSLVNG--DYLDIIHALAVSGHGEYIDE 317
+ G+ K DM+ LL A+ G ++L++G DI HA +
Sbjct: 670 ISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNI--------- 720
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
++I+C GL P+ TYT L+ GY K GD+
Sbjct: 721 FNSIIC----------------KGLPPNCVTYTTLIDGYCKAGDI 749
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 114/265 (43%), Gaps = 22/265 (8%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+E GI P+ TY S LI YC+ ++E A K++E MR+ ++ +N LI G
Sbjct: 234 MEGAGISPDVYTY------STLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGG 287
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL-- 226
+A + A G M GL P TY ++ G K G D K + + +
Sbjct: 288 LCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPN 347
Query: 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+ +S + + ++D A I+ MS AG++P+ TY L+ G K G M R+
Sbjct: 348 VVVYSTLIDGFMRQGNAD--EAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRI 405
Query: 287 LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
L Q D + + L + GH ++ A + M + G+ P+
Sbjct: 406 LKQMTKIGYMADTM--TYNLVIEGHLRQHNKEEAFLLLNE----------MRKGGISPNV 453
Query: 347 QTYTKLMCGYAKHGDMDSIRRLLAQ 371
TY+ ++ G + G+ + LL Q
Sbjct: 454 YTYSIIINGLCQIGESERASGLLEQ 478
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 120/293 (40%), Gaps = 28/293 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN ++ +L + L ++ GI PN TY S +I+ CQ G E
Sbjct: 417 DTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTY------SIIINGLCQIGESE 470
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A+ +LE M + V+ LI G+ + + A L M++ L P Y L+
Sbjct: 471 RASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLI 530
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAG 259
G + G MD + + F F L+ ++ ++ AE +L M +G
Sbjct: 531 IGLSNVGKMDEAIEYYDEMLEKG--FQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSG 588
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEYID 316
L P+ Y +++ GY K +++ V L + G N Y +IH L+ SGH +
Sbjct: 589 LNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAV 648
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
V +++ + GL P + Y L+ G+ K DM+ LL
Sbjct: 649 SVLSVI---------------EKNGLVPDSLIYGSLISGFCKAADMEKAVGLL 686
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 152/370 (41%), Gaps = 76/370 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+ L+ ++ + + ++ + G++PN++TY LI C+ G + A++
Sbjct: 351 YSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRG------LCKLGRMGRASR 404
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
IL+ M + +N +I GH + ++ A +L M + G+ P+ TY+ ++ G
Sbjct: 405 ILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLC 464
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G+ + A G+L M GL+P+A
Sbjct: 465 QIGESE-----------------------------------RASGLLEQMIADGLKPNAF 489
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHG----EYIDEV 318
Y L+ GY + G L + + D Y +I L+ G EY DE
Sbjct: 490 VYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDE- 548
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
M + G +P+ TY L+ GY+ G+++ +LL Q +S +N
Sbjct: 549 ------------------MLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLN 590
Query: 379 GDYLDIIHALAVSGH--GEYIDEIISKIQPGVGYSADAANHIYHLI-----NKGQIDAAY 431
+ D I+A + G+ + ++++ S ++ + N +Y ++ + G + AA
Sbjct: 591 PN--DFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAV 648
Query: 432 RIVNTLARSA 441
+++ + ++
Sbjct: 649 SVLSVIEKNG 658
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 96/245 (39%), Gaps = 18/245 (7%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ Y + G + +++ M+D S N L+ +A+ + + M AG
Sbjct: 179 LVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAG 238
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+ P TY+ L+ Y K D++S K + ++ ++ + + + A
Sbjct: 239 ISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAF 298
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
G M GL P TY ++ G K G D + LL + + + + Y +I
Sbjct: 299 GYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGF 358
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G+ DE IV MS AG++P+ TY L+ G K G M
Sbjct: 359 MRQGNA---DEAFKIV------------KEMSAAGVQPNKITYDNLIRGLCKLGRMGRAS 403
Query: 367 RLLAQ 371
R+L Q
Sbjct: 404 RILKQ 408
Score = 42.7 bits (99), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 32/228 (14%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
IS YNAL+ + ++ + + +G+ PN VTY + LI YC+ G+I
Sbjct: 698 ISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTY------TTLIDGYCKAGDIRD 751
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + M + V++ L G S + D+ A I M G ++ L+
Sbjct: 752 AIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYA-IISSFNTLVH 810
Query: 203 GYAKHGDM-DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K G + +++K F + + I+ S + + E I+ + +AG
Sbjct: 811 GFCKRGKLQETVK---------------FLHVMMDKDIVPS--LLTVENIVIGLGEAGKL 853
Query: 262 PSAQT-YTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDY--LDIIHAL 306
A T + +L A H D D + L + ++N LD+IH +
Sbjct: 854 SEAHTIFVELQQKNASHRDTDHLSSLF----TDMINQGLVPLDVIHNM 897
>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 116/280 (41%), Gaps = 24/280 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN ++ + + +++ Q +P T+ +I + + G ++
Sbjct: 555 DVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHG------FARKGEMK 608
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + MR + +NALI G + M AE IL M+ AG+ P+ TYT +M
Sbjct: 609 KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIM 668
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYA GD T L+ + ++++ S M SA + MS +
Sbjct: 669 HGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIP 728
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
+ Y L+ G+A+ GD+ L+ Q V D Y I+A + +G +
Sbjct: 729 RNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGD---MQRA 785
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+ + M G++P+ +TYT L+ G+A+
Sbjct: 786 TKTI------------EEMKSVGVKPNVKTYTTLINGWAR 813
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 120/285 (42%), Gaps = 34/285 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ Y + K++ +GIE + VTY S L+S + + GN E A
Sbjct: 349 YTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTY------SILVSGFAKTGNAESADH 402
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ ++K ++ ++ +IY + Q +M AE ++ M + G++ Y +M GY
Sbjct: 403 WFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYT 462
Query: 206 KHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
GD D + K L P + C L NL + ++ A + M AG+
Sbjct: 463 MVGDEDKCLLVFERFKECGLNPSVITYGC----LINLYAKLGK-VSKALEVSKEMEHAGI 517
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
+ + +TY+ L+ G+ K D + + + D Y +II A G +
Sbjct: 518 KHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMG------K 571
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ VC V M + +P+ +T+ ++ G+A+ G+M
Sbjct: 572 MDRAVCTVK---------EMQKQRHKPTTRTFMPIIHGFARKGEM 607
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 18/235 (7%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+++ Y + G++ A + E MR + S V+ LI+ ++ DM A + M + G
Sbjct: 317 MVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 376
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+E S TY+ L+ G+AK G+ +S K + + +M AE
Sbjct: 377 IEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAE 436
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
++ M + G++ Y +M GY GD D + + +N Y +I+
Sbjct: 437 ALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLY 496
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
A G EVS M AG++ + +TY+ L+ G+ K D
Sbjct: 497 AKLGKVSKALEVS---------------KEMEHAGIKHNMKTYSMLINGFLKLKD 536
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD+ Y ALL+ + S ++ +Q I N Y LI + + G+I
Sbjct: 694 LDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDG------WARRGDI 747
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A +++ M+ + + + I S+A DM A + M G++P+ +TYT L
Sbjct: 748 WEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTL 807
Query: 201 MCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL 238
+ G+A+ + + K+ LKP ++ C +T+LL
Sbjct: 808 INGWARASLPEKALSCFEEMKLSGLKPDRAVYHCL---MTSLL 847
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 22/208 (10%)
Query: 158 SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI 217
S + ++ +++ DM A M G+EPS+ YT L+ YA DM+ + +
Sbjct: 310 SRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCV 369
Query: 218 PSLKPQSELFLCFSFQLTNLLILVS--SDMASAEGILTMMSQAGLEPS---AQTYTKLMC 272
+K + L ILVS + +AE +A + S A Y ++
Sbjct: 370 RKMKEEG-----IEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIY 424
Query: 273 GYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWL 332
Y + +MD L+ + ++ +DI H + + G+ DE ++ F
Sbjct: 425 AYCQRCNMDKAEALVREMEEEGIDAP-IDIYHTM-MDGYTMVGDEDKCLLVF-------- 474
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+ GL PS TY L+ YAK G
Sbjct: 475 --ERFKECGLNPSVITYGCLINLYAKLG 500
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
++P + YN L+ + + D + +++ +G++P+ TY + I+ +
Sbjct: 726 NIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTY------TSFINACSKA 779
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G+++ ATK +E M+ + + LI G ++A+ A M +GL+P Y
Sbjct: 780 GDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVY 839
Query: 198 TKLM 201
LM
Sbjct: 840 HCLM 843
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 26/172 (15%)
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
+PS + Y ++ Y + GDM R + + + Y ++IHA AV G ++E
Sbjct: 308 KPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAV---GRDMEE 364
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL---AQNGS 374
A+ C M + G+E S TY+ L+ G+AK G+ +S + S
Sbjct: 365 --ALSCVRK----------MKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHS 412
Query: 375 SLVNGDYLDIIHALAVSGHGEYIDEIISKI-QPGVGYSADAANHIYHLINKG 425
SL Y +II+A + + + ++ ++ + G+ DA IYH + G
Sbjct: 413 SLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGI----DAPIDIYHTMMDG 460
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 137/329 (41%), Gaps = 58/329 (17%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS----------- 126
+VP D+ Y+ ++ Y E + +L+ +G++PN+ TY +IS
Sbjct: 283 NVP-DVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEA 341
Query: 127 ------------------NSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ LIS + + GN+ K+ + M+ K + ++I+G
Sbjct: 342 EQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHG 401
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKI--PSLKPQ 223
QA + A + + M GL+P TYT L+ GY K G+M S+ ++ L P
Sbjct: 402 LCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPN 461
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ ++ + L D+A+ +L MS+ GL+P+ TY L+ G K G+++
Sbjct: 462 ---VVTYTALVDGLCKCGEVDIANE--LLHEMSEKGLQPNVCTYNALINGLCKVGNIEQA 516
Query: 284 RRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
+L+ + + D Y I+ A G E+ I M
Sbjct: 517 VKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRI---------------MLDK 561
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
GL+P+ T+ LM G+ G ++ RL+
Sbjct: 562 GLQPTIVTFNVLMNGFCMSGMLEDGERLI 590
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 134/302 (44%), Gaps = 30/302 (9%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E+ V + YN +L + L ++E +G P+ V+Y S ++ YC
Sbjct: 245 EVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSY------SVIVDGYC 298
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
Q + K++E ++ K ++ +N++I + + AE +L +M + P
Sbjct: 299 QVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNV 358
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL---FLCFSFQLTNLLILVSSDMASAEGIL 252
YT L+ G+ K G++ S++ K+ + ++ F+ ++ + L + + A +
Sbjct: 359 VYTTLISGFGKSGNV-SVEYKLFDEMKRKKIVPDFVTYTSMIHGLC--QAGKVVEARKLF 415
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+ M GL+P TYT L+ GY K G+M S+ + + G + Y ++ L
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G + +E+ H MS+ GL+P+ TY L+ G K G+++ +L+
Sbjct: 476 GEVDIANEL----------LH-----EMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLM 520
Query: 370 AQ 371
+
Sbjct: 521 EE 522
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 87/211 (41%), Gaps = 12/211 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YNAL+ + + +++ G P+ +TY + ++ YC+ G +
Sbjct: 496 NVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY------TTIMDAYCKMGEMA 549
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M DK + FN L+ G + + E ++ M G+ P+A T+ LM
Sbjct: 550 KAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLM 609
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQA 258
Y +M + + Q + N+LI + +M A + M +
Sbjct: 610 KQYCIRNNMRATIEIYKGMHAQG---VVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEK 666
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
G +A +Y L+ G+ K + R+L +
Sbjct: 667 GFSLTAASYNSLIKGFYKRKKFEEARKLFEE 697
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 135/335 (40%), Gaps = 59/335 (17%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS------ 126
H E+ P D+ Y ++ Y + L ++ ++G+E N Y +I+
Sbjct: 277 HFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKG 336
Query: 127 -----------------------NSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ +IS +C G++ A ++ E M+ +
Sbjct: 337 QVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHT 396
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
ALI G +A ++ A+ +L M GL+ TYT L+ GY K G+M + + +
Sbjct: 397 ALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNM------VEAFRVH 450
Query: 224 SELF------LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
+E+ ++ + + D+ +A +L M GLE + TY L+ G K
Sbjct: 451 NEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKF 510
Query: 278 GDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
G+++ R++ + ++ D Y +I L SG + H +
Sbjct: 511 GNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRA--------------HNMLQ 556
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
M+ + G++PS TY LM G+ G ++ ++LL
Sbjct: 557 EMLDK-GIKPSIATYNVLMNGFCMSGRVEGGKKLL 590
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E +V ++ YN+L++ Y +++ S T+ + SQ + PN TY LI +C
Sbjct: 595 EKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKG------HC 648
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ N++ A + M +K ++ ++ALI ++ + A M GL
Sbjct: 649 KARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPD 708
Query: 196 TYTKLM 201
Y+ M
Sbjct: 709 VYSFYM 714
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 142/361 (39%), Gaps = 62/361 (17%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ L+R Y + L ++ + GI PN V Y LIS+ +C++G A K
Sbjct: 185 FGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISS------FCKEGKTHDAEK 238
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM---SQAGL-EPSAQTYTKLM 201
+++ MR+ FN+ I + + A I M + GL P+ TY ++
Sbjct: 239 LVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLML 298
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K G ++ KT + ++K + S+ + L ++ + + A +L M G+E
Sbjct: 299 MGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIE 358
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P +Y +M G K+G + R L+
Sbjct: 359 PDIYSYNIVMDGLCKNGMLSDARMLMG--------------------------------- 385
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDY 381
+M + G+ P TY+ L+ GY G + LL + S+ + +
Sbjct: 386 --------------LMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNT 431
Query: 382 LD---IIHALAVSGHGEYIDEIISKI-QPGVGYSADAANHIYH-LINKGQIDAAYRIVNT 436
++H+L G + ++ K+ + G G N I + L N GQ+D A IVN
Sbjct: 432 YTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNG 491
Query: 437 L 437
+
Sbjct: 492 M 492
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 89/424 (20%), Positives = 156/424 (36%), Gaps = 95/424 (22%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N L+ + D+ H + K+ ++G EPN T+ L+ YC+ G +
Sbjct: 150 FNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTF------GILVRGYCRAGLASKGLE 203
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK---LMC 202
+L MR + ++N LI + AE ++ M + GL P +T+ +C
Sbjct: 204 LLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALC 263
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL-E 261
G K + S +F DM E + GL
Sbjct: 264 GSGK-------------ILEASRIF---------------RDMQIDE-------ELGLPH 288
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL--AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
P+ TY ++ G+ K G ++ + L+ + ++ +N + +I L + +G+ ++
Sbjct: 289 PNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNI-WLLGLIRNGKLLEA-- 345
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSSL 376
W+ M G+EP +Y +M G K+G + R L+ +NG
Sbjct: 346 -----------WIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILP 394
Query: 377 VNGDYLDIIHALAVSGH----GEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYR 432
Y ++H G + E+IS Y+ + H L +G+I A
Sbjct: 395 DTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLH--SLWKEGRISEAEN 452
Query: 433 IVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYH-LINKGQIDAAYRI 491
++ K N+ G G N I + L N GQ+D A I
Sbjct: 453 LLQ------------------------KMNEKGYGVDTVTCNIIINALCNNGQLDKAIEI 488
Query: 492 VNTL 495
VN +
Sbjct: 489 VNGM 492
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 107/311 (34%), Gaps = 51/311 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y+ LL Y F + L ++ S PN T L+ + ++G I
Sbjct: 395 DTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHS------LWKEGRIS 448
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG------------ 189
A +L+ M +K + + N +I + A I+ M G
Sbjct: 449 EAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFI 508
Query: 190 -----------LEPSAQTYTKLMCGYAKHGDMDSIKTKI-----PSLKPQSELFLCFSFQ 233
P TY+ ++ G K G +D K K L+P S ++ F
Sbjct: 509 GLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHS 568
Query: 234 LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293
++SA +L M + G + QTY L+ G + + L+ +
Sbjct: 569 FCR-----EGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREK 623
Query: 294 LVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
V+ D H L G I++ +++ M Q G+ P+ ++ L+
Sbjct: 624 GVSPDVCTYNHMLNCLCEGGRINDAPSVL------------DEMLQKGISPNISSFRILI 671
Query: 354 CGYAKHGDMDS 364
+ K D +
Sbjct: 672 KAFCKACDFKA 682
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 137/341 (40%), Gaps = 66/341 (19%)
Query: 35 LGAFLVLLVLLFVYLNSKWCSEPSLGPGNL-PCEDPFSVHTGELDVPLDISHYNALLRVY 93
L A L V +F L +K+C E GN+ + F T P +S +N L+ Y
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKE-----GNICDAQKVFDEITKRSLRPTVVS-FNTLINGY 285
Query: 94 LDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDK 153
+ +E P+ TY S LI+ C++ ++GA ++ M ++
Sbjct: 286 CKVGNLDVGFRLKHHMEKSRTRPDVFTY------SALINALCKENKMDGAHRLFYEMCER 339
Query: 154 TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 213
++ +F LI+GHS+ + + M GL+P Y L+ G+ K+G
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNG----- 394
Query: 214 KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCG 273
D+ +A I+ M + GL P TYT L+ G
Sbjct: 395 ------------------------------DLVAARNIVDGMIRRGLRPDKVTYTTLIDG 424
Query: 274 YAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFH 330
+ + GD+D+ +R+ + Q+G L + +I + G ID A+
Sbjct: 425 FCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMC--KEGRVIDAERAL--------- 473
Query: 331 WLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M +AG++P TYT +M + K GD + +LL +
Sbjct: 474 ----REMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 10/200 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN L+ + N + + + + +G+ P++VTY + LI +C+ G+++
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTY------TTLIDGFCRGGDVD 432
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M + F+ALI G + + AE L M +AG++P TYT +M
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMM 492
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSEL--FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
+ K GD + + ++ + + ++ L L L M +A+ +L M G
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKL--GQMKNADMLLDAMLNVG 550
Query: 260 LEPSAQTYTKLMCGYAKHGD 279
+ P TY L+ G+ +H +
Sbjct: 551 VVPDDITYNTLLEGHHRHAN 570
>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
lyrata]
Length = 1202
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 141/334 (42%), Gaps = 39/334 (11%)
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
LI+ + LI YC+DGN E + K+ E M+ S FN L+ G +A + AE +LT
Sbjct: 622 LITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLT 681
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDS----IKTKIPS-LKPQSELFLCFSFQLTNLL 238
M G P A T++ L GY+ + D+ +T + S LK + + C S L L
Sbjct: 682 EMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNA--YTC-SILLNAL- 737
Query: 239 ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD 298
+ AE IL GL P+ Y ++ GY++ GD+ R + + D
Sbjct: 738 -CKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPD 796
Query: 299 YLD---IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCG 355
+L +I G E ++ E M G+ PS +TY L+ G
Sbjct: 797 HLAYNCLIRTFCELGDMENAEQ---------------EVNKMKLKGVSPSVETYNILIGG 841
Query: 356 YAKHGDMDSIRRLLAQ---NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSA 412
Y + + D LL + NG+ Y +I+ L G +I+ + G S
Sbjct: 842 YGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLC-KGSKLLEAQIVKRDMEDRGVSP 900
Query: 413 DAANHIYHLI-----NKGQIDAAYRIVNTLARSA 441
+ IY+++ +KG+I+ A+R + +
Sbjct: 901 NV--RIYNMLIDGCCSKGKIEDAFRFSEEMFKKG 932
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 84/189 (44%), Gaps = 26/189 (13%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+E +G+ PN Y LI C G IE A + E M K ++ +N LI G
Sbjct: 893 MEDRGVSPNVRIYNMLIDGC------CSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDG 946
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQ 223
S +A AE +L +S+ GL+P TY L+ GY G++ + K +KP
Sbjct: 947 LSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKP- 1005
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGI-LT--MMSQAGLEPSAQTYTKLMCGYAKHGDM 280
+ + +LLI + + EGI LT + + L+P Y ++ YA HGDM
Sbjct: 1006 -------TLKTYHLLI----SLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDM 1054
Query: 281 DSVRRLLAQ 289
D L Q
Sbjct: 1055 DKAFNLQKQ 1063
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 133/355 (37%), Gaps = 76/355 (21%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ Y + + ++++ IEP+ +T+ L+ + G +E A
Sbjct: 625 YNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKG------LFKAGMVEDAEN 678
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMA----------------------------- 176
+L M+D+ F F+ L G+S +ND A
Sbjct: 679 VLTEMKDQGFVPDAFTFSILFDGYS-SNDKADAALGVYETAVDSGLKMNAYTCSILLNAL 737
Query: 177 -------SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS-----LKPQS 224
AE IL GL P+ Y ++ GY++ GD+ + KI + +KP
Sbjct: 738 CKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDH 797
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ C L DM +AE + M G+ PS +TY L+ GY + + D
Sbjct: 798 LAYNCLIRTFCEL-----GDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 852
Query: 285 RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM----MSQA 340
LL + NG +++ +G I+ C LE + M
Sbjct: 853 DLLKEMED---NGTMPNVV------SYGTLIN------CLCKGS-KLLEAQIVKRDMEDR 896
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSG 392
G+ P+ + Y L+ G G ++ R + + G L Y +I L+++G
Sbjct: 897 GVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNG 951
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 181/449 (40%), Gaps = 67/449 (14%)
Query: 94 LDNEHTFSPTDFLAKLESQGIEPN--RVT---YQQLISNSKLISKYCQDGNIEGATKILE 148
L NE F +D L L ++ RVT + ++ + SK+ I+ A K+ +
Sbjct: 508 LRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSD 567
Query: 149 -------FMRDKTFPISEGVF--NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
F R K IS VF N LI G + M AE + M L PS TY
Sbjct: 568 VGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNT 627
Query: 200 LMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
L+ GY K G+ + + K +++P + F+ L L + + AE +LT
Sbjct: 628 LIDGYCKDGNPEKSFKVRERMKADNIEPS---LITFNTLLKGL--FKAGMVEDAENVLTE 682
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
M G P A T++ L GY+ + D+ V SG + +++AL G
Sbjct: 683 MKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQ 742
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
E +E+ G M++ GL P+ Y ++ GY++ GD+ R +
Sbjct: 743 IEKAEEIL--------------GREMAK-GLVPNEVLYNTMIDGYSRKGDLVGARMKIDA 787
Query: 372 NGSSLVNGDYLD---IIHALAVSGHGEYIDEIISKIQ-PGVGYSADAAN-HIYHLINKGQ 426
+ D+L +I G E ++ ++K++ GV S + N I K +
Sbjct: 788 MEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYE 847
Query: 427 IDAAYRIV----------NTLARSANINGEQLPVGGFLVR-HMVKTNQPGVGYSADAANH 475
D + ++ N ++ IN L G L+ +VK + G S +
Sbjct: 848 FDKCFDLLKEMEDNGTMPNVVSYGTLINC--LCKGSKLLEAQIVKRDMEDRGVSPNV--R 903
Query: 476 IYHLI-----NKGQIDAAYRIVNTLARSA 499
IY+++ +KG+I+ A+R + +
Sbjct: 904 IYNMLIDGCCSKGKIEDAFRFSEEMFKKG 932
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 102/289 (35%), Gaps = 57/289 (19%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ YN L+ Y D L ++E G PN V+Y LI+ C+ +
Sbjct: 832 VETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSY------GTLINCLCKGSKLLE 885
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + M D+ + ++N LI G + A M + G+E + TY L+
Sbjct: 886 AQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLID 945
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
G + +G +A AE +L +S+ GL+P
Sbjct: 946 GLSMNG-----------------------------------KLAEAEDMLLEISRKGLKP 970
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TY L+ GY G++ L + +S + L H L E I+
Sbjct: 971 DVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPT-LKTYHLLISLCTKEGIE------ 1023
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
L + + L+P Y ++ YA HGDMD L Q
Sbjct: 1024 ---------LTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQ 1063
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 24/217 (11%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK 129
FS + + L++ YN L+ N D L ++ +G++P+ TY LIS +
Sbjct: 924 FSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYR 983
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI-LT--MMS 186
GN++ + E M+ + ++ LI + + EGI LT +
Sbjct: 984 FA------GNVQRCIALYEEMKTSGIKPTLKTYHLLI-------SLCTKEGIELTKKIFG 1030
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS-ELFLCFSFQLTNLLILVS--- 242
+ L+P Y ++ YA HGDMD K +L+ Q E + N LIL
Sbjct: 1031 EMSLQPDLLVYNGVLHCYAVHGDMD----KAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 1086
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
+ ++ M +EP A TY ++ G+ + D
Sbjct: 1087 GKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKD 1123
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 32/288 (11%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G EP+ + L+ C+ G+++ A K+ E MR + FP++ F +L+YG +
Sbjct: 213 GFEPDEYVF------GCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRV 265
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM----DSIK-TKIPSLKPQSELF 227
M A+ +L M++AG EP YT L+ GYA G M D ++ + +P +
Sbjct: 266 GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNAN-- 323
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
C++ + L + M A + M + E TYT L+ G+ K G +D +L
Sbjct: 324 -CYTVLIQALCKV--DRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVL 380
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
+ L +H + E +E C +E M Q P
Sbjct: 381 DDMIKKGLMPSELTYMHIMVAHEKKESFEE----------CLELMEK--MRQIEYHPDIG 428
Query: 348 TYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSG 392
Y ++ K G++ RL + +NG S ++ +I+ LA G
Sbjct: 429 IYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 147/378 (38%), Gaps = 57/378 (15%)
Query: 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISE-GVFNALIYGHSQANDMASAEGILTM 184
S K++SK Q G + G ++E MR + + E +F L+ + A+ + A +L
Sbjct: 152 SMVKILSKMRQFGAVWG---LIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDE 208
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL-TNLLILVS- 242
M + G EP + L+ KHG S+K ++LF + NL S
Sbjct: 209 MPKFGFEPDEYVFGCLLDALCKHG----------SVKDAAKLFEDMRMRFPVNLRYFTSL 258
Query: 243 -------SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGS 292
M A+ +L M++AG EP YT L+ GYA G M LL + G
Sbjct: 259 LYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGF 318
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
Y +I AL E A+ FV M + E TYT L
Sbjct: 319 EPNANCYTVLIQALCKVDRME-----EAMKVFVE----------MERYECEADVVTYTAL 363
Query: 353 MCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQP--GVGY 410
+ G+ K G +D +L + L +H + E +E + ++ + Y
Sbjct: 364 VSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEY 423
Query: 411 SADAANHIYHLINK-----GQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG 465
D IY+++ + G++ A R+ N + NG V F++ +
Sbjct: 424 HPDIG--IYNVVIRLACKLGEVKEAVRLWNEMEE----NGLSPGVDTFVI---MINGLAS 474
Query: 466 VGYSADAANHIYHLINKG 483
G +A++H ++ +G
Sbjct: 475 QGCLLEASDHFKEMVTRG 492
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 81/210 (38%), Gaps = 12/210 (5%)
Query: 72 VHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLI 131
V E DI Y LL Y + D L + +G EPN Y + LI
Sbjct: 276 VQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCY------TVLI 329
Query: 132 SKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
C+ +E A K+ M + AL+ G + + +L M + GL
Sbjct: 330 QALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLM 389
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
PS TY +M + K +S + + ++ ++ + N++I ++ + +
Sbjct: 390 PSELTYMHIMVAHEKK---ESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEA 446
Query: 252 LTM---MSQAGLEPSAQTYTKLMCGYAKHG 278
+ + M + GL P T+ ++ G A G
Sbjct: 447 VRLWNEMEENGLSPGVDTFVIMINGLASQG 476
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 22/285 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+R H L + G PN VTY + L++ + + G ++
Sbjct: 189 NVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTY------NTLVAAFFRAGEVD 242
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA +++ MR+ + FN+++ G +A M A + M + GL P +Y L+
Sbjct: 243 GAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLV 302
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K G + + + + +F ++ + ++ A ++ M + GL+
Sbjct: 303 GGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQ 362
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY--IDEVS 319
+ T+T L+ G+ K G +D LLA G + + ++G+ +DE
Sbjct: 363 MNEVTFTALIDGFCKKGFLDDA--LLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEAR 420
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
++ H +E GL+P TY+ ++ Y K+ D S
Sbjct: 421 ELL-------HEMEA-----KGLKPDVVTYSTIISAYCKNCDTHS 453
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 110/282 (39%), Gaps = 59/282 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ Y + A++ +GI P+ VT+ + LI C+ GN+E A
Sbjct: 298 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTF------TSLIHVMCKAGNLERAVT 351
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
++ MR++ ++E F ALI G + + A + M Q ++PS Y L+ GY
Sbjct: 352 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYC 411
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
G MD A +L M GL+P
Sbjct: 412 MVGRMD-----------------------------------EARELLHEMEAKGLKPDVV 436
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIV 322
TY+ ++ Y K+ D S L Q V D Y +I L G D A V
Sbjct: 437 TYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLC--GEKRLSD---AHV 491
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
F N M + GL+P TYT L+ G+ K G+++S
Sbjct: 492 LFKN----------MIKLGLQPDEFTYTSLIDGHCKEGNVES 523
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK---------LIS 132
D+ Y+ L+ + L KL + P Y L+ + L+
Sbjct: 539 DVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLK 598
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C G + A K+ + M D+ + + V++ LI+GH +A ++ A M Q G P
Sbjct: 599 GFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAP 658
Query: 193 SAQTYTKLMCGYAKHG 208
++ + L+ G ++G
Sbjct: 659 NSTSTISLIRGLFENG 674
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 77.4 bits (189), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 155/375 (41%), Gaps = 29/375 (7%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H + V LD+ Y+ ++ + L + +G++P+ VTY +I
Sbjct: 224 HMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDG----- 278
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
C+ ++ A +L+ M DK +N +I G +A + A+G+L M ++P
Sbjct: 279 -LCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKP 337
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
QTY L+ GY G+ + ++ + + ++ L + + A I
Sbjct: 338 DIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIF 397
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
M + G++P+ Y L+ GYA G D+ + L+ +G S N + ++ A A
Sbjct: 398 YCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKK 457
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
IDE I MSQ GL P TY L+ K G +D
Sbjct: 458 A---MIDEAMHIF------------SRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKF 502
Query: 370 AQ---NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI-QPGVGYSADAANHIY-HLINK 424
Q +G + + + +++ L E +E+ ++ GV + N I +L N+
Sbjct: 503 NQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNE 562
Query: 425 GQIDAAYRIVNTLAR 439
GQ+ A R+++++ R
Sbjct: 563 GQVMVAQRLIDSMER 577
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 173/433 (39%), Gaps = 42/433 (9%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQG---IEPNRVTYQQLISNSKLISKYCQDGNIEGA 143
N LL+ + + + L + G PN VTY +I C+ ++ A
Sbjct: 165 NTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDG------LCKAQAVDRA 218
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+L+ M DK + ++ +I G +A + AEG+L M G++P TY ++ G
Sbjct: 219 EGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDG 278
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
K +D + + + + ++ + + + A+G+L M ++P
Sbjct: 279 LCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPD 338
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA-VSGHGEYIDEVSAIV 322
QTY L+ GY G+ V R L + + ++ D + L + +G+ +
Sbjct: 339 IQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFY 398
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSSLVNG 379
C M + G++P+ Y L+ GYA G D+ + L+ NG S N
Sbjct: 399 C-------------MIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNY 445
Query: 380 DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAY----R 432
+ ++ A A + I S++ G S D + I L G++D A +
Sbjct: 446 IFNIVLCAYAKKAMIDEAMHIFSRMSQH-GLSPDVVTYGILIDALCKLGRVDDAVLKFNQ 504
Query: 433 IVNTLARSANINGEQLPVGGFLVRHMVKTNQ-------PGVGYSADAANHIY-HLINKGQ 484
++N ++ L G V K + GV + N I +L N+GQ
Sbjct: 505 MINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQ 564
Query: 485 IDAAYRIVNTLAR 497
+ A R+++++ R
Sbjct: 565 VMVAQRLIDSMER 577
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ ++ QG+ PN V + ++ N C +G + A ++++ M + +N
Sbjct: 535 ELFFEMWDQGVRPNVVFFNTIMCN------LCNEGQVMVAQRLIDSMERVGVRPNVISYN 588
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 212
LI GH A A +L +M GL+P +Y L+ GY K G +D+
Sbjct: 589 TLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDN 637
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 112/238 (47%), Gaps = 18/238 (7%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S LI + ++G+I+ +I + M PI+ +N LI+G + M A IL M
Sbjct: 337 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT 396
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
G +P+++T+ L+ GY + +M + ++ ++ + S+ + D++
Sbjct: 397 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSL 456
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIH 304
A +L M+ +GL+P+ Y+ L+ YA G ++ RRLL S V D Y II
Sbjct: 457 ANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIIS 516
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
L+ +G ++E S + LE + GL+P A T+ + GY+K G M
Sbjct: 517 CLSKAGK---MEEAST---------YLLE---IQGRGLKPDAVTFGAFILGYSKTGKM 559
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 149/367 (40%), Gaps = 58/367 (15%)
Query: 70 FSVHTGELDVPL--DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
+ V+ G LD + D+ Y L+ L +++ +G+ PN Y
Sbjct: 213 WKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIY------ 266
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S +I CQ G+I+ A ++ M +K + + + G +A M A+ M +
Sbjct: 267 SLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQK 326
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC-FSFQLTNLLILVS---- 242
GL+P + L+ G+ + GD+D + L+ + + C L +L+
Sbjct: 327 TGLKPDYNACSALIDGFMREGDIDEV------LRIKDVMVSCGIPINLITYNVLIHGLCK 380
Query: 243 -SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL-----------AQS 290
M A IL M G +P+++T+ L+ GY + +M LL A S
Sbjct: 381 FGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 440
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYT 350
+++NG + H +S + +++ M+ +GL+P+ Y+
Sbjct: 441 YGAMING----LCHCKDLSLANKLLEK-------------------MTFSGLKPNVVVYS 477
Query: 351 KLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPG 407
L+ YA G ++ RRLL S V D Y II L+ +G E + +IQ G
Sbjct: 478 ILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ-G 536
Query: 408 VGYSADA 414
G DA
Sbjct: 537 RGLKPDA 543
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 129/311 (41%), Gaps = 35/311 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P+++ YN L+ + L + + G +PN T+ LI YC++
Sbjct: 364 IPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTF------CLLIEGYCREH 417
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A ++L+ M + S + A+I G D++ A +L M+ +GL+P+ Y+
Sbjct: 418 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 477
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ YA G ++ + + + F + + + M A L +
Sbjct: 478 ILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 537
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS-GSSLVNGDYLDIIHALAVSGHGEYIDE 317
GL+P A T+ + GY+K G M + + L+ + L + + ++GH + +
Sbjct: 538 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL---YTVLINGHFKAGNL 594
Query: 318 VSAIVCF-----------VNICFHWLEGPM--------------MSQAGLEPSAQTYTKL 352
+ A+ F V C ++ G + + + GL P TY+ L
Sbjct: 595 MEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSL 654
Query: 353 MCGYAKHGDMD 363
+ G+ K G+++
Sbjct: 655 ISGFCKQGEVE 665
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L V D+ +A + L N ++L+ +G+ P+ TY S LIS +C+
Sbjct: 607 LGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY------SSLISGFCK 660
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G +E A ++ + M K + ++NAL+ G ++ D+ A + M + GLEP + T
Sbjct: 661 QGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 720
Query: 197 YTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEG 250
Y+ ++ GY K ++ S+ ++PS Q F + N L+ DM A
Sbjct: 721 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSF------VYNALVHGCCKEGDMEKAMN 774
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
+ M Q G + ++ L+ GY K + +L + + + D++ +
Sbjct: 775 LFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHC 833
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
++E N+ F M + L TYT LM GY K G + L
Sbjct: 834 KAGKMEE-------ANLLFKE-----MQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFE 881
Query: 371 QNGSSLVNGDYLDIIHALAVSGH 393
+ + V D ++ + L + H
Sbjct: 882 KMVAKGVKPD--EVTYGLVIYAH 902
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 105/251 (41%), Gaps = 18/251 (7%)
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
LI + L+ + G +E K+ M D + L+ + D+ A+ +L
Sbjct: 193 LIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLI 252
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
M + GL P+ Y+ ++ G + GD+D S+ + + +++ + + +
Sbjct: 253 EMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAK 312
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYL 300
M A+ M + GL+P + L+ G+ + GD+D V R+ + G + Y
Sbjct: 313 RMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYN 372
Query: 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+IH L G E E+ L+G M G +P+++T+ L+ GY +
Sbjct: 373 VLIHGLCKFGKMEKAAEI-------------LKG--MVTLGCKPNSRTFCLLIEGYCREH 417
Query: 361 DMDSIRRLLAQ 371
+M LL +
Sbjct: 418 NMGRALELLDE 428
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N L+ Y + + ++ ++ I P+ VTY + +I +C+ G +E A
Sbjct: 790 FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY------TTVIDWHCKAGKMEEANL 843
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M+++ + + +L+YG+++ + + M G++P TY ++ +
Sbjct: 844 LFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHC 903
Query: 206 KHGDMDSIKTKIPSLKPQSELF---LCFSFQLTNLLILV---SSDMASAEGILTMMSQAG 259
K ++ + + K + E+ + + +LLI D+ A +L M + G
Sbjct: 904 KEDNL------VEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 957
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
L+PS L+ + + G MD R+
Sbjct: 958 LKPSLAACNTLVRSFHEAGKMDEATRVF 985
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 119/294 (40%), Gaps = 31/294 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y+ ++ Y +E+ ++ S+G++P+ Y L+ C++G++E
Sbjct: 717 DSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC------CKEGDME 770
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M K F + FN LI G+ ++ + A + M + P TYT ++
Sbjct: 771 KAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 829
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE--GILTMMSQAG 259
+ K G M+ ++ ++ + ++ T+L+ + S+E + M G
Sbjct: 830 DWHCKAGKMEEANLLFKEMQERNLIVDTVTY--TSLMYGYNKLGQSSEVFALFEKMVAKG 887
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ--SGSSLVNGDYLDIIHALAVSG--HGEYI 315
++P TY ++ + K ++ +L + L G IH L ++ E +
Sbjct: 888 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG----TIHDLLITALCKREDL 943
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
E S ++ M + GL+PS L+ + + G MD R+
Sbjct: 944 TEASKLL------------DEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVF 985
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 130/306 (42%), Gaps = 41/306 (13%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS ++ LM GY + GD+D
Sbjct: 121 YPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 180
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 181 RLKSAMHASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLDKGLVPNGVTFTTLI 237
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 238 DGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDE------- 290
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+++ R+ + Q L + Y
Sbjct: 291 ------------MSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAY 338
Query: 382 LDIIHALAVSGHGEYID-EIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
+I L G Y+D E + + G D + I KG + +++ +
Sbjct: 339 TALISGLC--QEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 396
Query: 438 ARSANI 443
R ++
Sbjct: 397 QRDGHV 402
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C+ G ++
Sbjct: 194 DVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF------TTLIDGHCKSGRVD 247
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 307
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+++ + ++ ++ + AE +L M AGL+
Sbjct: 308 DGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLK 367
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ + K GD+ + +LL +
Sbjct: 368 PDTGTYTMIINEFCKKGDVWTGSKLLKE 395
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 75/192 (39%), Gaps = 41/192 (21%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ D + ++ +G++P+++TY LI C++G++E
Sbjct: 264 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGC------CKEGDLE 317
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M + + + + ALI G Q AE +L M AGL+P TYT ++
Sbjct: 318 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMII 377
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+ K GD+ + +L M + G
Sbjct: 378 NEFCKKGDV-----------------------------------WTGSKLLKEMQRDGHV 402
Query: 262 PSAQTYTKLMCG 273
PS TY LM G
Sbjct: 403 PSVVTYNVLMNG 414
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 152/365 (41%), Gaps = 43/365 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ ++ + + + + L +++ + I PN TY LI C+ G E
Sbjct: 202 DVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDG------LCKLGQWE 255
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+L M + + F+ LI G + + A+ ++ M + G+EP TY+ +M
Sbjct: 256 KVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIM 315
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY G +D + L+ + FS+ + ++A A + +SQ GL+
Sbjct: 316 DGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLK 375
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI-IHALAVSGHGEYIDEVSA 320
P TY+ ++ G + G + +++ + L G DI +H+ + G+ +Y A
Sbjct: 376 PDTVTYSTILHGLIEVGRIGDAKKIFDE---MLRVGPTPDICLHSTLLFGYFKYGLVEEA 432
Query: 321 IVCF---------VNICFHWL------EGPMMSQA----------GLEPSAQTYTKLMCG 355
++ F NI F+ + + + +A GL P +TY ++ G
Sbjct: 433 MLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITG 492
Query: 356 YAKHGDMDSIR---RLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIIS--KIQPGVGY 410
+ + G D ++ R + NG N Y I+ S I EI+S K G G+
Sbjct: 493 FCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNK---ISEIVSFMKEMAGRGF 549
Query: 411 SADAA 415
S DA
Sbjct: 550 SFDAT 554
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 142/335 (42%), Gaps = 36/335 (10%)
Query: 69 PFSVHTGELDVPLDISHYNALLR-VYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
P + TG +P ++ +N LL ++ +N+ T + F + + EPN V Y +++
Sbjct: 121 PIYLKTG---IPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNG 177
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+ G+ E +L M ++ +I + ++ +A +L M Q
Sbjct: 178 ------LSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQ 231
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIP-----SLKPQSELFLCFSFQLTNLLILVS 242
+ P+ TY L+ G K G + +KT + ++ P FS + L
Sbjct: 232 KNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVH---TFSILIDGL--CKE 286
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI 302
+ A+ ++ M + G+EP TY+ +M GY G +D RR+ + +
Sbjct: 287 GKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFS- 345
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+++ ++G+ + + A+ F I SQ GL+P TY+ ++ G + G +
Sbjct: 346 -YSILINGYCKKKNLAKAMQLFGEI----------SQKGLKPDTVTYSTILHGLIEVGRI 394
Query: 363 DSIRRLLAQNGSSLVNGDYLDI-IHALAVSGHGEY 396
+++ + L G DI +H+ + G+ +Y
Sbjct: 395 GDAKKIFDE---MLRVGPTPDICLHSTLLFGYFKY 426
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 150/370 (40%), Gaps = 44/370 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
++ L + ++ +H + ++ GI P + +++NS YC I+ A
Sbjct: 65 FSKLFKTMINMKHYSAVVSLFREMRILGI-PISDSILNIVTNS-----YCLRHRIDCAFS 118
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL-EPSAQTYTKLMCGY 204
+L P + FN L+ G N + A + + + + EP+ Y +M G
Sbjct: 119 VLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGL 178
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
+K G + + + ++ + ++ + + ++ +A +L M Q + P+
Sbjct: 179 SKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNI 238
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAI 321
TY L+ G K G + V+ LL++ + +N + + +I L G E DEV
Sbjct: 239 FTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMR- 297
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR---LLAQNG----- 373
H +E G+EP TY+ +M GY G +D RR +L G
Sbjct: 298 --------HMIE------KGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNI 343
Query: 374 ---SSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH-LINKGQIDA 429
S L+NG A A+ GE IS Q G+ + I H LI G+I
Sbjct: 344 FSYSILINGYCKKKNLAKAMQLFGE-----IS--QKGLKPDTVTYSTILHGLIEVGRIGD 396
Query: 430 AYRIVNTLAR 439
A +I + + R
Sbjct: 397 AKKIFDEMLR 406
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 131/305 (42%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L + M A + M L P+ T+T L+
Sbjct: 198 RLKSAMLASGVQPDVYT-YSVLINGL--CKENKMDDANKLFDEMLVKALVPNGVTFTTLI 254
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I+ L G + IDE
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDE------- 307
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+D+ R+ + Q L + Y
Sbjct: 308 ------------MSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 355
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG DA + I KG + +++ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLS-VGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 439 RSANI 443
R ++
Sbjct: 415 RDGHV 419
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ ++ + + PN VT+ + LI +C++G ++
Sbjct: 211 DVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTF------TTLIDGHCKNGRVD 264
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLI 324
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE +L M GL+
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P A+TYT ++ + K GD+ +LL +
Sbjct: 385 PDARTYTMIINEFCKKGDVWKGSKLLKE 412
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 111/280 (39%), Gaps = 53/280 (18%)
Query: 130 LISKYCQDGNIEGATKIL-----------------------------EFMRDKTFPISEG 160
L+ ++C+DG+I A + E R K+ ++ G
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207
Query: 161 V------FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
V ++ LI G + N M A + M L P+ T+T L+ G+ K+G +D
Sbjct: 208 VQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAM 267
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+ QS L ++ + D+ A ++ MS GL+P TYT L+ G
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGC 327
Query: 275 AKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
K GD+D+ R+ + Q L + Y +I L G +D +
Sbjct: 328 CKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS--VDAEKML---------- 375
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M GL+P A+TYT ++ + K GD+ +LL +
Sbjct: 376 ---REMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 412
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 75/192 (39%), Gaps = 41/192 (21%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ D + ++ +G++P+++TY LI C++G+++
Sbjct: 281 DLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGC------CKEGDLD 334
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M + + + + ALI G Q AE +L M GL+P A+TYT ++
Sbjct: 335 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 394
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+ K GD+ +L M + G
Sbjct: 395 NEFCKKGDV-----------------------------------WKGSKLLKEMQRDGHV 419
Query: 262 PSAQTYTKLMCG 273
PS TY LM G
Sbjct: 420 PSVVTYNVLMNG 431
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ D ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTF------TTLIDGHCKNGKVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M + F +N LIYG + D+ A+ +L M GL+P TYT L+
Sbjct: 259 SAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+DS ++ +S ++ + AE +L M GL+
Sbjct: 319 DGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLK 378
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ + K D+ + +LL +
Sbjct: 379 PDNGTYTMIINEFCKKEDVKTAAKLLKE 406
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 119/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ K+ M ++ LI G + + M A + M GL P+
Sbjct: 183 RLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +DS + Q L ++ + D+ A+ +L M
Sbjct: 243 TFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
GL+P TYT L+ G K GD+DS +R + + L + Y +I L G
Sbjct: 303 RMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRA 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+++ M GL+P TYT ++ + K D+ + +LL +
Sbjct: 363 TDAEKMLR---------------EMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKE 406
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ D L ++ +G++P+++TY LI + C++G+++
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGN------CKEGDLD 328
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ E M ++ + + + ALI G Q AE +L M GL+P TYT ++
Sbjct: 329 SAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMII 388
Query: 202 CGYAKHGDMDSIKTKIPSLKPQ 223
+ K D+ + + ++ Q
Sbjct: 389 NEFCKKEDVKTAAKLLKEMQRQ 410
>gi|255583549|ref|XP_002532531.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527743|gb|EEF29847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 212
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 6/195 (3%)
Query: 115 EPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAND 174
+P+++TY + LI YC++G++E A +I M + + F A+I G +
Sbjct: 17 KPDKITY------TTLIDGYCKEGDLESALEIRNIMIKEGVELDIVAFTAIISGLCKEGK 70
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234
+ AE L M +AG +P TYT +M G+ K GDM + + ++ + ++ +
Sbjct: 71 VIDAERALREMLKAGFKPDDATYTMVMDGFCKKGDMKTGFKLLKEMQSDGHVPGVVTYNV 130
Query: 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSL 294
S M +A +L M G+ P TY L+ G+ KHG++ +L ++ G
Sbjct: 131 LMNGYCKQSQMKNANMLLDAMMNLGVVPDDITYNILLEGHCKHGNLQDFHKLQSEKGVVA 190
Query: 295 VNGDYLDIIHALAVS 309
Y +++ L+ S
Sbjct: 191 DYASYKSLLNELSRS 205
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSF 232
M A + M++ +P TYT L+ GY K GD++S ++ + +K EL + F+
Sbjct: 1 MREARKLADEMNERCQKPDKITYTTLIDGYCKEGDLESALEIRNIMIKEGVELDIVAFTA 60
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
++ L + AE L M +AG +P TYT +M G+ K GDM + +LL + S
Sbjct: 61 IISGL--CKEGKVIDAERALREMLKAGFKPDDATYTMVMDGFCKKGDMKTGFKLLKEMQS 118
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA----------GL 342
GH V +V + + + + M A G+
Sbjct: 119 ----------------DGH------VPGVVTYNVLMNGYCKQSQMKNANMLLDAMMNLGV 156
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVS 391
P TY L+ G+ KHG++ +L ++ G Y +++ L+ S
Sbjct: 157 VPDDITYNILLEGHCKHGNLQDFHKLQSEKGVVADYASYKSLLNELSRS 205
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 128/298 (42%), Gaps = 32/298 (10%)
Query: 82 DISHYNALLRVYLD---NEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
++ YN L+ Y N + L ++ + PN T+ LI + +D
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDG------FWKDD 310
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ G+ K+ + M D+ + +N+LI G + A G+ M AG++P+ TY
Sbjct: 311 NLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYH 370
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---M 255
L+ G+ K+G M S+K Q + ++ N+LI + + + M
Sbjct: 371 SLINGFCKNGMMKEALDMFDSVKGQGTR---PTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII--HALAVSGHGE 313
+ G+ P TY L+ G ++G++++ ++L Q L N D++ H L + G+
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ----LTNKGLPDLVTFHIL-MEGYCS 482
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ A + MS+ GL+P TY +M GY K G++ + + Q
Sbjct: 483 RGESRKAAMLL----------KEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQ 530
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ ++ L+ Y + L ++ G++P +TY ++ YC++GN++
Sbjct: 469 DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKG------YCKEGNLK 522
Query: 142 GATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
AT + M +++ ++ +N L+ G+SQ + A +L M + GL P+ TY
Sbjct: 523 AATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 97/252 (38%), Gaps = 31/252 (12%)
Query: 148 EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 207
E +R K P + FN +I + M A ++ M G P+ +Y L+ GY K
Sbjct: 213 EMIRRKIQP-NVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKL 271
Query: 208 GDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSA 264
G + LK E + + N+LI ++ + + M + P+
Sbjct: 272 GGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNV 331
Query: 265 QTYTKLMCGYAKHGDMD---SVRRLLAQSG--------SSLVNG--------DYLDIIHA 305
TY L+ G G ++ +R + +G SL+NG + LD+
Sbjct: 332 ITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFD- 390
Query: 306 LAVSGHGE------YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
+V G G Y + A I + M + G+ P TY L+ G ++
Sbjct: 391 -SVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 360 GDMDSIRRLLAQ 371
G++++ ++L Q
Sbjct: 450 GNIEAAKKLFDQ 461
>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 24/280 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN ++R + + + +++ + P T+ +I + + G++
Sbjct: 533 DVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHG------FARSGDMR 586
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + MR + FNALI G + M A IL MS AG+ P+ TYT +M
Sbjct: 587 RALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIM 646
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYA GD LK + ++++ S M SA + MS +
Sbjct: 647 HGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIP 706
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
+ Y L+ G+A+ GD+ L+ Q V D Y I+A +G + +
Sbjct: 707 RNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKT 766
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
M G++P+ +TYT L+ G+A+
Sbjct: 767 IQ---------------EMEVVGVKPNIKTYTTLIHGWAR 791
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 122/292 (41%), Gaps = 37/292 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +L+ Y + K++ +GIE + VTY S L+ + + + E A
Sbjct: 327 YTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTY------SILVGGFAKIADAEAADH 380
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ +++ ++ ++ +IY H QA +M AE ++ M + G++ Y +M GY
Sbjct: 381 WFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYT 440
Query: 206 KHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
G+ + LK P + C L NL I + ++ A + MM AG+
Sbjct: 441 IIGNEEKCLIVFDRLKECGFTPSVISYGC----LINLYIKIGK-VSKALEVSKMMEVAGI 495
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
+ + +TY+ L+ G+ + D + + + D Y +II A G+ +D
Sbjct: 496 KHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGN---MDR 552
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
V M + P+ +T+ ++ G+A+ GDM RR L
Sbjct: 553 AIRTV------------KEMQKERHRPTTRTFMPIIHGFARSGDM---RRAL 589
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 138/339 (40%), Gaps = 32/339 (9%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+++ Y + G++ A E MR + + V+ +LI+ ++ DM A + M + G
Sbjct: 295 MVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEG 354
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+E S TY+ L+ G+AK D ++ K + + + +M AE
Sbjct: 355 IEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAE 414
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSG--------SSLVN-- 296
++ M + G++ Y +M GY G+ + V L + G L+N
Sbjct: 415 ALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLY 474
Query: 297 ------GDYLDIIHALAVSGHGEYIDEVSAIV-CFVNI-----CFHWLEGPMMSQAGLEP 344
L++ + V+G + S ++ FV + F E + + GL+P
Sbjct: 475 IKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFED--VVKDGLKP 532
Query: 345 SAQTYTKLMCGYAKHGDMD-SIR--RLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEII 401
Y ++ + G+MD +IR + + + ++ IIH A SG EI
Sbjct: 533 DVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIF 592
Query: 402 SKIQ-PGVGYSADAANH-IYHLINKGQIDAAYRIVNTLA 438
++ G + N I L+ K Q++ A I++ ++
Sbjct: 593 DMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMS 631
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD+ Y ALL+ + S ++ SQ I N Y LI + + G++
Sbjct: 672 LDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDG------WARRGDV 725
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A ++++ M+ + + + I +A DM A + M G++P+ +TYT L
Sbjct: 726 WEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTL 785
Query: 201 MCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL 238
+ G+A+ + + K LKP ++ C +T+LL
Sbjct: 786 IHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCL---MTSLL 825
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P + YN L+ + + + + +++ +G++P+ TY + I+ C+ G
Sbjct: 705 IPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTY------TSFINACCKAG 758
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+++ ATK ++ M + + LI+G ++A+ A M AGL+P Y
Sbjct: 759 DMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYH 818
Query: 199 KLM 201
LM
Sbjct: 819 CLM 821
>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Brachypodium distachyon]
Length = 814
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 133/311 (42%), Gaps = 40/311 (12%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + ++I+ NAL+ + ++ T+ L + ++G+E + +TY +I C
Sbjct: 470 EKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGC------C 523
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+D IE A K+ + M K F +FN++I+ + M A +L M G++P
Sbjct: 524 KDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVV 583
Query: 196 TYTKLMCGYAKHGDMDSIKTKIP-----SLKPQSELFLCFSFQLTNLLI---LVSSDMAS 247
+Y ++ GY K D+ + LKP + ++ N LI + +++
Sbjct: 584 SYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIY--------NALIGGYGRNGNISG 635
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN---GDYLDIIH 304
A G+L M G++P+ TY LM G +D + + QS + + Y +I
Sbjct: 636 AIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQ 695
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
L G +DE ++ E M + P+ TYT LM Y K G+ +
Sbjct: 696 GLCKIGK---MDEA----------MNYFEE--MRSRSIPPNKITYTTLMYAYCKSGNNEE 740
Query: 365 IRRLLAQNGSS 375
+L + SS
Sbjct: 741 ASKLFDEMVSS 751
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 140/346 (40%), Gaps = 48/346 (13%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N L+ + H ++ S+ ++ VTY LI+ + C++G +E A +I
Sbjct: 340 NELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYN-LIARA-----LCKEGEMERAERI 393
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQ-ANDMASAEGILTMMSQAGLEPS---AQTYTKLMC 202
LE M I G+FN+++ G Q + S +++ M + G++P+ TK +C
Sbjct: 394 LEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLC 453
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAG 259
+H + I K+ E LC + +N LI +M A +L M G
Sbjct: 454 QGRRHQEAVGIWLKML------EKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKG 507
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGE--- 313
+E TY ++ G K ++ +L + + G + IIHA G E
Sbjct: 508 MELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEAL 567
Query: 314 ------YIDEVSA-IVCFVNICFHWLEGPMMSQA----------GLEPSAQTYTKLMCGY 356
I+ V +V + I + + + +A GL+P+A Y L+ GY
Sbjct: 568 HLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGY 627
Query: 357 AKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDE 399
++G++ + + G N Y ++H + H +DE
Sbjct: 628 GRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMC---HAGLVDE 670
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 111/280 (39%), Gaps = 34/280 (12%)
Query: 101 SPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEG 160
S ++++ +G++PN + + CQ + A I M +K I+
Sbjct: 425 SVVRLISEMVKRGMKPNDALM------TACTKQLCQGRRHQEAVGIWLKMLEKGLCINIA 478
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTK--- 216
NALI+G + +M A +L M G+E TY ++ G K + +++K +
Sbjct: 479 TSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDM 538
Query: 217 -IPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ---AGLEPSAQTYTKLMC 272
KP + +F N +I D+ E L ++ Q G++P +Y ++
Sbjct: 539 IRKGFKPDAYMF--------NSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIID 590
Query: 273 GYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWL 332
GY K D+ L + + + + +I+ + G+G + AI
Sbjct: 591 GYCKAKDIQKANEYLNELMACGLKPNA--VIYNALIGGYGRNGNISGAIGVL-------- 640
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
M G++P+ TY LM G +D + + Q+
Sbjct: 641 --DTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQS 678
>gi|302805861|ref|XP_002984681.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
gi|300147663|gb|EFJ14326.1| hypothetical protein SELMODRAFT_30598 [Selaginella moellendorffii]
Length = 651
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 132/317 (41%), Gaps = 48/317 (15%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +L+ Y + ++ SQGI+ N + +IS Y GN E A
Sbjct: 169 YTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVF------CSIISGYASAGNNEAAEH 222
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
E + + V+N+++ + QA +M + E +L M + G + + YT ++ G+A
Sbjct: 223 WFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFA 282
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ D + C SF + + +MA A IL M + G+ P+
Sbjct: 283 EIRDEEK----------------CLSFFHRLKVSPQAGNMAKALDILEEMDKHGVSPNKM 326
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE----YIDEV 318
Y +M GYA+ GD + ++ S+ + D Y ++HA +G + ++ +
Sbjct: 327 IYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENI 386
Query: 319 SA------IVCFVNICFHWLEGPMMSQ----------AGLEPSAQTYTKLMCGYAKHGDM 362
A I + +I +++G + + AGL P +Y L+ G AK M
Sbjct: 387 EANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQM 446
Query: 363 DSIRRLLAQNGSSLVNG 379
++ R +L + L NG
Sbjct: 447 ENARLMLNE---MLANG 460
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 124/285 (43%), Gaps = 26/285 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN L+ + L +E+ + P TY + ++ Y + GNI+
Sbjct: 359 DIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETY------TSILDGYVKGGNIQ 412
Query: 142 GATKILEFMRDKTFPISEGV--FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
A ++ F R KT + GV +N+L+ G ++A M +A +L M G+ PS + YT
Sbjct: 413 KALEV--FDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPSERIYTA 470
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L GYA+ GD++ +K ++ ++ S M A + ++ AG
Sbjct: 471 LTEGYARTGDVEKAFGVFQRMKKENLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAG 530
Query: 260 LEPSAQTYTKLMCG-YAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEYI 315
L+ + TY ++ G YA+ G ++ L++ + G+ Y +I+A VSG E +
Sbjct: 531 LKHNQITYCTMLDGAYARAGRVEEAEELVSAMERDGTKPDTLIYNSLINAYGVSGRHEDM 590
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+ + A + S +P TY L+ YA+ G
Sbjct: 591 EALLAKMV------------KSSSKQTKPDIGTYNTLIQVYAQAG 623
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/442 (19%), Positives = 166/442 (37%), Gaps = 59/442 (13%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ Y + G+ A E MR + ++ +LI+ +++A DM A M G
Sbjct: 137 LVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACTEEMLSQG 196
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
++ + + ++ GYA G+ ++ + K ++ + + + +M + E
Sbjct: 197 IQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVE 256
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+L M + G + + YT ++ G+A+ D + L H L VS
Sbjct: 257 ALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKC----------------LSFFHRLKVS 300
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ + I+ M + G+ P+ Y +M GYA+ GD + ++
Sbjct: 301 PQAGNMAKALDIL------------EEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVW 348
Query: 370 AQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQ 426
S+ + D Y ++HA +G + ++ I+ AN +
Sbjct: 349 EDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIE---------ANRLLP-----T 394
Query: 427 IDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTN--QPGVGYSADAANHIYHLINKGQ 484
I+ I++ + NI V +KT +PGV + + L Q
Sbjct: 395 IETYTSILDGYVKGGNIQ------KALEVFDRIKTAGLRPGV---VSYNSLLSGLAKARQ 445
Query: 485 IDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFN 544
++ A ++N + + + E++ L +T ++K V R+ ENL
Sbjct: 446 MENARLMLNEMLANGVVPSERIYTA--LTEGYARTGD-VEKAFGVFQRMKKENLAIDIVA 502
Query: 545 LAVLIKAHVLKEDYTGAVETFE 566
L+KA GA E F+
Sbjct: 503 YGALLKACCNSGAMHGAAEVFQ 524
Score = 42.7 bits (99), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
++ +DI Y ALL+ ++ + ++ G++ N++TY ++ + Y +
Sbjct: 495 NLAIDIVAYGALLKACCNSGAMHGAAEVFQQITDAGLKHNQITYCTMLDGA-----YARA 549
Query: 138 GNIEGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMM---SQAGLEPS 193
G +E A +++ M RD T P + ++N+LI + + E +L M S +P
Sbjct: 550 GRVEEAEELVSAMERDGTKPDTL-IYNSLINAYGVSGRHEDMEALLAKMVKSSSKQTKPD 608
Query: 194 AQTYTKLMCGYAKHG 208
TY L+ YA+ G
Sbjct: 609 IGTYNTLIQVYAQAG 623
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 109/262 (41%), Gaps = 34/262 (12%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
K+ G P VTY LI+ Y GN+ A ++L+ M++ E +N
Sbjct: 430 LFEKMLKMGPLPTVVTYNTLING------YLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
L+ G S+ + SA M + GL P+ +YT L+ G++K G +D + LK
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVD---IALSLLKRME 540
Query: 225 ELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
E+ + + N +I + + AE I M + GL P+ TYT L+ G ++G
Sbjct: 541 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQ 600
Query: 282 SVRRLL--AQSGSSLVN-GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
++ + L N Y +I+ L G + E MS
Sbjct: 601 FAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD-------------------EAERMS 641
Query: 339 QAGLEPSAQTYTKLMCGYAKHG 360
+ G EP+ TY+ L+ G + G
Sbjct: 642 EIGCEPTLDTYSTLVSGLCRKG 663
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 132/334 (39%), Gaps = 59/334 (17%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+ D+ D+ Y +L+ + N + ++ +G +PN VTY S LI+ C
Sbjct: 226 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTY------STLINGLC 279
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+G ++ A +LE M +K + + I A ++ M + G P+ Q
Sbjct: 280 NEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQ 339
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELF------LCFSFQLTNLL------ 238
TYT L+ G ++ G ++ K L P + + LC + + L
Sbjct: 340 TYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 399
Query: 239 ------------------ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
+ + D+ A + M + G P+ TY L+ GY G++
Sbjct: 400 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNV 459
Query: 281 DSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
++ RLL ++G Y +++ + G E + F++ E M
Sbjct: 460 NNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE------------SASFYFQE---M 504
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ GL P+ +YT L+ G++K G +D LL +
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKR 538
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 118/286 (41%), Gaps = 40/286 (13%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLA-KLESQGIEPNRVTYQQLISNSKLISKY 134
E+ ++ YNA++ L E+ FS + + K+ QG+ PN +TY + LI
Sbjct: 541 EMGCNPNVESYNAVING-LSKENRFSEAEKICDKMVEQGLLPNVITY------TTLIDGL 593
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C++G + A KI M + + +++LIYG Q AE MS+ G EP+
Sbjct: 594 CRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE----RMSEIGCEPTL 649
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLLILVSSDMASAE 249
TY+ L+ G + G + + +K P E++ +S + + L ++ A
Sbjct: 650 DTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIY--YSLLIAHCKNL---EVDHAL 704
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
I + G + Y L+C K G ++ + L N D +I+ + V
Sbjct: 705 KIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNAD--EIVWTVLVD 762
Query: 310 G---HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
G GE +++C L +M P+ QTY L
Sbjct: 763 GLLKEGE-----------LDLCMKLLH--IMESKNFTPNIQTYVIL 795
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 32/260 (12%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K+ +G+ PN VTY + LI++ C G A KI +M + +N +I
Sbjct: 363 KMLKEGLVPNTVTY------NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIK 416
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G D+ A + M + G P+ TY L+ GY G++++ + +K
Sbjct: 417 GLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG--- 473
Query: 228 LCFSFQLT-NLLILVSS---DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD-- 281
C + T N L+ S + SA M + GL P+ +YT L+ G++K G +D
Sbjct: 474 -CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIA 532
Query: 282 -SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
S+ + + + G + Y +I+ L+ +++ M +
Sbjct: 533 LSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC---------------DKMVEQ 577
Query: 341 GLEPSAQTYTKLMCGYAKHG 360
GL P+ TYT L+ G ++G
Sbjct: 578 GLLPNVITYTTLIDGLCRNG 597
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 86/426 (20%), Positives = 154/426 (36%), Gaps = 97/426 (22%)
Query: 89 LLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILE 148
+++ + E DFL ++ G + L S + L+ + + +EGA + +
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFS------LYSCNTLLIQLAKFEMVEGARNLYK 187
Query: 149 FMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 208
M + S FN LI S+ + AE IL+ + Q L P TYT L+ G+ ++
Sbjct: 188 QMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNR 247
Query: 209 DMDSI-----KTKIPSLKPQSELF------LC------------------------FSFQ 233
++D + P S + LC +++
Sbjct: 248 NLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYT 307
Query: 234 LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQS 290
L + A ++ M + G P+ QTYT L+ G ++ G ++ L + +
Sbjct: 308 LPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE 367
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG---------------- 334
G Y +I+ L V G ++ FHW+EG
Sbjct: 368 GLVPNTVTYNALINELCVGGRFSTALKI----------FHWMEGHGSLANTQTYNEIIKG 417
Query: 335 --------------PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL---AQNGSSLV 377
M + G P+ TY L+ GY G++++ RLL +NG
Sbjct: 418 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 477
Query: 378 NGDYLDIIHALAVSGHGE----YIDEII-SKIQPG-VGYSADAANHIYHLINKGQIDAAY 431
Y +++ + G E Y E++ + P V Y+A H G++D A
Sbjct: 478 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGH----SKDGKVDIAL 533
Query: 432 RIVNTL 437
++ +
Sbjct: 534 SLLKRM 539
>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 77.0 bits (188), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 24/280 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN ++R + + + +++ + P T+ +I + + G++
Sbjct: 512 DVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHG------FARSGDMR 565
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + MR + FNALI G + M A IL MS AG+ P+ TYT +M
Sbjct: 566 RALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIM 625
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYA GD LK + ++++ S M SA + MS +
Sbjct: 626 HGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIP 685
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
+ Y L+ G+A+ GD+ L+ Q V D Y I+A +G + +
Sbjct: 686 RNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKT 745
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
M G++P+ +TYT L+ G+A+
Sbjct: 746 IQ---------------EMEVVGVKPNIKTYTTLIHGWAR 770
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 122/292 (41%), Gaps = 37/292 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +L+ Y + K++ +GIE + VTY S L+ + + + E A
Sbjct: 306 YTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTY------SILVGGFAKIADAEAADH 359
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ +++ ++ ++ +IY H QA +M AE ++ M + G++ Y +M GY
Sbjct: 360 WFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYT 419
Query: 206 KHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
G+ + LK P + C L NL I + ++ A + MM AG+
Sbjct: 420 IIGNEEKCLIVFDRLKECGFTPSVISYGC----LINLYIKIGK-VSKALEVSKMMEVAGI 474
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
+ + +TY+ L+ G+ + D + + + D Y +II A G+ +D
Sbjct: 475 KHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGN---MDR 531
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
V M + P+ +T+ ++ G+A+ GDM RR L
Sbjct: 532 AIRTV------------KEMQKERHRPTTRTFMPIIHGFARSGDM---RRAL 568
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 138/339 (40%), Gaps = 32/339 (9%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+++ Y + G++ A E MR + + V+ +LI+ ++ DM A + M + G
Sbjct: 274 MVTYYARRGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEG 333
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+E S TY+ L+ G+AK D ++ K + + + +M AE
Sbjct: 334 IEMSLVTYSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAE 393
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSG--------SSLVN-- 296
++ M + G++ Y +M GY G+ + V L + G L+N
Sbjct: 394 ALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLY 453
Query: 297 ------GDYLDIIHALAVSGHGEYIDEVSAIV-CFVNI-----CFHWLEGPMMSQAGLEP 344
L++ + V+G + S ++ FV + F E + + GL+P
Sbjct: 454 IKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFED--VVKDGLKP 511
Query: 345 SAQTYTKLMCGYAKHGDMD-SIR--RLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEII 401
Y ++ + G+MD +IR + + + ++ IIH A SG EI
Sbjct: 512 DVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIF 571
Query: 402 SKIQ-PGVGYSADAANH-IYHLINKGQIDAAYRIVNTLA 438
++ G + N I L+ K Q++ A I++ ++
Sbjct: 572 DMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMS 610
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 14/163 (8%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD+ Y ALL+ + S ++ SQ I N Y LI + + G++
Sbjct: 651 LDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDG------WARRGDV 704
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A ++++ M+ + + + I +A DM A + M G++P+ +TYT L
Sbjct: 705 WEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTL 764
Query: 201 MCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL 238
+ G+A+ + + K LKP ++ C +T+LL
Sbjct: 765 IHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCL---MTSLL 804
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 6/123 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P + YN L+ + + + + +++ +G++P+ TY + I+ C+ G
Sbjct: 684 IPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTY------TSFINACCKAG 737
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+++ ATK ++ M + + LI+G ++A+ A M AGL+P Y
Sbjct: 738 DMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYH 797
Query: 199 KLM 201
LM
Sbjct: 798 CLM 800
>gi|414885834|tpg|DAA61848.1| TPA: leaf protein [Zea mays]
Length = 637
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 141/339 (41%), Gaps = 55/339 (16%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS----NSK-- 129
E V +++ YN L++ + D+ + + K+++ G EP+ VTY + S N +
Sbjct: 201 EGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETW 260
Query: 130 ----------------------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+I YC++G +E A + ++ M+D + +FN L+
Sbjct: 261 RAEELIVEIQTRVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLK 320
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKP 222
G ANDMA+ IL +M + G++P TY+ + ++ G M K ++P
Sbjct: 321 GFLDANDMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEP 380
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+++ + + + AE +L MS GL P+ T+T ++ G+ DM+S
Sbjct: 381 DPQVYSILAKGF-----VRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMES 435
Query: 283 VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
R+ + S V + L L + G+ E A MM + G+
Sbjct: 436 AMRVYDKMCKSGVYPN-LRTFETL-IWGYSEQKQPWKAEEVL----------QMMRETGV 483
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDY 381
+P TY + + G ++I NGS NG Y
Sbjct: 484 KPKQSTYCLIADAWKAVGLTENINN---SNGSP--NGPY 517
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 118/329 (35%), Gaps = 51/329 (15%)
Query: 56 EPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIE 115
+PS G C HT + + + +R +D++ + L +G +
Sbjct: 45 QPSKGQKQQLCTTCAKGHTCQ-----SVINRTRQMRALIDSKKPYQAHSVFKHLMDEGHK 99
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
P+ VTY L++ + ++ ++ D F FNALI +A M
Sbjct: 100 PSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIF------FNALINAFVEAKRM 153
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---------DMDSIKTKIPSLKPQSEL 226
A M +G P+ T+ L+ GY G DM ++ S++P
Sbjct: 154 GEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVEG---SVRP---- 206
Query: 227 FLCFSFQLTNLLILVSS-----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
LT ILV + ++ A G++ M G EP TY + YA + +
Sbjct: 207 ------NLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETW 260
Query: 282 SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
L+ + + + + + + G+ A+ C M AG
Sbjct: 261 RAEELIVEIQTRVRTSER---TWGIIIGGYCREGRLEEALRCV----------QQMKDAG 307
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
P+ + L+ G+ DM ++ ++L
Sbjct: 308 SVPNVVIFNTLLKGFLDANDMAAVNKILG 336
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 164/379 (43%), Gaps = 44/379 (11%)
Query: 70 FSVHTGELD--VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
+ V+ G L VP D+ Y L+ Y L +E +G PN VTY
Sbjct: 218 WKVYKGMLGAIVP-DVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTY------ 270
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S +I+ C+ G+++ A ++ M +K ++ LI G + + +L M
Sbjct: 271 SVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYT 330
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
GL+P YT L+ G+ K D+ +K ++ + K + F ++ L + L + D
Sbjct: 331 MGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYA--LIHGLCKI-GD 387
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNGDYL--D 301
+ AE + + M+ G++P QTY L+ GY K +M+ LL + +L Y+
Sbjct: 388 LEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGA 447
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
I++ L G +E L M+S GL+P+ YT ++ G K G
Sbjct: 448 IVNGLCHCGDLTRANE--------------LFQEMISW-GLKPNIVIYTTIVKGLVKEGR 492
Query: 362 MDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGE----YIDEIISK-IQPGVGYSAD 413
+ ++L ++ D Y +I +G E Y+ E+I+K ++P V Y+
Sbjct: 493 FEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNV-YTYG 551
Query: 414 AANHIYHLINKGQIDAAYR 432
A H Y G++ AA R
Sbjct: 552 AFIHGY--CRAGEMQAAER 568
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 18/259 (6%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D +++ GI+P+ TY LI Y + N+E A ++L ++ + + +
Sbjct: 393 DLFSEMTMMGIKPDIQTYNCLIEG------YYKVQNMEKAYELLIEIKKENLTANAYMCG 446
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
A++ G D+ A + M GL+P+ YT ++ G K G + + +K Q
Sbjct: 447 AIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQ 506
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
F + + + M + L M GL+P+ TY + GY + G+M +
Sbjct: 507 GLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAA 566
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
R + S + + D+I + G+ + + A F M G+
Sbjct: 567 ERSFIEMLDSGIAPN--DVICTDLIDGYCKDGNTTKAFAKF----------RCMLDQGVL 614
Query: 344 PSAQTYTKLMCGYAKHGDM 362
P QT++ L+ G +K+G +
Sbjct: 615 PDVQTHSVLIHGLSKNGKL 633
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 112/276 (40%), Gaps = 38/276 (13%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ ++ S G++PN V Y + ++ ++G E A KIL M+D+ +N
Sbjct: 463 ELFQEMISWGLKPNIVIY------TTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYN 516
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-----IKTKIP 218
+I G +A M + L M GL+P+ TY + GY + G+M + I+
Sbjct: 517 TVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDS 576
Query: 219 SLKPQSELFLCFSFQLTNLLILVSSDMASAEGI--LTMMSQAGLEPSAQTYTKLMCGYAK 276
+ P +C T+L+ D + + M G+ P QT++ L+ G +K
Sbjct: 577 GIAPND--VIC-----TDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSK 629
Query: 277 HGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
+G + + ++ + D Y +I L G + E+ +C
Sbjct: 630 NGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMC---------- 679
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ G+ P+ TY L+ G K G++ R L
Sbjct: 680 -----KKGINPNIVTYNALINGLCKLGEIAKARELF 710
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 90/216 (41%), Gaps = 26/216 (12%)
Query: 82 DISHYNALLRVYLD-NEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
++ Y A + Y E + F+ L+S GI PN V + LI YC+DGN
Sbjct: 546 NVYTYGAFIHGYCRAGEMQAAERSFIEMLDS-GIAPNDVIC------TDLIDGYCKDGNT 598
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A M D+ + LI+G S+ + A G+ + + GL P TYT L
Sbjct: 599 TKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSL 658
Query: 201 MCGYAKHGDM--------DSIKTKI-PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
+ K GD+ D K I P++ + L + L L ++A A +
Sbjct: 659 ISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNAL-------INGLCKL--GEIAKAREL 709
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + GL ++ TY+ ++ GY K ++ +L
Sbjct: 710 FDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLF 745
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 140/363 (38%), Gaps = 54/363 (14%)
Query: 34 ALGAFLVLL-------VLLFVYLNSKWCSEPSLGPGNLPCEDPFSVH--TGELDVPLDIS 84
A+G F LL V + L S C E L + F +H + + +I
Sbjct: 636 AMGVFSELLDKGLVPDVFTYTSLISNLCKEGDL-------KAAFELHDDMCKKGINPNIV 688
Query: 85 HYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
YNAL+ + + +G+ N VTY S +I+ YC+ N+ A
Sbjct: 689 TYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTY------STIIAGYCKSANLTEAF 742
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
++ M+ P V+ ALI G +A + A + M + G+ S + L+ G+
Sbjct: 743 QLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGF 801
Query: 205 AKHGDM--------DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
K G + D + I + + + + N+ AE + M
Sbjct: 802 FKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNI--------KEAEQLFMEMQ 853
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
+ + P+ TYT L+ GY + G + L + + + D D+ ++ V H + +
Sbjct: 854 KRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPD--DLAWSVMVDAHLKEGN 911
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL---AQNG 373
+ A+ L M+S+ G+ YT L+ KH ++ + ++L + G
Sbjct: 912 WIKALK---------LVDDMLSE-GVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQG 961
Query: 374 SSL 376
S L
Sbjct: 962 SKL 964
>gi|195613918|gb|ACG28789.1| leaf protein [Zea mays]
Length = 637
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 141/339 (41%), Gaps = 55/339 (16%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS----NSK-- 129
E V +++ YN L++ + D+ + + K+++ G EP+ VTY + S N +
Sbjct: 201 EGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETW 260
Query: 130 ----------------------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+I YC++G +E A + ++ M+D + +FN L+
Sbjct: 261 RAEELIVEIQTRVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLK 320
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKP 222
G ANDMA+ IL +M + G++P TY+ + ++ G M K ++P
Sbjct: 321 GFLDANDMAAVNKILGLMKKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEP 380
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+++ + + + AE +L MS GL P+ T+T ++ G+ DM+S
Sbjct: 381 DPQVYSILAKGF-----VRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMES 435
Query: 283 VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
R+ + S V + L L + G+ E A MM + G+
Sbjct: 436 AMRVYDKMCKSGVYPN-LRTFETL-IWGYSEQKQPWKAEEVL----------QMMRETGV 483
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDY 381
+P TY + + G ++I NGS NG Y
Sbjct: 484 KPKQSTYCLIADAWKAVGLTENINN---SNGSP--NGPY 517
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 77/392 (19%), Positives = 141/392 (35%), Gaps = 59/392 (15%)
Query: 56 EPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIE 115
+PS G C HT + + + +R +D++ + L +G +
Sbjct: 45 QPSKGQKQQLCTTCAKGHTCQ-----SVINRTRQMRALIDSKKPYQAHSVFKHLMDEGHK 99
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
P+ VTY L++ + ++ ++ D F FNALI +A M
Sbjct: 100 PSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIF------FNALINAFVEAKRM 153
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---------DMDSIKTKIPSLKPQSEL 226
A M +G P+ T+ L+ GY G DM ++ S++P
Sbjct: 154 GEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVEG---SVRP---- 206
Query: 227 FLCFSFQLTNLLILVSS-----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
LT ILV + ++ A G++ M G EP TY + YA + +
Sbjct: 207 ------NLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETW 260
Query: 282 SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
L+ + + + + + + G+ A+ C M AG
Sbjct: 261 RAEELIVEIQTRVRTSER---TWGIIIGGYCREGRLEEALRCV----------QQMKDAG 307
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHAL---AVSGHGEYID 398
P+ + L+ G+ DM ++ ++L + D + H L + GH
Sbjct: 308 SVPNVVIFNTLLKGFLDANDMAAVNKILGLMKKFGIKPDIVTYSHQLNTFSSLGHMAKCM 367
Query: 399 EIISK-IQPGVGYSADAANHIYHLINKGQIDA 429
+ K I+ G+ + +Y ++ KG + A
Sbjct: 368 HVFDKMIEAGI----EPDPQVYSILAKGFVRA 395
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 128/302 (42%), Gaps = 38/302 (12%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P ++ +N L+ ++ G++P V++ LI+ YC+ GN
Sbjct: 229 PPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLING------YCKSGN 282
Query: 140 IEGATKILEFMRD-KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E ++ M + + FP ++ALI G + + A + M GL P+ T+T
Sbjct: 283 LEEGFRLKMVMEEFRVFP-DVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFT 341
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELF---LCFSFQLTNLLI---LVSSDMASAEGIL 252
L+ G K+G +D +L+ ++F L L N LI A +
Sbjct: 342 TLINGQCKNGRVDL------ALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFV 395
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVS 309
M++ GL P TYT L+ G K GD++ +R+ + + G L N + II L
Sbjct: 396 GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRD 455
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G+ +D + M +AGL+P TYT +M G+ K GD+ +LL
Sbjct: 456 --GKIVDAERTL-------------REMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLL 500
Query: 370 AQ 371
+
Sbjct: 501 KE 502
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 138/319 (43%), Gaps = 28/319 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E V D+ Y+AL+ ++ +G+ PN VT+ LI+ C
Sbjct: 295 EFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQ------C 348
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
++G ++ A +I + M K ++N LI G + A + M++ GL P
Sbjct: 349 KNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKF 408
Query: 196 TYTKLMCGYAKHGDMD-SIKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILT 253
TYT L+ G K GD++ +++ + +K +L + F+ ++ L + AE L
Sbjct: 409 TYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGL--CRDGKIVDAERTLR 466
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS-SLVNG--DYLDIIHALAVSG 310
M +AGL+P TYT +M G+ K GD+ +LL + S + G Y +++ L G
Sbjct: 467 EMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQG 526
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+ D L M++ G+ P TY L+ G+ KHG + + +
Sbjct: 527 QVKNAD--------------MLLNAMLN-LGVVPDDITYNILLQGHCKHGKLGDFQNVKT 571
Query: 371 QNGSSLVNGDYLDIIHALA 389
+ G Y ++H L+
Sbjct: 572 EMGLVSDYASYRSLLHELS 590
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 109/259 (42%), Gaps = 32/259 (12%)
Query: 147 LEF---MRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
LEF + D +P + FN L+ + + A+ I + + GL+P+A ++ L+ G
Sbjct: 217 LEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLING 276
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFS--FQLTNLL--ILVSSDMASAEGILTMMSQAG 259
Y K G+++ + LK E F F F + L+ + + A + M G
Sbjct: 277 YCKSGNLE----EGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRG 332
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYID 316
L P+ T+T L+ G K+G +D + Q + + D Y +I L G Y
Sbjct: 333 LVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGG---YFR 389
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNG 373
E V M++ GL P TYT L+ G K GD++ +R+ + + G
Sbjct: 390 EARKFV------------GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEG 437
Query: 374 SSLVNGDYLDIIHALAVSG 392
L N + II L G
Sbjct: 438 IQLDNVAFTAIISGLCRDG 456
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 122/314 (38%), Gaps = 29/314 (9%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H + V D YN ++R Y L K+ G++P+ VTY S LI
Sbjct: 260 HMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTY------SLLIQ 313
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
YC+ G A + + M K + +++ L++G++ + +L +M + G+
Sbjct: 314 YYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPF 373
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ + L+C YAKHG +D T ++ S+ ++ + + A
Sbjct: 374 EHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHF 433
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL----------------------LAQS 290
M GL P+ ++T L+ G G+ V L L +
Sbjct: 434 NQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKE 493
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG-PMMSQAGLEPSAQTY 349
G + D+ D++ + V + + CFV ++ M GL P + TY
Sbjct: 494 GRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTY 553
Query: 350 TKLMCGYAKHGDMD 363
L+ GY K+G ++
Sbjct: 554 NSLLNGYFKNGRVE 567
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 120/297 (40%), Gaps = 38/297 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN ++ + ++ QG+ P+ VTY LI C+ ++
Sbjct: 199 NVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDG------LCKAQAMD 252
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A IL+ M DK +N +I G+ + A +L MS +GL+P TY+ L+
Sbjct: 253 KAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLI 312
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELF--LCFSFQLTNLLILVSSDMASAEGILTM 254
Y K G ++ S+ KP S ++ L + LI V +L +
Sbjct: 313 QYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRD-------LLDL 365
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
M + G+ + + L+C YAKHG +D + + + D Y +IH L +G
Sbjct: 366 MIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGR 425
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
E + +H+ + M GL P+ ++T L+ G G+ + L
Sbjct: 426 VE------------DAVYHFNQ---MVSEGLSPNIISFTSLIHGLCSIGEWKKVEEL 467
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 136/306 (44%), Gaps = 43/306 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 120 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 179
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 180 RLKSAMLANGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLVKGLIPNGVTFTTLI 236
Query: 272 CGYAKHGDMDSV----RRLLAQS-GSSLVNGDYLDIIHALAVSGH----GEYIDEVSAIV 322
G+ K+G +D +R+L+QS L+ Y +I+ L +G + IDE
Sbjct: 237 DGHCKNGRVDLAMEIYKRMLSQSLLPDLIT--YNTLIYGLCKNGDLKQAHDLIDE----- 289
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNG 379
MS GL+P TYT L+ G K GD+D+ R+ + Q L +
Sbjct: 290 --------------MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDV 335
Query: 380 DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNT 436
Y +I L G ++++ ++ VG D + I KG + +++
Sbjct: 336 AYTALISGLCQEGQSVDAEKMLREMLS-VGLKPDIGTYTMIINEFCKKGDVWKGSKLLKE 394
Query: 437 LARSAN 442
+ R+ +
Sbjct: 395 MQRNGH 400
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 193 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF------TTLIDGHCKNGRVD 246
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 247 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 306
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+D+ K + ++ L + ++ ++ L AE +L M G
Sbjct: 307 DGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGL--CQEGQSVDAEKMLREMLSVG 364
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ +LL +
Sbjct: 365 LKPDIGTYTMIINEFCKKGDVWKGSKLLKE 394
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 130/305 (42%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 132 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKSAMLASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLVKGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+DS R+ + Q L Y
Sbjct: 302 ------------MSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAY 349
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+ L G ++++ ++ VG DA + I KG + +++ +
Sbjct: 350 TALXSGLCQEGRSVDAEKMLREMLS-VGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 408
Query: 439 RSANI 443
R ++
Sbjct: 409 RDGHV 413
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+DS + ++ ++ + AE +L M GL+
Sbjct: 319 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P A+TYT ++ + K GD+ +LL +
Sbjct: 379 PDARTYTMIINEFCKKGDVWKGSKLLKE 406
>gi|226533082|ref|NP_001141414.1| uncharacterized protein LOC100273524 [Zea mays]
gi|194704512|gb|ACF86340.1| unknown [Zea mays]
Length = 637
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 141/340 (41%), Gaps = 57/340 (16%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS----NSK-- 129
E V +++ YN L++ + D+ + + K+++ G EP+ VTY + S N +
Sbjct: 201 EGSVRPNLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETW 260
Query: 130 ----------------------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+I YC++G +E A + ++ M+D + +FN L+
Sbjct: 261 RAEELIVEIQTRVRTSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLK 320
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKP 222
G ANDMA+ IL +M + G++P TY+ + ++ G M K ++P
Sbjct: 321 GFLDANDMAAVNKILGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEP 380
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+++ + + + AE +L MS GL P+ T+T ++ G+ DM+S
Sbjct: 381 DPQVYSILAKGF-----VRAQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMES 435
Query: 283 VRRLLAQSGSSLVNGDYLDI-IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
R+ + S G Y ++ + G+ E A MM + G
Sbjct: 436 AMRVYDKMCKS---GVYPNLRTFETPIWGYSEQKQPWKAEEVL----------QMMRETG 482
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDY 381
++P TY + + G ++I NGS NG Y
Sbjct: 483 VKPKQSTYCLIADAWKAVGLTENINN---SNGSP--NGPY 517
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 118/329 (35%), Gaps = 51/329 (15%)
Query: 56 EPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIE 115
+PS G C HT + + + +R +D++ + L +G +
Sbjct: 45 QPSKGQKQQLCTTCAKGHTCQ-----SVINRTRQMRALIDSKKPYQAHSVFKHLMDEGHK 99
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
P+ VTY L++ + ++ ++ D F FNALI +A M
Sbjct: 100 PSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIF------FNALINAFVEAKRM 153
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---------DMDSIKTKIPSLKPQSEL 226
A M +G P+ T+ L+ GY G DM ++ S++P
Sbjct: 154 GEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVEG---SVRP---- 206
Query: 227 FLCFSFQLTNLLILVSS-----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
LT ILV + ++ A G++ M G EP TY + YA + +
Sbjct: 207 ------NLTTYNILVKAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETW 260
Query: 282 SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
L+ + + + + + + G+ A+ C M AG
Sbjct: 261 RAEELIVEIQTRVRTSER---TWGIIIGGYCREGRLEEALRCV----------QQMKDAG 307
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
P+ + L+ G+ DM ++ ++L
Sbjct: 308 SVPNVVIFNTLLKGFLDANDMAAVNKILG 336
>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
Length = 905
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 24/280 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D + YN L+ + + L K++ + ++P+ ++ +I Y G+++
Sbjct: 512 DRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEG------YAVAGDMK 565
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A L+ MR + +NALI+G + + + A +L MS AG+ P+ TYT +M
Sbjct: 566 SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 625
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYA GD+ +K + ++ S M SA + MS +
Sbjct: 626 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 685
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
+ Y L+ G+A+ GD+ L+ Q V + Y I+A +G + ++V
Sbjct: 686 RNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKV 745
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
M GL+P+ +TYT L+ G+A+
Sbjct: 746 IE---------------EMVDVGLKPNVKTYTTLIKGWAR 770
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 122/312 (39%), Gaps = 29/312 (9%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I Y LL +Y+ ++ES GI+ N TY S LI+ + +
Sbjct: 443 IISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTY------SMLINGFIHLHDFAN 496
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A I E M ++N LI + +M A IL M + ++PS + + ++
Sbjct: 497 AFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIE 556
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
GYA GDM S + ++ + ++ ++ + A +L MS AG+ P
Sbjct: 557 GYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITP 616
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVS 319
+ TYT +M GYA GD+ + S + D Y ++ A SG + V+
Sbjct: 617 NEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVT 676
Query: 320 AIVCFVNICFH-----------------WLEGPMMSQA---GLEPSAQTYTKLMCGYAKH 359
+ F I + W +M Q G+ P+ TYT + K
Sbjct: 677 REMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKA 736
Query: 360 GDMDSIRRLLAQ 371
GDM +++ +
Sbjct: 737 GDMQRAEKVIEE 748
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 123/288 (42%), Gaps = 39/288 (13%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
+ +++S+G+E VTY LIS I+ Q GN+E A +++ M + V++++
Sbjct: 355 VEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSM 414
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
++G++ + + + + G +PS +Y L+ Y K G + +L E
Sbjct: 415 MHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAK------ALSISKE 468
Query: 226 LFLC--------FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
+ C +S + + L D A+A I M ++GL+P Y L+ + K
Sbjct: 469 MESCGIKHNNKTYSMLINGFIHL--HDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKM 526
Query: 278 GDMDSVRRLLAQSGSSLV---NGDYLDIIHALAVSGHG----EYIDEVSAIVCF-----V 325
G+MD +L + + N + II AV+G + +D + C
Sbjct: 527 GNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTY 586
Query: 326 NICFHWLEGP-----------MMSQAGLEPSAQTYTKLMCGYAKHGDM 362
N H L MS AG+ P+ TYT +M GYA GD+
Sbjct: 587 NALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDI 634
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + LD+ Y LLR + S ++ Q I N Y LI +
Sbjct: 646 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDG------WA 699
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G++ A +++ M++ P + + + I +A DM AE ++ M GL+P+ +
Sbjct: 700 RRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVK 759
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL 238
TYT L+ G+A+ D + K+ LKP + C +T+LL
Sbjct: 760 TYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCL---VTSLL 804
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 111/277 (40%), Gaps = 31/277 (11%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G+ A E MR + + VF +L++ ++ A DM A + M G
Sbjct: 303 MIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEG 362
Query: 190 LEPSAQTYTKLMCGYAK------HGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILV 241
LE + TY+ L+ G+AK G+M+ + + ++ + + I+
Sbjct: 363 LELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQ 422
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGD 298
+ + + + + G +PS +Y L+ Y K G + S+ + + G N
Sbjct: 423 NENKCLV--VFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKT 480
Query: 299 YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
Y ++ ++G D +A F M ++GL+P Y L+ + K
Sbjct: 481 Y-----SMLINGFIHLHDFANAFAIFEE----------MLRSGLQPDRAIYNLLIEAFCK 525
Query: 359 HGDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSG 392
G+MD I + + N + II AV+G
Sbjct: 526 MGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAG 562
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 22/180 (12%)
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
EPS + + ++ YAK GD + +++ + F F V+ DM A
Sbjct: 294 EPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 353
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAK------HGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
+ M GLE + TY+ L+ G+AK G+M+ L+ + ++ +D+ H
Sbjct: 354 CVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAP-IDVYH 412
Query: 305 ALAVSGHGEYI--DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
++ HG I +E +V F + + G +PS +Y L+ Y K G +
Sbjct: 413 SMM---HGYTIIQNENKCLVVFER----------LKECGFKPSIISYGCLLNLYVKIGKV 459
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 124/284 (43%), Gaps = 33/284 (11%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ G PN VTY + L++ +C+ G ++ A +++ MR+ S FN ++ G
Sbjct: 181 MRGAGCAPNVVTY------NTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNG 234
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
+A M A + M++ GL P +Y L+ GY K G + + + +
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
+F + + ++ A ++ M + GL + T+T L+ G+ ++G +D LLA
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDA--LLA 352
Query: 289 QSGSSLVNGDYLDIIHALAVSGHGEY--IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
+ + + ++G+ + +DE ++ H +E G++P
Sbjct: 353 MKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELI-------HEMEAK-----GMKPDV 400
Query: 347 QTYTKLMCGYAKHGDMDS---IRRLLAQNG--------SSLVNG 379
TY+ ++ GY K GD DS + R + + G SSL+ G
Sbjct: 401 VTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRG 444
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 110/278 (39%), Gaps = 55/278 (19%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ Y A++ +G+ P+ VT+ + LI C+ GN+E A
Sbjct: 263 YNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTF------TSLIHAMCRAGNLERAVA 316
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
++ MR++ ++E F ALI G + + A + M + ++PS Y L+ GY
Sbjct: 317 LVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYC 376
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G MD + I ++ + G++P
Sbjct: 377 KLGRMDEARELIHEMEAK-----------------------------------GMKPDVV 401
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD-IIHALAVSGHGEYIDEVSAIVCF 324
TY+ ++ GY K GD DS L + L G D I ++ + G E A F
Sbjct: 402 TYSTILSGYCKIGDTDSAFEL---NRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELF 458
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
M Q GL+P TYT L+ G+ K G++
Sbjct: 459 ----------EKMLQLGLQPDEFTYTTLIDGHCKEGNV 486
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 92/213 (43%), Gaps = 29/213 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D+ + +L+ + + ++ +G+ N T+ + LI +C++G
Sbjct: 292 VP-DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTF------TALIDGFCRNG 344
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A ++ MR+ S +N LI G+ + M A ++ M G++P TY+
Sbjct: 345 FLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYS 404
Query: 199 KLMCGYAKHGDMDSI---------KTKIPSLKPQSELF--LCFSFQLTNLLILVSSDMAS 247
++ GY K GD DS K +P S L LC +L +
Sbjct: 405 TILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGD----------- 453
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
A + M Q GL+P TYT L+ G+ K G++
Sbjct: 454 ACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNV 486
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 129/311 (41%), Gaps = 37/311 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E+ V D+ YN ++ + D ++ +G++PN VTY +I C
Sbjct: 218 EMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDG------LC 271
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ ++ A + + M DK S +N +I G +A + AEG+ M G++P
Sbjct: 272 KAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHV 331
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TY ++ G K +D + + KP + L ++ + L S D AEG
Sbjct: 332 TYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDN---LTYTIIIDGLCKAQSVD--RAEG 386
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALA 307
+ M G++P+ TY L+ GY G + V + + + + + D Y ++ L
Sbjct: 387 VFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLC 446
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG---DMDS 364
+G +E ++ M + G++PS Y ++ GY K G +M
Sbjct: 447 KNGK---CNEARSLF------------DSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHD 491
Query: 365 IRRLLAQNGSS 375
+ L+ NG S
Sbjct: 492 LLNLMVANGIS 502
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 140/337 (41%), Gaps = 35/337 (10%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G++P+ VTY +I C+ I+ A + + M DK + +I G +
Sbjct: 324 RGVKPDHVTYNTIIDG------LCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCK 377
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
A + AEG+ M G++P+ TY L+ GY G + + +I + F+
Sbjct: 378 AQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFT 437
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLA 288
+ L + + A + M + G++PS Y ++ GY K G +M + L+
Sbjct: 438 YGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMV 497
Query: 289 QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
+G S + + +I A A IDEV I F+ M Q GL P+ T
Sbjct: 498 ANGISPNHRIFNTVICAYAKRA---MIDEVMHI--FIK----------MKQQGLSPNVVT 542
Query: 349 YTKLMCGYAKHGDMDSIRRLLAQ---NGSSLVNGDYLDIIHALAVSGHGEYIDEII---- 401
Y L+ K G +D Q G + N + +++ L E ++E+
Sbjct: 543 YGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEML 602
Query: 402 -SKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTL 437
I+P + + + +L +G++ A R+++++
Sbjct: 603 NQGIRPDIVFFNTV---LCNLCKEGRVMEARRLIDSM 636
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N ++ Y K++ QG+ PN VTY LI C+ G ++ A
Sbjct: 508 FNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTY------GTLIDALCKLGRVDDAVL 561
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
M ++ + VFN+L+YG + E + M G+ P + ++C
Sbjct: 562 QFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLC 621
Query: 206 KHGDMDSIKTKIPS-----LKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQ 257
K G + + I S LKP + N LI +S M A +L M
Sbjct: 622 KEGRVMEARRLIDSMVCMGLKPDVISY--------NTLIDGHCFASRMDEAVKLLDGMVS 673
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDS 282
AGL+P+ +Y L+ GY K G +D+
Sbjct: 674 AGLKPNIVSYNTLLHGYCKAGRIDN 698
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 138/350 (39%), Gaps = 64/350 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ YL + ++ + +EP+ TY L+ C++G A
Sbjct: 403 YNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTY------GLLLDYLCKNGKCNEARS 456
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M K S ++ +++G+ + ++ +L +M G+ P+ + + ++C YA
Sbjct: 457 LFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYA 516
Query: 206 KHGDMDS-----IKTKIPSLKPQSELF------LC---------FSF-QLTNL------- 237
K +D IK K L P + LC F Q+ N
Sbjct: 517 KRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNV 576
Query: 238 --------LILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L V E L M++Q G+ P + ++C K G + RRL+
Sbjct: 577 VFNSLVYGLCTVDKWEKVEELFLEMLNQ-GIRPDIVFFNTVLCNLCKEGRVMEARRLI-- 633
Query: 290 SGSSLVNGDYLDII-HALAVSGH--GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
S + G D+I + + GH +DE + L+G M AGL+P+
Sbjct: 634 -DSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKL----------LDG--MVSAGLKPNI 680
Query: 347 QTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
+Y L+ GY K G +D+ + R + + G + Y I++ L SG
Sbjct: 681 VSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGR 730
>gi|414880641|tpg|DAA57772.1| TPA: hypothetical protein ZEAMMB73_835994 [Zea mays]
Length = 728
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 128/299 (42%), Gaps = 46/299 (15%)
Query: 107 AKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
+++E +GI N Y+ L+ YC+ IE A + M++K+ + +N L+
Sbjct: 371 SEMEKRGIASNTSIYETLMK------AYCKSNQIEEAEGLFVEMKEKSLQATTTTYNILM 424
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS------IKTKIPSL 220
+S+ E +L M G+ PSA++Y L+ Y + M ++ K +
Sbjct: 425 DAYSRRLQTEVVESLLLEMQDLGIRPSARSYNCLISAYGRQKKMSGKAENAFLRMKRDGI 484
Query: 221 KPQSELF--LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
KP S + L F++ L A I M + GL+P+ +TYT L+ + G
Sbjct: 485 KPLSSSYNALLFAYAANGL-------HEKAHAIYMDMKREGLKPTLETYTALLDTLRRAG 537
Query: 279 DMDSVRRLLAQSGSSLVN---GDYLDIIHAL--AVSGHGEYIDEVSAIVCFVNICFHWLE 333
D + L ++ ++V+ G I H + ++ HG Y+ I F
Sbjct: 538 DTEK----LMETWKTMVDEKFGGTRVIFHMVIDCLAKHGLYLQVRDVIYEF--------- 584
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALA 389
G M GL+P+ TY LM Y + G + +LL + + + D Y +I+A A
Sbjct: 585 GKM----GLKPTVMTYNILMNAYGRGGQHYKLPQLLKEMTALELKPDSITYCTMIYAYA 639
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 22/246 (8%)
Query: 72 VHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLI 131
V E + + YN L+ Y T L +++ GI P+ +Y LIS
Sbjct: 406 VEMKEKSLQATTTTYNILMDAYSRRLQTEVVESLLLEMQDLGIRPSARSYNCLISAYGRQ 465
Query: 132 SKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
K G E A L RD P+S +NAL++ ++ A I M + GL+
Sbjct: 466 KK--MSGKAENA--FLRMKRDGIKPLSSS-YNALLFAYAANGLHEKAHAIYMDMKREGLK 520
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG- 250
P+ +TYT L+ + GD + + ++ + F T ++ + D + G
Sbjct: 521 PTLETYTALLDTLRRAGDTEKLMETWKTMVDE-------KFGGTRVIFHMVIDCLAKHGL 573
Query: 251 ------ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLD 301
++ + GL+P+ TY LM Y + G + +LL + + + D Y
Sbjct: 574 YLQVRDVIYEFGKMGLKPTVMTYNILMNAYGRGGQHYKLPQLLKEMTALELKPDSITYCT 633
Query: 302 IIHALA 307
+I+A A
Sbjct: 634 MIYAYA 639
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 96/245 (39%), Gaps = 64/245 (26%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI+ +C DG + A I M + + ++ L+ + ++N + AEG+ M +
Sbjct: 353 LINIFCSDGLKKEALIIQSEMEKRGIASNTSIYETLMKAYCKSNQIEEAEGLFVEMKEKS 412
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
L+ + TY LM Y++ + Q+E+ E
Sbjct: 413 LQATTTTYNILMDAYSR--------------RLQTEV---------------------VE 437
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKH----GDMDSVRRLLAQSGSSLVNGDYLDIIHA 305
+L M G+ PSA++Y L+ Y + G ++ + + G ++ Y ++ A
Sbjct: 438 SLLLEMQDLGIRPSARSYNCLISAYGRQKKMSGKAENAFLRMKRDGIKPLSSSYNALLFA 497
Query: 306 LAVSG-----HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
A +G H Y+D M + GL+P+ +TYT L+ + G
Sbjct: 498 YAANGLHEKAHAIYMD--------------------MKREGLKPTLETYTALLDTLRRAG 537
Query: 361 DMDSI 365
D + +
Sbjct: 538 DTEKL 542
>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
Length = 879
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 24/280 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D + YN L+ + + L K++ + ++P+ ++ +I Y G+++
Sbjct: 486 DRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEG------YAVAGDMK 539
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A L+ MR + +NALI+G + + + A +L MS AG+ P+ TYT +M
Sbjct: 540 SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 599
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYA GD+ +K + ++ S M SA + MS +
Sbjct: 600 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 659
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
+ Y L+ G+A+ GD+ L+ Q V + Y I+A +G + ++V
Sbjct: 660 RNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKV 719
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
M GL+P+ +TYT L+ G+A+
Sbjct: 720 IE---------------EMVDVGLKPNVKTYTTLIKGWAR 744
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 110/282 (39%), Gaps = 64/282 (22%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G++P+R Y LI +C+ GN++ A ILE M+ + S F +I G++ A
Sbjct: 482 GLQPDRAIYNLLIE------AFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVA 535
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
DM SA L +M ++G P+ TY L+ G + K K+
Sbjct: 536 GDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVR-------KHKV--------------- 573
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
A +L MS AG+ P+ TYT +M GYA GD+ +
Sbjct: 574 -------------QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKE 620
Query: 293 SLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFH-----------------WL 332
S + D Y ++ A SG + V+ + F I + W
Sbjct: 621 SGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWE 680
Query: 333 EGPMMSQA---GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+M Q G+ P+ TYT + K GDM +++ +
Sbjct: 681 AEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEE 722
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 61/289 (21%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
+D P+D+ Y++++ Y ++ +L+ G +P+ +IS L++ Y +
Sbjct: 378 IDAPIDV--YHSMMHGYTIIQNENKCLVVFERLKECGFKPS------IISYGCLLNLYVK 429
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G + A I + M + ++ LI G +D A+A I M ++GL+P
Sbjct: 430 IGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAI 489
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y L+ + K G+MD +C IL M
Sbjct: 490 YNLLIEAFCKMGNMDRA--------------IC---------------------ILEKMQ 514
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
+ ++PS + + ++ GYA GDM S L+ +SG Y +IH L V H
Sbjct: 515 KERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL-VRKH-- 571
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+V V ++ MS AG+ P+ TYT +M GYA GD+
Sbjct: 572 ---KVQRAVSVLD---------KMSIAGITPNEHTYTIIMRGYAASGDI 608
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + LD+ Y LLR + S ++ Q I N Y LI +
Sbjct: 620 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDG------WA 673
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G++ A +++ M++ P + + + I +A DM AE ++ M GL+P+ +
Sbjct: 674 RRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVK 733
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL 238
TYT L+ G+A+ D + K+ LKP + C +T+LL
Sbjct: 734 TYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCL---VTSLL 778
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G+ A E MR + + VF +L++ ++ A DM A + M G
Sbjct: 248 MIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEG 307
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS-------IKTKIPSLKPQSELFLCFSFQLTNLL--IL 240
LE + TY+ L+ G+AK D S KTK+ SL +N++
Sbjct: 308 LELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLN---------GIIYSNIIHAHC 358
Query: 241 VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
S +M AE ++ M + G++ Y +M GY
Sbjct: 359 QSGNMERAEELVREMEEDGIDAPIDVYHSMMHGY 392
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 74/198 (37%), Gaps = 53/198 (26%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
F +I +++ D A M G+EP+A +T L+ YA
Sbjct: 245 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYA---------------- 288
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
V+ DM A + M GLE + TY+ L+ G+AK D
Sbjct: 289 -------------------VARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQ 329
Query: 282 SVRRLLAQSGSSL--VNG-DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
S L ++ + L +NG Y +IIHA SG+ E +E+ M
Sbjct: 330 SADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVR---------------EME 374
Query: 339 QAGLEPSAQTYTKLMCGY 356
+ G++ Y +M GY
Sbjct: 375 EDGIDAPIDVYHSMMHGY 392
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 24/171 (14%)
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
+PS + + ++ YAK GD R + + + + ++HA AV+ D
Sbjct: 239 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR-----DM 293
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL- 376
A+ C M GLE + TY+ L+ G+AK D S L + + L
Sbjct: 294 RGALSCVEE----------MKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLS 343
Query: 377 -VNGD-YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
+NG Y +IIHA SG+ E +E++ +++ DA +YH + G
Sbjct: 344 SLNGIIYSNIIHAHCQSGNMERAEELVREMEED---GIDAPIDVYHSMMHG 391
>gi|224119538|ref|XP_002318099.1| predicted protein [Populus trichocarpa]
gi|222858772|gb|EEE96319.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 120/284 (42%), Gaps = 59/284 (20%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI +C +G + A I M + + ++N L+ +S++N + AEG+ + M G
Sbjct: 52 LIKSFCDEGLKKEALIIQTEMERRGISSNAIIYNTLMDSYSKSNQIEEAEGLYSEMQAKG 111
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
L+P++ T+ LM Y++ D I E
Sbjct: 112 LKPTSATFNILMDAYSRRMQPDII-----------------------------------E 136
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-----DSVRRLLAQSGSSLVNGDYLDIIH 304
+L M AGL P+A++YT L+ Y + M D+ R+ ++G + Y +IH
Sbjct: 137 KLLLEMQDAGLAPNAKSYTCLISAYGRQKKMSDMAADAFLRM-KKAGIKPTSYSYTALIH 195
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
A +VSG E A + F N M + G++PS +TYT L+ + + GD +
Sbjct: 196 AYSVSGWHE-----KAYITFEN----------MQREGIKPSIETYTTLLDAFRRAGDTKT 240
Query: 365 ---IRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
I +L+ + + ++ A GH ++I++ +
Sbjct: 241 LMDIWKLMMREKVEGTRVTFNILLDGFAKQGHYMEARDVINEFK 284
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 128/314 (40%), Gaps = 42/314 (13%)
Query: 88 ALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL 147
AL++ + D ++E +GI N + Y L+ + Y + IE A +
Sbjct: 51 ALIKSFCDEGLKKEALIIQTEMERRGISSNAIIYNTLMDS------YSKSNQIEEAEGLY 104
Query: 148 EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 207
M+ K + FN L+ +S+ E +L M AGL P+A++YT L+ Y +
Sbjct: 105 SEMQAKGLKPTSATFNILMDAYSRRMQPDIIEKLLLEMQDAGLAPNAKSYTCLISAYGRQ 164
Query: 208 GDMDS------IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM--MSQAG 259
M ++ K +KP S + T L+ S + +T M + G
Sbjct: 165 KKMSDMAADAFLRMKKAGIKPTS-------YSYTALIHAYSVSGWHEKAYITFENMQREG 217
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYID 316
++PS +TYT L+ + + GD ++ + V G + ++ A GH Y++
Sbjct: 218 IKPSIETYTTLLDAFRRAGDTKTLMDIWKLMMREKVEGTRVTFNILLDGFAKQGH--YME 275
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
I F + GL P+ TY LM YA+ G + +LL + +
Sbjct: 276 ARDVINEF-------------KKFGLHPTVMTYNMLMNAYARGGQDSKLPQLLKEMATLK 322
Query: 377 VNGD---YLDIIHA 387
+ D Y +I+A
Sbjct: 323 LEPDSITYTTMIYA 336
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 104/272 (38%), Gaps = 27/272 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS---NSKLISKYCQDGNIEG 142
+N L+ Y L +++ G+ PN +Y LIS K +S D
Sbjct: 119 FNILMDAYSRRMQPDIIEKLLLEMQDAGLAPNAKSYTCLISAYGRQKKMSDMAADA---- 174
Query: 143 ATKILEFMRDKTFPI--SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
F+R K I + + ALI+ +S + A M + G++PS +TYT L
Sbjct: 175 ------FLRMKKAGIKPTSYSYTALIHAYSVSGWHEKAYITFENMQREGIKPSIETYTTL 228
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ + + GD ++ + + +F + A ++ + GL
Sbjct: 229 LDAFRRAGDTKTLMDIWKLMMREKVEGTRVTFNILLDGFAKQGHYMEARDVINEFKKFGL 288
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
P+ TY LM YA+ G + +LL + + + D + Y + A
Sbjct: 289 HPTVMTYNMLMNAYARGGQDSKLPQLLKEMATLKLEPDSIT------------YTTMIYA 336
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
V + + MM ++G P A++Y KL
Sbjct: 337 YVRVRDFRRAFFYHKMMVKSGKVPDAKSYQKL 368
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 151/358 (42%), Gaps = 42/358 (11%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N+LL+ L++E DFL +++SQG+ N S IS YC GNI+ K+
Sbjct: 190 NSLLKALLESEQLNLAWDFLKEMKSQGLGLNASII------SLFISGYCSQGNIDTGWKL 243
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
L M+ + +I + + + A IL M+Q G+ + + + ++ GY K
Sbjct: 244 LMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCK 303
Query: 207 HGD----MDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
G MD + ++ +L P +F F +L +M A + M + GL P
Sbjct: 304 VGKSEEAMDVL--EVFNLSPNIFVFNSFISKLC-----TDGNMLKAAKVFQDMCEMGLIP 356
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
+YT +M GY K D+ + + L + G Y +I + G+ E +
Sbjct: 357 DCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAE--- 413
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG 379
+L M+++ GL P +Y LM GY K G + LL+ S+ V+
Sbjct: 414 -----------YLFQRMITE-GLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSP 461
Query: 380 D---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA---NHIYHLINKGQIDAAY 431
D Y +IH L G +I+ ++ G+S D N I NKG + A+
Sbjct: 462 DLVTYNILIHGLIKRGLVNEAKDILDELTRR-GFSPDVVTFTNIIGGFSNKGNFEEAF 518
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 138/339 (40%), Gaps = 51/339 (15%)
Query: 43 VLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSP 102
+ +F SK C++ GN+ E+ + D Y ++ Y + +
Sbjct: 323 IFVFNSFISKLCTD-----GNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNA 377
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV- 161
+L K+ +GI P+ TY LI + C+ GN+E A + + M I+EG+
Sbjct: 378 LKYLGKMLKRGIRPSVATYTLLIDSC------CKPGNMEMAEYLFQRM------ITEGLV 425
Query: 162 -----FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTK 216
+N L+ G+ + + A +L+MM AG+ P TY L+ G K G ++ K
Sbjct: 426 PDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDI 485
Query: 217 IPSLKPQSELFLCFS---FQLTNLLILVSSDMASAEGILTM--MSQAGLEPSAQTYTKLM 271
+ L + FS TN++ S+ E L MS+ LEP T + L+
Sbjct: 486 LDELTRRG-----FSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALL 540
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNIC 328
GY + M L + + + D Y +IH G+ ID+ +V
Sbjct: 541 NGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGN---IDDACHLV------ 591
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
MM + G+ P+ T+ L+ GY K + + R
Sbjct: 592 ------SMMIEHGIMPNNITHHALVLGYEKKCVENPVER 624
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 145/343 (42%), Gaps = 41/343 (11%)
Query: 130 LISKYCQDGNIEGATKILEFMRD-KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
L++ Y ++ + A K++ MR FP+ GV N+L+ ++ + A L M
Sbjct: 157 LVNCYVKENMTQVALKLICKMRHLNIFPLI-GVCNSLLKALLESEQLNLAWDFLKEMKSQ 215
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDS-----IKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
GL +A + + GY G++D+ ++ K +KP + ++ + +L + S
Sbjct: 216 GLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPD---VVAYTIVIDSLCKM--S 270
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII 303
+ A IL M+Q G+ + + + ++ GY K G + +L S + I
Sbjct: 271 LLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFI 330
Query: 304 HALAVSGHGEYIDEVSAIVCFVNI---CFHWLE------------------GPMMSQAGL 342
L G+ +V +C + + CF + G M+ + G+
Sbjct: 331 SKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKR-GI 389
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDE 399
PS TYT L+ K G+M+ L + + + D Y +++ GH + E
Sbjct: 390 RPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFE 449
Query: 400 IISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLAR 439
++S ++ G S D + I+ LI +G ++ A I++ L R
Sbjct: 450 LLSMMRSA-GVSPDLVTYNILIHGLIKRGLVNEAKDILDELTR 491
>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
Length = 901
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 24/280 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D + YN L+ + + L K++ + ++P+ ++ +I Y G+++
Sbjct: 508 DRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEG------YAVAGDMK 561
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A L+ MR + +NALI+G + + + A +L MS AG+ P+ TYT +M
Sbjct: 562 SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 621
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYA GD+ +K + ++ S M SA + MS +
Sbjct: 622 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 681
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
+ Y L+ G+A+ GD+ L+ Q V + Y I+A +G + ++V
Sbjct: 682 RNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKV 741
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
M GL+P+ +TYT L+ G+A+
Sbjct: 742 IE---------------EMVDVGLKPNVKTYTTLIKGWAR 766
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 111/282 (39%), Gaps = 64/282 (22%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G++P+R Y + LI +C+ GN++ A ILE M+ + S F +I G++ A
Sbjct: 504 GLQPDRAIY------NLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVA 557
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
DM SA L +M ++G P+ TY L+ G + K K+
Sbjct: 558 GDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVR-------KHKV--------------- 595
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
A +L MS AG+ P+ TYT +M GYA GD+ +
Sbjct: 596 -------------QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKE 642
Query: 293 SLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFH-----------------WL 332
S + D Y ++ A SG + V+ + F I + W
Sbjct: 643 SGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWE 702
Query: 333 EGPMMSQA---GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+M Q G+ P+ TYT + K GDM +++ +
Sbjct: 703 AEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEE 744
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 61/289 (21%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
+D P+D+ Y++++ Y ++ +L+ G +P+ +IS L++ Y +
Sbjct: 400 IDAPIDV--YHSMMHGYTIIQNENKCLVVFERLKECGFKPS------IISYGCLLNLYVK 451
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G + A I + M + ++ LI G +D A+A I M ++GL+P
Sbjct: 452 IGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAI 511
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y L+ + K G+MD +C IL M
Sbjct: 512 YNLLIEAFCKMGNMDRA--------------IC---------------------ILEKMQ 536
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
+ ++PS + + ++ GYA GDM S L+ +SG Y +IH L V H
Sbjct: 537 KERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL-VRKH-- 593
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+V V ++ MS AG+ P+ TYT +M GYA GD+
Sbjct: 594 ---KVQRAVSVLD---------KMSIAGITPNEHTYTIIMRGYAASGDI 630
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + LD+ Y LLR + S ++ Q I N Y LI +
Sbjct: 642 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDG------WA 695
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G++ A +++ M++ P + + + I +A DM AE ++ M GL+P+ +
Sbjct: 696 RRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVK 755
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL 238
TYT L+ G+A+ D + K+ LKP + C +T+LL
Sbjct: 756 TYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCL---VTSLL 800
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G+ A E MR + + VF +L++ ++ A DM A + M G
Sbjct: 270 MIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEG 329
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS-------IKTKIPSLKPQSELFLCFSFQLTNLL--IL 240
LE + TY+ L+ G+AK D S KTK+ SL +N++
Sbjct: 330 LELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLN---------GIIYSNIIHAHC 380
Query: 241 VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
S +M AE ++ M + G++ Y +M GY
Sbjct: 381 QSGNMERAEELVREMEEDGIDAPIDVYHSMMHGY 414
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 74/198 (37%), Gaps = 53/198 (26%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
F +I +++ D A M G+EP+A +T L+ YA
Sbjct: 267 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYA---------------- 310
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
V+ DM A + M GLE + TY+ L+ G+AK D
Sbjct: 311 -------------------VARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQ 351
Query: 282 SVRRLLAQSGSSL--VNG-DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
S L ++ + L +NG Y +IIHA SG+ E +E+ M
Sbjct: 352 SADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVR---------------EME 396
Query: 339 QAGLEPSAQTYTKLMCGY 356
+ G++ Y +M GY
Sbjct: 397 EDGIDAPIDVYHSMMHGY 414
Score = 47.0 bits (110), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 24/171 (14%)
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
+PS + + ++ YAK GD R + + + + ++HA AV+ D
Sbjct: 261 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR-----DM 315
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL- 376
A+ C M GLE + TY+ L+ G+AK D S L + + L
Sbjct: 316 RGALSCVEE----------MKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLS 365
Query: 377 -VNGD-YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
+NG Y +IIHA SG+ E +E++ +++ DA +YH + G
Sbjct: 366 SLNGIIYSNIIHAHCQSGNMERAEELVREMEED---GIDAPIDVYHSMMHG 413
>gi|90399139|emb|CAJ86163.1| H0913C04.4 [Oryza sativa Indica Group]
gi|125550286|gb|EAY96108.1| hypothetical protein OsI_17985 [Oryza sativa Indica Group]
Length = 900
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 118/280 (42%), Gaps = 24/280 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D + YN L+ + + L K++ + ++P+ ++ +I Y G+++
Sbjct: 507 DRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEG------YAVAGDMK 560
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A L+ MR + +NALI+G + + + A +L MS AG+ P+ TYT +M
Sbjct: 561 SALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIM 620
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYA GD+ +K + ++ S M SA + MS +
Sbjct: 621 RGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIP 680
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
+ Y L+ G+A+ GD+ L+ Q V + Y I+A +G + ++V
Sbjct: 681 RNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKV 740
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
M GL+P+ +TYT L+ G+A+
Sbjct: 741 IE---------------EMVDVGLKPNVKTYTTLIKGWAR 765
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 110/282 (39%), Gaps = 64/282 (22%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G++P+R Y LI +C+ GN++ A ILE M+ + S F +I G++ A
Sbjct: 503 GLQPDRAIYNLLIE------AFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVA 556
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
DM SA L +M ++G P+ TY L+ G + K K+
Sbjct: 557 GDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVR-------KHKV--------------- 594
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
A +L MS AG+ P+ TYT +M GYA GD+ +
Sbjct: 595 -------------QRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKE 641
Query: 293 SLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFH-----------------WL 332
S + D Y ++ A SG + V+ + F I + W
Sbjct: 642 SGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWE 701
Query: 333 EGPMMSQA---GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+M Q G+ P+ TYT + K GDM +++ +
Sbjct: 702 AEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEE 743
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 119/289 (41%), Gaps = 61/289 (21%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
+D P+D+ Y++++ Y ++ +L+ G +P+ +IS L++ Y +
Sbjct: 399 IDAPIDV--YHSMMHGYTIIQNENKCLVVFERLKECGFKPS------IISYGCLLNLYVK 450
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G + A I + M + ++ LI G +D A+A I M ++GL+P
Sbjct: 451 IGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAI 510
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y L+ + K G+MD +C IL M
Sbjct: 511 YNLLIEAFCKMGNMDRA--------------IC---------------------ILEKMQ 535
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
+ ++PS + + ++ GYA GDM S L+ +SG Y +IH L V H
Sbjct: 536 KERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGL-VRKH-- 592
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+V V ++ MS AG+ P+ TYT +M GYA GD+
Sbjct: 593 ---KVQRAVSVLD---------KMSIAGITPNEHTYTIIMRGYAASGDI 629
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 14/168 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + LD+ Y LLR + S ++ Q I N Y LI +
Sbjct: 641 ESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDG------WA 694
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G++ A +++ M++ P + + + I +A DM AE ++ M GL+P+ +
Sbjct: 695 RRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVK 754
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL 238
TYT L+ G+A+ D + K+ LKP + C +T+LL
Sbjct: 755 TYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCL---VTSLL 799
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 18/154 (11%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G+ A E MR + + VF +L++ ++ A DM A + M G
Sbjct: 269 MIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEG 328
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS-------IKTKIPSLKPQSELFLCFSFQLTNLL--IL 240
LE + TY+ L+ G+AK D S KTK+ SL +N++
Sbjct: 329 LELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLN---------GIIYSNIIHAHC 379
Query: 241 VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
S +M AE ++ M + G++ Y +M GY
Sbjct: 380 QSGNMERAEELVCEMEEDGIDAPIDVYHSMMHGY 413
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 76/198 (38%), Gaps = 53/198 (26%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
F +I +++ D A M G+EP+A +T L+ YA
Sbjct: 266 FGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYA---------------- 309
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
V+ DM A + M GLE + TY+ L+ G+AK D
Sbjct: 310 -------------------VARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQ 350
Query: 282 SVRRLLAQSGSSL--VNG-DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
S L ++ + L +NG Y +IIHA SG+ E +E +VC M
Sbjct: 351 SADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEE---LVC------------EME 395
Query: 339 QAGLEPSAQTYTKLMCGY 356
+ G++ Y +M GY
Sbjct: 396 EDGIDAPIDVYHSMMHGY 413
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 24/171 (14%)
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
+PS + + ++ YAK GD R + + + + ++HA AV+ D
Sbjct: 260 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAR-----DM 314
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL- 376
A+ C M GLE + TY+ L+ G+AK D S L + + L
Sbjct: 315 RGALSCVEE----------MKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLS 364
Query: 377 -VNGD-YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
+NG Y +IIHA SG+ E +E++ +++ DA +YH + G
Sbjct: 365 SLNGIIYSNIIHAHCQSGNMERAEELVCEMEED---GIDAPIDVYHSMMHG 412
>gi|222635128|gb|EEE65260.1| hypothetical protein OsJ_20463 [Oryza sativa Japonica Group]
Length = 1443
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 39/293 (13%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS--AEGILTMMSQ 187
++ Y + G + A ++L+ MRD+ FN LI +++ +A+ A +L + Q
Sbjct: 227 MMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQ 286
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILV--- 241
AGL P A TY L+ ++ ++D ++ ++ + + + +L+ N ++ V
Sbjct: 287 AGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWT------YNAMVSVHGR 340
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGD 298
AE + + + G +P A TY L+ +AK GD++ V R+ L ++G
Sbjct: 341 CGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGIT 400
Query: 299 YLDIIHALAVSGH-----GEYIDEVSAIVCFVNICFHWLE----GPM------------M 337
Y +IH G G Y DE+ AI C + + + G M M
Sbjct: 401 YNTMIHMYGKMGRLDLALGLY-DEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM 459
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAV 390
+ AGL+P+ T++ L+C YAK G D R + S V D L + L V
Sbjct: 460 ADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDV 512
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 109/297 (36%), Gaps = 53/297 (17%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L ++ G+ P+ +TY LIS Q N++ A + E M +N
Sbjct: 279 ELLHEVRQAGLRPDAITYNTLISACS------QGSNLDDAVAVFEEMIASECRPDLWTYN 332
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK--------- 214
A++ H + AE + + + G +P A TY L+ +AK GD++ ++
Sbjct: 333 AMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKA 392
Query: 215 ----------TKIPSLKPQSELFLCFSF-----------QLTNLLILVSS-----DMASA 248
T I L L +LV S ++ A
Sbjct: 393 GFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEA 452
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
+L M+ AGL+P+ T++ L+C YAK G D R + S V D L + L V
Sbjct: 453 GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDV 512
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
DE ++ M + G +P Y L+ AK + D I
Sbjct: 513 FARS---DETRKLMVLYRA---------MIKDGYKPDDGLYQVLLAALAKGNEHDEI 557
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 25/214 (11%)
Query: 74 TGELDVPLDISH-------------YNALLRVYLDNEHTFSPTD---FLAKLESQGIEPN 117
TG D +++ H YN L+ +Y N F P + L ++ +G+ P
Sbjct: 935 TGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRN---FRPEEGFTLLYEMGKRGLTPK 991
Query: 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS 177
+Y+ L++ S + E A + E MR K + ++ +++ ++ + A + +
Sbjct: 992 LESYKILLAASGKAKLW------EQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSK 1045
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
AE +L+ M + G+EP+ T LM Y G D + + SLK + +
Sbjct: 1046 AEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLD 1105
Query: 238 LILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
L + D + L M + G+EP Q +T +
Sbjct: 1106 AYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFI 1139
>gi|388499386|gb|AFK37759.1| unknown [Lotus japonicus]
Length = 500
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 154/352 (43%), Gaps = 35/352 (9%)
Query: 82 DISHYNALLRVYLDNE-HTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ YN L+ + + + + +L LE++ I PN TY + LI YC G +
Sbjct: 161 DVICYNLLIDAFGQKFLYKEAESTYLQLLEARCI-PNEDTY------ALLIKAYCLSGLL 213
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A + M++ P S V+N+ I G + + AE I M + G +PS +TYT L
Sbjct: 214 EKAEAVFVEMKNYGLPSSAVVYNSYINGLMKGGNPNKAEEIFLRMKRDGCKPSTETYTML 273
Query: 201 MCGYAKHG-DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
+ Y K G ++K L + + +C L N AE + M +AG
Sbjct: 274 INLYGKDGKSFMALKVFNEMLSHKCKPNICTYTALVNAFAR-EGLCEKAEEVFEQMQEAG 332
Query: 260 LEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
LEP +Y LM Y++ G + L+ G Y ++ A +G +++
Sbjct: 333 LEPDVYSYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNILVDAYGRAG---FLN 389
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
+ A+ M + G+ P+ +++ L+ ++K G++ +L Q S
Sbjct: 390 DAEAVF------------EDMKRVGITPTMKSHMVLLSAFSKTGNVSKCEDILNQMCKSG 437
Query: 377 VNGDYLDIIHALAVSGH-GEY--IDEIISKIQPGVGYSADAANHIYH-LINK 424
+ D + L + G G++ ++E+++ ++ G S +A Y+ LIN+
Sbjct: 438 LKLDTFVLNSMLNLYGRLGQFGKMEEVLTVMENG---SCEADISTYNILINR 486
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 90/208 (43%), Gaps = 10/208 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I Y AL+ + + +++ G+EP+ +Y + L+ Y + G
Sbjct: 301 NICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYSY------NALMEAYSRAGFPY 354
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA +I M+ +N L+ + +A + AE + M + G+ P+ +++ L+
Sbjct: 355 GAAEIFSLMQHMGCEPDRASYNILVDAYGRAGFLNDAEAVFEDMKRVGITPTMKSHMVLL 414
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS--SDMASAEGILTMMSQAG 259
++K G++ + + + +S L L +F L ++L L E +LT+M
Sbjct: 415 SAFSKTGNVSKCEDILNQM-CKSGLKL-DTFVLNSMLNLYGRLGQFGKMEEVLTVMENGS 472
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
E TY L+ Y + G +D + L
Sbjct: 473 CEADISTYNILINRYGQAGFIDKMEGLF 500
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 121/298 (40%), Gaps = 34/298 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y L++ +++ LA+++ G+ N TY LI+ ++ + C+ G
Sbjct: 455 NVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVG--- 511
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
++L+ + F + +N++I G +A M SA + M G+ P+ TYT +
Sbjct: 512 ---EMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFI 568
Query: 202 CGYAKHGDMD-SIK----TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
GY K D ++K + L+P + F +M+ A +L +M
Sbjct: 569 DGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQ-----EGNMSHALQVLVLML 623
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGE 313
+ GL P+ Y + GY M+ RL + + G L Y +I + G
Sbjct: 624 KDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDG--- 680
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
N+ F M G P T+T L G ++GD+D R+LL +
Sbjct: 681 ------------NVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDE 726
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/372 (20%), Positives = 140/372 (37%), Gaps = 41/372 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L+ + K+ G++P VTY L+ YC +G ++
Sbjct: 385 DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLC------YCVNGCMD 438
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ M K F + + L+ GH A +L M Q G+ + TY L+
Sbjct: 439 EAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLI 498
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAG 259
G G + + + ++E F+ + +++ + + M SA + M G
Sbjct: 499 NGLCVVGRVCEVGEMLKRF--ETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKG 556
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYID 316
+ P+ TYT + GY K D ++L + D Y +I G+ +
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHAL 616
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNG 373
+V + M + GL P+ Y + GY M+ RL + + G
Sbjct: 617 QVLVL---------------MLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEG 661
Query: 374 SSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHI------YHLINKGQI 427
L Y +I + G+ + ++ S++ + +HI + L G I
Sbjct: 662 IDLDTATYTTLIDGFSKDGNVTFALKLYSEMVA----KGNIPDHITFTALTHGLCRNGDI 717
Query: 428 DAAYRIVNTLAR 439
D A ++++ + R
Sbjct: 718 DDARKLLDEMNR 729
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P +I Y + + Y L + +G+ P+ Y LI +CQ+G
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFG------FCQEG 610
Query: 139 NIEGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
N+ A ++L M +D P + V+N+ I G+ M A + M + G++ TY
Sbjct: 611 NMSHALQVLVLMLKDGLLP-NISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATY 669
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
T L+ G++K G++ + + + +F + + D+ A +L M++
Sbjct: 670 TTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNR 729
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+ P+ Y L+ GY ++G + RL
Sbjct: 730 LDIRPNVLMYNMLINGYLRNGKLQEAFRL 758
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 103/273 (37%), Gaps = 43/273 (15%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D + G+ P VTY LI ++G E A ++ MRD S FN
Sbjct: 303 DIFEETLRDGLVPTDVTYTVLIRGCT------EEGMPEKAYELCRQMRDHGLLPSTNEFN 356
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSIKTKI--- 217
+I G A + M+ +G+ P A TY L +C K + ++ K+
Sbjct: 357 MVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNET 415
Query: 218 ---PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
P + L LC+ V+ M A + T M G P+ TYT LM G+
Sbjct: 416 GVKPYIVTYHSLLLCYC---------VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGH 466
Query: 275 AKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
D LLA Q+G S + Y +I+ L V G VC V
Sbjct: 467 INKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGR----------VCEVGEMLKR 516
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
E G P+A TY ++ G+ K G M S
Sbjct: 517 FE-----TEGFVPTAMTYNSIINGFIKAGMMGS 544
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 130/304 (42%), Gaps = 39/304 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 198 RLKSAMLASGVQPDVYT-YSVLINGL--CKESKMDGANELFDEMLVKGLVPNGVTFTTLI 254
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I+ L G + IDE
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE------- 307
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+D+ R+ + Q L + Y
Sbjct: 308 ------------MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 355
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG D + I KG + +++ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLS-VGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMH 414
Query: 439 RSAN 442
R +
Sbjct: 415 RDGH 418
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 211 DVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTF------TTLIDGHCKNGRVD 264
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 324
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE +L M GL+
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ + K GD+ +LL +
Sbjct: 385 PDTGTYTMIINEFCKKGDVWKGSKLLKE 412
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 110/280 (39%), Gaps = 53/280 (18%)
Query: 130 LISKYCQDGNIEGATKIL-----------------------------EFMRDKTFPISEG 160
L+ ++C+DG+I A + E R K+ ++ G
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207
Query: 161 V------FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
V ++ LI G + + M A + M GL P+ T+T L+ G+ K+G +D
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 267
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+ QS L ++ + D+ A ++ MS GL+P TYT L+ G
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGC 327
Query: 275 AKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
K GD+D+ R+ + Q L + Y +I L G +D +
Sbjct: 328 CKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS--VDAEKML---------- 375
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M GL+P TYT ++ + K GD+ +LL +
Sbjct: 376 ---REMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 412
>gi|255551050|ref|XP_002516573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544393|gb|EEF45914.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 396
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 97/206 (47%), Gaps = 6/206 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN + Y+ NE T + ++++++ G++PN T +IS YC++G I+
Sbjct: 9 DVVTYNTIATAYVRNEETNLAEEMISEMQNTGVQPNERTC------GTVISGYCKEGRIK 62
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M++ + VFN+LI G D + +L +M + ++P T++ +M
Sbjct: 63 EALRFVHRMKELGVHPNLVVFNSLIKGFVDIMDRNGVDEVLKLMEEFNVKPDVITFSTIM 122
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
++K G M+ + + ++ + + + + AE +LT M ++G
Sbjct: 123 NAWSKAGYMNKCREIFDDMMKAGIQPDGHAYSILAKGYVRAQEPEKAEQLLTTMMESGFH 182
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL 287
P+ +T ++ G+ MD R+
Sbjct: 183 PNVVIFTTVISGWCSTDRMDCAIRVF 208
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 91/215 (42%), Gaps = 12/215 (5%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V ++ +N+L++ ++D + L +E ++P+ +T+ S +++ +
Sbjct: 73 ELGVHPNLVVFNSLIKGFVDIMDRNGVDEVLKLMEEFNVKPDVITF------STIMNAWS 126
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G + +I + M ++ L G+ +A + AE +LT M ++G P+
Sbjct: 127 KAGYMNKCREIFDDMMKAGIQPDGHAYSILAKGYVRAQEPEKAEQLLTTMMESGFHPNVV 186
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA---SAEGIL 252
+T ++ G+ MD I E + + + LI S+ AE IL
Sbjct: 187 IFTTVISGWCSTDRMDC---AIRVFDKMCEYGISPNLKTFETLIGGFSEAKQPWKAEDIL 243
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+M + +EP T + + G V R+L
Sbjct: 244 QIMREYNVEPKKSTMLLVAEAWGSIGLTKEVNRIL 278
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 148/363 (40%), Gaps = 41/363 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN++L Y + L K+ S G+EPN VTY S L++ C++G
Sbjct: 243 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY------SSLMNYLCKNGRST 296
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A KI + M + + L+ GH + + +E + +M + G++P TY L+
Sbjct: 297 EARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLI 356
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
G G MD + S+ KP + L N VS M A + M
Sbjct: 357 DGCCLAGKMDEATKLLASMVSVGVKPDIVTY----GTLINGYCRVSR-MDDALALFKEMV 411
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGE 313
+G+ P+ TY ++ G + + L + +SG+ L Y I+H L
Sbjct: 412 SSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLC---KNN 468
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
DE A+ F N+C L+ +T+ ++ K G MD + L A +
Sbjct: 469 LTDE--ALRMFQNLCL----------TDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHS 516
Query: 374 SSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA---NHIYHLINKGQI 427
++ + D Y + L G E +D++ ++ G SAD+ + + L+ +G I
Sbjct: 517 ANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEEN-GCSADSRMLNSIVRKLLQRGDI 575
Query: 428 DAA 430
A
Sbjct: 576 TRA 578
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 142/381 (37%), Gaps = 47/381 (12%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDF-LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
+D + LL+ ++ T D L ++ G P+ +Y L+ C +
Sbjct: 125 VDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKG------LCDENR 178
Query: 140 IEGATKILEFMRDKTF-----------PISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
+ A ++L M D + G F I A M A +L M +
Sbjct: 179 SQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKN 238
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKP-QSELFLCFSFQLTNLLILVSSDMAS 247
G+ P TY ++ GY G K I +LK +S+ ++L+ + + S
Sbjct: 239 GVMPDCMTYNSILHGYCSSG---QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRS 295
Query: 248 AEG--ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDI 302
E I M++ GLEP TY L+ G+ K G + +L V D Y +
Sbjct: 296 TEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 355
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
I ++G +DE + ++ M G++P TY L+ GY + M
Sbjct: 356 IDGCCLAGK---MDEATKLL------------ASMVSVGVKPDIVTYGTLINGYCRVSRM 400
Query: 363 DSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEI-ISKIQPGVGYSADAANHI 418
D L + SS V+ + Y I+ L + E+ +S + G N I
Sbjct: 401 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNII 460
Query: 419 YHLINKGQI-DAAYRIVNTLA 438
H + K + D A R+ L
Sbjct: 461 LHGLCKNNLTDEALRMFQNLC 481
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 147/343 (42%), Gaps = 49/343 (14%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K++ G+ PN TY +++ ++C+DG + A K+ + MR++ + +N LI
Sbjct: 258 KMQEDGVFPNLYTYNCVMN------QHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIG 311
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G + A ++ M G+ P+ TY L+ G+ G + + LK +
Sbjct: 312 GLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG--- 368
Query: 228 LCFSFQLTNLLILVS-----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
S L ILVS D + A ++ M + G++PS TYT L+ +A+ +M+
Sbjct: 369 --LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEK 426
Query: 283 ---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+R + + G + Y +IH + G ++E S + +M
Sbjct: 427 AIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQ---MNEASRLF------------KLMVA 471
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDE 399
LEP+ Y ++ GY K G RL + + + V+ + Y+ E
Sbjct: 472 KKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPN---------VASY-RYMIE 521
Query: 400 IISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSAN 442
++ K + S +A + +I+ G ID + I+N ++R+ N
Sbjct: 522 VLCKERK----SKEAEGLVEKMIDTG-IDPSDSILNLISRAKN 559
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 168/439 (38%), Gaps = 49/439 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
++ V LD+ + +++ + D L +L G PN V Y LI C
Sbjct: 156 KIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGC------C 209
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G IE A + M +E + LI+G + + M + G+ P+
Sbjct: 210 KRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLY 269
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG--ILT 253
TY +M + K G ++ + C L+ + +M + E ++
Sbjct: 270 TYNCVMNQHCKDGRTKDAFKLFDEMRERG--VSCNIVTYNTLIGGLCREMKANEANKVMD 327
Query: 254 MMSQAGLEPSAQTYTKLM---CGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA--- 307
M G+ P+ TY L+ CG K G S+ R L G S Y ++
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKG 387
Query: 308 -VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 364
SG G+ + E M + G++PS TYT L+ +A+ +M+
Sbjct: 388 DTSGAGKVVKE-------------------MEERGIKPSKITYTILIDTFARMDNMEKAI 428
Query: 365 -IRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN 423
+R + + G + Y +IH + G ++E + V + IY+ +
Sbjct: 429 QLRSPMEELGLTPDVHTYSVLIHGFCIKGQ---MNEASRLFKLMVAKKLEPNKVIYNTMV 485
Query: 424 KGQID--AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLIN 481
G ++YR + + ++LP R+M++ S +A + +I+
Sbjct: 486 LGYCKEGSSYRALRLFRE---MEEKELPPNVASYRYMIEV-LCKERKSKEAEGLVEKMID 541
Query: 482 KGQIDAAYRIVNTLARSAN 500
G ID + I+N ++R+ N
Sbjct: 542 TG-IDPSDSILNLISRAKN 559
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 138/341 (40%), Gaps = 66/341 (19%)
Query: 35 LGAFLVLLVLLFVYLNSKWCSEPSLGPGNLP-CEDPFSVHTGELDVPLDISHYNALLRVY 93
L A L V +F L +K+C E GN+ + F T P +S +N L+ Y
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKE-----GNISDAQKVFDEITKRSLQPTVVS-FNTLINGY 285
Query: 94 LDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDK 153
+ ++E P+ TY S LI+ C++ ++GA + + M +
Sbjct: 286 CKVGNLDEGFRLKHQMEKSRTRPDVFTY------SALINALCKENKMDGAHGLFDEMCKR 339
Query: 154 TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 213
++ +F LI+GHS+ ++ + M GL+P Y L+ G+ K+G
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNG----- 394
Query: 214 KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCG 273
D+ +A I+ M + GL P TYT L+ G
Sbjct: 395 ------------------------------DLVAARNIVDGMIRRGLRPDKITYTTLIDG 424
Query: 274 YAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFH 330
+ + GD+++ +R+ + Q+G L + ++ + G ID A+
Sbjct: 425 FCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMC--KEGRVIDAERAL--------- 473
Query: 331 WLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M +AG++P TYT +M + K GD + +LL +
Sbjct: 474 ----REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 10/200 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN L+ + N + + + + +G+ P+++TY + LI +C+ G++E
Sbjct: 379 DIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY------TTLIDGFCRGGDVE 432
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M + F+AL+ G + + AE L M +AG++P TYT +M
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMM 492
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSEL--FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
+ K GD + + ++ + + ++ L L L M +A+ +L M G
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL--GQMKNADMLLDAMLNIG 550
Query: 260 LEPSAQTYTKLMCGYAKHGD 279
+ P TY L+ G+ +H +
Sbjct: 551 VVPDDITYNTLLEGHHRHAN 570
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 124/299 (41%), Gaps = 25/299 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y+ L+ + + L ++ G +PN VTY L+S C+ G ++
Sbjct: 86 NVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSG------LCKMGKLK 139
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M + P V+N LI G S+ DM A + M + G P+ TY L+
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAG 259
G+++ G+ +++ + Q + F+F NLL DM A + M G
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTF--NNLLDGFCKMGDMVEAHRLFLEMRSLG 257
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
P +Y L+ G G +RLL + S V D + + + + G+ +
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVS--YNILIDGYSKSGALDH 315
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSIRRLLAQNGSS 375
AI F I ++GLEP A +Y+ + +C K G + + + NGS+
Sbjct: 316 AIKLFYEI----------PKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSA 364
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 131/301 (43%), Gaps = 31/301 (10%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ +T L+
Sbjct: 198 RLKSAMLASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLVKGLVPNGVIFTTLI 254
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNIC 328
G+ K+G +D + Q S + D Y +I+ L G + +V ++
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGD---LKQVHHLI------ 305
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDYLDII 385
MS GL+P TYT L+ G K GD+D+ R+ + Q L Y +I
Sbjct: 306 ------DEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALI 359
Query: 386 HALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSAN 442
L G ++++ ++ VG DA + I KG + +++ + R +
Sbjct: 360 SGLCQEGRSVDAEKMLREML-NVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGH 418
Query: 443 I 443
+
Sbjct: 419 V 419
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN V + + LI +C++G ++
Sbjct: 211 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIF------TTLIDGHCKNGRVD 264
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ ++ MS GL+P TYT L+
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLI 324
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE +L M GL+
Sbjct: 325 DGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLK 384
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P A+TYT ++ + K GD+ +LL +
Sbjct: 385 PDARTYTMIINEFCKKGDVWKGSKLLKE 412
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 120/556 (21%), Positives = 227/556 (40%), Gaps = 63/556 (11%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D L ++ S G PNRV Y +IS+ C +G A K++E MR+ FN
Sbjct: 209 DLLDEMRSSGALPNRVAYNTVISS------LCGEGQTVEAEKLVEKMREVGLSPDIVTFN 262
Query: 164 ALIYGHSQANDMASAEGILTMM---SQAGL-EPSAQTYTKLMCGYAKHGDMDSIKTKIPS 219
I ++ + A I M + GL +P+ TY ++ G+ G + + S
Sbjct: 263 CRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDS 322
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG- 278
+K SE S+ + L ++ S + A IL M++ ++P+ +Y L+ G K+G
Sbjct: 323 MK-NSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGM 381
Query: 279 --DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM 336
D S+ L+ +SG + Y ++H G I E + ++
Sbjct: 382 FSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGK---ILEANYVL------------RE 426
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
M Q G P+ T L+ K G + + + +++ + G L N +I+ L +G+
Sbjct: 427 MIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGN 486
Query: 394 GEYIDEIISKI----QPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLP 449
+ EI+S + +G ++ ++ + N G+ + + A I G
Sbjct: 487 LDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGK-----KCLPDSITYATIIGGLCK 541
Query: 450 VGGFLVRHMVKTNQPGVGYSADAA---NHIYHLINKGQIDAAYRIVNTLARSANINGEQL 506
VG G S D+ IY+ +G++ +A+R++ + + + L
Sbjct: 542 VGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKG--CNKSL 599
Query: 507 PVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFN----LAVLIKAHVLKEDYTGAV 562
L++ + NQ I ++ + + + + P + ++ L + LK+
Sbjct: 600 RTYNSLIQGLGSENQ-IFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLD 658
Query: 563 ETFEYCVN----QFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEVNSLYDLMLSF 618
E + ++ FR L+ F +A D Q + +++ S+ G SLY M +
Sbjct: 659 EMLQKGISPNIYTFRI------LIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNE 712
Query: 619 LDA--EVLRILQVAEA 632
L A E L+ ++ EA
Sbjct: 713 LLAGGETLKAKELFEA 728
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 120/556 (21%), Positives = 227/556 (40%), Gaps = 63/556 (11%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D L ++ S G PNRV Y +IS+ C +G A K++E MR+ FN
Sbjct: 209 DLLDEMRSSGALPNRVAYNTVISS------LCGEGQTVEAEKLVEKMREVGLSPDIVTFN 262
Query: 164 ALIYGHSQANDMASAEGILTMM---SQAGL-EPSAQTYTKLMCGYAKHGDMDSIKTKIPS 219
I ++ + A I M + GL +P+ TY ++ G+ G + + S
Sbjct: 263 CRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDS 322
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG- 278
+K SE S+ + L ++ S + A IL M++ ++P+ +Y L+ G K+G
Sbjct: 323 MK-NSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGM 381
Query: 279 --DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM 336
D S+ L+ +SG + Y ++H G I E + ++
Sbjct: 382 FSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGK---ILEANYVL------------RE 426
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
M Q G P+ T L+ K G + + + +++ + G L N +I+ L +G+
Sbjct: 427 MIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGN 486
Query: 394 GEYIDEIISKI----QPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLP 449
+ EI+S + +G ++ ++ + N G+ + + A I G
Sbjct: 487 LDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGK-----KCLPDSITYATIIGGLCK 541
Query: 450 VGGFLVRHMVKTNQPGVGYSADAA---NHIYHLINKGQIDAAYRIVNTLARSANINGEQL 506
VG G S D+ IY+ +G++ +A+R++ + + + L
Sbjct: 542 VGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKG--CNKSL 599
Query: 507 PVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFN----LAVLIKAHVLKEDYTGAV 562
L++ + NQ I ++ + + + + P + ++ L + LK+
Sbjct: 600 RTYNSLIQGLGSENQ-IFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLD 658
Query: 563 ETFEYCVN----QFRATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEVNSLYDLMLSF 618
E + ++ FR L+ F +A D Q + +++ S+ G SLY M +
Sbjct: 659 EMLQKGISPNIYTFRI------LIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNE 712
Query: 619 LDA--EVLRILQVAEA 632
L A E L+ ++ EA
Sbjct: 713 LLAGGETLKAKELFEA 728
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN V + + LI +C++G ++
Sbjct: 194 DVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXF------TTLIDGHCKNGRVD 247
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLI 307
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+DS + ++ + + AE +L M GL+
Sbjct: 308 DGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLK 367
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P A+TYT ++ + K GD+ +LL +
Sbjct: 368 PDARTYTMIINEFCKKGDVWKGSKLLKE 395
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 130/306 (42%), Gaps = 41/306 (13%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 121 YPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 180
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q ++ +++ + S A + M GL P+ +T L+
Sbjct: 181 RLKSAMLASGVQPDV---YTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLI 237
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G IDE
Sbjct: 238 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE------- 290
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS----IRRLLAQNGSSLVNGD 380
MS GL+P TYT L+ G K GD+DS +R++ +N L
Sbjct: 291 ------------MSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQEN-XRLDEVX 337
Query: 381 YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
Y +I L G ++++ ++ VG DA + I KG + +++ +
Sbjct: 338 YTALISGLCXEGRSVDAEKMLREMLS-VGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 396
Query: 438 ARSANI 443
R ++
Sbjct: 397 QRDGHV 402
>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 584
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 125/277 (45%), Gaps = 43/277 (15%)
Query: 53 WCSEPSLGPGNLPCEDPFSVHTGELDVPL--DISHYNALLRVYLDNEHTFSPTDFLAKLE 110
WC++ L E+ ++V ++ + DI YN L R + N T + + K++
Sbjct: 194 WCTKNEL-------EEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQ 246
Query: 111 --SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ ++PN T +I YC++GN+ A + L M++ + VFN+LI G
Sbjct: 247 QYNNKVKPNERTC------GIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKG 300
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--------IKTKI-PS 219
+ D E LT+M + G++P TY+ +M ++ G MD+ +K +I P
Sbjct: 301 YLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPD 360
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
++ S L + + + AE +L M++ GL+ + +T ++ G+ G
Sbjct: 361 IQAYSILAKGY---------VRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGK 411
Query: 280 MDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGE 313
MD RL + + G+ L Y +I G+GE
Sbjct: 412 MDCALRLYEKMNEMGTPLNLKTYETLIW-----GYGE 443
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 120/292 (41%), Gaps = 31/292 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+NA++ + D+ K++ G +P T+ LI ++ G A K
Sbjct: 116 FNAMINAFSDSGKVHEAMKIFRKMKECGCKPTTSTFNTLIKGFGIV------GRPHEAMK 169
Query: 146 ILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
+LE M +D +E +N LI N++ A ++ M +G++P TY L +
Sbjct: 170 LLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAF 229
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL----VSSDMASAEGILTMMSQAGL 260
A++G+ D+ + I LK Q + T +I+ +M A L M + G+
Sbjct: 230 AQNGETDNAERLI--LKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGV 287
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
P+ + L+ GY D D V L + D Y I++A + SG + +E
Sbjct: 288 HPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEE 347
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ F + M +A +EP Q Y+ L GY + G D LL
Sbjct: 348 I-----FDD----------MVKAEIEPDIQAYSILAKGYVRAGQPDKAEALL 384
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 17/217 (7%)
Query: 53 WCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ 112
+C E GN+ F EL V + +N+L++ YLD T + L +E
Sbjct: 266 YCKE-----GNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEF 320
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
GI+P+ VTY S +++ + G ++ +I + M ++ L G+ +A
Sbjct: 321 GIKPDVVTY------STIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRA 374
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
AE +L M++ GL+ + +T ++ G+ G MD + + +E+ +
Sbjct: 375 GQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDC---ALRLYEKMNEMGTPLNL 431
Query: 233 QLTNLLILVSSDMA---SAEGILTMMSQAGLEPSAQT 266
+ LI + AE +L M ++G+ P T
Sbjct: 432 KTYETLIWGYGEAKQPWKAEELLVTMEESGVAPEMST 468
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 114/292 (39%), Gaps = 55/292 (18%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V ++ YN LL Y+ + + L +E + + + TY S LI Y G
Sbjct: 248 VKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATY------SILIQWYSSSG 301
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+IE A KI E MR+K + V++++I + +M A + MSQ + P+A TY
Sbjct: 302 DIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYG 361
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G K G M+ +AE +L M
Sbjct: 362 ALIGGVCKAGQME-----------------------------------AAEILLLEMQSK 386
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI-IHALAVSGHGEYIDE 317
G++ + + M GY + G MD RL A +N D I A + Y DE
Sbjct: 387 GVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRY-DE 445
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
C +N M + G++P+ T+T + Y K G++ RL
Sbjct: 446 AK---CILN---------SMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLF 485
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 121/297 (40%), Gaps = 26/297 (8%)
Query: 76 ELDVPLDISHYNALL---RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
E ++ +D+ Y++++ R + + F+ D ++ + I PN TY LI
Sbjct: 315 EKNIEMDVYVYSSMISWSRRLGNMKRAFALFD---EMSQRDIVPNAHTYGALIGG----- 366
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
C+ G +E A +L M+ K ++ +FN + G+ + M A + +M + G+
Sbjct: 367 -VCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINA 425
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
TY L G K D K + S+ + +F + + ++A AE +
Sbjct: 426 DVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLF 485
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
M + G P+ TY L+ Y K + ++ S ++N L ++ + HG
Sbjct: 486 RDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKI----KSEMINKGLLPDLYTYSSLIHG 541
Query: 313 EYI-DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
E I V + N M G+ + TYT ++ G +K G D +L
Sbjct: 542 ECIVGRVDEALKLFN---------EMRLKGITRNVATYTSMISGLSKEGRADEAFKL 589
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 104/265 (39%), Gaps = 27/265 (10%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L +++S+G++ N V + + YC+ G ++ A ++ M K +N
Sbjct: 379 LLLEMQSKGVDLNLVIFNTTMDG------YCRRGKMDEALRLQAIMEKKGINADVFTYNI 432
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
L G + + A+ IL M + G++P+ T+T + Y K G++ + ++ +
Sbjct: 433 LANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKG 492
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
E+ ++ + A I + M GL P TY+ L+ G G +D
Sbjct: 493 EVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEAL 552
Query: 285 RLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
+L + G + Y +I L+ G DE + M + G
Sbjct: 553 KLFNEMRLKGITRNVATYTSMISGLSKEGRA---DEAFKLY------------DEMMKIG 597
Query: 342 LEPSAQTYTKLMCGYAK---HGDMD 363
L P + +T L+ + K H +D
Sbjct: 598 LIPDDRVFTSLVGSFHKPLTHAGLD 622
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 121/313 (38%), Gaps = 59/313 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNAL+ Y + L +ES PN TY +LI C+ + A
Sbjct: 372 YNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICG------LCKKRKVHKAMA 425
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY-------- 197
+L M ++ S +N+LI+G + ND+ SA +L++M++ GL P TY
Sbjct: 426 LLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLC 485
Query: 198 ---------------------------TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
T L+ GY K G +D + + + + L +
Sbjct: 486 KEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY 545
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
++ + + M A ++ M G++P+ TYT L+ K G D ++
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605
Query: 291 GSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S D Y +HA G E +D+V A M++ G+ P
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIA---------------KMNEEGILPDLV 650
Query: 348 TYTKLMCGYAKHG 360
TYT L+ GYA+ G
Sbjct: 651 TYTVLIDGYARLG 663
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 130/306 (42%), Gaps = 27/306 (8%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L+++ +G+ P+ VTY LI YC++G I+ A +IL+ M + + +N
Sbjct: 356 MLSEMSEKGLIPSVVTYNALIDG------YCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
LI G + + A +L M + L PS TY L+ G K D++S + +
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ +++ + + + A + + G++ + YT L+ GY K G +D
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529
Query: 285 RLLAQ--SGSSLVNG-DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
LL + + + L N Y +I L + + E S++V M G
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLC---KEKKMKEASSLV------------AKMLTMG 574
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYID 398
++P+ TYT L+ K G D ++ S D Y +HA G E +D
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634
Query: 399 EIISKI 404
++I+K+
Sbjct: 635 DVIAKM 640
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 136/369 (36%), Gaps = 66/369 (17%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y +L+ + N+ + + + +G + N V+Y + LI C+ G I
Sbjct: 228 DTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSY------TNLIHGLCEAGRIN 281
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ M + + + LIY S + A + M + G EP+ TYT L+
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLI 341
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K MD A +L+ MS+ GL
Sbjct: 342 DGLCKENKMD-----------------------------------EARKMLSEMSEKGLI 366
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRL--LAQSGSSLVNG-DYLDIIHALAVSGHGEYIDEV 318
PS TY L+ GY K G +D + L +S S N Y ++I L +V
Sbjct: 367 PSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKK------RKV 420
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSS 375
+ +N M + L PS TY L+ G K D++S RLL+ +NG
Sbjct: 421 HKAMALLN---------KMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYR 432
Y I L G E + ++ G A+ + I G+ID AY
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK-GVKANEVIYTALIDGYCKVGKIDVAYS 530
Query: 433 IVNTLARSA 441
++ + A
Sbjct: 531 LLERMLNDA 539
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 54/234 (23%)
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E T LE + ++ P + FNA++ G+ + ++ AE + + QAGL P TYT L
Sbjct: 177 EMKTVYLELLNNQISP-NIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSL 235
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ G+ ++ +D+ E+FL +M Q G
Sbjct: 236 ILGHCRNKGVDN----------AYEVFL-------------------------IMPQKGC 260
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
+ + +YT L+ G + G ++ +L A + Y +I+AL+ SG +
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGR-----K 315
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
V A+ F M + G EP+ TYT L+ G K MD R++L++
Sbjct: 316 VEALNLFNE----------MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 43/85 (50%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI+ +CQ +E A ++ M+++ SE ++N+L+ + A A ++ M + G
Sbjct: 754 LIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENG 813
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIK 214
L P ++Y L+CG G + K
Sbjct: 814 LLPLLESYKLLVCGLYIEGSNEKAK 838
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 129/305 (42%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 119 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGF 178
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 179 XLKSXMLASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLVKGLVPNGVTFTTLI 235
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G IDE
Sbjct: 236 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE------- 288
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+DS R+ + Q L Y
Sbjct: 289 ------------MSVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAY 336
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I G ++++ ++ VG DA + I G + +++ +
Sbjct: 337 TALISGXCQEGRSVDAEKMLREMLS-VGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQ 395
Query: 439 RSANI 443
R ++
Sbjct: 396 RDGHV 400
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 192 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF------TTLIDGHCKNGRVD 245
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 305
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+DS + ++ ++ AE +L M GL+
Sbjct: 306 NGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLK 365
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P A+TYT ++ + K GD+ +LL +
Sbjct: 366 PDARTYTMIINEFCKXGDVWXGSKLLKE 393
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 134/305 (43%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PSA +Y LM GY + G +D
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A+ + M GL P+ T+T L+
Sbjct: 198 RLKSAMLASGVQPDVY-TYSVLINGL--SKESKMDDADELFDEMLVKGLVPNGVTFTTLI 254
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I+ L G + ID+
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDD------- 307
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS+ GL+P TYT L+ G K GD+DS R+ + Q L + Y
Sbjct: 308 ------------MSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVY 355
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG + D + I KG + +++ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLS-VGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 439 RSANI 443
R ++
Sbjct: 415 RDGHV 419
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+ PN VT+ + LI +C++G ++ A +I + M ++ +N LIYG +
Sbjct: 241 KGLVPNGVTF------TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK 294
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF--LC 229
D+ A ++ MS+ GL+P TYT L+ G K GD+DS + ++ +
Sbjct: 295 KGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVV 354
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
++ ++ L S AE +L M GL P TYT ++ + K GD+ +LL +
Sbjct: 355 YTALISGLCQEGRS--VDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKE 412
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 112/280 (40%), Gaps = 53/280 (18%)
Query: 130 LISKYCQDGNIEGATKIL-----------------------------EFMRDKTFPISEG 160
L+ ++C+DG+I A + E R K+ ++ G
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASG 207
Query: 161 V------FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
V ++ LI G S+ + M A+ + M GL P+ T+T L+ G+ K+G +D
Sbjct: 208 VQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 267
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+ QS L ++ + D+ A ++ MS+ GL+P TYT L+ G
Sbjct: 268 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGC 327
Query: 275 AKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
K GD+DS R+ + Q L + Y +I L G +D +
Sbjct: 328 CKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRS--VDAEKML---------- 375
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M GL P TYT ++ + K GD+ +LL +
Sbjct: 376 ---REMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKE 412
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/362 (22%), Positives = 141/362 (38%), Gaps = 64/362 (17%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ L+R Y T + L ++ G PN+V Y LIS+ +C++G + A K
Sbjct: 94 FGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISS------FCKEGKTDDAEK 147
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM---SQAGL-EPSAQTYTKLM 201
+++ MR FNA I + + A I M GL +P+ TY ++
Sbjct: 148 LVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLML 207
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K G ++ + +K L S+ + L ++ + A+ +L M G+E
Sbjct: 208 GGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGME 267
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P+ +Y +M G K+G + R L+ SS
Sbjct: 268 PNVYSYNIVMDGLCKNGVLFDARMLMRLMTSS---------------------------- 299
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSSLVN 378
G+ P TYT L+ GY G + +++ R + ++G S N
Sbjct: 300 -------------------GVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNN 340
Query: 379 GDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVN 435
++++L G +E++ K+ GY D I L N G++D A IVN
Sbjct: 341 YTCNILLYSLWKEGRISEAEELLQKMNEK-GYVIDTVTCNIVIDGLCNNGKLDKAIEIVN 399
Query: 436 TL 437
+
Sbjct: 400 GM 401
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 168/435 (38%), Gaps = 56/435 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN ++ N F + + S G+ P+ VTY + L+ YC G +
Sbjct: 269 NVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTY------TTLLHGYCHTGKVS 322
Query: 142 GATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A +L E MRD P + N L+Y + ++ AE +L M++ G T +
Sbjct: 323 EANNVLREMMRDGCSP-NNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIV 381
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ G +G +D + + L L N I + D S + +
Sbjct: 382 IDGLCNNGKLDKAIEIVNGMWTHGSAAL---GNLGNSYIGLVDDSDSRKKCM-------- 430
Query: 261 EPSAQTYTKLMCGYAKHGDM-DSVRRLLAQSGSSLV--NGDYLDIIHALAVSGHGEYIDE 317
P +Y+ ++ G K G + ++ ++ + G +L + Y IH+ G
Sbjct: 431 -PDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGK------ 483
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
++ F L+ M + G + QTY L+ G + I L+ + V
Sbjct: 484 -------ISSAFRVLKD--MEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGV 534
Query: 378 NGD---YLDIIHALAVSGHGE----YIDEIISK-IQPGVGYSADAANHIYHLINKGQIDA 429
+ D Y +++ +L G + +DE++ K I P + + + +D
Sbjct: 535 SPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDE 594
Query: 430 AYRI-VNTLARSA---NINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIY-----HLI 480
+ I +N ++ +L VGG +V+ + + + S D N +Y HL
Sbjct: 595 IFEIALNVCGHKEALYSLTFNELLVGGEVVKAK-ELFETALDRSFDVGNFLYKDLIDHLC 653
Query: 481 NKGQIDAAYRIVNTL 495
++D A I++ L
Sbjct: 654 KDEKLDDASGILHKL 668
>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
Length = 410
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 127/312 (40%), Gaps = 44/312 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY------------------------ 121
Y AL+ Y + ++ G+EPN TY
Sbjct: 76 YTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMP 135
Query: 122 -----QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
+ ++S + LI+ C+ G ++ A ++ E MR + S FN LI G+ +A M+
Sbjct: 136 LKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMS 195
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236
+A M AGL+PS TY +L+ G+ + D+ +K + ++ +
Sbjct: 196 NALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILI 255
Query: 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN 296
++M A +L+ M +AGLE Q+Y L+ G M R+L S V
Sbjct: 256 GAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVK 315
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYT---KLM 353
+ ++++ + + G+G A+ + M ++GL P+ +Y +L+
Sbjct: 316 PN--NVLYDMMIYGYGREGSSYKALRLIME----------MRKSGLIPNVASYCLTIRLL 363
Query: 354 CGYAKHGDMDSI 365
C K + +++
Sbjct: 364 CNEGKCQEAEAL 375
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 111/268 (41%), Gaps = 15/268 (5%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+ L+ CQ G++ A ++ + M +E + ALI+G+ ++ M +
Sbjct: 42 TALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEMRR 101
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
G+EP+ TY L+ + + G+ S + + + + S+ + + +
Sbjct: 102 GGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKD 161
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
A + M + G+ PS T+ L+ GY K G M + Q ++ + + +
Sbjct: 162 AAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSV--VTYNEL 219
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
+ G D AI F + M + L P+ TYT L+ +AK +MD
Sbjct: 220 IGGFCRARDIAHAIRAFSD----------MKERRLAPTKVTYTILIGAFAKENEMDRAFE 269
Query: 368 LLAQNGSSLVNGD---YLDIIHALAVSG 392
+L++ + + D Y ++HAL + G
Sbjct: 270 MLSEMEKAGLEVDVQSYGVLLHALCMEG 297
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 131/306 (42%), Gaps = 41/306 (13%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A + +++ GL PS +Y LM GY + GD+D
Sbjct: 127 YPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 186
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 187 RLKSAMRASGVQPDVYT-YSVLINGL--CKESXMDDANELFDEMLVKGLVPNXVTFTTLI 243
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSG-----HGEYIDEVSAIVC 323
G+ K+G +D + Q S + D Y +++ L G HG IDE
Sbjct: 244 DGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHG-LIDE------ 296
Query: 324 FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGD 380
M GL+P TYT L+ G K GD+D+ R+ + Q L +
Sbjct: 297 -------------MXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVA 343
Query: 381 YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
Y +I L G ++++ ++ VG D + I KG + +++ +
Sbjct: 344 YTALISGLCQEGRSXDAEKMLREMLS-VGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEM 402
Query: 438 ARSANI 443
R+ ++
Sbjct: 403 QRNGHV 408
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 124/300 (41%), Gaps = 26/300 (8%)
Query: 76 ELDVPLDISHYNALL-RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
E P + +N L+ R D + +P F A + G+ P+ V+Y L++ Y
Sbjct: 124 ECGYPASLYFFNILMHRFCKDGDIRVAPLVFDA-ITKWGLRPSVVSYNTLMNG------Y 176
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G+++ ++ MR ++ LI G + + M A + M GL P+
Sbjct: 177 IRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNX 236
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
T+T L+ G+ K+G +D + Q L ++ + D+ A G++
Sbjct: 237 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDE 296
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGH 311
M GL+P TYT L+ G K GD+D+ R+ + Q L + Y +I L G
Sbjct: 297 MXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGR 356
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+++ M GL+P TYT ++ + K GD+ +LL +
Sbjct: 357 SXDAEKMLR---------------EMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 401
>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
Length = 1031
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 118/278 (42%), Gaps = 39/278 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN +L Y+ S L +E GIE + TY + +I K C+ A
Sbjct: 267 YNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTY------NIMIDKLCKLKRSARAYL 320
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ MR+ E +N LI+G + A I M + L+PS TYT L+ GY
Sbjct: 321 LLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYC 380
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
++G D + + + Q+T + +++ A+ IL M G++P
Sbjct: 381 RNGRTDEARRVL------------YEMQITGVR---PREVSKAKQILKCMLADGIDPDVI 425
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLV---NGDYLDIIHALAVSGHGEYIDEVSAIV 322
TY+ L+ G K G + + +L++ S V N Y ++ +GH + A+
Sbjct: 426 TYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAK-----EALK 480
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
FV+I ++GL ++ + L+C + + G
Sbjct: 481 YFVDI----------YRSGLVANSVIHNALLCSFYREG 508
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/332 (19%), Positives = 124/332 (37%), Gaps = 52/332 (15%)
Query: 68 DPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
+ F + + + D++ +N ++ Y + + G P+ TY L+
Sbjct: 514 EQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRG 573
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
CQ G++ A + + ++ +K I E N L+ G + + A + M
Sbjct: 574 ------LCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT 627
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS-----------LKPQSELFLCFSFQLTN 236
+ P TYT L+ G+ K G + +P+ L P + + C L N
Sbjct: 628 RNILPDTYTYTILLDGFCKRGKI------VPALILLQMMLEKGLVPDTIAYTC----LLN 677
Query: 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV- 295
L+ A++ ++ + GL Y +M GY K G ++ + RL+ + V
Sbjct: 678 GLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVY 737
Query: 296 --NGDYLDIIHALAVSGH--------------GEYIDEVSAIVCFVNIC--------FHW 331
+ Y ++H G G D V+ + +C +
Sbjct: 738 PSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKF 797
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
LE ++ ++GL+P Y L+ + GD+D
Sbjct: 798 LEKMVLEESGLQPKHTHYIALINAKCRVGDID 829
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 131/350 (37%), Gaps = 76/350 (21%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
G+L F V+ E +D N LL + D K+ ++ I P+ TY
Sbjct: 578 GHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTY 637
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFP-------------ISEG-------- 160
+ L+ +C+ G I A +L+ M +K ++EG
Sbjct: 638 ------TILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYM 691
Query: 161 ---------------VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+N+++ G+ + + E ++ M + + PS+ +Y LM GY
Sbjct: 692 FQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYI 751
Query: 206 KHGDM--------DSIKTKIPSLKPQSELFLCFSFQLTNL-LILVSSDMASAEGILTMMS 256
K G + D +K I KP + + F L LI ++ ++
Sbjct: 752 KKGQLSRTLYLYRDMVKEGI---KPDNVTYRLLIFGLCEYGLIEIAVKFLEK----MVLE 804
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS-SLVNGDYLD--IIHALAVSGHGE 313
++GL+P Y L+ + GD+D L + +V + + I+ L G E
Sbjct: 805 ESGLQPKHTHYIALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVE 864
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
AI+ F +I +AG+ P+ T+T LM G K +D
Sbjct: 865 -----EAIIVFSSI----------MRAGMVPTIATFTTLMHGLCKEFKID 899
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 14/188 (7%)
Query: 105 FLAK--LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
FL K LE G++P Y LI N+K C+ G+I+GA ++ E M+ SE
Sbjct: 797 FLEKMVLEESGLQPKHTHYIALI-NAK-----CRVGDIDGAFELKEDMKALGVVPSEVAE 850
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPS 219
++++ G + + A + + + +AG+ P+ T+T LM G K +D +K + S
Sbjct: 851 SSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMES 910
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
+ ++ + ++ +T L + A + M GL P+ TY L G
Sbjct: 911 CGLKVDV-VTYNVLITGL--CNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGT 967
Query: 280 MDSVRRLL 287
M +LL
Sbjct: 968 MQDGEKLL 975
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 121/293 (41%), Gaps = 19/293 (6%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ VY + ++ G+ PN VTY LI C+ G ++ A +
Sbjct: 436 YTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY------GALIDGLCKHGELDTANE 489
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ MR K ++ ++N+++ G +A ++ A ++ M AG++P A TYT ++ Y
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ GD+D + + + +F + + + + +L M + G+ P A
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
TY LM + M++ ++ + + V D + + + GH + + A
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPD--SNTYNILIKGHCKARNLKEA----- 662
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ-NGSSLV 377
W M + G P+ +Y L+ + K R L + G LV
Sbjct: 663 -----WFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLV 710
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 59/289 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+++ + +F L ++ SQ I P+ V Y + LI + + G++ A K
Sbjct: 331 YNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVY------TTLIHGFFKLGHVRTANK 384
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M K + LI G Q + + + M GL+P TYT L+ Y
Sbjct: 385 WFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G+M + +F L N M Q G+ P+
Sbjct: 445 KAGEMVN------------------AFSLHN-----------------EMVQMGMTPNIV 469
Query: 266 TYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TY L+ G KHG++D+ LL + G L Y +++ + +G+ I++ ++
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN---IEQAIKLM 526
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M AG++P A TYT ++ Y + GD+D +LL +
Sbjct: 527 ------------KEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQE 563
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 123/315 (39%), Gaps = 50/315 (15%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD-------MDSIK 214
+N +IY + + A +L M P +Y+ ++ GY G+ MD ++
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQ 320
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
K LKP +++ LL+ AE +L M + P YT L+ G+
Sbjct: 321 IK--GLKPNR-----YTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI-----------------DE 317
K G + + + + S ++ DY+ + G G + DE
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433
Query: 318 VSAIVCFVNICFHWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
V+ C G M M Q G+ P+ TY L+ G KHG++D+ L
Sbjct: 434 VTYTTLIDVYC---KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL 490
Query: 369 L---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLI 422
L + G L Y +++ + +G+ E +++ +++ G DA + I
Sbjct: 491 LDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVA-GIDPDAITYTTVIDAYC 549
Query: 423 NKGQIDAAYRIVNTL 437
G ID A++++ +
Sbjct: 550 RLGDIDKAHKLLQEM 564
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 39/293 (13%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS--AEGILTMMSQ 187
++ Y + G + A ++L+ MRD+ FN LI +++ +A+ A +L + Q
Sbjct: 67 MMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQ 126
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILV--- 241
AGL P A TY L+ ++ ++D ++ ++ + + + +L+ N ++ V
Sbjct: 127 AGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWT------YNAMVSVHGR 180
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGD 298
AE + + + G +P A TY L+ +AK GD++ V R+ L ++G
Sbjct: 181 CGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGIT 240
Query: 299 YLDIIHALAVSGH-----GEYIDEVSAIVCFVNICFHWLE----GPM------------M 337
Y +IH G G Y DE+ AI C + + + G M M
Sbjct: 241 YNTMIHMYGKMGRLDLALGLY-DEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEM 299
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAV 390
+ AGL+P+ T++ L+C YAK G D R + S V D L + L V
Sbjct: 300 ADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDV 352
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 109/297 (36%), Gaps = 53/297 (17%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L ++ G+ P+ +TY LIS Q N++ A + E M +N
Sbjct: 119 ELLHEVRQAGLRPDAITYNTLISACS------QGSNLDDAVAVFEEMIASECRPDLWTYN 172
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK--------- 214
A++ H + AE + + + G +P A TY L+ +AK GD++ ++
Sbjct: 173 AMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKA 232
Query: 215 ----------TKIPSLKPQSELFLCFSF-----------QLTNLLILVSS-----DMASA 248
T I L L +LV S ++ A
Sbjct: 233 GFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEA 292
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
+L M+ AGL+P+ T++ L+C YAK G D R + S V D L + L V
Sbjct: 293 GKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDV 352
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
DE ++ M + G +P Y L+ AK + D I
Sbjct: 353 FARS---DETRKLMVLYRA---------MIKDGYKPDDGLYQVLLAALAKGNEHDEI 397
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 25/214 (11%)
Query: 74 TGELDVPLDISH-------------YNALLRVYLDNEHTFSPTD---FLAKLESQGIEPN 117
TG D +++ H YN L+ +Y N F P + L ++ +G+ P
Sbjct: 775 TGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRN---FRPEEGFTLLYEMGKRGLTPK 831
Query: 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS 177
+Y+ L++ S + E A + E MR K + ++ +++ ++ + A + +
Sbjct: 832 LESYKILLAASGKAKLW------EQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSK 885
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
AE +L+ M + G+EP+ T LM Y G D + + SLK + +
Sbjct: 886 AEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLD 945
Query: 238 LILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
L + D + L M + G+EP Q +T +
Sbjct: 946 AYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFI 979
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 167/419 (39%), Gaps = 45/419 (10%)
Query: 33 GALGAFLVLLVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGEL--DVPLDISHYNALL 90
GA+ V+ F L + +C + +D V + + + LD+ Y L+
Sbjct: 378 GAIARGFTPTVITFTNLINGYCKAERI-------DDALRVKSNMISSNCKLDLQAYGVLI 430
Query: 91 RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFM 150
V + + L ++ + G+ PN V Y + +I YC+ G + A ++ + M
Sbjct: 431 NVLIKKCRLKEAKETLNEMFANGLAPNVVIY------TSIIDGYCKVGMVGAALEVFKLM 484
Query: 151 RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210
+ + + +LIYG Q + A ++T M + G+ P YT L+ G K +
Sbjct: 485 EHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEF 544
Query: 211 DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKL 270
D+ ++ L Q N+L AE + + + G+ + TYT L
Sbjct: 545 DNAFRLFEMMEKNG---LTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSL 601
Query: 271 MCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALA----VSGHGEYIDE--VSAI 321
+ G++K G+ D L+ + + D Y ++ AL ++ +D+ VS +
Sbjct: 602 VDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGV 661
Query: 322 VCFVNICFHWL-------EGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
C NI + + EG M +G +PSA TYT + Y K G ++
Sbjct: 662 KC--NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEA 719
Query: 366 RRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINK 424
L+ + V D + + GH Y+D S ++ V S + Y L+ K
Sbjct: 720 EHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLK 778
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 130/301 (43%), Gaps = 41/301 (13%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLES----QGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
YN LR L F T+++ KL S +G+ P+ VTY + +I YC+ G++
Sbjct: 147 YNLALRSLL----RFDMTEYMGKLYSHLVQEGLLPDTVTY------NTMIMAYCKKGSLA 196
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + +R+ + NAL+ G+ + +D+ A +L MM G + +YT L+
Sbjct: 197 IAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILI 256
Query: 202 CG-YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQ 257
G Y +++ ++ L + + LLI + A G+L M
Sbjct: 257 QGLYEARCVREALVLVFMMVQDGCSL----NLHMYTLLIKGLCKEGRIHDARGLLDEMPL 312
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
G+ PS TY ++ GY K G M ++ L+ Q+G + + Y +I+ L G
Sbjct: 313 RGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC----GGK 368
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGS 374
+DE + L G + G P+ T+T L+ GY K +D R+ + S
Sbjct: 369 LDEAEEL----------LNGAIAR--GFTPTVITFTNLINGYCKAERIDDALRVKSNMIS 416
Query: 375 S 375
S
Sbjct: 417 S 417
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 117/287 (40%), Gaps = 25/287 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L + FL + +G+ +VTY + L+ + + GN +
Sbjct: 562 DEQAYNVLTDALCKSGRAEEAYSFLVR---KGVVLTKVTY------TSLVDGFSKAGNTD 612
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++E M ++ ++ L+ + + A IL M+ +G++ + YT ++
Sbjct: 613 FAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIII 672
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
K G D K+ + KP + + F + + AE ++ M
Sbjct: 673 SEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKI-----GQIEEAEHLIGEME 727
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMD----SVRRLLAQSGSSLVNGDYLDIIHALAVSG-H 311
+ G+ P TY + G G MD +++R++ S +L + H L +S +
Sbjct: 728 RDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLIN 787
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
YID S + ++ + W M + GL P+ TY+ ++ G+ K
Sbjct: 788 AHYID-TSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCK 833
>gi|218194640|gb|EEC77067.1| hypothetical protein OsI_15461 [Oryza sativa Indica Group]
Length = 548
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 151/362 (41%), Gaps = 35/362 (9%)
Query: 56 EPSLGPGNLPCED----PFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLES 111
+P++G G L D F H ++ VPLD + Y L++ + + ++ + S
Sbjct: 162 KPTVGTGRLDRLDDAMEKFK-HMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLS 220
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+GI P + + + +I+ C++G + I++ + + FN+L+ G+
Sbjct: 221 KGIPPPCIKF-----FTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCL 275
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
+M A G+L M G+EP TY L+ GY KHG +D T + + S
Sbjct: 276 VGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVS 335
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
+ + + + A+ + M ++G+ S TY ++ G ++ D LL +
Sbjct: 336 YNIILHGLFQARRTVVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLF 395
Query: 292 SSLVNGDYLD---IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
S V D L +I A+ G + E+ A + S GL P+ T
Sbjct: 396 SMNVKFDILTFNIVIRAMFKVGRMQEAKELFAAI---------------STYGLVPTILT 440
Query: 349 YTKLMCGYAKH---GDMDSIRRLLAQNG----SSLVNGDYLDIIHALAVSGHGEYIDEII 401
Y ++ K D D++ + ++G S ++N +++ ++ G Y+ +I
Sbjct: 441 YRVMITNLIKEESFEDADNLFSSMEKSGCTPDSCILNEIIRMLLNKGEIAKAGHYLSKID 500
Query: 402 SK 403
K
Sbjct: 501 KK 502
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 39/289 (13%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 120 YPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 179
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 180 RLKSAMHASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLVKGLVPNGVTFTTLI 236
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I+ L G + IDE
Sbjct: 237 DGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE------- 289
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+D+ R+ + Q L + Y
Sbjct: 290 ------------MSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 337
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQI 427
+I L G ++++ ++ VG DA + I KG +
Sbjct: 338 TALISGLCQEGRSVDAEKMLREMLS-VGLKPDARTYTMIINEFCKKGDV 385
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ LI +C++G ++
Sbjct: 193 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDG------HCKNGRVD 246
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 247 LALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALI 306
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE +L M GL+
Sbjct: 307 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 366
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P A+TYT ++ + K GD+ +LL +
Sbjct: 367 PDARTYTMIINEFCKKGDVWKGSKLLKE 394
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 119/295 (40%), Gaps = 24/295 (8%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P + +N L+ + + G+ P+ V+Y L++ Y + G+
Sbjct: 121 PASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNG------YIRLGD 174
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
++ ++ M ++ LI G + + M A + M GL P+ T+T
Sbjct: 175 LDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTT 234
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L+ G+ K+G +D + QS L ++ + D+ A ++ MS G
Sbjct: 235 LIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKG 294
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
L+P TYT L+ G K GD+D+ R+ + Q L + Y +I L G +D
Sbjct: 295 LKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS--VD 352
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ M GL+P A+TYT ++ + K GD+ +LL +
Sbjct: 353 AEKML-------------REMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 130/305 (42%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 119 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 178
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 179 RLKSAMLASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLVKGLVPNGVTFTTLI 235
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G IDE
Sbjct: 236 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE------- 288
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS L+P TYT L+ G K GD+DS R+ + Q L Y
Sbjct: 289 ------------MSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAY 336
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG D+ + I KG + +++ +
Sbjct: 337 TALISGLCQEGRSVDAEKMLREM-LNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQ 395
Query: 439 RSANI 443
R ++
Sbjct: 396 RDGHV 400
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 192 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF------TTLIDGHCKNGRVD 245
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS L+P TYT L+
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLI 305
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+DS + ++ ++ + AE +L M GL+
Sbjct: 306 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLK 365
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P ++TYT ++ + K GD+ +LL +
Sbjct: 366 PDSRTYTMIINEFCKKGDVWKGSKLLKE 393
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 134/332 (40%), Gaps = 66/332 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN LL + L +++ +G+ P+ T+ + LI YC+DGNIE
Sbjct: 368 DVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTF------TTLIHGYCRDGNIE 421
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + + D+ +N LI G + D+ A + M + P+ TY+ L+
Sbjct: 422 KALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILI 481
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+ + G +D+ F+F L M G+
Sbjct: 482 DSHCEKGQVDN----------------AFAF-------------------LDEMVNKGIV 506
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
P+ TY ++ GY + G++ ++ L + V D Y +IH G
Sbjct: 507 PNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGK------- 559
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
++ F+ L+ +M ++P A TY ++ G++ HG+M + + G+ +
Sbjct: 560 ------MHEAFNLLK--IMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIE 611
Query: 379 GD---YLDIIHALAVSGHG----EYIDEIISK 403
D Y+ +I+ V+G+ + DE++ K
Sbjct: 612 PDRYTYMSMINGHVVAGNSKKSFQLHDEMLQK 643
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/377 (22%), Positives = 152/377 (40%), Gaps = 33/377 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQG--IEPNRVTYQQLISNSKLISK 133
EL D+ Y+ LL+ + + + + G P+ V+Y S +I
Sbjct: 77 ELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSY------STVIHG 130
Query: 134 YCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPS 193
+ ++G++ A + M D P + N++I G + M AE +L M + P+
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190
Query: 194 AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
TY L+ GY G + + + ++ + + S A A I
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
M Q+G +P A TY L+ GYA G +M++V+ L+ Q+G + + I+A G
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCG 310
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+DE S + F+ M Q G P TYT ++ G K G +D
Sbjct: 311 R---LDEAS--LTFIK----------MQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFC 355
Query: 371 Q---NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADA---ANHIYHLINK 424
Q +G S + +IH ++ G E +E+ ++ G D I L +
Sbjct: 356 QMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDR-GIPPDVTIFTAMIDRLFKE 414
Query: 425 GQIDAAYRIVNTLARSA 441
G++ A ++ + + R+
Sbjct: 415 GKVTEAQKLFDLMPRAG 431
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 118/293 (40%), Gaps = 41/293 (13%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL-EFMRDKTFPISEGVFNA 164
L ++ + I PN TY LI Y G A +IL E RD P + +N
Sbjct: 179 LQQMIDEHIMPNCTTYNSLIHG------YLSSGQWTEAVRILKEMSRDGQRP-NVVTYNM 231
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSIKTKIPSLK 221
LI ++ A A I M Q+G +P A TY L+ GYA G +M+++K +
Sbjct: 232 LIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNG 291
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
+S FS ++ D AS I M Q G P TYT ++ G K G +D
Sbjct: 292 MRSNHHT-FSIEIYAYCKCGRLDEASLTFI--KMQQLGFMPDIVTYTTVIDGLCKIGRLD 348
Query: 282 SVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDE-------------VSAIVCFV 325
Q G S + +IH ++ G E +E V+ +
Sbjct: 349 DAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMI 408
Query: 326 NICFHWLEGP---------MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ F EG +M +AG +P+ +Y ++ GY G++ + +LL
Sbjct: 409 DRLFK--EGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLL 459
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 74/184 (40%), Gaps = 22/184 (11%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
++ G+ PN +T+ LI + K+ E A ++ M D+ P +F A+
Sbjct: 354 FCQMIDDGLSPNIITFTTLIHGFSMYGKW------EKAEELFYEMMDRGIPPDVTIFTAM 407
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I + + A+ + +M +AG +P+ +Y ++ GY G++ + + +
Sbjct: 408 IDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM----- 462
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
LLI + + +L M GL+P T L+ + G ++ +
Sbjct: 463 -----------LLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILT 511
Query: 286 LLAQ 289
L +
Sbjct: 512 LFRE 515
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 6/178 (3%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+ PN VT+ + LI +C+ G ++ A +I + M + + +N LIYG +
Sbjct: 235 KGLVPNGVTF------TTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCR 288
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
D+ A ++ MS GL+P TYT L+ G K GD+++ + +S +
Sbjct: 289 KGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVA 348
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ + AE +L M GL+P TYT ++ G+ K GD+ + +LL +
Sbjct: 349 YTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKE 406
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 105/266 (39%), Gaps = 59/266 (22%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ + G+ P+ + +N+ LI+ C++ ++ A ++ M DK + F LI G
Sbjct: 197 MHASGVHPD------VYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDG 250
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
H ++ + A I M + G P TY L+ G + G
Sbjct: 251 HCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKG-------------------- 290
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRR 285
D+ A ++ MS GL+P TYT L+ G K GD+++ +R+
Sbjct: 291 ---------------DLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRK 335
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ + L + Y +I L G +D + M GL+P
Sbjct: 336 RMIEESIRLDDVAYTALISGLCQEGRA--VDAEKML-------------REMLSVGLKPE 380
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT ++ G+ K GD+ + +LL +
Sbjct: 381 NGTYTMIINGFCKQGDVKTASKLLKE 406
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 132/305 (43%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS ++ L+ GY + GD+D
Sbjct: 132 YPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLIL----VSSDMASAEGILTMMSQAGLEPSAQTY 267
+KT + + +++ TN +++ S M A + M GL P+ T+
Sbjct: 192 RLKTAMHASGVHPDVY-------TNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTF 244
Query: 268 TKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF 324
T L+ G+ K G +D + + + + G S Y +I+ L G D A
Sbjct: 245 TTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKG-----DLKQARDLI 299
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
V MS GL+P TYT L+ G K GD+++ +R+ + + L + Y
Sbjct: 300 VE----------MSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAY 349
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG + + I +G + A +++ +
Sbjct: 350 TALISGLCQEGRAVDAEKMLREMLS-VGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQ 408
Query: 439 RSANI 443
R ++
Sbjct: 409 RDGHV 413
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ D + ++ +G++P+++TY LI S C++G++E
Sbjct: 275 DLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGS------CKEGDLE 328
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + M +++ + + + ALI G Q AE +L M GL+P TYT ++
Sbjct: 329 TAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMII 388
Query: 202 CGYAKHGDMDS 212
G+ K GD+ +
Sbjct: 389 NGFCKQGDVKT 399
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 131/320 (40%), Gaps = 46/320 (14%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTF-SPTDFLAKLESQGIEPNRVTYQQLISNS 128
F EL +P + N L++ N+ T S ++ ++G +P+ TY
Sbjct: 142 FYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTY------G 195
Query: 129 KLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
LI+ C+ GNI A ++ + M K F S + +LI+G Q+N++ A G+L M +
Sbjct: 196 TLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRN 255
Query: 189 GLEPSAQTYTKLMCGYAKHGD----------MDSIKTKIPSLKPQSELF--LCFSFQLTN 236
+EP+ TY+ LM G K G MD K +P++ S L LC +L
Sbjct: 256 DIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDK-KHHLPNMVTYSTLINGLCKERKLR- 313
Query: 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSS 293
A IL M GL+P+A Y K++ G G + + G S
Sbjct: 314 ----------EAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGIS 363
Query: 294 LVNGDY-LDI-IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
+ L + +H + V G +D A +++ M + T+
Sbjct: 364 PNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLS----------MRTRCISVEIDTFDC 413
Query: 352 LMCGYAKHGDMDSIRRLLAQ 371
L+ + K GD+ R+L +
Sbjct: 414 LVKCFCKRGDLHKAARILEE 433
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 131/331 (39%), Gaps = 57/331 (17%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS--------- 126
E+ P D+ Y ++ Y + L+++ ++G+E N V Y +I+
Sbjct: 278 EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVS 337
Query: 127 --------------------NSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
+ ++S +C+ G++ A + M+ + + ALI
Sbjct: 338 DAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALI 397
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLK 221
G +A ++ AE +L M GL+ A TYT L+ GY K G M K +
Sbjct: 398 NGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT 457
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
P + S L D+ +A +L M GLE + TY L+ G K G+++
Sbjct: 458 PNVVTYTALSDGLCK-----QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512
Query: 282 SVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
R + + + D Y II AL S +D H L M+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE---LDRA-----------HSLLQEMLD 558
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ G++P+ TY LM G+ G ++ +RLL
Sbjct: 559 K-GIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 146/362 (40%), Gaps = 42/362 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V LD + + ++ + + ++ +++ +G+ + VTY + LI+ C+ G
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTY------TALINGLCRAG 404
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A ++L+ M DK + + LI G+ + M A + M Q + P+ TYT
Sbjct: 405 ELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYT 464
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L G K GD+ + + + + F++ + + ++ A + M +A
Sbjct: 465 ALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYI 315
GL+P TYT ++ + ++D LL + G Y +++ +SG E
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
+ W M + + P+ TY LM Y +M S + S
Sbjct: 585 KRL----------LEW-----MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQ 629
Query: 376 LV--NGDYLDIIHALAVSGHGE---------YIDEIISKIQPGVGYSADAANHIYHLINK 424
V N + +I+ + GH + + E+I K G +A + N + L+NK
Sbjct: 630 EVVPNENTYNIL----IKGHCKARNMKEALYFHSEMIEK---GFRLTASSYNALIRLLNK 682
Query: 425 GQ 426
+
Sbjct: 683 KK 684
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 131/331 (39%), Gaps = 57/331 (17%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS--------- 126
E+ P D+ Y ++ Y + L+++ ++G+E N V Y +I+
Sbjct: 278 EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVS 337
Query: 127 --------------------NSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
+ ++S +C+ G++ A + M+ + + ALI
Sbjct: 338 DAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALI 397
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLK 221
G +A ++ AE +L M GL+ A TYT L+ GY K G M K +
Sbjct: 398 NGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT 457
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
P + S L D+ +A +L M GLE + TY L+ G K G+++
Sbjct: 458 PNVVTYTALSDGLCK-----QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512
Query: 282 SVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
R + + + D Y II AL S +D H L M+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE---LDRA-----------HSLLQEMLD 558
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ G++P+ TY LM G+ G ++ +RLL
Sbjct: 559 K-GIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 146/362 (40%), Gaps = 42/362 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V LD + + ++ + + ++ +++ +G+ + VTY + LI+ C+ G
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTY------TALINGLCRAG 404
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A ++L+ M DK + + LI G+ + M A + M Q + P+ TYT
Sbjct: 405 ELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYT 464
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L G K GD+ + + + + F++ + + ++ A + M +A
Sbjct: 465 ALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYI 315
GL+P TYT ++ + ++D LL + G Y +++ +SG E
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
+ W M + + P+ TY LM Y +M S + S
Sbjct: 585 KRL----------LEW-----MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQ 629
Query: 376 LV--NGDYLDIIHALAVSGHGE---------YIDEIISKIQPGVGYSADAANHIYHLINK 424
V N + +I+ + GH + + E+I K G +A + N + L+NK
Sbjct: 630 EVVPNENTYNIL----IKGHCKARNMKEALYFHSEMIEK---GFRLTASSYNALIRLLNK 682
Query: 425 GQ 426
+
Sbjct: 683 KK 684
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 22/285 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+R H L + G PN VTY + L++ + + G ++
Sbjct: 149 NVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTY------NTLVAAFFRAGEVD 202
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA +++ M D + FN+++ G +A M A + M + GL P +Y L+
Sbjct: 203 GAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLV 262
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K G + + + + +F ++ + ++ A ++ M + GL+
Sbjct: 263 GGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQ 322
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY--IDEVS 319
+ T+T L+ G+ K G +D LLA G + + ++G+ +DE
Sbjct: 323 MNEVTFTALIDGFCKKGFLDDA--LLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEAR 380
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
++ H +E GL+P TY+ ++ Y K+ D S
Sbjct: 381 ELL-------HEMEA-----KGLKPDVVTYSTIISAYCKNCDTHS 413
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 109/278 (39%), Gaps = 53/278 (19%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ Y + A++ +GI P+ VT+ + LI C+ GN+E A
Sbjct: 258 YNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTF------TSLIHVMCKAGNLEWAVT 311
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
++ MR++ ++E F ALI G + + A + M Q ++PS Y L+ GY
Sbjct: 312 LVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYC 371
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
G MD A +L M GL+P
Sbjct: 372 MVGRMD-----------------------------------EARELLHEMEAKGLKPDVV 396
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
TY+ ++ Y K+ D S L Q V D + + V + + + A V F
Sbjct: 397 TYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSD--AHVLFK 454
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
N M + GL+P TYT L+ G+ K G+++
Sbjct: 455 N----------MIKLGLQPDEFTYTSLIDGHCKEGNVE 482
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 115/307 (37%), Gaps = 65/307 (21%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNA+L D T S F + S G+ PN TY + LI C G+ + A
Sbjct: 119 YNAVLLALSDASLT-SARRFFDSMLSDGVAPNVYTY------NILIRALCGRGHRKEALS 171
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
IL MR + +N L+ +A ++ AE ++ MM GL+P+ T+ ++ G
Sbjct: 172 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMC 231
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G M+ A + M + GL P
Sbjct: 232 KAGKME-----------------------------------DARKVFDEMMREGLAPDGV 256
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY-------- 314
+Y L+ GY K G + A+ + D + +IH + +G+ E+
Sbjct: 257 SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQM 316
Query: 315 ------IDEVSAIVCFVNICFH-WLEGPM-----MSQAGLEPSAQTYTKLMCGYAKHGDM 362
++EV+ C +L+ + M Q ++PS Y L+ GY G M
Sbjct: 317 RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRM 376
Query: 363 DSIRRLL 369
D R LL
Sbjct: 377 DEARELL 383
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 57/136 (41%), Gaps = 9/136 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK---------LIS 132
D+ Y+ L+ + L KL + P Y L+ + L+
Sbjct: 499 DVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLK 558
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C G + A K+ + M D+ + + V++ LI+GH +A ++ A M Q G P
Sbjct: 559 GFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAP 618
Query: 193 SAQTYTKLMCGYAKHG 208
++ + L+ G ++G
Sbjct: 619 NSTSTISLIRGLFENG 634
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 122/293 (41%), Gaps = 19/293 (6%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ VY + ++ G+ PN VTY LI C+ G ++ A +
Sbjct: 436 YTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY------GALIDGLCKHGELDTANE 489
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ MR K ++ ++N+++ G +A ++ A ++ M AG++P A TYT ++ Y
Sbjct: 490 LLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYC 549
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ GD+D + + + +F + + + + +L M + G+ P A
Sbjct: 550 RLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAI 609
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
TY LM + M++ ++ + + V D + + + GH + + A
Sbjct: 610 TYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPD--SNTYNILIKGHCKARNLKEA----- 662
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ-NGSSLV 377
W M + G P+ +Y L+ + K + R L + G LV
Sbjct: 663 -----WFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLV 710
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 117/289 (40%), Gaps = 59/289 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+++ + +F L ++ SQ I P+ V Y + LI + + G++ A K
Sbjct: 331 YNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVY------TTLIHGFFKLGHVRTANK 384
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M K + LI G Q + + + M GL+P TYT L+ Y
Sbjct: 385 WFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYC 444
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G+M + +F L N M Q G+ P+
Sbjct: 445 KAGEMVN------------------AFSLHN-----------------EMVQMGMTPNIV 469
Query: 266 TYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TY L+ G KHG++D+ LL + G L Y +++ + +G+ I++ ++
Sbjct: 470 TYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN---IEQAIKLM 526
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M AG++P A TYT ++ Y + GD+D +LL +
Sbjct: 527 ------------KEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQE 563
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 123/315 (39%), Gaps = 50/315 (15%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD-------MDSIK 214
+N +IY + + A +L M P +Y+ ++ GY G+ MD ++
Sbjct: 261 YNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQ 320
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
K LKP +++ LL+ AE +L M + P YT L+ G+
Sbjct: 321 IK--GLKPNR-----YTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGF 373
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI-----------------DE 317
K G + + + + S ++ DY+ + G G + DE
Sbjct: 374 FKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDE 433
Query: 318 VSAIVCFVNICFHWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
V+ C G M M Q G+ P+ TY L+ G KHG++D+ L
Sbjct: 434 VTYTTLIDVYC---KAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL 490
Query: 369 L---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLI 422
L + G L Y +++ + +G+ E +++ +++ G DA + I
Sbjct: 491 LDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVA-GIDPDAITYTTVIDAYC 549
Query: 423 NKGQIDAAYRIVNTL 437
G ID A++++ +
Sbjct: 550 RLGDIDKAHKLLQEM 564
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 165/385 (42%), Gaps = 43/385 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ D+ YN ++ +H + +++++GI P+ TY S LIS C G
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY------SSLISCLCNYG 307
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
A+++L M ++ + F+ALI + + AE + M + ++P TY+
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT--NLLILVSSDMASAEG--ILTM 254
L+ G+ H +D K + + CF +T L+ EG +
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKD----CFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGH 311
MSQ GL + TYT L+ G+ + D D+ + + Q S V+ + L ++ L +G
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 312 -------GEYI-------DEVSAIVCFVNICFH------WLEGPMMSQAGLEPSAQTYTK 351
EY+ D + + +C W +S G+ P+ Y
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNT 543
Query: 352 LMCGYAKHG---DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGV 408
++ G+ + G + DS+ + + ++G +G Y +I A G E E+I +++
Sbjct: 544 MISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR-SC 602
Query: 409 GYSADAAN--HIYHLINKGQIDAAY 431
G++ DA+ + ++++ G++D ++
Sbjct: 603 GFAGDASTIGLVTNMLHDGRLDKSF 627
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 122/309 (39%), Gaps = 36/309 (11%)
Query: 72 VHTGELDVPLDISH----YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
+ GE L ISH Y+ + + LAK+ G EP+ VT
Sbjct: 103 ISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL------ 156
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S L++ YC I A +++ M + + F LI+G N + A ++ M Q
Sbjct: 157 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLI---LV 241
G +P TY ++ G K GD+D S+ K+ K ++++ + N +I
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV------IYNTIIDGLCK 270
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD 301
M A + T M G+ P TY+ L+ +G RLL+ +N + +
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 302 IIHAL-AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+ A G+ ++ L M+ ++ ++P TY+ L+ G+ H
Sbjct: 331 FSALIDAFVKEGKLVEA------------EKLYDEMIKRS-IDPDIFTYSSLINGFCMHD 377
Query: 361 DMDSIRRLL 369
+D + +
Sbjct: 378 RLDEAKHMF 386
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 113/275 (41%), Gaps = 40/275 (14%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++ +G +P+ VTY +++ C+ G+I+ A +L+ M ++N +I
Sbjct: 213 QMVQRGCQPDLVTYGTVVNG------LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 266
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKL---MCGYAKHGDM-----DSIKTKI-P 218
G + M A + T M G+ P TY+ L +C Y + D D I+ KI P
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 219 SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
++ S L F + + AE + M + ++P TY+ L+ G+ H
Sbjct: 327 NVVTFSALIDAF---------VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 279 DMDSVRRLLAQSGSSLVNGDYLD--IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM 336
+D + + +++ D + ++ + G + + F
Sbjct: 378 RLDEAKHMFEL----MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE---------- 423
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
MSQ GL + TYT L+ G+ + D D+ + + Q
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 128/331 (38%), Gaps = 50/331 (15%)
Query: 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY--GHSQANDMASA 178
+ ++ +KL+S + E + E M +T IS ++ I+ + + ++ A
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQM--QTLGISHDLYTYSIFINCFCRRSQLSLA 137
Query: 179 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQ 233
+L M + G EP T + L+ GY + + + KP +F
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD-------TFT 190
Query: 234 LTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
T L+ + + + + A ++ M Q G +P TY ++ G K GD+D LL +
Sbjct: 191 FTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKME 250
Query: 292 SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
+ D +I+ + G +Y A+ F M G+ P TY+
Sbjct: 251 KGKIEADV--VIYNTIIDGLCKYKHMDDALNLFTE----------MDNKGIRPDVFTYSS 298
Query: 352 LMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGH----GEYIDEIISK- 403
L+ +G RLL+ +N + + +I A G + DE+I +
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 404 IQPGV-GYSA-----------DAANHIYHLI 422
I P + YS+ D A H++ L+
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 128/313 (40%), Gaps = 55/313 (17%)
Query: 79 VPLDISHYNALLRVYLDNEHT---FSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
V ++ YN L+ Y + L ++ + GI PN VT+ LI +C
Sbjct: 194 VSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDG------FC 247
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+D N+ A K+ M + + +N+LI G + A + M + L+P+
Sbjct: 248 KDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNII 307
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ-----LTNLLILVSS-----DM 245
T+ L+ G+ K+ +K ELF Q +T IL+ + +M
Sbjct: 308 THNALLNGFCKN----------KMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENM 357
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDI 302
A + +M G+ P TY L+ G + GD+++ R L+++ + + D Y +
Sbjct: 358 EDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNIL 417
Query: 303 IHALAVSGHGE----YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
I +L G + +DE M + GL+PS TY ++ GY K
Sbjct: 418 IDSLCNKGEMKKALRLLDE-------------------MCRKGLKPSQLTYNTMIDGYCK 458
Query: 359 HGDMDSIRRLLAQ 371
G++ + L +Q
Sbjct: 459 EGNLRAALNLRSQ 471
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 88/209 (42%), Gaps = 13/209 (6%)
Query: 66 CEDPFSVHTGEL--DVPL-----DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNR 118
C++ GEL D+P +++ YN L+ Y +E+ + +G+ P+
Sbjct: 317 CKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDV 376
Query: 119 VTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASA 178
TY LI+ C+ G++E A ++ M K +N LI +M A
Sbjct: 377 STYNCLIAG------LCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKA 430
Query: 179 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL 238
+L M + GL+PS TY ++ GY K G++ + ++ L ++ +
Sbjct: 431 LRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKG 490
Query: 239 ILVSSDMASAEGILTMMSQAGLEPSAQTY 267
+ A G+L M + GL P+ TY
Sbjct: 491 FCKKDKLEDANGLLNEMLEKGLIPNRMTY 519
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 120/298 (40%), Gaps = 40/298 (13%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
FN +I G + + A I+ M G+ + TY L+ GY K G + + LK
Sbjct: 166 FNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILK 225
Query: 222 PQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+C + N+LI ++++A + M++ G++P+ TY L+ G +G
Sbjct: 226 EMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNG 285
Query: 279 DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH---------GEYIDEVSAIVCFVNICF 329
++ L Q +S + + I H ++G GE D+
Sbjct: 286 KVNEATALRDQMVNSCLKPNI--ITHNALLNGFCKNKMVKQAGELFDD------------ 331
Query: 330 HWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIH 386
M + G+ P+ TY L+ Y K +M+ ++ R++ G Y +I
Sbjct: 332 -------MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIA 384
Query: 387 ALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSA 441
L G E ++S++ AD + I L NKG++ A R+++ + R
Sbjct: 385 GLCRKGDLEAARNLVSEMDTK-HLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKG 441
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 131/331 (39%), Gaps = 57/331 (17%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS--------- 126
E+ P D+ Y ++ Y + L+++ ++G+E N V Y +I+
Sbjct: 278 EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVS 337
Query: 127 --------------------NSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
+ ++S +C+ G++ A + M+ + + ALI
Sbjct: 338 DAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALI 397
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLK 221
G +A ++ AE +L M GL+ A TYT L+ GY K G M K +
Sbjct: 398 NGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVT 457
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
P + S L D+ +A +L M GLE + TY L+ G K G+++
Sbjct: 458 PNVVTYTALSDGLCK-----QGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512
Query: 282 SVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
R + + + D Y II AL S +D H L M+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKE---LDRA-----------HSLLQEMLD 558
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ G++P+ TY LM G+ G ++ +RLL
Sbjct: 559 K-GIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 146/362 (40%), Gaps = 42/362 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V LD + + ++ + + ++ +++ +G+ + VTY + LI+ C+ G
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTY------TALINGLCRAG 404
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A ++L+ M DK + + LI G+ + M A + M Q + P+ TYT
Sbjct: 405 ELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYT 464
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L G K GD+ + + + + F++ + + ++ A + M +A
Sbjct: 465 ALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEA 524
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYI 315
GL+P TYT ++ + ++D LL + G Y +++ +SG E
Sbjct: 525 GLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGG 584
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
+ W M + + P+ TY LM Y +M S + S
Sbjct: 585 KRL----------LEW-----MLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQ 629
Query: 376 LV--NGDYLDIIHALAVSGHGE---------YIDEIISKIQPGVGYSADAANHIYHLINK 424
V N + +I+ + GH + + E+I K G +A + N + L+NK
Sbjct: 630 EVVPNENTYNIL----IKGHCKARNMKEALYFHSEMIEK---GFRLTASSYNALIRLLNK 682
Query: 425 GQ 426
+
Sbjct: 683 KK 684
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 137/327 (41%), Gaps = 53/327 (16%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E V ++ YN L+R + + K+E++G PN VTY LI YC
Sbjct: 198 ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG------YC 251
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ I+ K+L M K + +N +I G + M +LT M++ G
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS---------DMA 246
TY L+ GY K G+ +L +E+ LT +I +S +M
Sbjct: 312 TYNTLIKGYCKEGNFHQ------ALVMHAEM---LRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDII 303
A L M GL P+ +TYT L+ G+++ G M+ R+L + +G S Y +I
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+ V+G E D ++ + M + GL P +Y+ ++ G+ + D+D
Sbjct: 423 NGHCVTGKME--DAIAVL-------------EDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 364 S---IRRLLAQNG--------SSLVNG 379
++R + + G SSL+ G
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQG 494
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 111/288 (38%), Gaps = 53/288 (18%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD YN L++ Y + A++ G+ P+ +TY + LI C+ GN+
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY------TSLIHSMCKAGNM 361
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A + L+ MR + +E + L+ G SQ M A +L M+ G PS TY L
Sbjct: 362 NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ G+ V+ M A +L M + GL
Sbjct: 422 INGHC-----------------------------------VTGKMEDAIAVLEDMKEKGL 446
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
P +Y+ ++ G+ + D+D R+ + + D I ++ + G E A
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD--TITYSSLIQGFCEQRRTKEA 504
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
C + E M + GL P TYT L+ Y GD++ +L
Sbjct: 505 -------CDLYEE---MLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 122/295 (41%), Gaps = 32/295 (10%)
Query: 110 ESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
++ G P ++Y ++ ++ + SK NI A + + M + + +N LI G
Sbjct: 161 QAHGFMPGVLSYNAVL-DATIRSK----RNISFAENVFKEMLESQVSPNVFTYNILIRGF 215
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC 229
A ++ A + M G P+ TY L+ GY K +D + S+ +
Sbjct: 216 CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL 275
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
S+ + + M +LT M++ G TY L+ GY K G+ + L
Sbjct: 276 ISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF---HQALVM 332
Query: 290 SGSSLVNG------DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
L +G Y +IH++ +G+ +N +L+ M GL
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGN-------------MNRAMEFLD--QMRVRGLC 377
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGSSLVNGDYLDIIHALAVSGHGE 395
P+ +TYT L+ G+++ G M+ R+L + NG S Y +I+ V+G E
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 9/154 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK---------LIS 132
D+ Y+ L+ T L KL + P+ VTY LI N LI
Sbjct: 554 DVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C G + A ++ E M K +N +I+GH +A D+ A + M ++G
Sbjct: 614 GFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL 673
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL 226
T L+ K G ++ + + I + EL
Sbjct: 674 HTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL 707
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 114/278 (41%), Gaps = 39/278 (14%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+GI+P+ +TY S LI +C+ + A + E M P E + ALI +
Sbjct: 479 KGIKPDTITY------SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT---------KIPS-LK 221
D+ A + M + G+ P TY+ L+ G K K +PS +
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Query: 222 PQSELFLCFSFQLTNLLILV-----SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
+ + C + + +++ L+ M A+ + M +P Y ++ G+ +
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 277 HGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
GD+ L + +SG L + ++ AL G ++E+++++ H L
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK---VNELNSVI------VHVLR 703
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+S+A A+ ++ + G+MD + +LA+
Sbjct: 704 SCELSEA---EQAKVLVEI---NHREGNMDVVLDVLAE 735
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 124/301 (41%), Gaps = 62/301 (20%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G++E A ++ + +RDK S FN+LIYG + + A +L + G
Sbjct: 437 MIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHG 496
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS-----IKTKIPSLKPQSELF------LCFSFQLTNLL 238
LEPSA TYT LM Y + G+++ ++ + ++P + LC +L +
Sbjct: 497 LEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESV 556
Query: 239 ILV------------------------SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
L+ + DM A +L M LEP+ TY L+ G
Sbjct: 557 QLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGL 616
Query: 275 AKHGDMDSVRRLLAQSGSSLVN----------------GD---YLDIIHALAVSGHGEYI 315
++GD++ R+L +N GD + + H + G I
Sbjct: 617 CRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSI 676
Query: 316 DEVSAIV------CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ SA++ C +N ++ +M G+ P + + ++ + + G + S+ LL
Sbjct: 677 KDYSAVINRLCKRCLINEAKYYF--CIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELL 734
Query: 370 A 370
A
Sbjct: 735 A 735
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/344 (22%), Positives = 137/344 (39%), Gaps = 38/344 (11%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
L++ Y+ LL L ++E+ ++P+ VTY S LI C+ G +
Sbjct: 324 LNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTY------SILIHGLCKQGKV 377
Query: 141 EGATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A ++ E ++ FP S + ++ G + ++ A + + L P Y
Sbjct: 378 QQAIQLYKEMCFNRIFPNSFA-HSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNI 436
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
++ GY K GD++ L+ ++ +F + + A +L + G
Sbjct: 437 MIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHG 496
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG---DYLDIIHALA--------- 307
LEPSA TYT LM Y + G+++ + LL + + Y +I L
Sbjct: 497 LEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESV 556
Query: 308 -----VSGHGEYIDEV---SAIVCFVNI-----CFHWLEGPMMSQAGLEPSAQTYTKLMC 354
+ G D++ + I CF F L+ ++ LEP+ TY L+
Sbjct: 557 QLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIH--NLEPTPATYNVLID 614
Query: 355 GYAKHGDMDSIRRLLA---QNGSSLVNGDYLDIIHALAVSGHGE 395
G ++GD++ R+L +L Y +I A V G +
Sbjct: 615 GLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQ 658
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 116/281 (41%), Gaps = 54/281 (19%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
L +G++P+ VTY + LI +CQ GNIE A ++ + F ++ +++ L+
Sbjct: 282 LTDEGLKPDLVTY------TVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
+ + A +L M L+P TY+ L+ G K G ++ I K +
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQG---KVQQAIQLYKE-----M 387
Query: 229 CF------SFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
CF SF + +L + ++ A + + L P Y ++ GY K GD+
Sbjct: 388 CFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDV 447
Query: 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
+ RL + + +IV F ++ + + + + +A
Sbjct: 448 EEAVRLYKRLRDKAIT----------------------PSIVTFNSLIYGFCKNRKVVEA 485
Query: 341 ----------GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
GLEPSA TYT LM Y + G+++ + LL +
Sbjct: 486 RRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLE 526
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 104/240 (43%), Gaps = 9/240 (3%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ Y + + + L ++ + IEP VTY + +I C+ +E + +
Sbjct: 504 YTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTY------TVVIKGLCKQRKLEESVQ 557
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+LE MR K + +N +I +A DM A +L M LEP+ TY L+ G
Sbjct: 558 LLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLC 617
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
++GD++ + SL+ ++ ++ V D A + M + G E S +
Sbjct: 618 RYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIK 677
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIV 322
Y+ ++ K ++ + S V+ D + +++A +GH + E+ A++
Sbjct: 678 DYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVM 737
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 110/288 (38%), Gaps = 51/288 (17%)
Query: 106 LAKLESQGIEPNRVTYQQLISN--------------------------SKLISKYCQDGN 139
L K++ Q + P+ TY L+ N S ++ C
Sbjct: 106 LVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSR 165
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
A L K F S FN ++ + + A+ MM + G+ P +Y
Sbjct: 166 FRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNI 225
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT----NLLILVSSDMASAEGILTMM 255
L+ G G M+ ++ Q ++++ +LL L+S + E I M+
Sbjct: 226 LIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMS---GAREIIQKML 282
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
+ GL+P TYT L+CG+ + G+++ +RR L SG L Y ++ +L G
Sbjct: 283 TDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQ- 341
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+DE ++ M L+P TY+ L+ G K G
Sbjct: 342 --VDEALQLL------------YEMEANNLQPDLVTYSILIHGLCKQG 375
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 125/295 (42%), Gaps = 56/295 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L R Y T D + +++ + + PN T +++ YC++GN+
Sbjct: 233 DVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTC------GIIVNGYCKEGNMI 286
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M++ + +FN+LI G D + LT+M + G++P T++ +M
Sbjct: 287 EALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDVITFSTIM 346
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
++ G MD + E+F +DMA +AG+E
Sbjct: 347 NAWSSAGLMDKCQ----------EIF---------------NDMA----------KAGIE 371
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P ++ L GY + G+ ++ +L S V + +I +SG +A
Sbjct: 372 PDIHAFSILAKGYVRAGETENAESVLTSMAKSGVRPNV--VICTTIISGWCSAGKMENAK 429
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH---GDMDSIRRLLAQNG 373
+ + +C + G+ P+ +T+ L+ GYA+ G + + +L+ + G
Sbjct: 430 MVYEKMC----------EIGISPNLKTFETLIWGYAEARQPGKAEELLQLMEEKG 474
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/332 (20%), Positives = 136/332 (40%), Gaps = 34/332 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ +H S ++K+E G++P+ + Y + +I+ + + GN++ A K
Sbjct: 96 YTTLVAALTKLKHFESIFLLISKVEENGMKPDSILY------NAMINAFSESGNVKEAMK 149
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG-LEPSAQTYTKLMCGY 204
I + M+D + FN LI G+ A +L +MS G ++P+ +TY L+ +
Sbjct: 150 IFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAW 209
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
+++ + + ++ + + AE ++ M + P+
Sbjct: 210 CSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNE 269
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSG-----------SSLVNGDYLDIIHALAVSGHGE 313
+T ++ GY K G+M R + + +SL+ G +LDI V
Sbjct: 270 RTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKG-FLDITDTDGVDEALT 328
Query: 314 YIDEVSA---IVCFVNICFHWLEGPM----------MSQAGLEPSAQTYTKLMCGYAKHG 360
++E ++ F I W + M++AG+EP ++ L GY + G
Sbjct: 329 LMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAG 388
Query: 361 DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSG 392
+ ++ +L S V + +I +SG
Sbjct: 389 ETENAESVLTSMAKSGVRPNV--VICTTIISG 418
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 53 WCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ 112
+C E GN+ F EL V ++ +N+L++ +LD T + L +E
Sbjct: 279 YCKE-----GNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEY 333
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G++P+ +T+ S +++ + G ++ +I M F+ L G+ +A
Sbjct: 334 GVKPDVITF------STIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRA 387
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+ +AE +LT M+++G+ P+ T ++ G+ G M++ K + E+ + +
Sbjct: 388 GETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKM---CEIGISPNL 444
Query: 233 QLTNLLILVSSDM---ASAEGILTMMSQAGLEPSAQT 266
+ LI ++ AE +L +M + G+ P T
Sbjct: 445 KTFETLIWGYAEARQPGKAEELLQLMEEKGVFPEKST 481
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 43 VLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSP 102
V+ F + + W S + C++ F+ + + DI ++ L + Y+ T +
Sbjct: 339 VITFSTIMNAWSSAGLMDK----CQEIFN-DMAKAGIEPDIHAFSILAKGYVRAGETENA 393
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
L + G+ PN V + +IS +C G +E A + E M + + F
Sbjct: 394 ESVLTSMAKSGVRPNVVIC------TTIISGWCSAGKMENAKMVYEKMCEIGISPNLKTF 447
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
LI+G+++A AE +L +M + G+ P T
Sbjct: 448 ETLIWGYAEARQPGKAEELLQLMEEKGVFPEKST 481
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 130/308 (42%), Gaps = 33/308 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ D+ YN + N + L K+ + I PN VTY LI+ + ++G
Sbjct: 299 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING------FVKEG 352
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
I A ++ M + +NALI GH D A +L M AGL + TY
Sbjct: 353 KIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYG 412
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G KH + K + ++ + ++ + + + + A ++ M +
Sbjct: 413 TLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKD 472
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSG--------SSLV-----NGDYLDI 302
G+ P TY+ L+ G+ + G++ S + ++ +SG S+L+ +G+ +
Sbjct: 473 GVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEA 532
Query: 303 IHALAV---SGHGEYIDEVSAIVCFVNICFHWLEGPM------MSQAGLEPSAQTYTKLM 353
+ AV +GHG D + V ++C G MS+ GL P++ TY ++
Sbjct: 533 MKVYAVMNCNGHGA--DHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCII 590
Query: 354 CGYAKHGD 361
GY GD
Sbjct: 591 NGYGSIGD 598
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 114/274 (41%), Gaps = 30/274 (10%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L ++E G P VTY + L++ YC+ G + A +++++M K +N
Sbjct: 254 NLLKQMEENGFVPTIVTY------NTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYN 307
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
I + A A +L M + + P+ TY L+ G+ K G I
Sbjct: 308 VFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEG---KIGVAAQVFNEM 364
Query: 224 SELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
S+ L + N LI D A +L M AGL + TY L+ G KH
Sbjct: 365 SKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKF 424
Query: 281 DSVRRLLAQSG-SSLVNGD--YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
+ +RLL + + +V G Y +I L +G +DE +V M
Sbjct: 425 ELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNG---MLDEAVQLV------------GNM 469
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ G+ P TY+ L+ G+ + G++ S + ++ +
Sbjct: 470 YKDGVNPDVITYSSLINGFCRVGNIKSAKEIICR 503
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 79/206 (38%), Gaps = 41/206 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y++L+ + + S + + ++ G+ N++ Y LI N +CQ GN+
Sbjct: 477 DVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYN------FCQHGNVT 530
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ M N L+ + + AE L MS+ GL P++ TY ++
Sbjct: 531 EAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCII 590
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY GD P + FSF M + G
Sbjct: 591 NGYGSIGD------------PLNA----FSF-------------------FDDMIKCGQH 615
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL 287
PS TY L+ G K G++ ++ L
Sbjct: 616 PSFFTYGSLLKGLCKGGNLVEAKKFL 641
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 115/290 (39%), Gaps = 22/290 (7%)
Query: 84 SHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGA 143
S ++ L+RVYL + + G +P+ T ++++ +D E
Sbjct: 164 SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILAS------MVKDKRTELV 217
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+ M DK + G FN LI G ++ A +L M + G P+ TY L+
Sbjct: 218 WSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 277
Query: 204 YAKHGDMDSIKTKIPSLKPQS-ELFLC-FSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
Y K G + I + + E +C ++ + NL + A A +L M + +
Sbjct: 278 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNL--CTNHRSAKAYLLLKKMRKEMIS 335
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P+ TY L+ G+ K G + ++ + ++ + + + + GH D A+
Sbjct: 336 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNC--VTYNALIGGHCHVGDFEEAL 393
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ M AGL + TY L+ G KH + +RLL +
Sbjct: 394 RLLDH----------MEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLER 433
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 143/359 (39%), Gaps = 68/359 (18%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N+L R+ H L+K+ GI+P+ VT+ + LI+ C +G I+ A ++
Sbjct: 129 NSLCRL----SHIHFAVSVLSKMFKLGIQPDSVTF------TTLINGLCNEGRIKEAVEL 178
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
M + + F L+ + ++ A + M++ G+EP+ TY LM GY
Sbjct: 179 FNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGY-- 236
Query: 207 HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQT 266
C + M A + +M G PS +
Sbjct: 237 ----------------------CLRLE-----------MNDASKVFEIMVGKGCAPSVHS 263
Query: 267 YTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNG--DYLDIIHALAVSGHGEYIDEVSAIVC 323
Y+ L+ GY K +D + LL Q S L+ Y ++ L H + E +
Sbjct: 264 YSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLC---HASSLLEAQEL-- 318
Query: 324 FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD--- 380
F +C +G+ P+ +TY+ L+ G KHG ++ +LL + D
Sbjct: 319 FKKMC----------SSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVL 368
Query: 381 YLDIIHALAVSGHGEYIDEIISKI-QPGVGYSADAAN-HIYHLINKGQIDAAYRIVNTL 437
Y +I + ++G E E+ SK+ G+ S N I L+ +G D AY++ +
Sbjct: 369 YNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKM 427
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 12/217 (5%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E V +I YNAL+ Y + + +G P+ +Y S LI+ YC
Sbjct: 219 EKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSY------SILINGYC 272
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ I+ A +L M +K + +N L+ G A+ + A+ + M +G+ P+ +
Sbjct: 273 KSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLR 332
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGIL 252
TY+ L+ G KHG ++ + S++ + L L N+LI ++ + A+ +
Sbjct: 333 TYSILLDGLCKHGHLEEALKLLTSMQERK---LEPDIVLYNILIQGMFIAGKLEVAKELF 389
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ + G+ PS +TY ++ G K G D +L +
Sbjct: 390 SKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRK 426
>gi|307109850|gb|EFN58087.1| hypothetical protein CHLNCDRAFT_34493 [Chlorella variabilis]
Length = 594
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 1/156 (0%)
Query: 133 KYCQD-GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
K C D G + A ++L+ M P +N L+ GH +A + ++ M+ G++
Sbjct: 243 KACVDVGRLREAERLLQRMAAAGAPPDVRAYNILLAGHGRAGATGAMARLMQRMAAGGVQ 302
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
PSA TY L+ GY + D+ + +++ + + +A+AE +
Sbjct: 303 PSAVTYNTLVDGYVRARDLAGARGAAERAATAGVALDVWTYSTLIKGYVQAGQLAAAETV 362
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
L M+ AG++PS TYT L+ G+ + GDM + RRL+
Sbjct: 363 LGDMAAAGVQPSCVTYTTLVDGHVRAGDMQAARRLV 398
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
P D+ YN LL + T + + ++ + G++P+ VTY + L+ Y +
Sbjct: 266 APPDVRAYNILLAGHGRAGATGAMARLMQRMAAGGVQPSAVTY------NTLVDGYVRAR 319
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ GA E + ++ LI G+ QA +A+AE +L M+ AG++PS TYT
Sbjct: 320 DLAGARGAAERAATAGVALDVWTYSTLIKGYVQAGQLAAAETVLGDMAAAGVQPSCVTYT 379
Query: 199 KLMCGYAKHGDMDSIKTKIPSLK 221
L+ G+ + GDM + + + +++
Sbjct: 380 TLVDGHVRAGDMQAARRLVQAMR 402
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 115/281 (40%), Gaps = 18/281 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y LL + DN S F +++E G P+ VT+ + L+ C+ GN
Sbjct: 329 DRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTF------TILVDALCKAGNFG 382
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A L+ MRD+ + +N LI G + + + A I M G++P+A TY +
Sbjct: 383 EAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFI 442
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
Y K GD S +K + + + + + A+ I + GL
Sbjct: 443 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 502
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P + TY +M Y+K G++D +LL++ + D + + + + +DE
Sbjct: 503 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEA--- 559
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
W M + L+P+ TY L+ G K+G +
Sbjct: 560 ---------WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 591
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 122/295 (41%), Gaps = 48/295 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D++ YN LL Y + + ++ + EPN +T+ +IS + GN++
Sbjct: 821 DVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISG------LVKAGNVD 874
Query: 142 GATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A + + M D+ F + + LI G S++ + A+ + MS G P+ Y L
Sbjct: 875 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNIL 934
Query: 201 MCGYAKHGDMDS--------IKTKI-PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
+ G+ K G+ D+ +K + P LK S L C L ++ D EG+
Sbjct: 935 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC-------LCMVGRVD----EGL 983
Query: 252 --LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSL-VNGD---YLDIIHA 305
+ ++GL P Y ++ G K ++ L + S + D Y +I
Sbjct: 984 HYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILN 1043
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
L ++G ++E I + +AGLEP+ T+ L+ GY+ G
Sbjct: 1044 LGIAGM---VEEAGKIY------------NEIQRAGLEPNVFTFNALIRGYSLSG 1083
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 109/271 (40%), Gaps = 24/271 (8%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L +++ +G P+ VTY + LI C ++ A ++ M+ +
Sbjct: 281 EILKRMDDEGCGPDVVTY------TVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYI 334
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
L+ S D+ S + M + G P T+T L+ K G+ K+ ++ Q
Sbjct: 335 TLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQ 394
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
L ++ +L + A I M G++P+A TY + Y K GD S
Sbjct: 395 GILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSA 454
Query: 284 RRLLAQSGSSLVNGDYLDI---IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
+ + + + + +++LA +G ++ F+ L+
Sbjct: 455 LETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI----------FYGLK-----DI 499
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
GL P + TY +M Y+K G++D +LL++
Sbjct: 500 GLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE 530
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 89/230 (38%), Gaps = 22/230 (9%)
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G + A L MR+ F ++ +N LI+ ++ A + M G PS QTY
Sbjct: 169 GGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTY 228
Query: 198 TKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ LM G K D++S+ + + LKP ++F + ++ + + A IL
Sbjct: 229 SSLMVGLGKRRDIESVMGLLKEMETLGLKPN-----VYTFTICIRVLGRAGKINEAYEIL 283
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
M G P TYT L+ +D + + A+ + D + I L
Sbjct: 284 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDN 343
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+D V+ W E M + G P T+T L+ K G+
Sbjct: 344 RDLDSVNQF---------WSE---MEKDGHVPDVVTFTILVDALCKAGNF 381
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 108/272 (39%), Gaps = 35/272 (12%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
L+ G+ P+ VTY ++ Y + G I+ A K+L M + V N+LI
Sbjct: 496 LKDIGLVPDSVTYNMMMKC------YSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINT 549
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---------KTKIPS 219
+A+ + A + M + L+P+ TY L+ G K+G + K P+
Sbjct: 550 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 609
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
+ LF C + + ++ A +L M G P TY ++ G K+G
Sbjct: 610 TITFNTLFDC---------LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 660
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVSAIVCFVNIC------FHW- 331
+ Q LV D++ + L V G D I F+ C W
Sbjct: 661 VKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWE 719
Query: 332 -LEGPMMSQAGLEPSAQTYTKLMC-GYAKHGD 361
L G ++++AG++ + +L+ G + GD
Sbjct: 720 DLMGSILAEAGIDNAVSFSERLVANGICRDGD 751
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 8/207 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+ L + +ES G++P TY I Y + G+
Sbjct: 399 NLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFID------YYGKSGDSV 452
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + E M+ K + NA +Y ++A A+ I + GL P + TY +M
Sbjct: 453 SALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMM 512
Query: 202 CGYAKHGDMD-SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
Y+K G++D +IK ++ E + L N L + + A + M + L
Sbjct: 513 KCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTL-YKADRVDEAWKMFMRMKEMKL 571
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+P+ TY L+ G K+G + L
Sbjct: 572 KPTVVTYNTLLAGLGKNGKIQEAIELF 598
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 148/365 (40%), Gaps = 58/365 (15%)
Query: 109 LESQGIEPNRVTY-QQLISNSKLISKYCQDG---------------NIEGATKILE-FMR 151
L GI+ N V++ ++L++N C+DG N GA + E F +
Sbjct: 726 LAEAGID-NAVSFSERLVANG-----ICRDGDSILVPIIRYSFKHNNASGARMLFEKFTK 779
Query: 152 DKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 211
D +N LI G +A+ + A+ + + G P TY L+ Y K G +D
Sbjct: 780 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKID 839
Query: 212 SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI-------LTMMSQAGLEPSA 264
+ + C +T+ +++ S + A + +MS P+A
Sbjct: 840 ELFEIYKEMSAHE----CEPNTITHNIVI--SGLVKAGNVDDALDLYYDLMSDRDFSPTA 893
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF 324
TY L+ G +K G + ++L G S I+ + ++G G+ + +A F
Sbjct: 894 CTYGPLIDGLSKSGRLYEAKQLF--EGMSDYGCRPNCAIYNILINGFGKAGEADAACALF 951
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDI 384
M + G+ P +TY+ L+ G +D + S +N D +
Sbjct: 952 ----------KRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDV--V 999
Query: 385 IHALAVSGHGEY--IDE---IISKIQPGVGYSADAANHIYHLIN---KGQIDAAYRIVNT 436
+ L ++G G++ ++E + ++++ G + D + ++N G ++ A +I N
Sbjct: 1000 CYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNE 1059
Query: 437 LARSA 441
+ R+
Sbjct: 1060 IQRAG 1064
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Query: 110 ESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
+S+GI P+ TY LI N + G +E A KI ++ + FNALI G+
Sbjct: 1026 KSRGITPDLYTYNSLILNLGIA------GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1079
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
S + A + M G P+ TY +L
Sbjct: 1080 SLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
Score = 39.7 bits (91), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 51/134 (38%), Gaps = 12/134 (8%)
Query: 238 LILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG 297
L+L S A + M G PS QTY+ LM G K D++SV LL + + +
Sbjct: 199 LLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKP 258
Query: 298 DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
+ + V G I+E I+ M G P TYT L+
Sbjct: 259 NVYTFTICIRVLGRAGKINEAYEIL------------KRMDDEGCGPDVVTYTVLIDALC 306
Query: 358 KHGDMDSIRRLLAQ 371
+D + + A+
Sbjct: 307 TARKLDCAKEVFAK 320
>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
Length = 941
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 113/279 (40%), Gaps = 24/279 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN +++ + + + +++ + P T+ +I + + G +
Sbjct: 538 DVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHG------FARAGEMR 591
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + MR + FNAL+ G + M A IL M+ AG+ P TYT +M
Sbjct: 592 RALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIM 651
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYA GD ++ + F+++ S M SA + M+ +
Sbjct: 652 HGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIP 711
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
+ Y L+ G+A+ GD+ L+ Q V D Y I+A +G D +
Sbjct: 712 RNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAG-----DML 766
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
A M AG++P+ +TYT L+ G+A
Sbjct: 767 RATKTMEE----------MEAAGVKPNVKTYTTLIHGWA 795
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/412 (19%), Positives = 158/412 (38%), Gaps = 70/412 (16%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +L+ Y + K+ +GIE + VTY S ++ + + GN E A
Sbjct: 332 YTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTY------SIVVGGFAKFGNAEAADC 385
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM---- 201
+ +++ ++ ++ +IY + QA +M AE ++ M + G++ Y +M
Sbjct: 386 WFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYT 445
Query: 202 -----------------CGYA----KHGDMDSIKTKIPSLKPQSEL------------FL 228
CG+A +G + ++ TKI + E+
Sbjct: 446 MIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMK 505
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
+S + L L D +A + + + GL+P Y ++ + G+MD ++
Sbjct: 506 TYSMLINGFLKL--KDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVK 563
Query: 289 QSGSSL---VNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ + ++ IIH A +G E+ MM ++G P+
Sbjct: 564 EMQKERCRPTSRTFMPIIHGFARAGEMRRALEIF---------------DMMRRSGCIPT 608
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIIS 402
T+ L+ G + M+ +L + + V+ D Y I+H A G E +
Sbjct: 609 VHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFT 668
Query: 403 KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFL 454
K++ G D Y + K + R+ + LA + +N +++P F+
Sbjct: 669 KMR-NEGLQLDV--FTYEALLKACCKSG-RMQSALAVTREMNAQKIPRNTFV 716
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 79/197 (40%), Gaps = 41/197 (20%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V D Y ++ Y T ++ K+ ++G++ + TY+ L+ C+ G
Sbjct: 640 VSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKAC------CKSG 693
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A + M + P + V+N LI G ++ D+ A ++ M+Q G++P TYT
Sbjct: 694 RMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYT 753
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
+ K G DM A + M A
Sbjct: 754 SFINACCKAG-----------------------------------DMLRATKTMEEMEAA 778
Query: 259 GLEPSAQTYTKLMCGYA 275
G++P+ +TYT L+ G+A
Sbjct: 779 GVKPNVKTYTTLIHGWA 795
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 99/235 (42%), Gaps = 18/235 (7%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++ Y + G++ A + E MR + S V+ +LI+ ++ DM A + M++ G
Sbjct: 300 MVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEG 359
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+E S TY+ ++ G+AK G+ ++ K + + + + +M AE
Sbjct: 360 IEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAE 419
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHAL 306
++ M + G++ Y +M GY + + V + L + G + Y +I+
Sbjct: 420 ALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMY 479
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
G EVS MM G++ + +TY+ L+ G+ K D
Sbjct: 480 TKIGKVSKALEVSK---------------MMKSVGIKHNMKTYSMLINGFLKLKD 519
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD+ Y ALL+ + S ++ +Q I N Y LI + + G+I
Sbjct: 677 LDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDG------WARRGDI 730
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A +++ M + + + I +A DM A + M AG++P+ +TYT L
Sbjct: 731 WEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTL 790
Query: 201 MCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL 238
+ G+A + + K+ LKP ++ C +T+LL
Sbjct: 791 IHGWANASLPEKALSCFEELKLAGLKPDKAVYHCL---MTSLL 830
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P + YN L+ + + D + ++ +G++P+ TY + I+ C+ G
Sbjct: 710 IPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTY------TSFINACCKAG 763
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ ATK +E M + + LI+G + A+ A + AGL+P Y
Sbjct: 764 DMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYH 823
Query: 199 KLM 201
LM
Sbjct: 824 CLM 826
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 115/294 (39%), Gaps = 39/294 (13%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
F ++ +++ DM A M G++PS+ YT L+ YA DM+ + ++
Sbjct: 297 FGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEA---LSCVR 353
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS---AQTYTKLMCGYAKHG 278
+E + S ++++ + +AE +A + A Y ++ Y +
Sbjct: 354 KMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQAC 413
Query: 279 DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
+MD L+ + ++ LDI H + + G+ +E ++ F +
Sbjct: 414 NMDRAEALVREMEEEGIDAP-LDIYHTM-MDGYTMIRNEEKCLIVF----------KRLK 461
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNG--------SSLVNG--DYLDII 385
+ G PS TY L+ Y K G + + +++ G S L+NG D
Sbjct: 462 ECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWT 521
Query: 386 HALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLAR 439
+A AV + D I ++P V N I G +D A +V + +
Sbjct: 522 NAFAV-----FEDVIKDGLKPDV---VLYNNIIKAFCGMGNMDRAIHMVKEMQK 567
>gi|218197756|gb|EEC80183.1| hypothetical protein OsI_22045 [Oryza sativa Indica Group]
Length = 577
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 39/289 (13%)
Query: 134 YCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS--AEGILTMMSQAGLE 191
Y + G + A ++L+ MRD+ FN LI +++ +A+ A +L + QAGL
Sbjct: 4 YARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVALELLHEVRQAGLR 63
Query: 192 PSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILV---SSDM 245
P A TY L+ ++ ++D ++ ++ + + + +L+ N ++ V
Sbjct: 64 PDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWT------YNAMVSVHGRCGKA 117
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDI 302
AE + + + G +P A TY L+ +AK GD++ V R+ L ++G Y +
Sbjct: 118 QEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGITYNTM 177
Query: 303 IHALAVSGH-----GEYIDEVSAIVCFVNICFHWLE----GPM------------MSQAG 341
IH G G Y DE+ AI C + + + G M M+ AG
Sbjct: 178 IHMYGKMGRLDLALGLY-DEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAG 236
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAV 390
L+P+ T++ L+C YAK G D R + S V D L + L V
Sbjct: 237 LKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDV 285
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 110/298 (36%), Gaps = 55/298 (18%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG-NIEGATKILEFMRDKTFPISEGVF 162
+ L ++ G+ P+ +TY LIS C G N++ A + E M +
Sbjct: 52 ELLHEVRQAGLRPDAITYNTLISA-------CSQGSNLDDAVAVFEEMIASECRPDLWTY 104
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK-------- 214
NA++ H + AE + + + G +P A TY L+ +AK GD++ ++
Sbjct: 105 NAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVK 164
Query: 215 -----------TKIPSLKPQSELFLCFSF-----------QLTNLLILVSS-----DMAS 247
T I L L +LV S ++
Sbjct: 165 AGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISE 224
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
A +L M+ AGL+P+ T++ L+C YAK G D R + S V D L + L
Sbjct: 225 AGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLD 284
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
V DE ++ M + G +P Y L+ AK + D I
Sbjct: 285 VFARS---DETRKLMVLYRA---------MIKDGYKPDDGLYQVLLAALAKGNEHDEI 330
>gi|356558306|ref|XP_003547448.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
mitochondrial-like [Glycine max]
Length = 1064
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 41/251 (16%)
Query: 95 DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT 154
D E +F+ FLAK+ +G PN+VTY S ++S YC+ G +E A + E M+D
Sbjct: 280 DVEKSFT---FLAKMIKEGHRPNKVTY------SAIMSAYCKKGKVEEAFGVFESMKDLG 330
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG------ 208
+ E VF LI G + D + M ++G+ PS Y +M G +KHG
Sbjct: 331 IDLDEYVFVILIDGFGRIGDFDKVFCLFDEMERSGISPSVVAYNAVMNGLSKHGRTSEAD 390
Query: 209 --------DMDSIKT---------KIPSL----KPQSELFLCFSFQLTNLLILVSSDMAS 247
D+ + T IP + + E + + N+LI M +
Sbjct: 391 ELLKNVAADVITYSTLLHGYMEEENIPGILQTKRRLEESGISMDVVMCNVLIRALFMMGA 450
Query: 248 AEGILTM---MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN--GDYLDI 302
E + + M + L P++ TY ++ GY K G ++ + + +L++ Y I
Sbjct: 451 FEDVYALYKGMPEMDLIPNSVTYCTMIDGYCKVGRIEEALEVFDEFRKTLISSLACYNSI 510
Query: 303 IHALAVSGHGE 313
I+ L +G E
Sbjct: 511 INGLCKNGMTE 521
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/275 (18%), Positives = 105/275 (38%), Gaps = 55/275 (20%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G+ PN VT + L+ C+ G + ++++M + + +++A G+ +
Sbjct: 190 GLRPNVVTC------TALVGALCKMGRVGEVCGLVQWMEREGLGLDVVLYSAWACGYVEE 243
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+ G + M + G+ +YT L+ G++K GD++ F+F
Sbjct: 244 RVLGEVFGRMREMVEKGIGHDFVSYTVLVDGFSKLGDVEK----------------SFTF 287
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
L M + G P+ TY+ +M Y K G ++ +
Sbjct: 288 -------------------LAKMIKEGHRPNKVTYSAIMSAYCKKGKVEEAFGVFESMKD 328
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
++ D + + + + G G I + + C + M ++G+ PS Y +
Sbjct: 329 LGIDLD--EYVFVILIDGFGR-IGDFDKVFCLFD---------EMERSGISPSVVAYNAV 376
Query: 353 MCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHA 387
M G +KHG LL + ++ Y ++H
Sbjct: 377 MNGLSKHGRTSEADELLKNVAADVIT--YSTLLHG 409
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 105/260 (40%), Gaps = 32/260 (12%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+ L+ G S+ D+ + L M + G P+ TY+ +M Y K G ++ S+K
Sbjct: 268 YTVLVDGFSKLGDVEKSFTFLAKMIKEGHRPNKVTYSAIMSAYCKKGKVEEAFGVFESMK 327
Query: 222 PQSELFLCFSFQLTNLLILVSS-----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
L +IL+ D + M ++G+ PS Y +M G +K
Sbjct: 328 D-----LGIDLDEYVFVILIDGFGRIGDFDKVFCLFDEMERSGISPSVVAYNAVMNGLSK 382
Query: 277 HGDMDSVRRLLAQSG------SSLVNGDYLDIIHALAVSGHGEYIDE----VSAIVCFVN 326
HG LL S+L++G Y++ + + ++E + ++C V
Sbjct: 383 HGRTSEADELLKNVAADVITYSTLLHG-YMEEENIPGILQTKRRLEESGISMDVVMCNVL 441
Query: 327 ICFHWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
I ++ G M + L P++ TY ++ GY K G ++ + + +L+
Sbjct: 442 IRALFMMGAFEDVYALYKGMPEMDLIPNSVTYCTMIDGYCKVGRIEEALEVFDEFRKTLI 501
Query: 378 N--GDYLDIIHALAVSGHGE 395
+ Y II+ L +G E
Sbjct: 502 SSLACYNSIINGLCKNGMTE 521
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 76/195 (38%), Gaps = 24/195 (12%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D A +E +G+ N V Y +I+ C +G + A ++L+ + SE +
Sbjct: 731 DLCAFVEKKGMNLNIVIYNSIING------LCHEGRLIEAFRLLDSIEKLNLVPSEITYA 784
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-------IKTK 216
+IY + + AE + + M G +P Q Y L+ G +K G ++ ++TK
Sbjct: 785 TVIYALCREGFLLDAEHVFSKMVLKGFQPKVQVYNSLLDGISKFGQLEKAFELLNDMETK 844
Query: 217 I--PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
P S + C+ + DM A + + P + L+ G
Sbjct: 845 YIEPDSLTISAVINCYCQK---------GDMHGALEFYYKFKRKDMSPDFFGFLYLIRGL 895
Query: 275 AKHGDMDSVRRLLAQ 289
G M+ R +L +
Sbjct: 896 CTKGRMEEARSVLRE 910
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 134/307 (43%), Gaps = 43/307 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 134 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 193
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 194 RLKSAMLASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLVKGLVPNGVTFTTLI 250
Query: 272 CGYAKHGDMDSV----RRLLAQS-GSSLVNGDYLDIIHALAVSGH----GEYIDEVSAIV 322
G+ K+G +D +R+L+QS L+ Y +I+ L G IDE
Sbjct: 251 DGHCKNGRVDLAMEIYKRMLSQSLLPDLIT--YNTLIYGLCKKGDLKQAHHLIDE----- 303
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNG 379
MS GL+P TYT L+ G K GD+D+ R+ + Q L +
Sbjct: 304 --------------MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDV 349
Query: 380 DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNT 436
Y +I L G ++++ ++ VG + + I KG + +++
Sbjct: 350 AYTALISGLCQEGRSVDAEKMLREMLS-VGLKPNXRTYTMIINEFCKKGDVWKGSKLLKE 408
Query: 437 LARSANI 443
+ R ++
Sbjct: 409 MQRDGHV 415
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 207 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF------TTLIDGHCKNGRVD 260
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 261 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 320
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE +L M GL+
Sbjct: 321 DGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 380
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P+ +TYT ++ + K GD+ +LL +
Sbjct: 381 PNXRTYTMIINEFCKKGDVWKGSKLLKE 408
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 112/280 (40%), Gaps = 53/280 (18%)
Query: 130 LISKYCQDGNIEGATKIL-----------------------------EFMRDKTFPISEG 160
L+ ++C+DG+I A + E R K+ ++ G
Sbjct: 144 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 203
Query: 161 V------FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
V ++ LI G + + M A + M GL P+ T+T L+ G+ K+G +D
Sbjct: 204 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 263
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+ QS L ++ + D+ A ++ MS GL+P TYT L+ G
Sbjct: 264 EIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGC 323
Query: 275 AKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
K GD+D+ R+ + Q L + Y +I L G +D +
Sbjct: 324 CKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRS--VDAEKML---------- 371
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M GL+P+ +TYT ++ + K GD+ +LL +
Sbjct: 372 ---REMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKE 408
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 130/328 (39%), Gaps = 32/328 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ L+R + + L ++ G EP+ + L+ C++G+++ A
Sbjct: 203 FIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVF------GCLLDALCKNGSVKEAAS 256
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E MR + P + F +L+YG + + A+ +L + +AG EP Y L+ GYA
Sbjct: 257 LFEDMRVRFNP-NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYA 315
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G M + +K + SF + + M A I T M +G E
Sbjct: 316 QAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVV 375
Query: 266 TYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TYT L+ G+ K G+ D +L Q G YL I+ A E ++E
Sbjct: 376 TYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMA---HEKKEELEE----- 427
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN---G 379
C +E M + G P Y ++ K GD+ RL + + +N
Sbjct: 428 -----CMELIEE--MRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLD 480
Query: 380 DYLDIIHALAVSG----HGEYIDEIISK 403
Y+ ++H G +Y E++ +
Sbjct: 481 TYILMVHGFLSQGCLVEACDYFKEMVER 508
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 121/324 (37%), Gaps = 37/324 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ H+ +LL + L +++ G EP+ V Y L+ Y Q G +
Sbjct: 268 NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGG------YAQAGKMR 321
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L M+ + F LI + M A I T M +G E TYT L+
Sbjct: 322 DAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLI 381
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS----SDMASAEGILTMMSQ 257
G+ K G+ D + + + QL+ L I+++ ++ ++ M +
Sbjct: 382 SGFCKWGNTDKAYEILDDMIQKGH----DPSQLSYLCIMMAHEKKEELEECMELIEEMRK 437
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN---GDYLDIIHALAVSGHGEY 314
G P Y ++ K GD+ RL + + +N Y+ ++H G
Sbjct: 438 IGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQG---- 493
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGL--EPSAQTYTKLMCGYAKHGDMDSIRRL---L 369
C V C ++ E M + GL P T +L + ++ + + +
Sbjct: 494 --------CLVEACDYFKE---MVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCM 542
Query: 370 AQNGSSLVNGDYLDIIHALAVSGH 393
G L + IHAL +GH
Sbjct: 543 TTKGCELNVSAWTIWIHALFSNGH 566
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 95/465 (20%), Positives = 176/465 (37%), Gaps = 61/465 (13%)
Query: 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS 177
R +Y+ + K + K Q G + I E ++ + ++ VF L+ + +
Sbjct: 161 RHSYEVYKAMIKTLGKMRQFGAVWAL--IEEMRKENPYMLTPEVFIVLMRRFASVRMVKK 218
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
A +L M + G EP + L+ K+G + + ++ + F+ L +
Sbjct: 219 AVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR------FNPNLRHF 272
Query: 238 LILV-----SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
L+ + A+ +L + +AG EP Y L+ GYA+ G M LLA+
Sbjct: 273 TSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKK 332
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
+ + E +DE I F ++G +G E TYT L
Sbjct: 333 VNCGPNAASFTILIQSFCKTEKMDEAMRI-------FTEMQG-----SGCEADVVTYTTL 380
Query: 353 MCGYAKHGDMDSIRRLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQP-GV 408
+ G+ K G+ D +L Q G YL I+ A E E+I +++ G
Sbjct: 381 ISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGC 440
Query: 409 GYSADAANHIYHLINK-GQIDAAYRIVNTLARSA---NINGEQLPVGGFLVRHMVKTNQP 464
+ N + L+ K G + A R+ + ++ L V GFL +
Sbjct: 441 VPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQ-------- 492
Query: 465 GVGYSADAANHIYHLINKGQIDAAY-----RIVNTLARSANI------------NGEQLP 507
G +A ++ ++ +G + A + N L R+ + G +L
Sbjct: 493 --GCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELN 550
Query: 508 VGGFLVR-HMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKA 551
V + + H + +N + + + C + D +L P+ A L++
Sbjct: 551 VSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRG 595
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ +Y + ++E +GI+P+ VTY LI +C++G +
Sbjct: 234 DLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHG------FCKEGRMR 287
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL- 200
A ++ + +RD T P + + LI G+ + ND+ A + M GL P+ TY +
Sbjct: 288 EAMRLFKEIRDAT-P-NHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSIL 345
Query: 201 --MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
+C + D + + ++ K + + C + L N + DM SA + M +A
Sbjct: 346 RKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNT--LINAYCKI-GDMKSALKVKNRMVEA 402
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
GL+ TY L+ G+ K +MD + LL
Sbjct: 403 GLKLDQFTYKALIHGFCKIREMDGAKELL 431
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 131/337 (38%), Gaps = 29/337 (8%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
+ V +I YN L+ + + L+++ES+ + P+ TY + LIS Y
Sbjct: 192 ARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTY------NTLISLY 245
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C+ G A + + M + +N+LI+G + M A + + A P+
Sbjct: 246 CKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDAT--PNH 303
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TYT L+ GY + D+D ++ Q ++ + + A +L
Sbjct: 304 VTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNE 363
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
MS+ +EP T L+ Y K GDM S V+ + ++G L Y +IH
Sbjct: 364 MSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIRE 423
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL--- 368
+ E+ M AG PS TY+ L+ GY + +++ +L
Sbjct: 424 MDGAKELLL---------------SMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDE 468
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
+ G + Y +I +Y +I S +Q
Sbjct: 469 FVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQ 505
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 12/205 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN++LR + L ++ + IEP+ VT + LI+ YC+ G+++ A K
Sbjct: 341 YNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVT------CNTLINAYCKIGDMKSALK 394
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M + + + + ALI+G + +M A+ +L M AG PS TY+ L+ GY
Sbjct: 395 VKNRMVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYC 454
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEP 262
+ +++ K+P + LC L LI + A+ I ++M + G
Sbjct: 455 NQQNEEAV-LKLPDEFVRKG--LCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLG 511
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLL 287
+ YT L Y K G ++ LL
Sbjct: 512 DSVIYTSLAYAYWKLGKANAASDLL 536
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 103/262 (39%), Gaps = 20/262 (7%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K+ G+E N Y LI C+ G++E A +L M K +N LI
Sbjct: 190 KMARIGVEANIHVYNVLIHAC------CKSGDVEKADNLLSEMESKCVFPDLFTYNTLIS 243
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
+ + A + M + G++P TY L+ G+ K G M ++ +
Sbjct: 244 LYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRDATPNH 303
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ ++ + L +D+ A + M GL P+ TY ++ + G + +LL
Sbjct: 304 VTYTTLIDGYCRL--NDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLL 361
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
+ + D ++ ++ + + D SA+ M +AGL+
Sbjct: 362 NEMSEKKIEPD--NVTCNTLINAYCKIGDMKSALKV----------KNRMVEAGLKLDQF 409
Query: 348 TYTKLMCGYAKHGDMDSIRRLL 369
TY L+ G+ K +MD + LL
Sbjct: 410 TYKALIHGFCKIREMDGAKELL 431
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 23/174 (13%)
Query: 55 SEPSLGPGNLPCEDPFSVHTG---------------ELDVPLDISHYNALLRVYLDNEHT 99
SE + P N+ C + + E + LD Y AL+ +
Sbjct: 365 SEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIHGFCKIREM 424
Query: 100 FSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL-EFMRDKTFPIS 158
+ L + G P+ TY S L+ YC N E K+ EF+R K +
Sbjct: 425 DGAKELLLSMLDAGFSPSYCTY------SWLVDGYCNQQNEEAVLKLPDEFVR-KGLCVD 477
Query: 159 EGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 212
+ ++ ALI + + A+ I ++M + G + YT L Y K G ++
Sbjct: 478 KSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANA 531
>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 605
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 152/377 (40%), Gaps = 69/377 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI----SNSK------------ 129
YN ++ YL + L ++ G+ N+VTY LI N K
Sbjct: 243 YNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMR 302
Query: 130 -------------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
LIS C+ GNI+ A + + + +K S + ALI G + +M
Sbjct: 303 ERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMG 362
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKP---QSELFLCFSF- 232
+AE ++ M G+ + + L+ GY + G +D ++ Q+++F C +
Sbjct: 363 AAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIA 422
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
N L A+ L M + G+ S +YT L+ Y K G+++ +RL + S
Sbjct: 423 SCFNRL----KRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 478
Query: 293 SLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY 349
V + Y +I+A G + E + W M G++P + TY
Sbjct: 479 KEVQPNAITYNVMIYAYCKQGK---VKEARKL---------WAN---MKANGMDPDSYTY 523
Query: 350 TKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGE----YIDEIIS 402
T L+ G ++D RL ++ G ++ + Y +I L+ +G + DEI
Sbjct: 524 TSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKR 583
Query: 403 KIQPGVGYSADAANHIY 419
K GY+ D N +Y
Sbjct: 584 K-----GYTID--NKVY 593
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 117/273 (42%), Gaps = 37/273 (13%)
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C+ G +E + K+++ K +N +I + + D + E IL +M + G+ +
Sbjct: 216 CRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNK 275
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKP---QSELFLCFSFQLTNLLILVSSDMASAEGI 251
TYT L+ K+G M+ ++ ++ +S++ + S N ++ A +
Sbjct: 276 VTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCR---KGNIKRAFLL 332
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
+++ GL PS+ TY L+ G K G+M + L+ + S VN ++ ++G+
Sbjct: 333 FDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVN--ITQVVFNTLINGY 390
Query: 312 GE--YIDEVSAI--------------VC-FVNICFH----------WLEGPMMSQAGLEP 344
IDE S I C + CF+ WL M + G+
Sbjct: 391 CRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWL--FRMMEGGVRL 448
Query: 345 SAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
S +YT L+ Y K G+++ +RL + S V
Sbjct: 449 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEV 481
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V L Y L+ VY + ++ S+ ++PN +TY +I YC+ G
Sbjct: 446 VRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNV------MIYAYCKQG 499
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A K+ M+ + +LI+G A+++ A + + M GL+ ++ TYT
Sbjct: 500 KVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 559
Query: 199 KLMCGYAKHGDMD 211
++ G +K G D
Sbjct: 560 VMISGLSKAGKSD 572
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 44/205 (21%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
+L ++ G+ + V+Y + LI YC++GN+E A ++ M K + +N
Sbjct: 437 WLFRMMEGGVRLSTVSY------TNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNV 490
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+IY + + + A + M G++P + TYT L+ HG+
Sbjct: 491 MIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLI-----HGE--------------- 530
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
++ ++ A + + M GL+ ++ TYT ++ G +K G D
Sbjct: 531 ---------------CIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 575
Query: 285 RL---LAQSGSSLVNGDYLDIIHAL 306
L + + G ++ N Y +I ++
Sbjct: 576 GLYDEIKRKGYTIDNKVYTALIGSM 600
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 34/275 (12%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+F +++E+ G P+ +T+ + L++ C+ GNI+ A +L+ MR + + +N
Sbjct: 355 EFWSEMEADGYAPDVITF------TILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYN 408
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIP 218
LI G + N + A + M G+ P+A TY + Y K G D K KI
Sbjct: 409 TLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIR 468
Query: 219 SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ P + L + + A+ I + GL P + TY +M Y+K G
Sbjct: 469 GIAPNIVACNASLYSLAEM-----GRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAG 523
Query: 279 DMDSVRRLLAQSGSSLVNGDYL---DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
+D LL+ + D + +I+ L +G +DE + C
Sbjct: 524 QVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGR---VDEAWKMFC------------ 568
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+ L P+ TY L+ G K G + L A
Sbjct: 569 RLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFA 603
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 128/319 (40%), Gaps = 34/319 (10%)
Query: 150 MRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 209
MR+ F ++ +N LI+ Q+ A + M GL+PS +T++ LM K D
Sbjct: 185 MREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRD 244
Query: 210 MDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTK 269
+++K+ + ++ +++ + ++ + + A I+ M G P TYT
Sbjct: 245 TETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTV 304
Query: 270 LMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSA-- 320
L+ G +D L + +S D Y+ ++ + G E+ E+ A
Sbjct: 305 LIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADG 364
Query: 321 ----IVCF------------VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
++ F ++ FH L+ +M + G+ P+ TY L+ G + +D
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLD--VMRKQGVLPNLHTYNTLISGLLRVNRLDD 422
Query: 365 IRRLLAQNGSSL----VNGDYLDIIHALAVSGHGEYIDEIISKIQ-PGVGYSADAAN-HI 418
L N +L Y+ I SG + E K++ G+ + A N +
Sbjct: 423 ALDLF-NNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASL 481
Query: 419 YHLINKGQIDAAYRIVNTL 437
Y L G++ A I N L
Sbjct: 482 YSLAEMGRLREAKVIFNRL 500
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 131/335 (39%), Gaps = 51/335 (15%)
Query: 64 LPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQ 123
L + F T EL V + YN L+ +L + + ++++ G P+ TY
Sbjct: 771 LVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNL 830
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
L+ + + G I ++ E M + + N +I ++N + A +
Sbjct: 831 LLD------AHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFY 884
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLL 238
+ P+ TY L+ G K G ++ K + +P + ++ N+L
Sbjct: 885 DLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIY--------NIL 936
Query: 239 IL---VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV 295
I + D+ +A + M + G+ P ++YT L+ + G +D + +
Sbjct: 937 INGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQT-- 994
Query: 296 NGDYLD-IIHALAVSGHGE---------YIDEVSA------IVCFVNICFHWLEGPMMSQ 339
G YLD I + L + G G DE+ + + + ++ + M+ Q
Sbjct: 995 -GLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQ 1053
Query: 340 AG----------LEPSAQTYTKLMCGYAKHGDMDS 364
AG LEP+ TY L+ GY+ G+ DS
Sbjct: 1054 AGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDS 1088
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 80/208 (38%), Gaps = 8/208 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+ L D +E+ G+ P TY I Y + G +
Sbjct: 403 NLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYIL------FIDFYGKSGRSD 456
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + E M+ + + NA +Y ++ + A+ I + GL P + TY +M
Sbjct: 457 KALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMM 516
Query: 202 CGYAKHGDMDSIKTKIPSL-KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
Y+K G +D + + + Q E + L N L + + A + + L
Sbjct: 517 KCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTL-YKAGRVDEAWKMFCRLKDMKL 575
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
P+ TY L+ G K G + L A
Sbjct: 576 APTVVTYNTLIAGLGKEGQVQRAMELFA 603
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 62/312 (19%), Positives = 119/312 (38%), Gaps = 31/312 (9%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ ++AL+ T + L ++ES G++PN TY + I + G I+
Sbjct: 229 LKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTY------TICIRVLGRAGRIDE 282
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A +I++ M D + LI A + A + M + +P TY ++
Sbjct: 283 ACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLD 342
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
++ GD+ +K ++ +F + + + ++ A +L +M + G+ P
Sbjct: 343 KFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLP 402
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV- 318
+ TY L+ G + +D L + G Y+ I SG + E
Sbjct: 403 NLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETF 462
Query: 319 ----------SAIVCFVNICFHWLEGPMMSQA----------GLEPSAQTYTKLMCGYAK 358
+ + C ++ + E + +A GL P + TY +M Y+K
Sbjct: 463 EKMKIRGIAPNIVACNASL-YSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSK 521
Query: 359 HGDMDSIRRLLA 370
G +D LL+
Sbjct: 522 AGQVDEAIELLS 533
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 118/300 (39%), Gaps = 39/300 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN +++ Y + L+ + EP+ +I + LI+ + G ++
Sbjct: 508 DSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPD------IIVINSLINTLYKAGRVD 561
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ ++D + +N LI G + + A + M+ G P+ T+ ++
Sbjct: 562 EAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTIL 621
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
K+ ++D + + + + +F +++ ++ A + M + L
Sbjct: 622 DCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LT 680
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P T L+ G K+G M+ ++ D +H L V Y+D
Sbjct: 681 PDCVTLCTLLPGVVKNGLMEDAFKIAE------------DFVHRLGV-----YVDRR--- 720
Query: 322 VCFVNICFHW--LEGPMMSQAGLEPSAQTYTKLMCG-YAKHGD-MDSIRRLLAQNGSSLV 377
W L G +++QAG E + +L+CG K G + I ++L ++ +LV
Sbjct: 721 --------FWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALV 772
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+++S+GI P+ TY LI N + G +E A K+ E ++ + +NALI
Sbjct: 1025 EMQSRGINPDLFTYNSLILNLGVA------GMVEQAGKLYEELQFIGLEPNVFTYNALIR 1078
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
G+S + + SA + M G P+ T+ +L
Sbjct: 1079 GYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN V + + LI +C++G ++
Sbjct: 211 DVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXF------TTLIDGHCKNGRVD 264
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLI 324
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D + ++ + + AE +L M GL+
Sbjct: 325 DGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLK 384
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P A+TYT ++ + K GD+ +LL +
Sbjct: 385 PDARTYTMIINEFCKKGDVWKGSKLLKE 412
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 129/306 (42%), Gaps = 41/306 (13%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q ++ +++ + S A + M GL P+ +T L+
Sbjct: 198 RLKSAMLASGVQPDV---YTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLI 254
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G IDE
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDE------- 307
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS----IRRLLAQNGSSLVNGD 380
MS GL+P TYT L+ G K GD+D +R++ +N L
Sbjct: 308 ------------MSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQEN-XRLDXVX 354
Query: 381 YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
Y +I L G ++++ ++ VG DA + I KG + +++ +
Sbjct: 355 YTALISGLCXEGRSVDAEKMLREMLS-VGLKPDARTYTMIINEFCKKGDVWKGSKLLKEM 413
Query: 438 ARSANI 443
R ++
Sbjct: 414 QRDGHV 419
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 164/391 (41%), Gaps = 54/391 (13%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L++ D + ++ +G +PN TY + LI C+DG IE A
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTY------TVLIDGLCRDGKIEEANG 357
Query: 146 ILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
+ M +D+ FP S +NALI G+ + + A +LT+M + +P+ +T+ +LM G
Sbjct: 358 VCRKMVKDRIFP-SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLE 261
+ G + LK + L N+LI M +A +L+ M+ +E
Sbjct: 417 CRVG---KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE 473
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSSLVNG--------DYLDI 302
P T+T ++ + K G D L +G++L++G D L I
Sbjct: 474 PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFI 533
Query: 303 IHALA-----VSGHG-EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY 356
+ L + H I ++ + C V L +++ GL PS TYT L+ G
Sbjct: 534 LETLVKMRILTTPHSLNVILDMLSKGCKVKEELAML--GKINKLGLVPSVVTYTTLVDGL 591
Query: 357 AKHGDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSAD 413
+ GD+ I L+ +G Y II+ L G E ++++S +Q S
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQD----SGV 647
Query: 414 AANHIYH------LINKGQIDAAYRIVNTLA 438
+ NH+ + +N G++D A V +
Sbjct: 648 SPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 103/503 (20%), Positives = 193/503 (38%), Gaps = 51/503 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y ++ N +T + F++K+ G I S L+ +C+ N+ A K
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGF-----VLDSHIGTSLLLG-FCRGLNLRDALK 251
Query: 146 ILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
+ + M ++ T + ++ LI+G + + A G+ M + G +PS +TYT L+
Sbjct: 252 VFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKAL 311
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
G +D + P+ ++ + + + A G+ M + + PS
Sbjct: 312 CDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSV 371
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF 324
TY L+ GY K G + LL ++ A + +E+ +C
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLT-------------VMEKRACKPNVRTFNELMEGLCR 418
Query: 325 VNICF---HWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDY 381
V + H L+ M GL P +Y L+ G + G M++ +LL+ + D
Sbjct: 419 VGKPYKAVHLLK--RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Query: 382 LD---IIHALAVSGHGEYIDEIIS-KIQPGVGYSADAANHIYHLINK-GQIDAAYRIVNT 436
L II+A G + + ++ G+ + + K G+ A I+ T
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536
Query: 437 LAR--------SANINGEQLPVGGFLVRHMV---KTNQPGVGYSADAANHIYH-LINKGQ 484
L + S N+ + L G + + K N+ G+ S + LI G
Sbjct: 537 LVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 485 IDAAYRIVNTLARSA---NINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPR 541
I ++RI+ + S N+ + + G V + +K+L+ + D + P
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRV---EEAEKLLSA---MQDSGVSPN 650
Query: 542 AFNLAVLIKAHVLKEDYTGAVET 564
V++K +V A+ET
Sbjct: 651 HVTYTVMVKGYVNNGKLDRALET 673
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 102/269 (37%), Gaps = 44/269 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN L+ H + L+ + IEP+ +T+ + +I+ +C+ G +
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF------TAIINAFCKQGKAD 493
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASA-------------------EGIL 182
A+ L M K + E LI G + A IL
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVIL 553
Query: 183 TMMSQA----------------GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL 226
M+S+ GL PS TYT L+ G + GD+ + +K L
Sbjct: 554 DMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCL 613
Query: 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SV 283
+ + + + + AE +L+ M +G+ P+ TYT ++ GY +G +D
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
R + + G L + Y ++ +S G
Sbjct: 674 VRAMVERGYELNDRIYSSLLQGFVLSQKG 702
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 6/215 (2%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
+ V D+ YN LL + +++ G++P+++TY + LI YC+
Sbjct: 357 MGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITY------TTLIDGYCK 410
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+G++E A +I + M ++ + F ALI G + + AE L M +AG++P T
Sbjct: 411 EGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDAT 470
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
YT ++ GY K G++ + ++ ++ + + M +A +L M
Sbjct: 471 YTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAML 530
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
G+ P TY L+ G+ K+G + + +L + G
Sbjct: 531 NLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKG 565
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 106/263 (40%), Gaps = 54/263 (20%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+ +E NR+ Y + + S LI C++G ++ A ++ + M+ + + F ALI G +
Sbjct: 282 KTMEENRI-YPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
+ M SA M G++P Y L+ G K GD++
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVN-------------------- 380
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLA 288
A ++ M G++P TYT L+ GY K GD++S +R+ +
Sbjct: 381 ---------------KARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 425
Query: 289 QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
+ G L N + +I G + M +AG++P T
Sbjct: 426 EEGVVLDNVAFTALISGFCRDGRVRDAERTLR---------------EMVEAGMKPDDAT 470
Query: 349 YTKLMCGYAKHGDMDSIRRLLAQ 371
YT ++ GY K G++ +LL +
Sbjct: 471 YTMVIDGYCKKGNVKMGFKLLKE 493
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 112/275 (40%), Gaps = 36/275 (13%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+++ +G+ PN +T+ LI + ++ A M ++N L+
Sbjct: 318 EMQQRGLRPNGITFTALIDGQY------RSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLN 371
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G + D+ A ++ M G++P TYT L+ GY K GD++S + + +
Sbjct: 372 GLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVL 431
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+F + AE L M +AG++P TYT ++ GY K G++ +LL
Sbjct: 432 DNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLL 491
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM---------MS 338
+ + ++GH + ++ V +C +G M M
Sbjct: 492 KE----------------MQINGHKPGV--ITYNVLMNGLC---KQGQMKNANMLLEAML 530
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
G+ P TY L+ G+ K+G + + +L + G
Sbjct: 531 NLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKG 565
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 126/313 (40%), Gaps = 33/313 (10%)
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
++ILE+ FP +N LI + + A+ I + + GL P+ ++ L+ G
Sbjct: 212 SEILEY----GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
K ++D +++ F++ + + + AE + M Q GL P+
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSA 320
T+T L+ G + MDS Q + V D Y +++ L G +++
Sbjct: 328 GITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD---VNKARK 384
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLV 377
+V M G++P TYT L+ GY K GD++S IR+ + + G L
Sbjct: 385 LV------------DEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIV 434
N + +I G + + ++ G D A + I KG + ++++
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEA-GMKPDDATYTMVIDGYCKKGNVKMGFKLL 491
Query: 435 NTLARSANINGEQ 447
+ ING +
Sbjct: 492 ----KEMQINGHK 500
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 142/357 (39%), Gaps = 43/357 (12%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V D+ Y L+R D + + L ++ G++PN V Y S L+ YC+ G
Sbjct: 154 VRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVY------SCLLRGYCRSG 207
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ K+ E M + +F LI + A + MM Q GLEP+ TY
Sbjct: 208 RWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYN 267
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS---DMASAEGILTMM 255
L+ K G S++ + K + + N LI S +M A L M
Sbjct: 268 VLINSLCKEG---SVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEM 324
Query: 256 SQAG--LEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSG--SSLVNGDYL--DIIHAL 306
Q +EP T+ ++ G K G M VR ++A+ G +LV +YL +
Sbjct: 325 IQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVH 384
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V +DE++ +GLEP + TY+ L+ G++K ++D
Sbjct: 385 KVKMAMNLMDELAI-------------------SGLEPDSFTYSILINGFSKMWEVDRAE 425
Query: 367 RLLA---QNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH 420
+ L Q G Y+ ++ A+ G E + +++ G A A + + H
Sbjct: 426 KFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIAYSTMIH 482
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 127/292 (43%), Gaps = 38/292 (13%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+EPN VTY LI++ C++G++ A + + M DK +N LI G S
Sbjct: 257 RGLEPNVVTYNVLINS------LCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSG 310
Query: 172 ANDMASAEGILTMMSQAG--LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC 229
+M A L M Q +EP T+ ++ G K G M T+ ++ C
Sbjct: 311 VLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRM----TQAVKVREMMAERGC 366
Query: 230 FSFQLT-NLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
+T N LI L + A ++ ++ +GLEP + TY+ L+ G++K ++D +
Sbjct: 367 MCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEK 426
Query: 286 LLA---QSGSSLVNGDYLDIIHALAVSGHGEY-------IDE---VSAIVCFVNICFHWL 332
L Q G Y+ ++ A+ G E +D+ + AI I
Sbjct: 427 FLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCGLDAIAYSTMIHGACK 486
Query: 333 EGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
G M M GL P A TY+ L+ YAK GD++ R+L Q +S
Sbjct: 487 SGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTAS 538
>gi|449469755|ref|XP_004152584.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Cucumis sativus]
Length = 708
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 125/311 (40%), Gaps = 34/311 (10%)
Query: 88 ALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL 147
AL++ + D ++E +G+ N + Y + ++ + + IE A +
Sbjct: 334 ALIKSFCDEGLKSQALILQLEMEKKGVASNVIMY------NTIMDAFSKSNQIEEAEGVF 387
Query: 148 EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 207
M+ K + FN L+ +S+ E +L M GLEP+ ++YT L+ Y +
Sbjct: 388 AEMKSKGVKPTSASFNILMNAYSRRMQPEIVEKLLVEMKDMGLEPNVKSYTCLISAYGRQ 447
Query: 208 GDMDS------IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
M ++ K ++P S + + VS A M + GL+
Sbjct: 448 KKMSDMAADAFLRMKKNGIRPTSHSYTALIHAYS-----VSGWHEKAYSAFENMLREGLK 502
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVSA 320
PS +TYT L+ + + GD S+ ++ V G + L + HG Y++
Sbjct: 503 PSIETYTTLLDAFRRAGDTVSLMKIWKLMIREKVLGTRVTFNTLLDGFAKHGHYVEARDV 562
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD 380
I F I GL+P+ TY LM YA+ G + +LL + + + D
Sbjct: 563 ISEFDKI-------------GLQPTVMTYNMLMNAYARGGQHLKLPQLLQEMAARDLKPD 609
Query: 381 ---YLDIIHAL 388
Y +I+A
Sbjct: 610 SVTYSTMIYAF 620
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 153/359 (42%), Gaps = 28/359 (7%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L +P ++ N LL + FL K+ G EP+ VT+ L++ +C+
Sbjct: 110 LGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNG------FCR 163
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
I A + + M + + + ++N +I G ++ + +A +L M G+ P A T
Sbjct: 164 GDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVT 223
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL-CFSFQLTNLLILVSSDMASAEGILTMM 255
Y L+ G G D T++ S + E++ F+F + ++ AE + M
Sbjct: 224 YNSLISGLCNSGRWDD-ATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEM 282
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAVSGHGEY 314
+ L+P TY+ L+ G + +D ++ G + G + D++ +++ ++G+ +
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMF---GFMVSKGCFPDVVTYSILINGYCKS 339
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM---DSIRRLLAQ 371
+ F MSQ G+ + TYT L+ GY + G + + I + +
Sbjct: 340 KKVEHGMKLFCE----------MSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVF 389
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAA 430
G Y ++H L +G E I++ +Q G AD Y++I +G A
Sbjct: 390 CGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKS-GMDADIVT--YNIIIRGMCKAG 445
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 128/318 (40%), Gaps = 40/318 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ ++ + D L ++E GI P+ VTY LIS C G + AT+
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISG------LCNSGRWDDATR 242
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
++ M + FNALI + ++ AE + M + L+P TY+ L+ G
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL----VSSDMASAEGILTMMSQAGLE 261
+ +D + + + CF +T +++ S + + MSQ G+
Sbjct: 303 MYSRLDEAEQMFGFMVSKG----CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 262 PSAQTYTKLMCGYAKHGDM---DSVRRLLAQSGSSLVNGDYLDIIHALAVSGH------- 311
+ TYT L+ GY + G + + + + + G Y ++H L +G
Sbjct: 359 RNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 312 -------GEYIDEVSAIVCFVNICF------HWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
G D V+ + +C W ++ GL P TYT +M G K
Sbjct: 419 LADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYK 478
Query: 359 ---HGDMDSIRRLLAQNG 373
G+ D++ R + ++G
Sbjct: 479 KGLRGEADALFRKMKEDG 496
>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
Length = 554
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 126/302 (41%), Gaps = 22/302 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E+ P ++ +Y A + + L ++ +G++PN + +++ LI C
Sbjct: 236 EMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPN------VYTHTTLIDGLC 289
Query: 136 QDGNIEGATKI-LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G E A ++ L+ ++ ++ + + +I G+ + +A AE +L M + GL+P+
Sbjct: 290 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 349
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TYT L+ G+ K G D + +K + L +++ + A +L M
Sbjct: 350 NTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRM 409
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
+ GL+ TYT L+ + K G + L + + D ++
Sbjct: 410 ATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQ 469
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQ 371
++E F + C GL P+ QTYT ++ GY K G R+ + Q
Sbjct: 470 MEESQK---FFDKCL---------MIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQ 517
Query: 372 NG 373
NG
Sbjct: 518 NG 519
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 15/202 (7%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ QG++PN TY + LI +C+ G+ + A +++ M+ + F + +NA
Sbjct: 336 LLVRMVEQGLKPNTNTY------TTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNA 389
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+I G + + A +L M + GL+ TYT L+ + K G I +
Sbjct: 390 VIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGH---ITYALDLFDRMV 446
Query: 225 ELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
E C + LI M ++ GL P+ QTYT ++ GY K G
Sbjct: 447 ENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRST 506
Query: 282 SVRRLLAQSGSSLVNGDYLDII 303
R+ + + NG + D I
Sbjct: 507 MALRVFER---MVQNGCFADSI 525
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 97/256 (37%), Gaps = 30/256 (11%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
G LP + +PL + N +LRV L+ + G+ P+ ++
Sbjct: 117 GRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSF 176
Query: 122 QQLI-----------------------------SNSKLISKYCQDGNIEGATKILEFMRD 152
+ L+ + + ++ C+ G + ++ M +
Sbjct: 177 RALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLE 236
Query: 153 KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD- 211
P + + A I G + + A +L M GL+P+ T+T L+ G K G +
Sbjct: 237 MGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTER 296
Query: 212 SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+ + + +K S ++ + +A AE +L M + GL+P+ TYT L+
Sbjct: 297 AFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLI 356
Query: 272 CGYAKHGDMDSVRRLL 287
G+ K G D L+
Sbjct: 357 GGHCKGGSFDRAFELM 372
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 135/307 (43%), Gaps = 43/307 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 198 RLKSAMLASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLVKGLIPNGVTFTTLI 254
Query: 272 CGYAKHGDMDSV----RRLLAQS-GSSLVNGDYLDIIHALAVSGHGE----YIDEVSAIV 322
G+ K+G +D + +L+QS L+ Y +I+ L G + IDE
Sbjct: 255 XGHCKNGRVDLAMEIYKXMLSQSLLPDLIT--YNTLIYGLCKKGDLKQAHXLIDE----- 307
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNG 379
MS GL+P TYT L+ G K GD+D+ R+ + Q L +
Sbjct: 308 --------------MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDV 353
Query: 380 DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNT 436
Y +I L G ++++ ++ VG D + I KG + +++
Sbjct: 354 AYTALISGLCQEGRSVDAEKMLREMLS-VGLKPDIGTYTMIINEFCKKGDVWKGSKLLKE 412
Query: 437 LARSANI 443
+ R+ ++
Sbjct: 413 MQRNGHV 419
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 211 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF------TTLIXGHCKNGRVD 264
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 265 LAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLI 324
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS--AEGILTMMSQA 258
G K GD+D+ K + ++ L T L+ + + S AE +L M
Sbjct: 325 DGCCKEGDLDTAFKHRKRMIQGNIRL---DDVAYTALISGLCQEGRSVDAEKMLREMLSV 381
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
GL+P TYT ++ + K GD+ +LL +
Sbjct: 382 GLKPDIGTYTMIINEFCKKGDVWKGSKLLKE 412
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 110/280 (39%), Gaps = 53/280 (18%)
Query: 130 LISKYCQDGNIEGATKIL-----------------------------EFMRDKTFPISEG 160
L+ ++C+DG+I A + E R K+ ++ G
Sbjct: 148 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASG 207
Query: 161 V------FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
V ++ LI G + + M A + M GL P+ T+T L+ G+ K+G +D
Sbjct: 208 VQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAM 267
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+ QS L ++ + D+ A ++ MS GL+P TYT L+ G
Sbjct: 268 EIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGC 327
Query: 275 AKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
K GD+D+ R+ + Q L + Y +I L G +D +
Sbjct: 328 CKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRS--VDAEKML---------- 375
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M GL+P TYT ++ + K GD+ +LL +
Sbjct: 376 ---REMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKE 412
>gi|357116849|ref|XP_003560189.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Brachypodium distachyon]
Length = 737
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 139/325 (42%), Gaps = 48/325 (14%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD+S +L++++ D +++E +GI N Y ++++ YC+ I
Sbjct: 354 LDVS--ASLIKMFCDEGLKKEALIIQSEMERRGIPSNTSIYNEIVN------AYCKCSQI 405
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A + M++K + +N L+ +S+ E +L M GL+P+A++Y L
Sbjct: 406 EEAEGLFVEMKEKGLKPTIVTYNILMDAYSRRLQPEVVESLLLEMHDLGLQPNARSYNCL 465
Query: 201 MCGYAKHGDMDS------IKTKIPSLKPQSELFLCFSFQLTNLLIL--VSSDMASAEGIL 252
+ Y + M ++ K +KP S + T+LL V+ A
Sbjct: 466 ISAYGRQKKMSEKAEDAFLRMKADGIKPTSSSY-------TSLLCAYAVNGQYEKAHITY 518
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN---GDYLDIIHAL--A 307
M + L+PS +TYT L+ + + GD D L ++ S++N G H +
Sbjct: 519 VDMKKERLKPSLETYTALLDIFRRAGDTDK----LMETWRSMINEKVGGTRVTFHMVLDG 574
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
++ +G Y+ I F NI GL P+ TY LM YAK G + +
Sbjct: 575 LAKYGLYVQARDVIYEFGNI-------------GLPPTTMTYNILMNTYAKGGQHYKLPQ 621
Query: 368 LLAQNGSSLVNGD---YLDIIHALA 389
LL + + + D Y +I+A A
Sbjct: 622 LLKEMSALELKPDSVTYSTMIYAYA 646
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 117/280 (41%), Gaps = 66/280 (23%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+F ++ +G++ L ++ LI +C +G + A I M + P + ++N
Sbjct: 340 EFFQRMNRKGVK------WSLDVSASLIKMFCDEGLKKEALIIQSEMERRGIPSNTSIYN 393
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
++ + + + + AEG+ M + GL+P+ TY LM Y++ L+P+
Sbjct: 394 EIVNAYCKCSQIEEAEGLFVEMKEKGLKPTIVTYNILMDAYSRR------------LQPE 441
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM--- 280
E +L M GL+P+A++Y L+ Y + M
Sbjct: 442 -----------------------VVESLLLEMHDLGLQPNARSYNCLISAYGRQKKMSEK 478
Query: 281 --DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
D+ R+ A G + Y ++ A AV+G E A + +V+ M
Sbjct: 479 AEDAFLRMKA-DGIKPTSSSYTSLLCAYAVNGQYE-----KAHITYVD----------MK 522
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
+ L+PS +TYT L+ + + GD D L + S++N
Sbjct: 523 KERLKPSLETYTALLDIFRRAGDTDK----LMETWRSMIN 558
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 118/311 (37%), Gaps = 54/311 (17%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P + S YN ++ Y +++ +G++P VTY + L+ Y +
Sbjct: 385 IPSNTSIYNEIVNAYCKCSQIEEAEGLFVEMKEKGLKPTIVTY------NILMDAYSRRL 438
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA-SAEGILTMMSQAGLEPSAQTY 197
E +L M D + +N LI + + M+ AE M G++P++ +Y
Sbjct: 439 QPEVVESLLLEMHDLGLQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKADGIKPTSSSY 498
Query: 198 TKLMCGYAKHGDMDS-----IKTKIPSLKPQSELF--LCFSFQL---TNLLILVSSDM-- 245
T L+C YA +G + + K LKP E + L F+ T+ L+ M
Sbjct: 499 TSLLCAYAVNGQYEKAHITYVDMKKERLKPSLETYTALLDIFRRAGDTDKLMETWRSMIN 558
Query: 246 -----------------------ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
A ++ GL P+ TY LM YAK G
Sbjct: 559 EKVGGTRVTFHMVLDGLAKYGLYVQARDVIYEFGNIGLPPTTMTYNILMNTYAKGGQHYK 618
Query: 283 VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
+ +LL + + + D + ++ + + D A +H M ++G
Sbjct: 619 LPQLLKEMSALELKPD--SVTYSTMIYAYARVRDFSKAFY------YH----KQMVRSGQ 666
Query: 343 EPSAQTYTKLM 353
P A++Y KL+
Sbjct: 667 VPDAKSYKKLL 677
>gi|332030085|gb|EGI69910.1| Leucine-rich PPR motif-containing protein, mitochondrial
[Acromyrmex echinatior]
Length = 999
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 11/147 (7%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D + + +YN LL V +N + +P FLA + +EP+ TY+ L++ + +
Sbjct: 148 DGAITLEYYNTLLGVNEENSLSVNPKKFLADM---SVEPDENTYRLLLNTA------IKT 198
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
N E IL +DK+ I E N LI + N++A E ++T + +A L PS + Y
Sbjct: 199 NNSEHLWDILSVTKDKSVTIYEEAVNVLIQTYMTENNIAKVEQMITQIREAKL-PSTKAY 257
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQS 224
T+L CGYA+ GD+ ++ KI + +PQ+
Sbjct: 258 TELACGYARIGDIPNL-IKILNEEPQN 283
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISK 403
PS + YT+L CGYA+ GD+ ++ ++L + + + + L II L++S + +I I++
Sbjct: 252 PSTKAYTELACGYARIGDIPNLIKILNEEPQN--SANLLRIIKILSISNNSRHIPVILNF 309
Query: 404 IQPGV-GYSADAANHIYHLINKGQIDAAYRIVNTLA 438
+ V + + I LI Q+ A+ I+N +A
Sbjct: 310 LMTSVPALRTEISKTIIELIRANQVADAHTIINCIA 345
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---L 240
++ +EP TY L+ K + + + + K +S + + N+LI +
Sbjct: 175 FLADMSVEPDENTYRLLLNTAIKTNNSEHLWDILSVTKDKS---VTIYEEAVNVLIQTYM 231
Query: 241 VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL 300
+++A E ++T + +A L PS + YT+L CGYA+ GD+ ++ ++L + + + + L
Sbjct: 232 TENNIAKVEQMITQIREAKL-PSTKAYTELACGYARIGDIPNLIKILNEEPQN--SANLL 288
Query: 301 DIIHALAVSGHGEYI 315
II L++S + +I
Sbjct: 289 RIIKILSISNNSRHI 303
>gi|297836334|ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331889|gb|EFH62308.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 755
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 129/308 (41%), Gaps = 27/308 (8%)
Query: 109 LESQGIEPNRVTYQQLISNSK---------LISKYCQDGNIEGATKILEFMRDKTFPISE 159
L + G+E R + ++S + I KYC DG + ++L M+D
Sbjct: 314 LRAHGLELAREFVEHMLSRGRHLNAALLSLFIRKYCSDGYFDKGWELLMGMKDYGIRPDI 373
Query: 160 GVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS 219
F I +A + A +L + G+ + + + ++ G+ K G + I S
Sbjct: 374 VAFTVFIDKLCKAGFLREATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHS 433
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
+ + +F+ SF L+N I + DM A I + + GL P YT ++ GY G
Sbjct: 434 FRLRPNIFVYSSF-LSN--ICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGR 490
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
D + G+ L +G+ +I + G +S I M
Sbjct: 491 TDKAFQFF---GALLKSGNPPSLITYTLLIGACSKFGSISDAESVFRI---------MKT 538
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEY 396
GL P TY LM GY K ++ + L+ + S+ ++ D Y +IH++ V G+ +
Sbjct: 539 EGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDE 598
Query: 397 IDEIISKI 404
+EIIS++
Sbjct: 599 ANEIISEL 606
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 97/249 (38%), Gaps = 24/249 (9%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+ +I YC G + A + + P S + LI S+ ++ AE + +M
Sbjct: 479 TTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGACSKFGSISDAESVFRIMKT 538
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSD 244
GL P TY LM GY K ++ + I ++ + N+LI +V
Sbjct: 539 EGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAG---ISPDVATYNILIHSMVVRGY 595
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD--- 301
+ A I++ + + G PSA +T ++ G +K GD L V D +
Sbjct: 596 VDEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSA 655
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
++H + E AIV F + AGL+P Y L+ GY GD
Sbjct: 656 LLHGYCRAQRME-----KAIVLF----------DKLLDAGLKPDVVLYNTLIHGYCSVGD 700
Query: 362 MDSIRRLLA 370
++ L+
Sbjct: 701 IEKACELIG 709
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P DI YN L+ Y S T+ + ++ SQG+ P+ +TY L++ C+ G
Sbjct: 432 PPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNG------LCKAGK 485
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
E +I + M +K + +N ++ +A + A +L M GL+P ++
Sbjct: 486 SEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGT 545
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD---MASAEGILTMMS 256
L G+ K GD+D ++ Q + +C + N+++ S+ M A + ++M
Sbjct: 546 LFTGFCKIGDIDGAYQLFRRMEKQYD--VCHTTATYNIIVSAFSEQLNMNMAMKLFSVMK 603
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
+G +P TY ++ G+ K G++ + L ++
Sbjct: 604 NSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLEN 637
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 130/327 (39%), Gaps = 49/327 (14%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P D++ YN+++ Y L +G +P+ TY LI+ +C+DG+
Sbjct: 293 PDDLT-YNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTY------CSLINGFCKDGD 345
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A + + K S ++N LI G SQ + A ++ M++ G P+ TY
Sbjct: 346 PDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNL 405
Query: 200 LMCGYAKHGDM--------DSI-KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
++ G K G + D+I K P + + L + QL + SA
Sbjct: 406 VINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLK---------LDSATE 456
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALA 307
++ M G+ P TY L+ G K G + V + + + G + Y I+ +L
Sbjct: 457 MVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLC 516
Query: 308 VSGH-GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 364
+ E +D L G M S+ GL+P ++ L G+ K GD+D
Sbjct: 517 KAKKVNEAVD---------------LLGEMKSK-GLKPDVVSFGTLFTGFCKIGDIDGAY 560
Query: 365 --IRRLLAQNGSSLVNGDYLDIIHALA 389
RR+ Q Y I+ A +
Sbjct: 561 QLFRRMEKQYDVCHTTATYNIIVSAFS 587
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 119/338 (35%), Gaps = 69/338 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQ---QLISNSKLISKYCQDG 138
D+ +N L+ V F L K+ +G+ PN T+ Q + + + ++
Sbjct: 215 DVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNS 274
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A + L M + F + +N++I G+ + + A +L G +P TY
Sbjct: 275 RVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYC 334
Query: 199 KLMCGYAKHGDMDSIKTKIPS-----LKPQSELFLCFSFQLTNLLILVSSDMA---SAEG 250
L+ G+ K GD D L+P S L N LI S A
Sbjct: 335 SLINGFCKDGDPDRAMAVFKDGLGKGLRP--------SIVLYNTLIKGLSQQGLILPALQ 386
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
++ M++ G P+ TY ++ G K G VS
Sbjct: 387 LMNEMAENGCLPNIWTYNLVINGLCKMG----------------------------CVSD 418
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+D+ A G P TY L+ GY K +DS ++
Sbjct: 419 ASHLVDDAIA-------------------KGCPPDIFTYNTLIDGYCKQLKLDSATEMVN 459
Query: 371 QNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQ 405
+ S + D Y +++ L +G E + EI ++
Sbjct: 460 RMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAME 497
>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 947
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 131/324 (40%), Gaps = 59/324 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N ++ + E + +++ G EP+ VTY+ LI YC+ GN+E A K
Sbjct: 502 FNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDG------YCKLGNVEEAFK 555
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M + S ++N+LI G ++ +L+ M GL P+ TY L+ G+
Sbjct: 556 VKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWC 615
Query: 206 KHGDMDSIKTK-------------IPSLKPQSELFLCFSFQLTNLLI--LVSSDMASAEG 250
G +D T I K S L+ N+L+ +V+ D+ G
Sbjct: 616 DEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHG 675
Query: 251 ILTMMSQA---GLE-----------------PSAQTYTKLMCGYAKHGDMDSVRRLLAQ- 289
+ +A L+ P++ Y + G K G +D +++ +
Sbjct: 676 YFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSL 735
Query: 290 --SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
G S N Y +IH + +G+ VN F L M+ + GL P+
Sbjct: 736 LLRGFSPDNFTYCTLIHGYSAAGN-------------VNDAFS-LRDEMLKR-GLAPNII 780
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TY L+ G K G++D ++L +
Sbjct: 781 TYNALINGLCKSGNLDRAQKLFDK 804
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 12/216 (5%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
LDV LD +++ L + N + D L + PN V Y I+ C+
Sbjct: 668 LDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAG------LCK 721
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G ++ A KI + + F + LI+G+S A ++ A + M + GL P+ T
Sbjct: 722 SGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIIT 781
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILT 253
Y L+ G K G++D + L + S+ N+LI + + A +
Sbjct: 782 YNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISY---NILIDGYCKNGNTREALDLRN 838
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
M + G+ PS TY+ L+ G+ K GDM LL +
Sbjct: 839 KMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDE 874
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H L + D+ + ++ Y + DF+ +++ G E N VTY LI I
Sbjct: 208 HINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSI- 266
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA-GLE 191
G++E A +L+ M ++ ++ LI G+ + + AE +L M ++ G+
Sbjct: 267 -----GDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMV 321
Query: 192 PSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDM 245
Y L+ GY + MD ++ ++ ++ + LF+C N LI + +
Sbjct: 322 LDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFIC------NALINGYCKNGQV 375
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ AE +L M LEP + +Y+ LM G+ + G
Sbjct: 376 SEAERLLMRMVDWDLEPESYSYSTLMDGFCREG 408
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 136/335 (40%), Gaps = 55/335 (16%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN--------------- 127
I YN+L+ ++ T D L+++ +G+ PN VTY LI+
Sbjct: 569 IELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYF 628
Query: 128 --------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
SK++S + G I+ A +L+ M + + G F+ L
Sbjct: 629 DMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNL 688
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ 233
D L S++ P++ Y + G K G +D K SL + F +F
Sbjct: 689 DSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRG--FSPDNFT 746
Query: 234 LTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
L+ + ++ A + M + GL P+ TY L+ G K G++D ++L +
Sbjct: 747 YCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLH 806
Query: 292 SSLVNGDYLDII-HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYT 350
+ G ++I + + + G+ + + A+ L M+ + G+ PS TY+
Sbjct: 807 ---LKGLAPNVISYNILIDGYCKNGNTREALD---------LRNKMLKE-GISPSLITYS 853
Query: 351 KLMCGYAKHGDM-------DSIRRLLA-QNGSSLV 377
L+ G+ K GDM D +R L A QN + V
Sbjct: 854 ALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFV 888
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 8/148 (5%)
Query: 68 DPFSVHTGELDVPL--DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI 125
D FS+ L L +I YNAL+ + + KL +G+ PN ++Y LI
Sbjct: 762 DAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILI 821
Query: 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM 185
YC++GN A + M + S ++ALIYG + DM A +L M
Sbjct: 822 DG------YCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEM 875
Query: 186 SQAGLEPSAQTYTKLMCGYAKHGDMDSI 213
+ + + + KL+ G+ K G++ I
Sbjct: 876 RELFADQNIAKFVKLVEGHVKCGEVKKI 903
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 110/303 (36%), Gaps = 26/303 (8%)
Query: 67 EDPFSVHTGELDVPLDISHY--NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL 124
+D + L+V L ++ + NAL+ Y N L ++ +EP +Y
Sbjct: 341 DDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSY--- 397
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
S L+ +C++G + A + M + N+L+ G + A + +
Sbjct: 398 ---STLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHL 454
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
M + G+ P +Y L+ K G+ + + ++F
Sbjct: 455 MLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEK 514
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLD 301
M AE M + G EP TY L+ GY K G+++ ++ + + Y
Sbjct: 515 MIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNS 574
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+I L S + ++ + +C GL P+ TY L+ G+ G
Sbjct: 575 LIGGLFKSKKTREVMDLLSEMCL---------------KGLSPNVVTYGTLIAGWCDEGR 619
Query: 362 MDS 364
+D
Sbjct: 620 LDK 622
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 7/178 (3%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
GI P+ + + S +++ YC+DG + A ++ M F ++ +N+LI G
Sbjct: 213 GIVPD------VFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSI 266
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC-FS 231
DM AE +L +M + G+ + T T L+ GY + ++ + + ++ + L ++
Sbjct: 267 GDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYA 326
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ + M A + M GL + L+ GY K+G + RLL +
Sbjct: 327 YGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMR 384
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+ Y N +T D K+ +GI P+ +TY S LI +C+ G++
Sbjct: 813 NVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITY------SALIYGFCKQGDMG 866
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM 185
AT +L+ MR+ + F L+ GH + ++ + MM
Sbjct: 867 KATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 113/290 (38%), Gaps = 43/290 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N L+RV+ D FSPT F ++ YC+ G I+ A
Sbjct: 134 WNELVRVFED--FKFSPTVF----------------------DMILKIYCEKGMIKNALH 169
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M S N L+ + + ++A + +++ G+ P T + ++ Y
Sbjct: 170 VFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYC 229
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEP 262
K G + + +K L + N LI + DM AE +L +M + G+
Sbjct: 230 KDG---WVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILR 286
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD-IIHALAVSGHGEYIDEVSAI 321
+ T T L+ GY + ++ ++L + S G LD + + + G+ A+
Sbjct: 287 NKVTLTLLIKGYCRQCKLEEAEKVLREMERS--EGMVLDEYAYGVLIDGYCRVCKMDDAV 344
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
L M++ GL + L+ GY K+G + RLL +
Sbjct: 345 ---------RLRDEMLN-VGLRMNLFICNALINGYCKNGQVSEAERLLMR 384
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 6/215 (2%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
+ V D+ YN LL + ++ G++P+++TY + LI YC+
Sbjct: 357 MGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITY------TTLIDGYCK 410
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+G++E A +I + M ++ + F ALI G + + AE L M +AG++P T
Sbjct: 411 EGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDAT 470
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
YT ++ GY K G++ + ++ ++ + + M +A +L M
Sbjct: 471 YTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAML 530
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
G+ P TY L+ G+ K+G + + +L + G
Sbjct: 531 NLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKG 565
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 113/275 (41%), Gaps = 36/275 (13%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+++ +G+ PN +T+ LI C+ I+ A M ++N L+
Sbjct: 318 EMQQRGLRPNGITFTALIDGQ------CRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLN 371
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G + D+ A ++ M G++P TYT L+ GY K GD++S + + +
Sbjct: 372 GLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVL 431
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+F + AE L M +AG++P TYT ++ GY K G++ +LL
Sbjct: 432 DNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLL 491
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM---------MS 338
+ + ++GH + ++ V +C +G M M
Sbjct: 492 KE----------------MQINGHKPGV--ITYNVLMNGLC---KQGQMKNANMLLEAML 530
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
G+ P TY L+ G+ K+G + + +L + G
Sbjct: 531 NLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKG 565
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 106/263 (40%), Gaps = 54/263 (20%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+ +E NR+ Y + + S LI C++G ++ A ++ + M+ + + F ALI G +
Sbjct: 282 KTMEENRI-YPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
+ + SA M G++P Y L+ G K GD++
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVN-------------------- 380
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLA 288
A ++ M G++P TYT L+ GY K GD++S +R+ +
Sbjct: 381 ---------------KARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMN 425
Query: 289 QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
+ G L N + +I G + M +AG++P T
Sbjct: 426 EEGVVLDNVAFTALISGFCRDGRVRDAERTLR---------------EMVEAGMKPDDAT 470
Query: 349 YTKLMCGYAKHGDMDSIRRLLAQ 371
YT ++ GY K G++ +LL +
Sbjct: 471 YTMVIDGYCKKGNVKMGFKLLKE 493
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 126/313 (40%), Gaps = 33/313 (10%)
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
++ILE+ FP +N LI + + A+ I + + GL P+ ++ L+ G
Sbjct: 212 SEILEY----GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING 267
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
K ++D +++ F++ + + + AE + M Q GL P+
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSA 320
T+T L+ G + +DS Q + V D Y +++ L G +++
Sbjct: 328 GITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGD---VNKARK 384
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLV 377
+V M G++P TYT L+ GY K GD++S IR+ + + G L
Sbjct: 385 LV------------DEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLD 432
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIV 434
N + +I G + + ++ G D A + I KG + ++++
Sbjct: 433 NVAFTALISGFCRDGRVRDAERTLREMVEA-GMKPDDATYTMVIDGYCKKGNVKMGFKLL 491
Query: 435 NTLARSANINGEQ 447
+ ING +
Sbjct: 492 ----KEMQINGHK 500
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 172/415 (41%), Gaps = 34/415 (8%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD+ Y L+ V + D L ++ + G+ PN V Y + +I YC+ G +
Sbjct: 425 LDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIY------TSIIDAYCKVGKV 478
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A ++ + + + +++LIYG Q + A ++T M + G+ P TYT L
Sbjct: 479 GAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTL 538
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ G K + D+ ++ + Q+ L Q N+L AE + + + G+
Sbjct: 539 IQGQCKKHEFDN-AFRLFEMMEQNGLTP--DEQAYNVLTDALCKSGRAEEAYSFLVKKGV 595
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALA----VSGHGE 313
+ TYT L+ G++K G+ + L+ + + D Y ++ AL ++
Sbjct: 596 VLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALS 655
Query: 314 YIDEVSA------IVCFVNICFHWL-EGPM---------MSQAGLEPSAQTYTKLMCGYA 357
+D+++ IV + I + EG M +G +PSA TYT + Y
Sbjct: 656 ILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYC 715
Query: 358 KHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH 417
K G ++ L+ + + V D + + GH Y+D S ++ + S +
Sbjct: 716 KIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYW 775
Query: 418 IYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVK--TNQPGVGYSA 470
Y L+ K + + + + S N +L L+ MVK N V YS+
Sbjct: 776 TYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSS 830
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 110/504 (21%), Positives = 184/504 (36%), Gaps = 121/504 (24%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQ----GIEPNRVTYQQLISNSKLISKYCQDGNIE 141
YN LR L F T+ + KL SQ G+ P+ VTY + +I YC++G++
Sbjct: 151 YNLALRSLL----RFDMTEHMGKLYSQLVQEGLLPDTVTY------NTMIMAYCKEGSLA 200
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + +R+ + NAL+ G+ + D+ A +L MM G + +YT L+
Sbjct: 201 IAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILI 260
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G LC + + L+L L MM Q G
Sbjct: 261 QG------------------------LCETRCVREALVL-----------LLMMLQDGCS 285
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P+ TYT L+ G K G + R LL DE
Sbjct: 286 PNLHTYTLLIRGLCKEGRIHDARVLL----------------------------DE---- 313
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSSLVN 378
M + G+ PS TY ++ GY K G D I+ L+ NG + +
Sbjct: 314 ---------------MPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDD 358
Query: 379 GDYLDIIHALAVSGHGEYIDEIIS-KIQPGVGYSADAANHIYHLINKGQ-IDAAYRIVNT 436
Y +IH L G + +E+++ I G + +I + K + ID A R+ +
Sbjct: 359 WTYNSLIHGLC-GGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSI 417
Query: 437 LARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLA 496
+ S L G L+ ++K ++ + + D N I+ + I++
Sbjct: 418 MISSK--CKLDLQAYGVLISVLIKKHR--LKEAKDTLNEIFANGLSPNVVIYTSIIDAYC 473
Query: 497 RSANINGEQLPVGGFLVRHMVKTN--------------QPIDKVLAVCHRLTDENLHPRA 542
+ + G L V + N Q + K +A+ ++ ++ + P
Sbjct: 474 KVGKV-GAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGV 532
Query: 543 FNLAVLIKAHVLKEDYTGAVETFE 566
LI+ K ++ A FE
Sbjct: 533 ITYTTLIQGQCKKHEFDNAFRLFE 556
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 116/287 (40%), Gaps = 25/287 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L + FL K +G+ +VTY + L+ + + GN E
Sbjct: 566 DEQAYNVLTDALCKSGRAEEAYSFLVK---KGVVLTKVTY------TSLVDGFSKAGNTE 616
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++E M ++ ++ L+ + + A IL M+ G++ + YT ++
Sbjct: 617 FAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIII 676
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
K G D K+ + KP + + F + + A ++ M
Sbjct: 677 SEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKI-----GRIEEAGHLIGEME 731
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMD----SVRRLLAQSGSSLVNGDYLDIIHALAVS-GH 311
+ G+ P TY + G G MD +++R++ S +L + H L +S +
Sbjct: 732 RNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLAN 791
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
Y+D S + ++ + W M + GL P+A TY+ ++ G+ K
Sbjct: 792 AHYVD-TSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCK 837
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 106/261 (40%), Gaps = 37/261 (14%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
++G P +T+ + +I+ YC+ I+ A ++ M + + LI
Sbjct: 385 ARGFSPTVITF------TNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLI 438
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSE 225
+ + + A+ L + GL P+ YT ++ Y K G + + T+ +P +
Sbjct: 439 KKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAW 498
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
+ + L + A ++T M + G+ P TYT L+ G K + D+ R
Sbjct: 499 TYSSLIYGLIQ-----DQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 553
Query: 286 L---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
L + Q+G + Y + AL SG E + S +V + G+
Sbjct: 554 LFEMMEQNGLTPDEQAYNVLTDALCKSGRAE--EAYSFLV----------------KKGV 595
Query: 343 EPSAQTYTKLMCGYAKHGDMD 363
+ TYT L+ G++K G+ +
Sbjct: 596 VLTKVTYTSLVDGFSKAGNTE 616
>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Glycine max]
Length = 576
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 144/344 (41%), Gaps = 32/344 (9%)
Query: 82 DISHYNALLRVYLDNE-HTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ YN L+ + + + + +L LE++ I P TY + LI YC G +
Sbjct: 154 DVICYNLLIEAFGQKLLYKEAESTYLQLLEARCI-PTEDTY------ALLIKAYCISGLL 206
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A + MR+ P S V+NA I G + + AE I M + +P+ +TYT L
Sbjct: 207 EKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTTETYTML 266
Query: 201 MCGYAKHG-DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
+ Y K G ++K + + +C L N AE + M +AG
Sbjct: 267 INLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAR-EGLCEKAEEVFEQMQEAG 325
Query: 260 LEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
LEP Y LM Y++ G + L+ G Y ++ A +G + D
Sbjct: 326 LEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAG---FQD 382
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
+ A+ M + G+ P+ +++ L+ Y+K G ++ +L Q S
Sbjct: 383 DAEAVF------------KDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSG 430
Query: 377 VNGDYLDIIHALAVSGH-GEY--IDEIISKIQPGVGYSADAANH 417
+ D + L + G G++ ++E++ ++ G Y AD + +
Sbjct: 431 LKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKG-SYVADISTY 473
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 37/200 (18%), Positives = 83/200 (41%), Gaps = 16/200 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YNAL+ Y + + + + ++ G EP+R +Y + L+ Y + G +
Sbjct: 329 DVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASY------NILVDAYGKAGFQD 382
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M+ + L+ +S+ + E IL M ++GL+ ++
Sbjct: 383 DAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSML 442
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV-----SSDMASAEGILTMMS 256
Y + G ++ + ++ S + ++ IL+ + + E + ++
Sbjct: 443 NLYGRLGQFGKMEEVLRVMEKGS-----YVADISTYNILINRYGQAGFIERMEDLFQLLP 497
Query: 257 QAGLEPSAQTYTKLMCGYAK 276
GL+P T+T + Y+K
Sbjct: 498 SKGLKPDVVTWTSRIGAYSK 517
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 125/308 (40%), Gaps = 72/308 (23%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ + N +L++ D + + GI P TY ++ + +C+ G ++
Sbjct: 201 DVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHS------FCKGGEVQ 254
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ M+++ SE FN LI G S+ ++ A+G++ M++AGL S TY L+
Sbjct: 255 RALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLI 314
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
CGY K G L+ +A E ++T G+
Sbjct: 315 CGYCKKG-------------------------------LLVEALALWEEMVT----RGVS 339
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH-GE---Y 314
P+ ++ +M G+ K G M R+ L+ + D Y +I+ G+ GE
Sbjct: 340 PTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFIL 399
Query: 315 IDEVSAIVCFVNICFHW---------------LEGPM-----MSQAGLEPSAQTYTKLMC 354
+DE+ F N+ F+ LE + M G+ P TYT L+
Sbjct: 400 LDELR----FRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVN 455
Query: 355 GYAKHGDM 362
G K G+M
Sbjct: 456 GACKLGNM 463
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 134/354 (37%), Gaps = 50/354 (14%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------- 127
GE + ++ YN +L + D + K++ +G P+ VT+ LI+
Sbjct: 229 GEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGEL 288
Query: 128 ----------------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
+ LI YC+ G + A + E M + + N +
Sbjct: 289 QQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTI 348
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
+YG + M+ A L+ M + L P +Y L+ G+ + G++ + L+ ++
Sbjct: 349 MYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRN- 407
Query: 226 LFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
L F+ N LI D+ +A + M G+ P TYT L+ G K G+M
Sbjct: 408 --LSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLM 465
Query: 283 VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
+ + + D + + G + D A L+ M+++ G
Sbjct: 466 AKEFFDEMLHVGLAPD--QFAYTARIVGELKLGDTAKAFK---------LQEEMLTK-GF 513
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGSSLVNGDYLDIIHALAVSGH 393
P TY + G K G+++ LL + +G + Y +HA +GH
Sbjct: 514 PPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGH 567
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 117/293 (39%), Gaps = 40/293 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN L+ + + L +L + + N VTY LI C+ G++E
Sbjct: 376 DIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDG------LCRLGDLE 429
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ E M ++ + L+ G + +M A+ M GL P YT +
Sbjct: 430 TALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARI 489
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELF--------LCFSFQLTNLLILVSSDMASAEGILT 253
G K GD + K Q E+ + ++ + L L ++ A +L
Sbjct: 490 VGELKLGDTAK------AFKLQEEMLTKGFPPDVITYNVFVNGLCKL--GNLEEAGELLQ 541
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSG 310
M + G P TYT M + ++G + R + + G + Y +IHA A++G
Sbjct: 542 KMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNG 601
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+D A ++LE M + G+ P+ TY L+ G+ K MD
Sbjct: 602 R---LDWAMA---------YFLE---MQEKGVVPNVITYNVLINGFCKVRKMD 639
>gi|242049534|ref|XP_002462511.1| hypothetical protein SORBIDRAFT_02g027050 [Sorghum bicolor]
gi|241925888|gb|EER99032.1| hypothetical protein SORBIDRAFT_02g027050 [Sorghum bicolor]
Length = 643
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 38/244 (15%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS----NSK-- 129
E + +++ YN L++ + D + + K+ + G+EP+ VTY + S N +
Sbjct: 206 EGSIKPNLTTYNILVKAWCDRRNLEEAWGVVGKMRAGGVEPDIVTYNTIASAYANNDETW 265
Query: 130 ----------------------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+I YC++ +E A + ++ M+D + +FN L+
Sbjct: 266 RAEELIVEIQTRVRTSERTWGIIIGGYCRESRLEEALRCVQQMKDAGIVPNVVIFNTLLK 325
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKP 222
G NDMA+ IL +M Q G++P TY+ + ++ G M K ++P
Sbjct: 326 GFLDVNDMAAVNNILGLMEQFGIKPDIVTYSHQLNTFSSLGHMAKCMKVFDKMIEAGIEP 385
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+++ + + AE +L MS G+ P+ T+T ++ G+ DM+S
Sbjct: 386 DPQVYSILAKGFVR-----AKQPEKAEDLLLQMSHLGVCPNVVTFTTVISGWCSVADMES 440
Query: 283 VRRL 286
R+
Sbjct: 441 AMRV 444
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 112/294 (38%), Gaps = 26/294 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D +NAL+ +++ + + K++ G P T+ LI ++ G E
Sbjct: 141 DSIFFNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIV------GKPE 194
Query: 142 GATKILEFMR-DKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ ++ + M + + + +N L+ ++ A G++ M G+EP TY +
Sbjct: 195 ESQRVFDMMGIEGSIKPNLTTYNILVKAWCDRRNLEEAWGVVGKMRAGGVEPDIVTYNTI 254
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQ 257
YA + + + I ++ + S + ++I S + A + M
Sbjct: 255 ASAYANNDETWRAEELIVEIQTRVRT----SERTWGIIIGGYCRESRLEEALRCVQQMKD 310
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
AG+ P+ + L+ G+ DM +V +L + D + H L ++ +
Sbjct: 311 AGIVPNVVIFNTLLKGFLDVNDMAAVNNILGLMEQFGIKPDIVTYSHQLNTFSSLGHMAK 370
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ M +AG+EP Q Y+ L G+ + + LL Q
Sbjct: 371 CMKVF------------DKMIEAGIEPDPQVYSILAKGFVRAKQPEKAEDLLLQ 412
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 132/358 (36%), Gaps = 54/358 (15%)
Query: 90 LRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEF 149
+R +D+ + L +G +P+ VTY L++ + ++ ++
Sbjct: 79 MRALIDSNKPYQAHSVFKHLMEEGHKPSLVTYTILLTALTNQRMFESIPSLLAQVELAGI 138
Query: 150 MRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG- 208
D F FNALI +A M A M +G P+ T+ L+ GY G
Sbjct: 139 RPDSIF------FNALINAFVEAKRMGEAINTFWKMKHSGCHPTTSTFNTLIKGYGIVGK 192
Query: 209 --------DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS-----DMASAEGILTMM 255
DM I+ S+KP LT ILV + ++ A G++ M
Sbjct: 193 PEESQRVFDMMGIEG---SIKP----------NLTTYNILVKAWCDRRNLEEAWGVVGKM 239
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
G+EP TY + YA + + L+ + + + + + + G+
Sbjct: 240 RAGGVEPDIVTYNTIASAYANNDETWRAEELIVEIQTRVRTSER---TWGIIIGGYCRES 296
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
A+ C M AG+ P+ + L+ G+ DM ++ +L
Sbjct: 297 RLEEALRCV----------QQMKDAGIVPNVVIFNTLLKGFLDVNDMAAVNNILGLMEQF 346
Query: 376 LVNGDYLDIIHAL---AVSGHGEYIDEIISK-IQPGVGYSADAANHIYHLINKGQIDA 429
+ D + H L + GH ++ K I+ G+ + +Y ++ KG + A
Sbjct: 347 GIKPDIVTYSHQLNTFSSLGHMAKCMKVFDKMIEAGI----EPDPQVYSILAKGFVRA 400
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 120/302 (39%), Gaps = 66/302 (21%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y L+R D + + L ++ GIEPN V Y S L+ YC+ G E
Sbjct: 128 DVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVY------SCLLHGYCKTGRWE 181
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
K+ E M + ++ ALI + + A ++ MM++ GLEP+ TY L+
Sbjct: 182 SVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLI 241
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
K G S++ + K MS+ G++
Sbjct: 242 NSMCKEG---SVREALDLRKN--------------------------------MSEKGVQ 266
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ--SGSSLVNGDYL---DIIHALAVSGHGEYID 316
P TY L+ G + +MD LL + G + V D + +IH L G
Sbjct: 267 PDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQAL 326
Query: 317 EVSAIV----CFVN-ICFHWLEGPM---------------MSQAGLEPSAQTYTKLMCGY 356
+V A++ C N + F+ L G + M+ +GL+P + TY+ L+ G+
Sbjct: 327 QVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGF 386
Query: 357 AK 358
K
Sbjct: 387 CK 388
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 140/341 (41%), Gaps = 37/341 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN +L L + FL ++ S EP + IS + L+ C D
Sbjct: 55 DAVSYNTVL-AALCRQGCLDAALFLLRVMSH--EPRLASRPNAISYTTLMRALCADRRAA 111
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L M+D + LI G A D+ +A +L M ++G+EP+ Y+ L+
Sbjct: 112 QAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLL 171
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
GY K G +S+ + +P ++ L + A ++ MM+
Sbjct: 172 HGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCR-----HGKVKKAARVMDMMT 226
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAVSGHGEYI 315
+ GLEP+ TY L+ K G SVR L + G D++ + ++G +
Sbjct: 227 ERGLEPNVVTYNVLINSMCKEG---SVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVL 283
Query: 316 --DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLA 370
DE A+ LE M + + P T+ ++ G K G M +R ++A
Sbjct: 284 EMDEAMAL----------LEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMA 333
Query: 371 QNG--SSLVNGDYL--DIIHALAVSGHGEYIDEIISK-IQP 406
+NG +LV + L ++ V E +DE+ S +QP
Sbjct: 334 ENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQP 374
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 159/406 (39%), Gaps = 54/406 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y AL+ + + + +G+EPN VTY LI++ C++G++
Sbjct: 198 DVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINS------MCKEGSVR 251
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA--GLEPSAQTYTK 199
A + + M +K +N LI G S +M A +L M Q + P T+
Sbjct: 252 EALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNS 311
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
++ G K G M + +F L +L + A ++ M+ +G
Sbjct: 312 VIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSG 371
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGH-GEYI 315
L+P + TY+ L+ G+ K ++ L++ G Y+ ++ A+ G G+
Sbjct: 372 LQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQAR 431
Query: 316 D-----------EVSAIVCFVNICFHWLEGPM-------MSQAGLEPSAQTYTKLMCGYA 357
D + +A ++ F E + M GL P A TY+ + +A
Sbjct: 432 DLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFA 491
Query: 358 KHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDE--------------- 399
K GD+ + R+L Q +S D + +I G E I E
Sbjct: 492 KSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPK 551
Query: 400 IISKIQPGVGYSADAANHIYHL------INKGQIDAAYRIVNTLAR 439
IIS I +G S + + L I+KG + + + ++N L +
Sbjct: 552 IISTIVTSLGASIEGQKLLQSLPGFDTEISKGDVISPHDVMNMLQK 597
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 118/301 (39%), Gaps = 22/301 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
ELD ++ Y+ ++ N D + S GI P VTY LI C
Sbjct: 237 ELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYG------MC 290
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G + A+ + + M + F+ L+ + + A + M Q +EP
Sbjct: 291 NSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIV 350
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
TY+ L+ G K T + + ++ +F + + ++ A+ I+ +M
Sbjct: 351 TYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLM 410
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH--GE 313
+ GL P+ TY LM GY H MD R++ + D L + + + G+ E
Sbjct: 411 IERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLS--YNILIKGYCKSE 468
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
IDE + MS GL P++ T+T L+ G + G + + L + G
Sbjct: 469 RIDEAKQLF------------DEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMG 516
Query: 374 S 374
S
Sbjct: 517 S 517
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 101/288 (35%), Gaps = 53/288 (18%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E ++ D+ ++ L+ K+ +EP+ VTY S LI C
Sbjct: 307 EWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTY------SSLIHGVC 360
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ + ++ +L M + F+ + + ++ A+ I+ +M + GL P+
Sbjct: 361 KSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVV 420
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
TY LM GY H MD A + +M
Sbjct: 421 TYNSLMDGYCLHSQMD-----------------------------------EARKVFDIM 445
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
G P +Y L+ GY K +D ++L + + + I H +SG +
Sbjct: 446 VNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPN--SITHTTLISGLCQAG 503
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+A F M G P TY+ L+ G+ KHG +D
Sbjct: 504 RPYAAKELF----------KKMGSHGCPPDLITYSTLLSGFCKHGHLD 541
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN+L+ Y + + ++G P+ ++Y LI YC+ I+
Sbjct: 418 NVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKG------YCKSERID 471
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + M K + LI G QA +A+ + M G P TY+ L+
Sbjct: 472 EAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLL 531
Query: 202 CGYAKHGDMDSIKTKIPSLK 221
G+ KHG +D +LK
Sbjct: 532 SGFCKHGHLDEALALFEALK 551
Score = 45.8 bits (107), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 6/139 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L++ Y +E ++ +G+ PN +T+ + LIS CQ G
Sbjct: 453 DVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITH------TTLISGLCQAGRPY 506
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + M P ++ L+ G + + A + + ++ L+P+ L+
Sbjct: 507 AAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILL 566
Query: 202 CGYAKHGDMDSIKTKIPSL 220
G K G ++ K SL
Sbjct: 567 GGMCKAGKLEDAKELFSSL 585
>gi|168045490|ref|XP_001775210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673423|gb|EDQ59946.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 404
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 138/337 (40%), Gaps = 42/337 (12%)
Query: 29 TTVLGALGAFLVLLVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNA 88
T ++ A G + L V+ + K +EP+ P + C +D + Y+
Sbjct: 85 TALVNAYGKAKMFEEALAVFSHMKESNEPNCQPNTVTC-------NALIDALVKGGLYDQ 137
Query: 89 LLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILE 148
++V+ D D LE G EPN +TY + LI C++G ++ K+L+
Sbjct: 138 AIQVFFDMR------DGTNGLE-HGCEPNVITY------NVLIDALCKEGLLDIGMKVLQ 184
Query: 149 FMRD----KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
+MRD ++ + +N LI + AE ++ +M + G++P TYT L+ Y
Sbjct: 185 YMRDGNTDQSVQPNSATYNTLINACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAY 244
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
K G ++ + +K + ++ AE + MM +GL P+
Sbjct: 245 GKAGLWENAENTFKGMKGTNVSVDVMAYTAMIDAYGREGLYQKAEEMFKMMQHSGLRPNQ 304
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAI 321
TY LM Y K G + R + S G+ Y +I A +G+ Y++ +
Sbjct: 305 VTYLSLMEAYGKAGLPEESRNVFNIMRESGYEGNVLIYSSLIDAYGKAGN--YLEAARML 362
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
MM +AG +P+ TY+ ++ K
Sbjct: 363 -------------DMMRRAGCQPNLITYSAILSSCCK 386
Score = 39.7 bits (91), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 88/227 (38%), Gaps = 49/227 (21%)
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKI----------PSLKPQSELFLCFSFQLTNLL 238
G EP+ TY L+ K G +D I K+ S++P S + N L
Sbjct: 155 GCEPNVITYNVLIDALCKEGLLD-IGMKVLQYMRDGNTDQSVQPNSATY--------NTL 205
Query: 239 ILVSSD---MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV 295
I AE ++ +M + G++P TYT L+ Y K G ++ + V
Sbjct: 206 INACGKGGLYEKAEELVDLMVEHGVQPDHITYTALIDAYGKAGLWENAENTFKGMKGTNV 265
Query: 296 NGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
+ D Y +I A G + +E+ MM +GL P+ TY L
Sbjct: 266 SVDVMAYTAMIDAYGREGLYQKAEEMF---------------KMMQHSGLRPNQVTYLSL 310
Query: 353 MCGYAKHG------DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
M Y K G ++ +I R G+ L+ Y +I A +G+
Sbjct: 311 MEAYGKAGLPEESRNVFNIMRESGYEGNVLI---YSSLIDAYGKAGN 354
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 129/321 (40%), Gaps = 45/321 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y ++ + LA++ S G PN +T+ + L+ + +DG +
Sbjct: 203 NVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF------TALVKGFFEDGKVH 256
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + +M D+ + S +N LI G D+ A M + L P+A TY+ L+
Sbjct: 257 DALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLV 316
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA--SAEGILTM 254
G++ GD+D + K KP ++ TN++ ++ M AE ++
Sbjct: 317 DGFSNAGDLDGAMLIWNEMKSSGCKPNVVVY-------TNMIDVLCKKMMFDQAESLIDK 369
Query: 255 MSQAGLEPSAQTYTKL---MCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG- 310
M P+ T+ L +C + G +V + ++G + Y +++H L G
Sbjct: 370 MLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGN 429
Query: 311 HGEYIDEV----------------SAIVCFVNICFH----WLEGPMMSQAGLEPSAQTYT 350
H + V + I C +C L G MM Q G++P A T+
Sbjct: 430 HKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQ-GIQPDAFTFN 488
Query: 351 KLMCGYAKHGDMDSIRRLLAQ 371
++ Y K G + LL Q
Sbjct: 489 AIIHAYCKEGKVSIAACLLGQ 509
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 111/285 (38%), Gaps = 64/285 (22%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+R N+ + L ++ +G P+ V S+ ++S C+ G +E
Sbjct: 103 NVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEV------SHGTIVSGMCKLGRVE 156
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A L +T P+ + +NA+++ M ++ M Q GL+P+ TYT ++
Sbjct: 157 EARGFLA----ETVPV-QASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIV 211
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+ K + ++ A IL M G
Sbjct: 212 DAFCK-----------------------------------ARELRMACAILARMVSMGCT 236
Query: 262 PSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P+ T+T L+ G+ + G D S+ + G + Y +I L G ++
Sbjct: 237 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIG------DL 290
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+ F N M + L P+A TY+ L+ G++ GD+D
Sbjct: 291 KGALDFFN---------SMKRNALLPNATTYSTLVDGFSNAGDLD 326
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 129/321 (40%), Gaps = 45/321 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y ++ + LA++ S G PN +T+ + L+ + +DG +
Sbjct: 256 NVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF------TALVKGFFEDGKVH 309
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + +M D+ + S +N LI G D+ A M + L P+A TY+ L+
Sbjct: 310 DALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLV 369
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA--SAEGILTM 254
G++ GD+D + K KP ++ TN++ ++ M AE ++
Sbjct: 370 DGFSNAGDLDGAMLIWNEMKSSGCKPNVVVY-------TNMIDVLCKKMMFDQAESLIDK 422
Query: 255 MSQAGLEPSAQTYTKL---MCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG- 310
M P+ T+ L +C + G +V + ++G + Y +++H L G
Sbjct: 423 MLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGN 482
Query: 311 HGEYIDEV----------------SAIVCFVNICFH----WLEGPMMSQAGLEPSAQTYT 350
H + V + I C +C L G MM Q G++P A T+
Sbjct: 483 HKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQ-GIQPDAFTFN 541
Query: 351 KLMCGYAKHGDMDSIRRLLAQ 371
++ Y K G + LL Q
Sbjct: 542 AIIHAYCKEGKVSIAACLLGQ 562
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 111/285 (38%), Gaps = 64/285 (22%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+R N+ + L ++ +G P+ V S+ ++S C+ G +E
Sbjct: 156 NVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEV------SHGTIVSGMCKLGRVE 209
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A L +T P+ + +NA+++ M ++ M Q GL+P+ TYT ++
Sbjct: 210 EARGFLA----ETVPV-QASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIV 264
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+ K + ++ A IL M G
Sbjct: 265 DAFCK-----------------------------------ARELRMACAILARMVSMGCT 289
Query: 262 PSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P+ T+T L+ G+ + G D S+ + G + Y +I L G ++
Sbjct: 290 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIG------DL 343
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+ F N M + L P+A TY+ L+ G++ GD+D
Sbjct: 344 KGALDFFN---------SMKRNALLPNATTYSTLVDGFSNAGDLD 379
>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
Group]
gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
Length = 618
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 89/197 (45%), Gaps = 41/197 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+L+ + + F ++ +G+ P+ T S ++ C G ++ AT+
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFT------CSIVVRGLCDGGQMQVATR 369
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
LE M+ ++ +N LI + ++ ++ A T MS+ G+EP+ TY+ L+ G++
Sbjct: 370 FLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHS 429
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K+G+M+ A I T M G+EP+
Sbjct: 430 KNGEME-----------------------------------IAMAIYTEMVAKGVEPNVV 454
Query: 266 TYTKLMCGYAKHGDMDS 282
TYT L+ G+AK+GDMD+
Sbjct: 455 TYTALIHGHAKNGDMDA 471
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 149/372 (40%), Gaps = 70/372 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNAL+ + ++ F L G+ PN V + + LI CQ I A
Sbjct: 246 YNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIF------TTLIDGLCQANRITEAKN 299
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I M + V+N+LI+G ++ A + + GL P T + ++ G
Sbjct: 300 IFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIVVRGLC 359
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEP 262
G M + T+ + QS + L + N+LI S ++ A T MS+ G+EP
Sbjct: 360 DGGQM-QVATRFLEVMQQSGIAL--NAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEP 416
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
+ TY+ L+ G++K+G+M+ +A++ + E
Sbjct: 417 NVVTYSSLIDGHSKNGEME------------------------IAMAIYTE--------- 443
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNG------ 373
M G+EP+ TYT L+ G+AK+GDMD+ +++ + + G
Sbjct: 444 --------------MVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAI 489
Query: 374 --SSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAY 431
S LV+G + AV EY + S+ P + S IY L GQ + A
Sbjct: 490 TVSVLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEAC 549
Query: 432 RIVNTLARSANI 443
+ + S +
Sbjct: 550 HFFSCMRDSGMV 561
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 12/206 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ L+ + YN L+ Y + + ++ G+EPN VTY S LI + ++G
Sbjct: 379 IALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTY------SSLIDGHSKNG 432
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A I M K + + ALI+GH++ DM +A + M + G+ +A T +
Sbjct: 433 EMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVS 492
Query: 199 KLMCGYAKHGDM-DSIKTKIP-SLKPQSELFLCFSFQLTNLLIL----VSSDMASAEGIL 252
L+ G + + D+++ + S + +SE + +T + ++ + A
Sbjct: 493 VLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFF 552
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ M +G+ P TYT ++ G G
Sbjct: 553 SCMRDSGMVPDRFTYTLVIRGLCMLG 578
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 141/343 (41%), Gaps = 37/343 (10%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P I +N L+ + + ++ +G+ P V++ LIS C+ G+
Sbjct: 245 PPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGC------CKSGD 298
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+E ++ M + F+ALI G + + + M GL P+ T+T
Sbjct: 299 VEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTT 358
Query: 200 LMCGYAKHGDMD-SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G K G +D ++K L L L N L V D+ A ++ M+ +
Sbjct: 359 LIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKV-GDLKEARRLVNEMTAS 417
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGH---- 311
GL+P T+T L+ G K GDM+S ++R + + G L + + +I L G
Sbjct: 418 GLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDA 477
Query: 312 GEYI-DEVSA------------IVCF-----VNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
G + D +SA I CF V + F L+ M G P TY LM
Sbjct: 478 GRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKE--MQSDGHVPGVVTYNALM 535
Query: 354 CGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEY 396
G K G M + + LL + V + DI + + + GH ++
Sbjct: 536 NGLCKQGQMKNAKMLLDAMLNVGVAPN--DITYNILLDGHSKH 576
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 91/197 (46%), Gaps = 6/197 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YNAL+ + ++ + G++P+++T+ LI C+DG++E
Sbjct: 387 DLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGC------CKDGDME 440
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I M ++ + + F ALI G + + A +LT M AG +P TYT ++
Sbjct: 441 SALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVI 500
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+ K GD+ + ++ + ++ + M +A+ +L M G+
Sbjct: 501 DCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVA 560
Query: 262 PSAQTYTKLMCGYAKHG 278
P+ TY L+ G++KHG
Sbjct: 561 PNDITYNILLDGHSKHG 577
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 133/312 (42%), Gaps = 43/312 (13%)
Query: 152 DKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 211
D +P FN L++G +A D+ +A + + + GL P+ ++ L+ G K GD++
Sbjct: 241 DSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVE 300
Query: 212 S---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYT 268
+K + S ++F FS + L D S + M GL P+ T+T
Sbjct: 301 EGFRLKGVMESEGVCPDVFT-FSALINGLCKEGRLDEGSL--LFDEMCGRGLVPNGVTFT 357
Query: 269 KLMCGYAKHGDMD----SVRRLLAQS-GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVC 323
L+ G K G +D + + +LAQ LV Y +I+ L G + E +V
Sbjct: 358 TLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVT--YNALINGLCKVGD---LKEARRLV- 411
Query: 324 FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGD 380
M+ +GL+P T+T L+ G K GDM+S I+R + + G L +
Sbjct: 412 -----------NEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVA 460
Query: 381 YLDIIHALAVSGH----GEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRI 433
+ +I L G G + +++S G+ D + I KG + +++
Sbjct: 461 FTALISGLCREGRVHDAGRMLTDMLS-----AGFKPDDPTYTMVIDCFCKKGDVKMGFKL 515
Query: 434 VNTLARSANING 445
+ + ++ G
Sbjct: 516 LKEMQSDGHVPG 527
>gi|357436523|ref|XP_003588537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477585|gb|AES58788.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 653
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/398 (20%), Positives = 170/398 (42%), Gaps = 35/398 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +LL + S ++++E + ++ N + Y + +I+ + + GN+E A K
Sbjct: 112 YTSLLHALTMQKCFKSIHSLVSQVEEKQMKTNSIFY------NAVINAFAESGNMEDAKK 165
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM-SQAGLEPSAQTYTKLMCGY 204
++ M++ F S G ++ LI G+ A +L +M + +P QTY L+
Sbjct: 166 TVQKMKESGFRPSTGTYSNLIKGYGIVGKSGEAMKLLDLMLTDGNSKPDLQTYNMLIKAL 225
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
+ G+M + + L +F + +++S+ A AE ++ M + GLEP+
Sbjct: 226 CQSGNMSEAWNIVCKMPASGMLPDSVTFNTMAIGYVLNSETAEAEAMILEMQRKGLEPNE 285
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL---DIIHALAVSGHGEYIDEVSAI 321
+T+T ++ GY K G + + + + + L +I+ + +DE S
Sbjct: 286 RTFTVIVNGYYKEGQIKEALQFVYRIKDLGFKPNLLVFNVLINGFVDRMDRDGVDEFSNT 345
Query: 322 VCFVNICFHWLEGP----MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
F + + P +M + ++P TY+ +M +++ G D +++ S V
Sbjct: 346 --FAQEGKNQVTTPLVLRLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSGV 403
Query: 378 NGD---YLDIIHALAVSGHGEYIDEII-----SKIQPGVGYSADAANHIYHLINKGQIDA 429
D Y ++ S E +E++ S ++P V N I + G++D
Sbjct: 404 KPDVHAYSILVKGYVRSMETEKAEELLGDMIESGVRPNV---VTFTNVISGWGSSGRMDN 460
Query: 430 AYRIVNTLAR---SANINGEQLPVGGFLVRHMVKTNQP 464
A +I + + S N+ + + G+ K +QP
Sbjct: 461 AIKIFDKMCELGVSPNLRTFEALIWGY-----AKADQP 493
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 124/287 (43%), Gaps = 42/287 (14%)
Query: 31 VLGALGAFLVLLVLLFVYLNSK------------WCSEPSLGPG-NLPCEDPFSVHTGEL 77
++G G + LL L+ NSK C ++ N+ C+ P S G L
Sbjct: 191 IVGKSGEAMKLLDLMLTDGNSKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPAS---GML 247
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D +N + Y+ N T + +++ +G+EPN T+ + +++ Y ++
Sbjct: 248 P---DSVTFNTMAIGYVLNSETAEAEAMILEMQRKGLEPNERTF------TVIVNGYYKE 298
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGH---------SQANDMASAEG-------- 180
G I+ A + + ++D F + VFN LI G + ++ + EG
Sbjct: 299 GQIKEALQFVYRIKDLGFKPNLLVFNVLINGFVDRMDRDGVDEFSNTFAQEGKNQVTTPL 358
Query: 181 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL 240
+L +M + ++P TY+ +M +++ G D K ++ ++ + +
Sbjct: 359 VLRLMKEFQIQPDVVTYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYV 418
Query: 241 VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
S + AE +L M ++G+ P+ T+T ++ G+ G MD+ ++
Sbjct: 419 RSMETEKAEELLGDMIESGVRPNVVTFTNVISGWGSSGRMDNAIKIF 465
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 24/194 (12%)
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+C +L N+LI+ A A I + + G +PS TYT L+ S+ L+
Sbjct: 74 VCSRTKLLNILIVCGKPQA-ANVIFKKLIEEGHQPSLITYTSLLHALTMQKCFKSIHSLV 132
Query: 288 AQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
+Q + + Y +I+A A SG+ E D + M ++G P
Sbjct: 133 SQVEEKQMKTNSIFYNAVINAFAESGNME--DAKKTV-------------QKMKESGFRP 177
Query: 345 SAQTYTKLMCGY---AKHGDMDSIRRLLAQNGSSLVN-GDYLDIIHALAVSGHGEYIDEI 400
S TY+ L+ GY K G+ + L+ +G+S + Y +I AL SG+ I
Sbjct: 178 STGTYSNLIKGYGIVGKSGEAMKLLDLMLTDGNSKPDLQTYNMLIKALCQSGNMSEAWNI 237
Query: 401 ISKIQPGVGYSADA 414
+ K+ P G D+
Sbjct: 238 VCKM-PASGMLPDS 250
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 18/259 (6%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL+ +E +G+ + VTY + LI+ YC++G +E A ++L + +NA
Sbjct: 279 FLSDMEGKGVFADIVTY------NTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNA 332
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
++YG + A+ +L M Q GL P+A TY L+ + ++ + + +
Sbjct: 333 ILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRG 392
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
L SF ++ + + A M ++G+ P YT L+ G+ ++G +
Sbjct: 393 VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDA- 451
Query: 285 RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
L L G ++D++ + +++ + F + + E M + G+ P
Sbjct: 452 --LKMRDEMLARGCFMDVVT------YNTFLNGLCKKKMFADADMLFNE---MVERGMVP 500
Query: 345 SAQTYTKLMCGYAKHGDMD 363
T+T L+ GY K G+MD
Sbjct: 501 DFYTFTTLIRGYCKDGNMD 519
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 92/237 (38%), Gaps = 30/237 (12%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI------------- 125
VP D + L+R Y + + + + ++P++VTY LI
Sbjct: 499 VP-DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAK 557
Query: 126 ----------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
S +++ +C G + A + + M +K + N LI G+
Sbjct: 558 ELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGY 617
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC 229
++ DM A L+ M G+ P + +Y L+ GY K +++ I ++ + F
Sbjct: 618 CRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNI 677
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
++ L M AE +L M + G+ P TY+ L+ G+ +M R
Sbjct: 678 ITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRF 734
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 46/302 (15%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFL-AKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
+D+ YN L L + F+ D L ++ +G+ P+ T+ + LI YC+DGN
Sbjct: 465 MDVVTYNTFLNG-LCKKKMFADADMLFNEMVERGMVPDFYTF------TTLIRGYCKDGN 517
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
++ A + E M + +N LI G +A +M A+ + M + + P +Y
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGT 577
Query: 200 LMCGYAKHGDM-------DSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAE 249
++ G+ G + D + K ++P L C N LI S DM A
Sbjct: 578 VLNGFCSSGLLPEALNLCDQMLEK--GIRPN--LVTC------NTLIKGYCRSGDMPKAY 627
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHAL 306
L+ M G+ P + +Y L+ GY K +++ L + + G Y I++
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G + ++V M + G+ P TY+ L+ G+ +M
Sbjct: 688 CAEGKMQEAEQVLR---------------KMIEIGINPDGATYSSLINGHVSQDNMKEAF 732
Query: 367 RL 368
R
Sbjct: 733 RF 734
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 132/344 (38%), Gaps = 64/344 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ +++L+ V N H + ++E GI P+ V Y + LI +C++G +
Sbjct: 396 DLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY------TILIDGFCRNGALS 449
Query: 142 GATKILEFM--------------------RDKTFPISEGVFN---------------ALI 166
A K+ + M + K F ++ +FN LI
Sbjct: 450 DALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLI 509
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL 226
G+ + +M A + M + L+P TY L+ G+ K G+M K + + +
Sbjct: 510 RGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDII 569
Query: 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
S+ S + A + M + G+ P+ T L+ GY + GDM
Sbjct: 570 PDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEY 629
Query: 287 LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
L++ S+ + D + + G Y+ E + F+ I M + GL+ +
Sbjct: 630 LSKMISNGIIPDSFS--YNTLIDG---YLKEANLEKAFILI-------NEMEKRGLQFNI 677
Query: 347 QTYTKLMCGYAKHGDMDSIRRLLAQ-----------NGSSLVNG 379
TY ++ G+ G M ++L + SSL+NG
Sbjct: 678 ITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 128/345 (37%), Gaps = 76/345 (22%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY------- 134
DI YN L+ Y L S+G+EP +TY ++ I KY
Sbjct: 291 DIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350
Query: 135 ----------------------CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
C+ NI A +I + M + F++LI ++
Sbjct: 351 IEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARN 410
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL--CF 230
+ A M ++G+ P YT L+ G+ ++G + +LK + E+ CF
Sbjct: 411 GHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSD------ALKMRDEMLARGCF 464
Query: 231 SFQLT-NLLI--LVSSDM-ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+T N + L M A A+ + M + G+ P T+T L+ GY K G+MD L
Sbjct: 465 MDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNL 524
Query: 287 LAQ-----------SGSSLVNGD------------YLDIIHALAVSGHGEYIDEVSAIVC 323
+ ++L++G + D+I + H Y ++
Sbjct: 525 FEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCS 584
Query: 324 ------FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+N+C LE G+ P+ T L+ GY + GDM
Sbjct: 585 SGLLPEALNLCDQMLE------KGIRPNLVTCNTLIKGYCRSGDM 623
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L+ YL + + ++E +G++ N +TY +++ +C +G ++
Sbjct: 641 DSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNG------FCAEGKMQ 694
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
A ++L M + +++LI GH ++M A M Q GL P
Sbjct: 695 EAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 22/244 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ Y + + ++ G+ PN VT L+ C+ G I GA +
Sbjct: 419 YNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDG------MCKHGRINGAVE 472
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
M+ K + + ALI N++ A + M +AG P A Y L+ G +
Sbjct: 473 FFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLS 532
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS-----SDMASAEGILTMMSQAGL 260
+ G +D + +K FS + + +L++ + + A +L M AG+
Sbjct: 533 QAGKLDRASFVLSKMKEAG-----FSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGI 587
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
+P TY L+ ++K GD + RL + + G Y +IHA ++G+ +DE
Sbjct: 588 KPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGN---LDE 644
Query: 318 VSAI 321
I
Sbjct: 645 AMKI 648
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 16/220 (7%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP ++ N L+ + +F +++ +G++ N VTY + LI +C
Sbjct: 447 VPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTY------TALIRAFCNVN 500
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
NIE A ++ + M + V+ LI G SQA + A +L+ M +AG P ++
Sbjct: 501 NIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFN 560
Query: 199 KLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
L+ G+ + +D + + KP + + + D ++A ++
Sbjct: 561 VLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSK-----TGDFSTAHRLMK 615
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293
M + GL P+ TY L+ Y +G++D ++ S+
Sbjct: 616 KMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSST 655
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 125/331 (37%), Gaps = 65/331 (19%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
PN VTY LI YC+ IE A ++ + M P + N L+ G + +
Sbjct: 414 PNTVTYNCLIDG------YCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRI 467
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT 235
A M GL+ +A TYT L+ + + +++ ELF
Sbjct: 468 NGAVEFFNEMQGKGLKGNAVTYTALIRAFC----------NVNNIEKAMELF-------- 509
Query: 236 NLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV 295
M +AG P A Y L+ G ++ G +D +L++ +
Sbjct: 510 -----------------DEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGF 552
Query: 296 NGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCG 355
+ D + + +DE ++ M AG++P TY L+
Sbjct: 553 SPDIVSFNVLINGFCRKNKLDEAYEML------------KEMENAGIKPDGVTYNTLISH 600
Query: 356 YAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSA 412
++K GD + RL + + G Y +IHA ++G+ +DE + + S
Sbjct: 601 FSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGN---LDEAMKIFRDMSSTSK 657
Query: 413 DAANHIYH--LIN----KGQIDAAYRIVNTL 437
N + + LIN K Q+D A +++ +
Sbjct: 658 VPPNTVIYNILINSLCRKNQVDLALSLMDDM 688
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 100/490 (20%), Positives = 187/490 (38%), Gaps = 53/490 (10%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
++K + PN + QLIS + C+ G + A +L + + NA
Sbjct: 257 LVSKFAEHEVFPNSIWLTQLIS------RLCRSGRTDRAWDVLHGLMKLGGVMEAASCNA 310
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKP-Q 223
L+ +A + +L M + ++P+ T+ L+ K +D + +
Sbjct: 311 LLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGE 370
Query: 224 SELFLCFSFQLT-NLLILVSSDMASAEGIL----TMMSQAGLEPSAQTYTKLMCGYAKHG 278
S FL +T N LI + E L M SQ P+ TY L+ GY K
Sbjct: 371 SNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKAS 430
Query: 279 DMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
+++ R L Q V + + + + + HG ++ V F N M
Sbjct: 431 MIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHG----RINGAVEFFN---------EM 477
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHG 394
GL+ +A TYT L+ + +++ L + + + D Y +I L+ +G
Sbjct: 478 QGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKL 537
Query: 395 EYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIV---------------NT 436
+ ++SK++ G+S D + I K ++D AY ++ NT
Sbjct: 538 DRASFVLSKMKEA-GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNT 596
Query: 437 LARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLA 496
L + G+ L++ MVK + A H Y L G +D A +I ++
Sbjct: 597 LISHFSKTGD-FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCL--NGNLDEAMKIFRDMS 653
Query: 497 RSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKE 556
++ + + + L+ + + NQ +D L++ + + + P + K K
Sbjct: 654 STSKVPPNTV-IYNILINSLCRKNQ-VDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKN 711
Query: 557 DYTGAVETFE 566
+ A E +
Sbjct: 712 WLSKAFELMD 721
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 18/259 (6%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL+ +E +G+ + VTY + LI+ YC++G +E A ++L + +NA
Sbjct: 279 FLSDMEGKGVFADIVTY------NTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNA 332
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
++YG + A+ +L M Q GL P+A TY L+ + ++ + + +
Sbjct: 333 ILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRG 392
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
L SF ++ + + A M ++G+ P YT L+ G+ ++G +
Sbjct: 393 VLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDA- 451
Query: 285 RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
L L G ++D++ + +++ + F + + E M + G+ P
Sbjct: 452 --LKMRDEMLARGCFMDVVT------YNTFLNGLCKKKMFADADMLFNE---MVERGMVP 500
Query: 345 SAQTYTKLMCGYAKHGDMD 363
T+T L+ GY K G+MD
Sbjct: 501 DFYTFTTLIRGYCKDGNMD 519
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 92/237 (38%), Gaps = 30/237 (12%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI------------- 125
VP D + L+R Y + + + + ++P++VTY LI
Sbjct: 499 VP-DFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAK 557
Query: 126 ----------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
S +++ +C G + A + + M +K + N LI G+
Sbjct: 558 ELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGY 617
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC 229
++ DM A L+ M G+ P + +Y L+ GY K +++ I ++ + F
Sbjct: 618 CRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNI 677
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
++ L M AE +L M + G+ P TY+ L+ G+ +M R
Sbjct: 678 ITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRF 734
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 121/302 (40%), Gaps = 46/302 (15%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFL-AKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
+D+ YN L L + F+ D L ++ +G+ P+ T+ + LI YC+DGN
Sbjct: 465 MDVVTYNTFLNG-LCKKKMFADADMLFNEMVERGMVPDFYTF------TTLIRGYCKDGN 517
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
++ A + E M + +N LI G +A +M A+ + M + + P +Y
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGT 577
Query: 200 LMCGYAKHGDM-------DSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAE 249
++ G+ G + D + K ++P L C N LI S DM A
Sbjct: 578 VLNGFCSSGLLPEALNLCDQMLEK--GIRPN--LVTC------NTLIKGYCRSGDMPKAY 627
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHAL 306
L+ M G+ P + +Y L+ GY K +++ L + + G Y I++
Sbjct: 628 EYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGF 687
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G + ++V M + G+ P TY+ L+ G+ +M
Sbjct: 688 CAEGKMQEAEQVLR---------------KMIEIGINPDGATYSSLINGHVSQDNMKEAF 732
Query: 367 RL 368
R
Sbjct: 733 RF 734
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 132/344 (38%), Gaps = 64/344 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ +++L+ V N H + ++E GI P+ V Y + LI +C++G +
Sbjct: 396 DLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY------TILIDGFCRNGALS 449
Query: 142 GATKILEFM--------------------RDKTFPISEGVFN---------------ALI 166
A K+ + M + K F ++ +FN LI
Sbjct: 450 DALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLI 509
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL 226
G+ + +M A + M + L+P TY L+ G+ K G+M K + + +
Sbjct: 510 RGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDII 569
Query: 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
S+ S + A + M + G+ P+ T L+ GY + GDM
Sbjct: 570 PDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEY 629
Query: 287 LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
L++ S+ + D + + G Y+ E + F+ I M + GL+ +
Sbjct: 630 LSKMISNGIIPDSFS--YNTLIDG---YLKEANLEKAFILI-------NEMEKRGLQFNI 677
Query: 347 QTYTKLMCGYAKHGDMDSIRRLLAQ-----------NGSSLVNG 379
TY ++ G+ G M ++L + SSL+NG
Sbjct: 678 ITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 128/345 (37%), Gaps = 76/345 (22%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY------- 134
DI YN L+ Y L S+G+EP +TY ++ I KY
Sbjct: 291 DIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVL 350
Query: 135 ----------------------CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
C+ NI A +I + M + F++LI ++
Sbjct: 351 IEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARN 410
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL--CF 230
+ A M ++G+ P YT L+ G+ ++G + +LK + E+ CF
Sbjct: 411 GHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSD------ALKMRDEMLARGCF 464
Query: 231 SFQLT-NLLI--LVSSDM-ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+T N + L M A A+ + M + G+ P T+T L+ GY K G+MD L
Sbjct: 465 MDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNL 524
Query: 287 LAQ-----------SGSSLVNGD------------YLDIIHALAVSGHGEYIDEVSAIVC 323
+ ++L++G + D+I + H Y ++
Sbjct: 525 FEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCS 584
Query: 324 ------FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+N+C LE G+ P+ T L+ GY + GDM
Sbjct: 585 SGLLPEALNLCDQMLE------KGIRPNLVTCNTLIKGYCRSGDM 623
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L+ YL + + ++E +G++ N +TY +++ +C +G ++
Sbjct: 641 DSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNG------FCAEGKMQ 694
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
A ++L M + +++LI GH ++M A M Q GL P
Sbjct: 695 EAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 136/312 (43%), Gaps = 22/312 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN ++ ++ D ++++++GI P+ +TY + LI +C G +
Sbjct: 149 NVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITY------TTLIYGFCLLGQLM 202
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA +L+ M K ++N LI + ++ A+ +L +M++ G++P TY+ LM
Sbjct: 203 GAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLM 262
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY G++ + K ++ +S+ + + + A +L M +
Sbjct: 263 DGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMV 322
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P TY L+ G K G + S L+ + D + L + +D+ +A+
Sbjct: 323 PDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATAL 382
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDY 381
F+ M + G++P+ TYT L+ G K G + + + L LV G
Sbjct: 383 --FMK----------MKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQH---LLVKGCC 427
Query: 382 LDI-IHALAVSG 392
+D+ + + +SG
Sbjct: 428 IDVWTYTVMISG 439
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 122/278 (43%), Gaps = 40/278 (14%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F K+ +QG + + V+Y L++ C+ G A K+L + D++ + ++N
Sbjct: 102 FHDKVVAQGFQMDHVSY------GTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNT 155
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPS 219
+I G + + A + + M G+ P A TYT L+ G+ G + + + +
Sbjct: 156 IIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKN 215
Query: 220 LKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
+ P ++ N+LI ++ A+ +L +M++ G++P TY+ LM GY
Sbjct: 216 INPGVYIY--------NILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCL 267
Query: 277 HGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
G++ + +++ + Q G + Y +I+ L + +DE +N+ L
Sbjct: 268 VGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLC---KCKRVDEA------MNLLREMLH 318
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M+ P TY L+ G K G + S L+ +
Sbjct: 319 KNMV------PDTVTYNSLIDGLCKSGRITSALNLMNE 350
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 80/188 (42%), Gaps = 13/188 (6%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H G+ P D+ Y +LL N++ T K++ +GI+P TY + LI
Sbjct: 353 HRGQ---PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTY------TALID 403
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
C+ G ++ A ++ + + K I + +I G + A I + M G P
Sbjct: 404 GLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIP 463
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+A T+ ++ + + D + + + + L L F++ + + V ++ AE +L
Sbjct: 464 NAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLVL--DFKVAD--VFVQNENDKAEKLL 519
Query: 253 TMMSQAGL 260
M GL
Sbjct: 520 HEMIAKGL 527
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 10/142 (7%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D YN+L+ + S + + ++ +G + VTY + L+ C++
Sbjct: 322 VP-DTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTY------TSLLDALCKNQ 374
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N++ AT + M+++ + + ALI G + + +A+ + + G TYT
Sbjct: 375 NLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYT 434
Query: 199 KLMCGYAKHGDMD---SIKTKI 217
++ G K G D +IK+K+
Sbjct: 435 VMISGLCKEGMFDEALAIKSKM 456
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 130/308 (42%), Gaps = 33/308 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ D+ YN + N + L K+ + I PN VTY LI+ + ++G
Sbjct: 1050 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLING------FVKEG 1103
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
I A ++ M + +NALI GH D A +L M AGL + TY
Sbjct: 1104 KIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYG 1163
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G KH + K + ++ + ++ + + + + A ++ M +
Sbjct: 1164 TLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKD 1223
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSG--------SSLV-----NGDYLDI 302
G+ P TY+ L+ G+ + G++ S + ++ +SG S+L+ +G+ +
Sbjct: 1224 GVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEA 1283
Query: 303 IHALAV---SGHGEYIDEVSAIVCFVNICFHWLEGPM------MSQAGLEPSAQTYTKLM 353
+ AV +GHG D + V ++C G MS+ GL P++ TY ++
Sbjct: 1284 MKVYAVMNCNGHGA--DHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCII 1341
Query: 354 CGYAKHGD 361
GY GD
Sbjct: 1342 NGYGSIGD 1349
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 114/274 (41%), Gaps = 30/274 (10%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L ++E G P VTY + L++ YC+ G + A +++++M K +N
Sbjct: 1005 NLLKQMEENGFVPTIVTY------NTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYN 1058
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
I + A A +L M + + P+ TY L+ G+ K G I
Sbjct: 1059 VFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEG---KIGVAAQVFNEM 1115
Query: 224 SELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
S+ L + N LI D A +L M AGL + TY L+ G KH
Sbjct: 1116 SKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKF 1175
Query: 281 DSVRRLLAQSG-SSLVNGD--YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
+ +RLL + + +V G Y +I L +G +DE +V M
Sbjct: 1176 ELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNG---MLDEAVQLV------------GNM 1220
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ G+ P TY+ L+ G+ + G++ S + ++ +
Sbjct: 1221 YKDGVNPDVITYSSLINGFCRVGNIKSAKEIICR 1254
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 79/206 (38%), Gaps = 41/206 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y++L+ + + S + + ++ G+ N++ Y LI N +CQ GN+
Sbjct: 1228 DVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYN------FCQHGNVT 1281
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ M N L+ + + AE L MS+ GL P++ TY ++
Sbjct: 1282 EAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCII 1341
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY GD P + FSF M + G
Sbjct: 1342 NGYGSIGD------------PLNA----FSF-------------------FDDMIKCGQH 1366
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL 287
PS TY L+ G K G++ ++ L
Sbjct: 1367 PSFFTYGSLLKGLCKGGNLVEAKKFL 1392
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 115/290 (39%), Gaps = 22/290 (7%)
Query: 84 SHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGA 143
S ++ L+RVYL + + G +P+ T ++++ +D E
Sbjct: 915 SVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILAS------MVKDKRTELV 968
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+ M DK + G FN LI G ++ A +L M + G P+ TY L+
Sbjct: 969 WSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNW 1028
Query: 204 YAKHGDMDSIKTKIPSLKPQS-ELFLC-FSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
Y K G + I + + E +C ++ + NL + A A +L M + +
Sbjct: 1029 YCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNL--CTNHRSAKAYLLLKKMRKEMIS 1086
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P+ TY L+ G+ K G + ++ + ++ + + + + GH D A+
Sbjct: 1087 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNC--VTYNALIGGHCHVGDFEEAL 1144
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ M AGL + TY L+ G KH + +RLL +
Sbjct: 1145 RLLDH----------MEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLER 1184
>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 96/201 (47%), Gaps = 8/201 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L R Y + T + + ++ ++ + PN T S +++ YC++GN+
Sbjct: 187 DAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTC------SIIVNGYCKEGNMV 240
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A++ + M++ + VFN+LI G D + +LT+M + G+ P T++ +M
Sbjct: 241 DASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTIM 300
Query: 202 CGYAKHGDMDSIKTKIPSL-KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
++ G MD K + K + E + +F + + + + AE ILT M + G+
Sbjct: 301 NAWSSAGRMDKCKEIFNDMVKAEIEPDI-HAFSILAKGYVRAGEPEKAESILTSMRKYGV 359
Query: 261 EPSAQTYTKLMCGYAKHGDMD 281
P+ T ++ G+ G M+
Sbjct: 360 HPNVVICTTVISGWCSAGKME 380
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 122/302 (40%), Gaps = 37/302 (12%)
Query: 84 SHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGA 143
S +N L++ Y + T L L+ G++PN+ TY + L+ +C N+E A
Sbjct: 119 STFNTLIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTY------NILVRAWCNKENMEEA 172
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
++ M +N L +++ + AE ++ M + P+ +T + ++ G
Sbjct: 173 WNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNG 232
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
Y K G+M + +K L F F L + D + +LT+M + G+ P
Sbjct: 233 YCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPD 292
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG----------- 312
T++ +M ++ G MD + + + +V + IHA ++ G
Sbjct: 293 VVTFSTIMNAWSSAGRMDKCKEIF----NDMVKAEIEPDIHAFSILAKGYVRAGEPEKAE 348
Query: 313 -------EYIDEVSAIVCFVNICFHWLEGPM---------MSQAGLEPSAQTYTKLMCGY 356
+Y + ++C I G M M + G+ P+ +TY L+ GY
Sbjct: 349 SILTSMRKYGVHPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGY 408
Query: 357 AK 358
+
Sbjct: 409 GE 410
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/301 (18%), Positives = 122/301 (40%), Gaps = 44/301 (14%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
++K+E G++P+ + + +I+ + + GN++ A K+ M++ + FN
Sbjct: 70 LISKVEENGMKPDSILFNSIIN------AFSESGNMKEAMKLFRKMKESGCKPTTSTFNT 123
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
LI G+ A A +L + G++P+ +TY L+ + +M+ + +
Sbjct: 124 LIKGYGNAGKTEEALKLLEFLQDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKMVASG 183
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
++ + AE ++ M + P+ +T + ++ GY K G+M
Sbjct: 184 MQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNMVDAS 243
Query: 285 RLLAQSG-----------SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
R + + +SL+ G +LD + E +DEV
Sbjct: 244 RFVFRMKELGVLPNLFVFNSLIKG-FLDTMDT-------EGVDEVLT------------- 282
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
+M + G+ P T++ +M ++ G MD + + + +V + IHA ++
Sbjct: 283 --LMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIF----NDMVKAEIEPDIHAFSILAK 336
Query: 394 G 394
G
Sbjct: 337 G 337
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 53 WCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ 112
+C E GN+ F EL V ++ +N+L++ +LD T + L +E
Sbjct: 233 YCKE-----GNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEEN 287
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G+ P+ VT+ S +++ + G ++ +I M F+ L G+ +A
Sbjct: 288 GVRPDVVTF------STIMNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRA 341
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 211
+ AE ILT M + G+ P+ T ++ G+ G M+
Sbjct: 342 GEPEKAESILTSMRKYGVHPNVVICTTVISGWCSAGKME 380
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 43 VLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSP 102
V+ F + + W S + C++ F+ + ++ DI ++ L + Y+
Sbjct: 293 VVTFSTIMNAWSSAGRMDK----CKEIFNDMV-KAEIEPDIHAFSILAKGYVRAGEPEKA 347
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
L + G+ PN V + +IS +C G +E A K+ E M + + +
Sbjct: 348 ESILTSMRKYGVHPNVVIC------TTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTY 401
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
LI+G+ +A AE +L +M + G+ P T
Sbjct: 402 ETLIWGYGEAKQPLKAEELLQVMEEKGVFPKKGT 435
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 113/286 (39%), Gaps = 26/286 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI Y ++ Y +F+ ++E EPN VTY LI Y G++
Sbjct: 255 DIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDG------YVSLGDVC 308
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA K+L M +K P + + LI G+ + M AE ++ M + L Y L+
Sbjct: 309 GAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLI 368
Query: 202 CGYAKHGDM-DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
Y G + D+++ + LK ++ L N + +AE +L M L
Sbjct: 369 HAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAE-VLVSMKDWNL 427
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
+P + Y L+ G+ K D +L + G + Y ++ L GH E+
Sbjct: 428 KPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALH 487
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+ W +M + G+ P+ TY L+ + K G D
Sbjct: 488 I------------W---NLMHKRGVAPNEVTYCTLLDAFFKVGTFD 518
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 160/402 (39%), Gaps = 64/402 (15%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I+ YN ++ + E + K++ G P+ +TY+ LI YC+ GN+
Sbjct: 536 ITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDG------YCKVGNLVE 589
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A K+ + S ++N+LI G ++ ++ G+L M L P+ TY L+
Sbjct: 590 ALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIA 649
Query: 203 GYAKHGDMDSI---------KTKIPSL----KPQSELFLCFSFQLTNLLI---------- 239
G+ G MD K P++ K S L+ NL++
Sbjct: 650 GWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIA 709
Query: 240 -------LVSSDMASAE--GILTMMSQAGLE-PSAQ--TYTKLMCGYAKHGDMDSVRRLL 287
L SD+ E I+ + + P + Y + G K ++D VRR+L
Sbjct: 710 AHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRIL 769
Query: 288 AQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
+ G N Y +IHA + G +V+ C + M AGL P
Sbjct: 770 SDLLLKGFCPDNYTYCSLIHACSAVG------KVNEAFCLRDD---------MINAGLVP 814
Query: 345 SAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEII 401
+ Y L+ G K G++D RRL LA+ G S Y +I G E+
Sbjct: 815 NIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELK 874
Query: 402 SKI-QPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLARSA 441
K+ + G+ S+ + + H L +G+ + + ++N + ++
Sbjct: 875 DKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 157/423 (37%), Gaps = 71/423 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-------------- 127
++ YN+L+ Y+ LA + +GI N TY LI
Sbjct: 290 NVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLI 349
Query: 128 ---------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
LI YC G ++ A +I + M ++ + N+LI G+ +
Sbjct: 350 GCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKL 409
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+ A +L M L+P + Y L+ G+ K D + + F ++
Sbjct: 410 GHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTY 469
Query: 233 Q--LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
L NL + + A I +M + G+ P+ TY L+ + K G D R +
Sbjct: 470 NTLLKNLFHV--GHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFD---RAMMIW 524
Query: 291 GSSLVNGDYLDI-IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY 349
+L G I ++ + G + V A F+ M + G P TY
Sbjct: 525 KDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLK----------MKELGFPPDEITY 574
Query: 350 TKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ- 405
L+ GY K G++ ++ + ++G S Y +I + S + ++ ++++++
Sbjct: 575 RTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKN 634
Query: 406 ----PGV-------------GYSADAANHIYHLINKG---QIDAAYRIVNTLARSANING 445
P V G A N + +I+KG I +IV++L R I+
Sbjct: 635 RELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDE 694
Query: 446 EQL 448
L
Sbjct: 695 ANL 697
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 88/247 (35%), Gaps = 56/247 (22%)
Query: 153 KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 212
+ F S VF+ ++ ++ A + M + G PS ++ L+ ++G+
Sbjct: 180 REFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFK 239
Query: 213 IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
+ L FS+ + + A + M ++ EP+ TY L+
Sbjct: 240 ALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLID 299
Query: 273 GYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWL 332
GY GD+ +++LA
Sbjct: 300 GYVSLGDVCGAKKVLA-------------------------------------------- 315
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLD------IIH 386
+MS+ G+ +++TYT L+ GY K G M+ +L+ G + ++D +IH
Sbjct: 316 ---LMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLI---GCMMEKNLFVDEHVYGVLIH 369
Query: 387 ALAVSGH 393
A +G
Sbjct: 370 AYCTAGR 376
>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Glycine max]
Length = 777
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 44/268 (16%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ LAKL G+ P++++Y + L++ YCQ+G+++ A E M ++ + FN
Sbjct: 346 EVLAKLVENGVTPSKISY------NILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFN 399
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG----------DMDSI 213
+I + ++ AE + M + G+ P+ +TY L+ GY + G +MD
Sbjct: 400 TVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKA 459
Query: 214 KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM-- 271
K P++ L C + + AE +L M G+ P+A+ Y L+
Sbjct: 460 GIK-PNVISYGSLINC---------LCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509
Query: 272 -CGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFH 330
C +K D + QSG Y +I+ L +G + +++
Sbjct: 510 SCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDL------------ 557
Query: 331 WLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+L+ M+ G P TY L+ GYAK
Sbjct: 558 FLQ---MAGKGCNPDVITYNSLISGYAK 582
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 112/321 (34%), Gaps = 64/321 (19%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS---------------- 126
+ YN+L+ Y H +FL +++ GI+PN ++Y LI+
Sbjct: 430 VETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLA 489
Query: 127 ---------NSK----LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
N++ LI C ++ A + + M + +N LI G +
Sbjct: 490 DMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNG 549
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFL 228
+ AE + M+ G P TY L+ GYAK + K KI +KP F
Sbjct: 550 RVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFH 609
Query: 229 CFSFQLTNLLILVSSDMASAEGILTM------MSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+ EG++TM M Q L P Y +++ YA+ G++
Sbjct: 610 PLIYA------------CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMK 657
Query: 283 VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
L Q V+ D + + + E+ +V M GL
Sbjct: 658 AMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLV------------DDMKAKGL 705
Query: 343 EPSAQTYTKLMCGYAKHGDMD 363
P TY L+ G D +
Sbjct: 706 VPKVDTYNILIKGLCDLKDFN 726
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 91/455 (20%), Positives = 173/455 (38%), Gaps = 67/455 (14%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N LLR +D+ H A + G P+ V Y + + + ++ +++ ++
Sbjct: 126 NRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLK------DLDKGFEL 179
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
++ M S +N ++ G + + A + M Q + P+ TY L+ GY K
Sbjct: 180 MKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCK 239
Query: 207 HGDMD---SIKTKIPSLKPQSELF--------LCFSFQLTN-----------------LL 238
G ++ K ++ + L LC S ++ + L
Sbjct: 240 VGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFL 299
Query: 239 ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD 298
V D ++ G + + +TY L+ G + G ++ +LA+ + V
Sbjct: 300 SFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPS 359
Query: 299 YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
I + + V+ + + D AI L M + GLEP+ T+ ++ + +
Sbjct: 360 --KISYNILVNAYCQEGDVKKAI----------LTTEQMEERGLEPNRITFNTVISKFCE 407
Query: 359 HGDMDS----IRRLLAQNGSSLVNGDYLDIIHALAVSGH----GEYIDEI-ISKIQPGVG 409
G++D +RR++ + S V Y +I+ GH E++DE+ + I+P V
Sbjct: 408 TGEVDHAETWVRRMVEKGVSPTVE-TYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVI 466
Query: 410 YSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYS 469
N + ++ IDA + + + R + N E + +M+ +
Sbjct: 467 SYGSLINCLCK--DRKLIDAEIVLADMIGRGVSPNAE--------IYNMLIEASCSLSKL 516
Query: 470 ADAANHIYHLINKGQIDAAYRIVNTLARSANINGE 504
DA +I G IDA NTL NG
Sbjct: 517 KDAFRFFDEMIQSG-IDATLVTYNTLINGLGRNGR 550
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 8/157 (5%)
Query: 67 EDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS 126
ED F G+ P D+ YN+L+ Y + +T + K++ GI+P T+ LI
Sbjct: 555 EDLFLQMAGKGCNP-DVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIY 613
Query: 127 NSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMS 186
C+ + K+ + M + V+N +IY +++ ++ A + M
Sbjct: 614 A-------CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMV 666
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
G++ TY L+ Y + + IK + +K +
Sbjct: 667 DQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAK 703
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 117/309 (37%), Gaps = 75/309 (24%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y ALL YL ++ + D ++ PN +TY S LI C+ G I+
Sbjct: 521 NVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITY------SALIDGLCKAGEIQ 574
Query: 142 GATKI--------------LEFMRDKTFPISEGV--FNALIYGHSQANDMASAEGILTMM 185
A ++ F T IS V + AL+ G +A ++ A +L M
Sbjct: 575 KACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAM 634
Query: 186 SQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM 245
AG EP+ Y L+ G+ K G++D
Sbjct: 635 LAAGCEPNQIVYDALVDGFCKVGEID---------------------------------- 660
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDI 302
SA+ + M++ G PS TYT L+ K G +D ++L+Q N + Y +
Sbjct: 661 -SAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAM 719
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ L +G E + + +M + G P+ TYT L+ G K G +
Sbjct: 720 VDGLCKTGETEKALNLLS---------------LMEKKGCSPNVVTYTALIDGLGKAGKV 764
Query: 363 DSIRRLLAQ 371
D+ L Q
Sbjct: 765 DAGLELFMQ 773
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 113/288 (39%), Gaps = 53/288 (18%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
G + D YN L+ N + L K+ + I PN +TY +I+ +
Sbjct: 230 GSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIING------F 283
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
++G I AT+I + M + +NALI GH + A IL MM G +P+
Sbjct: 284 VKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNE 343
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
+Y+ L+ G +H + K+ + ++ + C ++ + + + + +L
Sbjct: 344 VSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDK 403
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
M + G+ P T++ L+ G+ + G + +V+ ++ +
Sbjct: 404 MLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICK------------------------- 438
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
M +AGL P++ YT L+ Y K GD+
Sbjct: 439 ----------------------MYKAGLAPNSIIYTTLIYNYCKTGDV 464
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y A++ N L K+ G+ P+ VT+ S LI+ +C+ G I+ +
Sbjct: 381 YTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTF------SVLINGFCRVGKIKNVKE 434
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I+ M + ++ LIY + + D+ A + MS+ G + + L+
Sbjct: 435 IICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLC 494
Query: 206 KHGDMDSIK------TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
K G + + +KI ++ P S F C N S + A + M +AG
Sbjct: 495 KDGKVGVAEYFFHHMSKIGNV-PNSITFDCIINGYGN-----SGNGLKAFSMFDEMIKAG 548
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
PS TY L+ + G +RLL
Sbjct: 549 HHPSHFTYGGLLKALCRAGKFKEAKRLL 576
Score = 47.0 bits (110), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ +G P+R +Q I+ L+++ C+ G+I GA K+ + M + +A
Sbjct: 857 LLHEMLERGCIPDR---RQYIA---LVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESA 910
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
L+ G ++ + A+ +L M + L P+ T+T LM + ++ ++ + +LK +
Sbjct: 911 LVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRN------ESLVEALKLKD 964
Query: 225 ELFLC---FSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+ C N+LI D+ASA + + Q GL P+ TY L+
Sbjct: 965 TMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILI 1017
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 67/344 (19%), Positives = 118/344 (34%), Gaps = 55/344 (15%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN----------- 127
VP D+ ++ L+ + + + + K+ G+ PN + Y LI N
Sbjct: 410 VP-DVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAF 468
Query: 128 ------------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
+ L+S C+DG + A M + F+ +I G+
Sbjct: 469 KVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGY 528
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC 229
+ + A + M +AG PS TY L+ + G K + L
Sbjct: 529 GNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDT 588
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR----R 285
++ + S + A + M Q + P + TY + G + G M +
Sbjct: 589 VTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGN 648
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGE---YIDE------VSAIVCFVNICFH-WLEGP 335
LL + S Y + L +G + Y E + A + N+ + +
Sbjct: 649 LLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMG 708
Query: 336 MMSQAG-----------LEPSAQTYTKLMCGYAKHGDMDSIRRL 368
M++AG + PS TY L+ GYAK ++ L
Sbjct: 709 KMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNL 752
>gi|326511196|dbj|BAJ87612.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 725
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 126/325 (38%), Gaps = 59/325 (18%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK 129
F G+ +P + S YN ++ VY A+++ +G++P +VTY +
Sbjct: 365 FQSEMGKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTY------NI 418
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA-SAEGILTMMSQA 188
L+ Y + E +L M D F + +N LI + + M+ AE M +
Sbjct: 419 LMDAYSRRLQPEVVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKG 478
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASA 248
G++ ++ +YT L+C YA G + K I L
Sbjct: 479 GIKATSSSYTSLICAYAVSGQYE--KAHIAYLD--------------------------- 509
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-A 307
M + GL+PS +TYT L+ + + G+ + + V + L
Sbjct: 510 ------MKREGLKPSLETYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDG 563
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
++ HG ++ I F I GL P+A TY LM YAK G + +
Sbjct: 564 LAKHGLFVQARDVICEFGKI-------------GLPPTAMTYNILMNAYAKGGQHYKLPQ 610
Query: 368 LLAQNGSSLVNGD---YLDIIHALA 389
LL + + + D Y +I+A A
Sbjct: 611 LLKEMSTLELKPDSVTYSTLIYAYA 635
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 110/266 (41%), Gaps = 62/266 (23%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F ++ +G++ L ++ LI +C +G + A M + P + ++N
Sbjct: 330 FFQRMNRKGVK------WSLGVSASLIKIFCDEGMKKEALIFQSEMGKRGIPSNTSIYNT 383
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
++ + + + + AEG+ M + GL+P+ TY LM Y++ L+P+
Sbjct: 384 IMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRR------------LQPE- 430
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM---- 280
E +L M G +P+A++Y L+ Y + M
Sbjct: 431 ----------------------VVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKA 468
Query: 281 -DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
D+ R + + G + Y +I A AVSG E A + +++ M +
Sbjct: 469 EDAFLR-MKKGGIKATSSSYTSLICAYAVSGQYE-----KAHIAYLD----------MKR 512
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSI 365
GL+PS +TYT L+ + + G+ + +
Sbjct: 513 EGLKPSLETYTALLDIFRRAGNTEKL 538
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 86/221 (38%), Gaps = 44/221 (19%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
++ +G++P+ TY + L+ + + GN E + + M D+ + F+ ++ G
Sbjct: 510 MKREGLKPSLETY------TALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDG 563
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
++ A ++ + GL P+A TY LM YAK G K+P L
Sbjct: 564 LAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQ----HYKLPQL-------- 611
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV---RR 285
L MS L+P + TY+ L+ YA+ D +
Sbjct: 612 -----------------------LKEMSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHK 648
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVN 326
+ ++G Y +++ L V E I + SAI V
Sbjct: 649 QMVRNGQVPDAKSYRKLLNTLDVKSARENIKDKSAIAGVVK 689
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 119/290 (41%), Gaps = 26/290 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +++ ++ D LE +G+ PN V Y + LI YC+ G ++ A
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY------TALIDGYCKAGKVDEAHL 553
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+LE M K + FNALI+G + A + M + GL+P+ T T L+
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 206 KHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
K GD D ++ + KP + + F + AE ++ M + G+
Sbjct: 614 KDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCR-----EGRLLDAEDMMAKMRENGV 668
Query: 261 EPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
P TY+ L+ GY G + V + + +G +L +I L +G+
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728
Query: 318 VSAIVCFVNI-----CFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ N+ LE M + + P+A++Y KL+ G + G++
Sbjct: 729 EPELCAMSNMMEFDTVVELLEK--MVEHSVTPNAKSYEKLILGICEVGNL 776
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 180/440 (40%), Gaps = 66/440 (15%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN ++ Y + +++K+ G++P+ TY + LI YCQ +++
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTY------TSLIMGYCQRKDLD 270
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT--- 198
A K+ M K +E + LI+G A + A + M P+ +TYT
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 199 KLMCGYAKHGDMDSIKTKIPS--LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
K +CG + + ++ ++ +KP + L + A +L M
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS-----QCKFEKARELLGQML 385
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDM-DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
+ GL P+ TY L+ GY K G + D+V D ++++ + +S +
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAV--------------DVVELMESRKLSPNTRTY 431
Query: 316 DEVSAIVCFVNICFHWLEGPM--MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA-QN 372
+E+ C N+ H G + M + + P TY L+ G + G+ DS RLL+ N
Sbjct: 432 NELIKGYCKSNV--HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 373 GSSLV--NGDYLDIIHALAVSGHGEYIDEIISKI-QPGVG-----YSADAANHIYHLINK 424
LV Y +I +L S E ++ + Q GV Y+A I
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTA----LIDGYCKA 545
Query: 425 GQIDAAYRIV----------NTLARSANING----EQLPVGGFLVRHMVKTN-QPGVGYS 469
G++D A+ ++ N+L +A I+G +L L MVK QP V S
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV--S 603
Query: 470 ADAANHIYHLINKGQIDAAY 489
D I+ L+ G D AY
Sbjct: 604 TDTI-LIHRLLKDGDFDHAY 622
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 125/345 (36%), Gaps = 51/345 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------ 127
YNAL+ Y D + +ES+ + PN TY +LI
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLE 455
Query: 128 ----------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS 177
+ LI C+ GN + A ++L M D+ + + ++I ++ +
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
A + + Q G+ P+ YT L+ GY K G +D + + ++ L +F
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575
Query: 238 LILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG 297
+ + A + M + GL+P+ T T L+ K GD D Q SS
Sbjct: 576 GLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP 635
Query: 298 D---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMC 354
D Y I G +++ A M + G+ P TY+ L+
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMA---------------KMRENGVSPDLFTYSSLIK 680
Query: 355 GYAKHGD----MDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGE 395
GY G D ++R + G +L +I L +G+
Sbjct: 681 GYGDLGQTNFAFDVLKR-MRDTGCEPSQHTFLSLIKHLLEMKYGK 724
Score = 46.2 bits (108), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 117/299 (39%), Gaps = 49/299 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y ++ Y D +AK+ G+ P+ TY S LI Y G
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY------SSLIKGYGDLGQTN 689
Query: 142 GATKILEFMRDKTFPISEGVFNALI-------YGHSQAN-----------DMASAEGILT 183
A +L+ MRD S+ F +LI YG + + + + +L
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLE 749
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF----LCFSFQLTNLLI 239
M + + P+A++Y KL+ G + G++ + K+ ++E L F+ L+
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNL-RVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 240 LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVN 296
L + A+ ++ M G P ++ L+CG K G+ + SV + L Q G
Sbjct: 809 LKKHNEAAK--VVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDE 866
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCG 355
+ II + G E E+ + M + G + S+QTY+ L+ G
Sbjct: 867 LAWKIIIDGVGKQGLVEAFYELFNV---------------MEKNGCKFSSQTYSLLIEG 910
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 133/308 (43%), Gaps = 47/308 (15%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 124 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 183
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 184 RLKSAMLASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLVKGLIPNGVTFTTLI 240
Query: 272 CGYAKHGDMDSV----RRLLAQS-GSSLVNGDYLDIIHALAVSGH----GEYIDEVSAIV 322
G K+G +D +R+L+QS L+ Y +I+ L G + IDE
Sbjct: 241 DGRCKNGRVDLAMEIYKRMLSQSLLPDLIT--YNTLIYGLCKKGDLKQAHDLIDE----- 293
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNG 379
MS GL+P TYT L+ G K GD+D+ R+ + Q L +
Sbjct: 294 --------------MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDV 339
Query: 380 DYLDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIV 434
Y +I L G + + E++S ++P G N KG + +++
Sbjct: 340 AYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIIN---EFCKKGDVWKGSKLL 396
Query: 435 NTLARSAN 442
+ R +
Sbjct: 397 KEMQRDGH 404
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ LI C++G ++
Sbjct: 197 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGR------CKNGRVD 250
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 251 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 310
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE +L M L+
Sbjct: 311 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLK 370
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ + K GD+ +LL +
Sbjct: 371 PDTGTYTMIINEFCKKGDVWKGSKLLKE 398
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 122/305 (40%), Gaps = 36/305 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + + G+ P+ V+Y L++ Y
Sbjct: 121 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNG------YI 174
Query: 136 QDGNIEGATKILEFMRDKTFPISEGV------FNALIYGHSQANDMASAEGILTMMSQAG 189
+ G+++ E R K+ ++ GV ++ LI G + + M A + M G
Sbjct: 175 RLGDLD------EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 228
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
L P+ T+T L+ G K+G +D + QS L ++ + D+ A
Sbjct: 229 LIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 288
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHAL 306
++ MS GL+P TYT L+ G K GD+D+ R+ + Q L + Y +I L
Sbjct: 289 DLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 348
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G +D + M L+P TYT ++ + K GD+
Sbjct: 349 CQEGRS--VDAEKML-------------REMLSVDLKPDTGTYTMIINEFCKKGDVWKGS 393
Query: 367 RLLAQ 371
+LL +
Sbjct: 394 KLLKE 398
>gi|357138821|ref|XP_003570985.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Brachypodium distachyon]
Length = 613
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 20/276 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y ++ VY ++ S +++S G + N TY + L++ + ++G E A +
Sbjct: 295 YTLMINVYGKSKQPMSAMKIFNEMQSIGCKANICTY------TALVNAFAREGLCEKAEE 348
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M+ +NAL+ +S+A A I ++M G EP +Y L+ Y
Sbjct: 349 VFEQMQQAGHEPDVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASYNILVDAYG 408
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G + SLK Q S L S ++ E ++ + ++GL P
Sbjct: 409 RAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTF 468
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
++ YA+ G +D + RLLA +GS+ V G + ++A A +G Y+ + A
Sbjct: 469 ALNAMLHAYARAGRLDDMERLLAAMDLAGSADV-GSHNVAVNAYARAG---YLGRMEA-- 522
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
F + + G++ ++T M GYA+
Sbjct: 523 -----AFEGIRRRKGKKGGIDADVVSWTSRMGGYAR 553
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 140/344 (40%), Gaps = 33/344 (9%)
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
+I + LI Y + + A I + + +E + L+ + A + AEG+++
Sbjct: 187 IICYNLLIDAYGRKRQLNKAESIYAAVLEAQCVPTEDTYALLLRAYCNARSLHRAEGVIS 246
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL--- 240
M + G+ PSA Y + G K K + + + C + T L++
Sbjct: 247 EMQEHGIPPSATVYNAYLDGLLK----ARCTVKAVEVYQRMKKERCRTNTETYTLMINVY 302
Query: 241 -VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVN 296
S SA I M G + + TYT L+ +A+ G + V + Q+G
Sbjct: 303 GKSKQPMSAMKIFNEMQSIGCKANICTYTALVNAFAREGLCEKAEEVFEQMQQAGHEPDV 362
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY 356
Y ++ A + +G + E+ ++ M G EP +Y L+ Y
Sbjct: 363 YAYNALMEAYSRAGFPQGASEIFSL---------------MQHMGCEPDRASYNILVDAY 407
Query: 357 AK---HGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI-QPGVGYSA 412
+ H + ++ L Q G + ++ ++ A A SG+ +++++++ + G+
Sbjct: 408 GRAGLHREAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDT 467
Query: 413 DAANHIYHLINK-GQIDAAYRIVNT--LARSANINGEQLPVGGF 453
A N + H + G++D R++ LA SA++ + V +
Sbjct: 468 FALNAMLHAYARAGRLDDMERLLAAMDLAGSADVGSHNVAVNAY 511
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/139 (18%), Positives = 62/139 (44%), Gaps = 6/139 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YNAL+ Y ++ + ++ G EP+R +Y + L+ Y + G
Sbjct: 361 DVYAYNALMEAYSRAGFPQGASEIFSLMQHMGCEPDRASY------NILVDAYGRAGLHR 414
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A E ++ + + L+ H+++ ++ E ++ + ++GL P ++
Sbjct: 415 EAEATFESLKQQGMAPTMKSHMLLLSAHARSGNVGRCEQVMAQLHKSGLRPDTFALNAML 474
Query: 202 CGYAKHGDMDSIKTKIPSL 220
YA+ G +D ++ + ++
Sbjct: 475 HAYARAGRLDDMERLLAAM 493
>gi|449445409|ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
gi|449518107|ref|XP_004166085.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Cucumis sativus]
Length = 578
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 12/212 (5%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
L ++ YN++LR + L ++ + +EP+ VT + LI+ YC+ G++
Sbjct: 326 LGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVT------CNTLINAYCKIGDM 379
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A K+ M D + + ALI+G DM SA+ +L M GL P TY+ L
Sbjct: 380 KSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMESAKELLFCMLDVGLSPGYCTYSWL 439
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQ 257
+ GY + G+ +I + + + C + LI + AE I + M
Sbjct: 440 VDGYCELGNEGAIISLLDEFLTKG---YCVDLSVCRALIRRLCHQERVGFAEKIYSTMHL 496
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
G+ + YT L Y K G + V +L++
Sbjct: 497 RGVSGDSVIYTSLAYAYWKDGKSNLVSEMLSE 528
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 33/238 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI---------------- 125
D+ YN L+ +Y + ++E G+ P+ VTY LI
Sbjct: 224 DLYTYNTLISLYSRKSLHYEALCVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLF 283
Query: 126 -----------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAND 174
+ + LI YC+ + E A ++ + M K + +N+++ +
Sbjct: 284 REIKDVSPNHVTYTTLIDGYCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGR 343
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-IKTKIPSLKPQSELFLCFSFQ 233
+ A +L M + +EP T L+ Y K GDM S +K K L +L SF
Sbjct: 344 IRDANKLLNEMGERKVEPDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQL---DSFT 400
Query: 234 LTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+ DM SA+ +L M GL P TY+ L+ GY + G+ ++ LL +
Sbjct: 401 YKALIHGFCWVRDMESAKELLFCMLDVGLSPGYCTYSWLVDGYCELGNEGAIISLLDE 458
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 120/300 (40%), Gaps = 57/300 (19%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K+ G+ PN Y LI C+ G++E A +++ M K+ +N LI
Sbjct: 180 KMIRVGVVPNIHIYNVLIHAC------CKSGDVEKAEQLVCEMELKSVFPDLYTYNTLIS 233
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIK--TKIPSLKP-- 222
+S+ + A + M +AG+ P TY L+ G+ K G M +++K +I + P
Sbjct: 234 LYSRKSLHYEALCVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREIKDVSPNH 293
Query: 223 ----------------QSELFLCFSFQLTNLLILVSS------------DMASAEGILTM 254
+ L LC + L + V++ + A +L
Sbjct: 294 VTYTTLIDGYCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNE 353
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
M + +EP T L+ Y K GDM S V+ + +G L + Y +IH
Sbjct: 354 MGERKVEPDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRD 413
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
E E+ + C +++ GL P TY+ L+ GY + G+ +I LL +
Sbjct: 414 MESAKEL--LFCMLDV-------------GLSPGYCTYSWLVDGYCELGNEGAIISLLDE 458
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 38/241 (15%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS------------ 126
VP +I YN L+ + + ++E + + P+ TY LIS
Sbjct: 187 VP-NIHIYNVLIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEAL 245
Query: 127 -----------------NSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
+ LI +C++G + A K+ ++D + P + + LI G+
Sbjct: 246 CVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREIKDVS-P-NHVTYTTLIDGY 303
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSIKTKIPSLKPQSEL 226
+ ND A + +M GL TY + +C + D + + ++ K + +
Sbjct: 304 CRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVEPDN 363
Query: 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
C + L N + DM SA + + M AGL+ + TY L+ G+ DM+S + L
Sbjct: 364 VTCNT--LINAYCKI-GDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMESAKEL 420
Query: 287 L 287
L
Sbjct: 421 L 421
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 84/220 (38%), Gaps = 28/220 (12%)
Query: 56 EPSLGPGNLPC-------------EDPFSVHTGELD--VPLDISHYNALLRVYLDNEHTF 100
E + P N+ C + V + LD + LD Y AL+ +
Sbjct: 356 ERKVEPDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDME 415
Query: 101 SPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEG 160
S + L + G+ P TY S L+ YC+ GN +L+ K + +
Sbjct: 416 SAKELLFCMLDVGLSPGYCTY------SWLVDGYCELGNEGAIISLLDEFLTKGYCVDLS 469
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
V ALI + AE I + M G+ + YT L Y K G + + + +
Sbjct: 470 VCRALIRRLCHQERVGFAEKIYSTMHLRGVSGDSVIYTSLAYAYWKDGKSNLVSEMLSEM 529
Query: 221 KPQS-----ELFLCF--SFQLTNLLILVSSDMASAEGILT 253
+S +L+ CF S+ N ++ + D + G+L+
Sbjct: 530 TKRSLLINLKLYRCFNASYGPHNSILHLFWDHVAERGLLS 569
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 154/350 (44%), Gaps = 34/350 (9%)
Query: 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGIL 182
+ + + L+S C++G + AT + + M DK ++ +N++I GH + ++ A +
Sbjct: 452 NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVF 511
Query: 183 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
+ M GL+P+ TY+ LM GY K+GD + + ++ + F++ + +
Sbjct: 512 SDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKV 571
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSG-------- 291
+ A+ +L + G P TY +M G+ K G + S R + +SG
Sbjct: 572 GRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITY 631
Query: 292 SSLVNGDYLDIIHALAVSGHGEYID-----EVSAIVCFVN-ICFH-------WLEGPMMS 338
++L+NG + LA+ E + +++A ++ C WL ++
Sbjct: 632 TTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELL- 690
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSI----RRLLAQNGSSLVNGDYLDIIHALAVSGHG 394
GL P++ Y L+ GY +M++ +R+L + G S Y +I L G
Sbjct: 691 DGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGE-GISCDLQTYTTLIDGLLKEGRL 749
Query: 395 EYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSA 441
++ S++ G D + I L KGQ++ A +I+ + R +
Sbjct: 750 VLALDLYSEMSAK-GIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDS 798
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 145/327 (44%), Gaps = 33/327 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP+ ++ YN+++ ++ S ++ G+ PN +TY + LI+ +C++
Sbjct: 590 VPVCLT-YNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITY------TTLINGFCKNN 642
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N + A K+ MR+K + + ALI G + D+ +A + + + GL P++ Y
Sbjct: 643 NTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYN 702
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELF---LCFSFQLTNLLI---LVSSDMASAEGIL 252
L+ GY +M++ +L Q + + Q LI L + A +
Sbjct: 703 SLISGYRNLNNMEA------ALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLY 756
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
+ MS G+ P YT L+ G G +++ +++LA+ + + + I +AL ++GH
Sbjct: 757 SEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPN-VPIYNAL-IAGHF 814
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD--MDSIRRLLA 370
+ + A L M+ + GL P+ TY L+ G K G+ + S+ L
Sbjct: 815 KAGNLQEAFR---------LHNEMLDK-GLTPNDTTYDILINGKIKGGNSALKSLLSLKF 864
Query: 371 QNGSSLVNGDYLDIIHALAVSGHGEYI 397
++G + + D I + +Y+
Sbjct: 865 KDGKGMKRINEQDSIKKVIEKAVNKYL 891
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 157/399 (39%), Gaps = 41/399 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V +++ L++ Y + S +F K+ G PNRVTY + LI C++G
Sbjct: 345 VQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTY------AVLIEWCCKNG 398
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A + M++K + + N+LI G + A + + + TY
Sbjct: 399 NMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYN 457
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ K G M T + + S+ L ++ A + + M
Sbjct: 458 SLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDC 517
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS-GSSLVNGDY---LDIIHALAVSGHGEY 314
GL+P+ TY+ LM GY K+GD + + + ++V D+ + I V E
Sbjct: 518 GLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEA 577
Query: 315 IDEVSAIV--CFVNICFHW--------LEGPM---------MSQAGLEPSAQTYTKLMCG 355
D + V FV +C + EG + M ++G+ P+ TYT L+ G
Sbjct: 578 QDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLING 637
Query: 356 YAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSA 412
+ K+ + D +R + G L Y +I E + S++ G G S
Sbjct: 638 FCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDG-GLSP 696
Query: 413 DAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVG 451
++ IY+ + G YR +N + + N+ L G
Sbjct: 697 NSV--IYNSLISG-----YRNLNNMEAALNLQKRMLGEG 728
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 113/299 (37%), Gaps = 67/299 (22%)
Query: 89 LLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILE 148
++R L + + F + +S+G++ + Y S +I +C++ ++E A +L+
Sbjct: 250 MMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAY------SIVIQAFCKNLDVELACGLLK 303
Query: 149 FMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 208
MRDK + SEG F ++I + +M A + M G++ + T L+ GY K
Sbjct: 304 DMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQ- 362
Query: 209 DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYT 268
+ SA M++ G P+ TY
Sbjct: 363 ----------------------------------DKLVSALEFFDKMNENGPSPNRVTYA 388
Query: 269 KLMCGYAKHGDMDSVRRLLAQSGSS-------LVNGDYLDIIHALAVSGHGEYIDEVSAI 321
L+ K+G+M L Q + +VN + + + DE A+
Sbjct: 389 VLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDE--AV 446
Query: 322 VCFV------NICFHWL--EGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMD 363
C + N WL EG M M GL P+ +Y ++ G+ + G++D
Sbjct: 447 ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLD 505
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 112/286 (39%), Gaps = 26/286 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI Y ++ Y +F+ ++E EPN VTY LI Y G++
Sbjct: 255 DIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDG------YVSLGDVC 308
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA K+L M +K P + + LI G+ + M AE + M + L Y L+
Sbjct: 309 GAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLI 368
Query: 202 CGYAKHGDM-DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
Y G + D+++ + LK ++ L N + +AE +L M L
Sbjct: 369 HAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAE-VLVSMKDWNL 427
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
+P + Y L+ G+ K D +L + G + Y ++ L GH E+
Sbjct: 428 KPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALH 487
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+ W +M + G+ P+ TY L+ + K G D
Sbjct: 488 I------------W---NLMHKRGVAPNEVTYCTLLDAFFKVGTFD 518
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 46/247 (18%), Positives = 88/247 (35%), Gaps = 56/247 (22%)
Query: 153 KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 212
+ F S VF+ ++ +++ A + M + G PS ++ L+ ++G+
Sbjct: 180 REFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFK 239
Query: 213 IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
+ L FS+ + + A + M ++ EP+ TY L+
Sbjct: 240 ALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLID 299
Query: 273 GYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWL 332
GY GD+ +++LA
Sbjct: 300 GYVSLGDVCGAKKVLA-------------------------------------------- 315
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLD------IIH 386
+MS+ G+ +++TYT L+ GY K G M+ +L G + ++D +IH
Sbjct: 316 ---LMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLF---GCMMEKNLFVDEHVYGVLIH 369
Query: 387 ALAVSGH 393
A +G
Sbjct: 370 AYCTAGR 376
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 130/328 (39%), Gaps = 32/328 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ L+R + + L ++ G EP+ + L+ C++G+++ A
Sbjct: 180 FIVLMRRFASVRMVKKAVEVLDEMPKYGCEPDEYVF------GCLLDALCKNGSVKEAAS 233
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E MR + P + F +L+YG + + A+ +L + +AG EP Y L+ GYA
Sbjct: 234 LFEDMRVRFNP-NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYA 292
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G M + +K + SF + + M A I T M +G E
Sbjct: 293 QAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVV 352
Query: 266 TYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TYT L+ G+ K G+ D +L Q G YL I+ A E ++E
Sbjct: 353 TYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMA---HEKKEELEE----- 404
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN---G 379
C +E M + G P Y ++ K GD+ RL + + +N
Sbjct: 405 -----CMELIEE--MRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLD 457
Query: 380 DYLDIIHALAVSG----HGEYIDEIISK 403
Y+ ++H G +Y E++ +
Sbjct: 458 TYILMVHGFLSQGCLVEACDYFKEMVER 485
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 121/324 (37%), Gaps = 37/324 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ H+ +LL + L +++ G EP+ V Y L+ Y Q G +
Sbjct: 245 NLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGG------YAQAGKMR 298
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L M+ + F LI + M A I T M +G E TYT L+
Sbjct: 299 DAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLI 358
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS----SDMASAEGILTMMSQ 257
G+ K G+ D + + + QL+ L I+++ ++ ++ M +
Sbjct: 359 SGFCKWGNTDKAYEILDDMIQKGH----DPSQLSYLCIMMAHEKKEELEECMELIEEMRK 414
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN---GDYLDIIHALAVSGHGEY 314
G P Y ++ K GD+ RL + + +N Y+ ++H G
Sbjct: 415 IGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQG---- 470
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGL--EPSAQTYTKLMCGYAKHGDMDSIRRL---L 369
C V C ++ E M + GL P T +L + ++ + + +
Sbjct: 471 --------CLVEACDYFKE---MVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCM 519
Query: 370 AQNGSSLVNGDYLDIIHALAVSGH 393
G L + IHAL +GH
Sbjct: 520 TTKGCELNVSAWTIWIHALFSNGH 543
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 95/465 (20%), Positives = 176/465 (37%), Gaps = 61/465 (13%)
Query: 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS 177
R +Y+ + K + K Q G + I E ++ + ++ VF L+ + +
Sbjct: 138 RHSYEVYKAMIKTLGKMRQFGAVWAL--IEEMRKENPYMLTPEVFIVLMRRFASVRMVKK 195
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
A +L M + G EP + L+ K+G + + ++ + F+ L +
Sbjct: 196 AVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR------FNPNLRHF 249
Query: 238 LILV-----SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
L+ + A+ +L + +AG EP Y L+ GYA+ G M LLA+
Sbjct: 250 TSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKK 309
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
+ + E +DE I F ++G +G E TYT L
Sbjct: 310 VNCGPNAASFTILIQSFCKTEKMDEAMRI-------FTEMQG-----SGCEADVVTYTTL 357
Query: 353 MCGYAKHGDMDSIRRLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQP-GV 408
+ G+ K G+ D +L Q G YL I+ A E E+I +++ G
Sbjct: 358 ISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGC 417
Query: 409 GYSADAANHIYHLINK-GQIDAAYRIVNTLARSA---NINGEQLPVGGFLVRHMVKTNQP 464
+ N + L+ K G + A R+ + ++ L V GFL +
Sbjct: 418 VPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQ-------- 469
Query: 465 GVGYSADAANHIYHLINKGQIDAAY-----RIVNTLARSANI------------NGEQLP 507
G +A ++ ++ +G + A + N L R+ + G +L
Sbjct: 470 --GCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMAKNMWSCMTTKGCELN 527
Query: 508 VGGFLVR-HMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKA 551
V + + H + +N + + + C + D +L P+ A L++
Sbjct: 528 VSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRG 572
>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
javanica]
Length = 431
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 130/306 (42%), Gaps = 41/306 (13%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL P +Y LM GY + G +D
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYIRLGXLDEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M + M GL P++ T+T L+
Sbjct: 198 RLKSAMXASGVQPDVYT-YSVLINGLX--KESXMDDXNELFDEMLXKGLVPNSVTFTTLI 254
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSG-----HGEYIDEVSAIVC 323
G+ K+G +D + Q S + D++ + + L G HG IDE
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHG-LIDE------ 307
Query: 324 FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGD 380
MS GL+P TYT L+ G K GD+D+ R+ + Q L +
Sbjct: 308 -------------MSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVA 354
Query: 381 YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
Y +I L G ++++ ++ VG D + I KG + + + +
Sbjct: 355 YTALISGLCQEGRSXDAEKMLREMLS-VGLKPDXGTYTMIINEFCKKGDVWKGXKXLKEM 413
Query: 438 ARSANI 443
R+ ++
Sbjct: 414 QRNGHV 419
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 6/199 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 211 DVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTF------TTLIDGHCKNGRVD 264
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M + +N L YG + D+ A G++ MS GL+P TYT L+
Sbjct: 265 LAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLI 324
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE +L M GL+
Sbjct: 325 DGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLK 384
Query: 262 PSAQTYTKLMCGYAKHGDM 280
P TYT ++ + K GD+
Sbjct: 385 PDXGTYTMIINEFCKKGDV 403
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 111/290 (38%), Gaps = 24/290 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + + G+ P +Y L++ Y
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNG------YI 188
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G ++ ++ M ++ LI G + + M + M GL P++
Sbjct: 189 RLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSV 248
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + Q ++ + D+ A G++ M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEM 308
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+D+ R+ + Q L + Y +I L G
Sbjct: 309 SMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRS 368
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+++ M GL+P TYT ++ + K GD+
Sbjct: 369 XDAEKMLR---------------EMLSVGLKPDXGTYTMIINEFCKKGDV 403
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 145/369 (39%), Gaps = 53/369 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN ++ T + L K+E G +PN VTY S LI C+D +
Sbjct: 197 DVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTY------STLIDSLCRDRLVN 250
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A I +M+ K + +LI G + + A +L M+ + P T+ L+
Sbjct: 251 EALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLV 310
Query: 202 CGYAKHGDMDS----IKTKI-----PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ K G + +KT P++ S L +S +D+ A +
Sbjct: 311 DTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLW---------TDVVEARKLF 361
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVS 309
+M G +P+ +Y L+ GY K +D +L + G + N Y +IH
Sbjct: 362 HVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQL 421
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G ++ F N+C + G P TY+ L+ G+ K G + RL
Sbjct: 422 GKLREAQDL-----FRNMCTN----------GNLPDLFTYSILLDGFCKQGYLGKAFRLF 466
Query: 370 AQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISK-----IQPGVGYSADAANHIYHL 421
S+ + + Y ++HA+ SG+ + ++ S+ +QP V N L
Sbjct: 467 RAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIIN---GL 523
Query: 422 INKGQIDAA 430
+G +D A
Sbjct: 524 CKEGLLDEA 532
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 109/290 (37%), Gaps = 59/290 (20%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L++ DI +N L+ + L + G+EPN VTY L+ L +
Sbjct: 297 LNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWT---- 352
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
++ A K+ M K + +N LI G+ +A + A + M GL P+ +
Sbjct: 353 --DVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVS 410
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y L+ G+ + G + A+ + M
Sbjct: 411 YNTLIHGFCQLG-----------------------------------KLREAQDLFRNMC 435
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE 313
G P TY+ L+ G+ K G + RL S+ + + Y ++HA+ SG+ +
Sbjct: 436 TNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHK 495
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
++ + + FV GL+P Q YT ++ G K G +D
Sbjct: 496 DARKLFSEL-FVQ--------------GLQPHVQLYTTIINGLCKEGLLD 530
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 113/272 (41%), Gaps = 46/272 (16%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
LA+++ +G P+ VTY L++ YC+ GN A + M P + +L
Sbjct: 296 LAEMDRKGFAPDGVTYNTLVNG------YCKVGNFHQALVLHSEMLRNGLPPDVVTYTSL 349
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--------IKTKI 217
I +A ++ A M GL P+ TYT L+ G+++ G MD I++
Sbjct: 350 INTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGF 409
Query: 218 PSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
P + N L+ VS M A G+L M GL P +Y+ ++ G+
Sbjct: 410 PP-----------TIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGF 458
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
++ ++D ++ A+ V+ D Y +I L ++E C +
Sbjct: 459 CRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLC---EQRRLNEA---------CDLF 506
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
E M L P TYT L+ GY K GD++
Sbjct: 507 QE---MLNKSLLPDEFTYTSLINGYCKEGDLN 535
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 10/210 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P D+ Y +L+ + +F ++ +G+ PN VTY + LI+ + Q G
Sbjct: 339 LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTY------TSLINGFSQKG 392
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A +I + M FP + +NAL+ GH + M A G+L M GL P +Y+
Sbjct: 393 FMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYS 452
Query: 199 KLMCGYAKHGDMDSIKTKIPSL--KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
++ G+ ++ ++D + K S + +S + L + A + M
Sbjct: 453 TIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGL--CEQRRLNEACDLFQEML 510
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
L P TYT L+ GY K GD++ L
Sbjct: 511 NKSLLPDEFTYTSLINGYCKEGDLNEALNL 540
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 129/339 (38%), Gaps = 72/339 (21%)
Query: 123 QLISNSKLISKYCQDGNIEGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGI 181
+ S + LI +C GN+E + E M R++ P + +N +I + + + A +
Sbjct: 202 NVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLP-NVVTYNTVIGAYCKLKRIDEAFKL 260
Query: 182 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV 241
L M GLEP+ TY ++ G + G ++
Sbjct: 261 LRSMGLEGLEPNLLTYNMVINGLCRVGRIE------------------------------ 290
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG---- 297
G+L M + G P TY L+ GY K G+ + L L NG
Sbjct: 291 -----ETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNF---HQALVLHSEMLRNGLPPD 342
Query: 298 --DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCG 355
Y +I+ + +G+ +N + + M GL P+ TYT L+ G
Sbjct: 343 VVTYTSLINTMCKAGN-------------LNRAMEFFD--QMHVRGLRPNGVTYTSLING 387
Query: 356 YAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSA 412
+++ G MD R+ + ++G Y +++ VSG E ++ ++ G G S
Sbjct: 388 FSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGME-GKGLSP 446
Query: 413 DAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVG 451
D ++ I A + L R+ +N E + G
Sbjct: 447 DVVSY-------STIIAGFCRYQELDRAFQMNAEMVEKG 478
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 127/332 (38%), Gaps = 66/332 (19%)
Query: 141 EGATKILEFMRDKTFPI--SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
E + ++D F S VF+ ++ S N + A I+ + G P +Y
Sbjct: 112 EKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYN 171
Query: 199 KLMCGYAKHGDMDSI----KTKIPSLKPQSELFL------CFSFQLTNLLILVSSDMASA 248
++ DSI K I + K E+ FS+ + + ++
Sbjct: 172 AIL---------DSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMG 222
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHA 305
M + P+ TY ++ Y K +D +LL G + + L +I+
Sbjct: 223 LRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVING 282
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
L G I+E S ++ M + G P TY L+ GY K G+
Sbjct: 283 LCRVGR---IEETSGVL------------AEMDRKGFAPDGVTYNTLVNGYCKVGN---F 324
Query: 366 RRLLAQNGSSLVNG------DYLDIIHALAVSGH----GEYIDEI-ISKIQP-GVGYSAD 413
+ L + L NG Y +I+ + +G+ E+ D++ + ++P GV Y++
Sbjct: 325 HQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTS- 383
Query: 414 AANHIYHLIN----KGQIDAAYRIVNTLARSA 441
LIN KG +D AYRI + + RS
Sbjct: 384 -------LINGFSQKGFMDEAYRIWDEMIRSG 408
Score = 44.3 bits (103), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 15/195 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK---------LIS 132
D YN L+ T L KL PN +TY LI + LI
Sbjct: 552 DTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIK 611
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C G + A ++ E M + +E V+N +I+GH + ++ A + M G P
Sbjct: 612 GFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIP 671
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI- 251
T L+ G + + I + +L +L+ L+ ++ + + +
Sbjct: 672 HTVTIIALVKALYSEGMDEQLNLVIRDILRSCKL---SDAELSKALVQINHKEGNIDAVF 728
Query: 252 --LTMMSQAGLEPSA 264
LT M++ G PS
Sbjct: 729 NLLTEMAKDGFLPSG 743
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 148/365 (40%), Gaps = 55/365 (15%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-----------SK 129
LD+ Y +L+ + ++ + K+E G +P +TY +++ +
Sbjct: 206 LDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITS 265
Query: 130 LISKY------------------CQDGNI-EGATKILEFMRDKTFPISEGVFNALIYGHS 170
L+ K C+ G++ + A ++ E M+ F + +NAL+ +
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELF 227
+++ A +L M G PS TY L+ YA+ G +D +K ++ + ++
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV- 384
Query: 228 LCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
F T LL + + SA I M AG +P+ T+ + Y G + +
Sbjct: 385 ----FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ + ++ D + LAV G EVS + M +AG P
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF------------KEMKRAGFVPE 488
Query: 346 AQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIIS 402
+T+ L+ Y++ G + ++ R + G + Y ++ ALA G E +++++
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 403 KIQPG 407
+++ G
Sbjct: 549 EMEDG 553
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 113/285 (39%), Gaps = 36/285 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YNALL VY + L ++ G P+ VTY LIS Y +DG ++
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS------AYARDGMLD 366
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ M +K + L+ G +A + SA I M AG +P+ T+ +
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFI 426
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCF----SFQLTNLLILVSSDMASAE--GILTMM 255
Y G + +K E+ +C LL + + +E G+ M
Sbjct: 427 KMYGNRGKFTEM------MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
+AG P +T+ L+ Y++ G + +V R + +G + Y ++ ALA G
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
E ++V A M +P+ TY L+ YA
Sbjct: 541 EQSEKVLA---------------EMEDGRCKPNELTYCSLLHAYA 570
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 78/179 (43%), Gaps = 6/179 (3%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
++L+ +G P+ T ++S Y + + A +L++M+++ F S +N+L
Sbjct: 617 FSELKERGFSPDITTLNSMVS------IYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
+Y HS++ D +E IL + G++P +Y ++ Y ++ M ++
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ ++ S A G++ M + G P+ TY ++ GY K D +
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 115/311 (36%), Gaps = 53/311 (17%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI +N LL V+ N + +++ G P R T+ + LIS Y + G+ E
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF------NTLISAYSRCGSFE 506
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M D +N ++ ++ +E +L M +P+ TY L+
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 202 CGYAKH---GDMDSIKTKIPS--LKPQSELF-----LC--------------------FS 231
YA G M S+ ++ S ++P++ L +C FS
Sbjct: 567 HAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFS 626
Query: 232 FQLTNLLILVS-----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+T L +VS +A A G+L M + G PS TY LM +++ D +
Sbjct: 627 PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI 686
Query: 287 LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
L + + + D + + + + S I M +G+ P
Sbjct: 687 LREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS------------EMRNSGIVPDV 734
Query: 347 QTYTKLMCGYA 357
TY + YA
Sbjct: 735 ITYNTFIGSYA 745
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 66/139 (47%), Gaps = 6/139 (4%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
++ YN+L+ ++ + + L ++ ++GI+P+ +IS + +I YC++ +
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPD------IISYNTVIYAYCRNTRMRD 717
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A++I MR+ +N I ++ + A G++ M + G P+ TY ++
Sbjct: 718 ASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVD 777
Query: 203 GYAKHGDMDSIKTKIPSLK 221
GY K D K + L+
Sbjct: 778 GYCKLNRKDEAKLFVEDLR 796
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 161/386 (41%), Gaps = 42/386 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN ++ ++ DF ++ S+GI P+ +TY S LI +C G +
Sbjct: 271 DVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITY------STLICGFCLAGQLM 324
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA +L M K + LI + + A+ +L +M++ G++P+ TY+ LM
Sbjct: 325 GAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLM 384
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSEL---FLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
GY G++ + K +I Q+E+ ++ + L S D A +L M
Sbjct: 385 DGYCLVGEVHNAK-QIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD--EAMNLLREMLHK 441
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
+ P+ TY L+ G K G + S L+ + D + L + +D+
Sbjct: 442 NVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDK- 500
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
AI F+ M + G++P+ TYT L+ G K + + ++L LV
Sbjct: 501 -AIALFMK----------MKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQH---ILVK 546
Query: 379 GDYLDI------IHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDA 429
G +D+ I L G + + SK++ G DA I L K + D
Sbjct: 547 GCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDN-GCIPDAVTFEIIIRSLFEKDENDK 605
Query: 430 AYRIVNTLARSA-----NINGEQLPV 450
A ++++ + N +GE+ PV
Sbjct: 606 AEKLLHEMIAKGLLHFRNFHGERSPV 631
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 120/270 (44%), Gaps = 24/270 (8%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F K+ +QG + N+V+Y L++ C+ G A K+L + D++ ++N
Sbjct: 224 FHDKVVAQGFQMNQVSYGTLLNG------LCKIGETRCAIKLLRMIEDRSTRPDVVMYNT 277
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+I G + + A T M+ G+ P TY+ L+CG+ G + + + + ++
Sbjct: 278 IIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKN 337
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+++ + + + A+ +L +M++ G++P+ TY+ LM GY G++ + +
Sbjct: 338 INPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAK 397
Query: 285 RLLAQSGSSLVN---GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
++ + VN Y +I+ L G+ +DE ++ M
Sbjct: 398 QIFHAMVQTEVNPSVCSYNIMINGLC---KGKSVDEAMNLL------------REMLHKN 442
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ P+ TY L+ G K G + S L+ +
Sbjct: 443 VVPNTVTYNSLIDGLCKSGRITSALDLMKE 472
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 9/125 (7%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H G+ P D+ Y +LL N++ K++ +GI+PN+ TY + LI
Sbjct: 475 HRGQ---PADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY------TALID 525
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
C+ ++ A K+ + + K I +N +I G + + A + + M G P
Sbjct: 526 GLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIP 585
Query: 193 SAQTY 197
A T+
Sbjct: 586 DAVTF 590
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+ +V + YN ++ + + L ++ + + PN VTY LI C
Sbjct: 405 QTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDG------LC 458
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G I A +++ + + P + +L+ G + ++ A + M + G++P+
Sbjct: 459 KSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKY 518
Query: 196 TYTKLMCGYAK 206
TYT L+ G K
Sbjct: 519 TYTALIDGLCK 529
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 59/293 (20%), Positives = 118/293 (40%), Gaps = 30/293 (10%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I + +L + +H + ++E +GIEP+ VT S LI+ +C G +
Sbjct: 132 IIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTL------SILINCFCHLGQMAF 185
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
+ +L + + + + L+ G ++ + + G + + +Y L+
Sbjct: 186 SFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLN 245
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI--LVSSDMAS-AEGILTMMSQAG 259
G K G+ + I L+ + + N +I L + + A T M+ G
Sbjct: 246 GLCKIGE---TRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRG 302
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYID 316
+ P TY+ L+CG+ G + LL + +N D Y +I AL G +
Sbjct: 303 IFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAK 362
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ + M++ G++P+ TY+ LM GY G++ + +++
Sbjct: 363 NLLGV---------------MTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIF 400
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%), Gaps = 12/214 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I Y ++ Y + +L S+ +E N + Y + +I +CQ+GN+
Sbjct: 569 NIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVY------NIIIKAHCQNGNVA 622
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++LE M+ K + +++LI+G + A+ ++ M + G P+ YT L+
Sbjct: 623 AALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALI 682
Query: 202 CGYAKHGDMDSIKT---KIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
GY K G MD+ ++ ++ S F ++ + L +M A +L M ++
Sbjct: 683 GGYCKLGQMDTAESTWLEMISFNIHPNKFT-YTVMIDGYCKL--GNMEKANNLLIKMKES 739
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
G+ P TY L G+ K DMD+ ++ Q +
Sbjct: 740 GIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMAT 773
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 6/189 (3%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN +++ + N + + L ++S+GI PN TY S LI C G +E A
Sbjct: 608 YNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATY------SSLIHGVCNIGLVEDAKH 661
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+++ MR + F + + ALI G+ + M +AE M + P+ TYT ++ GY
Sbjct: 662 LIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYC 721
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G+M+ + +K + ++ + ++DM +A + M+ GL
Sbjct: 722 KLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEI 781
Query: 266 TYTKLMCGY 274
TYT L+ G+
Sbjct: 782 TYTTLVHGW 790
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 98/473 (20%), Positives = 175/473 (36%), Gaps = 94/473 (19%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ K+E GI PN VTY +I+ CQ+G ++ A ++ E M K + +
Sbjct: 241 ELFMKMEKLGISPNVVTYNCIING------LCQNGRLDNAFELKEKMTVKGVQPNLKTYG 294
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
ALI G + N IL M AG P+ + L+ GY K G+++
Sbjct: 295 ALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIE------------ 342
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
A I +M + P++ T LM G+ K ++
Sbjct: 343 -----------------------GALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHA 379
Query: 284 RRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
L + SG S+ + ++H L + SA F + + MM
Sbjct: 380 ENALEEILSSGLSIHPDNCYSVVHWLC-----KKFRYHSA--------FRFTK--MMLSR 424
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGH---- 393
PS T L+CG K G L L + GS +IH L +G
Sbjct: 425 NFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEA 484
Query: 394 GEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGF 453
+ E++ + P + +A I N+G+++ +R+ + +
Sbjct: 485 SRIVKEMLERGLPMDRITYNAL--ILGFCNEGKVEGCFRLREEMTK-------------- 528
Query: 454 LVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLV 513
+ QP + Y+ + + L N G++D A ++ + S I+ + G ++
Sbjct: 529 ------RGIQPDI-YTYNFL--LRGLCNVGKLDDAIKLWDEFKASGLIS--NIHTYGIMM 577
Query: 514 RHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFE 566
K N+ I+ V + + L + + + ++IKAH + A++ E
Sbjct: 578 EGYCKANR-IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLE 629
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 126/303 (41%), Gaps = 36/303 (11%)
Query: 95 DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT 154
D +H T+ +L +G ++VT SN+ LI C G + A++I++ M ++
Sbjct: 443 DGKH-LEATELWFRLLEKGSPASKVT-----SNA-LIHGLCGAGKLPEASRIVKEMLERG 495
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
P+ +NALI G + + M++ G++P TY L+ G G +D
Sbjct: 496 LPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAI 555
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
K + ++ + ++ + E + + +E ++ Y ++ +
Sbjct: 556 KLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 615
Query: 275 AKHGDMDSVRRLL--AQSGSSLVN-GDYLDIIHALAVSGHGE----YIDE------VSAI 321
++G++ + +LL +S L N Y +IH + G E IDE V +
Sbjct: 616 CQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 675
Query: 322 VCFVNI----C---------FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
VC+ + C WLE M + P+ TYT ++ GY K G+M+ L
Sbjct: 676 VCYTALIGGYCKLGQMDTAESTWLE---MISFNIHPNKFTYTVMIDGYCKLGNMEKANNL 732
Query: 369 LAQ 371
L +
Sbjct: 733 LIK 735
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 118/307 (38%), Gaps = 46/307 (14%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+L + ++ YN ++ N + + K+ +G++PN TY LI+ ++ +
Sbjct: 248 KLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFF- 306
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ IL+ M F + VFN LI G+ + ++ A I +M + P++
Sbjct: 307 -----DKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSV 361
Query: 196 TYTKLMCGYAK-----HGD--MDSIKTKIPSLKPQSEL----FLCFSFQLTNLLILVSSD 244
T LM G+ K H + ++ I + S+ P + +LC F+
Sbjct: 362 TLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFR----------- 410
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLD 301
SA MM PS T L+CG K G L L + GS
Sbjct: 411 YHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNA 470
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+IH L +G + E S IV M + GL TY L+ G+ G
Sbjct: 471 LIHGLCGAGK---LPEASRIV------------KEMLERGLPMDRITYNALILGFCNEGK 515
Query: 362 MDSIRRL 368
++ RL
Sbjct: 516 VEGCFRL 522
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 107/247 (43%), Gaps = 18/247 (7%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+ L+ C+DG AT++ + +K P S+ NALI+G A + A I+ M +
Sbjct: 434 TMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLE 493
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
GL TY L+ G+ G ++ ++ ++ Q +++ ++F L L + D
Sbjct: 494 RGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYT-YNFLLRGLCNVGKLD 552
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
A + +GL + TY +M GY K ++ V L + S + + I++
Sbjct: 553 --DAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELN--SIVY 608
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
+ + H + + +A+ N M G+ P+ TY+ L+ G G ++
Sbjct: 609 NIIIKAHCQNGNVAAALQLLEN----------MKSKGILPNCATYSSLIHGVCNIGLVED 658
Query: 365 IRRLLAQ 371
+ L+ +
Sbjct: 659 AKHLIDE 665
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 72/378 (19%), Positives = 149/378 (39%), Gaps = 40/378 (10%)
Query: 162 FNALIYGHS-QANDM--ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIP 218
F+ LI+ +S Q ++ + A + ++++ G PS +T + K + +
Sbjct: 151 FDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKC---CE 207
Query: 219 SLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
+ SE F TN++ + M +A + M + G+ P+ TY ++ G +
Sbjct: 208 VFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQ 267
Query: 277 HGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
+G +D+ L + V + Y +I+ L + D+V+ I+
Sbjct: 268 NGRLDNAFELKEKMTVKGVQPNLKTYGALINGLI---KLNFFDKVNHIL----------- 313
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAV 390
M AG P+ + L+ GY K G+++ I+ ++ + + ++
Sbjct: 314 -DEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCK 372
Query: 391 SGHGEYIDEIISKI-QPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLARSANINGEQL 448
S E+ + + +I G+ D + H L K + +A+R + S N L
Sbjct: 373 SDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMML-SRNFRPSDL 431
Query: 449 PVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPV 508
+ LV + K G +A + L+ KG A ++ + +LP
Sbjct: 432 LL-TMLVCGLCKD-----GKHLEATELWFRLLEKGS--PASKVTSNALIHGLCGAGKLPE 483
Query: 509 GGFLVRHMVKTNQPIDKV 526
+V+ M++ P+D++
Sbjct: 484 ASRIVKEMLERGLPMDRI 501
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 15/230 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I Y ++ Y + +L S+ +E N + Y + +I +CQ+GN+
Sbjct: 592 NIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVY------NIIIKAHCQNGNVA 645
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++LE M+ K + +++LI+G + A+ ++ M + G P+ YT L+
Sbjct: 646 AALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALI 705
Query: 202 CGYAKHGDMDSIKT---KIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
GY K G MD+ ++ ++ S F ++ + L +M A +L M ++
Sbjct: 706 GGYCKLGQMDTAESTWLEMISFNIHPNKFT-YTVMIDGYCKL--GNMEKANNLLIKMKES 762
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHA 305
G+ P TY L G+ K DMD+ ++ Q + + D Y ++H
Sbjct: 763 GIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 6/189 (3%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN +++ + N + + L ++S+GI PN TY S LI C G +E A
Sbjct: 631 YNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATY------SSLIHGVCNIGLVEDAKH 684
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+++ MR + F + + ALI G+ + M +AE M + P+ TYT ++ GY
Sbjct: 685 LIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYC 744
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G+M+ + +K + ++ + ++DM +A + M+ GL
Sbjct: 745 KLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEI 804
Query: 266 TYTKLMCGY 274
TYT L+ G+
Sbjct: 805 TYTTLVHGW 813
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 96/473 (20%), Positives = 175/473 (36%), Gaps = 94/473 (19%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ K+E GI PN VTY +I+ CQ+G ++ A ++ E M K + +
Sbjct: 264 ELFMKMEKLGISPNVVTYNCIING------LCQNGRLDNAFELKEKMTVKGVQPNLKTYG 317
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
ALI G + N +L M +G P+ + L+ GY K G+++
Sbjct: 318 ALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIE------------ 365
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
A I +M + P++ T LM G+ K ++
Sbjct: 366 -----------------------GALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHA 402
Query: 284 RRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
L + SG S+ + ++H L + SA F + + MM
Sbjct: 403 ENALEEILSSGLSIHPDNCYSVVHWLC-----KKFRYHSA--------FRFTK--MMLSR 447
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGH---- 393
PS T L+CG K G L L + GS +IH L +G
Sbjct: 448 NFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEA 507
Query: 394 GEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGF 453
+ E++ + P + +A I N+G+++ +R+ + +
Sbjct: 508 SRIVKEMLERGLPMDRITYNAL--ILGFCNEGKVEGCFRLREEMTK-------------- 551
Query: 454 LVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLV 513
+ QP + Y+ + + L N G++D A ++ + S I+ + G ++
Sbjct: 552 ------RGIQPDI-YTYNFL--LRGLCNVGKLDDAIKLWDEFKASGLIS--NIHTYGIMM 600
Query: 514 RHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFE 566
K N+ I+ V + + L + + + ++IKAH + A++ E
Sbjct: 601 EGYCKANR-IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLE 652
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 126/303 (41%), Gaps = 36/303 (11%)
Query: 95 DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT 154
D +H T+ +L +G ++VT SN+ LI C G + A++I++ M ++
Sbjct: 466 DGKH-LEATELWFRLLEKGSPASKVT-----SNA-LIHGLCGAGKLPEASRIVKEMLERG 518
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
P+ +NALI G + + M++ G++P TY L+ G G +D
Sbjct: 519 LPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAI 578
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
K + ++ + ++ + E + + +E ++ Y ++ +
Sbjct: 579 KLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAH 638
Query: 275 AKHGDMDSVRRLL--AQSGSSLVN-GDYLDIIHALAVSGHGE----YIDE------VSAI 321
++G++ + +LL +S L N Y +IH + G E IDE V +
Sbjct: 639 CQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNV 698
Query: 322 VCFVNI----C---------FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
VC+ + C WLE M + P+ TYT ++ GY K G+M+ L
Sbjct: 699 VCYTALIGGYCKLGQMDTAESTWLE---MISFNIHPNKFTYTVMIDGYCKLGNMEKANNL 755
Query: 369 LAQ 371
L +
Sbjct: 756 LIK 758
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 106/245 (43%), Gaps = 18/245 (7%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ C+DG AT++ + +K P S+ NALI+G A + A I+ M + G
Sbjct: 459 LVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERG 518
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
L TY L+ G+ G ++ ++ ++ Q +++ ++F L L + D
Sbjct: 519 LPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYT-YNFLLRGLCNVGKLD-- 575
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
A + +GL + TY +M GY K ++ V L + S + + I++ +
Sbjct: 576 DAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELN--SIVYNI 633
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
+ H + + +A+ N M G+ P+ TY+ L+ G G ++ +
Sbjct: 634 IIKAHCQNGNVAAALQLLEN----------MKSKGILPNCATYSSLIHGVCNIGLVEDAK 683
Query: 367 RLLAQ 371
L+ +
Sbjct: 684 HLIDE 688
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 118/307 (38%), Gaps = 46/307 (14%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+L + ++ YN ++ N + + K+ +G++PN TY LI+ ++ +
Sbjct: 271 KLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFF- 329
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ +L+ M F + VFN LI G+ + ++ A I +M + P++
Sbjct: 330 -----DKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSV 384
Query: 196 TYTKLMCGYAK-----HGD--MDSIKTKIPSLKPQSEL----FLCFSFQLTNLLILVSSD 244
T LM G+ K H + ++ I + S+ P + +LC F+
Sbjct: 385 TLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFR----------- 433
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLD 301
SA MM PS T L+CG K G L L + GS
Sbjct: 434 YHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNA 493
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+IH L +G + E S IV M + GL TY L+ G+ G
Sbjct: 494 LIHGLCGAGK---LPEASRIV------------KEMLERGLPMDRITYNALILGFCNEGK 538
Query: 362 MDSIRRL 368
++ RL
Sbjct: 539 VEGCFRL 545
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 71/378 (18%), Positives = 150/378 (39%), Gaps = 40/378 (10%)
Query: 162 FNALIYGHS-QANDM--ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIP 218
F+ LI+ +S Q ++ + A + ++++ G PS +T L+ K + +
Sbjct: 174 FDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKC---CE 230
Query: 219 SLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
+ SE F TN++ + M +A + M + G+ P+ TY ++ G +
Sbjct: 231 VFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQ 290
Query: 277 HGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
+G +D+ L + V + Y +I+ L + D+V+ ++
Sbjct: 291 NGRLDNAFELKEKMTVKGVQPNLKTYGALINGLI---KLNFFDKVNHVL----------- 336
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAV 390
M +G P+ + L+ GY K G+++ I+ ++ + + ++
Sbjct: 337 -DEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCK 395
Query: 391 SGHGEYIDEIISKI-QPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLARSANINGEQL 448
S E+ + + +I G+ D + H L K + +A+R + S N L
Sbjct: 396 SDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMML-SRNFRPSDL 454
Query: 449 PVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPV 508
+ LV + K G +A + L+ KG A ++ + +LP
Sbjct: 455 LL-TMLVCGLCKD-----GKHLEATELWFRLLEKGS--PASKVTSNALIHGLCGAGKLPE 506
Query: 509 GGFLVRHMVKTNQPIDKV 526
+V+ M++ P+D++
Sbjct: 507 ASRIVKEMLERGLPMDRI 524
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 117/293 (39%), Gaps = 21/293 (7%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP + Y AL+ Y + + L +++ + + P+ +TY +I++ C G
Sbjct: 173 VPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVINS-------CARG 225
Query: 139 --NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
N EG + MR + +N L+ + AE + M++ G+ P T
Sbjct: 226 GLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITT 285
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y L+ + K ++ + + ++ L S+ + D+ A G+ M
Sbjct: 286 YRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFRQMQ 345
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
+A P+A TY+ L+ Y HG D VR L + S D + V G G Y
Sbjct: 346 EARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFK 405
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
EV + FH M + +EP+ TY L+ K G + +++L
Sbjct: 406 EVVTL-------FH-----DMVEENVEPNMGTYEGLIYACGKGGLHEDAKKIL 446
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 111/285 (38%), Gaps = 54/285 (18%)
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
+ + S + LI+ Y + G E + ++LE M+ + S +N +I +S A + EG+
Sbjct: 175 RSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSILTYNTVI--NSCARGGLNWEGL 232
Query: 182 LTM---MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL 238
L++ M G++P TY L+ A G D
Sbjct: 233 LSLFAEMRHEGIQPDIITYNTLLNACANRGLGDE-------------------------- 266
Query: 239 ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD 298
AE + M++ G+ P TY L+ + K ++ V LL + SS G+
Sbjct: 267 ---------AEMVFRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESS---GN 314
Query: 299 YLDII-HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
DI + + + + D A+ F M +A P+A TY+ L+ Y
Sbjct: 315 LPDISSYNVLLEAYASKGDIRHAMGVF----------RQMQEARCVPNAVTYSMLLNLYG 364
Query: 358 KHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIIS 402
HG D +R L + S D + V G G Y E+++
Sbjct: 365 GHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVT 409
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 60/322 (18%), Positives = 114/322 (35%), Gaps = 47/322 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL----------------- 124
DIS YN LL Y +++ PN VTY L
Sbjct: 317 DISSYNVLLEAYASKGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELF 376
Query: 125 ----ISNSK--------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
+SN++ LI + + G + + M ++ + G + LIY +
Sbjct: 377 LEMKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKG 436
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
A+ IL M + G+ PS + YT ++ Y G S + + +E+ +
Sbjct: 437 GLHEDAKKILLHMDEKGIVPSTKAYTGVIEAY---GQAASYEEALVMFNTMNEMGSKPTV 493
Query: 233 QLTNLLILVSSD---MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ N LI + + +E I+ M ++G+ ++ ++ GY + G + + +
Sbjct: 494 ETYNSLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVE 553
Query: 290 SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY 349
+ D L+V +DE + + +G+ PS Y
Sbjct: 554 LEKARFQPDERTFEAVLSVYCTAGLVDESEE------------QFREIRASGILPSVMCY 601
Query: 350 TKLMCGYAKHGDMDSIRRLLAQ 371
++ YA+ D +L +
Sbjct: 602 CMMIAVYARSNRWDDAYEVLDE 623
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 114/273 (41%), Gaps = 30/273 (10%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
K+ G P VTY LI+ Y GN+ A ++L+ M++ E +N
Sbjct: 430 LFEKMLKMGPLPTVVTYNTLING------YLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
L+ G S+ + SA M + GL P+ +YT L+ G++K G +D + LK
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVD---IALSLLKRME 540
Query: 225 ELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
E+ + + N +I + + AE I M + GL P+ TYT L+ G ++G
Sbjct: 541 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQ 600
Query: 282 SVRRLL--AQSGSSLVN-GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
++ + L N Y +I+ L G DE ++ M
Sbjct: 601 FAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA---DEAEILL------------KEME 645
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ GL P T+T L+ G+ G +D LL +
Sbjct: 646 RKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR 678
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 147/370 (39%), Gaps = 62/370 (16%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+ D+ D+ Y +L+ + N + ++ +G +PN VTY S LI+ C
Sbjct: 226 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTY------STLINGLC 279
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+G ++ A +LE M +K + + I A ++ M + G P+ Q
Sbjct: 280 NEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQ 339
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELF------LCFSFQLTNLL------ 238
TYT L+ G ++ G ++ K L P + + LC + + L
Sbjct: 340 TYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 399
Query: 239 ------------------ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
+ + D+ A + M + G P+ TY L+ GY G++
Sbjct: 400 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNV 459
Query: 281 DSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
++ RLL ++G Y +++ + G E + F++ E M
Sbjct: 460 NNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE------------SASFYFQE---M 504
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHG 394
+ GL P+ +YT L+ G++K G +D S+ + + + G + Y +I+ L+
Sbjct: 505 VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRF 564
Query: 395 EYIDEIISKI 404
++I K+
Sbjct: 565 SEAEKICDKM 574
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 99/245 (40%), Gaps = 53/245 (21%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------ 127
YN L+ YL + + L ++ G EP+ TY +L+S
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Query: 128 -----------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
+ LI + +DG ++ A +L+ M + + +NA+I G S+ N +
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG----------DMDSIKTKIPSLKPQSEL 226
AE I M + GL P+ TYT L+ G ++G DM+ K +P+L S L
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC-LPNLYTYSSL 624
Query: 227 F--LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
LC AE +L M + GL P T+T L+ G+ G +D
Sbjct: 625 IYGLC-----------QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAF 673
Query: 285 RLLAQ 289
LL +
Sbjct: 674 LLLRR 678
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 32/260 (12%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K+ +G+ PN VTY + LI++ C G A KI +M + +N +I
Sbjct: 363 KMLKEGLVPNTVTY------NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIK 416
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G D+ A + M + G P+ TY L+ GY G++++ + +K
Sbjct: 417 GLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG--- 473
Query: 228 LCFSFQLT-NLLILVSS---DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD-- 281
C + T N L+ S + SA M + GL P+ +YT L+ G++K G +D
Sbjct: 474 -CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIA 532
Query: 282 -SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
S+ + + + G + Y +I+ L+ +++ M +
Sbjct: 533 LSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC---------------DKMVEQ 577
Query: 341 GLEPSAQTYTKLMCGYAKHG 360
GL P+ TYT L+ G ++G
Sbjct: 578 GLLPNVITYTTLIDGLCRNG 597
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 86/426 (20%), Positives = 154/426 (36%), Gaps = 97/426 (22%)
Query: 89 LLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILE 148
+++ + E DFL ++ G + L S + L+ + + +EGA + +
Sbjct: 134 MIKACRNEEEIRRVADFLNEISGMGFGFS------LYSCNTLLIQLAKFEMVEGARNLYK 187
Query: 149 FMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 208
M + S FN LI S+ + AE IL+ + Q L P TYT L+ G+ ++
Sbjct: 188 QMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNR 247
Query: 209 DMDSI-----KTKIPSLKPQSELF------LC------------------------FSFQ 233
++D + P S + LC +++
Sbjct: 248 NLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYT 307
Query: 234 LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQS 290
L + A ++ M + G P+ QTYT L+ G ++ G ++ L + +
Sbjct: 308 LPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE 367
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG---------------- 334
G Y +I+ L V G ++ FHW+EG
Sbjct: 368 GLVPNTVTYNALINELCVGGRFSTALKI----------FHWMEGHGSLANTQTYNEIIKG 417
Query: 335 --------------PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL---AQNGSSLV 377
M + G P+ TY L+ GY G++++ RLL +NG
Sbjct: 418 LCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPD 477
Query: 378 NGDYLDIIHALAVSGHGE----YIDEII-SKIQPG-VGYSADAANHIYHLINKGQIDAAY 431
Y +++ + G E Y E++ + P V Y+A H G++D A
Sbjct: 478 EWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGH----SKDGKVDIAL 533
Query: 432 RIVNTL 437
++ +
Sbjct: 534 SLLKRM 539
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 142/330 (43%), Gaps = 30/330 (9%)
Query: 86 YNALLRVYLDNEHTFSP-TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI-EGA 143
YN +L VY +S + ++S G+ P+ TY LIS+ C+ G++ E A
Sbjct: 258 YNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISS-------CRRGSLYEEA 310
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
++ E M+ F + +NAL+ + ++ A +L M +G PS TY L+
Sbjct: 311 AEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISA 370
Query: 204 YAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
YA+ G +D +K+++ + ++F ++ L+ D A + M AG
Sbjct: 371 YARDGLLDEAMELKSQMVKKGIKPDVF-TYTTLLSGFEKTGKDDYAMK--VFEEMRVAGC 427
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
+P+ T+ L+ + G+ + ++ + D + LAV G EVS
Sbjct: 428 QPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSG 487
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLV 377
+ M +AG P T+ L+ Y++ G D +I R + G +
Sbjct: 488 VF------------KEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPD 535
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISKIQPG 407
Y ++ ALA G E ++++++++ G
Sbjct: 536 LSTYNAVLAALARGGLWEQSEKVLAEMKDG 565
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
++ YN+L+ +Y EH D L ++ ++G++P+ +IS + +I YC++G ++
Sbjct: 676 LTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPD------IISFNTVIFAYCRNGRMKE 729
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A++I M+D +N I ++ + A ++ M + +P+ TY L+
Sbjct: 730 ASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLID 789
Query: 203 GYAKHGDMDSIKTKIPSLK 221
+ K D + I +L+
Sbjct: 790 WFCKLNRRDEANSFISNLR 808
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 116/308 (37%), Gaps = 42/308 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP DI +N LL V+ N + +++ G P R T+ LIS Y + G
Sbjct: 463 VP-DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS------AYSRCG 515
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A I M D +NA++ ++ +E +L M +P+ TY
Sbjct: 516 FFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYC 575
Query: 199 KLMCGYAKHGD---MDSIKTKIPS--LKPQSELFLCFSFQLTNLLILVSSD-MASAEGIL 252
L+ YA + M ++ +I S ++PQ+ L T +L+ SD + E
Sbjct: 576 SLLHAYANGKEVERMSALAEEIYSGIIEPQAVLL------KTLVLVYSKSDLLTETERAF 629
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKH---GDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+ + G P T ++ Y + + + + SG + Y +++ + +
Sbjct: 630 LELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRT 689
Query: 310 GHGEYIDEV----------SAIVCFVNICFHWLEGPMMSQA----------GLEPSAQTY 349
H E +++ I+ F + F + M +A GL P TY
Sbjct: 690 EHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITY 749
Query: 350 TKLMCGYA 357
+ YA
Sbjct: 750 NTFIASYA 757
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 94/254 (37%), Gaps = 22/254 (8%)
Query: 117 NRVTYQQLISNSK---LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
NR + ++SNS +IS ++G A +L +R+ I + +LI ++
Sbjct: 175 NREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNG 234
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG-DMDSIKTKIPSLKPQSELFLCFSF 232
A + + + G P+ TY ++ Y K G I + S+K +++
Sbjct: 235 RYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTY 294
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ--- 289
S A + M AG P TY L+ Y K +L +
Sbjct: 295 NTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEA 354
Query: 290 SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY 349
SG + Y +I A A G +DE + M + G++P TY
Sbjct: 355 SGFAPSIVTYNSLISAYARDG---LLDEAMEL------------KSQMVKKGIKPDVFTY 399
Query: 350 TKLMCGYAKHGDMD 363
T L+ G+ K G D
Sbjct: 400 TTLLSGFEKTGKDD 413
>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g54980, mitochondrial; Flags: Precursor
gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 851
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 145/345 (42%), Gaps = 29/345 (8%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N +L T T+ L+K+ES+GI PN V+Y ++ +C+ N++ A +
Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLG------HCRQKNMDLARIV 500
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
+ +K + ++ LI G + +D +A ++ M+ + +E + Y ++ G K
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 207 HGDMDSIKTKIPSLKPQSELFL-CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
G + + ++ + L + C S+ +M SA M G+ P+
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI-IHALAVSGHGEYIDEVSAIVCF 324
TYT LM G K+ MD + + + G LDI + + G + + SA F
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNK---GVKLDIPAYGALIDGFCKRSNMESASALF 677
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM----DSIRRLLAQNGSSLVNGD 380
+ + GL PS Y L+ G+ G+M D +++L ++G G
Sbjct: 678 SELL----------EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML-KDGLRCDLGT 726
Query: 381 YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
Y +I L G+ E+ +++Q VG D IY +I G
Sbjct: 727 YTTLIDGLLKDGNLILASELYTEMQ-AVGLVPDEI--IYTVIVNG 768
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 128/325 (39%), Gaps = 53/325 (16%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+ L+ N + + + + S IE N V YQ +I+ C+ G A +
Sbjct: 516 YSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIING------LCKVGQTSKARE 569
Query: 146 ILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
+L M +K +S +N++I G + +M SA M G+ P+ TYT LM G
Sbjct: 570 LLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGL 629
Query: 205 AKHGDMDS------------IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
K+ MD +K IP+ + F C S+M SA +
Sbjct: 630 CKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF-C-----------KRSNMESASALF 677
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDM----DSVRRLLAQSGSSLVNGDYLDIIHALAV 308
+ + + GL PS Y L+ G+ G+M D +++L + G G Y +I L
Sbjct: 678 SELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML-KDGLRCDLGTYTTLIDGLLK 736
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
G+ E+ M GL P YT ++ G +K G + ++
Sbjct: 737 DGNLILASELYT---------------EMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKM 781
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGH 393
+ + V + L I+ ++GH
Sbjct: 782 FEEMKKNNVTPNVL--IYNAVIAGH 804
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 128/307 (41%), Gaps = 64/307 (20%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
P++ TY +I S + GN++ A ++ + M ++ +LI GH + ND+
Sbjct: 302 PSQETYTSVILAS------VKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDL 355
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKP-------- 222
SA + M + G P++ T++ L+ + K+G+M+ K ++ L P
Sbjct: 356 VSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTI 415
Query: 223 ---------QSELFLCF--SFQLTNLLILVSSDMAS----------AEGILTMMSQAGLE 261
E F SF+ + V + + S A +L+ M G+
Sbjct: 416 IQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSSLVNGDYL--DIIHALAV 308
P+ +Y +M G+ + +MD R + + + S L++G + D +AL V
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 309 SGHGEYID-EVSAIV--CFVN-IC-------FHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
H + EV+ +V +N +C L M+ + L S +Y ++ G+
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF 595
Query: 358 KHGDMDS 364
K G+MDS
Sbjct: 596 KEGEMDS 602
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/328 (19%), Positives = 121/328 (36%), Gaps = 69/328 (21%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ +++ +L+ + N S K+E +G PN VT+ S LI + ++G
Sbjct: 335 ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTF------SVLIEWFRKNG 388
Query: 139 NIEGATKILEFMR-------------------------------DKTFPISEG---VFNA 164
+E A + + M D++F V N
Sbjct: 389 EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNT 448
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS----- 219
++ + A +L+ M G+ P+ +Y +M G+ + +MD + +
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
LKP + +++ + + D +A ++ M+ + +E + Y ++ G K G
Sbjct: 509 LKPNN-----YTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ 563
Query: 280 MDSVRRLLA----QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
R LLA + + Y II G + SA+ + +C +
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMD-----SAVAAYEEMCGN----- 613
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
G+ P+ TYT LM G K+ MD
Sbjct: 614 -----GISPNVITYTSLMNGLCKNNRMD 636
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V LDI Y AL+ + + S + ++L +G+ P++ Y LIS + + G
Sbjct: 650 VKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNL------G 703
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A + + M G + LI G + ++ A + T M GL P YT
Sbjct: 704 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYT 763
Query: 199 KLMCGYAKHG 208
++ G +K G
Sbjct: 764 VIVNGLSKKG 773
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGSGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ + K G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVL 314
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 85/435 (19%), Positives = 168/435 (38%), Gaps = 56/435 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + S + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGSGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G++D+
Sbjct: 264 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAAD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK-----IQPGVGYSADAA 415
+ + + + G Y +I +G + +D++I K Q + +A
Sbjct: 313 VLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPNAY 372
Query: 416 N-HIYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
N I +L N GQ A TL R G Q P L+R G+S +
Sbjct: 373 NPMIEYLCNNGQASKA----ETLVRQLMKLGVQDPTALNTLIR----------GHSQE-- 416
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRL 533
G D+A+ ++ + R ++ E+ LV+ +K N+P D A+ +
Sbjct: 417 ---------GSPDSAFELLKIMLRR-KVDSEKSAYNS-LVQSYLKKNEPXDAKAALDSMI 465
Query: 534 TDENLHPRAFNLAVL 548
+++L A +V+
Sbjct: 466 ENDHLPDSALFRSVM 480
Score = 46.2 bits (108), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 67/333 (20%), Positives = 130/333 (39%), Gaps = 45/333 (13%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPG 407
TYT L+ GY +D RL+ + S + + + L + E + E ++
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEM 281
Query: 408 V-GYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGV 466
+ Y A N I+ R++++ +S N++ +++ M++ + P
Sbjct: 282 MDKYLAPTDNSIF-----------MRLISSHCKSGNLDA-----AADVLKAMIRLSVPT- 324
Query: 467 GYSADAANHIYHLINK----GQIDAAYRIVNTL 495
A H LI K GQ D A ++++ L
Sbjct: 325 -----EAGHYGLLIEKFCKAGQYDKAVKLLDKL 352
>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
Length = 877
Score = 73.9 bits (180), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 112/279 (40%), Gaps = 24/279 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN +++ + + + +++ + P T+ +I + + G +
Sbjct: 517 DVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHG------FARAGEMR 570
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + MR + FNAL+ G + M A IL M+ AG+ P TYT +M
Sbjct: 571 RALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIM 630
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYA GD L+ + F+++ S M SA + MS +
Sbjct: 631 NGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIP 690
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
+ Y L+ G+A+ GD+ L+ Q V D Y I+A +G D +
Sbjct: 691 RNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAG-----DML 745
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
A M G++P+ +TYT L+ G+A
Sbjct: 746 RATKTIQE----------MEALGVKPNVKTYTTLIHGWA 774
Score = 56.2 bits (134), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 138/324 (42%), Gaps = 31/324 (9%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++ Y + G++ A + E MR + S V+ +LI+ ++ DM A + M + G
Sbjct: 308 MVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMKEEG 367
Query: 190 LEPSAQTYTKLMCGYAKHG------DMDSIKTKIPSLKPQS-ELFLCFSFQLTNLLILVS 242
+E S TY+ ++ G+AK G +MD ++ + ++ + + + + N ++
Sbjct: 368 VEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYTMIG 427
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDY 299
++ + + + G PS +Y L+ Y K G + V +++ +G Y
Sbjct: 428 NE-EKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTY 486
Query: 300 LDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
++ ++G + D +A F ++ + GL+P Y ++ +
Sbjct: 487 -----SMLINGFLKLKDWTNAFTVFEDVI----------KDGLKPDVVLYNNIIKAFCGM 531
Query: 360 GDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI-QPGVGYSADAA 415
G+MD + + + + + ++ IIH A +G EI + + G +
Sbjct: 532 GNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTF 591
Query: 416 NH-IYHLINKGQIDAAYRIVNTLA 438
N + L+ K Q++ A I++ +A
Sbjct: 592 NALVLGLVEKRQMEKAVEILDEMA 615
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 117/302 (38%), Gaps = 29/302 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +L+ Y + K++ +G+E + VTY ++ I Q N++ A
Sbjct: 340 YTSLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAES 399
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
++ M ++ +++ ++ G++ + + + + G PS +Y L+ Y
Sbjct: 400 LVREMEEEGIDAPIDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYT 459
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEP 262
K G + + K + + + ++LI L D +A + + + GL+P
Sbjct: 460 KMG---KVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKP 516
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSL---VNGDYLDIIHALAVSGHG----EYI 315
Y ++ + G+MD ++ + + ++ IIH A +G E
Sbjct: 517 DVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIF 576
Query: 316 DEVSAIVC------FVNICFHWLEGPMMSQ----------AGLEPSAQTYTKLMCGYAKH 359
D + C F + +E M + AG+ P TYT +M GYA
Sbjct: 577 DMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAAL 636
Query: 360 GD 361
GD
Sbjct: 637 GD 638
Score = 46.6 bits (109), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD+ Y ALL+ + S ++ +Q I N Y LI + + G++
Sbjct: 656 LDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDG------WARRGDV 709
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A +++ M+ + + + I +A DM A + M G++P+ +TYT L
Sbjct: 710 WEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTL 769
Query: 201 MCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL 238
+ G+A + + K+ LKP ++ C +T+LL
Sbjct: 770 IHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCL---MTSLL 809
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 24/209 (11%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
F ++ +++ DM A M G+ PS+ YT L+ YA DM+ + + +K
Sbjct: 305 FGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMK 364
Query: 222 PQS-ELFL-CFSFQLTNLLILVSSD----MASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
+ E+ L +S + + ++D M AE ++ M + G++ Y +M GY
Sbjct: 365 EEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYT 424
Query: 276 KHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWL 332
G+ + V + L + G + Y +I+ G EVS
Sbjct: 425 MIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSK------------ 472
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
MM AG++ + +TY+ L+ G+ K D
Sbjct: 473 ---MMESAGIKHNMKTYSMLINGFLKLKD 498
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
++P + YN L+ + + D + +++ +G++P+ TY + I+ C+
Sbjct: 688 NIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTY------TSFINACCKA 741
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G++ ATK ++ M + + LI+G + A+ A M AGL+P Y
Sbjct: 742 GDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVY 801
Query: 198 TKLM 201
LM
Sbjct: 802 HCLM 805
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 142/330 (43%), Gaps = 30/330 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLA-KLESQGIEPNRVTYQQLISNSKLISKYCQDGNI-EGA 143
YN +L VY +S L ++S G+ P+ TY LIS+ C+ G++ E A
Sbjct: 258 YNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISS-------CRRGSLYEEA 310
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
++ E M+ F + +NAL+ + ++ A +L M +G PS TY L+
Sbjct: 311 AEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISA 370
Query: 204 YAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
YA+ G +D +K+++ + ++F ++ L+ D A + M AG
Sbjct: 371 YARDGLLDEAMELKSQMVKKGIKPDVF-TYTTLLSGFEKTGKDDYAMK--VFEEMRVAGC 427
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
+P+ T+ L+ + G+ + ++ + D + LAV G EVS
Sbjct: 428 QPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSG 487
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLV 377
+ M +AG P T+ L+ Y++ G D +I R + G +
Sbjct: 488 VF------------KEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPD 535
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISKIQPG 407
Y ++ ALA G E ++++++++ G
Sbjct: 536 LSTYNAVLAALARGGLWEQSEKVLAEMKDG 565
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
++ YN+L+ +Y EH D L ++ ++G++P+ +IS + +I YC++G ++
Sbjct: 676 LTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPD------IISFNTVIFAYCRNGRMKE 729
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A++I M+D +N I ++ + A ++ M + G +P+ TY L+
Sbjct: 730 ASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLID 789
Query: 203 GYAKHGDMDSIKTKIPSLK 221
+ K D + I +L+
Sbjct: 790 WFCKLNRRDEASSFISNLR 808
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 117/308 (37%), Gaps = 42/308 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP DI +N LL V+ N + +++ G P R T+ LIS Y + G
Sbjct: 463 VP-DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS------AYSRCG 515
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A I M D +NA++ ++ +E +L M +P+ TY
Sbjct: 516 FFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYC 575
Query: 199 KLMCGYAKHGD---MDSIKTKIPS--LKPQSELFLCFSFQLTNLLILVSSDMAS-AEGIL 252
L+ YA + M ++ +I S ++PQ+ L T +L+ SD+ + E
Sbjct: 576 SLLHAYANGKEVERMSALAEEIYSGIIEPQAVLL------KTLVLVYSKSDLLTETERAF 629
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKH---GDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+ + G P T ++ Y + + + + SG + Y +++ + +
Sbjct: 630 LELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRT 689
Query: 310 GHGEYIDEV----------SAIVCFVNICFHWLEGPMMSQA----------GLEPSAQTY 349
H E +++ I+ F + F + M +A GL P TY
Sbjct: 690 EHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITY 749
Query: 350 TKLMCGYA 357
+ YA
Sbjct: 750 NTFIASYA 757
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 94/254 (37%), Gaps = 22/254 (8%)
Query: 117 NRVTYQQLISNSK---LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
NR + ++SNS +IS ++G A +L +R+ I + +LI ++
Sbjct: 175 NREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNG 234
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG-DMDSIKTKIPSLKPQSELFLCFSF 232
A + + + G P+ TY ++ Y K G I + S+K +++
Sbjct: 235 RYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTY 294
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ--- 289
S A + M AG P TY L+ Y K +L +
Sbjct: 295 NTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEA 354
Query: 290 SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY 349
SG + Y +I A A G +DE + M + G++P TY
Sbjct: 355 SGFAPSIVTYNSLISAYARDG---LLDEAMEL------------KSQMVKKGIKPDVFTY 399
Query: 350 TKLMCGYAKHGDMD 363
T L+ G+ K G D
Sbjct: 400 TTLLSGFEKTGKDD 413
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 149/365 (40%), Gaps = 55/365 (15%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-----------SK 129
LD+ Y +L+ + ++ + K+E +G +P +TY +++ +
Sbjct: 206 LDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITS 265
Query: 130 LISKY------------------CQDGNI-EGATKILEFMRDKTFPISEGVFNALIYGHS 170
L+ K C+ G++ + A ++ E M+ F + +NAL+ +
Sbjct: 266 LVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYG 325
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELF 227
+++ A +L M G PS TY L+ YA+ G +D +K ++ + ++
Sbjct: 326 KSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV- 384
Query: 228 LCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
F T LL + + SA I M AG +P+ T+ + Y G + +
Sbjct: 385 ----FTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMK 440
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ + ++ D + LAV G EVS + M +AG P
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF------------KEMKRAGFVPE 488
Query: 346 AQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIIS 402
+T+ L+ Y++ G + ++ R + G + Y ++ ALA G E +++++
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 403 KIQPG 407
+++ G
Sbjct: 549 EMEDG 553
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 115/285 (40%), Gaps = 36/285 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YNALL VY + L ++E G P+ VTY + LIS Y +DG ++
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTY------NSLISAYARDGMLD 366
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ M +K + L+ G +A + SA I M AG +P+ T+ +
Sbjct: 367 EAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFI 426
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCF----SFQLTNLLILVSSDMASAE--GILTMM 255
Y G + +K E+ +C LL + + +E G+ M
Sbjct: 427 KMYGNRGKF------VDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
+AG P +T+ L+ Y++ G + +V R + +G + Y ++ ALA G
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
E ++V A M +P+ TY L+ YA
Sbjct: 541 EQSEKVLA---------------EMEDGRCKPNELTYCSLLHAYA 570
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 80/179 (44%), Gaps = 6/179 (3%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
++L+ +G P+ T + ++S Y + + A ++L++M+++ F S +N+L
Sbjct: 617 FSELKERGFSPDITTL------NSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSL 670
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
+Y HS++ D +E IL + G++P +Y ++ Y ++ M ++
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGI 730
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ ++ S A G++ M + G P+ TY ++ GY K D +
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 66/139 (47%), Gaps = 6/139 (4%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
++ YN+L+ ++ + + L ++ ++GI+P+ ++Y + +I YC++ +
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISY------NTVIYAYCRNTRMRD 717
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A++I MRD +N I ++ + A G++ M + G P+ TY ++
Sbjct: 718 ASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVD 777
Query: 203 GYAKHGDMDSIKTKIPSLK 221
GY K D K + L+
Sbjct: 778 GYCKLNRKDEAKLFVEDLR 796
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 125/343 (36%), Gaps = 64/343 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI +N LL V+ N + +++ G P R T+ + LIS Y + G+ E
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF------NTLISAYSRCGSFE 506
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M D +N ++ ++ +E +L M +P+ TY L+
Sbjct: 507 QAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 202 CGYAKH---GDMDSIKTKIPS--LKPQSELF-----LC--------------------FS 231
YA G M S+ ++ S ++P++ L +C FS
Sbjct: 567 HAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFS 626
Query: 232 FQLTNLLILVS-----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+T L +VS + A +L M + G PS TY LM +++ D +
Sbjct: 627 PDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI 686
Query: 287 LAQSGSSLVNGD---YLDIIHALAVSGH--------GEYIDE--VSAIVCFVNICFHWLE 333
L + + + D Y +I+A + E D V ++ + +
Sbjct: 687 LREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAA 746
Query: 334 GPMMSQA----------GLEPSAQTYTKLMCGYAKHGDMDSIR 366
M +A G P+ TY ++ GY K D +
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 114/280 (40%), Gaps = 24/280 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN ++ + + +++ Q +P T+ +I + + G ++
Sbjct: 157 DVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHG------FARKGEMK 210
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + MR + +NALI G + M AE IL M+ AG+ P+ TYT +M
Sbjct: 211 KALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIM 270
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYA GD L+ + ++++ S M SA + MS +
Sbjct: 271 HGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIP 330
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
+ Y L+ G+A+ GD+ L+ Q V D Y I+A + +G + +
Sbjct: 331 RNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKT 390
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
M G++P+ +TYT L+ G+A+
Sbjct: 391 I---------------EEMKSVGVKPNVKTYTTLINGWAR 415
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 102/289 (35%), Gaps = 63/289 (21%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTD----FLAKLESQGIEPNRVTYQQLISNSKLIS 132
+D P+DI H +D D + + G+ P+ +TY LI+
Sbjct: 49 IDAPIDIYH------TMMDGYTMVGDEDKCLLVFERFKECGLNPSVITY------GCLIN 96
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
Y + G + A ++ + M + ++ LI G + D A+A I + + G++P
Sbjct: 97 LYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKP 156
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
Y ++ + G MD + ++ Q +F +M A +
Sbjct: 157 DVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVF 216
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
MM +G P+ TY L+ G + M+ ++L
Sbjct: 217 DMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQIL------------------------- 251
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
DE M+ AG+ P+ TYT +M GYA GD
Sbjct: 252 ---DE-------------------MTLAGVSPNEHTYTTIMHGYASLGD 278
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 108/273 (39%), Gaps = 29/273 (10%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I YCQ N++ A ++ M ++ +++ ++ G++ D + + G
Sbjct: 24 IIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECG 83
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMA 246
L PS TY L+ YAK G + + K + + + ++LI L D A
Sbjct: 84 LNPSVITYGCLINLYAKLG---KVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWA 140
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD----SVRRLLAQSGSSLVNGDYLDI 302
+A I + + G++P Y ++ + G MD +V+ + Q ++ I
Sbjct: 141 NAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTR-TFMPI 199
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
IH A G + A+ F MM +G P+ TY L+ G + M
Sbjct: 200 IHGFARKGEMK-----KALDVF----------DMMRMSGCIPTVHTYNALILGLVEKRKM 244
Query: 363 DSIRRLLAQ---NGSSLVNGDYLDIIHALAVSG 392
+ ++L + G S Y I+H A G
Sbjct: 245 EKAEQILDEMTLAGVSPNEHTYTTIMHGYASLG 277
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 14/163 (8%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD+ Y ALL+ + S ++ +Q I N Y LI + + G++
Sbjct: 296 LDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDG------WARRGDV 349
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A +++ M+ + + + I S+A DM A + M G++P+ +TYT L
Sbjct: 350 WEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTL 409
Query: 201 MCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL 238
+ G+A+ + + K+ LKP ++ C +T+LL
Sbjct: 410 INGWARASLPEKALSCFEEMKLSGLKPDRAVYHCL---MTSLL 449
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 93/220 (42%), Gaps = 28/220 (12%)
Query: 151 RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210
++K ++ ++ +IY + Q +M AE ++ M + G++ Y +M GY GD
Sbjct: 10 KEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDE 69
Query: 211 DSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
D + K L P + C L NL + ++ A + M AG++ + +
Sbjct: 70 DKCLLVFERFKECGLNPSVITYGC----LINLYAKLGK-VSKALEVSKEMEHAGIKHNMK 124
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIV 322
TY+ L+ G+ K D + + + D Y +II A G ++ V
Sbjct: 125 TYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMG------KMDRAV 178
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
C V M + +P+ +T+ ++ G+A+ G+M
Sbjct: 179 CTVK---------EMQKQRHKPTTRTFMPIIHGFARKGEM 209
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
++P + YN L+ + + D + +++ +G++P+ TY I+ +
Sbjct: 328 NIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACS------KA 381
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G+++ ATK +E M+ + + LI G ++A+ A M +GL+P Y
Sbjct: 382 GDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVY 441
Query: 198 TKLM 201
LM
Sbjct: 442 HCLM 445
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 126/313 (40%), Gaps = 82/313 (26%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL------------- 124
+V ++ YN L+R + + ++ + + K+ + G++P+ VTY +
Sbjct: 208 NVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQA 267
Query: 125 ------ISNSK----------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ NS +I YC++G I+ A + + M+D + VFN+LI G
Sbjct: 268 EGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKG 327
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
A D +LT+M + G++P T++ +M ++ G MD + E+F
Sbjct: 328 FIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCR----------EIF- 376
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
DM A ++P A Y+ L GY + G+ + +L
Sbjct: 377 --------------DDMVKAR----------IQPDAHVYSILAKGYVRAGEPEKAEEILN 412
Query: 289 QSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
S + + + II+ +G EY AI F +C + G+ P+
Sbjct: 413 AMIKSGFHPNVVIFTTIINGWCSAGRMEY-----AIKIFEKMC----------ECGIAPN 457
Query: 346 AQTYTKLMCGYAK 358
+T+ L+ GY +
Sbjct: 458 LKTFETLIWGYGE 470
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 146/352 (41%), Gaps = 45/352 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y LL +H S ++++E G+EP+ + + + +I+ + + GN++ A K
Sbjct: 110 YTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFF------NAVINAFSESGNMQEAMK 163
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ-AGLEPSAQTYTKLMCGY 204
M++ + FN LI G+ A + ++ +L +MSQ + P+ +TY L+ +
Sbjct: 164 YFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAW 223
Query: 205 AKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
++ K L+P + ++ + + + AEGI+ M +
Sbjct: 224 CNKKNIMKAWNVVYKMVASGLQPDA-----VTYNTIATAYAQNGEASQAEGIILEMQNSN 278
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG-----------SSLVNGDYLDIIHALAV 308
++P+ +T ++ GY K G + + + + +SL+ G ++D + V
Sbjct: 279 VQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKG-FIDAVDRDGV 337
Query: 309 SGHGEYIDEVSA---IVCFVNICFHWLEGPMMS----------QAGLEPSAQTYTKLMCG 355
+ ++E ++ F I W M +A ++P A Y+ L G
Sbjct: 338 NEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKG 397
Query: 356 YAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI 404
Y + G+ + +L S + + + II+ +G EY +I K+
Sbjct: 398 YVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKM 449
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 150/370 (40%), Gaps = 61/370 (16%)
Query: 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
++ + + + S +KL++ + G + IL+ + + S + L+ +
Sbjct: 65 SKTSCRTVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFD 124
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFS 231
S I++ + + G+EP + + ++ +++ G+M K K KP + F
Sbjct: 125 SIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTF---- 180
Query: 232 FQLTNLLIL---VSSDMASAEGILTMMSQ-AGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
N LI ++ + ++ +L +MSQ + P+ +TY L+ + ++ ++
Sbjct: 181 ----NTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVV 236
Query: 288 AQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV-----------SAIVCFVNICFHWLE 333
+ +S + D Y I A A +G + + + C + I + E
Sbjct: 237 YKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKE 296
Query: 334 GPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---Y 381
G + M GL+P+ + L+ G+ D D + +L V D +
Sbjct: 297 GKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITF 356
Query: 382 LDIIHALAVSGHGEYIDEII-----SKIQPGVGYSADAANHIYHLINKGQIDA-----AY 431
I++A + +G + EI ++IQP DA H+Y ++ KG + A A
Sbjct: 357 STIMNAWSAAGFMDKCREIFDDMVKARIQP------DA--HVYSILAKGYVRAGEPEKAE 408
Query: 432 RIVNTLARSA 441
I+N + +S
Sbjct: 409 EILNAMIKSG 418
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y+ L + Y+ + L + G PN V + + +I+ +C G +E
Sbjct: 387 DAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIF------TTIINGWCSAGRME 440
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
A KI E M + + F LI+G+ +A +E +L +M + ++P T
Sbjct: 441 YAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTT 495
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 120/298 (40%), Gaps = 34/298 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y L++ +++ LA+++ G+ N TY LI+ ++ + C+ G
Sbjct: 455 NVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVG--- 511
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
++L+ + F + +N++I G +A M SA + M G+ P+ TYT +
Sbjct: 512 ---EMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFI 568
Query: 202 CGYAKHGDMD-SIK----TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
GY K D ++K + L+P + + +M+ A +L +M
Sbjct: 569 DGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQ-----EGNMSHALQVLVLML 623
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGE 313
+ GL P+ Y + GY M+ R + + G L Y +I + G
Sbjct: 624 KDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDG--- 680
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
N+ F M G P T+T L G ++GD+D R+LL +
Sbjct: 681 ------------NVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDE 726
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 140/372 (37%), Gaps = 41/372 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L+ + K+ G++P VTY L+ YC +G ++
Sbjct: 385 DAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLC------YCVNGCMD 438
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ M K F + + L+ GH A +L M Q G+ + TY L+
Sbjct: 439 EAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLI 498
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAG 259
G G + + + ++E F+ + +++ + + M SA + M G
Sbjct: 499 NGLCVVGRVCEVGEMLKRF--ETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKG 556
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYID 316
+ P+ TYT + GY K D ++L + D Y +I+ G+ +
Sbjct: 557 IPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHAL 616
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNG 373
+V + M + GL P+ Y + GY M+ R + + G
Sbjct: 617 QVLVL---------------MLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEG 661
Query: 374 SSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHI------YHLINKGQI 427
L Y +I + G+ + ++ S++ + +HI + L G I
Sbjct: 662 IDLDTATYTTLIDGFSKDGNVTFALKLYSEMVA----KGNIPDHITFTALTHGLCRNGDI 717
Query: 428 DAAYRIVNTLAR 439
D A ++++ + R
Sbjct: 718 DDARKLLDEMNR 729
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 103/273 (37%), Gaps = 43/273 (15%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D + G+ P VTY LI ++G E A ++ MRD S FN
Sbjct: 303 DIFEETLRDGLVPTDVTYTVLIRGCT------EEGMPEKAYELCRQMRDHGLLPSTNEFN 356
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSIKTKI--- 217
+I G A + M+ +G+ P A TY L +C K + ++ K+
Sbjct: 357 MVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNET 415
Query: 218 ---PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
P + L LC+ V+ M A + T M G P+ TYT LM G+
Sbjct: 416 GVKPYIVTYHSLLLCYC---------VNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGH 466
Query: 275 AKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
D LLA Q+G S + Y +I+ L V G VC V
Sbjct: 467 INKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGR----------VCEVGEMLKR 516
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
E G P+A TY ++ G+ K G M S
Sbjct: 517 FE-----TEGFVPTAMTYNSIINGFIKAGMMGS 544
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 126/313 (40%), Gaps = 82/313 (26%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL------------- 124
+V ++ YN L+R + + ++ + + K+ + G++P+ VTY +
Sbjct: 208 NVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQA 267
Query: 125 ------ISNSK----------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ NS +I YC++G I+ A + + M+D + VFN+LI G
Sbjct: 268 EGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKG 327
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
A D +LT+M + G++P T++ +M ++ G MD + E+F
Sbjct: 328 FIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCR----------EIF- 376
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
DM A ++P A Y+ L GY + G+ + +L
Sbjct: 377 --------------DDMVKAR----------IQPDAHVYSILAKGYVRAGEPEKAEEILN 412
Query: 289 QSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
S + + + II+ +G EY AI F +C + G+ P+
Sbjct: 413 AMIKSGFHPNVVIFTTIINGWCSAGRMEY-----AIKIFEKMC----------ECGIAPN 457
Query: 346 AQTYTKLMCGYAK 358
+T+ L+ GY +
Sbjct: 458 LKTFETLIWGYGE 470
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 146/352 (41%), Gaps = 45/352 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y LL +H S ++++E G+EP+ + + + +I+ + + GN++ A K
Sbjct: 110 YTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFF------NAVINAFSESGNMQEAMK 163
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ-AGLEPSAQTYTKLMCGY 204
M++ + FN LI G+ A + ++ +L +MSQ + P+ +TY L+ +
Sbjct: 164 YFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAW 223
Query: 205 AKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
++ K L+P + ++ + + + AEGI+ M +
Sbjct: 224 CNKKNIMKAWNVVYKMVASGLQPDA-----VTYNTIATAYAQNGEASQAEGIILEMQNSN 278
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG-----------SSLVNGDYLDIIHALAV 308
++P+ +T ++ GY K G + + + + +SL+ G ++D + V
Sbjct: 279 VQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKG-FIDAVDRDGV 337
Query: 309 SGHGEYIDEVSA---IVCFVNICFHWLEGPMMS----------QAGLEPSAQTYTKLMCG 355
+ ++E ++ F I W M +A ++P A Y+ L G
Sbjct: 338 NEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKG 397
Query: 356 YAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI 404
Y + G+ + +L S + + + II+ +G EY +I K+
Sbjct: 398 YVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKM 449
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 150/370 (40%), Gaps = 61/370 (16%)
Query: 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
++ + + + S +KL++ + G + IL+ + + S + L+ +
Sbjct: 65 SKTSCRTVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFD 124
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFS 231
S I++ + + G+EP + + ++ +++ G+M K K KP + F
Sbjct: 125 SIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTF---- 180
Query: 232 FQLTNLLIL---VSSDMASAEGILTMMSQ-AGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
N LI ++ + ++ +L +MSQ + P+ +TY L+ + ++ ++
Sbjct: 181 ----NTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVV 236
Query: 288 AQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV-----------SAIVCFVNICFHWLE 333
+ +S + D Y I A A +G + + + C + I + E
Sbjct: 237 YKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKE 296
Query: 334 GPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---Y 381
G + M GL+P+ + L+ G+ D D + +L V D +
Sbjct: 297 GKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITF 356
Query: 382 LDIIHALAVSGHGEYIDEII-----SKIQPGVGYSADAANHIYHLINKGQIDA-----AY 431
I++A + +G + EI ++IQP DA H+Y ++ KG + A A
Sbjct: 357 STIMNAWSAAGFMDKCREIFDDMVKARIQP------DA--HVYSILAKGYVRAGEPEKAE 408
Query: 432 RIVNTLARSA 441
I+N + +S
Sbjct: 409 EILNAMIKSG 418
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y+ L + Y+ + L + G PN V + + +I+ +C G +E
Sbjct: 387 DAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIF------TTIINGWCSAGRME 440
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
A KI E M + + F LI+G+ +A +E +L +M + ++P T
Sbjct: 441 YAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTT 495
>gi|297792331|ref|XP_002864050.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
gi|297309885|gb|EFH40309.1| EMB1006 [Arabidopsis lyrata subsp. lyrata]
Length = 723
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 101/241 (41%), Gaps = 56/241 (23%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ +C +G E A I M K + V+N L+ ++++N + EG+ + G
Sbjct: 350 LVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFAEIKAKG 409
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
L+P+A TY LM YA+ D ++T
Sbjct: 410 LKPTAATYNILMDAYARRMQPDIVET---------------------------------- 435
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-----DSVRRLLAQSGSSLVNGDYLDIIH 304
+L M GLEP+ +++T L+ Y + M D+ R + + G + Y +IH
Sbjct: 436 -LLREMEDLGLEPNVKSFTCLISAYGRTKKMSDMAADAFLR-MKKVGLKPSSHSYTALIH 493
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
A +VSG E A F + W+E G++PS +TYT L+ + + GD +
Sbjct: 494 AYSVSGWHE-----KAYASFEEM---WME-------GIKPSVETYTSLLDAFRRSGDTEK 538
Query: 365 I 365
+
Sbjct: 539 L 539
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 117/309 (37%), Gaps = 61/309 (19%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ Y + H A+++++G++P TY + L+ Y + +
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFAEIKAKGLKPTAATY------NILMDAYARRMQPDIVET 435
Query: 146 ILEFMRDKTFPISEGVFNALI--YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+L M D + F LI YG ++ +A+ L M + GL+PS+ +YT L+
Sbjct: 436 LLREMEDLGLEPNVKSFTCLISAYGRTKKMSDMAADAFLR-MKKVGLKPSSHSYTALIHA 494
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
Y+ VS A M G++PS
Sbjct: 495 YS-----------------------------------VSGWHEKAYASFEEMWMEGIKPS 519
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVSAIV 322
+TYT L+ + + GD + + + + G + L + G YI+ +
Sbjct: 520 VETYTSLLDAFRRSGDTEKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVS 579
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD-- 380
F G M GL+PS TY LM YA+ G + +LL + + + D
Sbjct: 580 EF---------GKM----GLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSI 626
Query: 381 -YLDIIHAL 388
Y +I+A
Sbjct: 627 TYSTMIYAF 635
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 109/280 (38%), Gaps = 43/280 (15%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS---NSKLISKYCQDGNIEG 142
YN L+ Y L ++E G+EPN ++ LIS +K +S D
Sbjct: 417 YNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSFTCLISAYGRTKKMSDMAADA---- 472
Query: 143 ATKILEFMRDKTFPI--SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
F+R K + S + ALI+ +S + A M G++PS +TYT L
Sbjct: 473 ------FLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMWMEGIKPSVETYTSL 526
Query: 201 MCGYAKHGDMDSI--------KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ + + GD + + + KI + L F L I A ++
Sbjct: 527 LDAFRRSGDTEKLMEIWKLMLREKIKGTRITYNTLLD-GFAKQGLYI-------EARDVV 578
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
+ + GL+PS TY LM YA+ G + +LL + + + D +
Sbjct: 579 SEFGKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSIT----------- 627
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
Y + A V + + MM ++G P ++Y KL
Sbjct: 628 -YSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 115/281 (40%), Gaps = 18/281 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y LL + DN S F +++E G P+ VT+ + L+ C+ GN
Sbjct: 327 DRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF------TILVDALCKAGNFG 380
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A L+ MRD+ + +N LI G + + + A + M G++P+A TY +
Sbjct: 381 EAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
Y K GD S +K + + + + + A+ I + GL
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P + TY +M Y+K G++D +LL++ + D + + + + +DE
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEA--- 557
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
W M + L+P+ TY L+ G K+G +
Sbjct: 558 ---------WKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 116/292 (39%), Gaps = 33/292 (11%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++E+ G++PN T+ I +++ + G I A +IL+ M D+ +
Sbjct: 245 LLKEMETLGLKPNVYTFTICI---RVLGR---AGKINEAYEILKRMDDEGCGPDVVTYTV 298
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
LI A + A+ + M +P TY L+ ++ + D+DS+K ++
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ +F + + + + A L +M G+ P+ TY L+CG + +D
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 285 RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF--------------VNICFH 330
L S V I + + +G+ D VSA+ F N +
Sbjct: 419 ELFGNMESLGVKPTAYTYI--VFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 331 WLEGPM-----------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
L + GL P + TY +M Y+K G++D +LL++
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE 528
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 121/295 (41%), Gaps = 48/295 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D++ YN LL Y + + ++ + E N +T+ +IS + GN++
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISG------LVKAGNVD 872
Query: 142 GATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A + + M D+ F + + LI G S++ + A+ + M G P+ Y L
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 201 MCGYAKHGDMDS--------IKTKI-PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
+ G+ K G+ D+ +K + P LK S L C L ++ D EG+
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDC-------LCMVGRVD----EGL 981
Query: 252 --LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSL-VNGD---YLDIIHA 305
+ ++GL P Y ++ G K ++ L + +S + D Y +I
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILN 1041
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
L ++G ++E I + +AGLEP+ T+ L+ GY+ G
Sbjct: 1042 LGIAGM---VEEAGKIY------------NEIQRAGLEPNVFTFNALIRGYSLSG 1081
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 88/230 (38%), Gaps = 22/230 (9%)
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G ++ A L MR+ F ++ +N LI+ ++ A + M G PS QTY
Sbjct: 167 GGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTY 226
Query: 198 TKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ LM G K D+DS+ + + LKP ++F + ++ + + A IL
Sbjct: 227 SSLMVGLGKRRDIDSVMGLLKEMETLGLKPN-----VYTFTICIRVLGRAGKINEAYEIL 281
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
M G P TYT L+ +D + + + + D + I L
Sbjct: 282 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDN 341
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+D V W E M + G P T+T L+ K G+
Sbjct: 342 RDLDSVKQF---------WSE---MEKDGHVPDVVTFTILVDALCKAGNF 379
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 134/327 (40%), Gaps = 34/327 (10%)
Query: 130 LISKYCQDGNIEGATKILE-FMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
+I C+ N+ GA + E F +D +N LI G +A+ + A+ + +
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKST 814
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASA 248
G P TY L+ Y K G +D ++ L + C + +T+ +++ S + A
Sbjct: 815 GCIPDVATYNFLLDAYGKSGKID----ELFELYKEMSTHECEANTITHNIVI--SGLVKA 868
Query: 249 EGI-------LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD 301
+ +MS P+A TY L+ G +K G + ++L L G +
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFE---GMLDYGCRPN 925
Query: 302 I-IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
I+ + ++G G+ + +A F M + G+ P +TY+ L+ G
Sbjct: 926 CAIYNILINGFGKAGEADAACALF----------KRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 361 DMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH 417
+D + S +N D Y II+ L S E + ++++ G + D +
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTY 1035
Query: 418 IYHLIN---KGQIDAAYRIVNTLARSA 441
++N G ++ A +I N + R+
Sbjct: 1036 NSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 109/272 (40%), Gaps = 35/272 (12%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
L+ G+ P+ VTY ++ Y + G I+ A K+L M + V N+LI
Sbjct: 494 LKDIGLVPDSVTYNMMMKC------YSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---------KTKIPS 219
+A+ + A + M + L+P+ TY L+ G K+G + K P+
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
+ LF C + + ++ A +L M G P TY ++ G K+G
Sbjct: 608 TITFNTLFDC---------LCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVC-FVNIC------FHW- 331
+ Q LV D++ + L I++ I+ F+ C W
Sbjct: 659 VKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWE 717
Query: 332 -LEGPMMSQAGLEPSAQTYTKLMC-GYAKHGD 361
L G ++++AG++ + +L+ G + GD
Sbjct: 718 DLIGSILAEAGIDNAVSFSERLVANGICRDGD 749
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 69/191 (36%), Gaps = 12/191 (6%)
Query: 181 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL 240
+ +M + ++ TY + + G + + ++ + +S+ L+L
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 241 VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL 300
S A + M G PS QTY+ LM G K D+DSV LL + + + +
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+ V G I+E I+ M G P TYT L+
Sbjct: 260 TFTICIRVLGRAGKINEAYEIL------------KRMDDEGCGPDVVTYTVLIDALCTAR 307
Query: 361 DMDSIRRLLAQ 371
+D + + +
Sbjct: 308 KLDCAKEVFEK 318
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 157/376 (41%), Gaps = 49/376 (13%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
G+L + + Y L+ N + K++ G+ PN TY +++ +
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN------QL 278
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C+DG + A ++ + MR++ + +N LI G + + A ++ M G+ P+
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS-----SDMASAE 249
TY L+ G+ G + + LK + S L ILVS D + A
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRG-----LSPSLVTYNILVSGFCRKGDTSGAA 393
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL-LAQSGSSLVNG--DYLDIIHAL 306
++ M + G++PS TYT L+ +A+ +M+ +L L+ LV Y +IH
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
+ G ++E S + M + EP+ Y ++ GY K G
Sbjct: 454 CIKGQ---MNEASRLF------------KSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 367 RLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQ 426
+LL + + A V+ + Y+ E++ K + S +A + +I+ G
Sbjct: 499 KLLKEMEEKEL---------APNVASY-RYMIEVLCKERK----SKEAERLVEKMIDSG- 543
Query: 427 IDAAYRIVNTLARSAN 442
ID + I++ ++R+ N
Sbjct: 544 IDPSTSILSLISRAKN 559
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 118/328 (35%), Gaps = 41/328 (12%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V LD+ + L++ + D L +L G PN V Y LI C+ G
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGC------CKKG 212
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
IE A + M +E + LI G + + M + G+ P+ TY
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN 272
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMM 255
+M K G K E + + N LI + A ++ M
Sbjct: 273 CVMNQLCKDG---RTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 256 SQAGLEPSAQTYTKLM---CGYAKHGDMDSVRRLLAQSG--SSLVNGDYL--DIIHALAV 308
G+ P+ TY L+ CG K G S+ R L G SLV + L
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD-SIRR 367
SG + + E M + G++PS TYT L+ +A+ +M+ +I+
Sbjct: 390 SGAAKMVKE-------------------MEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Query: 368 LLAQNGSSLVNG--DYLDIIHALAVSGH 393
L+ LV Y +IH + G
Sbjct: 431 RLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 67/323 (20%), Positives = 127/323 (39%), Gaps = 35/323 (10%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI C+ G IE + +L + + F + ++ LI G + ++ A+ + M + G
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS-----IKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
L + +TYT L+ G K+G K + + P + C QL
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCK-----DGR 283
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLD 301
A + M + G+ + TY L+ G + ++ +++ Q S +N + Y
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+I G G+ +S +C + GL PS TY L+ G+ + GD
Sbjct: 344 LIDGFC--GVGKLGKALS-------LCRD------LKSRGLSPSLVTYNILVSGFCRKGD 388
Query: 362 MDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH- 417
++ + + G Y +I A S + E ++ ++ +G D +
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEE-LGLVPDVHTYS 447
Query: 418 --IYHLINKGQIDAAYRIVNTLA 438
I+ KGQ++ A R+ ++
Sbjct: 448 VLIHGFCIKGQMNEASRLFKSMV 470
>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 924
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 114/280 (40%), Gaps = 24/280 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN ++R + + +++ + P T+ +I + + G ++
Sbjct: 550 DVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHG------FARAGEMK 603
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + MR + FNALI G + M A IL M+ AG+ P+ TYT +M
Sbjct: 604 RALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIM 663
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYA GD L+ + ++++ S M SA + MS +
Sbjct: 664 HGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIP 723
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
+ Y L+ G+A+ GD+ L+ Q V D Y I+A +G D +
Sbjct: 724 RNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAG-----DML 778
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
A M +G++P+ +TYT L+ G+A+
Sbjct: 779 RASKMMEE----------METSGVKPNVKTYTTLIHGWAR 808
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 119/285 (41%), Gaps = 34/285 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +L+ Y K++ +G+E + VTY S ++ + + GN + A +
Sbjct: 344 YTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTY------SIIVGGFAKIGNADAADR 397
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ +D+ ++ ++ +IY + Q +M AE ++ M G++ Y +M GY
Sbjct: 398 WFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYT 457
Query: 206 KHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
G+ + T LK P + C L NL V ++ A + MM AG+
Sbjct: 458 MVGNEEKCLTVFERLKECGFAPSVVSYGC----LINLYAKVGK-ISKALEVSKMMESAGI 512
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
+ + +TY+ L+ G+ K D + + + D Y +II A G
Sbjct: 513 KHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMG------T 566
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ +C V M + P+++T+ ++ G+A+ G+M
Sbjct: 567 MDRAICMVK---------EMQKERHRPTSRTFMPIIHGFARAGEM 602
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 99/235 (42%), Gaps = 18/235 (7%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++S Y + G++ A + E MR + + V+ +LI+ ++ DM A M + G
Sbjct: 312 MVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEG 371
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+E S TY+ ++ G+AK G+ D+ K + + + +M AE
Sbjct: 372 VEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAE 431
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHAL 306
++ M G++ Y +M GY G+ + +V L + G + Y +I+
Sbjct: 432 ALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLY 491
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
A G EVS MM AG++ + +TY+ L+ G+ K D
Sbjct: 492 AKVGKISKALEVSK---------------MMESAGIKHNMKTYSMLINGFLKLKD 531
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 18/189 (9%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD+ Y ALL+ + S ++ +Q I N Y LI + + G++
Sbjct: 689 LDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDG------WARRGDV 742
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A +++ M+ + + I +A DM A ++ M +G++P+ +TYT L
Sbjct: 743 WEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTL 802
Query: 201 MCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE-GILTM 254
+ G+A+ + + K+ LKP ++ C +T LL + A GIL++
Sbjct: 803 IHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCL---MTALLSRATVTEAYVRPGILSI 859
Query: 255 ---MSQAGL 260
M ++GL
Sbjct: 860 CKEMIESGL 868
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 81/171 (47%), Gaps = 24/171 (14%)
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
+PS + Y ++ YA+ GDM R+ + G + Y +IHA AV G ++E
Sbjct: 303 KPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAV---GRDMEE 359
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL--AQNGSS 375
A+ C M + G+E S TY+ ++ G+AK G+ D+ R A++ S
Sbjct: 360 --ALSC----------ARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHS 407
Query: 376 LVNG-DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
+N Y ++I+A + + + + ++ +++ G DA IYH + G
Sbjct: 408 HMNAIIYGNMIYAYCQTCNMDQAEALVREME---GEGIDAPIDIYHTMMDG 455
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
++P + YN L+ + + D + +++ G++P+ TY + I+ C+
Sbjct: 721 NIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTY------TSFINACCKA 774
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G++ A+K++E M + + LI+G ++A+ A M AGL+P Y
Sbjct: 775 GDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVY 834
Query: 198 TKLM 201
LM
Sbjct: 835 HCLM 838
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 41/204 (20%)
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLL--ILVSS 243
+PS + Y ++ YA+ GDM + S++ P S ++ T+L+ V
Sbjct: 303 KPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVY-------TSLIHAYAVGR 355
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG------SSLVNG 297
DM A M + G+E S TY+ ++ G+AK G+ D+ R ++ ++++ G
Sbjct: 356 DMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKDRHSHMNAIIYG 415
Query: 298 DY---------LDIIHALAVSGHGEYID----------EVSAIVCFVNICFHWLEGPMMS 338
+ +D AL GE ID + +V C E +
Sbjct: 416 NMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFE--RLK 473
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDM 362
+ G PS +Y L+ YAK G +
Sbjct: 474 ECGFAPSVVSYGCLINLYAKVGKI 497
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 106/273 (38%), Gaps = 69/273 (25%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
++ GI PN Y + LIS+YC DG ++ A K+ MR+K +N LI G
Sbjct: 254 MKRSGIVPNAYAY------NCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
+ A ++ +++ GL P+ TY L+ G+ MD
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMD----------------- 350
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK----HGDMDSVR 284
SA + + +GL P+ TY L+ GY+K G +D V+
Sbjct: 351 ------------------SAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVK 392
Query: 285 ----RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
R +A S + Y +I A A H E E+ + +M ++
Sbjct: 393 EMEERCIAPSKVT-----YTILIDAFARLNHTEKACEMHS---------------LMEKS 432
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
GL P TY+ L+ G HG+M +L G
Sbjct: 433 GLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLG 465
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 44/213 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN L+ + D S +L+S G+ P VTY LI+ Y + N+
Sbjct: 332 NIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAG------YSKVENLA 385
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA +++ M ++ S+ + LI ++ N A + ++M ++GL P TY+ L+
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLL 445
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G HG+M K S+LF + + L+
Sbjct: 446 HGLCVHGNM----------KEASKLF-------------------------KSLGEMHLQ 470
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL---AQSG 291
P++ Y ++ GY K G RLL QSG
Sbjct: 471 PNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSG 503
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 12/209 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ Y ++ A++ +GI +TY LI C+ A K
Sbjct: 266 YNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG------LCRGKKFGEAVK 319
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
++ + + +N LI G M SA + + +GL P+ TY L+ GY+
Sbjct: 320 LVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYS 379
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MSQAGLEP 262
K ++++ + +K E + S +LI + + E M M ++GL P
Sbjct: 380 K---VENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVP 436
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
TY+ L+ G HG+M +L G
Sbjct: 437 DVYTYSVLLHGLCVHGNMKEASKLFKSLG 465
Score = 46.2 bits (108), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 94/249 (37%), Gaps = 53/249 (21%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I C+ G ++L + + + ++ LI G + ++ A+ + M++ G
Sbjct: 164 MIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLG 223
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
L P+ TY+ LM G+ K G Q E FQ+
Sbjct: 224 LVPNPHTYSVLMNGFFKQG-------------LQRE-----GFQMYE------------- 252
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHAL 306
M ++G+ P+A Y L+ Y G +D ++ A + G + Y +I L
Sbjct: 253 ----NMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGL 308
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G+ E +V VN + GL P+ TY L+ G+ MDS
Sbjct: 309 C---RGKKFGEAVKLVHKVN------------KVGLSPNIVTYNILINGFCDVRKMDSAV 353
Query: 367 RLLAQNGSS 375
RL Q SS
Sbjct: 354 RLFNQLKSS 362
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 11/147 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ + HT + + +E G+ P+ TY S L+ C GN++ A+K
Sbjct: 406 YTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTY------SVLLHGLCVHGNMKEASK 459
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK---LMC 202
+ + + + + ++N +I+G+ + A +L M Q+G+ P+ ++ L+C
Sbjct: 460 LFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLC 519
Query: 203 GYAKHGDMDSIKTKI--PSLKPQSELF 227
K + + + ++ LKP L+
Sbjct: 520 RDEKWKEAELLLGQMINSGLKPSVSLY 546
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 167/418 (39%), Gaps = 47/418 (11%)
Query: 42 LVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFS 101
LV V +NS+ C+ G D F E V D YN L+ + +T
Sbjct: 45 LVTYNVLINSR-CNAGEFGKA----LDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEG 99
Query: 102 PTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV 161
L+++ + I N TY +I + ++ E + K+LE M
Sbjct: 100 ARKLLSEMRDKNIAANVFTYSSIIKS------LVKEAKPEESYKVLEEMMAAGCNPDVFA 153
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
FN ++ G +++N+M A + M ++G +P +Y L+ G AK G +D SLK
Sbjct: 154 FNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDE------SLK 207
Query: 222 PQSELFLCFSFQLTNLL--------ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCG 273
SE+ + + + N++ + + ++ A + M +AG +P+ TYT L+ G
Sbjct: 208 ILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAG 267
Query: 274 YAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFH 330
+ + R L + + + D Y +I G +DE
Sbjct: 268 LCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGS---MDEA-----------E 313
Query: 331 WLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHA 387
L M AGL+P+ T+ L+ G+ K G + L+A+ G+ + D Y +I
Sbjct: 314 KLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAG 373
Query: 388 LAVSGHGEYIDEIISKIQPGVGY--SADAANHIYHLINKGQIDAAYRIVNTLARSANI 443
L+ + + E+ +++ + + L G ID AY + +S +
Sbjct: 374 LSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAV 431
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 130/349 (37%), Gaps = 66/349 (18%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQG-IEPNRVTYQQLISNS 128
F E VP + YN L+ + D ++ + +EP+R TY LIS
Sbjct: 33 FETMKSESCVP-SLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISG- 90
Query: 129 KLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
C GN EGA K+L MRDK + ++++I + + +L M A
Sbjct: 91 -----LCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAA 145
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASA 248
G P + +M G+A+ S++M A
Sbjct: 146 GCNPDVFAFNGVMQGFAR-----------------------------------SNNMEKA 170
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG-----DYLDII 303
+ M ++G +P +Y L+ G AK G +D ++L++ + +I
Sbjct: 171 REVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLI 230
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
H L +G E EV G M+ +AG +P+ TYT L+ G + +
Sbjct: 231 HGLCRTGELEKALEVF--------------GSML-EAGCKPNKYTYTTLIAGLCRAEKVI 275
Query: 364 SIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVG 409
R L + + + D Y +I G + +++ ++ G G
Sbjct: 276 QARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAG 324
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 100/238 (42%), Gaps = 17/238 (7%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGIL-TMMSQA 188
++ + G + A ++ E M+ ++ S +N LI A + A + +M +
Sbjct: 16 VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASA 248
+EP TY L+ G G+ + + + ++ ++ F++ ++ + +
Sbjct: 76 RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHA 305
+L M AG P + +M G+A+ +M+ R + + +SG N Y +IH
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHG 195
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
LA G +DE I L M AG P+ T++ L+ G + G+++
Sbjct: 196 LAKIGK---LDESLKI----------LSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 130/320 (40%), Gaps = 86/320 (26%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+ Y + L + +G+EPN LIS + +I+ C++G ++
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPN------LISYNVVINGLCREGRMK 292
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ +L M + + + E +N LI G+ + + A + M + GL PS TYT L+
Sbjct: 293 EISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLI 352
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
K G+M+ A L M GL
Sbjct: 353 HSMCKAGNMN-----------------------------------RATEFLDQMRVRGLC 377
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSSLVNGDYLDIIHALAVSG 310
P+ +TYT L+ G+++ G M+ R+L + + ++L+NG H +A
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALING------HCIA--- 428
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRR 367
G+ +D ++ + M + GL P +Y+ ++ G+ + D+D ++R
Sbjct: 429 -GKMVDAIAVL-------------EDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 368 LLAQNG--------SSLVNG 379
+ G SSL+ G
Sbjct: 475 KMVAKGIKPDTITYSSLIQG 494
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 24/193 (12%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
T+FL ++ +G+ PN TY + L+ + Q G + A ++L+ M D F S +
Sbjct: 365 TEFLDQMRVRGLCPNERTY------TTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTY 418
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKI-- 217
NALI GH A M A +L M + GL P +Y+ ++ G+ + D+D +K K+
Sbjct: 419 NALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVA 478
Query: 218 PSLKPQ----SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCG 273
+KP S L F Q A + M + GL P TYT L+
Sbjct: 479 KGIKPDTITYSSLIQGFCEQ---------RRTKEACDLFDEMLRVGLPPDEFTYTALINA 529
Query: 274 YAKHGDMDSVRRL 286
Y GD+ +L
Sbjct: 530 YCMEGDLQKAIQL 542
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 107/282 (37%), Gaps = 53/282 (18%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD YN L++ Y + A++ G+ P+ +TY + LI C+ GN+
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITY------TSLIHSMCKAGNM 361
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
AT+ L+ MR + +E + L+ G SQ M A +L M G PS TY L
Sbjct: 362 NRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNAL 421
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ G+ ++ M A +L M + GL
Sbjct: 422 INGHC-----------------------------------IAGKMVDAIAVLEDMKEKGL 446
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
P +Y+ ++ G+ + D+D R+ + + + D I ++ + G E A
Sbjct: 447 TPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPD--TITYSSLIQGFCEQRRTKEA 504
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
F M + GL P TYT L+ Y GD+
Sbjct: 505 CDLF----------DEMLRVGLPPDEFTYTALINAYCMEGDL 536
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 120/293 (40%), Gaps = 34/293 (11%)
Query: 110 ESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
++ G P ++Y ++ ++ + SK NI A + + M + +N LI G
Sbjct: 161 QAHGFMPGVLSYNAVL-DATIRSKR----NISFAENVFKEMLQSQVSPNVFTYNILIRGF 215
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC 229
A ++ A M + G P+ TY L+ GY K +D + S+ +
Sbjct: 216 CLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNL 275
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
S+ + + M +LT M++ G TY L+ GY K G+ + A+
Sbjct: 276 ISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAE 335
Query: 290 ---SGSSLVNGDYLDIIHALAVSGH----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
G S Y +IH++ +G+ E++D+ M GL
Sbjct: 336 MLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQ-------------------MRVRGL 376
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGSSLVNGDYLDIIHALAVSG 392
P+ +TYT L+ G+++ G M+ R+L + NG S Y +I+ ++G
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAG 429
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 62/154 (40%), Gaps = 9/154 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK---------LIS 132
D+ Y+ L+ T L KL + P+ VTY LI N LI
Sbjct: 554 DVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C G + A ++ E M +K +N +I+GH + D+ A + M ++G
Sbjct: 614 GFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLL 673
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL 226
T L+ K G ++ + + I ++ EL
Sbjct: 674 HTVTVIALVKTLHKEGKVNELNSVIANVLRSCEL 707
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 73.6 bits (179), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 161/383 (42%), Gaps = 53/383 (13%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ + ++ + +++++GI PN VTY LI C G A++
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC------LCNYGRWSDASR 312
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M ++ + F+ALI + + AE + M + ++P TY+ L+ G+
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NLLI---LVSSDMASAEGILTMMSQAGLE 261
H +D K + + CF +T N LI + + + MSQ GL
Sbjct: 373 MHDRLDEAKHMFELMISKD----CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
+ TYT L+ G+ + + D+ + + Q S V D Y ++ L +G E
Sbjct: 429 GNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVE----- 483
Query: 319 SAIVCF--------------VNICFH-----------WLEGPMMSQAGLEPSAQTYTKLM 353
+A+V F NI W +S G++P+ TYT +M
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 543
Query: 354 CGYAKHG---DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGY 410
G+ + G + D++ R + + G +G Y +I A G E+I +++ +
Sbjct: 544 SGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS-CRF 602
Query: 411 SADAAN--HIYHLINKGQIDAAY 431
DA+ + ++++ G++D ++
Sbjct: 603 VGDASTIGLVTNMLHDGRLDKSF 625
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 121/308 (39%), Gaps = 34/308 (11%)
Query: 72 VHTGELDVPLDISH----YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
+ GE L ISH Y+ L+ + LAK+ G EP+ VT L++
Sbjct: 101 ISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNG 160
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+C I A ++ M + + FN LI+G + N + A ++ M
Sbjct: 161 ------FCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIP--SLKPQSELFLCFSFQLTNLLILVS 242
G +P TY ++ G K GD+D S+ K+ ++P ++ L N
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY----- 269
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI 302
++ A + T M G+ P+ TY L+ +G RLL+ +N + +
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 303 IHAL-AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+ A G+ ++ L M+ ++ ++P TY+ L+ G+ H
Sbjct: 330 SALIDAFVKEGKLVEA------------EKLYDEMIKRS-IDPDIFTYSSLINGFCMHDR 376
Query: 362 MDSIRRLL 369
+D + +
Sbjct: 377 LDEAKHMF 384
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 117/298 (39%), Gaps = 42/298 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N L+ + + ++ +G +P+ VTY +++ C+ G+I+ A
Sbjct: 189 FNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY------GIVVNGLCKRGDIDLALS 242
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL---MC 202
+L+ M ++N +I ++ A + T M G+ P+ TY L +C
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 203 GYAKHGDM-----DSIKTKI-PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y + D D I+ KI P++ S L F + + AE + M
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAF---------VKEGKLVEAEKLYDEMI 353
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRL--LAQSGSSLVNG-DYLDIIHALAVSGHGE 313
+ ++P TY+ L+ G+ H +D + + L S N Y +I +
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC---KAK 410
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+DE + MSQ GL + TYT L+ G+ + + D+ + + Q
Sbjct: 411 RVDEGMELF------------REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 6/115 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN ++ D L +G++PN VTY + ++S +C+ G E
Sbjct: 500 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY------TTMMSGFCRKGLKE 553
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
A + M+++ G +N LI H + D A++ ++ M A T
Sbjct: 554 EADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 608
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 134/308 (43%), Gaps = 37/308 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ ++ + + N A++ +G++PN VTY L+ + C+ G ++
Sbjct: 298 NVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGT------CKAGRLD 351
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M + P++ + L+ G + +A AE + +M +AG+ + YT L+
Sbjct: 352 DALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLI 411
Query: 202 CGYAKHGDMDSIKTKIPSLKPQS-----ELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
G+ + + + + + +K + L+ + L NL + A+ +L M
Sbjct: 412 HGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNL-----QKLDEAKSLLNKMD 466
Query: 257 QAGLEPSAQTYTKLM--CGYA-KHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
+ GL+P+ YT +M C A K + ++ + + SG Y ++ L +G
Sbjct: 467 ECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGS-- 524
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ-- 371
IDE + H+ + M GLEP+ Q YT L+ G K+G +D LL +
Sbjct: 525 -IDEAIS---------HFNK---MVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMI 571
Query: 372 -NGSSLVN 378
G SL N
Sbjct: 572 DKGMSLDN 579
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 125/318 (39%), Gaps = 49/318 (15%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VPL++ Y L+ D +E GI N + Y LI + + K
Sbjct: 365 VPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLI-HGHFVYK----- 418
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N E A +L M+DK + ++ ALI+G + A+ +L M + GL+P+ YT
Sbjct: 419 NSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYT 478
Query: 199 KLM--CGYA-KHGDMDSIKTKI--PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
+M C A K + ++ K+ +P + + + L S D A +
Sbjct: 479 NIMDACFKARKESEAIALLQKMMDSGFRPN---IVTYCALVDGLCKAGSIDEAISH--FN 533
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSG 310
M GLEP+ Q YT L+ G K+G +D LL + G SL N ++ + G
Sbjct: 534 KMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDN-----VVCTSLMDG 588
Query: 311 H---GEYIDEVSAIVCFVN----------ICFHW--LEGPMMSQA----------GLEPS 345
H G D + +N CF W M+ +A G+ P
Sbjct: 589 HLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPD 648
Query: 346 AQTYTKLMCGYAKHGDMD 363
A Y L+ K G+M+
Sbjct: 649 AVVYNCLINKCQKLGNME 666
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 117/291 (40%), Gaps = 37/291 (12%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI---- 217
FN +I + D+A A +L M G P TY L+ GY K G+++ ++ +
Sbjct: 197 FNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMR 256
Query: 218 -----PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
P + + L CF M A M + G+ + T++ +
Sbjct: 257 GCGCRPDVVTYNALVNCFC---------KFGRMERAYSYFAEMKREGVMANVVTFSTFVD 307
Query: 273 GYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWL 332
+ K+G + +L AQ + + ++ + V G + A+V L
Sbjct: 308 AFCKNGMVREAMKLFAQMRMKGMKPN--EVTYTCLVDGTCKAGRLDDALV---------L 356
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSSLVNGDYLDIIHALA 389
M+ Q G+ + TYT L+ G K G + + + RL+ + G Y +IH
Sbjct: 357 TNEMVQQ-GVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHF 415
Query: 390 VSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
V + E ++S+++ G D + + I+ L N ++D A ++N +
Sbjct: 416 VYKNSERALSLLSEMKDK-GMELDVSLYGALIWGLCNLQKLDEAKSLLNKM 465
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 23/157 (14%)
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
F+F + + D+A A +L M G P TY L+ GY K G+++ V +L+ +
Sbjct: 195 FTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGE 254
Query: 290 SGSSLVNGD---YLDIIHALAVSGHGE----YIDE------VSAIVCFVNICFHWLEGPM 336
D Y +++ G E Y E ++ +V F + + M
Sbjct: 255 MRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGM 314
Query: 337 MSQA----------GLEPSAQTYTKLMCGYAKHGDMD 363
+ +A G++P+ TYT L+ G K G +D
Sbjct: 315 VREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLD 351
>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 115/280 (41%), Gaps = 24/280 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN ++ + + + +++ + P T+ +I + + G +
Sbjct: 518 DVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHG------FARAGEMR 571
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + MR + +NALI G + MA A IL M+ AG+ P+ TYT LM
Sbjct: 572 RALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLM 631
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYA GD + L+ + ++++ S M SA + MS +
Sbjct: 632 QGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAKNIP 691
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
+ Y L+ G+A+ GD+ L+ Q V D Y ++A +G + E+
Sbjct: 692 RNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKAGDMQKATEI 751
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
M G++P+ +TYT L+ G+A+
Sbjct: 752 IQ---------------EMEAFGIKPNLKTYTTLINGWAR 776
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 120/313 (38%), Gaps = 64/313 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y+ L+ +L + + G++P+ V Y + +I+ +C N++
Sbjct: 483 NMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLY------NNIITAFCGMSNMD 536
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +++ M+ + + + F +I+G ++A +M A I MM ++G P+ TY L+
Sbjct: 537 RAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALI 596
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G ++ MA A IL M+ AG+
Sbjct: 597 LG-----------------------------------LVEKRKMAKAVAILDQMNVAGVG 621
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRR---LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P+ TYT LM GYA GD + + +L G + Y ++ + SG + V
Sbjct: 622 PNEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAV 681
Query: 319 SAIVCFVNICFH-----------------WLEGPMMSQ---AGLEPSAQTYTKLMCGYAK 358
+ + NI + W +M Q G+ P TYT + K
Sbjct: 682 TKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCK 741
Query: 359 HGDMDSIRRLLAQ 371
GDM ++ +
Sbjct: 742 AGDMQKATEIIQE 754
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 119/292 (40%), Gaps = 37/292 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y++L+ Y + K++ +GIE VTY S ++ + + G + A
Sbjct: 312 YSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTY------SIIVGGFAKMGKADAADH 365
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ ++K ++ + ++IY H Q +M AE ++ M G++ Y +M GY
Sbjct: 366 WFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYT 425
Query: 206 KHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
G+ + LK P + C L NL + ++ A I MM +G+
Sbjct: 426 MIGNEEKCLIVFDRLKECGFSPSVISYGC----LINLYTKIGK-VSKALQISKMMKMSGI 480
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
+ + +TY+ L+ G+ K D + + + D Y +II A +
Sbjct: 481 KHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCG------MSN 534
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ +C V M + P+ +T+ ++ G+A+ G+M RR L
Sbjct: 535 MDRAICMVK---------QMQKERYRPTTRTFLPIIHGFARAGEM---RRAL 574
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 32/242 (13%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++ Y + G++ A + E M+ + S V+++LI+ ++ DM A + M + G
Sbjct: 280 MVKYYARRGDMHHARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEG 339
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS-------IKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
+E + TY+ ++ G+AK G D+ K K+PSL + + ++ T
Sbjct: 340 IEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYGSIIYAHCQT------- 392
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDY 299
+M AE ++ M G++ Y +M GY G+ + V L + G S Y
Sbjct: 393 CNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISY 452
Query: 300 LDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
+I+ G ++S MM +G++ + +TY+ L+ G+ K
Sbjct: 453 GCLINLYTKIGKVSKALQISK---------------MMKMSGIKHNMKTYSMLINGFLKL 497
Query: 360 GD 361
D
Sbjct: 498 KD 499
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 125/294 (42%), Gaps = 26/294 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y L+R Y+ + + L +++ G+ N TY LI+ ++ + C+ ++
Sbjct: 470 NVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCE---VD 526
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
G K FM + P + +N++I G +A M SA + M + GL P+ TYT +
Sbjct: 527 GMLK--SFMSEGFIP-TMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFI 583
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQA 258
GY + G D + ++ + L N LI +M+ A +L ++ +
Sbjct: 584 DGYCRTGCSDMALKMLNDVRRRG---LQPDIVAYNALINGFCQEGNMSHALQLLVILLKD 640
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
GL P+ Y L+ GY M V + Y +I V+ Y +
Sbjct: 641 GLAPNTVVYNSLITGYKNLNMMKEVSKF------------YESMIKGGIVADTSTYTTLI 688
Query: 319 SAIVCFVNICFHW-LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
N+ F L MM++ G P A T+T L G + GD+D ++LL +
Sbjct: 689 DGFSKDGNVAFALELYSEMMAK-GYIPDAFTFTALTHGLCRSGDIDGAKKLLEE 741
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 144/369 (39%), Gaps = 35/369 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ + + +++ G++P+ TY L+ YC+ G ++
Sbjct: 400 DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMG------YCKKGCMD 453
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ M + F + + L+ G+ D +A +L M Q G+ + TY L+
Sbjct: 454 EAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLI 513
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAG 259
G + + + S SE F+ +++ + + M SA + M + G
Sbjct: 514 NGICMVDRVCEVDGMLKSF--MSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKG 571
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYID 316
L P+ TYT + GY + G D ++L + D Y +I+ G+ +
Sbjct: 572 LPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHAL 631
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNG 373
++ I+ + GL P+ Y L+ GY M + + + + G
Sbjct: 632 QLLVILL---------------KDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGG 676
Query: 374 SSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAA 430
Y +I + G+ + E+ S++ GY DA + L G ID A
Sbjct: 677 IVADTSTYTTLIDGFSKDGNVAFALELYSEMM-AKGYIPDAFTFTALTHGLCRSGDIDGA 735
Query: 431 YRIVNTLAR 439
+++ + R
Sbjct: 736 KKLLEEMRR 744
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 6/211 (2%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E +P +I Y + + Y + L + +G++P+ V Y LI+ +C
Sbjct: 569 EKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALING------FC 622
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
Q+GN+ A ++L + + V+N+LI G+ N M M + G+
Sbjct: 623 QEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTS 682
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
TYT L+ G++K G++ + + + F+F + S D+ A+ +L M
Sbjct: 683 TYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEM 742
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+ + P+ Y L+ GY + + RL
Sbjct: 743 RRLDVRPNVFIYNMLINGYLRDCKLQEAFRL 773
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 122/341 (35%), Gaps = 88/341 (25%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------- 127
+D+ L+R Y + + + + GI P +V Y LI
Sbjct: 295 MDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYEL 354
Query: 128 ----------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
S ++ D + A + E M D P +N LI+ H Q
Sbjct: 355 CRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLP-DVFTYNNLIHWHCQ 413
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
A+ + A + M +AG++PS TY L+ GY K G MD ++K SE
Sbjct: 414 AHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDE------AVKLYSE------ 461
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---A 288
M G +P+ TY LM GY D D+ LL
Sbjct: 462 -----------------------MPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMK 498
Query: 289 QSGSSLVNGDYLDIIHALAVSGHGEYIDE----------VSAIVCFVNICFHWLEGPMMS 338
Q+G S + Y +I+ + + +D + ++ + +I +++ MM
Sbjct: 499 QNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMG 558
Query: 339 QA----------GLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
A GL P+ TYT + GY + G D ++L
Sbjct: 559 SAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKML 599
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 6/120 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D S Y L+ + + + + +++ ++G P+ T+ + L C+ G+I+
Sbjct: 680 DTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTF------TALTHGLCRSGDID 733
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA K+LE MR + ++N LI G+ + + A + M G++P TY L+
Sbjct: 734 GAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 114/312 (36%), Gaps = 64/312 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN++L Y + L K+ S G+EPN VTY S L++ C++G
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY------SSLMNYLCKNGRST 323
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A KI + M + + L+ G++ + +L +M + G++P + L+
Sbjct: 324 EARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
C YAK +D + L FS M Q GL
Sbjct: 384 CAYAKQEKVD-------------QAMLVFS----------------------KMRQHGLN 408
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE- 317
P+ Y ++ K G +D Q + + Y +IH L + +E
Sbjct: 409 PNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEEL 468
Query: 318 ----VSAIVCFVNICF------HWLEG---------PMMSQAGLEPSAQTYTKLMCGYAK 358
+ +C I F H EG +M + G++P TY L+ G
Sbjct: 469 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 528
Query: 359 HGDMDSIRRLLA 370
G MD +LLA
Sbjct: 529 AGKMDEATKLLA 540
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 131/335 (39%), Gaps = 30/335 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFL---AKLESQGIEPNRVTYQQLISNSKLIS 132
EL D+ YN LL+ D + + L A G P+ V+Y +++
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNG----- 210
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ ++G+ + A M D+ ++++I +A M A +L M + G+ P
Sbjct: 211 -FFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKP-QSELFLCFSFQLTNLLILVSSDMASAEG- 250
TY ++ GY G K I +LK +S+ ++L+ + + S E
Sbjct: 270 DCMTYNSILHGYCSSG---QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326
Query: 251 -ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
I M++ GLEP TY L+ GYA G + + LL + + D+ +
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
E +D+ A++ F M Q GL P+ Y ++ K G +D
Sbjct: 387 AKQEKVDQ--AMLVFSK----------MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434
Query: 370 AQNGSSLVNGD---YLDIIHALAVSGHGEYIDEII 401
Q + + Y +IH L + +E+I
Sbjct: 435 EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI 469
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 116/312 (37%), Gaps = 60/312 (19%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+ +I +C++G + + K+ + M +N LI G A M A +L M
Sbjct: 485 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 544
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
G++P TY L+ GY + MD
Sbjct: 545 VGVKPDIVTYGTLINGYCRVSRMD-----------------------------------D 569
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIH 304
A + M +G+ P+ TY ++ G + + L + +SG+ L Y I+H
Sbjct: 570 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 629
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
L DE A+ F N+C L+ +T+ ++ K G MD
Sbjct: 630 GLC---KNNLTDE--ALRMFQNLCL----------TDLQLETRTFNIMIGALLKCGRMDE 674
Query: 365 IRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA---NHI 418
+ L A + ++ + D Y + L G E +D++ ++ G SAD+ + +
Sbjct: 675 AKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEEN-GCSADSRMLNSIV 733
Query: 419 YHLINKGQIDAA 430
L+ +G I A
Sbjct: 734 RKLLQRGDITRA 745
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 6/212 (2%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+ V DI YN L+ T LA + S G++P+ VTY LI+ YC
Sbjct: 509 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY------GTLINGYC 562
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ ++ A + + M + +N ++ G A+A+ + ++++G +
Sbjct: 563 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELS 622
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
TY ++ G K+ D +L +F + +L M A+ +
Sbjct: 623 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAH 682
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
S GL P +TY+ + + G ++ + L
Sbjct: 683 SANGLVPDVRTYSLMAENLIEQGSLEELDDLF 714
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + L ++ G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTF------TTLIDGHCKNGKVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M + F +N LIYG + D+ A ++ M GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMD-SIKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD++ + + + ++ L + ++ ++ L AE +L M G
Sbjct: 319 DGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGL--CREGRAGDAEKMLREMLTVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT +M + K GD+ + +LL +
Sbjct: 377 LKPDNGTYTMIMNEFCKTGDVKTASKLLRE 406
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 132/306 (43%), Gaps = 37/306 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + +M A+ + +++ L PS ++ LM GY + GD+D
Sbjct: 132 YPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A +L M GL P+ T+T L+
Sbjct: 192 RLKSAMHATGVQPDVY-TYSVLINGL--CKESKMDEANEMLNEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH-GEYIDEVSAIVCFVNI 327
G+ K+G +D + Q S D Y +I+ L G G+ D V ++
Sbjct: 249 DGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMI----- 303
Query: 328 CFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDI 384
GL+P TYT L+ G K GD++ +R+ + + L Y +
Sbjct: 304 -----------MKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTAL 352
Query: 385 IHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLI-----NKGQIDAAYRIVNTLAR 439
I L G ++++ ++ VG D N Y +I G + A +++ + R
Sbjct: 353 ISGLCREGRAGDAEKMLREMLT-VGLKPD--NGTYTMIMNEFCKTGDVKTASKLLREMQR 409
Query: 440 SANING 445
+ + G
Sbjct: 410 NGPVPG 415
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 18/251 (7%)
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
++S + L++ Y + G+++ ++ M ++ LI G + + M A +L
Sbjct: 171 VVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLN 230
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
M GL P+ T+T L+ G+ K+G +D + Q L ++ +
Sbjct: 231 EMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRG 290
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYL 300
D+ A ++ M GL+P TYT L+ G K GD++ +R+ + + L Y
Sbjct: 291 DLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYT 350
Query: 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+I L G +++ M GL+P TYT +M + K G
Sbjct: 351 ALISGLCREGRAGDAEKMLR---------------EMLTVGLKPDNGTYTMIMNEFCKTG 395
Query: 361 DMDSIRRLLAQ 371
D+ + +LL +
Sbjct: 396 DVKTASKLLRE 406
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 130/305 (42%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD++
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 198 RLKSAMLASGVQPDVY-TYSVLINGL--CKESKMDDANELFDEMLVKGLIPNGVTFTTLI 254
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I+ L G + IDE
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDE------- 307
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TY L+ G K GD+D+ R+ + Q L + Y
Sbjct: 308 ------------MSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 355
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG D + I KG + +++ +
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLS-VGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 439 RSANI 443
R ++
Sbjct: 415 RDGHV 419
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 211 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF------TTLIDGHCKNGRVD 264
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M + +N LIYG + D+ A ++ MS GL+P TY L+
Sbjct: 265 LAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLI 324
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE +L M GL+
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P +TYT ++ + K GD+ +LL +
Sbjct: 385 PDDRTYTMIINEFCKKGDVWKGSKLLKE 412
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ + + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +LL +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 132/307 (42%), Gaps = 47/307 (15%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ L PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSV----RRLLAQSGS-SLVNGDYLDIIHALAVSGH----GEYIDEVSAIV 322
G+ K+G +D + +L+QS S L+ Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKLMLSQSLSPDLIT--YNTLIYGLCKKGDLKQAQDLIDE----- 301
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNG 379
MS GL+P TYT L+ G K GD+++ R+ + + L +
Sbjct: 302 --------------MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDV 347
Query: 380 DYLDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIV 434
Y +I L G + + E++S ++P +G N KG + +++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLL 404
Query: 435 NTLARSA 441
+ R
Sbjct: 405 KEMQRDG 411
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 120/299 (40%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + + P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
Length = 888
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 116/284 (40%), Gaps = 59/284 (20%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMR-------DKTF-PISEG---- 160
G++P+R Y L+ +C+ GN++ A +I E M+ ++TF PI EG
Sbjct: 493 GLQPDRAIYNLLVE------AFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVA 546
Query: 161 -----------------------VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+NALI+G + + + A +L MS AG+ P+ TY
Sbjct: 547 GDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTY 606
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
T +M GYA GD+ +K + ++ S M SA + MS
Sbjct: 607 TIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSF 666
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY 314
+ + Y L+ G+A+ GD+ L+ Q + + + I+A +G +
Sbjct: 667 QKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQR 726
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+ V M+ GL+P+ +T+T L+ G+AK
Sbjct: 727 AENVIQ---------------EMADVGLKPNVKTFTTLIKGWAK 755
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 116/289 (40%), Gaps = 61/289 (21%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
+D P+D+ Y++++ Y + +L+ G P+ +IS LI+ Y +
Sbjct: 389 IDAPIDV--YHSMMHGYTVAQDEKKCLIVFERLKECGFRPS------IISYGCLINLYVK 440
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G + A + + M + ++ LI G +D A+A I M ++GL+P
Sbjct: 441 IGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAI 500
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y L+ + K G+MD A I M
Sbjct: 501 YNLLVEAFCKMGNMD-----------------------------------RAIRIFERMK 525
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
+ ++PS +T+ ++ G+A GDM L+ +SG + Y +IH L + H
Sbjct: 526 KERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGL-IRKH-- 582
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+V V ++ MS AG+ P+ TYT +M GYA GD+
Sbjct: 583 ---QVERAVSVLD---------KMSIAGIAPNEHTYTIIMRGYAASGDI 619
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 143/347 (41%), Gaps = 48/347 (13%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++ Y + G+ A E MR + + VF +L++ ++ A DM A + M G
Sbjct: 259 MVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEG 318
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV-------- 241
LE + TY+ L+ GY K D +S +LF +L NL ++
Sbjct: 319 LEMTVVTYSILIAGYGKTNDAES----------ADKLFKEAKTKLDNLNGIIYSNIIHAH 368
Query: 242 --SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSG--SSL 294
S +M AE ++ M + G++ Y +M GY D V L + G S+
Sbjct: 369 CQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSI 428
Query: 295 VNGDYL--------DIIHALAVS----GHG-EYIDEVSAIVCFVNICFHWLEGPM----- 336
++ L + ALAVS HG ++ ++ +++ I H
Sbjct: 429 ISYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFED 488
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV---NGDYLDIIHALAVSGH 393
M ++GL+P Y L+ + K G+MD R+ + + N + II AV+G
Sbjct: 489 MIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGD 548
Query: 394 -GEYIDEIISKIQPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLA 438
+D + + G + N + H LI K Q++ A +++ ++
Sbjct: 549 MKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMS 595
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 87/388 (22%), Positives = 148/388 (38%), Gaps = 101/388 (26%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
F ++ +++ D A M G+EP+A +T L+ YA
Sbjct: 256 FGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYA---------------- 299
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
V+ DM A + M GLE + TY+ L+ GY K D +
Sbjct: 300 -------------------VARDMRGALSCVEEMKSEGLEMTVVTYSILIAGYGKTNDAE 340
Query: 282 SVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV------SAIVCFVNICFHWL 332
S +L ++ + L N + Y +IIHA SG+ + +E+ I +++ +
Sbjct: 341 SADKLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMM 400
Query: 333 EGPMMSQ--------------AGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNG-- 373
G ++Q G PS +Y L+ Y K G + ++ + + +G
Sbjct: 401 HGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHGIK 460
Query: 374 ------SSLVNG--DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLI--- 422
S L+NG D +A ++ + D I S +QP D A IY+L+
Sbjct: 461 HNNKTYSMLINGFIHLHDFANAFSI-----FEDMIKSGLQP------DRA--IYNLLVEA 507
Query: 423 --NKGQIDAAYRIVNTLA--RSANINGEQLP-VGGFLVRHMVKT--------NQPGVGYS 469
G +D A RI + R N P + GF V +K + G +
Sbjct: 508 FCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPT 567
Query: 470 ADAANHIYH-LINKGQIDAAYRIVNTLA 496
N + H LI K Q++ A +++ ++
Sbjct: 568 VMTYNALIHGLIRKHQVERAVSVLDKMS 595
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P + YN L+ + + D + +++ GI PN T+ + I+ C+ G
Sbjct: 669 IPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTF------TSYINACCKAG 722
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+++ A +++ M D + F LI G ++ + A M AGL+P Y
Sbjct: 723 DMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAY 781
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ ++ +G+ PN VT+ LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDG------HCKNGKLD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M + F +N LIYG + D+ A+ + MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+++ + ++ S+ + AE +L M GL+
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLK 378
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT +M + K+GD+ +LL +
Sbjct: 379 PDTGTYTIVMHEFCKNGDVKMGSKLLKE 406
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 129/305 (42%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L+ + ++ A+ + +++ GL PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKSAMHASGVQPDVYT-YSVLINGL--CKESKMDEAHKLFDEMLDRGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I+ L G + DE
Sbjct: 249 DGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+++ R+ + + L + Y
Sbjct: 302 ------------MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSY 349
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG D + ++ G + +++ +
Sbjct: 350 TALISGLCKEGRSVDAEKMLREML-SVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQ 408
Query: 439 RSANI 443
R ++
Sbjct: 409 RDGHV 413
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 117/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + G+ P+ V++ L++ Y
Sbjct: 129 ECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + Q ++ + D+ A+ + M
Sbjct: 243 TFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT +M + K+GD+ +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKE 406
>gi|297733647|emb|CBI14894.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 119/296 (40%), Gaps = 35/296 (11%)
Query: 88 ALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL 147
AL++ + D +++E +GI N + Y + L+ Y + +E A +
Sbjct: 318 ALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVY------NTLMDAYSKSNRVEEAEGLF 371
Query: 148 EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 207
M+ K + +N L+ +S+ E +L M GLEP+ ++YT L+ Y +
Sbjct: 372 GEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQ 431
Query: 208 GDMDS------IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
M ++ K +KP S + + V A M + G++
Sbjct: 432 KKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYS-----VGGWHEKAYTAFENMKREGIK 486
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYIDEV 318
PS +TYT L+ + + GD ++ ++ S + G + ++ A GH Y++
Sbjct: 487 PSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGH--YMEAR 544
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGS 374
I F I G +P+ TY LM YA+ G + +LL + S
Sbjct: 545 DVIFEFGKI-------------GFQPTVMTYNMLMNAYARGGQHSRLPQLLKEMTS 587
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 18/191 (9%)
Query: 86 YNALLRVY-LDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
Y AL+ Y + H + T F ++ +GI+P+ TY + L+ + + G+ +
Sbjct: 457 YTALIHAYSVGGWHEKAYTAF-ENMKREGIKPSIETY------TALLDAFRRAGDTQTLM 509
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
KI + M + FN L+ G ++ A ++ + G +P+ TY LM Y
Sbjct: 510 KIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAY 569
Query: 205 AKHGDMDSIKTKIP-----SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
A+ G + + +LKP S + + + D A M ++G
Sbjct: 570 ARGGQHSRLPQLLKEMTSLNLKPDSITYSTMIYAYVRV-----RDFKRAFFYHKQMVKSG 624
Query: 260 LEPSAQTYTKL 270
P Q+Y KL
Sbjct: 625 QVPDPQSYQKL 635
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 109/279 (39%), Gaps = 18/279 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN LLR L+ +++++ S+G EPN VTY S LIS C+DG IE
Sbjct: 184 DVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTY------SILISSLCRDGKIE 237
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ +++ M++K ++ LI + + A L M G P Y +M
Sbjct: 238 ESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIM 297
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
K+G+ D L S+ + S D A G+++ M G++
Sbjct: 298 AALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGID 357
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P TY L+ + G +D LLA S + + L ID+ +
Sbjct: 358 PDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEV 417
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+ M + G +P+ TYT L+ G G
Sbjct: 418 L------------AAMIENGCQPNETTYTLLIEGIGFSG 444
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 132/316 (41%), Gaps = 35/316 (11%)
Query: 121 YQ-QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAE 179
YQ +I +KLI + NI+ AT+++ + P +NA+I G +AN + SA+
Sbjct: 6 YQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKP-DVFAYNAVISGFCKANRIESAK 64
Query: 180 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD-SIKTKIPSLKPQSELFLCFSFQLTNLL 238
+L M + G P T+ ++ + G +D ++K LK + ++ +
Sbjct: 65 TVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEA 124
Query: 239 ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD 298
++ + A +L M GLEP TY + G K G +D + S D
Sbjct: 125 YILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPD 184
Query: 299 ---YLDIIHALAVSG---HGE-YIDEVSAIVCFVNICFHWL-------EGPM-------- 336
Y ++ AL G GE ++ E+ + C N+ + + +G +
Sbjct: 185 VITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVK 244
Query: 337 -MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG------DYLDIIHALA 389
M + GL P A Y L+ + + G +D L + +G +Y I+ AL
Sbjct: 245 VMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFL---DCMICDGFLPDIVNYNTIMAALC 301
Query: 390 VSGHGEYIDEIISKIQ 405
+G+G++ EI K+
Sbjct: 302 KNGNGDHAVEIFGKLD 317
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 135/355 (38%), Gaps = 77/355 (21%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YNA++ + S L +++ +G P+ VT+ +I +C G I+
Sbjct: 43 DVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGT------FCGKGKID 96
Query: 142 GATKILE-FMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A K+ E ++D + + LI + + A +L M GLEP TY +
Sbjct: 97 LALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVI 156
Query: 201 MCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLL----------------- 238
G K G +D + +L KP + ++ L LL
Sbjct: 157 TRGLCKEGKVDRAFEFVRTLNSRGCKPD---VITYNILLRALLNQGKWDEGEKWMSEIFS 213
Query: 239 -----------ILVSS-----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
IL+SS + + ++ +M + GL P A Y L+ + + G +D
Sbjct: 214 RGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDM 273
Query: 283 VRRLLAQSGSSLVNG------DYLDIIHALAVSGHGEYIDEV----SAIVCFVNICFH-- 330
L + +G +Y I+ AL +G+G++ E+ + C N+ +
Sbjct: 274 AIEFL---DCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNT 330
Query: 331 -----WLEGP------MMSQ---AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
W G M+SQ G++P TY L+ + G +D LLA
Sbjct: 331 MLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLAD 385
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E+ P ++S YN +L + + ++++ S+GI+P+ +TY LIS C
Sbjct: 318 EVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISC------LC 371
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+DG ++ A +L M F + + ++ G +A+ + A +L M + G +P+
Sbjct: 372 RDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNET 431
Query: 196 TYTKLMCGYAKHG 208
TYT L+ G G
Sbjct: 432 TYTLLIEGIGFSG 444
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 117/303 (38%), Gaps = 61/303 (20%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ LD Y AL+R L + + S G P+ VT S +I + G
Sbjct: 87 LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTL------STMIDGLSKAG 140
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
I A +I + M + +E V++ALI+G +A M A +L M +A P TY
Sbjct: 141 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 200
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G K GD++ +A M +A
Sbjct: 201 VLIDGLCKSGDVE-----------------------------------AARAFFDEMLEA 225
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS---GHGEYI 315
G +P TY L+ G+ K G+ D+ LAQ + +NG +DI A+ + I
Sbjct: 226 GCKPDVYTYNILISGFCKAGNTDAASHSLAQ--ETTINGCTIDIHTYTAIVDWLAKNKKI 283
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQN 372
+E A++ ++ G P+ TY L+ G K G ++ + R + N
Sbjct: 284 EEAVALM------------EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 331
Query: 373 GSS 375
G +
Sbjct: 332 GCT 334
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 78/204 (38%), Gaps = 41/204 (20%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ LD Y AL+R L + + S G P+ VT S +I + G
Sbjct: 368 LALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTL------STMIDGLSKAG 421
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
I A +I + M + +E V++ALI+G +A M A +L M +A P TY
Sbjct: 422 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 481
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G K GD+++ A M +A
Sbjct: 482 ILIDGLCKSGDVEA-----------------------------------ARAFFDEMLEA 506
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDS 282
G +P TY L+ G+ K G+ D+
Sbjct: 507 GCKPDVYTYNILISGFCKAGNTDA 530
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 101/289 (34%), Gaps = 67/289 (23%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I+ YNALL D L K+ G P+ VTY LI + K + + E
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG---LGK--EKRSFE- 355
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A K+ + M + + + ALI Q + A + M+ G P T + ++
Sbjct: 356 AYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMID 415
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
G +K G + +A I M GL P
Sbjct: 416 GLSKAGRI-----------------------------------GAAVRIFKSMEARGLAP 440
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE----YI 315
+ Y+ L+ G K MD +LAQ + D Y +I L SG E +
Sbjct: 441 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 500
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
DE M +AG +P TY L+ G+ K G+ D+
Sbjct: 501 DE-------------------MLEAGCKPDVYTYNILISGFCKAGNTDA 530
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 104/294 (35%), Gaps = 75/294 (25%)
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
IE A ++E + + +NAL+ G + + A +L + G P TYT
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFL--------CFSFQLTNLL------------ 238
L+ G K K + K E+ L C++ + LL
Sbjct: 61 SLIDGLGKE------KRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVY 114
Query: 239 -----------ILVSSDM----------ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
++ S M +A I M GL P+ Y+ L+ G K
Sbjct: 115 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 174
Query: 278 GDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE----YIDEVSAIVCFVNICFH 330
MD +LAQ + D Y +I L SG E + DE
Sbjct: 175 RKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDE------------- 221
Query: 331 WLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDI 384
M +AG +P TY L+ G+ K G+ D+ LAQ + +NG +DI
Sbjct: 222 ------MLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQE--TTINGCTIDI 267
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 118/333 (35%), Gaps = 78/333 (23%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L+ + + F ++ G +P+ TY LIS +C+ GN +
Sbjct: 195 DTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG------FCKAGNTD 248
Query: 142 GA--------------------TKILEFMRDKTFPISEGV-----------------FNA 164
A T I++++ K I E V +NA
Sbjct: 249 AASHSLAQETTINGCTIDIHTYTAIVDWLA-KNKKIEEAVALMEKITANGCTPTIATYNA 307
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
L+ G + + A +L + G P TYT L+ G K K + K
Sbjct: 308 LLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE------KRSFEAYKLFK 361
Query: 225 ELFL--------CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
E+ L C++ + LL + + A + M+ G P T + ++ G +K
Sbjct: 362 EMALRGLALDTVCYTALIRELL--QTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 419
Query: 277 HGDMDSVRRLL-AQSGSSLVNGD--YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
G + + R+ + L + Y +IH L + + E+ A
Sbjct: 420 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA------------- 466
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
M +A P TY L+ G K GD+++ R
Sbjct: 467 --QMKKAFCTPDTITYNILIDGLCKSGDVEAAR 497
>gi|255660878|gb|ACU25608.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 484
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDXLRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ + K G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVL 314
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 82/435 (18%), Positives = 168/435 (38%), Gaps = 56/435 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDXLRLVEEMKGFGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G++D+
Sbjct: 264 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAAD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I +G + +D++I K ++P + + +
Sbjct: 313 VLKAMIRLSVPTEAGHYGXLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A TL R G Q P L+R G+S +
Sbjct: 373 NPMIEYLCNNGQAXKA----ETLVRQLXKLGVQDPTALNTLIR----------GHSQE-- 416
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRL 533
G D+A+ ++ + R +B E+ LV+ +K N+P D A+ +
Sbjct: 417 ---------GSPDSAFELLKIMLRR-KVBSEKSAYIS-LVQSXLKKNEPXDAKAALDSMI 465
Query: 534 TDENLHPRAFNLAVL 548
+++L A +V+
Sbjct: 466 ENDHLPDSALFRSVM 480
Score = 46.6 bits (109), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDXLRLVEE 245
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 128/299 (42%), Gaps = 39/299 (13%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 134 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 193
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 194 RLKSAMLASGXXPDVYT-YSVLINGL--CKESKMDGANELFDEMLVKGLVPNXVTFTTLI 250
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I+ L G + IDE
Sbjct: 251 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE------- 303
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+D+ R+ + Q L + Y
Sbjct: 304 ------------MSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAY 351
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
+I L G ++++ ++ VG DA + I KG + +++ +
Sbjct: 352 TALISGLCQEGRSVDAEKMLREMLS-VGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ LI +C++G ++
Sbjct: 207 DVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDG------HCKNGRVD 260
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 261 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLI 320
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE +L M GL
Sbjct: 321 DGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLX 380
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P A TYT ++ + K GD+ +LL +
Sbjct: 381 PDAGTYTMIINEFCKKGDVWKGSKLLKE 408
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 119/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + + G+ P+ V+Y L++ Y
Sbjct: 131 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNG------YI 184
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M ++ LI G + + M A + M GL P+
Sbjct: 185 RLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXV 244
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS L ++ + D+ A ++ M
Sbjct: 245 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 304
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+D+ R+ + Q L + Y +I L G
Sbjct: 305 SXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRS 364
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL P A TYT ++ + K GD+ +LL +
Sbjct: 365 --VDAEKML-------------REMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKE 408
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I Y+AL +V L + K+ S+GIEP R T+ ++ +
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N ++ G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDRVDDALRLVEEMKGFGMKPNAITYSTLLPGLCN-----AEKMSEARS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M + + P+ + + +L+ G K GD+D+ +L
Sbjct: 277 ILKEMVEKYIAPTDNSIFMRLISGQCKAGDLDAAANVL 314
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 162/411 (39%), Gaps = 56/411 (13%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G ++ + K+ + M + + ++AL + A+ M G
Sbjct: 86 MIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMASA 248
+EP+ T+ +M G+ G +++ +K + + ++ + N V M A
Sbjct: 146 IEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKK-MEEA 204
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
E M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGFGMKPNAITYSTLLPG 264
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT-YTKLMCGYAKHGDMDS--- 364
+ E + E +I+ M + + P+ + + +L+ G K GD+D+
Sbjct: 265 LCNAEKMSEARSIL------------KEMVEKYIAPTDNSIFMRLISGQCKAGDLDAAAN 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I +G + +D++I K ++P +++ +
Sbjct: 313 VLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHMESSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A +V L + G Q P L+R G+S +
Sbjct: 373 NPLIEYLCNNGQTAKAEALVRQLMKL----GVQDPTALNTLIR----------GHSQE-- 416
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPID 524
G D+A+ ++ + R ++ EQ LV+ +K N+P D
Sbjct: 417 ---------GSPDSAFELLKIMLRR-KVDSEQSSYDS-LVQSYLKKNEPAD 456
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 115/273 (42%), Gaps = 30/273 (10%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
K+ G P VTY LI+ Y GN+ A ++L+ M++ E +N
Sbjct: 472 LFEKMLKMGPLPTVVTYNTLING------YLTKGNVNNAARLLDLMKENGCEPDEWTYNE 525
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
L+ G S+ + SA M + GL P+ +YT L+ G++K G +D + L+
Sbjct: 526 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVD---IALSLLERME 582
Query: 225 ELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
E+ + + N +I + + AE I M++ GL P+ TYT L+ G ++G
Sbjct: 583 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQ 642
Query: 282 SVRRLL--AQSGSSLVN-GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
++ + L N Y +I+ L G DE ++ M
Sbjct: 643 FAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKA---DEAEILL------------KEME 687
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ GL P T+T L+ G+ G +D LL +
Sbjct: 688 RKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRR 720
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 133/330 (40%), Gaps = 69/330 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------ 127
YN L+ YL + + L ++ G EP+ TY +L+S
Sbjct: 488 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 547
Query: 128 -----------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
+ LI + +DG ++ A +LE M + + +NA+I G S+ N +
Sbjct: 548 ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFS 607
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG----------DMDSIKTKIPSLKPQSEL 226
AE I M++ GL P+ TYT L+ G ++G DM+ K +P+L S L
Sbjct: 608 EAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC-LPNLYTYSSL 666
Query: 227 F--LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 282
LC AE +L M + GL P T+T L+ G+ G +D
Sbjct: 667 IYGLC-----------QEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAF 715
Query: 283 --VRRLL-------AQSGSSLVNG---DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFH 330
+RR++ ++ S L+ G + L + +AV Y I +
Sbjct: 716 LLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSN 775
Query: 331 WLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
L MS+ G EP+ TY+ L+ G + G
Sbjct: 776 LL--ARMSEIGCEPTLDTYSTLVSGLCRKG 803
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 132/334 (39%), Gaps = 59/334 (17%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+ D+ D+ Y +L+ + N + ++ +G +PN VTY S LI+ C
Sbjct: 268 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTY------STLINGLC 321
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+G ++ A +LE M +K + + I A ++ M + G P+ Q
Sbjct: 322 NEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQ 381
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELF------LCFSFQLTNLL------ 238
TYT L+ G ++ G ++ K L P + + LC + + L
Sbjct: 382 TYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 441
Query: 239 ------------------ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
+ + D+ A + M + G P+ TY L+ GY G++
Sbjct: 442 EGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNV 501
Query: 281 DSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
++ RLL ++G Y +++ + G E + F++ E M
Sbjct: 502 NNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE------------SASFYFQE---M 546
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ GL P+ +YT L+ G++K G +D LL +
Sbjct: 547 VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLER 580
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 132/342 (38%), Gaps = 64/342 (18%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K+ +G+ PN VTY + LI++ C G A KI +M + +N +I
Sbjct: 405 KMLKEGLVPNTVTY------NALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIK 458
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G D+ A + M + G P+ TY L+ GY G+++
Sbjct: 459 GLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN---------------- 502
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+A +L +M + G EP TY +L+ G++K G ++S
Sbjct: 503 -------------------NAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYF 543
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
+ +N + + + + GH + V+I LE M + G P+ +
Sbjct: 544 QEMVECGLNPN--PVSYTTLIDGHSKDGK--------VDIALSLLE--RMEEMGCNPNVE 591
Query: 348 TYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEII--- 401
+Y ++ G +K ++ +A+ G Y +I L +G ++ +I
Sbjct: 592 SYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 651
Query: 402 --SKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSA 441
K P + Y+ + IY L +G+ D A ++ + R
Sbjct: 652 EKRKCLPNL-YTYSSL--IYGLCQEGKADEAEILLKEMERKG 690
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 129/343 (37%), Gaps = 65/343 (18%)
Query: 89 LLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILE 148
+++ + E DFL ++ G + L S + L+ + + +EGA + +
Sbjct: 176 MIKACRNEEEIRRVADFLNEISGMGFGFS------LYSCNTLLIQLAKFEMVEGARNLYK 229
Query: 149 FMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 208
M + S FN LI S+ + AE IL+ + Q L P TYT L+ G+ ++
Sbjct: 230 QMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNR 289
Query: 209 DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYT 268
++D A G+ M + G +P++ TY+
Sbjct: 290 NLD-----------------------------------LAFGVFDRMVKEGCDPNSVTYS 314
Query: 269 KLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
L+ G G +D +L + G Y I AL H E E+ A
Sbjct: 315 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVA----- 369
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYL 382
M + G P+ QTYT L+ G ++ G ++ + + + G Y
Sbjct: 370 ----------RMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYN 419
Query: 383 DIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
+I+ L V G +I ++ G+ + A Y+ I KG
Sbjct: 420 ALINELCVGGRFSTALKIFHWME---GHGSLANTQTYNEIIKG 459
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 78/185 (42%), Gaps = 20/185 (10%)
Query: 98 HTFSP----------TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL 147
++FSP ++ LA++ G EP TY S L+S C+ G A +++
Sbjct: 759 YSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTY------STLVSGLCRKGRFYEAEQLV 812
Query: 148 EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 207
+ M+++ F ++ +L+ H + ++ A I + G + Y L+C K
Sbjct: 813 KDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKA 872
Query: 208 GDMDSIKTKIPSL--KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
G ++ + ++ K + + ++ + LL D+ +L +M P+ Q
Sbjct: 873 GQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMK--LLHIMESKNFTPNIQ 930
Query: 266 TYTKL 270
TY L
Sbjct: 931 TYVIL 935
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 102/282 (36%), Gaps = 62/282 (21%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++E +G+ P+ VT+ LI ++ G I+ A +L M D + ++
Sbjct: 682 LLKEMERKGLAPDEVTFTSLIDGFVVL------GRIDHAFLLLRRMVDVGCKPNYRTYSV 735
Query: 165 LIYG------------------------HSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
L+ G H + + +L MS+ G EP+ TY+ L
Sbjct: 736 LLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTL 795
Query: 201 MCGYAKHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLLILVSSDMA--SAEGILT 253
+ G + G + + +K P E++ +LLI ++ A I
Sbjct: 796 VSGLCRKGRFYEAEQLVKDMKERGFCPDREIYY-------SLLIAHCKNLEVDHALKIFH 848
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG--- 310
+ G + Y L+C K G ++ + L N D +I+ + V G
Sbjct: 849 SIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNAD--EIVWTVLVDGLLK 906
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
GE +++C L +M P+ QTY L
Sbjct: 907 EGE-----------LDLCMKLLH--IMESKNFTPNIQTYVIL 935
>gi|225456802|ref|XP_002275673.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic [Vitis vinifera]
gi|147821419|emb|CAN76897.1| hypothetical protein VITISV_010606 [Vitis vinifera]
Length = 692
Score = 73.2 bits (178), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 118/293 (40%), Gaps = 35/293 (11%)
Query: 88 ALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL 147
AL++ + D +++E +GI N + Y + L+ Y + +E A +
Sbjct: 318 ALIKSFCDEGLKNEALIIQSEMEKKGISSNAIVY------NTLMDAYSKSNRVEEAEGLF 371
Query: 148 EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 207
M+ K + +N L+ +S+ E +L M GLEP+ ++YT L+ Y +
Sbjct: 372 GEMKAKGVMPTSATYNILMDAYSRRMQPEIIENLLLEMQDMGLEPNVKSYTCLISAYGRQ 431
Query: 208 GDMDS------IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
M ++ K +KP S + + V A M + G++
Sbjct: 432 KKMSDMAADAFLRMKKVGIKPTSHSYTALIHAYS-----VGGWHEKAYTAFENMKREGIK 486
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYIDEV 318
PS +TYT L+ + + GD ++ ++ S + G + ++ A GH Y++
Sbjct: 487 PSIETYTALLDAFRRAGDTQTLMKIWKLMLSDKIEGTRVTFNILLDGFAKQGH--YMEAR 544
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
I F I G +P+ TY LM YA+ G + +LL +
Sbjct: 545 DVIFEFGKI-------------GFQPTVMTYNMLMNAYARGGQHSRLPQLLKE 584
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 18/191 (9%)
Query: 86 YNALLRVY-LDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
Y AL+ Y + H + T F ++ +GI+P+ TY + L+ + + G+ +
Sbjct: 457 YTALIHAYSVGGWHEKAYTAF-ENMKREGIKPSIETY------TALLDAFRRAGDTQTLM 509
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
KI + M + FN L+ G ++ A ++ + G +P+ TY LM Y
Sbjct: 510 KIWKLMLSDKIEGTRVTFNILLDGFAKQGHYMEARDVIFEFGKIGFQPTVMTYNMLMNAY 569
Query: 205 AKHGDMDSIKTKIP-----SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
A+ G + + +LKP S + + + D A M ++G
Sbjct: 570 ARGGQHSRLPQLLKEMTSLNLKPDSITYSTMIYAYVRV-----RDFKRAFFYHKQMVKSG 624
Query: 260 LEPSAQTYTKL 270
P Q+Y KL
Sbjct: 625 QVPDPQSYQKL 635
>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
Length = 792
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 145/374 (38%), Gaps = 45/374 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y L+ ++ + K++ G++P+ VTY L+ YC+ G ++
Sbjct: 394 DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLG------YCEKGRMD 447
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ M DK FP +E + L+ G+ + +A +L M Q G+ TY L+
Sbjct: 448 EALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILI 507
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAG 259
G + + + SE F+ + +++ + + M SA G+ M + G
Sbjct: 508 NGLYMVNRVCEVDEMLKRF--LSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKG 565
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
+ P+ TYT + GY + D +LL + D ++ + +ID
Sbjct: 566 ITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPD---------IAAYNAFIDTFC 616
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG 379
++ H+L ++ + GL P Y + GY M + V
Sbjct: 617 K-QGNMSRALHFLV--LLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVA 673
Query: 380 D---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHI-----------YHLINKG 425
D Y +I + G+ + E+ YS ANH+ + L G
Sbjct: 674 DTEIYTTLIDGFSKVGNVAFALEL---------YSEMMANHVIPDDKTFTALTHGLCRSG 724
Query: 426 QIDAAYRIVNTLAR 439
ID A R+++ + R
Sbjct: 725 DIDGAKRLLDDMRR 738
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 120/330 (36%), Gaps = 55/330 (16%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E V I Y++LL Y + +++ +G PN VTY + L+ Y
Sbjct: 423 EAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTY------TTLMKGYI 476
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ + A +L MR + +N LI G N + + +L G P+
Sbjct: 477 KKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTM 536
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCF--SFQLTN-------LLILV 241
TY ++ G+ K G M S + + + P + F + TN LLI V
Sbjct: 537 TYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYV 596
Query: 242 SSD---------------------MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
D M+ A L ++ + GL P Y + GY
Sbjct: 597 RRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKN---- 652
Query: 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW-LEGPMMSQ 339
+++A++ Y +I V+ Y + N+ F L MM+
Sbjct: 653 ---LKMMAEASKF-----YYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMAN 704
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ P +T+T L G + GD+D +RLL
Sbjct: 705 HVI-PDDKTFTALTHGLCRSGDIDGAKRLL 733
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 128/357 (35%), Gaps = 89/357 (24%)
Query: 64 LPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQ 123
L +D + TG+ +D+ L+ Y N D ++ S G+ P VTY
Sbjct: 275 LRLKDQMLLATGK---KMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGV 331
Query: 124 LISNS----------KLISKYCQDG----NIEGATKILEFMRDKTFPISEGV-------- 161
LI KL + + G E I +RDK + + G+
Sbjct: 332 LIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTG 391
Query: 162 ------FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT 215
+ LI+ + + A + M +AG++PS TY L+ GY + G MD
Sbjct: 392 VPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDE--- 448
Query: 216 KIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
+LK SE M G P+ TYT LM GY
Sbjct: 449 ---ALKLYSE-----------------------------MPDKGFPPNEVTYTTLMKGYI 476
Query: 276 KHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDE----------VSAIV 322
K D+ LL Q+G S + Y +I+ L + +DE V +
Sbjct: 477 KKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTM 536
Query: 323 CFVNICFHWLEGPMMSQA----------GLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ +I +++ MM A G+ P+ TYT + GY + D +LL
Sbjct: 537 TYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLL 593
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 124/320 (38%), Gaps = 75/320 (23%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y ALL YL ++ D ++ PN VTY S LI C+ G I+
Sbjct: 521 NVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTY------SALIDGLCKAGEIQ 574
Query: 142 GATKILE--------------FMRDKTFPISEGV--FNALIYGHSQANDMASAEGILTMM 185
A ++ E F + T I+ V + ALI G +A ++ A +L M
Sbjct: 575 KACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAM 634
Query: 186 SQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM 245
AG EP+ Y L+ G+ K G +D
Sbjct: 635 LAAGCEPNQIVYDALIDGFCKIGKID---------------------------------- 660
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDI 302
+A+ + M++ G PS TYT L+ K G +D ++L++ + N + Y +
Sbjct: 661 -NAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAM 719
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
I L+ G I++ ++ +M + G P+ TYT L+ G K G
Sbjct: 720 IDGLSKVGE---IEKALNLL------------SLMEEKGCSPNVVTYTALIDGLGKTGKA 764
Query: 363 DSIRRLLAQNGSSLVNGDYL 382
D+ +L Q S +Y+
Sbjct: 765 DASLKLFKQMNSKGCAPNYV 784
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 117/284 (41%), Gaps = 27/284 (9%)
Query: 121 YQQLISNSKLISK---------YCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
Y+++++ S +++K C G E A +IL+ M K F + +I Q
Sbjct: 405 YEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQ 464
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
A + + + M +AG+ P TYT L+ + K G ++ ++ ++ +
Sbjct: 465 AKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVT 524
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV----RRLL 287
+ L S + A I M A P+A TY+ L+ G K G++ +L+
Sbjct: 525 YTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLI 584
Query: 288 AQSGSSLVNGDYL-----DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
SG+ V D+ A V +G ID + + H L M++ AG
Sbjct: 585 GTSGN--VESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDA--HELLDAMLA-AGC 639
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIH 386
EP+ Y L+ G+ K G +D+ + + + + YL +H
Sbjct: 640 EPNQIVYDALIDGFCKIGKIDNAQEVFLR----MTKCGYLPSVH 679
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 123/316 (38%), Gaps = 41/316 (12%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
LD L + L+ L NE FL ++ PN VTY+ L+S + +
Sbjct: 269 LDTVLCTQMISGLMEASLFNE----AMSFLHRMRCNSCIPNVVTYRTLLSG------FLK 318
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+I+ M + + +FN+L++G+ A D A A + M+ G P
Sbjct: 319 KKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVA 378
Query: 197 YTKL---MCGYAK--HGDMDSIKTKI--PSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
Y +CG + + ++ + K+ L L + + L V A
Sbjct: 379 YNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGK-FEKAF 437
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
IL M + G P TYTK++ + ++ L + + VN D Y +I +
Sbjct: 438 QILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSF 497
Query: 307 AVSGHGE----YIDEVSAIVCFVNICFH------WLEGPMMSQ----------AGLEPSA 346
+G E + DE+ ++ C N+ + +L+ + Q A P+A
Sbjct: 498 CKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNA 557
Query: 347 QTYTKLMCGYAKHGDM 362
TY+ L+ G K G++
Sbjct: 558 VTYSALIDGLCKAGEI 573
>gi|255660882|gb|ACU25610.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 484
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ + K G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVL 314
Score = 46.6 bits (109), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 82/435 (18%), Positives = 167/435 (38%), Gaps = 56/435 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G++D+
Sbjct: 264 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAAD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I G + +D++I K ++P + + +
Sbjct: 313 VLKAMIRLSVPTEAGHYGXLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A TL R G Q P L+R G+S +
Sbjct: 373 NPMIEYLCNNGQAXKA----ETLVRQLXKLGVQDPTALNTLIR----------GHSQE-- 416
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRL 533
G D+A+ ++ + R ++ E+ LV+ +K N+P D A+ +
Sbjct: 417 ---------GSPDSAFELLKIMLRR-KVDSEKSAYNS-LVQSYLKKNEPXDAKAALDSMI 465
Query: 534 TDENLHPRAFNLAVL 548
+++L A +V+
Sbjct: 466 ENDHLPDSALFRSVM 480
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 126/300 (42%), Gaps = 41/300 (13%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS ++ LM GY + GDMD
Sbjct: 121 YPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGF 180
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 181 RLKNAMHASGVQPDVYT-YSVLINGL--CKESKMDDANEMFDEMLDKGLVPNGVTFTTLI 237
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I+ L G + IDE
Sbjct: 238 DGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDE------- 290
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+++ R+ + Q L + Y
Sbjct: 291 ------------MSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAY 338
Query: 382 LDIIHALAVSGHGEYID-EIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
+I L Y+D E + + VG D + I KG + +++ +
Sbjct: 339 TALISGLC--QEERYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 396
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 194 DVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTF------TTLIDGHCKNGRVD 247
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 248 LAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 307
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+++ + + ++ + AE +L M GL+
Sbjct: 308 DGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLK 367
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ + K GD+ + +LL +
Sbjct: 368 PDTGTYTMIINEFCKKGDVWTGSKLLKE 395
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 118/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + G+ P+ V++ L++ Y
Sbjct: 118 ECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNG------YI 171
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M ++ LI G + + M A + M GL P+
Sbjct: 172 RLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGV 231
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A ++ M
Sbjct: 232 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEM 291
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+++ R+ + Q L + Y +I L
Sbjct: 292 SMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLC--QEE 349
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
Y+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 350 RYLDAEKVL-------------REMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKE 395
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 117/290 (40%), Gaps = 26/290 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +++ ++ D LE + + PN V Y + LI YC+ G + A
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMY------TALIDGYCKAGKVNEAHL 553
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+LE M K + FNALI+G + A + M + L+P+ T T L+
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLL 613
Query: 206 KHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
K GD D + + KP + + F + AE ++ M + G+
Sbjct: 614 KDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCR-----EGRLQDAEDMVAKMKENGV 668
Query: 261 EPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
P TY+ L+ GY G +S V + + +G +L +I L +G+
Sbjct: 669 SPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGG 728
Query: 318 VSAIVCFVN-----ICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ N I LE M + G+ P+A++Y KLM G + G++
Sbjct: 729 EPGVCVMSNMMEFDIVVELLEK--MVEHGVTPNAKSYEKLMLGICEIGNL 776
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 186/464 (40%), Gaps = 65/464 (14%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIE----PNRVTYQQLISNSKLI 131
EL L I YN LL ++ F D + ++ + +E PN TY +K++
Sbjct: 176 ELKYKLIIGCYNTLL----NSLARFGLVDEMKQVYMEMLEDKVCPNIYTY------NKMV 225
Query: 132 SKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
+ YC+ GN+E A + + + + + +LI G+ Q D+ SA + M G
Sbjct: 226 NGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCR 285
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
+ YT L+ G +D +K ++ + + S + A +
Sbjct: 286 RNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNL 345
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSSLVNG--- 297
+ M + G++P+ TYT L+ ++ R LL Q + ++L+NG
Sbjct: 346 VKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCK 405
Query: 298 -----DYLDIIHALA---VSGHGEYIDEVSAIVCFVNICFHWLEGPM--MSQAGLEPSAQ 347
D LD++ + + + +E+ C N+ H G + M + + P
Sbjct: 406 RGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNV--HKAMGVLNKMLERKVLPDVV 463
Query: 348 TYTKLMCGYAKHGDMDSIRRLLA-QNGSSLVNG--DYLDIIHALAVSGHGEYIDEIISKI 404
TY L+ G + G+ DS RLL+ N LV Y +I +L S E ++ +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 405 Q-----PGV--------GYSADAANHIYHLINKGQIDAAYRIVNTLARSANING----EQ 447
+ P V GY + HL+ + + + N+L +A I+G +
Sbjct: 524 EQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNC-LPNSLTFNALIHGLCTDGK 582
Query: 448 LPVGGFLVRHMVKTN-QPGVGYSADAANHIYHLINKGQIDAAYR 490
L L MVK + QP V S D I+ L+ G D AYR
Sbjct: 583 LKEATLLEEKMVKIDLQPTV--STDTI-LIHRLLKDGDFDHAYR 623
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 129/357 (36%), Gaps = 54/357 (15%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------ 127
YNAL+ Y D + +ES+ + PN TY +LI
Sbjct: 396 YNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLE 455
Query: 128 ----------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS 177
+ LI C+ GN + A ++L M D+ + ++I ++ +
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEE 515
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
A + + Q + P+ YT L+ GY K G ++ + + ++ L +F
Sbjct: 516 ACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIH 575
Query: 238 LILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG 297
+ + A + M + L+P+ T T L+ K GD D R Q SS
Sbjct: 576 GLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKP 635
Query: 298 D---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMC 354
D Y I G + +++ A M + G+ P TY+ L+
Sbjct: 636 DAHTYTTFIQTYCREGRLQDAEDMVA---------------KMKENGVSPDLFTYSSLIK 680
Query: 355 GYAKHGDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGV 408
GY G +S + + + G +L +I L +G+ + +PGV
Sbjct: 681 GYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGK-----VKGGEPGV 732
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT-FPISEGVF 162
+ L K+ G+ PN +Y+ KL+ C+ GN+ A K+ + M+ K SE VF
Sbjct: 746 ELLEKMVEHGVTPNAKSYE------KLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVF 799
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 209
NAL+ + A ++ M G P ++ L+C K G+
Sbjct: 800 NALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGE 846
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 24/147 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y ++ Y D +AK++ G+ P+ TY S LI Y G
Sbjct: 636 DAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTY------SSLIKGYGDLGRTN 689
Query: 142 GATKILEFMRDKTFPISEGVFNALI-------YGH-----------SQANDMASAEGILT 183
A +L+ M D S+ F +LI YG S + +L
Sbjct: 690 SAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLE 749
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDM 210
M + G+ P+A++Y KLM G + G++
Sbjct: 750 KMVEHGVTPNAKSYEKLMLGICEIGNL 776
>gi|255660898|gb|ACU25618.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 484
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ + K G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVL 314
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKZG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 71/385 (18%), Positives = 149/385 (38%), Gaps = 39/385 (10%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G++D+
Sbjct: 264 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAAD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I G + +D++I K ++P + + +
Sbjct: 313 VLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A +V L + G Q P L+R + P D+A
Sbjct: 373 NPMIEYLCNNGQAAKAETLVRQLLKL----GVQDPTALNTLIRGHSQEGSP------DSA 422
Query: 474 NHIYHLINKGQIDAAYRIVNTLARS 498
+ ++ + ++D+ N+L +S
Sbjct: 423 FELLKIMLRRKVDSEKSAYNSLVQS 447
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 130/305 (42%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A + +++ GL PS ++ LM GY + GD+D
Sbjct: 136 YPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 195
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 196 RLKSAMHASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLDKGLVPNGVTFTTLI 252
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 253 DGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE------- 305
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
M GL+P +YT L+ G K GD+++ R+ + Q L + Y
Sbjct: 306 ------------MRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAY 353
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG D + I KG + +++ +
Sbjct: 354 TALISGLCQEGRSIDAEKMLREML-SVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 412
Query: 439 RSANI 443
R ++
Sbjct: 413 RDGHV 417
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 209 DVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF------TTLIDGHCKNGRVD 262
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + M ++ +N LIYG + D+ A+ ++ M GL+P +YT L+
Sbjct: 263 LAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLI 322
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+++ + ++ ++ + AE +L M GL
Sbjct: 323 DGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLR 382
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ + K GD+ + +LL +
Sbjct: 383 PDTGTYTMIINEFCKKGDVWTGSKLLKE 410
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 117/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + G+ P+ V++ L++ Y
Sbjct: 133 ECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNG------YI 186
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M ++ LI G + + M A + M GL P+
Sbjct: 187 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 246
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 306
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
GL+P +YT L+ G K GD+++ R+ + Q L + Y +I L G
Sbjct: 307 RMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 366
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
ID + M GL P TYT ++ + K GD+ + +LL +
Sbjct: 367 --IDAEKML-------------REMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKE 410
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 126/299 (42%), Gaps = 46/299 (15%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ + N +LRV D + +E GI+P VTY ++ + YC++G ++
Sbjct: 179 DVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS------YCKEGRVD 232
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M+++ ++ +N L+ G S+ ++ A+G++ M +GL SA TY L+
Sbjct: 233 QALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLI 292
Query: 202 CGYAKHG----DMDSI-----KTKIPSLKPQSELF--LCFSFQLTNLLILVSSDMASAEG 250
G+ + G D + + P+L + L LC Q+T + + S
Sbjct: 293 NGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSD------- 345
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNG--DYLDIIHALA 307
M ++ P ++ L+ GY + G + L + LV Y +IH L
Sbjct: 346 ----MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLC 401
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
+ G Y+D + M+ GL P TYT L+ G K G + R
Sbjct: 402 MWG---YLDAALRL------------KKEMTDQGLFPDIFTYTILVNGCFKLGYVSMAR 445
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 149/414 (35%), Gaps = 77/414 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN +L Y + L++++ +G PN VTY L++ +SK G +E A
Sbjct: 218 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNG---LSK---KGELEQAKG 271
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
++E M + +S +N LI G Q A ++ M P+ TY LM G
Sbjct: 272 LIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLC 331
Query: 206 KHGDMDSIKTKIPS-LKPQ---------------------SELFLCF-SFQLTNLLILVS 242
K + ++ + LK + SE FL F + +L+ V
Sbjct: 332 KWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVI 391
Query: 243 SDMASAEGILTM------------MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
+ G+ M+ GL P TYT L+ G K G + R +
Sbjct: 392 TYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEM 451
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAI--------------VCFVNICFHWL--EG 334
S + D + + G + D A V N+ H L +G
Sbjct: 452 LSKGLKPD--RFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQG 509
Query: 335 PM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YL 382
M GL P TYT ++ G+ K+G + R + + S V Y
Sbjct: 510 NFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYT 569
Query: 383 DIIHALAVSGHGE----YIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYR 432
+IHA A + Y +++ K P + +A I L ++D AY+
Sbjct: 570 VLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAI--INGLCMTRRMDEAYK 621
Score = 42.7 bits (99), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 82/214 (38%), Gaps = 11/214 (5%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
+ G P+ +TY + + CQ GN E A +LE M + ++I G
Sbjct: 488 AAGFPPDVITY------NVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFV 541
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+ + A + M G+ PS TYT L+ +A +D + +S
Sbjct: 542 KNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVI 601
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
++ + ++ M A M + G+ P+ +YT L+ G + RL +
Sbjct: 602 TYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREM 661
Query: 291 GSSLVNGDYLDIIHALAVSG-HGEYIDEVSAIVC 323
+ D H++ + H +Y +V A+ C
Sbjct: 662 LDRKIQPD--SFTHSVFLKNLHRDY--QVHAVQC 691
Score = 40.8 bits (94), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 79/195 (40%), Gaps = 12/195 (6%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P D+ YN + + D L + S G+ P+ VTY + +I+ + ++G+
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTY------TSIINGFVKNGH 545
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A ++ M K S + LI+ H+ + A + M + + + TY
Sbjct: 546 LRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNA 605
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MS 256
++ G MD ++ + L FS+ +LI S +M E L + M
Sbjct: 606 IINGLCMTRRMDEAYKYFDEMEEKGILPNKFSY---TILINESCNMGYWEEALRLYREML 662
Query: 257 QAGLEPSAQTYTKLM 271
++P + T++ +
Sbjct: 663 DRKIQPDSFTHSVFL 677
>gi|326532582|dbj|BAK05220.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 130/308 (42%), Gaps = 26/308 (8%)
Query: 88 ALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL 147
+L++++ D F +++E +GI N Y + +++ YC+ IE A +
Sbjct: 348 SLIKIFCDEGMKKEALIFQSEMEKRGIPSNTSIY------NTIMNVYCKCSQIEEAEGLF 401
Query: 148 EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 207
M++K ++ +N L+ +S+ E +L M G +P+A++Y L+ Y +
Sbjct: 402 AEMKEKGLKPTKVTYNILMDAYSRRLQPEVVESLLLEMHDLGFQPNARSYNCLISAYGRQ 461
Query: 208 GDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL--VSSDMASAEGILTMMSQAGLEPSAQ 265
M S K + L+ + S T+L+ VS A M + GL+PS +
Sbjct: 462 KKM-SEKAEDAFLRMKKGGIKATSSSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSLE 520
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVSAIVCF 324
TYT L+ + + G+ + + V + L ++ HG ++ I F
Sbjct: 521 TYTALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEF 580
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---Y 381
I GL P+A TY LM YAK G + +LL + + + D Y
Sbjct: 581 GKI-------------GLPPTAMTYNILMNAYAKGGQHYKLPQLLKEMSTLELKPDSVTY 627
Query: 382 LDIIHALA 389
+I+A A
Sbjct: 628 STLIYAYA 635
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 110/266 (41%), Gaps = 62/266 (23%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F ++ +G++ L ++ LI +C +G + A M + P + ++N
Sbjct: 330 FFQRMNRKGVK------WSLGVSASLIKIFCDEGMKKEALIFQSEMEKRGIPSNTSIYNT 383
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
++ + + + + AEG+ M + GL+P+ TY LM Y++ L+P+
Sbjct: 384 IMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTYNILMDAYSRR------------LQPE- 430
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM---- 280
E +L M G +P+A++Y L+ Y + M
Sbjct: 431 ----------------------VVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKA 468
Query: 281 -DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
D+ R + + G + Y +I A AVSG E A + +++ M +
Sbjct: 469 EDAFLR-MKKGGIKATSSSYTSLICAYAVSGQYE-----KAHIAYLD----------MKR 512
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSI 365
GL+PS +TYT L+ + + G+ + +
Sbjct: 513 EGLKPSLETYTALLDIFRRAGNTEKL 538
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 106/277 (38%), Gaps = 45/277 (16%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK 129
F + +P + S YN ++ VY A+++ +G++P +VTY +
Sbjct: 365 FQSEMEKRGIPSNTSIYNTIMNVYCKCSQIEEAEGLFAEMKEKGLKPTKVTY------NI 418
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA-SAEGILTMMSQA 188
L+ Y + E +L M D F + +N LI + + M+ AE M +
Sbjct: 419 LMDAYSRRLQPEVVESLLLEMHDLGFQPNARSYNCLISAYGRQKKMSEKAEDAFLRMKKG 478
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDS-----IKTKIPSLKPQSELFLCF------------- 230
G++ ++ +YT L+C YA G + + K LKP E +
Sbjct: 479 GIKATSSSYTSLICAYAVSGQYEKAHIAYLDMKREGLKPSLETYTALLDIFRRAGNTEKL 538
Query: 231 -----------------SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCG 273
+F + + A ++ + GL P+A TY LM
Sbjct: 539 METWKSMTDEKVGCTRVTFHMVLDGLAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNA 598
Query: 274 YAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALA 307
YAK G + +LL + + + D Y +I+A A
Sbjct: 599 YAKGGQHYKLPQLLKEMSTLELKPDSVTYSTLIYAYA 635
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 86/221 (38%), Gaps = 44/221 (19%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
++ +G++P+ TY + L+ + + GN E + + M D+ + F+ ++ G
Sbjct: 510 MKREGLKPSLETY------TALLDIFRRAGNTEKLMETWKSMTDEKVGCTRVTFHMVLDG 563
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
++ A ++ + GL P+A TY LM YAK G K+P L
Sbjct: 564 LAKHGLFVQARDVICEFGKIGLPPTAMTYNILMNAYAKGGQ----HYKLPQL-------- 611
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV---RR 285
L MS L+P + TY+ L+ YA+ D +
Sbjct: 612 -----------------------LKEMSTLELKPDSVTYSTLIYAYARVRDFSRAFYYHK 648
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVN 326
+ ++G Y +++ L V E I + SAI V
Sbjct: 649 QMVRNGQVPDAKSYRKLLNTLDVKSARENIKDKSAIAGVVK 689
>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
Length = 826
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 126/297 (42%), Gaps = 24/297 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI+ YN L+ + + L +G+ PN+++Y + LI YC+ G
Sbjct: 344 DITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSY------TPLIHVYCKQGKCL 397
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M +K P+ + AL++G A ++ A + M + G+ P A Y LM
Sbjct: 398 RAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLM 457
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCF-SFQLTNLLILVSSDMASAEGILTMMSQAGL 260
G K G + + K + + Q+ F S L + I + A+ + + G+
Sbjct: 458 NGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIR-HGKLDEAKKLFELTIAKGM 516
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL--DIIHALAVSGHGEYIDEV 318
+P Y ++ GY K G M+ + + + +GD+ + ++ + G+ + D
Sbjct: 517 DPGVVGYNAMIKGYCKFGMMNDALTCVQR----MKDGDHSPDEFTYSTIIDGYVKQNDLH 572
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
+A+ F G M+ Q +P+ TYT L+ G+ + GD + + SS
Sbjct: 573 NALKLF---------GQMVKQK-CKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSS 619
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 108/267 (40%), Gaps = 32/267 (11%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G PN V Y L+ Y + G++E A + + ++ K F + + +I G +
Sbjct: 234 KGCIPNIVFYNTLVDG------YWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCK 287
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI-PSLKPQSELFLCF 230
+ + +G+L M + G++ + Q Y ++ KHG K ++ +L+ +E
Sbjct: 288 KCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHG----CKIEVGKTLRWITENGCEP 343
Query: 231 SFQLTNLLILVSS---DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL- 286
N LI S + AE +L + GL P+ +YT L+ Y K G L
Sbjct: 344 DITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLF 403
Query: 287 --LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
+ + G L Y ++H L +G + V M + G+ P
Sbjct: 404 IGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVR---------------DKMVERGVLP 448
Query: 345 SAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
A Y LM G K G + + + LL +
Sbjct: 449 DANVYNVLMNGLCKKGRLSAAKLLLVE 475
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 41/170 (24%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
++G++P V Y +I YC+ G + A ++ M+D E ++ +I G+
Sbjct: 513 AKGMDPGVVGYNAMIKG------YCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYV 566
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+ ND+ +A + M + +P+ TYT L+ G+ + GD
Sbjct: 567 KQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDS-------------------- 606
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
+ AE M +GL+P+ TYT L+ + K G +
Sbjct: 607 ---------------SRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKI 641
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNA+++ Y + +++ P+ TY S +I Y + ++ A K
Sbjct: 523 YNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTY------STIIDGYVKQNDLHNALK 576
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M + + + +LI G + D + AE M +GL+P+ TYT L+ +
Sbjct: 577 LFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFC 636
Query: 206 KHGDM 210
K G +
Sbjct: 637 KEGKI 641
>gi|224112321|ref|XP_002316152.1| predicted protein [Populus trichocarpa]
gi|222865192|gb|EEF02323.1| predicted protein [Populus trichocarpa]
Length = 785
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 132/311 (42%), Gaps = 36/311 (11%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
+D YN L++++L+ + + +E+ + TY+ +I + + G +
Sbjct: 225 IDTETYNILMKLFLNKGLPYKAFEIYETMEAAHCSLDVSTYELMIPS------LAKSGRL 278
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A K+ + M+++ F S G+F++L+ +A + ++ + M GL PSA Y L
Sbjct: 279 DAAFKLFQEMKERNFRPSLGIFSSLVDSMGKAGRLETSMKVYMEMQGLGLRPSAIMYVSL 338
Query: 201 MCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGIL 252
+ Y K G +D+ + KI +P +F L L+I S + A I
Sbjct: 339 IESYTKAGKLDAALRLWDEMKIAGFRP--------NFGLYTLIIESHAKSGKLDIAMSIF 390
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
M +AG P+ TY+ L+ +A G +D+ +L ++ + L + H
Sbjct: 391 RDMEKAGFLPTPSTYSSLLEMHAASGQVDAAMKLYNSMTNAGLRPGLSTYTALLTLLAHK 450
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD-SIRRLLAQ 371
+ +D + I+ LE M G LM Y K G +D S+R L
Sbjct: 451 KLVDVAAKIL---------LE---MKAMGFSVDVSASDVLMV-YIKDGSVDLSLRWLRFM 497
Query: 372 NGSSLVNGDYL 382
+ S + +++
Sbjct: 498 SSSGIRTNNFI 508
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 114/312 (36%), Gaps = 64/312 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN++L Y + L K+ S G+EPN VTY S L++ C++G
Sbjct: 270 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY------SSLMNYLCKNGRST 323
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A KI + M + + L+ G++ + +L +M + G++P + L+
Sbjct: 324 EARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
C YAK +D + L FS M Q GL
Sbjct: 384 CAYAKQEKVD-------------QAMLVFS----------------------KMRQHGLN 408
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE- 317
P+ Y ++ K G +D Q + + Y +IH L + +E
Sbjct: 409 PNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEEL 468
Query: 318 ----VSAIVCFVNICF------HWLEG---------PMMSQAGLEPSAQTYTKLMCGYAK 358
+ +C I F H EG +M + G++P TY L+ G
Sbjct: 469 ILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCL 528
Query: 359 HGDMDSIRRLLA 370
G MD +LLA
Sbjct: 529 AGKMDEATKLLA 540
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 131/335 (39%), Gaps = 30/335 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFL---AKLESQGIEPNRVTYQQLISNSKLIS 132
EL D+ YN LL+ D + + L A G P+ V+Y +++
Sbjct: 156 ELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNG----- 210
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ ++G+ + A M D+ ++++I +A M A +L M + G+ P
Sbjct: 211 -FFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 269
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKP-QSELFLCFSFQLTNLLILVSSDMASAEG- 250
TY ++ GY G K I +LK +S+ ++L+ + + S E
Sbjct: 270 DCMTYNSILHGYCSSG---QPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326
Query: 251 -ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
I M++ GLEP TY L+ GYA G + + LL + + D+ +
Sbjct: 327 KIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAY 386
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
E +D+ A++ F M Q GL P+ Y ++ K G +D
Sbjct: 387 AKQEKVDQ--AMLVFSK----------MRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434
Query: 370 AQNGSSLVNGD---YLDIIHALAVSGHGEYIDEII 401
Q + + Y +IH L + +E+I
Sbjct: 435 EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELI 469
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 126/336 (37%), Gaps = 66/336 (19%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ + ++ +GI N + + +I + +C++G + + K+ + M +N
Sbjct: 467 ELILEMLDRGICLNTIFFNSIIDS------HCKEGRVIESEKLFDLMVRIGVKPDIITYN 520
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
LI G A M A +L M G++P TY L+ GY + MD
Sbjct: 521 TLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD------------ 568
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
A + M +G+ P+ TY ++ G +
Sbjct: 569 -----------------------DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAA 605
Query: 284 RRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
+ L + +SG+ L Y I+H L DE A+ F N+C
Sbjct: 606 KELYVSITKSGTQLELSTYNIILHGLC---KNNLTDE--ALRMFQNLCL----------T 650
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYI 397
L+ +T+ ++ K G MD + L A + ++ + D Y + L G E +
Sbjct: 651 DLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEEL 710
Query: 398 DEIISKIQPGVGYSADAA---NHIYHLINKGQIDAA 430
D++ ++ G SAD+ + + L+ +G I A
Sbjct: 711 DDLFLSMEEN-GCSADSRMLNSIVRKLLQRGDITRA 745
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 6/212 (2%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+ V DI YN L+ T LA + S G++P+ VTY LI+ YC
Sbjct: 509 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY------GTLINGYC 562
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ ++ A + + M + +N ++ G A+A+ + ++++G +
Sbjct: 563 RVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELS 622
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
TY ++ G K+ D +L +F + +L M A+ +
Sbjct: 623 TYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAH 682
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
S GL P +TY+ + + G ++ + L
Sbjct: 683 SANGLVPDVRTYSLMAENLIEQGSLEELDDLF 714
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C+ G+I+
Sbjct: 205 DVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTF------TTLIDGHCKTGSID 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M + F +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 259 LAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ K K +K L + ++ ++ L AE +L M G
Sbjct: 319 DGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGL--CREGQSVGAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ +LL +
Sbjct: 377 LKPDNGTYTMIINEFCKKGDVKMGSKLLKE 406
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 134/308 (43%), Gaps = 45/308 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + +M A+ + +++ GL PS ++ LM GY + GD+D
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKSAMHGSGIQPDVYT-YSVLINGL--CKESKMNDANELFDEMIGNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMD----SVRRLLAQSGS-SLVNGDYLDIIHALAVSGH----GEYIDEVSAIV 322
G+ K G +D + + +L Q S L+ Y +I+ L G + IDE
Sbjct: 249 DGHCKTGSIDLAMEAYKEMLRQGFSPDLIT--YNTLIYGLCKEGDLKQAQDLIDE----- 301
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI----RRLLAQNGSSLVN 378
MS GL+P TYT L+ G K GD+++ +R++ +N L +
Sbjct: 302 --------------MSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKEN-IRLDD 346
Query: 379 GDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVN 435
Y +I L G ++++ ++ VG D + I KG + +++
Sbjct: 347 VAYTALISGLCREGQSVGAEKMLREMLS-VGLKPDNGTYTMIINEFCKKGDVKMGSKLLK 405
Query: 436 TLARSANI 443
+ R ++
Sbjct: 406 EMQRDGHV 413
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 150/391 (38%), Gaps = 82/391 (20%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
+++ +V L NE D +++ S+GI P+ VTY S LIS +C G ++ A +
Sbjct: 233 DSMCKVKLVNE----AFDLFSEMVSKGISPDVVTY------SALISGFCILGKLKDAIDL 282
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
M + FN L+ + M + + MM + G++P+ TY LM GY
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC- 341
Query: 207 HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQT 266
+ ++ A+ I M+Q G+ P Q+
Sbjct: 342 ----------------------------------LVKEVNKAKSIFNTMAQGGVNPDIQS 367
Query: 267 YTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY----IDEVS 319
Y+ ++ G+ K D L + + D Y +I L+ SG Y +D++
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427
Query: 320 AIVCFVNIC-----------FHWLEGPM-----MSQAGLEPSAQTYTKLMCGYAKHGDMD 363
NIC H ++ + G +P TY+ L+ G + G ++
Sbjct: 428 DRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLE 487
Query: 364 SIRRLLAQNGSSLVNGDYLDI------IHALAVSGHGEYIDEIISKIQPGVGYSADAANH 417
R++ LV G LD+ I V G ++SK++ G DA +
Sbjct: 488 DARKVFE---DLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDN-GCIPDAKTY 543
Query: 418 ---IYHLINKGQIDAAYRIVN-TLARSANIN 444
I L K + D A +++ +AR +N
Sbjct: 544 EIIILSLFKKDENDMAEKLLREMIARGLPLN 574
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 6/133 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP +I YN++L L K + +G +P+ TY S LI CQ G
Sbjct: 431 VPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTY------SILIKGLCQSG 484
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A K+ E + K + + + +I G A +L+ M G P A+TY
Sbjct: 485 KLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYE 544
Query: 199 KLMCGYAKHGDMD 211
++ K + D
Sbjct: 545 IIILSLFKKDEND 557
>gi|255660886|gb|ACU25612.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 484
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ + K G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVL 314
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 82/435 (18%), Positives = 167/435 (38%), Gaps = 56/435 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G++D+
Sbjct: 264 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAAD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I G + +D++I K ++P + + +
Sbjct: 313 VLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A TL R G Q P L+R G+S +
Sbjct: 373 NPMIEYLCNNGQXXKA----ETLVRQLXKLGVQDPTALNTLIR----------GHSQE-- 416
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRL 533
G D+A+ ++ + R +B E+ LV+ +K N+P D A+ +
Sbjct: 417 ---------GSPDSAFELLKIMLRR-KVBSEKSAYNS-LVQSXLKKNEPXDAKAALDSMI 465
Query: 534 TDENLHPRAFNLAVL 548
+++L A +V+
Sbjct: 466 ENDHLPDSALFRSVM 480
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
>gi|255660890|gb|ACU25614.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 484
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ + K G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVL 314
Score = 46.2 bits (108), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 70/385 (18%), Positives = 148/385 (38%), Gaps = 39/385 (10%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G++D+
Sbjct: 264 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAAD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I +G + +D++I K ++P + + +
Sbjct: 313 VLKAMVRLSVPTEAGHYGVLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A +V L + G Q P L+R + P D+
Sbjct: 373 NPMIEYLCNNGQAAKAETLVRQLLKL----GVQDPTALNTLIRGHSQEGSP------DSX 422
Query: 474 NHIYHLINKGQIDAAYRIVNTLARS 498
+ ++ + ++D+ N+L +S
Sbjct: 423 FELLKIMLRRKVDSEKSAYNSLVQS 447
>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
Length = 886
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 116/284 (40%), Gaps = 59/284 (20%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMR-------DKTF-PISEG---- 160
G++P+R Y L+ +C+ GN++ A +I E M+ ++TF PI EG
Sbjct: 491 GLQPDRAIYNLLVE------AFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVA 544
Query: 161 -----------------------VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+NALI+G + + + A +L MS AG+ P+ TY
Sbjct: 545 GDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTY 604
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
T +M GYA GD+ +K + ++ S M SA + MS
Sbjct: 605 TIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSF 664
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY 314
+ + Y L+ G+A+ GD+ LL Q + + + I+A +G +
Sbjct: 665 QKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQR 724
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+ V M+ GL+P+ +T+T L+ G+A+
Sbjct: 725 AENVIQ---------------EMADVGLKPNVKTFTTLIKGWAR 753
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 116/289 (40%), Gaps = 61/289 (21%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
+D P+D+ Y++++ Y + +L+ G +P +IS LI+ Y +
Sbjct: 387 IDAPIDV--YHSMMHGYTVVQDEKKCLIVFERLKECGFKPT------IISYGCLINLYVK 438
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G + A I + M + ++ LI G +D A+A I M ++GL+P
Sbjct: 439 VGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAI 498
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y L+ + K G+MD A I M
Sbjct: 499 YNLLVEAFCKMGNMD-----------------------------------RAIRIFERMQ 523
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
+ ++PS +T+ ++ G+A GDM L+ +SG + Y +IH L V H
Sbjct: 524 KERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGL-VRKH-- 580
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+V V ++ MS AG+ P+ TYT +M GYA GD+
Sbjct: 581 ---QVEKAVSVLD---------KMSIAGIAPNEHTYTIIMRGYAASGDI 617
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 138/347 (39%), Gaps = 48/347 (13%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++ Y + G+ A E MR + + VF +L++ ++ A DM A + M G
Sbjct: 257 MVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEG 316
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV-------- 241
+E + TY+ L+ GY K D S LF +L NL ++
Sbjct: 317 IEMTVVTYSILISGYGKTNDAQS----------ADNLFKEAKTKLDNLNGIIYSNIIHAH 366
Query: 242 --SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVN 296
S +M AE ++ M + G++ Y +M GY D V L + G
Sbjct: 367 CQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTI 426
Query: 297 GDYLDIIH----------ALAVS----GHG-EYIDEVSAIVCFVNICFHWLEGPM----- 336
Y +I+ A+A+S HG ++ ++ +++ I H
Sbjct: 427 ISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFED 486
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV---NGDYLDIIHALAVSGH 393
M ++GL+P Y L+ + K G+MD R+ + + N + II AV+G
Sbjct: 487 MIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGD 546
Query: 394 -GEYIDEIISKIQPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLA 438
D + + G + N + H L+ K Q++ A +++ ++
Sbjct: 547 MKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMS 593
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 165/416 (39%), Gaps = 80/416 (19%)
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
+PS + + ++ YAK GD + +++ + F F V+ DM A
Sbjct: 248 KPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALS 307
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALA 307
+ M G+E + TY+ L+ GY K D S L ++ + L N + Y +IIHA
Sbjct: 308 CVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHC 367
Query: 308 VSGHGEYIDEV------SAIVCFVNICFHWLEG--------------PMMSQAGLEPSAQ 347
SG+ + +E+ I +++ + G + + G +P+
Sbjct: 368 QSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTII 427
Query: 348 TYTKLMCGYAKHGDMD---SIRRLLAQNG--------SSLVNG--DYLDIIHALAVSGHG 394
+Y L+ Y K G + +I + + +G S L+NG D +A ++
Sbjct: 428 SYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSI---- 483
Query: 395 EYIDEIISKIQPGVGYSADAANHIYHLI-----NKGQIDAAYRIVNTLARSANINGEQLP 449
+ D I S +QP D A IY+L+ G +D A RI + + E++
Sbjct: 484 -FEDMIKSGLQP------DRA--IYNLLVEAFCKMGNMDRAIRIFERMQK------ERMQ 528
Query: 450 VGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVG 509
R +++ G++ G + A+ ++ + RS +
Sbjct: 529 PSNRTFRPIIE------GFAV-----------AGDMKRAFDTLDLMRRSG--CAPTVMTY 569
Query: 510 GFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETF 565
L+ +V+ +Q ++K ++V +++ + P ++++ + D A E F
Sbjct: 570 NALIHGLVRKHQ-VEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYF 624
Score = 43.1 bits (100), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P + YN L+ + + D L +++ GI PN T+ + I+ C+ G
Sbjct: 667 IPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTF------TSYINACCKAG 720
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+++ A +++ M D + F LI G ++ + A M AGL+P Y
Sbjct: 721 DMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAY 779
>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
Length = 792
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 149/389 (38%), Gaps = 59/389 (15%)
Query: 72 VHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLI 131
V TG VP D+ Y L+ ++ + K++ G++P+ VTY L+
Sbjct: 388 VDTG---VP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLG---- 439
Query: 132 SKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
YC+ G ++ A K+ M DK FP +E + L+ G+ + +A +L M Q G+
Sbjct: 440 --YCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVS 497
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL-------ILVSSD 244
TY L+ G + ++ + + FL F T + + +
Sbjct: 498 CGDYTYNILINGL-------YMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGM 550
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
M SA G+ M + G+ P+ TYT + GY + D +LL + D
Sbjct: 551 MGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPD------ 604
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
++ + +ID ++ H+L ++ + GL P Y + GY M
Sbjct: 605 ---IAAYNAFIDTFCK-QGNMSRALHFL--VLLLKDGLTPDVTVYNSFVTGYKNLKMMAE 658
Query: 365 IRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHI--- 418
+ V D Y +I + G+ + E+ YS ANH+
Sbjct: 659 ASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALEL---------YSEMMANHVIPD 709
Query: 419 --------YHLINKGQIDAAYRIVNTLAR 439
+ L G ID A R+++ + R
Sbjct: 710 DKTFTALTHGLCRSGDIDGAKRLLDDMRR 738
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 129/358 (36%), Gaps = 91/358 (25%)
Query: 64 LPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY-- 121
L +D + TG+ +D+ L+ Y + D ++ S G+ P VTY
Sbjct: 275 LRLKDQMLLATGK---KMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGV 331
Query: 122 ------------------QQLISNSKLISKY---------CQDGNIEGATKILEFMRDKT 154
+Q+I L+S Y +D + A +LE + D
Sbjct: 332 LIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTG 391
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
P + LI+ + + A + M +AG++PS TY L+ GY + G MD
Sbjct: 392 VP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDE-- 448
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+LK SE M G P+ TYT LM GY
Sbjct: 449 ----ALKLYSE-----------------------------MPDKGFPPNEVTYTTLMKGY 475
Query: 275 AKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDE----------VSAI 321
K D+ LL Q+G S + Y +I+ L + +DE V
Sbjct: 476 IKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTT 535
Query: 322 VCFVNICFHWLEGPMMSQA----------GLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ + +I +++ MM A G+ P+ TYT + GY + D +LL
Sbjct: 536 MTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLL 593
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 105/272 (38%), Gaps = 36/272 (13%)
Query: 130 LISKYCQDGNIE-GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
++ + C G + A ++ + M E V+ I G + D A +L M +A
Sbjct: 190 VVIRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREA 249
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI-------LV 241
G EP TY+ ++ K G MD +L+ + ++ L ++ +L +
Sbjct: 250 GFEPWELTYSSVVDVLVKVGRMDE------ALRLKDQMLLATGKKMDVVLATMLMHGYCL 303
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGD 298
++ A + + G+ P+ TY L+ G G D +L Q G L +
Sbjct: 304 HGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYE 363
Query: 299 YLDIIHALAVS-------GHGEYIDEVSAIVCFVNICF-HWLEG-----------PMMSQ 339
+ +I L G E + + F C HWL M +
Sbjct: 364 FNLVIKGLLRDKRWKDAIGLLELVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKE 423
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
AG++PS TY L+ GY + G MD +L ++
Sbjct: 424 AGVKPSIVTYHSLLLGYCEKGRMDEALKLYSE 455
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 129/303 (42%), Gaps = 37/303 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + G +D
Sbjct: 135 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGF 194
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
++ L +++ + + S M A + M GL P+ T+T L+ G+
Sbjct: 195 RLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGH 254
Query: 275 AKHGDMDSV----RRLLAQS-GSSLVNGDYLDIIHALAVSGH----GEYIDEVSAIVCFV 325
K+G +D +R+L+QS L+ Y +I+ L G + IDE
Sbjct: 255 CKNGRVDFAMEIYKRMLSQSLLPDLIT--YNTLIYGLCKKGDLKQAHDLIDE-------- 304
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDYL 382
MS GL+P TYT L+ G K GD+D+ R+ + Q L + Y
Sbjct: 305 -----------MSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYA 353
Query: 383 DIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLAR 439
+I L G ++++ ++ VG D + I KG + +++ + R
Sbjct: 354 ALISGLCQEGRSVDAEKMLREMLS-VGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQR 412
Query: 440 SAN 442
+ +
Sbjct: 413 NGH 415
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 208 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF------TTLIDGHCKNGRVD 261
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 262 FAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 321
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE +L M GL+
Sbjct: 322 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLK 381
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ + K GD+ +LL +
Sbjct: 382 PDTGTYTMIINEFCKKGDVWKGSKLLKE 409
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 110/280 (39%), Gaps = 53/280 (18%)
Query: 130 LISKYCQDGNIEGATKIL-----------------------------EFMRDKTFPISEG 160
L+ ++C+DG+I A + E R K+ ++ G
Sbjct: 145 LMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASG 204
Query: 161 V------FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
V ++ LI G + + M A + M GL P+ T+T L+ G+ K+G +D
Sbjct: 205 VLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAM 264
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+ QS L ++ + D+ A ++ MS GL+P TYT L+ G
Sbjct: 265 EIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGC 324
Query: 275 AKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
K GD+D+ R+ + Q L + Y +I L G +D +
Sbjct: 325 CKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRS--VDAEKML---------- 372
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M GL+P TYT ++ + K GD+ +LL +
Sbjct: 373 ---REMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 409
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 113/289 (39%), Gaps = 24/289 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ + D ++ +GI P+ TY + +++ C+ ++ A
Sbjct: 219 YNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTY------NCVVNALCKARAMDKAEA 272
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
IL M DK +N+LIYG+S A + M+ G+ P T LM
Sbjct: 273 ILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLC 332
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
KHG + + S+ + + FS+++ + + +M G+ P +
Sbjct: 333 KHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSH 392
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIV 322
+ L+ YAK G +D + + V D Y +I AL G + D V
Sbjct: 393 IFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMD--DAVEKF- 449
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M+ Q G+ PS TY L+ G+ HGD+ + L+ Q
Sbjct: 450 -----------NQMIDQ-GVAPSISTYHFLIQGFCTHGDLLKAKDLVLQ 486
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 140/334 (41%), Gaps = 42/334 (12%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
IS Y+ L++ + + D + ++ ++G+ P+ + +I+N C+ G +
Sbjct: 461 ISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINN------LCKLGRVMD 514
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A I +F + V+N L+ G+ M +A + +M AG++P+ Y L+
Sbjct: 515 AQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVN 574
Query: 203 GYAKHGDMD---SIKTKI--PSLKPQSELFLCFSFQLTNLL---ILVSSDMASAEGILTM 254
GY K G +D S+ +I +KP + L+ N++ + + A+
Sbjct: 575 GYCKVGRIDEGLSLFREILHKGIKPSTTLY--------NIILHGLFQAGRTVPAKVKFHE 626
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
M+++G+ TY+ ++ G K+ D L + + V D + +A
Sbjct: 627 MTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRR 686
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---- 370
++E + F +I S++GL PS TY+ +M K G ++ + +
Sbjct: 687 VEEAKDL--FASI----------SRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMEN 734
Query: 371 ----QNGSSLVNGDYLDIIHALAVSGHGEYIDEI 400
Q S L+N +++ + G Y+ +I
Sbjct: 735 AGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKI 768
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 108/310 (34%), Gaps = 82/310 (26%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------ 127
+N L++ Y T ++ QG+EP+ VTY +I+
Sbjct: 394 FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMI 453
Query: 128 -----------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
LI +C G++ A ++ M +K G FN +I + +
Sbjct: 454 DQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVM 513
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236
A+ I GL P+ Y LM GY G M+
Sbjct: 514 DAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKME------------------------- 548
Query: 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSS 293
+A + +M AG++P+ Y L+ GY K G +D S+ R + G
Sbjct: 549 ----------NALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIK 598
Query: 294 LVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
Y I+H L +G V A + FH M+++G+ TY+ ++
Sbjct: 599 PSTTLYNIILHGLFQAGR-----TVPA-----KVKFHE-----MTESGIAMDRYTYSIVL 643
Query: 354 CGYAKHGDMD 363
G K+ D
Sbjct: 644 GGLFKNSCSD 653
>gi|255660872|gb|ACU25605.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 484
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELXVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVZEMKGXGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
JL M L P+ + + +L+ + K G++D+ +L
Sbjct: 277 JLKEMMDKYLAPTDNSIFMRLIXSHCKSGNLDAAADVL 314
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELXVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVZE 245
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 85/448 (18%), Positives = 169/448 (37%), Gaps = 82/448 (18%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELXVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVZEMKGXGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
+ E + E J+ MM + + +L+ + K G++D+
Sbjct: 264 GLCNAEKMSEARVJL-----------KEMMDKYLAPTDNSIFMRLIXSHCKSGNLDAA-- 310
Query: 368 LLAQNGSSLVNGDYLDIIHALAV---SGH-----------GEY------IDEIISK---I 404
D L + L+V +GH G+Y +D++I K +
Sbjct: 311 -----------ADVLKAMIRLSVPTEAGHXGXLIENFCKVGQYDKAVKLLDKLIEKDIIL 359
Query: 405 QPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVK 460
+P + + + I +L N GQ A TL R G Q P L+R
Sbjct: 360 RPQSTLHLEPSAYNPMIEYLCNNGQAXKA----ETLVRQLXKLGVQDPTALNTLIR---- 411
Query: 461 TNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTN 520
G+S + G D+A+ ++ + R ++ E+ LV+ +K N
Sbjct: 412 ------GHSQE-----------GSPDSAFELLKIMLRR-KVDSEKXAYNS-LVQSYLKKN 452
Query: 521 QPIDKVLAVCHRLTDENLHPRAFNLAVL 548
+P D A+ + +++L A +V+
Sbjct: 453 EPXDAKAALDSMIENDHLPDSALFRSVM 480
>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 484
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ + K G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVL 314
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 82/435 (18%), Positives = 168/435 (38%), Gaps = 56/435 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G++D+
Sbjct: 264 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAAD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I +G + +D++I K ++P + + +
Sbjct: 313 VLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A TL R G Q P L+R G+S +
Sbjct: 373 NPMIEYLCNNGQASKA----ETLVRQLMKLGVQDPTALNTLIR----------GHSQE-- 416
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRL 533
G D+A+ ++ + R ++ E+ LV+ +K N+P D A+ +
Sbjct: 417 ---------GSPDSAFELLKIMLRR-KVDSEK-SAYNLLVQSYLKKNEPXDAKAALDSMI 465
Query: 534 TDENLHPRAFNLAVL 548
+++L A +V+
Sbjct: 466 ENDHLPDSALFRSVM 480
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 72.8 bits (177), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 125/313 (39%), Gaps = 82/313 (26%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL------------- 124
+V ++ YN L+R + + + + + K+ + G++P+ VTY +
Sbjct: 208 NVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQA 267
Query: 125 ------ISNSK----------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ NS +I YC++G I+ A + + M+D + VFN+LI G
Sbjct: 268 EGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKG 327
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
A D +LT+M + G++P T++ +M ++ G MD + E+F
Sbjct: 328 FIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCR----------EIF- 376
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
DM A ++P A Y+ L GY + G+ + +L
Sbjct: 377 --------------DDMVKAR----------IQPDAHVYSILAKGYVRAGEPEKAEEILN 412
Query: 289 QSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
S + + + II+ +G EY AI F +C + G+ P+
Sbjct: 413 AMIKSGFHPNVVMFTTIINGWCSAGRMEY-----AIKIFEKMC----------ECGIAPN 457
Query: 346 AQTYTKLMCGYAK 358
+T+ L+ GY +
Sbjct: 458 LKTFETLIWGYGE 470
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 146/352 (41%), Gaps = 45/352 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y LL +H S ++++E G+EP+ + + + +I+ + + GN++ A K
Sbjct: 110 YTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFF------NAVINAFSESGNMQEAMK 163
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ-AGLEPSAQTYTKLMCGY 204
M++ + FN LI G+ A + ++ +L +MSQ + P+ +TY L+ +
Sbjct: 164 YFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAW 223
Query: 205 AKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
++ K L+P + ++ + + + AEGI+ M +
Sbjct: 224 CNKXNIMKAWNVVYKMVASGLQPDA-----VTYNTIATAYAQNGEASQAEGIILEMQNSN 278
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG-----------SSLVNGDYLDIIHALAV 308
++P+ +T ++ GY K G + + + + +SL+ G ++D + V
Sbjct: 279 VQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKG-FIDAVDRDGV 337
Query: 309 SGHGEYIDEVSA---IVCFVNICFHWLEGPMMS----------QAGLEPSAQTYTKLMCG 355
+ ++E ++ F I W M +A ++P A Y+ L G
Sbjct: 338 NEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKG 397
Query: 356 YAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI 404
Y + G+ + +L S + + + II+ +G EY +I K+
Sbjct: 398 YVRAGEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAIKIFEKM 449
Score = 42.7 bits (99), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 150/370 (40%), Gaps = 61/370 (16%)
Query: 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
++ + + + S +KL++ + G + IL+ + + S + L+ +
Sbjct: 65 SKTSCRTVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFD 124
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFS 231
S I++ + + G+EP + + ++ +++ G+M K K KP + F
Sbjct: 125 SIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTF---- 180
Query: 232 FQLTNLLIL---VSSDMASAEGILTMMSQ-AGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
N LI ++ + ++ +L +MSQ + P+ +TY L+ + ++ ++
Sbjct: 181 ----NTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNVV 236
Query: 288 AQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV-----------SAIVCFVNICFHWLE 333
+ +S + D Y I A A +G + + + C + I + E
Sbjct: 237 YKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKE 296
Query: 334 GPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---Y 381
G + M GL+P+ + L+ G+ D D + +L V D +
Sbjct: 297 GKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITF 356
Query: 382 LDIIHALAVSGHGEYIDEII-----SKIQPGVGYSADAANHIYHLINKGQIDA-----AY 431
I++A + +G + EI ++IQP DA H+Y ++ KG + A A
Sbjct: 357 STIMNAWSAAGFMDKCREIFDDMVKARIQP------DA--HVYSILAKGYVRAGEPEKAE 408
Query: 432 RIVNTLARSA 441
I+N + +S
Sbjct: 409 EILNAMIKSG 418
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y+ L + Y+ + L + G PN V + + +I+ +C G +E
Sbjct: 387 DAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMF------TTIINGWCSAGRME 440
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
A KI E M + + F LI+G+ +A +E +L +M + ++P T
Sbjct: 441 YAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTT 495
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 132/310 (42%), Gaps = 33/310 (10%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D K++ G+ PN TY + L+++YC +G I A + + MR++ + +N
Sbjct: 253 DLFEKMKINGLFPNLYTY------NCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYN 306
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
LI G + + AE ++ M +A + P+ TY L+ G+ G++D + + LK
Sbjct: 307 TLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSN 366
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTM---MSQAGLEPSAQTYTKLMCGYAKHGDM 280
L S N+LI S + +G+ + M G+ PS T T L+ Y + +M
Sbjct: 367 G---LSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEM 423
Query: 281 DSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
+ ++ + + D Y +IH L + G+ + E S + M
Sbjct: 424 EKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGN---MKESSKLF------------RSM 468
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ-NGSSLVN--GDYLDIIHALAVSGHG 394
+ +EPS Y ++ GY K + RLL + LV Y II L G
Sbjct: 469 GEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKW 528
Query: 395 EYIDEIISKI 404
E + ++ K+
Sbjct: 529 EEAEVLLDKM 538
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 111/289 (38%), Gaps = 28/289 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ Y D ++ +G+E N VTY LI C++ + A K
Sbjct: 270 YNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGG------MCREERVWEAEK 323
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+++ M+ + +N LI G ++ A +L + GL PS TY L+ GY+
Sbjct: 324 LVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYS 383
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS-----DMASAEGILTMMSQAGL 260
K G+ + ++ + S +L+ + +M A I + M + GL
Sbjct: 384 KAGNWKGVADLAREMEGRG-----ISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGL 438
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
P Y L+ G G+M +L G V D+I+ + G+ + + A
Sbjct: 439 VPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPS--DVIYNTMIHGYCKEDNSYRA 496
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ M GL P+ +Y+ ++ K G + LL
Sbjct: 497 LRLLRE----------MEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLL 535
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 99/241 (41%), Gaps = 9/241 (3%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E V ++ YN L+ E + + +++ + PN +TY LI +C
Sbjct: 295 ERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGG------FC 348
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
GN++ A+ +L+ ++ S +N LI G+S+A + + M G+ PS
Sbjct: 349 DVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKV 408
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T T L+ Y + +M+ S++ + + + + + + +M + + M
Sbjct: 409 TCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSM 468
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVN--GDYLDIIHALAVSGHG 312
+ +EPS Y ++ GY K + RLL + LV Y II L G
Sbjct: 469 GEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKW 528
Query: 313 E 313
E
Sbjct: 529 E 529
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 101/247 (40%), Gaps = 28/247 (11%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I C++GN++ + ++L ++D + ++ LI G + D+ A M + G
Sbjct: 168 MIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMG 227
Query: 190 LEPSAQTYTKLMCGYAKHG-DMDSI----KTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
L + T+T L+ G K G D K KI L P + C +
Sbjct: 228 LVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCG-----EGK 282
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLD 301
+ A + M + G+E + TY L+ G + + +L+ Q + V+ + Y
Sbjct: 283 ICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNT 342
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+I G+ +D+ S+++ + GL PS TY L+ GY+K G+
Sbjct: 343 LIGGFCDVGN---LDKASSLL------------DQLKSNGLSPSLVTYNILIEGYSKAGN 387
Query: 362 MDSIRRL 368
+ L
Sbjct: 388 WKGVADL 394
Score = 42.7 bits (99), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 78/210 (37%), Gaps = 12/210 (5%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
F +I G + ++ + +L ++ GL P+ YT L+ G K+GD++ + +
Sbjct: 165 FGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMG 224
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
+ ++F + + + M GL P+ TY LM Y G +
Sbjct: 225 EMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKIC 284
Query: 282 SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
L + V + + + E + E +V M +A
Sbjct: 285 RAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLV------------DQMKKAA 332
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ P+ TY L+ G+ G++D LL Q
Sbjct: 333 VSPNLITYNTLIGGFCDVGNLDKASSLLDQ 362
Score = 39.3 bits (90), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 62 GNLPCEDPFSVHTGELDV-PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVT 120
GN+ GE+ V P D+ YN ++ Y ++++ L ++E++G+ PN +
Sbjct: 456 GNMKESSKLFRSMGEMHVEPSDVI-YNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVAS 514
Query: 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
Y S +I C+DG E A +L+ M + S + N +
Sbjct: 515 Y------SSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553
>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
Length = 601
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 153/373 (41%), Gaps = 40/373 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V D+ Y L+R D + L ++ G+ PN + Y S L+ YC+ G
Sbjct: 146 VRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVY------SCLLRGYCRSG 199
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ +K+ E M +F I + + A + +M Q GLEP+ TY
Sbjct: 200 RWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYN 259
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS---DMASAEGILTMM 255
L+ K G S++ + + + N LI S +M A G+L M
Sbjct: 260 VLINCLCKEG---SVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEM 316
Query: 256 SQAG--LEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSG--SSLVNGDYLDIIHALAV 308
Q +EP T+ ++ G K G M SVR ++A+ G +LV +YL
Sbjct: 317 IQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYL-------- 368
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR-- 366
G ++ V VN+ + + + +GLEP + TY+ L+ G++K ++D
Sbjct: 369 --IGGFLR-----VHKVNMAMNLMSE--LISSGLEPDSFTYSILINGFSKLWEVDRAEMF 419
Query: 367 -RLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADA-ANHIYHLINK 424
R + Q G Y+ ++ AL G E + +++ G A A + +Y
Sbjct: 420 LRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKS 479
Query: 425 GQIDAAYRIVNTL 437
G I AA +++ +
Sbjct: 480 GDIKAAKQLLQDM 492
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 97/214 (45%), Gaps = 40/214 (18%)
Query: 114 IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
+EP+ VT+ +I C+ G + A + E M ++ + +N LI G + +
Sbjct: 323 VEPDVVTFNSVIHG------LCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVH 376
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKP---QSELF--- 227
+ A +++ + +GLEP + TY+ L+ G++K ++D + + ++ ++ELF
Sbjct: 377 KVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYI 436
Query: 228 -----LCFSFQLTNLLILV-----------------------SSDMASAEGILTMMSQAG 259
LC + ++L S D+ +A+ +L M G
Sbjct: 437 PLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEG 496
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293
L P A TY+ L+ +AK GD++ R+L Q +S
Sbjct: 497 LAPDAVTYSILINMFAKLGDLEEAERVLKQMAAS 530
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDG------HCKNGKVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+++ + ++ ++ + AE +L M GL+
Sbjct: 319 DGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P + TYT ++ + K GD+ + +LL +
Sbjct: 379 PDSGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 125/300 (41%), Gaps = 26/300 (8%)
Query: 76 ELDVPLDISHYNALL-RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
E P + +N L+ R + E S + F A + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIRLSQSVFDA-IRKWGLRPSVVSFNTLMNG------Y 181
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G+++ ++ M ++ LI G + + M A + M GL P+
Sbjct: 182 IRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNG 241
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
T+T L+ G+ K+G +D + QS ++ + D+ A ++
Sbjct: 242 VTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINE 301
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGH 311
MS GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGR 361
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P + TYT ++ + K GD+ + +LL +
Sbjct: 362 S--VDAEKML-------------REMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 21/151 (13%)
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIH 304
++ + + + GL PS ++ LM GY + GD+D RL + +S V D Y +I+
Sbjct: 155 SQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLIN 214
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
L +DE + + M GL P+ T+T L+ G+ K+G +D
Sbjct: 215 GLCKESK---MDEANELF------------XEMLDKGLVPNGVTFTTLIDGHCKNGKVDL 259
Query: 365 IRRLLAQNGSSLVNGD---YLDIIHALAVSG 392
+ Q S ++ D Y +I+ L G
Sbjct: 260 AMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 141/344 (40%), Gaps = 61/344 (17%)
Query: 68 DPFSVHTGELDVPL--DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI 125
D F +++ ++ + D+ YNAL+ + D K+ S+ I P+ T+
Sbjct: 351 DAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTF---- 406
Query: 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM 185
S L+ +C+DGNI+ A +L M ++ +++L+ G+ N++ AE I M
Sbjct: 407 --SILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTM 464
Query: 186 SQAGLEPSAQTYTKLMCGYAKHGDMDSI---------KTKIPSLKPQSELF--LCFSFQL 234
S G+ + Q+Y ++ G+ K +D K P + S L LC S ++
Sbjct: 465 SHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRI 524
Query: 235 TNLLILVSS--------DMASAEGI----------------LTMMSQAGLEPSAQTYTKL 270
+ L LV D+ + I LT + G+ P TYT L
Sbjct: 525 SYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTIL 584
Query: 271 MCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAVSGHGE--YIDEVSAIVCFVNI 327
+ G + G ++ R++ LV G LD+ + + + G + DE A++
Sbjct: 585 VKGLCQSGKLEDARKVFED---LLVKGYNLDVYAYTVMIQGFCDKGLFDEALALL----- 636
Query: 328 CFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M + G P A+TY ++ + + D +LL +
Sbjct: 637 -------SKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLRE 673
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 156/395 (39%), Gaps = 78/395 (19%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
G+L P D+ YN ++ ++H D ++ S+ I P+ TY LIS +
Sbjct: 326 GKLVQP-DVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG------F 378
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C G ++ A + M K F+ L+ G + ++ A+ +L MM + ++P
Sbjct: 379 CIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDV 438
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY+ LM GY + +++ AE I
Sbjct: 439 VTYSSLMDGYC-----------------------------------LVNEVNKAESIFNT 463
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
MS G+ + Q+Y ++ G+ K +D +L + + D Y +I L SG
Sbjct: 464 MSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGR 523
Query: 312 GEY----IDEVSA------IVCFVNICFHWLEGPMMSQA----------GLEPSAQTYTK 351
Y +DE+ I+ + +I + + +A G+ P TYT
Sbjct: 524 ISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTI 583
Query: 352 LMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDII-HALAVSGHGE--YIDE---IISKIQ 405
L+ G + G ++ R++ LV G LD+ + + + G + DE ++SK++
Sbjct: 584 LVKGLCQSGKLEDARKVFED---LLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKME 640
Query: 406 PGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
G DA + I L K + D A +++ +
Sbjct: 641 EN-GCIPDAKTYEIIILSLFEKDENDMAEKLLREM 674
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 130/306 (42%), Gaps = 43/306 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS + LM GY + GD+D
Sbjct: 138 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A M GL P+ T+T L+
Sbjct: 198 RLKSVMLASGVQPDVYT-YSVLINGL--CKESKMDDANEXFDEMLVKGLVPNGVTFTTLI 254
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + + Q S + D Y +I+ L G + ID+
Sbjct: 255 DGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDD------- 307
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+DS R+ + Q L + Y
Sbjct: 308 ------------MSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVY 355
Query: 382 LDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
+I L G + + E++S +++P G N KG + +++
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMIIN---EFCKKGDVWKGSKLLKE 412
Query: 437 LARSAN 442
+ R +
Sbjct: 413 MQRDGH 418
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 124/305 (40%), Gaps = 36/305 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + + G+ P+ ++S + L++ Y
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS------VVSXNTLMNGYI 188
Query: 136 QDGNIEGATKILEFMRDKTFPISEGV------FNALIYGHSQANDMASAEGILTMMSQAG 189
+ G+++ E R K+ ++ GV ++ LI G + + M A M G
Sbjct: 189 RLGDLD------EGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKG 242
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
L P+ T+T L+ G+ K+G +D K + QS L ++ + D+ A
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 302
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHAL 306
++ MS GL+P TYT L+ G K GD+DS R+ + Q L + Y +I L
Sbjct: 303 DLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGL 362
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G +D + M L+P TYT ++ + K GD+
Sbjct: 363 CQEGRS--VDAEKML-------------REMLSVRLKPDTGTYTMIINEFCKKGDVWKGS 407
Query: 367 RLLAQ 371
+LL +
Sbjct: 408 KLLKE 412
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 46/293 (15%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ + N +LRV D + +E GI+P VTY ++ + YC++G ++
Sbjct: 179 DVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS------YCKEGRVD 232
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M+++ ++ +N L+ G S+ ++ A+G++ M +GL SA TY L+
Sbjct: 233 QALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLI 292
Query: 202 CGYAKHG----DMDSIKTKI-----PSLKPQSELF--LCFSFQLTNLLILVSSDMASAEG 250
G+ + G D ++ + P+L + L LC Q+T + + S
Sbjct: 293 NGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSD------- 345
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNG--DYLDIIHALA 307
M ++ P ++ L+ GY + G + L + LV Y +IH L
Sbjct: 346 ----MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLC 401
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+ G Y+D + M+ GL P TYT L+ G K G
Sbjct: 402 MWG---YLDAALRL------------KKEMTDQGLFPDIFTYTILVNGCFKLG 439
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 156/427 (36%), Gaps = 93/427 (21%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------ 127
YN +L Y + L++++ +G PN VTY L++
Sbjct: 218 YNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEML 277
Query: 128 -----------SKLISKYCQDG-NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
+ LI+ +CQ G +E + E + + FP + +N L+YG + +
Sbjct: 278 NSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFP-TLSTYNTLMYGLCKWVQV 336
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-------DSIKTK--IPSLKPQSEL 226
+ M ++ P ++ L+ GY + G + D +K + +P++ + L
Sbjct: 337 TGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTL 396
Query: 227 F--LCFSFQLTNLL-------------------ILVSSD-----MASAEGILTMMSQAGL 260
LC L L ILV+ ++ A G M GL
Sbjct: 397 IHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGL 456
Query: 261 EPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
+P Y + G K D S++ + +G Y +HAL G+ E +
Sbjct: 457 KPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACD 516
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
+ LE M GL P TYT ++ G+ K+G + R + + S V
Sbjct: 517 L-------------LEN--MVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGV 561
Query: 378 NGD---YLDIIHALAVSGHGE----YIDEIISKIQPGVGYSADAANHIYHLINKGQIDAA 430
Y +IHA A + Y +++ K P + +A I L ++D A
Sbjct: 562 APSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAI--INGLCMTRRMDEA 619
Query: 431 YRIVNTL 437
Y+ + +
Sbjct: 620 YKYFDEM 626
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 82/214 (38%), Gaps = 11/214 (5%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
+ G P+ +TY + + CQ GN E A +LE M + ++I G
Sbjct: 488 AAGFPPDVITY------NVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFV 541
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+ + A + M G+ PS TYT L+ +A +D + +S
Sbjct: 542 KNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVI 601
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
++ + ++ M A M + G+ P+ +YT L+ G + RL +
Sbjct: 602 TYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREM 661
Query: 291 GSSLVNGDYLDIIHALAVSG-HGEYIDEVSAIVC 323
+ D H++ + H +Y +V A+ C
Sbjct: 662 LDRKIQPD--SFTHSVFLKNLHRDY--QVHAVQC 691
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 79/195 (40%), Gaps = 12/195 (6%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P D+ YN + + D L + S G+ P+ VTY + +I+ + ++G+
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTY------TSIINGFVKNGH 545
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A ++ M K S + LI+ H+ + A + M + + + TY
Sbjct: 546 LRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNA 605
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MS 256
++ G MD ++ + L FS+ +LI S +M E L + M
Sbjct: 606 IINGLCMTRRMDEAYKYFDEMEEKGILPNKFSY---TILINESCNMGYWEEALRLYREML 662
Query: 257 QAGLEPSAQTYTKLM 271
++P + T++ +
Sbjct: 663 DRKIQPDSFTHSVFL 677
>gi|255660874|gb|ACU25606.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 484
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ + K G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAADVL 314
Score = 46.2 bits (108), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 82/435 (18%), Positives = 168/435 (38%), Gaps = 56/435 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G++D+
Sbjct: 264 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAAD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I +G + +D++I K ++P + + +
Sbjct: 313 VLKAMIRLSVPTEAGHYGILIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A TL R G Q P L+R G+S +
Sbjct: 373 NLMIEYLCNNGQASKA----ETLVRQLMKLGVQDPTALNTLIR----------GHSQE-- 416
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRL 533
G D+A+ ++ + R ++ E+ LV+ +K N+P D A+ +
Sbjct: 417 ---------GSPDSAFELLKIMLRR-KVDSEKSAYNS-LVQSYLKKNEPXDAKAALDSMI 465
Query: 534 TDENLHPRAFNLAVL 548
+++L A +V+
Sbjct: 466 ENDHLPDSALFRSVM 480
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 211 DVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTF------TTLIDGHCKNGRVD 264
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLI 324
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K G++B+ + ++ ++ + AE +L M GL+
Sbjct: 325 DGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLK 384
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P A TYT ++ + K GD+ +LL +
Sbjct: 385 PDAXTYTMIINEFCKKGDVWKGSKLLKE 412
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 132/306 (43%), Gaps = 41/306 (13%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A + +++ GL PS +Y LM GY + GD+D
Sbjct: 138 YPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L M A + M GL P+ T+T L+
Sbjct: 198 RLKSAMXASGVQPDVYT-YSVLINGL--CKEXKMDDANELFDEMLVKGLVPNXVTFTTLI 254
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNIC 328
G+ K+G +D + Q S + D Y +I+ L G + +++
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIX-------- 306
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI----RRLLAQNGSSLVNGDYLDI 384
MS GL+P TYT L+ G K G++B+ R++ +N + D D+
Sbjct: 307 -------EMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEEN----IRLD--DV 353
Query: 385 IHALAVSG---HGEYID-EIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
+ +SG G +D E + + VG DA + I KG + +++ +
Sbjct: 354 AYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEM 413
Query: 438 ARSANI 443
R ++
Sbjct: 414 QRDGHV 419
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 118/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + + G+ P+ V+Y L++ Y
Sbjct: 135 ECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNG------YI 188
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M ++ LI G + M A + M GL P+
Sbjct: 189 RLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXV 248
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS L ++ + D+ A ++ M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEM 308
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K G++B+ R + + L + Y +I L G
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLC--QEG 366
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P A TYT ++ + K GD+ +LL +
Sbjct: 367 RXVDAEKML-------------RXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKE 412
>gi|255660864|gb|ACU25601.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 484
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 17/213 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDS 282
IL M L P+ + + +L+ + K G++D+
Sbjct: 277 ILKEMMDKYLAPTDNSIFLRLISSHCKSGNLDA 309
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 82/435 (18%), Positives = 168/435 (38%), Gaps = 56/435 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G++D+
Sbjct: 264 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNSIFLRLISSHCKSGNLDAAVD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I +G + +D++I K ++P + + +
Sbjct: 313 VLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A TL R G Q P L+R G+S +
Sbjct: 373 NPMIEYLCNNGQASKA----ETLVRQLMKLGVQDPTALNTLIR----------GHSQE-- 416
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRL 533
G D+A+ ++ + R ++ E+ LV+ +K N+P D A+ +
Sbjct: 417 ---------GSPDSAFELLKIMLRR-KVDSEKSAYNS-LVQSYLKKNEPADAKAALDSMI 465
Query: 534 TDENLHPRAFNLAVL 548
+++L A +V+
Sbjct: 466 ENDHLPDSALFRSVM 480
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 158/386 (40%), Gaps = 59/386 (15%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------ 127
YN ++ +H D K+E++GI+P+ TY LIS
Sbjct: 259 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMI 318
Query: 128 -----------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
+ LI + ++G + A K+ + M ++ + +N+LI G + +
Sbjct: 319 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 378
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236
A+ I T+M P TY L+ G+ K ++ + + S+ L + N
Sbjct: 379 EAQQIFTLMVSKDCLPDVVTYNTLIKGFCKA---KRVEEGMELFREMSQRGLVGNTVTYN 435
Query: 237 LLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQS 290
LI + D A+ I M G+ P TY+ L+ G K+G ++ V L +S
Sbjct: 436 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 495
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYT 350
Y +I + +G E W +S G++P+ YT
Sbjct: 496 KMEPNIYTYNIMIEGMCKAGKVED---------------GWDLFCSLSLKGVKPNVIIYT 540
Query: 351 KLMCGYAKHG---DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPG 407
++ G+ + G + D++ R + ++G+ +G Y +I A G E+I +++
Sbjct: 541 TMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMR-S 599
Query: 408 VGYSADAA--NHIYHLINKGQIDAAY 431
G+ DA+ + + ++++ G+++ +Y
Sbjct: 600 CGFVGDASTISMVINMLHDGRLEKSY 625
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 117/307 (38%), Gaps = 44/307 (14%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L +P + Y+ LL + L K+ G EP+ VT S L++ YC
Sbjct: 110 LGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTL------SSLLNGYCH 163
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
I A +++ M + + FN LI+G N + A ++ M G +P T
Sbjct: 164 GKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFT 223
Query: 197 YTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEG 250
Y ++ G K GD+D S+ K+ K ++ + + N +I M A
Sbjct: 224 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVV------IYNTIIDGLCKYKHMDDAFD 277
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALA 307
+ M G++P TY L+ +G RLL+ +N + + +I A A
Sbjct: 278 LFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFA 337
Query: 308 VSGH----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
G + DE M Q ++P+ TY L+ G+ H +D
Sbjct: 338 KEGKLIEAEKLFDE-------------------MIQRSIDPNIVTYNSLINGFCMHDRLD 378
Query: 364 SIRRLLA 370
+++
Sbjct: 379 EAQQIFT 385
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 96/227 (42%), Gaps = 9/227 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN+L+ + ++ + S+ P+ VTY LI +C+ +E
Sbjct: 360 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKG------FCKAKRVE 413
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
++ M + + +N LI G QA D A+ I M G+ P TY+ L+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 473
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K+G ++ L+ +++ + + + + + +S G++
Sbjct: 474 DGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 533
Query: 262 PSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHA 305
P+ YT ++ G+ + G + D++ R + + G+ +G Y +I A
Sbjct: 534 PNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRA 580
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 96/461 (20%), Positives = 168/461 (36%), Gaps = 58/461 (12%)
Query: 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEG 180
+ +I SKL+S + + + E M++ P + ++ L+ + + + A
Sbjct: 78 FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALA 137
Query: 181 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIP------SLKPQSELFLCFSFQL 234
+L M + G EP T + L+ GY HG S + KP + F
Sbjct: 138 VLGKMMKLGYEPDIVTLSSLLNGYC-HGKRISEAVALVDQMVEMGYKPDTVTF------- 189
Query: 235 TNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
N LI + + + A ++ M G +P TY ++ G K GD+D LL +
Sbjct: 190 -NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 248
Query: 292 SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
+ + +I+ + G +Y A F M G++P TY
Sbjct: 249 KGKIEANV--VIYNTIIDGLCKYKHMDDAFDLFNK----------METKGIKPDVFTYNS 296
Query: 352 LMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGH----GEYIDEIISK- 403
L+ +G RLL+ +N + + +I A A G + DE+I +
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 356
Query: 404 IQPGV--------GYSA----DAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVG 451
I P + G+ D A I+ L+ NTL + +++ G
Sbjct: 357 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGF-CKAKRVEEG 415
Query: 452 GFLVRHMVKTNQPG-VGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGG 510
L R M +Q G VG + I L G D A +I + +
Sbjct: 416 MELFREM---SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG--VPPDIITYS 470
Query: 511 FLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKA 551
L+ + K + ++K L V L + P + ++I+
Sbjct: 471 ILLDGLCKYGK-LEKALVVFEYLQKSKMEPNIYTYNIMIEG 510
>gi|255660884|gb|ACU25611.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 484
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEXMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ + K G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVL 314
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 81/435 (18%), Positives = 166/435 (38%), Gaps = 56/435 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++ ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKEXIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G++D+
Sbjct: 264 GLCNAEXMSEARVIL-----------KEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAAD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I G + +D++I K ++P + + +
Sbjct: 313 VLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A TL R G Q P L+R G+S +
Sbjct: 373 NPMIEYLCNNGQAXKA----ETLVRQLXKLGVQDPTALNTLIR----------GHSQE-- 416
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRL 533
G D+A+ ++ + R ++ E+ LV+ +K N+P D A+ +
Sbjct: 417 ---------GSPDSAFELLKIMLRR-KVDSEKSAYNS-LVQSYLKKNEPXDAKAALDSMI 465
Query: 534 TDENLHPRAFNLAVL 548
+++L A +V+
Sbjct: 466 ENDHLPDSALFRSVM 480
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 125/297 (42%), Gaps = 34/297 (11%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
++++ NAL+ + ++ T + + ++GIE + +TY +I C+D +
Sbjct: 465 VNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGC------CKDSKM 518
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A K+ M + F FN L++ + M +L M GL+P +Y +
Sbjct: 519 EEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTI 578
Query: 201 MCGYAKHGDMDSIKTKIP-----SLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGIL 252
+ G+ K D+ K + LKP ++ N LI + D++ A +
Sbjct: 579 IDGHCKAKDIRKAKEYLTELMDRGLKPNVFIY--------NALIGGYGRNGDISGAIDAV 630
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
M G++P+ TY LM G ++ + + +Q+ + N D I + + + G+
Sbjct: 631 ETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQAREN--NVDLGVIGYTIMIQGYC 688
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ V A+ F M G+ P+ TYT LM Y+K G+ + +L
Sbjct: 689 KLGKMVEAVAYFEE----------MRSRGISPNKLTYTTLMYAYSKSGNSEEASKLF 735
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 97/500 (19%), Positives = 186/500 (37%), Gaps = 95/500 (19%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+V L+ Y A+++ + + LA+L G++P VTY + L+ C+
Sbjct: 216 NVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTY------NVLMDALCKS 269
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G +E A ++ M S F LI G ++ +L M Q G+ P+ Y
Sbjct: 270 GRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIY 329
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
+L+ + + G + +L + ++L
Sbjct: 330 NELIGWHCRKGHCSQ------------------ALRLFDEMVLKK--------------- 356
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS---GSSLVNGDYLDIIHALAVSGHGEY 314
++P+A TY + K G+M+ R+L G ++ G + ++ L +
Sbjct: 357 --MKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLL-----QR 409
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM---CGYAKHGDMDSI--RRLL 369
+ ++V N M G+ P+ T M C KH + I + L
Sbjct: 410 TRRLESVVSITN---------EMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLN 460
Query: 370 AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG-QID 428
G +L + L IH L G+Y+ E IQ ++NKG ++D
Sbjct: 461 KGLGVNLATSNAL--IHGLC---EGKYMKEATKVIQT--------------MLNKGIELD 501
Query: 429 A-AYRI-VNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQID 486
+ Y I + + + + E + + G + R K + ++ + H Y N G+++
Sbjct: 502 SITYNIMIRGCCKDSKME-EAIKLHGDMTRRGFKPDL----FTFNTLLHAY--CNLGKME 554
Query: 487 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLA 546
+ +++ + ++ + + + G + H + I K L D L P F
Sbjct: 555 ETFHLLDQM-KTEGLQPDIVSYGTIIDGHC--KAKDIRKAKEYLTELMDRGLKPNVFIYN 611
Query: 547 VLIKAHVLKEDYTGAVETFE 566
LI + D +GA++ E
Sbjct: 612 ALIGGYGRNGDISGAIDAVE 631
Score = 40.0 bits (92), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 20/218 (9%)
Query: 156 PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT 215
P S+ + + I +Q + + A ++S G PS +T + + G +D+ +
Sbjct: 148 PSSDFLIHTFITSPAQGS-LCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAARE 206
Query: 216 KIPSLKPQSELFLC-FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
++ + L +S+ + + + + +L + +AGL+P+ TY LM
Sbjct: 207 VFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDAL 266
Query: 275 AKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
K G ++ RL + Q G + + +I+ LA GE EV ++
Sbjct: 267 CKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLA---RGERFGEVGIVL--------- 314
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
M Q G+ P+ Y +L+ + + G RL
Sbjct: 315 ---QEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLF 349
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/446 (22%), Positives = 180/446 (40%), Gaps = 59/446 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ L++ N ++ + FL +E +GI + VTY + LI+ YC++G
Sbjct: 181 IELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTY------NTLINAYCREG 234
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A +++ M K + +NA+I G + A+G+ M GL P TY
Sbjct: 235 LLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYN 294
Query: 199 KLMCGYAKHGDMDSIKTKIPSL--KPQSELFLCFSFQLTNLLILVSSDMASAEGILTM-- 254
L+ ++ + K + + S + FS LI VSS + L
Sbjct: 295 TLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSS-----LIGVSSRNGHLDQALMYFR 349
Query: 255 -MSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALA--- 307
M +GL P YT L+ GY ++G M +R + + G +L Y I++ L
Sbjct: 350 DMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKK 409
Query: 308 -VSGHGEYIDEVSAIVCFVNICF-------HWLEGPM---------MSQAGLEPSAQTYT 350
++ DE+ + C H EG M M+Q ++P TY
Sbjct: 410 LLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYN 469
Query: 351 KLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGY 410
L+ G+ K +M+ L + S + ++ I +A+ V+G+ +G+
Sbjct: 470 ILIDGFCKTTEMEKANELWNEMISRKIFPNH--ISYAILVNGY------------CNLGF 515
Query: 411 SADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSA 470
++A +I KG I NT+ + +G+ FL + + GVG +
Sbjct: 516 VSEAFRLWDEMIRKG-IKPTLVTCNTVIKGYCRSGDLSKADEFLGKMI----SEGVGPDS 570
Query: 471 DAANHIYHLINKGQ-IDAAYRIVNTL 495
N + + KG+ +D A+ ++N +
Sbjct: 571 ITYNTLINGFVKGEYMDKAFFLINKM 596
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 153/367 (41%), Gaps = 75/367 (20%)
Query: 64 LPCEDPFS--VHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
L +D FS +H G V D+ +++L+ V N H + +++ G+ P+ V Y
Sbjct: 307 LEAKDIFSDMLHRG---VSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIY 363
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
+ LI+ YC++G + A +I + M ++ + +N ++ G + +A A +
Sbjct: 364 ------TILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANAL 417
Query: 182 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS------IKTKIPSLKPQSELF------LC 229
M + G+ P T+T L+ G+ K G+M I T+ ++KP + C
Sbjct: 418 FDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQ-KNIKPDIVTYNILIDGFC 476
Query: 230 FSFQL-------------------TNLLILVSS-----DMASAEGILTMMSQAGLEPSAQ 265
+ ++ + ILV+ ++ A + M + G++P+
Sbjct: 477 KTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLV 536
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG--HGEYIDEVSAIVC 323
T ++ GY + GD+ L + S V D I + ++G GEY+D+ ++
Sbjct: 537 TCNTVIKGYCRSGDLSKADEFLGKMISEGVGPD--SITYNTLINGFVKGEYMDKAFFLI- 593
Query: 324 FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNG------- 373
M GL+P TY ++ G+ + G M I R + + G
Sbjct: 594 -----------NKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRST 642
Query: 374 -SSLVNG 379
++L+NG
Sbjct: 643 YTTLING 649
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 101/238 (42%), Gaps = 21/238 (8%)
Query: 54 CSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQG 113
C E ++G F + T + ++ DI YN L+ + + ++ S+
Sbjct: 441 CKEGNMGKA----LSLFGIMT-QKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRK 495
Query: 114 IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
I PN ++Y + L++ YC G + A ++ + M K + N +I G+ ++
Sbjct: 496 IFPNHISY------AILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSG 549
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFL 228
D++ A+ L M G+ P + TY L+ G+ K MD K + L+P +
Sbjct: 550 DLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPD---VV 606
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
++ L M AE IL M + G++P TYT L+ GY ++ R
Sbjct: 607 TYNVILNGFC--RQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRF 662
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 133/317 (41%), Gaps = 56/317 (17%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN LL + L +++ +G+ P+ T+ + LI YC+DGN E
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTF------TTLIHGYCRDGNFE 419
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + + + +N+LI G + D+A A + M + P+ TY+ L+
Sbjct: 420 KALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILI 479
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+ + G ++ A G L M G
Sbjct: 480 DSHCEKGQVEE-----------------------------------AFGFLDEMVSKGNL 504
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P+ TY ++ GY + G++ ++ L + ++ + L + HG YI E +
Sbjct: 505 PNIMTYNSIIKGYCRSGNVKKGQQFLQK----MMQDNILPDLITFNTLIHG-YIKEENMH 559
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD- 380
F N+ F+ +E M ++P A TY ++ G+++ G+M+ R+ + G+S + D
Sbjct: 560 GAF-NV-FNIMEKEM-----VQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDR 612
Query: 381 --YLDIIHALAVSGHGE 395
Y+ +I+ +G+ +
Sbjct: 613 YTYMSLINGHVTAGNSK 629
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 109/272 (40%), Gaps = 37/272 (13%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI +C+ G +E A K + M+ + F+ LI S M A L M G
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL--FLCFSFQLT-NLL---ILVSS 243
L P YT ++ G+ + G M +L+ + E+ C +T N L +
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSE------ALRVRDEMVGLGCLPDVVTYNTLLNGLCKQH 381
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YL 300
+ AE +L M + G+ P T+T L+ GY + G+ + +L + D Y
Sbjct: 382 RLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYN 441
Query: 301 DIIHALAVSGH----GEYIDEVSAIVCFVN-------ICFHWLEG----------PMMSQ 339
+I + G E D++ A F N I H +G M+S+
Sbjct: 442 SLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSK 501
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
L P+ TY ++ GY + G++ ++ L +
Sbjct: 502 GNL-PNIMTYNSIIKGYCRSGNVKKGQQFLQK 532
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 66/349 (18%), Positives = 129/349 (36%), Gaps = 42/349 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++ YC+ + A ++ M + N LI +A D+ +A ++ M+ G
Sbjct: 163 MVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKG 222
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
L+P T+ ++ G KH D K ++ S SF + ++ A
Sbjct: 223 LKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAM 282
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNGDYLDIIHALAV 308
M Q G+ P +++ L+ ++ G MD L + G LV +I+ + +
Sbjct: 283 KFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPD---GVIYTMVI 339
Query: 309 SGHG---------EYIDEVSAIVCFVNICFH--WLEGPM--------------MSQAGLE 343
G DE+ + C ++ + L G M + G+
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVT 399
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEI 400
P T+T L+ GY + G+ + +L + D Y +I + G +E+
Sbjct: 400 PDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANEL 459
Query: 401 ISKIQPGVGYSADAANHIYHLI------NKGQIDAAYRIVNTLARSANI 443
+ + NH+ + I KGQ++ A+ ++ + N+
Sbjct: 460 WDDMHAREIF----PNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNL 504
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ +N L+ Y+ E+ + +E + ++P+ VTY +I+ + + GN+E
Sbjct: 541 DLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIING------FSEQGNME 594
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
A ++ + M + +LI GH A + A + M G P
Sbjct: 595 EAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/311 (21%), Positives = 131/311 (42%), Gaps = 24/311 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N+LL+V + + D EP+ +Y +IS +C G++ A +
Sbjct: 80 WNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISG------FCNAGDLHAALE 133
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+LE M+ F +I + A D+ +G + + G +P+ TYT L+ +A
Sbjct: 134 LLEEMKSAGFAPDAFTHTPIITAMANAGDL---DGAMDHLRSMGCDPNVVTYTALIAAFA 190
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ ++ + ++ + ++ + + S + +A+ ++ M + G P+
Sbjct: 191 RAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVM 250
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
T+ L+ G+ K G++D R+LL G + G +++ + ID + F+
Sbjct: 251 TFNSLVDGFCKRGNVDDARKLL---GIMVAKGMRPNVVT------YSALIDGLCKSQKFL 301
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YL 382
LE M G+ P A TY+ L+ G K ++ ++L + S D Y
Sbjct: 302 EA-KEVLEE--MKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 358
Query: 383 DIIHALAVSGH 393
IIHA SG
Sbjct: 359 SIIHAFCKSGK 369
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 162/414 (39%), Gaps = 45/414 (10%)
Query: 73 HTGELDVPLD----------ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQ 122
+ G+LD +D + Y AL+ + + L ++ +G PN VTY
Sbjct: 159 NAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTY- 217
Query: 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGIL 182
+ L+ C+ + A +++ M + F + FN+L+ G + ++ A +L
Sbjct: 218 -----NVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLL 272
Query: 183 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
+M G+ P+ TY+ L+ G K K + +K + F++ + +
Sbjct: 273 GIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKA 332
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---Y 299
+ AE +L M+ +G P Y+ ++ + K G + ++ L + + D Y
Sbjct: 333 DKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTY 392
Query: 300 LDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG-LEPSAQTYTKLMCGYAK 358
+I L G I E I+ M ++G + P TY+ ++ G K
Sbjct: 393 NTVIDGLCKLGK---IAEAQVIL------------EQMQESGDVLPDVVTYSTVINGLCK 437
Query: 359 HGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA 415
+ ++LL + + N D Y II L G E + ++ ++ G + +
Sbjct: 438 SDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRA-GCAPNVV 496
Query: 416 NH---IYHLINKGQIDAAYRIVNTLARSA---NINGEQLPVGGFLVRHMVKTNQ 463
+ I L ++D A R++ + + N+ V G V +K Q
Sbjct: 497 TYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQ 550
>gi|388500892|gb|AFK38512.1| unknown [Medicago truncatula]
Length = 249
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 52/239 (21%)
Query: 53 WCSEPSLGPGNLPCEDPFSVHTGELDVPL--DISHYNALLRVYLDNEHTFSPTDFLAKLE 110
WC++ L E+ ++V ++ + DI YN L R + N T + + K++
Sbjct: 27 WCTKNEL-------EEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQ 79
Query: 111 --SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ ++PN T +I YC++GN+ A + L M++ + VFN+LI G
Sbjct: 80 QYNNKVKPNERTC------GIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKG 133
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
+ D E LT+M + G++P TY+ +M ++ G MD+ + E+F
Sbjct: 134 YLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCE----------EIF- 182
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
DM AE +EP Q Y+ L GY + G D LL
Sbjct: 183 --------------DDMVKAE----------IEPDIQAYSILAKGYVRAGQPDKAEALL 217
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 25/233 (10%)
Query: 145 KILEF-MRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
K+LE ++D +E +N LI N++ A ++ M +G++P TY L
Sbjct: 2 KLLEMTIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARA 61
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL----VSSDMASAEGILTMMSQAG 259
+A++G+ D+ + I LK Q + T +I+ +M A L M + G
Sbjct: 62 FAQNGETDNAERLI--LKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELG 119
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYID 316
+ P+ + L+ GY D D V L + D Y I++A + SG + +
Sbjct: 120 VHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCE 179
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
E+ F + M +A +EP Q Y+ L GY + G D LL
Sbjct: 180 EI-----FDD----------MVKAEIEPDIQAYSILAKGYVRAGQPDKAEALL 217
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 11/151 (7%)
Query: 53 WCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ 112
+C E GN+ F EL V + +N+L++ YLD T + L +E
Sbjct: 99 YCKE-----GNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEF 153
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
GI+P+ VTY S +++ + G ++ +I + M ++ L G+ +A
Sbjct: 154 GIKPDVVTY------STIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRA 207
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
AE +L M++ GL+ + +T ++ G
Sbjct: 208 GQPDKAEALLNSMTKYGLQANVVIFTTIISG 238
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 155/417 (37%), Gaps = 80/417 (19%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ YL + + + ++G PN +TY + LI YC+ GNIE A +
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY------TALIDGYCKSGNIEKACQ 615
Query: 146 ILEFMR--------DKTFPISEGV--------FNALIYGHSQANDMASAEGILTMMSQAG 189
I MR D F I V + AL+ G +A+ + A +L M G
Sbjct: 616 IYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDG 675
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKI---------PSLKPQSELF-LCFSFQLTNLLI 239
EP+ Y L+ G+ K +D + P++ S L F + +L++
Sbjct: 676 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVL 735
Query: 240 LVSSDMA-------------------------SAEGILTMMSQAGLEPSAQTYTKLMCGY 274
V S M A ++ MM + G +P+ TYT ++ G+
Sbjct: 736 KVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGF 795
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
K G +D L + GS +++ +I+ +GH +DE A++
Sbjct: 796 GKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGH---LDEAYALL--------- 843
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD-SIRRLLAQNGSSLVNGDYLDIIHALAV 390
M Q +Y K++ GY + + + + +NGS+ Y +I
Sbjct: 844 ---EEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVK 900
Query: 391 SGHGEYI----DEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANI 443
+G E E+IS + IY +ID A+ + + R I
Sbjct: 901 AGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVI 957
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 143/392 (36%), Gaps = 62/392 (15%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L+ +E + PN + Y +K+IS C+ E A L MR + + + L
Sbjct: 296 LSLIEKEDFVPNTILY------NKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRIL 349
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
+ G + + IL+MM G PS + L+ Y K D S K+ LK +
Sbjct: 350 LCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF-SYAYKL--LKKMEK 406
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTM---------MSQAGL---EPSAQTYTKLMCG 273
+ + N+LI G +T M AG + + ++ + +CG
Sbjct: 407 CECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCG 466
Query: 274 YAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA--------------VSGHGEYIDEVS 319
+ K V + +G Y ++I L + G G D +
Sbjct: 467 FGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYT 526
Query: 320 AIV---CF-----VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM---DSIRRL 368
+ CF + +WL+ M + G EP+ TYT L+ Y K + + + L
Sbjct: 527 YTILIDCFSKAGIIKQAHNWLDE--MVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEL 584
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQID 428
+ G Y +I SG+ E +I ++++ AD + +D
Sbjct: 585 MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRG----DADIPD----------VD 630
Query: 429 AAYRIVNTLARSANINGEQLPVGGFLVRHMVK 460
++I N +A N+ V G H VK
Sbjct: 631 MYFKIKNNVAEKPNVVTYGALVDGLCKAHKVK 662
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 108/297 (36%), Gaps = 69/297 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N+L+ Y ++ L K+E +P V Y LI + C G + G
Sbjct: 381 FNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGS------ICSGGELPGPV- 433
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
TF ++E + N+M SA +L + + ++ + +CG+
Sbjct: 434 --------TFELAEKAY----------NEMLSAGTVLNKV-------NVVSFARCLCGFG 468
Query: 206 KHGDMDSIKTK------IPSLKPQSEL--FLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
K + + +P SE+ FLC + ++ N L M
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKE-----------MKG 517
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEY 314
G+ P TYT L+ ++K G + L + G Y +IHA +
Sbjct: 518 TGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSV 577
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+E+ +M G P+ TYT L+ GY K G+++ ++ A+
Sbjct: 578 ANELFE---------------LMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYAR 619
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 21/209 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y ALL V+ + P +FL ++ E +L++ LI K C++G A +
Sbjct: 174 YIALLDVFERGSYDRVPEEFLREIRGDDKE----VLGKLLN--VLIRKCCRNGLWNVALE 227
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL---EPSAQTYTKLMC 202
L ++D + + +NAL+ +A+ + +A+ + MS+ GL E + + + +C
Sbjct: 228 ELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALC 287
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAG 259
K + S+ K P + L+ N +I +S A L M
Sbjct: 288 KVGKWREALSLIEK-EDFVPNTILY--------NKMISGLCEASFFEEAMDFLNRMRSTS 338
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
P+ QTY L+CG + +R+L+
Sbjct: 339 CIPNVQTYRILLCGCLNKKQLGRCKRILS 367
>gi|147779268|emb|CAN70089.1| hypothetical protein VITISV_038171 [Vitis vinifera]
Length = 838
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 141/353 (39%), Gaps = 50/353 (14%)
Query: 82 DISHYNALLRVYLDNE-HTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ YN L+ Y + + + +L LE++ + P TY + L+ YC G +
Sbjct: 97 DVICYNLLIDAYGQKSLYKKAESTYLELLEARCV-PTEDTY------ALLLKAYCTSGLL 149
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A + MR FP S V+NA I G + D A I M + +PS TYT L
Sbjct: 150 EKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTML 209
Query: 201 MCGYAKHG----------DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
+ Y K +M S K K P++ + L F+ + AE
Sbjct: 210 INLYGKASKSYMALKVFHEMRSQKCK-PNICTFTALVNAFARE---------GLCEKAEE 259
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
I + +AGLEP Y LM Y++ G + L+ G Y ++ A
Sbjct: 260 IFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 319
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
+G E V + M + G+ P+ +++ L+ Y++ G +
Sbjct: 320 RAGLHEDAQAVFEV---------------MKRLGITPTMKSHMLLLSAYSRAGKVAKCEE 364
Query: 368 LLAQNGSSLVNGDYL---DIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH 417
++ Q S + D +++ G E ++E+++ ++ G Y AD + +
Sbjct: 365 IVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKG-PYPADISTY 416
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I Y+AL +V L + K+ S+GIEP R T+ ++ +
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N ++ G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDRVDDALRFVEEMKGFGMKPNAITYSTLLPGLCN-----AEKMSEARS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M + P+ + + +L+ G K GD+D+ +L
Sbjct: 277 ILKEMVDKYIAPTDNSIFMRLISGQCKAGDLDAAANVL 314
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 160/411 (38%), Gaps = 56/411 (13%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G ++ + K+ + M + + ++AL + A+ M G
Sbjct: 86 MIDSYGKAGIVQESVKMFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMASA 248
+EP+ T+ +M G+ G +++ +K + + ++ + N V M A
Sbjct: 146 IEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMVNGYCRVKK-MEEA 204
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
E M +EP+ TYT L+ GY +D R + + + + + L
Sbjct: 205 EKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRFVEEMKGFGMKPNAITYSTLLPG 264
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT-YTKLMCGYAKHGDMDS--- 364
+ E + E +I+ M + P+ + + +L+ G K GD+D+
Sbjct: 265 LCNAEKMSEARSIL------------KEMVDKYIAPTDNSIFMRLISGQCKAGDLDAAAN 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I +G + +D++I K ++P +++ +
Sbjct: 313 VLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILRPQSTLHMESSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A +V L + G Q P L+R G+S +
Sbjct: 373 NPLIEYLCNNGQTAKAEALVRQLMKL----GVQDPTALNTLIR----------GHSQE-- 416
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPID 524
G D+A+ ++ + R ++ EQ LV+ +K N+P D
Sbjct: 417 ---------GSPDSAFELLKIMLRR-KVDSEQSAYDS-LVQSYLKKNEPAD 456
>gi|255660896|gb|ACU25617.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 484
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + +L+ + K G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNXIFMRLISSHCKSGNLDAAADVL 314
Score = 46.6 bits (109), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 82/435 (18%), Positives = 167/435 (38%), Gaps = 56/435 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G++D+
Sbjct: 264 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNXIFMRLISSHCKSGNLDAAAD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I G + +D++I K ++P + + +
Sbjct: 313 VLKAMIRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A TL R G Q P L+R G+S +
Sbjct: 373 NPMIEYLCNNGQAXKA----ETLVRQLXKLGVQDPTALNTLIR----------GHSQE-- 416
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRL 533
G D+A+ ++ + R ++ E+ LV+ +K N+P D A+ +
Sbjct: 417 ---------GSPDSAFELLKIMLRR-KVDSEKSAYNS-LVQSYLKKNEPXDAKAALDSMI 465
Query: 534 TDENLHPRAFNLAVL 548
+++L A +V+
Sbjct: 466 ENDHLPDSALFRSVM 480
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 136/337 (40%), Gaps = 36/337 (10%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D+P DI +L+R + T T + +E G P+ +TY LIS C
Sbjct: 115 DIP-DIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISG------MCST 167
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G A K+L M + S FN LI + + A +L M + G P++ +Y
Sbjct: 168 GRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSY 227
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT--NLLILVSSD--MASAEGILT 253
L+ G+ K M+ + + + C+ +T LL + D + +A +L
Sbjct: 228 NPLLHGFCKEKKMERAIEYLGKMTSRG----CYPDIVTYNTLLTALCKDGKVDAAVELLN 283
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSG 310
+S G P TY ++ G +K G D +LL + + + D Y ++ L+ G
Sbjct: 284 QLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREG 343
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+DE FH LE G++P+A TY +M G K D LA
Sbjct: 344 K---VDEAIKF-------FHDLE-----VLGVKPNAITYNAIMLGLCKARKTDRAIDFLA 388
Query: 371 ---QNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI 404
Q G Y +I LA G + E+++++
Sbjct: 389 YMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425
>gi|356513567|ref|XP_003525484.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 857
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 124/292 (42%), Gaps = 27/292 (9%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI-- 140
+ Y A++ Y N + + L ++ + + P+ +TY +I+ C G +
Sbjct: 169 VYSYTAIINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINA-------CARGGLDW 221
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
EG + MR + +N L+ + AE + M+++G+ P TY+ L
Sbjct: 222 EGLLGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYL 281
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS---AEGILTMMSQ 257
+ + K ++ + + ++ L S+ N+L+ +++ S A G+ M
Sbjct: 282 VQTFGKLNRLEKVSELLREMECGGNLPDITSY---NVLLEAYAELGSIKEAMGVFRQMQA 338
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
AG +A TY+ L+ Y KHG D VR L + S + D + V G G Y E
Sbjct: 339 AGCVANAATYSVLLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKE 398
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
V + FH M++ +EP+ QTY L+ K G + +++L
Sbjct: 399 VVTL-------FH-----DMAEENVEPNMQTYEGLIFACGKGGLYEDAKKIL 438
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 60/319 (18%), Positives = 118/319 (36%), Gaps = 59/319 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI- 140
D YN L++V+ + + + + +EPN TY+ LI C G +
Sbjct: 379 DAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLIFA-------CGKGGLY 431
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A KIL M +K S + +I QA A + M++ G P+ +TY L
Sbjct: 432 EDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALVMFNTMNEVGSNPTVETYNSL 491
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ +A+ G L+ AE IL+ M+++GL
Sbjct: 492 IHAFARGG-----------------LY------------------KEAEAILSRMNESGL 516
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
+ ++ ++ + + G + + + + + L + L++ +DE
Sbjct: 517 KRDVHSFNGVIEAFRQGGQYEEAVKSYVEMEKANCEPNELTLEAVLSIYCSAGLVDEGEE 576
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD 380
+ + +G+ PS Y ++ YAK+ ++ L+ +++
Sbjct: 577 ------------QFQEIKASGILPSVMCYCMMLALYAKNDRLNDAYNLI----DAMITMR 620
Query: 381 YLDIIHALAVSGHGEYIDE 399
DI + G++ DE
Sbjct: 621 VSDIHQVIGQMIKGDFDDE 639
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 107/294 (36%), Gaps = 42/294 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI+ YN LL Y + ++++ G N TY S L++ Y + G +
Sbjct: 309 DITSYNVLLEAYAELGSIKEAMGVFRQMQAAGCVANAATY------SVLLNLYGKHGRYD 362
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ M+ G +N LI + + M++ +EP+ QTY L+
Sbjct: 363 DVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMAEENVEPNMQTYEGLI 422
Query: 202 CGYAKHG---DMDSI------KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
K G D I K +PS K + + F LV +
Sbjct: 423 FACGKGGLYEDAKKILLHMNEKGVVPSSKAYTGVIEAFGQAALYEEALV---------MF 473
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVS 309
M++ G P+ +TY L+ +A+ G +L++ S + D + +I A
Sbjct: 474 NTMNEVGSNPTVETYNSLIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIEAFRQG 533
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
G E A+ +V M +A EP+ T ++ Y G +D
Sbjct: 534 GQYE-----EAVKSYVE----------MEKANCEPNELTLEAVLSIYCSAGLVD 572
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 121/293 (41%), Gaps = 42/293 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN ++R + F+ K+E +GI PN VTY LI S C+ ++
Sbjct: 206 NVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDAS------CKKKKVK 259
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L M + +N++I G M+ ++ M GL P TY L+
Sbjct: 260 EAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLV 319
Query: 202 CGYAKHGDMDS---------IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
G+ K G++ K P++ + L C + + +++ A I
Sbjct: 320 NGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINC---------MCKAGNLSRAVEIF 370
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVS 309
M GL P+ +TYT L+ G+ + G M+ ++L++ SG S Y ++H
Sbjct: 371 DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFL 430
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
G + E I L G M + GL P +Y+ ++ G+ + ++
Sbjct: 431 GR---VQEAVGI----------LRG--MVERGLPPDVVSYSTVIAGFCREREL 468
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 126/332 (37%), Gaps = 63/332 (18%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP +++ YN L+ + + L+++ +G+ PN VTY + LI+ C+ G
Sbjct: 309 VPDEVT-YNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTY------TTLINCMCKAG 361
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A +I + MR + +E + LI G Q M A +L+ M +G PS TY
Sbjct: 362 NLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYN 421
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ GY CF + A GIL M +
Sbjct: 422 ALVHGY------------------------CF-----------LGRVQEAVGILRGMVER 446
Query: 259 GLEPSAQTYTKLMCGYAKH---GDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
GL P +Y+ ++ G+ + G ++ + + G Y +I L +
Sbjct: 447 GLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQ----- 501
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQN 372
V A F M + GL P TYT L+ Y G++ RL + Q
Sbjct: 502 KLVEAFDLFRE----------MMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQR 551
Query: 373 GSSLVNGDYLDIIHALAVSGHGEYIDEIISKI 404
G N Y +I+ L + ++ K+
Sbjct: 552 GFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 106/287 (36%), Gaps = 33/287 (11%)
Query: 88 ALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL 147
AL ++L N H F+PT V + ++ L + + A ++
Sbjct: 151 ALTLLHLANRHGFAPT---------------VLSYNAVLDALLRRSSSNHRDYDDAERVF 195
Query: 148 EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 207
M + +N +I G D+ G + M + G+ P+ TY L+ K
Sbjct: 196 RDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKK 255
Query: 208 GDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTY 267
+ + ++ S+ + M+ ++ M GL P TY
Sbjct: 256 KKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTY 315
Query: 268 TKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF 324
L+ G+ K G++ LL++ G S Y +I+ + +G+ E+
Sbjct: 316 NTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIF----- 370
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M GL P+ +TYT L+ G+ + G M+ ++L++
Sbjct: 371 ----------DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSE 407
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 73/176 (41%), Gaps = 15/176 (8%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSK---------LISKYCQDGNIEGATKILEFMRDKTF 155
L KL + P+ VTY LI N L+ +C G + A ++ + M +
Sbjct: 579 LLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNH 638
Query: 156 PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT 215
+ ++N +I+GHS+ ++ A + + + L+ A+ G D +
Sbjct: 639 KPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSR 698
Query: 216 KIPSLKPQSELFLCFSFQLTNLLILVS---SDMASAEGILTMMSQAGLEPSAQTYT 268
+ ++ L ++ +L+ V+ +M + +LT M++ GL P ++
Sbjct: 699 LLQNILRSCRL---NDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHS 751
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 133/307 (43%), Gaps = 43/307 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + +M A+ + +++ GL PS ++ LM GY + GD+D
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKSAMHASGVQPDVYT-YSVLINGL--CKESKMNDANELFGEMIGNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMD----SVRRLLAQSGS-SLVNGDYLDIIHALAVSGH----GEYIDEVSAIV 322
G+ K G +D + + +L Q S L+ Y +I+ L G + IDE
Sbjct: 249 DGHCKTGSIDLAMETYKEMLRQGFSPDLIT--YNTLIYGLCKKGDLKQAQDLIDE----- 301
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNG 379
MS GL+P TYT L+ G K GD+++ R+ + + L +
Sbjct: 302 --------------MSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDV 347
Query: 380 DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNT 436
Y +I L G ++++ ++ VG D + I KG + +++
Sbjct: 348 AYTALISGLCREGQSVDAEKMLREMLS-VGLKPDNGTYTMIINEFCKKGDVKTGSKLLKE 406
Query: 437 LARSANI 443
+ R ++
Sbjct: 407 MQRDGHV 413
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C+ G+I+
Sbjct: 205 DVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTF------TTLIDGHCKTGSID 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M + F +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 259 LAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ + + +K L + ++ ++ L AE +L M G
Sbjct: 319 DGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGL--CREGQSVDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +LL +
Sbjct: 377 LKPDNGTYTMIINEFCKKGDVKTGSKLLKE 406
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ + + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +LL +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 129/305 (42%), Gaps = 43/305 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ L PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+++ R+ + + L + Y
Sbjct: 302 ------------MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 382 LDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
+I L G + + E++S ++P +G N KG + +++
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLLKE 406
Query: 437 LARSA 441
+ R
Sbjct: 407 MQRDG 411
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 120/299 (40%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + + P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 133/330 (40%), Gaps = 53/330 (16%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
+ K +G PN V Y LI YC+ G+ E A + + ++ K F + + A
Sbjct: 194 LIEKRWGRGCMPNIVFYNTLIDG------YCKKGDTERANVLFKELKMKGFLPTVKTYGA 247
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG----DMDSIKTKIPS- 219
+I G + + +L MS+ GL+ S Y ++ KHG D++ I S
Sbjct: 248 IINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSG 307
Query: 220 LKPQSELFLCFSFQLTNLLILVSS---DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
P + N+LI S ++ AE +L + GL P+ +YT L+ Y K
Sbjct: 308 CDPDMATY--------NILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCK 359
Query: 277 HGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
G+ LL + D Y +IH L V+G EV + N
Sbjct: 360 QGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAG------EVDVALTVRN------- 406
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSG- 392
M + G+ P A Y LM G K G + + + LLA+ V D I A V G
Sbjct: 407 --KMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAF--ITATLVDGF 462
Query: 393 --HGEYID-------EIISKIQPG-VGYSA 412
HG++ + I I PG VGY+A
Sbjct: 463 IRHGDFEEAKKLFELTIEKGIDPGVVGYNA 492
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 119/293 (40%), Gaps = 24/293 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D++ YN L+ L + +G+ PN+V+Y LI N YC+ G
Sbjct: 311 DMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHN------YCKQGEYL 364
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L M ++ + ALI+G A ++ A + M + G+ P A Y LM
Sbjct: 365 RALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLM 424
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQA 258
G K G + + K + + Q+ F +T L+ + D A+ + + +
Sbjct: 425 SGLCKKGRLPAAKVLLAEMLDQNVAPDAF---ITATLVDGFIRHGDFEEAKKLFELTIEK 481
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
G++P Y ++ GY K G M + L + D + ++ + G+ + D
Sbjct: 482 GIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPD--EFTYSTIIDGYIKMNDLH 539
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
A+ F +M + +P+ TYT L+ G+ GD++ + Q
Sbjct: 540 GALRMF----------GLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQ 582
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 99/474 (20%), Positives = 172/474 (36%), Gaps = 97/474 (20%)
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
+ S + L++ + G +E A K+ + M D+ + ++ G + + ++
Sbjct: 137 VFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIE 196
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
G P+ Y L+ GY K GD + LK +
Sbjct: 197 KRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMK-------------------- 236
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYL 300
G P+ +TY ++ G+ K G + V +LL ++ G + Y
Sbjct: 237 ---------------GFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYN 281
Query: 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+II A HG I+ + W M ++G +P TY L+ G G
Sbjct: 282 NIIDAQF--KHGCRIEAADTV--------GW-----MIKSGCDPDMATYNILITGSCSCG 326
Query: 361 DMDSIRRLLAQ---NGSSLVNGDYLDIIHALAVSGHGEY---IDEIISKIQPG-----VG 409
++ +LL Q G Y +IH GEY +D +I + G V
Sbjct: 327 EVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYC--KQGEYLRALDLLIKMSERGHKPDLVT 384
Query: 410 YSADAANHIYHLINKGQIDAAYRIVNTLARS-----ANI---------NGEQLPVGGFLV 455
Y+A I+ LI G++D A + N + ANI +LP L+
Sbjct: 385 YAA----LIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLL 440
Query: 456 RHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVN-TLARSAN--INGEQLPVGGFL 512
M+ N + A + I G + A ++ T+ + + + G + G+
Sbjct: 441 AEMLDQNVAPDAFI--TATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYC 498
Query: 513 VRHMVKTNQPIDKVLAVCHRLTDENLH-PRAFNLAVLIKAHVLKEDYTGAVETF 565
M+K D +L C + + LH P F + +I ++ D GA+ F
Sbjct: 499 KFGMMK-----DALL--CFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMF 545
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 87/222 (39%), Gaps = 33/222 (14%)
Query: 75 GELDVPL-------------DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
GE+DV L D + YN L+ + LA++ Q + P+
Sbjct: 396 GEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFI- 454
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV--FNALIYGHSQANDMASAE 179
+ L+ + + G+ E A K+ E +K I GV +NA+I G+ + M A
Sbjct: 455 -----TATLVDGFIRHGDFEEAKKLFELTIEKG--IDPGVVGYNAMIKGYCKFGMMKDAL 507
Query: 180 GILTMMSQAGLEPSAQTYTKLMCGYAK----HGDMDSIKTKIP-SLKPQSELFLCFSFQL 234
M Q P TY+ ++ GY K HG + + + KP ++ L
Sbjct: 508 LCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNV-----VTYTL 562
Query: 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
+S D+ AE M L+P+ TYT L+ + K
Sbjct: 563 LINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCK 604
>gi|356565780|ref|XP_003551115.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 622
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ +N + Y N T + ++ G++PN T + +IS YC++G +
Sbjct: 305 DVVSFNTVAISYAQNGKTVQVEAMILEMRRNGLKPNDRTC------TIIISGYCREGKVR 358
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + ++D + + N+L+ G D +L +M + + P TY+ +M
Sbjct: 359 EALRFVYRIKDLGLQPNLIILNSLVNGFVDTMDRDGVNEVLNLMEEFYIRPDVITYSTIM 418
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
+++ G ++ K ++ KP ++ + + + +M AE +LT+M+
Sbjct: 419 NAWSQAGFLEKCKEIYNNMLKSGVKPDGH-----AYSILAKGYVRAQEMEKAEELLTVMT 473
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
++G++P+ +T +M G+ G MD+ R+ + G
Sbjct: 474 KSGVQPNVVIFTTVMSGWCSVGRMDNAMRVFDKMG 508
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 140/329 (42%), Gaps = 41/329 (12%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G +P+ TY L+ N+ KY + I+ + +K FNAL+ ++
Sbjct: 160 GHQPSLATYTTLL-NALTTQKY-----FKPIHSIVSLVEEKQMKPDSRFFNALVNAFAEF 213
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD-SIK-----TKIPSLKPQSEL 226
++ A+ ++ M ++GL+PSA TY L+ GY G D SIK + ++KP
Sbjct: 214 GNIEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESIKLLDLMSIEGNVKP---- 269
Query: 227 FLCFSFQLTNLLILVSSDM---ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ + N+LI M + A ++ M+ +G++P ++ + YA++G V
Sbjct: 270 ----NLKTCNMLIRALCKMEHTSEAWNVVYKMTTSGMQPDVVSFNTVAISYAQNGKTVQV 325
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
++ + + + + D + +SG+ +V + FV + GL+
Sbjct: 326 EAMILEMRRNGLKPN--DRTCTIIISGYCRE-GKVREALRFVY---------RIKDLGLQ 373
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEI 400
P+ L+ G+ D D + +L + D Y I++A + +G E EI
Sbjct: 374 PNLIILNSLVNGFVDTMDRDGVNEVLNLMEEFYIRPDVITYSTIMNAWSQAGFLEKCKEI 433
Query: 401 ISKIQPGVGYSADAANHIYHLINKGQIDA 429
+ + G D H Y ++ KG + A
Sbjct: 434 YNNMLKS-GVKPDG--HAYSILAKGYVRA 459
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/329 (19%), Positives = 133/329 (40%), Gaps = 56/329 (17%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS----------NSKLI 131
D +NAL+ + + + + K++ G++P+ TY LI + KL+
Sbjct: 199 DSRFFNALVNAFAEFGNIEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESIKLL 258
Query: 132 SKYCQDGNIEGATKILEFM------------------RDKTFPISEGV--FNALIYGHSQ 171
+GN++ K + + T + V FN + ++Q
Sbjct: 259 DLMSIEGNVKPNLKTCNMLIRALCKMEHTSEAWNVVYKMTTSGMQPDVVSFNTVAISYAQ 318
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSELFL 228
E ++ M + GL+P+ +T T ++ GY + G + +I L Q L +
Sbjct: 319 NGKTVQVEAMILEMRRNGLKPNDRTCTIIISGYCREGKVREALRFVYRIKDLGLQPNLII 378
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
S L N + + D +L +M + + P TY+ +M +++ G ++ + +
Sbjct: 379 LNS--LVNGFV-DTMDRDGVNEVLNLMEEFYIRPDVITYSTIMNAWSQAGFLEKCKEIYN 435
Query: 289 QSGSSLVNGDYLDIIHALAVSGHG----EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
S V D HA ++ G + +++ ++ +M+++G++P
Sbjct: 436 NMLKSGVKPDG----HAYSILAKGYVRAQEMEKAEELLT------------VMTKSGVQP 479
Query: 345 SAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
+ +T +M G+ G MD+ R+ + G
Sbjct: 480 NVVIFTTVMSGWCSVGRMDNAMRVFDKMG 508
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N+L+ ++D + L +E I P+ +TY S +++ + Q G +E +I
Sbjct: 380 NSLVNGFVDTMDRDGVNEVLNLMEEFYIRPDVITY------STIMNAWSQAGFLEKCKEI 433
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
M ++ L G+ +A +M AE +LT+M+++G++P+ +T +M G+
Sbjct: 434 YNNMLKSGVKPDGHAYSILAKGYVRAQEMEKAEELLTVMTKSGVQPNVVIFTTVMSGWCS 493
Query: 207 HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA---SAEGILTMMSQAGLEPS 263
G MD+ + E + + + LI ++ AEG+L +M + ++P
Sbjct: 494 VGRMDN---AMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPK 550
Query: 264 AQT 266
T
Sbjct: 551 KST 553
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/138 (21%), Positives = 65/138 (47%), Gaps = 6/138 (4%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+ L + Y+ + + L + G++PN V + + ++S +C G ++ A +
Sbjct: 449 YSILAKGYVRAQEMEKAEELLTVMTKSGVQPNVVIF------TTVMSGWCSVGRMDNAMR 502
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + + F LI+G+++A AEG+L +M + ++P T + +
Sbjct: 503 VFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTILLVAEAWC 562
Query: 206 KHGDMDSIKTKIPSLKPQ 223
G + KT + ++K +
Sbjct: 563 FAGLKEGAKTLLITVKTE 580
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 123/320 (38%), Gaps = 59/320 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+R + E D ++ +G P VTY ++ + C+ G + A +
Sbjct: 280 YNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYS------LCRLGRVSDARR 333
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
L+ M ++ +N LIYG+S+ + A A + + + L PS TY L+ G
Sbjct: 334 YLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGC 393
Query: 206 KHGDMDSIK-------------------------TKIPSLKPQSELF----------LCF 230
+ G++D K ++ +L ELF C
Sbjct: 394 RTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCI 453
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
++ + L + + A G+ M G P TY L+ G K G+ D L+ +
Sbjct: 454 AYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKM 513
Query: 291 GSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
+ D Y IIHA +SG +EV + M + G+ PS
Sbjct: 514 RLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSD---------------MLKKGIHPSVV 558
Query: 348 TYTKLMCGYAKHGDMDSIRR 367
TYT L+ YA G +D ++
Sbjct: 559 TYTVLIHSYAVRGRLDFAKK 578
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 76/164 (46%), Gaps = 6/164 (3%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+++++G P+ +TY LI+ C+ GN + A ++++ MR + + ++I+
Sbjct: 477 EMKAEGFPPDLITYNVLING------LCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIH 530
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
H + + AE + + M + G+ PS TYT L+ YA G +D K ++ +
Sbjct: 531 AHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSP 590
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
++ + + M A + M G+ P+ TYT L+
Sbjct: 591 NVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILI 634
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 119/304 (39%), Gaps = 31/304 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ + N +L++ D + + + I P VT+ ++ + C++G +
Sbjct: 171 DVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSR------CKEGEVG 224
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L+ MR ++ +N L+ G S + A+ ++ MS GL+ SA TY L+
Sbjct: 225 RAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLI 284
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K + + + L ++ + ++ A L +M L
Sbjct: 285 RGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLM 344
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS-----------SLVNGDY----LDIIHAL 306
P +Y L+ GY++ G+ L ++ S +L++G LDI +
Sbjct: 345 PDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGM 404
Query: 307 A--VSGHGEYIDEVSAIVCFVNICFHWLEGPM-------MSQAGLEPSAQTYTKLMCGYA 357
+ HG D V+ + C PM M GL+P YT + G
Sbjct: 405 KDDMIKHGLCPDVVTFTILVRGFC-QMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGEL 463
Query: 358 KHGD 361
K G+
Sbjct: 464 KLGN 467
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ + + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +LL +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 129/305 (42%), Gaps = 43/305 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ L PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+++ R+ + + L + Y
Sbjct: 302 ------------MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAY 349
Query: 382 LDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
+I L G + + E++S ++P +G N KG + +++
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLLKE 406
Query: 437 LARSA 441
+ R
Sbjct: 407 MQRDG 411
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 120/299 (40%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + + P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 105/459 (22%), Positives = 169/459 (36%), Gaps = 87/459 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-------------- 127
D YNALL VY + L ++ES G PN VTY +L+S
Sbjct: 222 DRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMK 281
Query: 128 ---------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
+ L+S Y + G +E A +I MR + FNALI H +
Sbjct: 282 DSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKN 341
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELF 227
+ + I M G+EP T+ L+ + K+G + K +P F
Sbjct: 342 KNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATF 401
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTM---MSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
N+LI S++ L++ M QAG P T+ L+ A+ G +
Sbjct: 402 --------NILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAE 453
Query: 285 RLLAQ-SGSSLVNGD--YLDIIHALAVSGHGEYIDEV-----SAIVCFVNICFH-----W 331
+L + + SS D Y ++HA A G E + E+ + V F I +
Sbjct: 454 LILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVY 513
Query: 332 LEGPMMSQA----------GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDY 381
+ ++ +A G T+ ++ Y K G MD A S+ + D
Sbjct: 514 SKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDV 573
Query: 382 LDIIHALAVSGH-GEYID-EIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNT 436
+ + + G G Y E + G + D ++ I+ GQ+ +A RI +
Sbjct: 574 VTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHE 633
Query: 437 LARSA--------------NINGEQLPVGGFLVRHMVKT 461
+ + +NG P +V+HM KT
Sbjct: 634 MVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKT 672
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 159/398 (39%), Gaps = 57/398 (14%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG- 138
PLD+ Y +L+ N F +++ G +P+ VTY + +I Y + G
Sbjct: 114 PLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTY------NVIIDLYGKKGR 167
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ E ++ E M+ + E +N I + + A + T M + P TY
Sbjct: 168 SWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYN 227
Query: 199 KLMCGYAKHG----------DMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMAS 247
L+ Y K G +M+S +P++ +EL F L N A+
Sbjct: 228 ALLDVYGKAGWYNEAANVLKEMESAGC-LPNIVTYNELLSAFGRAGLCN---------AA 277
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE +M+S+ G+EP TYT L+ Y++ G ++ + Q +S + +
Sbjct: 278 AEMKDSMVSK-GIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIG 336
Query: 308 VSGHGEYIDEVSAI-----VCFVN---ICFHWLEGPM---------------MSQAGLEP 344
+ G + E+ I C V + ++ L G M +AG EP
Sbjct: 337 MHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEP 396
Query: 345 SAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEII 401
T+ L+ Y + G D SI + Q G + + ++ ALA G E+ + I+
Sbjct: 397 DKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELIL 456
Query: 402 SKIQPGVGYSADA--ANHIYHLINKGQIDAAYRIVNTL 437
++ D A+ ++ N G+++ +V+TL
Sbjct: 457 DELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTL 494
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/313 (19%), Positives = 117/313 (37%), Gaps = 36/313 (11%)
Query: 67 EDPFSVHTGELDVPL--DISHYNALLRVYLDNEHTFSPTDF-LAKLESQGIEPNRVTYQQ 123
+ S++ G L D++ +N LL L E + + L +L +PN + Y
Sbjct: 415 DQALSIYDGMLQAGCTPDLATFNTLLAA-LAREGRWEHAELILDELNRSSYKPNDIAY-- 471
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
+ ++ Y G +E ++++ + P ++ + + +S+ + + AE
Sbjct: 472 ----ASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFL 527
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT-----KIPSLKPQSELFLCFSFQLTNLL 238
M G T+ ++ Y K G MD + L+P + C L+
Sbjct: 528 AMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNC-------LM 580
Query: 239 ILVSSD--MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN 296
+ + E L AG P +Y ++ Y+KHG + S R+ + S+ +
Sbjct: 581 GMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQ 640
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY 356
D + +G E ++V M + G +P TY L+ Y
Sbjct: 641 PDSFTYNTFVGCYVNGGMFPEALSVV------------KHMHKTGCKPDEVTYRTLVDAY 688
Query: 357 AKHGDMDSIRRLL 369
K G + + R+L
Sbjct: 689 CKIGKFEEVERIL 701
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 99/255 (38%), Gaps = 59/255 (23%)
Query: 38 FLVLLVLLFVYLNSKWCSEPSLGPGNLPCEDPFSV--HTGELDVPLDISHYNALLRVYLD 95
F +L+ FV + SK CS ED F H G L D S +NA++ +Y
Sbjct: 501 FTKILLKTFVLVYSK-CSLVD------EAEDAFLAMRHHGYLS---DTSTFNAMISMYGK 550
Query: 96 NEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL-EFMRDKT 154
TD A L S G+EP+ VTY + L+ Y ++G L E M
Sbjct: 551 KGMMDKATDTFALLRSTGLEPDVVTY------NCLMGMYGREGMYRKCEATLRECMAAGQ 604
Query: 155 FP--ISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 212
P +S +N +I+ +S+ ++SA I M G++P + TY + Y G
Sbjct: 605 TPDLVS---YNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGG---- 657
Query: 213 IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
+ P+ A ++ M + G +P TY L+
Sbjct: 658 -------MFPE------------------------ALSVVKHMHKTGCKPDEVTYRTLVD 686
Query: 273 GYAKHGDMDSVRRLL 287
Y K G + V R+L
Sbjct: 687 AYCKIGKFEEVERIL 701
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 99/244 (40%), Gaps = 19/244 (7%)
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
++ + +++ + +R++ +P+ + +LI S+ A G M +AG +PS
Sbjct: 94 RESQLTTVSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLV 153
Query: 196 TYTKLMCGYAKHG-DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY ++ Y K G ++I +K Q +++ S A + T
Sbjct: 154 TYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQ 213
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVN-GDYLDIIHALAVSGH 311
M + P TY L+ Y K G + +L +S L N Y +++ A +G
Sbjct: 214 MKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGL 273
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
E ++ M+S+ G+EP TYT L+ Y++ G ++ + Q
Sbjct: 274 CNAAAE--------------MKDSMVSK-GIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQ 318
Query: 372 NGSS 375
+S
Sbjct: 319 MRTS 322
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 135/321 (42%), Gaps = 26/321 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I Y +LR D+ T + + L +ES+ + P I N L+S C++G ++
Sbjct: 71 NIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPT-----TFIVNM-LVSCLCKNGKVD 124
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + + D+ + +N L YG +A+ + A + M + + PS TY L+
Sbjct: 125 AAYELYKRLSDEC-SLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLL 183
Query: 202 CGYAKHGDMDSIKTKIPSL---KPQSELFL-CFSFQLTNLLILVSSDMASAEGILTMMSQ 257
GY + G M+ T + + K S++ +S+ + + +A +L M +
Sbjct: 184 YGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIK 243
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
+G P+ T+ L+ G G +D + N + + + + ++GH +
Sbjct: 244 SGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVER--NCEPTAVTYTVLITGHARALRI 301
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSIRRLLAQNGS 374
A FV+ M + G+EP+ TYT L +C K D I + ++ G
Sbjct: 302 DKANDYFVD----------MLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGR 351
Query: 375 SLVNGDYLDIIHALAVSGHGE 395
Y +I AL G E
Sbjct: 352 EPNVVTYTRVIGALCKGGQIE 372
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 85/216 (39%), Gaps = 41/216 (18%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
DV D+ YN ++ + + L ++ G PN VT+ L+ C
Sbjct: 210 DVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDG------LCLT 263
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G ++ A + E+M ++ + + LI GH++A + A M + G+EP+ TY
Sbjct: 264 GKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTY 323
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
T L+ G LC + ++ + L IL MS
Sbjct: 324 TALIGG------------------------LCDANKVEDAL-----------EILKRMSS 348
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293
G EP+ TYT+++ K G ++ +L + S
Sbjct: 349 TGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGS 384
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 146/366 (39%), Gaps = 68/366 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN ++ N+ D +++ +GI P+ VTY + LI +C G+++
Sbjct: 196 DVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTY------TTLIHGFCIMGHLK 249
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L M+ K + FN LI S+ M A+ +L +M +A ++P TY L+
Sbjct: 250 EAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLI 309
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY + ++ A+ + M+Q G+
Sbjct: 310 DGY-----------------------------------FLVDEVKHAKYVFYSMAQRGVT 334
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
P Q YT ++ G K +D L + + D Y +I L + H E
Sbjct: 335 PDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERA--- 391
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS----IRRLLAQNGS 374
+ +C M + G++P +YT L+ G K G ++ +RLLA+ G
Sbjct: 392 ------IALC------KRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAK-GY 438
Query: 375 SLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAY 431
L Y +I+ L +G + ++ SK++ G DA I L K + D A
Sbjct: 439 HLNVHAYTVLINRLCKAGFFDEALDLKSKMEDK-GCMPDAVTFDIIIRALFEKDENDKAE 497
Query: 432 RIVNTL 437
+I+ +
Sbjct: 498 KILREM 503
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 128/331 (38%), Gaps = 44/331 (13%)
Query: 85 HYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
H+N +L ++N+H + + E GI P+ T S LI+ +C +I A
Sbjct: 59 HFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTL------SILINCFCHQAHITLAF 112
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
+ + + F + N LI G ++ A + G + +Y L+ G
Sbjct: 113 SVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGL 172
Query: 205 AKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
K G+ ++ K + S+KP ++ L + + A + + M G
Sbjct: 173 CKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCK-----NKLLGDACDVYSEMIVKG 227
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYID 316
+ P TYT L+ G+ G + LL + +N + +I AL+ G +
Sbjct: 228 ISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAK 287
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY-----AKHGDMDSIRRLLAQ 371
+ A+ M +A ++P TY L+ GY KH + +AQ
Sbjct: 288 ILLAV---------------MMKACIKPDVFTYNSLIDGYFLVDEVKHAKY--VFYSMAQ 330
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEIIS 402
G + Y ++I+ L + + +DE +S
Sbjct: 331 RGVTPDVQCYTNMINGLCKT---KMVDEAMS 358
>gi|297737955|emb|CBI27156.3| unnamed protein product [Vitis vinifera]
Length = 625
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 141/353 (39%), Gaps = 50/353 (14%)
Query: 82 DISHYNALLRVYLDNE-HTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ YN L+ Y + + + +L LE++ + P TY + L+ YC G +
Sbjct: 205 DVICYNLLIDAYGQKSLYKKAESTYLELLEARCV-PTEDTY------ALLLKAYCTSGLL 257
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A + MR FP S V+NA I G + D A I M + +PS TYT L
Sbjct: 258 EKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTML 317
Query: 201 MCGYAKHG----------DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
+ Y K +M S K K P++ + L F+ + AE
Sbjct: 318 INLYGKASKSYMALKVFHEMRSQKCK-PNICTFTALVNAFARE---------GLCEKAEE 367
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
I + +AGLEP Y LM Y++ G + L+ G Y ++ A
Sbjct: 368 IFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 427
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
+G E V + M + G+ P+ +++ L+ Y++ G +
Sbjct: 428 RAGLHEDAQAVFEV---------------MKRLGITPTMKSHMLLLSAYSRAGKVAKCEE 472
Query: 368 LLAQNGSSLVNGDYL---DIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH 417
++ Q S + D +++ G E ++E+++ ++ G Y AD + +
Sbjct: 473 IVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKG-PYPADISTY 524
>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 932
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 18/232 (7%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I + + G + A +I + MR + +NALI G + M A IL M+ AG
Sbjct: 570 IIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAG 629
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+ P+ TYT LM GYA GD + L+ + ++++ S M SA
Sbjct: 630 VGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSAL 689
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
+ MS + + Y L+ G+A+ GD+ L+ Q + D Y I+A
Sbjct: 690 AVTKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINAC 749
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+G + E+ M +G++P+ +TYT L+ G+A+
Sbjct: 750 CKAGDMQKATEIIQ---------------EMEASGIKPNLKTYTTLINGWAR 786
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 121/288 (42%), Gaps = 29/288 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y++L+ Y + K++ +GIE VTY S ++ + + GN + A
Sbjct: 322 YSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTY------SIIVGGFAKMGNADAADH 375
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
E ++K ++ ++ +IY H Q +M AE ++ M + G++ Y +M GY
Sbjct: 376 WFEEAKEKLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYT 435
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
G+ + LK S+ L NL V ++ A I MM +G++ +
Sbjct: 436 MIGNEEKCLIVFDRLKECGFFPSVISYGCLINLYTKVGK-VSKALEISKMMKMSGIKHNM 494
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAI 321
+TY+ L+ G+ K D + + + D Y +II A G+ +
Sbjct: 495 KTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGN------MDRA 548
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+C V M + P+ +T+ ++ G+A+ G+M RR L
Sbjct: 549 ICMVR---------QMQKERHRPTTRTFLPIIHGFARAGEM---RRAL 584
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 140/367 (38%), Gaps = 70/367 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y+ L+ +L + + G++P+ V Y + +I+ +C GN++
Sbjct: 493 NMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLY------NNIITAFCGMGNMD 546
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ M+ + + F +I+G ++A +M A I MM ++G P+ TY L+
Sbjct: 547 RAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALI 606
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G ++ M A IL M+ AG+
Sbjct: 607 LG-----------------------------------LVEKRQMTKAVAILDEMNVAGVG 631
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRR---LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P+ TYT LM GYA GD + + +L G + Y ++ + SG + V
Sbjct: 632 PNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAV 691
Query: 319 SAIVCFVNICFH-----------------WLEGPMMSQ---AGLEPSAQTYTKLMCGYAK 358
+ + NI + W +M Q GL P TYT + K
Sbjct: 692 TKEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCK 751
Query: 359 HGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA 415
GDM ++ + +S + + Y +I+ A + E +++ G+ D A
Sbjct: 752 AGDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLA-GFKPDKA 810
Query: 416 NHIYHLI 422
+YH +
Sbjct: 811 --VYHCL 815
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 125/310 (40%), Gaps = 42/310 (13%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++ Y + G++ A + E MR + S V+++LI+ ++ DM A + M + G
Sbjct: 290 MVKYYGRRGDMHHARQTFESMRARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEG 349
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS-------IKTKIPSLKPQSELFLCFSF-QLTNLLILV 241
+E + TY+ ++ G+AK G+ D+ K K+PSL + ++ Q+ N
Sbjct: 350 IEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYGGIIYAHCQICN----- 404
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSG------- 291
M AE ++ M + G++ Y +M GY G+ + V L + G
Sbjct: 405 ---MDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFFPSVIS 461
Query: 292 -SSLVN--------GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG----PMMS 338
L+N L+I + +SG + S ++ W +
Sbjct: 462 YGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFT 521
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE 395
+ GL+P Y ++ + G+MD + R + + +L IIH A +G
Sbjct: 522 KDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIHGFARAGEMR 581
Query: 396 YIDEIISKIQ 405
EI ++
Sbjct: 582 RALEIFDMMR 591
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
++P + YN L+ + + D + ++ +G+ P+ TY + I+ C+
Sbjct: 699 NIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTY------TSFINACCKA 752
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G+++ AT+I++ M + + LI G ++A+ A M AG +P Y
Sbjct: 753 GDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVY 812
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 129/321 (40%), Gaps = 45/321 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y A++ FL ++ ++ + PN VTY + LI C+ G ++
Sbjct: 45 DVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTY------TVLIDGLCKGGRVD 98
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L MR K P + +N+LI G +A + A +L M +G P TYT L+
Sbjct: 99 EAVALLSKMRKKCVPTAV-TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLI 157
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
G+ K D L +P + C L + A + M
Sbjct: 158 TGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCK-----EGRLKEAIDLFGRMI 212
Query: 257 QAG-LEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSS--------LVNG------- 297
++G P+ TY L+ G+ + G MD LL A++GSS L+NG
Sbjct: 213 KSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARL 272
Query: 298 -DYLDIIHALAVSGHGEYIDEVSAI---VCFVNI---CFHWLEGPMMSQAGLEPSAQTYT 350
D D+++ + G + +++ +C N H L M + P+ TY
Sbjct: 273 DDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHIL--GEMRRKSCSPTVYTYN 330
Query: 351 KLMCGYAKHGDMDSIRRLLAQ 371
++ GY + ++ R+ + +
Sbjct: 331 TILDGYCRANQLEEARKFMLE 351
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 126/335 (37%), Gaps = 32/335 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKL-ESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ Y+ L+ D ++ +S PN VTY LIS +C+ G +
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISG------FCRMGKM 237
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A +LE M + + L+ G + + A +L M++ GL P T+T L
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS--AEGILTMMSQA 258
M G + + + ++ +S C T IL A+ E M+ +
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKS----CSPTVYTYNTILDGYCRANQLEEARKFMLEEM 353
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
P+ ++ ++ G K L+ ++ N D Y +I L + +
Sbjct: 354 DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLC---REKKV 410
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
DE + M+ + G P++ TY+ L+ G G +D R + + G
Sbjct: 411 DEACRVY-----------RKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYI-EKGCV 458
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISK-IQPGVG 409
G Y +I A + E E++ +Q G G
Sbjct: 459 PNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFG 493
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 132/307 (42%), Gaps = 43/307 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL P+A ++ LM GY + GD+D
Sbjct: 132 YPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMDYANELFNEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+++ R+ + + L + Y
Sbjct: 302 ------------MSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 382 LDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
+I L G + + E++S ++P +G N KG + +++
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLMKE 406
Query: 437 LARSANI 443
+ R +
Sbjct: 407 MQRDGYV 413
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ + + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +L+ +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLMKE 406
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 125/300 (41%), Gaps = 26/300 (8%)
Query: 76 ELDVPLDISHYNALL-RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
E P + +N L+ R + E + + F A + G+ P V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIKLAQSVFDA-ITKWGLRPTAVSFNTLMNG------Y 181
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 182 IRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNG 241
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE 301
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGH 311
MS GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 302 MSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGR 361
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +L+ +
Sbjct: 362 S--VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKE 406
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 127/299 (42%), Gaps = 39/299 (13%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD--- 211
+P S FN L + + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 138 YPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 197
Query: 212 SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 198 KLKSAMHASGVXPDVYT-YSVLINGL--CKESKMDXANELFDEMLVKGLVPNGVTFTTLI 254
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I+ L G + IDE
Sbjct: 255 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDE------- 307
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+D+ R+ + Q L + Y
Sbjct: 308 ------------MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 355
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
+I L G ++++ ++ VG D + I + KG + +++ +
Sbjct: 356 TALISGLCQEGRSVDAEKMMREMLS-VGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEM 413
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 211 DVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTF------TTLIDGHCKNGRVD 264
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLI 324
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE ++ M GL+
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLK 384
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ K GD+ +LL +
Sbjct: 385 PDTGTYTMIINEVCKKGDVGKGSKLLKE 412
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 116/299 (38%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L + + G+ P+ V+Y L++ Y
Sbjct: 135 ECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNG------YI 188
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ K+ M ++ LI G + + M A + M GL P+
Sbjct: 189 RLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGV 248
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS L ++ + D+ A ++ M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEM 308
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+D+ R+ + Q L + Y +I L G
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 368
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ K GD+ +LL +
Sbjct: 369 --VDAEKMM-------------REMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKE 412
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 135/325 (41%), Gaps = 41/325 (12%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L L + G+ P RV Y LI+ YCQ G +EGA M+ + +N
Sbjct: 361 EVLQSLVNAGLVPTRVIYNTLING------YCQTGELEGAFSTFGQMKSRHIKPDHITYN 414
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
ALI G +A + +A+ +L M G+ P+ +T+ L+ Y + G ++ + ++
Sbjct: 415 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 474
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
S+ + + A IL M + P+AQ Y ++ Y +HG D
Sbjct: 475 GLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQA 534
Query: 284 RRLLAQSGS-----SLVNGDYL--------------DIIHALAVSGHGEYIDEVSAIVCF 324
L+ + S S+V + L +II++L S H D VS
Sbjct: 535 FILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL--SNHRLIPDAVSYNTLI 592
Query: 325 VNICFHW-LEGPM-----MSQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSS 375
C+ ++ + M + G++ + +TY +L+ G G +M+ + + + QN
Sbjct: 593 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVV 652
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEI 400
N IH + V + +Y +EI
Sbjct: 653 PSNA-----IHNIMVEAYSKYGNEI 672
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 53/239 (22%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S L++ C+DG + A ++L+ + + + ++N LI G+ Q ++ A M
Sbjct: 344 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 403
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
++P TY L+ G LC + ++TN
Sbjct: 404 RHIKPDHITYNALING------------------------LCKAERITN----------- 428
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIH 304
A+ +L M G+ P+ +T+ L+ Y + G ++ +L++ + + + Y I++
Sbjct: 429 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 488
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
A +G ++ V ++ FH + P+AQ Y ++ Y +HG D
Sbjct: 489 AFCKNG------KIPEAVAILDDMFH---------KDVLPNAQVYNAIIDAYVEHGPND 532
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 120/283 (42%), Gaps = 35/283 (12%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFM-RDKTFPISEGVFNALIY 167
L S G P+ + +K + G++ A +L M RD P + +N +I
Sbjct: 155 LASAGARPDTFAW------NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIA 208
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKI--PSLKP 222
G +A A + M++ + P+ TY ++ G+ K GD+++ ++ ++ LKP
Sbjct: 209 GMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKP 268
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+ + ++ L+ L + M +L M+ + P TY+ L G +++GD +
Sbjct: 269 NA---ITYNVLLSGL--CRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 323
Query: 283 VRRLLAQSGSSLVN-GDYLD--IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+ L + + V GDY +++ L G +EV + VN
Sbjct: 324 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV--LQSLVN------------- 368
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL 382
AGL P+ Y L+ GY + G+++ Q S + D++
Sbjct: 369 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 411
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 60/315 (19%), Positives = 119/315 (37%), Gaps = 56/315 (17%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
PN +Y +I+ + G A ++ + M ++ + +N +I GH + D+
Sbjct: 198 PNAFSYNVVIAG------MWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDL 251
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL- 234
+ + M GL+P+A TY L+ G + G M + + Q + F++ +
Sbjct: 252 EAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSIL 311
Query: 235 --------------------------------TNLLILVSSD--MASAEGILTMMSQAGL 260
+ LL + D ++ AE +L + AGL
Sbjct: 312 FDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGL 371
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
P+ Y L+ GY + G+++ Q S + D++ + E I
Sbjct: 372 VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 431
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSSLV 377
++ +E M G+ P+ +T+ L+ Y + G ++ +L+ +NG
Sbjct: 432 LL---------ME---MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 479
Query: 378 NGDYLDIIHALAVSG 392
Y I++A +G
Sbjct: 480 VVSYGSIVNAFCKNG 494
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
DV + YNA++ Y+++ + K++S GI P+ VTY LI C
Sbjct: 510 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG------LCNQ 563
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
I A +I+ + + +N LI ++ A + M + G++ + +TY
Sbjct: 564 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 623
Query: 198 TKLMCGYAKHGDMDSIK 214
+L+ G G ++ ++
Sbjct: 624 HQLISGLGGAGRLNEME 640
>gi|356502612|ref|XP_003520112.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
chloroplastic-like [Glycine max]
Length = 697
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 124/321 (38%), Gaps = 64/321 (19%)
Query: 67 EDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTD---FLAKLESQGIEPNRVTYQQ 123
ED + V+ + H + V + E S D F K+ +G+ R + +
Sbjct: 266 EDAWKVYESMETENIHPDHMTCSIMVTVMRELGHSAKDAWQFFEKMNRKGV---RWSEEV 322
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
L LI+ +C +G A I M K S V+N L+ ++N + +AEG+
Sbjct: 323 L---GALINSFCVEGLRRQALIIQSEMEKKGVSSSAIVYNTLMDAFCKSNHIEAAEGLFV 379
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
M G++P A TY LM Y++ ++ KI
Sbjct: 380 EMKAKGIKPIAATYNILMHAYSRR-----MQPKI-------------------------- 408
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL-----LAQSGSSLVNGD 298
E +L M GL+P+A +YT L+ Y K +M + + + G +
Sbjct: 409 ----VEKLLEEMQDVGLKPNATSYTCLIIAYGKQKNMSDMAAADAFLKMKKVGVKPTSQS 464
Query: 299 YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
Y +IHA +VSG E A F N M G++PS +TYT L+ +
Sbjct: 465 YTALIHAYSVSGLHE-----KAYAAFEN----------MQNEGIKPSIETYTTLLNAFRH 509
Query: 359 HGDMDSIRRLLAQNGSSLVNG 379
GD ++ + S V G
Sbjct: 510 AGDAQTLMEIWKLMISEKVEG 530
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 32/273 (11%)
Query: 107 AKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
+++E +G+ + + Y + L+ +C+ +IE A + M+ K +N L+
Sbjct: 344 SEMEKKGVSSSAIVY------NTLMDAFCKSNHIEAAEGLFVEMKAKGIKPIAATYNILM 397
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-------IKTKIPS 219
+ +S+ E +L M GL+P+A +YT L+ Y K +M +K K
Sbjct: 398 HAYSRRMQPKIVEKLLEEMQDVGLKPNATSYTCLIIAYGKQKNMSDMAAADAFLKMKKVG 457
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
+KP S+ + + VS A M G++PS +TYT L+ + GD
Sbjct: 458 VKPTSQSYTALIHAYS-----VSGLHEKAYAAFENMQNEGIKPSIETYTTLLNAFRHAGD 512
Query: 280 MDSVRRLLAQSGSSLVNGDYLDI-IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
++ + S V G I + G +++ I F
Sbjct: 513 AQTLMEIWKLMISEKVEGTGATFNILVDGFAKQGLFMEAREVISEF-------------G 559
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ GL+P+ TY L+ YA+ G + +LL +
Sbjct: 560 KVGLKPTVVTYNMLINAYARGGQHSKLPQLLKE 592
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 129/321 (40%), Gaps = 45/321 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y A++ FL ++ ++ + PN VTY + LI C+ G ++
Sbjct: 45 DVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTY------TVLIDGLCKGGRVD 98
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L MR K P + +N+LI G +A + A +L M +G P TYT L+
Sbjct: 99 EAVALLSKMRKKCVPTAV-TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLI 157
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
G+ K D L +P + C L + A + M
Sbjct: 158 TGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCK-----EGRLKEAIDLFGRMI 212
Query: 257 QAG-LEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSS--------LVNG------- 297
++G P+ TY L+ G+ + G MD LL A++GSS L+NG
Sbjct: 213 KSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARL 272
Query: 298 -DYLDIIHALAVSGHGEYIDEVSAI---VCFVNI---CFHWLEGPMMSQAGLEPSAQTYT 350
D D+++ + G + +++ +C N H L M + P+ TY
Sbjct: 273 DDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHIL--GEMRRKSCSPTVYTYN 330
Query: 351 KLMCGYAKHGDMDSIRRLLAQ 371
++ GY + ++ R+ + +
Sbjct: 331 TILDGYCRANQLEEARKFMLE 351
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 126/335 (37%), Gaps = 32/335 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKL-ESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ Y+ L+ D ++ +S PN VTY LIS +C+ G +
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISG------FCRMGKM 237
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A +LE M + + L+ G + + A +L M++ GL P T+T L
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS--AEGILTMMSQA 258
M G + + + ++ +S C T IL A+ E M+ +
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKS----CSPTVYTYNTILDGYCRANQLEEARKFMLEEM 353
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
P+ ++ ++ G K L+ ++ N D Y +I L + +
Sbjct: 354 DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLC---REKKV 410
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
DE + M+ + G P++ TY+ L+ G G +D R + + G
Sbjct: 411 DEACRVY-----------RKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYI-EKGCV 458
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISK-IQPGVG 409
G Y +I A + E E++ +Q G G
Sbjct: 459 PNIGTYNLLIDAFRKANRDEDARELLDDMVQRGFG 493
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 135/321 (42%), Gaps = 26/321 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I Y +LR D+ T + + L +ES+ + P I N L+S C++G ++
Sbjct: 71 NIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPT-----TFIVNM-LVSCLCKNGKVD 124
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + + D+ + +N L YG +A+ + A + M + + PS TY L+
Sbjct: 125 AAYELYKRLSDEC-SLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLL 183
Query: 202 CGYAKHGDMDSIKTKIPSL---KPQSELFL-CFSFQLTNLLILVSSDMASAEGILTMMSQ 257
GY + G M+ T + + K S++ +S+ + + +A +L M +
Sbjct: 184 YGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIK 243
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
+G P+ T+ L+ G G +D + N + + + + ++GH +
Sbjct: 244 SGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVER--NCEPTAVTYTVLITGHARALRI 301
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSIRRLLAQNGS 374
A FV+ M + G+EP+ TYT L +C K D I + ++ G
Sbjct: 302 DKANDYFVD----------MLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGR 351
Query: 375 SLVNGDYLDIIHALAVSGHGE 395
Y +I AL G E
Sbjct: 352 EPNVVTYTRVIGALCKGGQIE 372
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 85/216 (39%), Gaps = 41/216 (18%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
DV D+ YN ++ + + L ++ G PN VT+ L+ C
Sbjct: 210 DVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDG------LCLT 263
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G ++ A + E+M ++ + + LI GH++A + A M + G+EP+ TY
Sbjct: 264 GKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTY 323
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
T L+ G LC + ++ + L IL MS
Sbjct: 324 TALIGG------------------------LCDANKVEDAL-----------EILKRMSS 348
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293
G EP+ TYT+++ K G ++ +L + S
Sbjct: 349 TGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGS 384
>gi|225423724|ref|XP_002276864.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Vitis vinifera]
Length = 587
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 141/353 (39%), Gaps = 50/353 (14%)
Query: 82 DISHYNALLRVYLDNE-HTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ YN L+ Y + + + +L LE++ + P TY + L+ YC G +
Sbjct: 167 DVICYNLLIDAYGQKSLYKKAESTYLELLEARCV-PTEDTY------ALLLKAYCTSGLL 219
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A + MR FP S V+NA I G + D A I M + +PS TYT L
Sbjct: 220 EKAEAVFAEMRKYGFPPSAVVYNAYIDGLMKGGDTQKAVEIFERMKRDRCQPSTATYTML 279
Query: 201 MCGYAKHG----------DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
+ Y K +M S K K P++ + L F+ + AE
Sbjct: 280 INLYGKASKSYMALKVFHEMRSQKCK-PNICTFTALVNAFARE---------GLCEKAEE 329
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
I + +AGLEP Y LM Y++ G + L+ G Y ++ A
Sbjct: 330 IFEQLQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 389
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
+G E V + M + G+ P+ +++ L+ Y++ G +
Sbjct: 390 RAGLHEDAQAVFEV---------------MKRLGITPTMKSHMLLLSAYSRAGKVAKCEE 434
Query: 368 LLAQNGSSLVNGDYL---DIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH 417
++ Q S + D +++ G E ++E+++ ++ G Y AD + +
Sbjct: 435 IVNQMHKSGIKPDTFVLNSMLNLYGRLGQFEKMEEVLTAMEKG-PYPADISTY 486
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ +N + Y N T + +++ ++PN T + +IS YC++G ++
Sbjct: 247 DVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTC------TIIISGYCREGKVQ 300
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M+D + V N+L+ G D + +L +M + + P TY+ +M
Sbjct: 301 EALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIM 360
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
+++ G ++ K ++ KP + ++ + + + +M AE +LT+M+
Sbjct: 361 NAWSQAGFLEKCKEIYNNMLKSGVKPDAH-----AYSILAKGYVRAQEMEKAEEMLTVMT 415
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
++G+ P+ +T ++ G+ G MD+ R+ + G
Sbjct: 416 KSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMG 450
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 138/331 (41%), Gaps = 45/331 (13%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G +P+ TY L+ N+ KY + I+ + +K FNALI +++
Sbjct: 102 GHQPSLATYTTLL-NALTTQKY-----FKPIHSIVSLVEEKQMKPDSIFFNALINAFAES 155
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS------IKTKIPSLKPQSEL 226
+M A+ ++ M ++GL+PSA TY L+ GY G D + + ++KP +
Sbjct: 156 GNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKT 215
Query: 227 FLCFSFQLTNLLILVSSDM---ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ N+LI M + A ++ M+ +G++P T+ + YA++G
Sbjct: 216 Y--------NMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQA 267
Query: 284 RRLL--AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
++ Q S N II +SG+ +V + FV M G
Sbjct: 268 EAMILEMQRNSLKPNERTCTII----ISGYCRE-GKVQEALRFVY---------RMKDLG 313
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYID 398
++P+ L+ G+ D D + +L + D Y I++A + +G E
Sbjct: 314 MQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCK 373
Query: 399 EIISKIQPGVGYSADAANHIYHLINKGQIDA 429
EI + + G DA H Y ++ KG + A
Sbjct: 374 EIYNNMLKS-GVKPDA--HAYSILAKGYVRA 401
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/335 (18%), Positives = 135/335 (40%), Gaps = 56/335 (16%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-------- 127
E + D +NAL+ + ++ + + K++ G++P+ TY LI
Sbjct: 135 EKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPD 194
Query: 128 ----------------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
+ LI C+ NI A ++ M FN +
Sbjct: 195 ESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTI 254
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
++Q A AE ++ M + L+P+ +T T ++ GY + G + + +K +
Sbjct: 255 ATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMK---D 311
Query: 226 LFLCFSFQLTNLLILVSSDMASAEG---ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
L + + + N L+ DM +G +L +M + + P TY+ +M +++ G ++
Sbjct: 312 LGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEK 371
Query: 283 VRRLLAQSGSSLVNGDYLDIIHALAVSGHG----EYIDEVSAIVCFVNICFHWLEGPMMS 338
+ + S V D HA ++ G + +++ ++ +M+
Sbjct: 372 CKEIYNNMLKSGVKPD----AHAYSILAKGYVRAQEMEKAEEMLT------------VMT 415
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
++G+ P+ +T ++ G+ G MD+ R+ + G
Sbjct: 416 KSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMG 450
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 93/213 (43%), Gaps = 12/213 (5%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N+L+ ++D + L +E I P+ +TY S +++ + Q G +E +I
Sbjct: 322 NSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITY------STIMNAWSQAGFLEKCKEI 375
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
M ++ L G+ +A +M AE +LT+M+++G+ P+ +T ++ G+
Sbjct: 376 YNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCS 435
Query: 207 HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA---SAEGILTMMSQAGLEPS 263
G MD+ + E + + + LI ++ AEG+L +M + ++P
Sbjct: 436 VGRMDNA---MRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPK 492
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN 296
T + + G + + LL + + N
Sbjct: 493 KSTILLVAEAWRFAGFKERAKTLLRTVKAKMAN 525
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 47/307 (15%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKSVMQASGVQPDVY-TYSVLINGL--CKESKMDDANALFDEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSV----RRLLAQS-GSSLVNGDYLDIIHALAVSGH----GEYIDEVSAIV 322
G+ K+G +D R++L+QS L+ Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYRQMLSQSLLPDLIT--YNTLIYGLCKKGDLKQAQDLIDE----- 301
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNG 379
MS GL+P TYT L+ G K GD+++ R+ + + L +
Sbjct: 302 --------------MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDV 347
Query: 380 DYLDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIV 434
Y +I L G + + E++S ++P +G N KG + +++
Sbjct: 348 AYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLL 404
Query: 435 NTLARSA 441
+ R
Sbjct: 405 KEMQRDG 411
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 12/211 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ ++ G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I M ++ +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS--AEGILTMMSQA 258
G K GD+++ + + +K L T L+ + + S AE +L M
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRL---DDVAYTALISXLCQEGRSVDAEKMLREMLSV 375
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
GL+P TYT ++ + K GD+ + +LL +
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 121/299 (40%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS L ++ + D+ A+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|255660934|gb|ACU25636.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 484
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I Y+AL +V L + K+ S+GIEP R T+ +I L C
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFL----C 163
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + + AE M +EP+
Sbjct: 164 --GKVETANRFFEDMKXREISPDVITYNTMINGYYRVKKIEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D T + + KP + + L N + M+ A G
Sbjct: 222 TYTTLIKGYVSVDRVDDALTLLEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEASG 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M + P + + +L+ G K G++D+ +L
Sbjct: 277 ILKEMVDKYIAPKDNSIFLRLISGQCKAGNLDAAADVL 314
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L++ Y+ + L +++ GI+PN +TY S L+ C + A+
Sbjct: 223 YTTLIKGYVSVDRVDDALTLLEEMKGFGIKPNAITY------STLLPGLCNAEKMSEASG 276
Query: 146 ILEFMRDKTF-PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
IL+ M DK P +F LI G +A ++ +A +L M + + A Y L+ Y
Sbjct: 277 ILKEMVDKYIAPKDNSIFLRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENY 336
Query: 205 AKHGD-------MDSIKTKIPSLKPQSELFLCFS-FQLTNLLILVSSDMASAEGILTMMS 256
K GD +D + K L+PQS L + S + + + A AE ++ +
Sbjct: 337 CKAGDYEKAIKLLDKLIEKDIVLRPQSSLHMEPSAYNPLVEYLCNNGQTAKAETLVRQLM 396
Query: 257 QAGLE-PSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ G++ P+A L+ G+++ G DS LL
Sbjct: 397 KLGVQDPTA--LNTLIRGHSQEGSPDSAFELL 426
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 152/355 (42%), Gaps = 55/355 (15%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K++ G+ PN TY +++ + C+DG + A K+ + MR++ + +N LI
Sbjct: 258 KMQEHGVFPNLYTYNCVMN------QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G + A ++ M + P+ TY L+ G+ G + + LK +
Sbjct: 312 GLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRG--- 368
Query: 228 LCFSFQLTNLLILVS-----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
S L +LVS D + A ++ M + G++PS TYT L+ +A+ +M++
Sbjct: 369 --LSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMET 426
Query: 283 ---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+R + + G Y +IH + G ++E S + M +
Sbjct: 427 AIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQ---MNEASRLF------------KSMVE 471
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRL--------LAQNGSSLVNGDYLDIIHALAVS 391
LEP+ Y ++ GY K G RL LA N +S Y +I L
Sbjct: 472 KMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVAS-----YSYLIRVLCKE 526
Query: 392 GHGEYIDEIISK-IQPGVGYSADAANHIYHLINKGQIDA-AYRIVNTLARSANIN 444
+ ++++ K I G+ D ++ I +LI++ + D+ +I++ A S N+N
Sbjct: 527 RKLKEAEDLVEKMIDSGI----DPSDTICNLISRAKTDSPVAQIID--ASSFNLN 575
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 93/226 (41%), Gaps = 14/226 (6%)
Query: 67 EDPFSV--HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL 124
+D F V E V +I YN L+ + +++S I PN +TY L
Sbjct: 285 KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTL 344
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
I +C G + A + ++ + S +N L+ G + D + A ++
Sbjct: 345 IDG------FCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKE 398
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LV 241
M + G++PS TYT L+ +A+ D+++T I EL L ++LI +
Sbjct: 399 MEERGIKPSKVTYTILIDTFARS---DNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
M A + M + LEP+ Y ++ GY K G RL
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLF 501
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 128/320 (40%), Gaps = 29/320 (9%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I C+ G IE + +L +R+ F + ++ LI G + ++ A+ + M + G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS-----IKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
L + TYT L+ G K+G K + + P + C QL
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCK-----DGR 283
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
A + M + G+ + TY L+ G + + +++ Q S ++N + I +
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNL--ITY 341
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
+ G V + +++C + GL PS TY L+ G+ + GD
Sbjct: 342 NTLIDGFC----SVGKLGKALSLCRD------LKSRGLSPSLVTYNVLVSGFCRKGDTSG 391
Query: 365 IRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---I 418
++ + + G Y +I A S + E ++ S ++ +G D + I
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEE-LGLVPDVHTYSVLI 450
Query: 419 YHLINKGQIDAAYRIVNTLA 438
+ KGQ++ A R+ ++
Sbjct: 451 HGFCIKGQMNEASRLFKSMV 470
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 120/330 (36%), Gaps = 39/330 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
++ V LD+ + +++ + D L +L G PN V Y LI C
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGC------C 209
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G IE A + M +E + LI+G + + M + G+ P+
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLY 269
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG--ILT 253
TY +M K G ++ + C L+ + +M + E ++
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERG--VSCNIVTYNTLIGGLCREMKANEANKVMD 327
Query: 254 MMSQAGLEPSAQTYTKLM---CGYAKHGDMDSVRRLLAQSG--SSLVNGDYL--DIIHAL 306
M + P+ TY L+ C K G S+ R L G SLV + L
Sbjct: 328 QMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKG 387
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 364
SG + + E M + G++PS TYT L+ +A+ +M++
Sbjct: 388 DTSGAAKMVKE-------------------MEERGIKPSKVTYTILIDTFARSDNMETAI 428
Query: 365 -IRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
+R + + G Y +IH + G
Sbjct: 429 QLRSSMEELGLVPDVHTYSVLIHGFCIKGQ 458
>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1385
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 135/333 (40%), Gaps = 32/333 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +L+ L H+ + + ++G++P+ + + L+ +Y + G +
Sbjct: 657 YTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLD------RYSRKGKMSKVND 710
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
IL MR ++ + +N L++G+S+ + MA + M G P T+ L+ GY
Sbjct: 711 ILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYC 770
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G +D + + + CF+ + + +++ A ++ ++ G+ P+
Sbjct: 771 KSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVD 830
Query: 266 TYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALA----VSGHGEYIDE- 317
TY L G+ + D R + L ++G + + +I + V G E DE
Sbjct: 831 TYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEM 890
Query: 318 -----------VSAIVCFVNICFHWLEGP----MMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+SAI+ + E +M + + P+ T+T LM Y K G++
Sbjct: 891 KILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNV 950
Query: 363 DS---IRRLLAQNGSSLVNGDYLDIIHALAVSG 392
+R ++ Q L Y +I L G
Sbjct: 951 AKALELRSVMEQCHVKLDVAAYNVLISGLCADG 983
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 124/297 (41%), Gaps = 31/297 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+++ +N LL + S L K++ G P VTY L++ YC+ G +
Sbjct: 178 NVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLN------WYCKKGRYK 231
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A+++++ M K +N LI + + A IL M + + P+ TY L+
Sbjct: 232 AASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLI 291
Query: 202 CGYAKHGDMDSIKTKI------PSLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGIL 252
G K G + + TK+ +L P S + N LI + ++ A +
Sbjct: 292 NGLVKEGKI-GVATKVFEEMSLCNLLPNSVTY--------NTLIFGHCSNGNIEEALRLC 342
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKH---GDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+M GL P+ TY L+ G +KH G + SV + G + + Y +I L +
Sbjct: 343 DVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKN 402
Query: 310 GHGE----YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
G E +D++ + +I + + GL P+ ++ L+ Y K G++
Sbjct: 403 GLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNL 459
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 107/282 (37%), Gaps = 46/282 (16%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + T ++ + PN VTY LI +C +GNIE A +
Sbjct: 287 YNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFG------HCSNGNIEEALR 340
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M +E + AL+ G S+ +L M G+ +YT ++ G
Sbjct: 341 LCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLC 400
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTN--LLILVSSDMASAEGILTMMSQAGLEPS 263
K+G ++ + QL + L + VS D+ + ++ + GL P+
Sbjct: 401 KNGLLEE------------------AVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPN 442
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVC 323
++ L+ Y K G++ + L+ + SGH S +V
Sbjct: 443 RVLHSTLIYNYCKMGNLK----------------EALNAYAVMNQSGHVSDHFTSSVLVA 486
Query: 324 FVNICFHWLEGPM----MSQAGLEPSAQTYTKLMCGYAKHGD 361
C E MS+ GL PS+ T+ ++ Y GD
Sbjct: 487 SFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGD 528
Score = 40.8 bits (94), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 95/283 (33%), Gaps = 87/283 (30%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G+ PNRV + LI N YC+ GN++ A M + L+ +
Sbjct: 438 GLVPNRVLHSTLIYN------YCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRC 491
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD----------MDSI--------- 213
+ AE + MS+ GL PS+ T+ ++ Y GD M+S+
Sbjct: 492 GRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTY 551
Query: 214 --------------KTKIPSLKPQSELFLCFSFQLTNLLILVS--SDMASAEGILTMMSQ 257
+ KI +P S + S +L L S ++++A +L M
Sbjct: 552 EGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVM 611
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
P + TYT L+ G + G M + AL +SG
Sbjct: 612 NNFVPDSFTYTSLIAGLCRKGKM----------------------VPALLLSGRA----- 644
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+ + L P+ YT L+ G K G
Sbjct: 645 -------------------IEKGLLSPNPAMYTSLVDGLLKEG 668
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 120/298 (40%), Gaps = 29/298 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y LL + D H ++E+ G P+ VT+ + L++ C+ G I
Sbjct: 333 DKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTF------TILVNALCKAGRIN 386
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L+ MR + + +N LI G +AN + A + + M G+EP+A TY L+
Sbjct: 387 EAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLI 446
Query: 202 CGYAKHGDMDSIKTKIPSLKPQS---ELFLCFS--FQLTNLLILVSSDMASAEGILTMMS 256
+ K G +K + + C + + L + + A+ + +
Sbjct: 447 DYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEM-----GRLGEAKAMFNELK 501
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
+GL P + TY +M Y+K G +D +LL++ D + I + ++
Sbjct: 502 SSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVE 561
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL-AQNG 373
E + C M + L P+ TY L+ G K G + +L + NG
Sbjct: 562 EAWQMFC------------RMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNG 607
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 156/405 (38%), Gaps = 46/405 (11%)
Query: 67 EDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS 126
E P VHT E +H +LRV+ E D + + Q I N TY +I
Sbjct: 116 ELPNVVHTTE-----TCNHMLEILRVHRRVEDMAFVFDLMQR---QIIRRNVDTYL-IIF 166
Query: 127 NSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMS 186
S I G + A LE MR+ F ++ +N LI+ Q+ A + M
Sbjct: 167 KSLFIR-----GGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMV 221
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
GL+PS +T++ LM K ++ ++ + ++ +++ + ++ +
Sbjct: 222 SEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKID 281
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDII 303
A I+ M G P TYT L+ +D L + SS D Y+ ++
Sbjct: 282 EAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLL 341
Query: 304 HALAVSGHGEYIDEVSA----------IVCF------------VNICFHWLEGPMMSQAG 341
+ GH + ++++ +V F +N F L+ M + G
Sbjct: 342 DKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLD--TMRKQG 399
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG---DYLDIIHALAVSGHGEYID 398
+ P+ TY L+ G + +D L + S V Y+ +I SGH
Sbjct: 400 VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKAL 459
Query: 399 EIISKIQP-GVGYSADAAN-HIYHLINKGQIDAAYRIVNTLARSA 441
E K++ G+ + A N +Y L G++ A + N L S
Sbjct: 460 ETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSG 504
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 121/333 (36%), Gaps = 65/333 (19%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL----- 124
F T EL V + YN L+ +L+ + + +++S G P+ TY L
Sbjct: 777 FVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHG 836
Query: 125 ------------------------ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEG 160
I+ + +IS + ++ A + + F +
Sbjct: 837 KSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPC 896
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-------- 212
F LI G ++ + A + M G P++ Y L+ GY K G +D+
Sbjct: 897 TFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRM 956
Query: 213 IKTKI-PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K I P LK S+ + ++ ++ + A + QAGL+P Y ++
Sbjct: 957 VKEGIRPDLK---------SYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMI 1007
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNIC 328
G + + L + + + D Y +I L + G E ++ + F+
Sbjct: 1008 NGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFI--- 1064
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
GL+P+ TY L+ GY G+
Sbjct: 1065 ------------GLKPNVFTYNALIRGYTLSGN 1085
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN ++ ++ T +++++GI P+ TY LI N ++ G IE
Sbjct: 999 DLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIV------GMIE 1052
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A KI E ++ + +NALI G++ + + A GI M G +P+ T+ +L
Sbjct: 1053 EAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 101/274 (36%), Gaps = 25/274 (9%)
Query: 89 LLRVYLDNEHTFSPTDFLAKLESQ-GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL 147
+++V ++ T + K + G++P Y LI + + N+E A +
Sbjct: 760 IIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDG------FLEVHNVEVAWNLF 813
Query: 148 EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 207
E M+ +N+LI H ++ + + M G +P+ TY ++ K
Sbjct: 814 EEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKS 873
Query: 208 GDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTY 267
+D +L +F +L S + A + M G P++ Y
Sbjct: 874 NRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIY 933
Query: 268 TKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCF 324
L+ GY K G +D+ + + D Y ++ L ++G
Sbjct: 934 NILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGR------------- 980
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
V+ H+ E + QAGL+P Y ++ G +
Sbjct: 981 VDDALHYFEK--LKQAGLDPDLVAYNLMINGLGR 1012
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y A++ Y +E L++++ QG+ PN TY + LI +C+ GN E A +
Sbjct: 346 YTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTY------TTLIDGHCKAGNFERAYE 399
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
++ M ++ F + +NA++ G + + A +L + GL+ TYT L+ +
Sbjct: 400 LMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHC 459
Query: 206 KHGDMDS--------IKTKI-PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
K ++ +K+ I P + + L F + M +E
Sbjct: 460 KQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCRE---------KRMKESEMFFEEAV 510
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDM 280
+ GL P+ +TYT ++CGY + G++
Sbjct: 511 RFGLVPTNKTYTSMICGYCREGNL 534
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 104/272 (38%), Gaps = 34/272 (12%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL + S+ +PN +TY + +IS YC+D + A +L M+++ + +
Sbjct: 330 FLKLVRSENHKPNVLTY------TAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTT 383
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
LI GH +A + A ++ +M++ G P+ TY ++ G K G + + S
Sbjct: 384 LIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNG 443
Query: 225 ELFLCFSFQLTNLLILVSSDMASAE-----GILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
IL+S AE + M ++G++P +YT L+ + +
Sbjct: 444 -----LDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKR 498
Query: 280 MDSVRRLLAQS---GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM 336
M ++ G N Y +I G+ + FH
Sbjct: 499 MKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKF----------FH-----R 543
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
MS G + TY L+ G K +D R L
Sbjct: 544 MSDHGCASDSITYGALISGLCKQSKLDEARCL 575
Score = 46.2 bits (108), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI Y L+ V+ + F + G+ P TY + +I YC++GN+
Sbjct: 482 DIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTY------TSMICGYCREGNLR 535
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K M D + ALI G + + + A + M + GL P T L
Sbjct: 536 LALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLA 595
Query: 202 CGYAKHGD 209
Y K D
Sbjct: 596 YEYCKIDD 603
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN V++ + LI +C+DG ++
Sbjct: 205 DVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSF------TTLIDGHCKDGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ + + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +L+ +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLMKE 406
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 133/303 (43%), Gaps = 35/303 (11%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS ++ LM GY K GD++
Sbjct: 132 YPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S + A + M GL P++ ++T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKLDDANELFDEMLDNGLVPNSVSFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNIC 328
G+ K G +D + Q S ++ D Y +I+ L +G + ++ +N
Sbjct: 249 DGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDL------IN-- 300
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDII 385
MS GL+P TYT L+ G K GD+++ R+ + + L + Y +I
Sbjct: 301 -------EMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALI 353
Query: 386 HALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARS 440
L G + + E++S ++P +G N KG + +++ + R
Sbjct: 354 SGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLMKEMQRD 410
Query: 441 ANI 443
+
Sbjct: 411 GYV 413
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 41/325 (12%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L L + G+ P RV Y + LI+ YCQ G +EGA M+ + +N
Sbjct: 176 EVLQSLVNAGLVPTRVIY------NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 229
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
ALI G +A + +A+ +L M G+ P+ +T+ L+ Y + G ++ + ++
Sbjct: 230 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 289
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
S+ + + A IL M + P+AQ Y ++ Y +HG D
Sbjct: 290 GLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQA 349
Query: 284 RRLLAQSGS-----SLVNGDYL--------------DIIHALAVSGHGEYIDEVSAIVCF 324
L+ + S S+V + L +II++L S H D VS
Sbjct: 350 FILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL--SNHRLIPDAVSYNTLI 407
Query: 325 VNICFHW-LEGPM-----MSQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSS 375
C+ ++ + M + G++ + +TY +L+ G G +M+ + + + QN
Sbjct: 408 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVV 467
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEI 400
N IH + V + +Y +EI
Sbjct: 468 PSNA-----IHNIMVEAYSKYGNEI 487
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 53/239 (22%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S L++ C+DG + A ++L+ + + + ++N LI G+ Q ++ A M
Sbjct: 159 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 218
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
++P TY L+ G LC + ++TN
Sbjct: 219 RHIKPDHITYNALING------------------------LCKAERITN----------- 243
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIH 304
A+ +L M G+ P+ +T+ L+ Y + G ++ +L++ + + + Y I++
Sbjct: 244 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 303
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
A +G ++ V ++ FH + P+AQ Y ++ Y +HG D
Sbjct: 304 AFCKNG------KIPEAVAILDDMFH---------KDVLPNAQVYNAIIDAYVEHGPND 347
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 104/240 (43%), Gaps = 28/240 (11%)
Query: 151 RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210
RD P + +N +I G +A A + M++ + P+ TY ++ G+ K GD+
Sbjct: 7 RDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDL 66
Query: 211 DS---IKTKI--PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
++ ++ ++ LKP + + ++ L+ L + M +L M+ + P
Sbjct: 67 EAGFRLRDQMVCHGLKPNA---ITYNVLLSGL--CRAGRMGETSALLDEMASQKMVPDGF 121
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN-GDYLD--IIHALAVSGHGEYIDEVSAIV 322
TY+ L G +++GD ++ L + + V GDY +++ L G +EV +
Sbjct: 122 TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV--LQ 179
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL 382
VN AGL P+ Y L+ GY + G+++ Q S + D++
Sbjct: 180 SLVN-------------AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 226
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 113/290 (38%), Gaps = 54/290 (18%)
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A ++ + M ++ + +N +I GH + D+ + + M GL+P+A TY L+
Sbjct: 34 AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS 93
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL---------------------------- 234
G + G M + + Q + F++ +
Sbjct: 94 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTI 153
Query: 235 -----TNLLILVSSD--MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ LL + D ++ AE +L + AGL P+ Y L+ GY + G+++
Sbjct: 154 GDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 213
Query: 288 AQSGSSLVNGDYLDIIHALAVSG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
Q S + D+ I + ++G E I ++ +E M G+ P+
Sbjct: 214 GQMKSRHIKPDH--ITYNALINGLCKAERITNAQDLL---------ME---MQDNGVNPT 259
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLA---QNGSSLVNGDYLDIIHALAVSG 392
+T+ L+ Y + G ++ +L+ +NG Y I++A +G
Sbjct: 260 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNG 309
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 29/161 (18%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI------------ 125
DV + YNA++ Y+++ + K++S GI P+ VTY LI
Sbjct: 325 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 384
Query: 126 -----------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
S + LIS C GNI+ A + + M + ++ LI G
Sbjct: 385 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG 444
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 209
A + E + M Q + PS + ++ Y+K+G+
Sbjct: 445 LGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 485
>gi|296083392|emb|CBI23347.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 143/340 (42%), Gaps = 31/340 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+ + +N ++ Y N + + + + GI PN+VTY + LI C+ G ++
Sbjct: 93 NCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTY------NILIHALCKKGLLK 146
Query: 142 GATKILE-FMRDKTFPISEGVFNALIY--GHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
A K+LE + D + + + I+ G + DM A M Q G + Y
Sbjct: 147 DARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYN 206
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G+ DM+S + + L F++ ++ A I +MS+
Sbjct: 207 VLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKM 266
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
G P +Y ++ G HGD+ + L +L+ + L I + + GHG + D
Sbjct: 267 GAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPL--IWNVVIDGHGRHGDLS 324
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSS 375
+A+ + M+S G+ P+ TY L+ K G D SI++
Sbjct: 325 NALS---------IRDQMVS-FGIPPNVFTYNALIHAQIKGGNIVDAHSIKK------EM 368
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAA 415
L+NG Y D+I + GH +E+++K+Q G S D A
Sbjct: 369 LLNGIYPDLIRGFCIRGHVMEAEELLAKLQRS-GLSIDHA 407
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 90/243 (37%), Gaps = 50/243 (20%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
+D+ YN L+ + + S + ++ +G+ P+ TY LIS +C+ GN+
Sbjct: 200 IDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISG------FCKIGNL 253
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A I M + +I G D+ A L M + + P + +
Sbjct: 254 DEACYIHGVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVV 313
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ G+ +HG D+++A I M G+
Sbjct: 314 IDGHGRHG-----------------------------------DLSNALSIRDQMVSFGI 338
Query: 261 EPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
P+ TY L+ K G D S+++ L+NG Y D+I + GH +E
Sbjct: 339 PPNVFTYNALIHAQIKGGNIVDAHSIKK------EMLLNGIYPDLIRGFCIRGHVMEAEE 392
Query: 318 VSA 320
+ A
Sbjct: 393 LLA 395
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ + + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +LL +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 129/305 (42%), Gaps = 43/305 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ L PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+++ R+ + + L + Y
Sbjct: 302 ------------MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 382 LDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
+I L G + + E++S ++P +G N KG + +++
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLLKE 406
Query: 437 LARSA 441
+ R
Sbjct: 407 MQRDG 411
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 120/299 (40%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + + P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 93/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C++G +
Sbjct: 205 DVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTF------TTLIDGHCKNGRVX 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+++ + ++ ++ + AE +L M GL+
Sbjct: 319 DGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ + K GD+ + +LL +
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 47/309 (15%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMEDANELFEEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGD----MDSVRRLLAQSGS-SLVNGDYLDIIHALAVSGH----GEYIDEVSAIV 322
G+ K+G M+ +++L+QS S L+ Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVXLAMEIYKQMLSQSLSPDLIT--YNTLIYGLCKKGDLKQAQDLIDE----- 301
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNG 379
MS GL+P TYT L+ G K GD+++ R+ + + L +
Sbjct: 302 --------------MSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDV 347
Query: 380 DYLDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIV 434
Y +I L G + + E++S ++P +G N KG + +++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLL 404
Query: 435 NTLARSANI 443
+ R +
Sbjct: 405 KEMQRDGYV 413
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 123/304 (40%), Gaps = 34/304 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGV 242
Query: 196 TYTKLMCGYAKHGD----MDSIKTKIP-SLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
T+T L+ G+ K+G M+ K + SL P + + L D+ A+
Sbjct: 243 TFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCK-----KGDLKQAQD 297
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALA 307
++ MS GL+P TYT L+ G K GD+++ R+ + + L + Y +I L
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLC 357
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
G +D + M GL+P TYT ++ + K GD+ + +
Sbjct: 358 QEGRS--VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 368 LLAQ 371
LL +
Sbjct: 403 LLKE 406
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 131/305 (42%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS ++ LM GY K GD++
Sbjct: 132 YPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+++ R+++ + L + Y
Sbjct: 302 ------------MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAY 349
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG + + I KG + +++ +
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLS-VGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 408
Query: 439 RSANI 443
R +
Sbjct: 409 RDGYV 413
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 99/210 (47%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ + + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+ TYT ++ + K GD+ + +L+ +
Sbjct: 377 LKLEIGTYTMIINEFCKKGDVWTGSKLMKE 406
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 119/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+++ R+++ + L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+ TYT ++ + K GD+ + +L+ +
Sbjct: 363 --VDAEKML-------------REMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKE 406
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ + + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +LL +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 129/305 (42%), Gaps = 43/305 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ L PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+++ R+ + + L + Y
Sbjct: 302 ------------MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 382 LDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
+I L G + + E++S ++P +G N KG + +++
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLLKE 406
Query: 437 LARSA 441
+ R
Sbjct: 407 MQRDG 411
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 120/299 (40%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + + P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 22/302 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P ++ +Y A + + L ++ +G++PN + +++ LI C
Sbjct: 244 ETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPN------VYTHTTLIDGLC 297
Query: 136 QDGNIEGATKI-LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G E A ++ L+ ++ ++ + + +I G+ + +A AE +L M + GL+P+
Sbjct: 298 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 357
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TYT L+ G+ K G D + +K + L +++ + A +L M
Sbjct: 358 NTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRM 417
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
+ GL+ TYT L+ + K G + L + + D ++
Sbjct: 418 ATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQ 477
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQ 371
++E F + C GL P+ QTYT ++ GY K G R+ + Q
Sbjct: 478 MEESQK---FFDKCL---------MIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQ 525
Query: 372 NG 373
NG
Sbjct: 526 NG 527
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 16/210 (7%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ QG++PN TY LI +C+ G+ + A +++ M+ + F + +NA
Sbjct: 344 LLVRMVEQGLKPNTNTYTTLIGG------HCKGGSFDRAFELMNKMKQEGFLPNIYTYNA 397
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+I G + + A +L M + GL+ TYT L+ + K G I +
Sbjct: 398 VIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQG---HITYALDLFDRMV 454
Query: 225 ELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
E C + LI M ++ GL P+ QTYT ++ GY K G
Sbjct: 455 ENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRST 514
Query: 282 SVRRLLAQSGSSLVNGDYLD-IIHALAVSG 310
R+ + + NG + D I + +SG
Sbjct: 515 LALRVFER---MVQNGCFADSITYGALISG 541
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 97/256 (37%), Gaps = 30/256 (11%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
G LP + +PL + N +LRV L+ + G+ P+ ++
Sbjct: 125 GRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAGVCPDERSF 184
Query: 122 QQLI-----------------------------SNSKLISKYCQDGNIEGATKILEFMRD 152
+ L+ + + ++ C+ G + ++ M +
Sbjct: 185 RALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLE 244
Query: 153 KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD- 211
P + + A I G + + A +L M GL+P+ T+T L+ G K G +
Sbjct: 245 TGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTER 304
Query: 212 SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+ + + +K S ++ + +A AE +L M + GL+P+ TYT L+
Sbjct: 305 AFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLI 364
Query: 272 CGYAKHGDMDSVRRLL 287
G+ K G D L+
Sbjct: 365 GGHCKGGSFDRAFELM 380
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 141/332 (42%), Gaps = 45/332 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ DI YN LL + GI P+ TY S L+ + +
Sbjct: 248 IQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTY------SYLVETFGKLN 301
Query: 139 NIEGATKILEFMRDK-TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+E +++L+ M +FP +N L+ H+Q+ + A G+ M AG P+A TY
Sbjct: 302 RLEKVSELLKEMESGGSFPDITS-YNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATY 360
Query: 198 TKLMCGYAKHGDMDSIK-----TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ L+ Y +HG D ++ K+ + +P + + N+LI V + + ++
Sbjct: 361 SILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATY--------NILINVFGEGGYFKEVV 412
Query: 253 TM---MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHAL 306
T+ M + +EP+ +TY L+ K G + +++L + G + Y +I A
Sbjct: 413 TLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAY 472
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG---DMD 363
G +E A+V F M++ G +P+ +TY L+ +AK G + +
Sbjct: 473 ---GQAALYEE--ALVAF----------NTMNEVGSKPTVETYNSLIQMFAKGGLYKESE 517
Query: 364 SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGE 395
+I + Q+G + + +I A G E
Sbjct: 518 AILLKMGQSGVARNRDTFNGVIEAFRQGGQFE 549
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 115/280 (41%), Gaps = 25/280 (8%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I ++G +E +I + M S F ALI + + S+ +L M +
Sbjct: 152 MIGVLGREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKER 211
Query: 190 LEPSAQTYTKLMCGYAKHG-DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA-- 246
+ PS TY ++ A+ G D + + ++ + + N L+ +
Sbjct: 212 VSPSILTYNTVINSCARGGLDWEELLGLFAQMRHEG---IQADIVTYNTLLSACARRGLG 268
Query: 247 -SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVN-GDYLDI 302
AE + M++ G+ P TY+ L+ + K ++ V LL +SG S + Y +
Sbjct: 269 DEAEMVFRTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVL 328
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ A A SG I E + F ++G AG P+A TY+ L+ Y +HG
Sbjct: 329 LEAHAQSGS---IKEAMGV-------FRQMQG-----AGCVPNAATYSILLNLYGRHGRY 373
Query: 363 DSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIIS 402
D +R L + S + + V G G Y E+++
Sbjct: 374 DDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVT 413
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 148/399 (37%), Gaps = 67/399 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI+ YN LL + + +++ G PN TY S L++ Y + G +
Sbjct: 321 DITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATY------SILLNLYGRHGRYD 374
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ M+ + +N LI + + M + +EP+ +TY L+
Sbjct: 375 DVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLI 434
Query: 202 --CGYAK-HGDMDSI------KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
CG H D I K +PS K + + + LV+
Sbjct: 435 FACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVA---------F 485
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
M++ G +P+ +TY L+ +AK G + +++ + QSG + + +I A
Sbjct: 486 NTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQG 545
Query: 310 GHGE-------------------YIDEVSAIVCFVNICFHWLEGPMMSQA-GLEPSAQTY 349
G E ++ V ++ CF + E +A G+ PS Y
Sbjct: 546 GQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCY 605
Query: 350 TKLMCGYAKHGDMDSIRRLLAQNGSS-----------LVNGDYLDIIHALAVSGHGEYID 398
++ YAK D +LL + ++ ++ GDY D + V EY+
Sbjct: 606 CMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMV----EYVF 661
Query: 399 EIISK--IQPGVGYSADAANHIYHLINKGQIDAAYRIVN 435
E + GV + ++ L GQ + A R++N
Sbjct: 662 EKLKSEGCSLGVRFYNTLLEALWWL---GQKERATRVLN 697
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ + + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +LL +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 129/305 (42%), Gaps = 43/305 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ L PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMDDANELFDEMIDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+++ R+ + + L + Y
Sbjct: 302 ------------MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 382 LDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
+I L G + + E++S ++P +G N KG + +++
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLLKE 406
Query: 437 LARSA 441
+ R
Sbjct: 407 MQRDG 411
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 120/299 (40%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + + P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 12/203 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y +++ Y + ++++ QG+ PN TY + LI+ +C+ GN +
Sbjct: 380 NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTY------TTLINGHCKAGNFD 433
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +++ M D+ F + +NA+I + + A +L GLE TYT L+
Sbjct: 434 RAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILI 493
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQA 258
K D IK + ++ +L N+LI M +E + ++
Sbjct: 494 QEQCKQSD---IKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSL 550
Query: 259 GLEPSAQTYTKLMCGYAKHGDMD 281
GL P+ +TYT ++ GY K GD D
Sbjct: 551 GLVPTKETYTSMISGYCKEGDFD 573
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 6/198 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YNA++ + L K S G+E + VTY + LI + C+ +I+
Sbjct: 450 NIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTY------TILIQEQCKQSDIK 503
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A M F + N LI + M +E + ++ GL P+ +TYT ++
Sbjct: 504 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMI 563
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K GD D ++K + F++ + S + A + M GL
Sbjct: 564 SGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 623
Query: 262 PSAQTYTKLMCGYAKHGD 279
P T L Y K D
Sbjct: 624 PPEVTRVTLAYEYCKRND 641
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 107/295 (36%), Gaps = 54/295 (18%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFM-------------- 150
+ K+ G +PN LI+ + LI C+ G+I+ A ++LE M
Sbjct: 297 YFRKMIDLGFKPN------LINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 350
Query: 151 ----------------------RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
R + + + ++I G+ + + + AE + + M +
Sbjct: 351 LIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 410
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASA 248
GL P+ TYT L+ G+ K G+ D + + + +++ + S A
Sbjct: 411 GLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEA 470
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
+L GLE TYT L+ K D+ + + D +A
Sbjct: 471 YELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAA 530
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+ + E + ++ GL P+ +TYT ++ GY K GD D
Sbjct: 531 FCRQKKMKESERLF------------QLVVSLGLVPTKETYTSMISGYCKEGDFD 573
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
+L+ + +G P+ T + ++S C++G + A M D F + F +
Sbjct: 262 WLSGMIQRGFIPDNATC------TLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTS 315
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
LI G + + A +L M + G +P+ T+T L+ G K G + L +S
Sbjct: 316 LIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL-VRS 374
Query: 225 ELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+++ T+++ + AE + + M + GL P+ TYT L+ G+ K G+ D
Sbjct: 375 DIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDR 434
Query: 283 VRRLL 287
L+
Sbjct: 435 AYELM 439
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/467 (20%), Positives = 172/467 (36%), Gaps = 93/467 (19%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI--------- 125
G+ + D YN +L D L ++S+G+ PNR TY L+
Sbjct: 235 GKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWL 294
Query: 126 --------------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
+ + LI+ C +G IE A K+ + M + +N L
Sbjct: 295 KEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTL 354
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I G + + ++ A +L MS+ G++P+A T+ ++ Y K G MD
Sbjct: 355 INGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD-------------- 400
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
A +T M ++G P TY L+ GY K G+M R
Sbjct: 401 ---------------------DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFR 439
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ + G + D + + L + ++E ++ + G
Sbjct: 440 TMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL------------SSARKRGYFID 487
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV---NGDYLDIIHALAVSGHGEY-IDEII 401
+Y L+ GY K G++D +L + + Y II L G E I ++
Sbjct: 488 EVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLN 547
Query: 402 SKIQPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLARSA--------NINGEQLPVGG 452
++ G+ N I H +G ++ A++ N + ++ NI L + G
Sbjct: 548 ELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEG 607
Query: 453 FLVRHMVKTNQ-PGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 495
L + + N G + D + I L +G++D A+ +++ +
Sbjct: 608 MLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 144/370 (38%), Gaps = 72/370 (19%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+L + +++ +N ++ Y +FL + P+ VTY + ++ C
Sbjct: 201 KLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTY------NTILDALC 254
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G + A +L M+ + + +N L+YG+ + + A ++ +M+Q L P
Sbjct: 255 KKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVW 314
Query: 196 TYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAE 249
TY L+ G G ++ ++ ++ +LK ++ S+ N LI L S ++ A
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVV---SY---NTLINGCLEWSKISEAF 368
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+L MS+ G++P+A T+ ++ Y K G MD + +
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITK-------------------- 408
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
M ++G P TY L+ GY K G+M R +
Sbjct: 409 ---------------------------MEESGFSPDCVTYNTLINGYCKAGNMGEAFRTM 441
Query: 370 AQNGSSLVNGDYL---DIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLIN 423
+ G + D + I+ L E +++S + GY D ++ I
Sbjct: 442 DEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR-GYFIDEVSYGTLIVGYFK 500
Query: 424 KGQIDAAYRI 433
G +D A ++
Sbjct: 501 DGNVDRALKL 510
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 99/248 (39%), Gaps = 25/248 (10%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
G ++ +D N +LR + L+ +G + V+Y LI Y
Sbjct: 445 GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVG------Y 498
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+DGN++ A K+ + M++K S +N +I G Q A L + ++GL P
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558
Query: 195 QTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL---ILVSSDMA 246
TY ++ GY + GD++ K S KP ++F C N+L + + +
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKP--DVFTC------NILLRGLCMEGMLE 610
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDII 303
A + G TY L+ K G +D LL++ + D Y II
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAII 670
Query: 304 HALAVSGH 311
AL SG
Sbjct: 671 TALTDSGR 678
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 12/211 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ LI +C++G ++
Sbjct: 197 DVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDG------HCKNGRVD 250
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ ++ M GL+P TYT L+
Sbjct: 251 LAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLI 310
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS--AEGILTMMSQA 258
G K GD+++ + + ++ L T L+ + + S AE +L M
Sbjct: 311 DGCCKEGDLETAFEHRKRMIQENIRL---DDVVYTTLISGLCQEGRSVDAEKMLREMLSV 367
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
GL+P TYT ++ + K GD+ + +LL +
Sbjct: 368 GLKPDTGTYTMIINEFCKKGDVWTGSKLLKE 398
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 129/305 (42%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A + +++ GL PS ++ LM GY + GD+D
Sbjct: 124 YPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 183
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + + +++ +S + L S + A + M GL P+ T+T L+
Sbjct: 184 RLKSAMHASGVEPDVYT-YSVLINGL--CKESKIDGANELFDEMLDKGLVPNGVTFTTLI 240
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G IDE
Sbjct: 241 DGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDE------- 293
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
M GL+P TYT L+ G K GD+++ R+ + Q L + Y
Sbjct: 294 ------------MRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVY 341
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG D + I KG + +++ +
Sbjct: 342 TTLISGLCQEGRSVDAEKMLREMLS-VGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 400
Query: 439 RSANI 443
R ++
Sbjct: 401 RDGHV 405
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 118/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + G+ P+ V++ L++ Y
Sbjct: 121 ECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNG------YI 174
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M ++ LI G + + + A + M GL P+
Sbjct: 175 RLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGV 234
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 235 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEM 294
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
GL+P TYT L+ G K GD+++ R+ + Q L + Y +I L G
Sbjct: 295 RMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRS 354
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 355 --VDAEKML-------------REMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKE 398
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 136/325 (41%), Gaps = 41/325 (12%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L L + G+ P RV Y + LI+ YCQ G +EGA M+ + +N
Sbjct: 224 EVLQSLVNAGLVPTRVIY------NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYN 277
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
ALI G +A + +A+ +L M G+ P+ +T+ L+ Y + G ++ + ++
Sbjct: 278 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 337
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
S+ + + A IL M + P+AQ Y ++ Y +HG D
Sbjct: 338 GLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQA 397
Query: 284 RRLLAQSGS-----SLVNGDYL--------------DIIHALAVSGHGEYIDEVSAIVCF 324
L+ + S S+V + L +II++L S H D VS
Sbjct: 398 FILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL--SNHRLIPDAVSYNTLI 455
Query: 325 VNICFHW-LEGPM-----MSQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSS 375
C+ ++ + M + G++ + +TY +L+ G G +M+ + + + QN
Sbjct: 456 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVV 515
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEI 400
N IH + V + +Y +EI
Sbjct: 516 PSNA-----IHNIMVEAYSKYGNEI 535
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 53/239 (22%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S L++ C+DG + A ++L+ + + + ++N LI G+ Q ++ A M
Sbjct: 207 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 266
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
++P TY L+ G LC + ++TN
Sbjct: 267 RHIKPDHITYNALING------------------------LCKAERITN----------- 291
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIH 304
A+ +L M G+ P+ +T+ L+ Y + G ++ +L++ + + + Y I++
Sbjct: 292 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 351
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
A +G ++ V ++ FH + P+AQ Y ++ Y +HG D
Sbjct: 352 AFCKNG------KIPEAVAILDDMFH---------KDVLPNAQVYNAIIDAYVEHGPND 395
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 120/283 (42%), Gaps = 35/283 (12%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFM-RDKTFPISEGVFNALIY 167
L S G P+ + +K + G++ A +L M RD P + +N +I
Sbjct: 18 LASAGARPDTFAW------NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIA 71
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKI--PSLKP 222
G +A A + M++ + P+ TY ++ G+ K GD+++ ++ ++ LKP
Sbjct: 72 GMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKP 131
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+ + ++ L+ L + M +L M+ + P TY+ L G +++GD +
Sbjct: 132 NA---ITYNVLLSGL--CRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 186
Query: 283 VRRLLAQSGSSLVN-GDYLD--IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+ L + + V GDY +++ L G +EV + VN
Sbjct: 187 MLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV--LQSLVN------------- 231
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL 382
AGL P+ Y L+ GY + G+++ Q S + D++
Sbjct: 232 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 274
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 123/317 (38%), Gaps = 60/317 (18%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
PN +Y + +I+ + G A ++ + M ++ + +N +I GH + D+
Sbjct: 61 PNAFSY------NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDL 114
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL- 234
+ + M GL+P+A TY L+ G + G M + + Q + F++ +
Sbjct: 115 EAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSIL 174
Query: 235 --------------------------------TNLLILVSSD--MASAEGILTMMSQAGL 260
+ LL + D ++ AE +L + AGL
Sbjct: 175 FDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGL 234
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG--HGEYIDEV 318
P+ Y L+ GY + G+++ Q S + D+ I + ++G E I
Sbjct: 235 VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDH--ITYNALINGLCKAERITNA 292
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSS 375
++ +E M G+ P+ +T+ L+ Y + G ++ +L+ +NG
Sbjct: 293 QDLL---------ME---MQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLK 340
Query: 376 LVNGDYLDIIHALAVSG 392
Y I++A +G
Sbjct: 341 PNVVSYGSIVNAFCKNG 357
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 6/137 (4%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
DV + YNA++ Y+++ + K++S GI P+ VTY LI C
Sbjct: 373 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG------LCNQ 426
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
I A +I+ + + +N LI ++ A + M + G++ + +TY
Sbjct: 427 SQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTY 486
Query: 198 TKLMCGYAKHGDMDSIK 214
+L+ G G ++ ++
Sbjct: 487 HQLISGLGGAGRLNEME 503
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 128/314 (40%), Gaps = 57/314 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI---SNSKLISKYCQD----- 137
Y ++ N + + L ++ S+G++PN Y LI S IS C+
Sbjct: 458 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMT 517
Query: 138 ---------------------GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
G IE A + ++ + E ++ LI+G+ + ++
Sbjct: 518 KANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLE 577
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFS 231
A+ +L M +GL+P+A TYT L+ GY K D + + + + S+ KP + ++
Sbjct: 578 KADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVI 637
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---A 288
L+ S +M A +LT + + GL P Y+ L+ G K DM+ LL A
Sbjct: 638 RNLSR-----SENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMA 692
Query: 289 QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
+ G Y +I SG D A F +I GL P+ T
Sbjct: 693 KEGLEPGIVCYNALIDGFCRSG-----DISRARNVFDSIL----------AKGLLPNCVT 737
Query: 349 YTKLMCGYAKHGDM 362
YT L+ G K+GD+
Sbjct: 738 YTALIDGNCKNGDI 751
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 130/313 (41%), Gaps = 51/313 (16%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ ++ D L ++ S G++PN++ Y LI C+ G + A+K
Sbjct: 353 YATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRG------LCKIGQLGRASK 406
Query: 146 ILEFM-----RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+L M R TF ++ L+ GH Q D A +L M +G+ P+A TY +
Sbjct: 407 LLNEMIKVGHRPDTF-----TYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIM 461
Query: 201 MCGYAKHGDMDSIKTKIP-----SLKPQSELFLCFSFQLTNLLILVSSD--MASAEGILT 253
+ G ++G+ + LKP + F L+I S + ++ A L
Sbjct: 462 INGLCQNGESKEAGNLLEEMISEGLKPNA-------FMYAPLIIGHSKEGHISLACESLE 514
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSG 310
M++A + P Y L+ G + G ++ AQ + D Y +IH +
Sbjct: 515 NMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTR 574
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+ E D++ M +GL+P+A TYT L+ GY K D + + +L
Sbjct: 575 NLEKADQLLQ---------------QMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQ 619
Query: 371 QNGSSLVNGDYLD 383
S L +GD D
Sbjct: 620 ---SMLGSGDKPD 629
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 136/344 (39%), Gaps = 49/344 (14%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P D+ Y+ L + + ++ + N VTY +IS C+ G
Sbjct: 241 IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISG------LCRSG 294
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A E M D + AL+ G + + A+ +L MS +GL+P+ Y
Sbjct: 295 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYA 354
Query: 199 KLMCGYAKHGD----MDSIKTKIPS-LKPQSELFLCFSFQLTNLL--ILVSSDMASAEGI 251
L+ G+ K G D + I + ++P ++ NL+ + + A +
Sbjct: 355 TLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMY-------DNLIRGLCKIGQLGRASKL 407
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS--LVNG-DYLDIIHALAV 308
L M + G P TY LM G+ +H D D LL + +S L N Y +I+ L
Sbjct: 408 LNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQ 467
Query: 309 SGH----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
+G G ++E M GL+P+A Y L+ G++K G +
Sbjct: 468 NGESKEAGNLLEE-------------------MISEGLKPNAFMYAPLIIGHSKEGHISL 508
Query: 365 IRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQ 405
L + V D Y +I L+ G E +E +++Q
Sbjct: 509 ACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQ 552
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 99/242 (40%), Gaps = 12/242 (4%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ Y ++G++ A +++ M D + N L+ +A+ M + M AG
Sbjct: 181 LVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAG 240
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+ P TY+ + + K D D+ K ++ + ++ + + S + A
Sbjct: 241 IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 300
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
G M GL P A TY LM G K G + + LL + S + + +++A V
Sbjct: 301 GFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNV--VVYATLVD 358
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G ++ E A F + M AG++P+ Y L+ G K G + +LL
Sbjct: 359 G---FMKEGKAAEAFDIL-------NEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLL 408
Query: 370 AQ 371
+
Sbjct: 409 NE 410
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 21/189 (11%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L ++E G+ P+ Y S LIS C+ ++E A +L+ M + +NAL
Sbjct: 653 LTEVEKNGLVPDLHIY------SSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNAL 706
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM----DSIKTKIP-SL 220
I G ++ D++ A + + GL P+ TYT L+ G K+GD+ D K + +
Sbjct: 707 IDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGI 766
Query: 221 KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQT--YTKLMCGYAKHG 278
P + ++ N+L SD A E L + + A ++ L+ G+ K G
Sbjct: 767 APDAFVY--------NVLATGCSDAADLEQALFLTEEMFNRGYAHVSLFSTLVRGFCKRG 818
Query: 279 DMDSVRRLL 287
+ +LL
Sbjct: 819 RLQETEKLL 827
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 135/325 (41%), Gaps = 41/325 (12%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L L + G+ P RV Y LI+ YCQ G +EGA M+ + +N
Sbjct: 357 EVLQSLVNAGLVPTRVIYNTLING------YCQTGELEGAFSTFGQMKSRHIKPDHITYN 410
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
ALI G +A + +A+ +L M G+ P+ +T+ L+ Y + G ++ + ++
Sbjct: 411 ALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQEN 470
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
S+ + + A IL M + P+AQ Y ++ Y +HG D
Sbjct: 471 GLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQA 530
Query: 284 RRLLAQSGSS-----------LVNG--------DYLDIIHALAVSGHGEYIDEVSAIVCF 324
L+ + S+ L+ G + +II++L S H D VS
Sbjct: 531 FILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL--SNHRLIPDAVSYNTLI 588
Query: 325 VNICFHW-LEGPM-----MSQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSS 375
C+ ++ + M + G++ + +TY +L+ G G +M+ + + + QN
Sbjct: 589 SACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVV 648
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEI 400
N IH + V + +Y +EI
Sbjct: 649 PSNA-----IHNIMVEAYSKYGNEI 668
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFM-RDKTFPISEGVFNALIY 167
L S G P+ + +K + G++ A +L M RD P + +N +I
Sbjct: 151 LASAGARPDTFAW------NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIA 204
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKI--PSLKP 222
G +A A + M++ + P+ TY ++ G+ K GD++ S++ ++ LKP
Sbjct: 205 GMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKP 264
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+ + ++ L+ L + M +L M+ + P TY+ L G +++GD +
Sbjct: 265 NA---ITYNVLLSGL--CRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 319
Query: 283 VRRLLAQSGSSLVN-GDYLD--IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+ L +S + V GDY +++ L G +EV + VN
Sbjct: 320 MLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEV--LQSLVN------------- 364
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL 382
AGL P+ Y L+ GY + G+++ Q S + D++
Sbjct: 365 AGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHI 407
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 97/239 (40%), Gaps = 53/239 (22%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S L++ C+DG + A ++L+ + + + ++N LI G+ Q ++ A M
Sbjct: 340 SILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKS 399
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
++P TY L+ G LC + ++TN
Sbjct: 400 RHIKPDHITYNALING------------------------LCKAERITN----------- 424
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIH 304
A+ +L M G+ P+ +T+ L+ Y + G ++ +L++ + + + Y I++
Sbjct: 425 AQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVN 484
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
A +G ++ V ++ FH + P+AQ Y ++ Y +HG D
Sbjct: 485 AFCKNG------KIPEAVAILDDMFH---------KDVLPNAQVYNAIIDAYVEHGPND 528
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 64/161 (39%), Gaps = 29/161 (18%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI------------ 125
DV + YNA++ Y+++ + K++S GI P+ VTY LI
Sbjct: 506 DVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 565
Query: 126 -----------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
S + LIS C GNI+ A + + M + ++ LI G
Sbjct: 566 EEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISG 625
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 209
A + E + M Q + PS + ++ Y+K+G+
Sbjct: 626 LGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGN 666
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 125/302 (41%), Gaps = 22/302 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P ++ +Y A + + L ++ +G++PN + +++ LI C
Sbjct: 136 ETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPN------VYTHTTLIDGLC 189
Query: 136 QDGNIEGATKI-LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G E A ++ L+ ++ ++ + + +I G+ + +A AE +L M + GL+P+
Sbjct: 190 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 249
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TYT L+ G+ K G D + +K + L +++ + A +L M
Sbjct: 250 NTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRM 309
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
+ GL+ TYT L+ + K G + L + + D ++
Sbjct: 310 ATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQ 369
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQ 371
++E F + C GL P+ QTYT ++ GY K G R+ + Q
Sbjct: 370 MEESQK---FFDKCL---------MIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQ 417
Query: 372 NG 373
NG
Sbjct: 418 NG 419
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 16/210 (7%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ QG++PN TY + LI +C+ G+ + A +++ M+ + F + +NA
Sbjct: 236 LLVRMVEQGLKPNTNTY------TTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNA 289
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+I G + + A +L M + GL+ TYT L+ + K G I +
Sbjct: 290 VIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGH---ITYALDLFDRMV 346
Query: 225 ELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
E C + LI M ++ GL P+ QTYT ++ GY K G
Sbjct: 347 ENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRST 406
Query: 282 SVRRLLAQSGSSLVNGDYLD-IIHALAVSG 310
R+ + + NG + D I + +SG
Sbjct: 407 LALRVFER---MVQNGCFADSITYGALISG 433
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 1/159 (0%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++ C+ G + ++ M + P + + A I G + + A +L M G
Sbjct: 114 VVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG 173
Query: 190 LEPSAQTYTKLMCGYAKHGDMD-SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASA 248
L+P+ T+T L+ G K G + + + + +K S ++ + +A A
Sbjct: 174 LKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARA 233
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
E +L M + GL+P+ TYT L+ G+ K G D L+
Sbjct: 234 EMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELM 272
>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
Length = 561
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 42/188 (22%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ +G++PN VTY + LI C+ G +E A + + MR+K ++ +N+LI G
Sbjct: 77 MADRGLDPNEVTY------AILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYNSLING 130
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
+ + N+ A G+L M GL PS +Y+ L+ G + G
Sbjct: 131 YCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKG-------------------- 170
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
D+ASA + M++ + + T+T L+ G+ K G+MD RL
Sbjct: 171 ---------------DLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFH 215
Query: 289 Q-SGSSLV 295
+ SSLV
Sbjct: 216 KMMESSLV 223
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 100/242 (41%), Gaps = 32/242 (13%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-------- 127
E + + + YN+L+ Y + + L ++ ++G+ P+ +Y LI+
Sbjct: 114 EKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLA 173
Query: 128 ---------------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
+ LIS +C+DGN++ AT++ M + + +E FN +I
Sbjct: 174 SAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMI 233
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL 226
G+ + ++ A + M GL P TY L+ + ++K K ++
Sbjct: 234 EGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCL--TLGAMKAKEFVADLENNC 291
Query: 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+ SF LT L+ + SAE + M P++ TY + A G+++ + L
Sbjct: 292 AVLNSFSLTALMHGFCKE-GSAEILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVL 350
Query: 287 LA 288
A
Sbjct: 351 HA 352
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 97/252 (38%), Gaps = 53/252 (21%)
Query: 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGIL 182
L++ + I + +DG A K+ M D+ +E + LI+ + M A +
Sbjct: 50 NLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMF 109
Query: 183 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
M + G+ + Y L+ GY KH
Sbjct: 110 DRMREKGIRMTVYPYNSLINGYCKH----------------------------------- 134
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---Y 299
++ A G+L M GL PS +Y+ L+ G + GD+ S L + + V+G+ +
Sbjct: 135 NNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRNAVSGNVYTF 194
Query: 300 LDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
+I G+ +DE + + FH M ++ L P+ T+ ++ GY +
Sbjct: 195 TALISGFCKDGN---MDEATRL-------FH-----KMMESSLVPNEVTFNVMIEGYCRV 239
Query: 360 GDMDSIRRLLAQ 371
G++ +L Q
Sbjct: 240 GNIRKAFQLYDQ 251
>gi|255660946|gb|ACU25642.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 484
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I Y+AL +V L + K+ S+G EP R T+ +I +
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGNEPTRHTFNIMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREIMPDVVTYNTMIXGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDRVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AQKMSEARS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M + + P+ + + +L+ G K GD+D+ +L
Sbjct: 277 ILKEMVEKYITPTDNSIFLRLISGQCKAGDLDAAADVL 314
Score = 41.6 bits (96), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/236 (18%), Positives = 91/236 (38%), Gaps = 13/236 (5%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI Y + G ++ + K+ + M + + ++AL + A+ M G
Sbjct: 86 LIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
EP+ T+ ++ G+ G +++ +K + + ++ M AE
Sbjct: 146 NEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSREIMPDVVTYNTMIXGYYRVKKMEEAE 205
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 206 KYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLVEEMKGFGIKPNAITYSTLLPGL 265
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT-YTKLMCGYAKHGDMDS 364
+ + + E +I+ M + + P+ + + +L+ G K GD+D+
Sbjct: 266 CNAQKMSEARSIL------------KEMVEKYITPTDNSIFLRLISGQCKAGDLDA 309
>gi|449530002|ref|XP_004171986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cucumis sativus]
Length = 539
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 101/240 (42%), Gaps = 18/240 (7%)
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
I+ S ++ + G+I ++ E M ++ F + ++ I H + + A ++
Sbjct: 300 IAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQE 359
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
M GL+P +T+ L+ G A G + I + + + L C F + I D
Sbjct: 360 MENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLERGFLPSCSVFNVAIAKICEKGD 419
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN---GDYLD 301
+ A +LT++ G P TYT L+ GY K G++ + +L + G+ L++ +
Sbjct: 420 VKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYYEMGARLLSPGVSVFFA 479
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+I +L SG E ++ IV + L P Y L+ Y K G+
Sbjct: 480 LIGSLCQSGRLEEAEKYLKIV---------------KDSSLTPCLSIYQALILFYLKKGN 524
Score = 45.8 bits (107), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 60/154 (38%), Gaps = 22/154 (14%)
Query: 56 EPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIE 115
E L G LP F+V ++ D+ NALL + LD +G
Sbjct: 393 EKMLERGFLPSCSVFNVAIAKICEKGDVKKANALLTILLD----------------KGFL 436
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
P+ TY + LI Y + G I+ K+ M + VF ALI Q+ +
Sbjct: 437 PDETTY------TNLIIGYRKSGEIQEILKLYYEMGARLLSPGVSVFFALIGSLCQSGRL 490
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 209
AE L ++ + L P Y L+ Y K G+
Sbjct: 491 EEAEKYLKIVKDSSLTPCLSIYQALILFYLKKGN 524
>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 126/311 (40%), Gaps = 29/311 (9%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+F A+L+S G EP VTY L+ + + G A +L+ M + + P +N
Sbjct: 302 EFFAELKSCGYEPGTVTYNALLQ------VFGKAGVYTEALSVLKEMEENSCPADSVTYN 355
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
L+ + +A A G++ MM++ G+ P+A TYT ++ Y K G D S+K
Sbjct: 356 ELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA 415
Query: 224 SELFLCFSFQLT--NLLILVSSDMASAEGI--LTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
C T +L L+ S E I L M G P+ T+ ++ G
Sbjct: 416 G----CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGM 471
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
V R+ + S D D + L +S +G EV A + M++
Sbjct: 472 DKFVNRVFREMKSCGFEPDR-DTFNTL-ISAYGRCGSEVDASKMYGE----------MTR 519
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSSLVNGDYLDIIHALAVSGHGEY 396
AG TY L+ A+ GD S +++ G Y ++ A G+
Sbjct: 520 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLG 579
Query: 397 IDEIISKIQPG 407
I+ I ++I+ G
Sbjct: 580 IERIENRIKEG 590
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 162/429 (37%), Gaps = 72/429 (16%)
Query: 67 EDPFSVHTGELD-VPL-----DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVT 120
E +SV LD +PL D+ Y +L Y D +++ G P VT
Sbjct: 188 ESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVT 247
Query: 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEG 180
Y ++ + + + I G +L+ MR K E + ++ ++ + A+
Sbjct: 248 YNVILDVFGKMGRSWR--KILG---VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKE 302
Query: 181 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NLLI 239
+ G EP TY L+ + K G + T+ S+ + E C + +T N L+
Sbjct: 303 FFAELKSCGYEPGTVTYNALLQVFGKAG----VYTEALSVLKEMEENSCPADSVTYNELV 358
Query: 240 ---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN 296
+ + A G++ MM++ G+ P+A TYT ++ Y K G D +L +
Sbjct: 359 AAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV 418
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVC----------------------------FVNIC 328
+ L++ G +E+ ++C FVN
Sbjct: 419 PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRV 478
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSSLVNGDYLDII 385
F M G EP T+ L+ Y + G D + + + G + Y ++
Sbjct: 479 FR-----EMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALL 533
Query: 386 HALAVSGHGEYIDEIISKIQPG------VGYS------ADAANH-----IYHLINKGQID 428
+ALA G + +IS ++ YS A N+ I + I +GQI
Sbjct: 534 NALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIF 593
Query: 429 AAYRIVNTL 437
++ ++ TL
Sbjct: 594 PSWMLLRTL 602
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 117/270 (43%), Gaps = 30/270 (11%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+++S G EP+R T+ LIS Y + G+ A+K+ M F +NAL+
Sbjct: 481 EMKSCGFEPDRDTFNTLIS------AYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLN 534
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
++ D S E +++ M G +P+ +Y+ ++ YAK G+ I+ +I + + ++F
Sbjct: 535 ALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE-RIENRIKEGQIF 593
Query: 228 LCFSFQLTNLLILVS---SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
S+ L L+L + +A +E T+ + G +P + ++ + ++ D
Sbjct: 594 P--SWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAE 651
Query: 285 RLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
+L ++ D Y ++ G +E+ + ++
Sbjct: 652 GILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKT---------------LEKSQ 696
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
L+P +Y ++ G+ + G M R+L++
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSE 726
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN+L+ +Y+ + + L LE ++P+ V+Y + I +C+ G ++
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV------IKGFCRRGLMQ 718
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M ++ +N + G++ A E ++ M++ P+ T+ ++
Sbjct: 719 EAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVV 778
Query: 202 CGYAKHGD----MDSIKTKIPSLKPQSELFLCFSFQLTNLLIL 240
GY + G MD + +KI + P CF Q L L
Sbjct: 779 DGYCRAGKYSEAMDFV-SKIKTFDP------CFDDQSIQRLAL 814
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 108/301 (35%), Gaps = 68/301 (22%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS--NSKLISKYCQDGNIEGA 143
YNA+L + + L ++S G PNR T+ +++ +K + K+
Sbjct: 424 YNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKF--------V 475
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
++ M+ F FN LI + + A + M++AG TY L+
Sbjct: 476 NRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNA 535
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
A+ GD S E +++ M G +P+
Sbjct: 536 LARKGDW-----------------------------------RSGENVISDMKSKGFKPT 560
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI---------IHALAVS----- 309
+Y+ ++ YAK G+ + R+ + + ++ + ALA S
Sbjct: 561 ETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFT 620
Query: 310 ---GHGEYIDEV---SAIVCFV-NICFHWLEGPMMS--QAGLEPSAQTYTKLMCGYAKHG 360
HG D V S + F N + EG + S + GL P TY LM Y + G
Sbjct: 621 LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRG 680
Query: 361 D 361
+
Sbjct: 681 E 681
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
++ YNALL S + ++ ++S+G +P +Y S ++ Y + GN G
Sbjct: 526 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY------SLMLQCYAKGGNYLG 579
Query: 143 ATKILEFMRD-KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+I +++ + FP S + L+ + + +A +E T+ + G +P + ++
Sbjct: 580 IERIENRIKEGQIFP-SWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSML 638
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+ ++ D + + S++ ++ + + + AE IL + ++ L+
Sbjct: 639 SIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLK 698
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P +Y ++ G+ + G M R+L++
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQEAVRMLSE 726
>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
Length = 618
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 41/197 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+L+ + + F ++ + + P+ T S ++ C G ++ AT+
Sbjct: 316 YNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFT------CSIVVRGLCDGGQMQVATR 369
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
LE M+ ++ +N LI + ++ ++ A T MS+ G+EP+ TY+ L+ G++
Sbjct: 370 FLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHS 429
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K+G+M+ A I T M G+EP+
Sbjct: 430 KNGEME-----------------------------------IAMAIYTEMVAKGVEPNVV 454
Query: 266 TYTKLMCGYAKHGDMDS 282
TYT L+ G+AK+GDMD+
Sbjct: 455 TYTALIHGHAKNGDMDA 471
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 145/352 (41%), Gaps = 39/352 (11%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+++ G+ PN TY L+S S + +D + ++ P ++ +F LI
Sbjct: 233 EMKEAGMRPNLYTYNALMS-----SHFKRDNIKHALVFYYDLLKCGLVP-NDVIFTTLID 286
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM-----CGYAKHGDMDSIKTKIPSLKP 222
G +AN + A+ I M + + P+ Y L+ GYA+ + L+P
Sbjct: 287 GLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRP 346
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
F+ + + M A L +M Q+G+ +A Y L+ Y K G++D
Sbjct: 347 DE-----FTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDE 401
Query: 283 VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
L+ + S V + + ++ + GH + + A+ + M G+
Sbjct: 402 A--LVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTE----------MVAKGV 449
Query: 343 EPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNG--------SSLVNGDYLDIIHALAVS 391
EP+ TYT L+ G+AK+GDMD+ +++ + + G S LV+G + AV
Sbjct: 450 EPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVR 509
Query: 392 GHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANI 443
EY + S+ P + S IY L GQ + A + + S +
Sbjct: 510 FIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMV 561
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 133/328 (40%), Gaps = 58/328 (17%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ ++ +G+ P+ VTY LI+ + G++ A ++ + M + + +
Sbjct: 159 ELFDEMLGRGMVPSVVTYNTLINACR------HQGDVAKAWEVWDQMVARRIDPNVVTYT 212
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI------ 217
+IY + + + AEG+ M +AG+ P+ TY LM + H D+IK +
Sbjct: 213 TMIYALCEEDCIGDAEGLFLEMKEAGMRPNLYTYNALM---SSHFKRDNIKHALVFYYDL 269
Query: 218 --PSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM-- 271
L P +F T L+ + ++ + A+ I M + + P+ Y L+
Sbjct: 270 LKCGLVPNDVIF-------TTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHG 322
Query: 272 ---CGYAKHG-----------------DMDSVRRLLAQSGSSLVNGDYLDIIH----ALA 307
GYA+ V R L G V +L+++ AL
Sbjct: 323 AFRSGYAQEALAFFQEIIRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALN 382
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---S 364
+ + IDE N+ + MS+ G+EP+ TY+ L+ G++K+G+M+ +
Sbjct: 383 AAAYNVLIDEYCK---SGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMA 439
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSG 392
I + G Y +IH A +G
Sbjct: 440 IYTEMVAKGVEPNVVTYTALIHGHAKNG 467
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 12/206 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ L+ + YN L+ Y + + ++ G+EPN VTY S LI + ++G
Sbjct: 379 IALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTY------SSLIDGHSKNG 432
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A I M K + + ALI+GH++ DM +A + M + G+ +A T +
Sbjct: 433 EMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVS 492
Query: 199 KLMCGYAKHGDM-DSIKTKIP-SLKPQSELFLCFSFQLTNLLIL----VSSDMASAEGIL 252
L+ G + + D+++ + S + +SE + +T + ++ + A
Sbjct: 493 VLVDGLCRENRVQDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFF 552
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ M +G+ P TYT ++ G G
Sbjct: 553 SCMRDSGMVPDRFTYTLVIRGLCMLG 578
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 174/436 (39%), Gaps = 76/436 (17%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
L +PL + +N +LR + L ++ S PN VTY +I+ +C
Sbjct: 109 RLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAG------FC 158
Query: 136 QDGNIEGATKILEFMRDKT-FPISEGVFNALIYGHSQANDMASAEGIL-TMMSQAGLEPS 193
G ++ +I+ MR++ + + +I G + + A + M+++ +EP+
Sbjct: 159 ARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPN 218
Query: 194 AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF---LCFSFQLTNLLI---LVSSDMAS 247
A Y L+ GY G+++ +L+ + E+ + + NL + + A
Sbjct: 219 AVMYNALIGGYCDQGNLEV------ALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAE 272
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIH 304
A ++ M + GL P A TY L+ GY K G ++ + G Y +IH
Sbjct: 273 AHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIH 332
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
AL++ G + D + F + + G+ P Y L+ + GDMD
Sbjct: 333 ALSMKGMVQETDRL-----FNDAV----------RRGIRPDLFMYNALINSHCTGGDMDR 377
Query: 365 IRRLLAQNGSSLVNGD---YLDIIHALAVSGHGE----YIDEIISK-IQPGV-------- 408
++ + + D Y ++ L + G + I+E+ + IQP +
Sbjct: 378 AFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLIS 437
Query: 409 GYS-----ADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGG---FLVRHMVK 460
GYS DA ++ KG + N + + +NG+ GG LV+ MV
Sbjct: 438 GYSMKGDIKDAVKVRDEMMGKG-FNPTLLTYNAMIKGLCLNGQ----GGDAEDLVKEMV- 491
Query: 461 TNQPGVGYSADAANHI 476
G G + D + +I
Sbjct: 492 ----GNGITPDDSTYI 503
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+GI P+ Y LI++ +C G+++ A +I+ M K + +N L+ G
Sbjct: 353 RGIRPDLFMYNALINS------HCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCL 406
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTKIPSL-KPQSELFLC 229
+ A G++ M++ G++P +Y L+ GY+ GD+ D++K + + K + L
Sbjct: 407 LGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLT 466
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCG 273
++ + L + + AE ++ M G+ P TY L+ G
Sbjct: 467 YNAMIKGLCL--NGQGGDAEDLVKEMVGNGITPDDSTYISLIEG 508
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 125/322 (38%), Gaps = 77/322 (23%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L++ + L +++ +G PN VTY LI YC++GN+E
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDG------YCKEGNME 420
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ M +K + F+ LI G+ +A M +A G+ T M GL P YT L+
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K G+ +F+L M +AGL
Sbjct: 481 DGHFKDGNTKE------------------AFRLHK-----------------EMQEAGLH 505
Query: 262 PSAQTYTKLMCGYAKHGDM-DSVRRLLAQSGSSLVNGD---------------YLDIIHA 305
P+ T + L+ G K G + D+++ LA++G+ Y +I
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQG 565
Query: 306 LAVSGH----GEYIDEVSA-------IVCFVNICFHW----LEGPMMSQA-----GLEPS 345
L G ++ ++ C V I H+ L MM QA G+ P+
Sbjct: 566 LCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625
Query: 346 AQTYTKLMCGYAKHGDMDSIRR 367
+ Y L GY + G + S R
Sbjct: 626 SSVYRVLAKGYEESGYLKSALR 647
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 133/343 (38%), Gaps = 81/343 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY----------QQLISNSK------ 129
YN ++ Y H + ++ G+ PN VT+ +++S K
Sbjct: 266 YNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMA 325
Query: 130 -------------LISKYCQDGNIEGATKI-LEFMRDKTFPISEGVFNALIYGHSQANDM 175
LI YC+ GN+ A + E + + P ++ LI G + M
Sbjct: 326 SFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILP-DVFTYSILIKGLCGVDRM 384
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT 235
A+G+L M + G P+A TY L+ GY K G+M+
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME------------------------ 420
Query: 236 NLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV 295
A + + M++ G+EP+ T++ L+ GY K G M++ L + ++
Sbjct: 421 -----------KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE---MVI 466
Query: 296 NGDYLDIIHALA-VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMC 354
G D++ A + GH + + A H M +AGL P+ T + L+
Sbjct: 467 KGLLPDVVAYTALIDGHFKDGNTKEAFR------LH----KEMQEAGLHPNVFTLSCLID 516
Query: 355 GYAKHGDM-DSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEY 396
G K G + D+I+ LA+ G+ ++ +L H Y
Sbjct: 517 GLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMY 559
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 135/335 (40%), Gaps = 37/335 (11%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL-EFMRDKTFPISEGVFNALIYGH 169
++G PN VTY LI C+ G+ A ++ E + K FP + ++ LI G
Sbjct: 186 ARGASPNVVTYGTLIDGC------CRQGDFLKAFRLFDEMIEKKIFP-TVVIYTILIRGL 238
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC 229
+ ++ AE + M +G+ P+ TY +M GY K + + L
Sbjct: 239 CGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNV 298
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+F + + + +M SA L M+ G+ P+ Y L+ GY K G++ L ++
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE 358
Query: 290 SGSSLVNGDYLDIIHALAVSGHG--EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
+ D +++ + G + ++E ++ M + G P+A
Sbjct: 359 IEKHEILPDVF--TYSILIKGLCGVDRMEEADGLL------------QEMKKKGFLPNAV 404
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGH-----GEYIDE 399
TY L+ GY K G+M+ + +Q + + + +I +G G Y +
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 400 IISKIQPG-VGYSADAANHIYHLINKGQIDAAYRI 433
+I + P V Y+A H G A+R+
Sbjct: 465 VIKGLLPDVVAYTALIDGH----FKDGNTKEAFRL 495
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 12/211 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C++G ++
Sbjct: 209 DVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTF------TTLIDGHCKNGRVD 262
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 263 LAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 322
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS--AEGILTMMSQA 258
G K GD+++ + + +K L T L+ + + S AE +L M
Sbjct: 323 DGSCKEGDLETAFEYRXRMIKENIRL---DDVAYTALISGLCQEGRSVDAEKMLREMLSV 379
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
GL+P TYT ++ + K GD+ + +L+ +
Sbjct: 380 GLKPEIGTYTMIINEFCKKGDVWTGSKLMKE 410
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 129/307 (42%), Gaps = 43/307 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS ++ LM GY K GD++
Sbjct: 136 YPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXF 195
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M + M GL P+ T+T L+
Sbjct: 196 RLKKAMQASGVQPDVY-TYSVLINGL--CKESKMDDXNELFDEMLDXGLVPNGVTFTTLI 252
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 253 DGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDE------- 305
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+++ R + + L + Y
Sbjct: 306 ------------MSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAY 353
Query: 382 LDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
+I L G + + E++S ++P +G N KG + +++
Sbjct: 354 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLMKE 410
Query: 437 LARSANI 443
+ R +
Sbjct: 411 MQRDGYV 417
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 119/302 (39%), Gaps = 30/302 (9%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + G+ P+ V++ L++ Y
Sbjct: 133 ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNG------YI 186
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G++ ++ + M+ ++ LI G + + M + M GL P+
Sbjct: 187 KLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGV 246
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGIL 252
T+T L+ G+ K+G +D + QS L N LI D+ A+ ++
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEIYKQMLSQS---LSPDLVTYNTLIYGLCKKGDLKQAQDLI 303
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVS 309
MS GL+P TYT L+ G K GD+++ R + + L + Y +I L
Sbjct: 304 DEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQE 363
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G +D + M GL+P TYT ++ + K GD+ + +L+
Sbjct: 364 GRS--VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLM 408
Query: 370 AQ 371
+
Sbjct: 409 KE 410
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 95/467 (20%), Positives = 172/467 (36%), Gaps = 93/467 (19%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI--------- 125
G+ + D YN +L D L ++S+G+ PNR TY L+
Sbjct: 235 GKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWL 294
Query: 126 --------------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
+ + LI+ C +G IE A K+ + M + +N L
Sbjct: 295 KEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTL 354
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I G + + ++ A +L MS+ G++P+A T+ ++ Y K G MD
Sbjct: 355 INGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMD-------------- 400
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
A +T M ++G P TY L+ GY K G+M R
Sbjct: 401 ---------------------DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFR 439
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ + G + D + + L + ++E ++ + G
Sbjct: 440 TMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL------------SSARKRGYFID 487
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV---NGDYLDIIHALAVSGHGEY-IDEII 401
+Y L+ GY K G++D +L + + Y II L G E I ++
Sbjct: 488 EVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLN 547
Query: 402 SKIQPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLARSA--------NINGEQLPVGG 452
++ G+ N I H +G ++ A++ N + ++ NI L + G
Sbjct: 548 ELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEG 607
Query: 453 FLVRHMVKTNQ-PGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 495
L + + N G + D + I L +G++D A+ +++ +
Sbjct: 608 VLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEM 654
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 143/370 (38%), Gaps = 72/370 (19%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+L + +++ +N ++ Y +FL + P+ VTY ++ C
Sbjct: 201 KLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT------LC 254
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G + A +L M+ + + +N L+YG+ + + A ++ +M+Q L P
Sbjct: 255 KKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVW 314
Query: 196 TYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAE 249
TY L+ G G ++ ++ ++ +LK ++ S+ N LI L S ++ A
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDV---VSY---NTLINGCLEWSKISEAF 368
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+L MS+ G++P+A T+ ++ Y K G MD + +
Sbjct: 369 KLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITK-------------------- 408
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
M ++G P TY L+ GY K G+M R +
Sbjct: 409 ---------------------------MEESGFSPDCVTYNTLINGYCKAGNMGEAFRTM 441
Query: 370 AQNGSSLVNGDYL---DIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLIN 423
+ G + D + I+ L E +++S + GY D ++ I
Sbjct: 442 DEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR-GYFIDEVSYGTLIVGYFK 500
Query: 424 KGQIDAAYRI 433
G +D A ++
Sbjct: 501 DGNVDRALKL 510
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 99/248 (39%), Gaps = 25/248 (10%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
G ++ +D N +LR + L+ +G + V+Y LI Y
Sbjct: 445 GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVG------Y 498
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+DGN++ A K+ + M++K S +N +I G Q A L + ++GL P
Sbjct: 499 FKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558
Query: 195 QTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL---ILVSSDMA 246
TY ++ GY + GD++ K S KP ++F C N+L + + +
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKP--DVFTC------NILLRGLCMEGVLE 610
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDII 303
A + G TY L+ K G +D LL++ + D Y II
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAII 670
Query: 304 HALAVSGH 311
AL SG
Sbjct: 671 TALTDSGR 678
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + +M A+ + +++ GL PS ++ LM GY + GD+D
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKSAMHASGVQPDVY-TYSVLINGL--CKESKMDEANELFNEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
MS L+P TYT L+ G K GD+++ R+ + + L + Y
Sbjct: 302 ------------MSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ + VG D + I KG + +++ +
Sbjct: 350 TALISGLCQEGRSVDAEKMLRGMLS-VGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMX 408
Query: 439 RSANI 443
R ++
Sbjct: 409 RDGHV 413
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 12/211 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDG------HCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + + + F +N LI+G + D+ A ++ MS L+P TYT L+
Sbjct: 259 LAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS--AEGILTMMSQA 258
G K GD+++ + + +K L T L+ + + S AE +L M
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRL---DDVAYTALISGLCQEGRSVDAEKMLRGMLSV 375
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
GL+P TYT ++ + K GD+ + +LL +
Sbjct: 376 GLKPDNGTYTMIINEFCKKGDVKTGSKLLKE 406
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 126/305 (41%), Gaps = 36/305 (11%)
Query: 76 ELDVPLDISHYNALL-RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
E P + +N L+ R + E + + F A + G+ P+ V++ L+S Y
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEMRLAQSVFDA-ITKWGLRPSVVSFNTLMSG------Y 181
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G+++ ++ M ++ LI G + + M A + M GL P+
Sbjct: 182 IRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNG 241
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV-----SSDMASAE 249
T+T L+ G+ K+G +D L Q FS L L+ D+ A
Sbjct: 242 VTFTTLIDGHCKNGRVDLAMEIYKQLLSQG-----FSPDLITYNTLIFGLCKKGDLKQAR 296
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHAL 306
++ MS L+P TYT L+ G K GD+++ R+ + + L + Y +I L
Sbjct: 297 DLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGL 356
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G +++ L G M GL+P TYT ++ + K GD+ +
Sbjct: 357 CQEGRSVDAEKM-------------LRG--MLSVGLKPDNGTYTMIINEFCKKGDVKTGS 401
Query: 367 RLLAQ 371
+LL +
Sbjct: 402 KLLKE 406
>gi|297733858|emb|CBI15105.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 143/333 (42%), Gaps = 47/333 (14%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ DI YN LL + GI P+ TY S L+ + +
Sbjct: 6 IQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTY------SYLVETFGKLN 59
Query: 139 NIEGATKILEFMRDK-TFP-ISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+E +++L+ M +FP I+ +N L+ H+Q+ + A G+ M AG P+A T
Sbjct: 60 RLEKVSELLKEMESGGSFPDITS--YNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAAT 117
Query: 197 YTKLMCGYAKHGDMDSIK-----TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
Y+ L+ Y +HG D ++ K+ + +P + + N+LI V + + +
Sbjct: 118 YSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATY--------NILINVFGEGGYFKEV 169
Query: 252 LTM---MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHA 305
+T+ M + +EP+ +TY L+ K G + +++L + G + Y +I A
Sbjct: 170 VTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEA 229
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG---DM 362
G +E A+V F M++ G +P+ +TY L+ +AK G +
Sbjct: 230 Y---GQAALYEE--ALVAF----------NTMNEVGSKPTVETYNSLIQMFAKGGLYKES 274
Query: 363 DSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGE 395
++I + Q+G + + +I A G E
Sbjct: 275 EAILLKMGQSGVARNRDTFNGVIEAFRQGGQFE 307
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 148/399 (37%), Gaps = 67/399 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI+ YN LL + + +++ G PN TY S L++ Y + G +
Sbjct: 79 DITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVPNAATY------SILLNLYGRHGRYD 132
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ M+ + +N LI + + M + +EP+ +TY L+
Sbjct: 133 DVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLI 192
Query: 202 --CGYAK-HGDMDSI------KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
CG H D I K +PS K + + + LV+
Sbjct: 193 FACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVA---------F 243
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
M++ G +P+ +TY L+ +AK G + +++ + QSG + + +I A
Sbjct: 244 NTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQG 303
Query: 310 GHGE-------------------YIDEVSAIVCFVNICFHWLEGPMMSQA-GLEPSAQTY 349
G E ++ V ++ CF + E +A G+ PS Y
Sbjct: 304 GQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCY 363
Query: 350 TKLMCGYAKHGDMDSIRRLLAQNGSS-----------LVNGDYLDIIHALAVSGHGEYID 398
++ YAK D +LL + ++ ++ GDY D + V EY+
Sbjct: 364 CMMLAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDDDSNWQMV----EYVF 419
Query: 399 EIISK--IQPGVGYSADAANHIYHLINKGQIDAAYRIVN 435
E + GV + ++ L GQ + A R++N
Sbjct: 420 EKLKSEGCSLGVRFYNTLLEALWWL---GQKERATRVLN 455
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 153/385 (39%), Gaps = 43/385 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ D+ +N ++ H + ++E++GI PN VTY S LIS C G
Sbjct: 180 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY------SSLISCLCSYG 233
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
A+++L M +K + FNALI + AE + M + ++P TY
Sbjct: 234 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 293
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF-SFQLTNLLI---LVSSDMASAEGILTM 254
L+ G+ H +D K + + CF N LI S + +
Sbjct: 294 SLINGFCMHDRLDKAKQMFEFMVSKD----CFPDLDTYNTLIKGFCKSKRVEDGTELFRE 349
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
MS GL TYT L+ G GD D+ +++ Q S V D Y ++ L +G
Sbjct: 350 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 409
Query: 312 GEYIDEV------SAIVCFVNICFHWLEGPM--------------MSQAGLEPSAQTYTK 351
E EV S I + I +EG +S G++P+ TY
Sbjct: 410 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 469
Query: 352 LMCGYAKHGDMDSIRRLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGV 408
++ G + LL ++G +G Y +I A G E+I +++
Sbjct: 470 MISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS-C 528
Query: 409 GYSADAAN--HIYHLINKGQIDAAY 431
+ DA+ + ++++ G++D ++
Sbjct: 529 RFVGDASTIGLVANMLHDGRLDKSF 553
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 117/270 (43%), Gaps = 28/270 (10%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L K+ G EP+ VT S L++ YC I A +++ M + + F
Sbjct: 66 LLGKMMKLGYEPSIVTL------SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 119
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLK 221
LI+G N + A ++ M Q G +P+ TY ++ G K GD+D ++ K+ + K
Sbjct: 120 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 179
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
++++ + F+ + +L D A + M G+ P+ TY+ L+ +G
Sbjct: 180 IEADVVI-FNTIIDSLCKYRHVD--DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 236
Query: 282 SVRRLLAQSGSSLVNGDYLDIIHAL--AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+LL+ +N + L +AL A G++++ L M+ +
Sbjct: 237 DASQLLSDMIEKKINPN-LVTFNALIDAFVKEGKFVEA------------EKLHDDMIKR 283
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ ++P TY L+ G+ H +D +++
Sbjct: 284 S-IDPDIFTYNSLINGFCMHDRLDKAKQMF 312
Score = 43.5 bits (101), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 23/208 (11%)
Query: 162 FNALIYGHSQAN--DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS 219
FN L+ ++ D+ + +L M + G EPS T + L+ GY HG I +
Sbjct: 45 FNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYC-HG--KRISDAVAL 101
Query: 220 LKPQSEL-FLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
+ E+ + + T L+ + + + + A ++ M Q G +P+ TY ++ G K
Sbjct: 102 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 161
Query: 277 HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM 336
GD+D LL + ++ + D +I + +Y A+ F
Sbjct: 162 RGDIDLAFNLLNKMEAAKIEADV--VIFNTIIDSLCKYRHVDDALNLFKE---------- 209
Query: 337 MSQAGLEPSAQTYTKL---MCGYAKHGD 361
M G+ P+ TY+ L +C Y + D
Sbjct: 210 METKGIRPNVVTYSSLISCLCSYGRWSD 237
>gi|255660894|gb|ACU25616.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 481
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETXNRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ + K G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVL 314
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETXNRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 72/385 (18%), Positives = 147/385 (38%), Gaps = 39/385 (10%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETXNRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G++D+
Sbjct: 264 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAAD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I G + +D++I K ++P + + +
Sbjct: 313 VLKAMIRLSVPTEAGHYGVLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A TL R G Q P L+R + P D+A
Sbjct: 373 NPXIEYLCNNGQAXKA----ETLVRQLXKLGVQDPTALNTLIRGXSQEGSP------DSA 422
Query: 474 NHIYHLINKGQIDAAYRIVNTLARS 498
+ ++ + ++D+ N+L +S
Sbjct: 423 FELLKIMLRRKVDSEKSAYNSLVQS 447
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 71.2 bits (173), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 39/304 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD--- 211
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD++
Sbjct: 132 YPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGF 191
Query: 212 SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 KLKSAMHASGVQPDVYT-YSVLINGL--CKESKMDDANELFEEMLVKGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSG----HGEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I+ L G + +DE
Sbjct: 249 DGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+D+ R+ + Q L + Y
Sbjct: 302 ------------MSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAY 349
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ G D + I KG + +++ +
Sbjct: 350 TALISGLCQEGRSVDAEKMMREMLS-FGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 408
Query: 439 RSAN 442
R +
Sbjct: 409 RDGH 412
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + M ++ +N LIYG + + A ++ MS GL+P TYT L+
Sbjct: 259 LAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE ++ M GL+
Sbjct: 319 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLK 378
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ + K GD+ +LL +
Sbjct: 379 PDTGTYTMIINEFCKKGDVWKGSKLLKE 406
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 116/299 (38%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + G+ P+ V+Y L++ Y
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G++ K+ M ++ LI G + + M A + M GL P+
Sbjct: 183 RLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS L ++ + + A ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+D+ R+ + Q L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ +LL +
Sbjct: 363 --VDAEKMM-------------REMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKE 406
>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 574
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 16/211 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ +N L+ Y + + ++ QGI N VTY L+S C++G +E
Sbjct: 260 DVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSG------LCREGKVE 313
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ K++E M + N+++ G + M AEG + ++Q G++P+ TY L+
Sbjct: 314 DSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLV 373
Query: 202 CGYAK-----HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
GY + + P + + C T S D S G+L M
Sbjct: 374 DGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTT-----SRDWRSVSGLLDEMK 428
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ G++ TY L+ G++ +LL
Sbjct: 429 EKGVKADVVTYNVLIGALCCKGEVRKAVKLL 459
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 21/203 (10%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
FN +I G + + A + +S G+ PS TY L+ GY K G + + LK
Sbjct: 191 FNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLK 250
Query: 222 PQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ + N+LI ++ +A + M Q G+ + TY L+ G + G
Sbjct: 251 EMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREG 310
Query: 279 DM-DSVRRL--LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
+ DS++ + + + G + + +++ G + E W++G
Sbjct: 311 KVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKG---MMVEAEG----------WVDG- 356
Query: 336 MMSQAGLEPSAQTYTKLMCGYAK 358
++Q G++P+ TY L+ GY +
Sbjct: 357 -IAQRGMKPNVITYNTLVDGYRR 378
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 6/130 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+ + + S + L +++ +G++ + VTY LI C G +
Sbjct: 400 NVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIG------ALCCKGEVR 453
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+L+ M + +N +I G + D A I M + + TY +
Sbjct: 454 KAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFL 513
Query: 202 CGYAKHGDMD 211
+ K G MD
Sbjct: 514 KYFCKMGKMD 523
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 6/138 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E V D+ YN L+ L ++ G+EP V Y +I+ +C
Sbjct: 429 EKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIING------FC 482
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+ +GA +I M + + +N + + M A +L M + GL P+
Sbjct: 483 EKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRI 542
Query: 196 TYTKLMCGYAKHGDMDSI 213
TY + G + G + I
Sbjct: 543 TYEIINSGMIEKGYVPDI 560
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/235 (18%), Positives = 88/235 (37%), Gaps = 35/235 (14%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK------ 129
EL + +S N++L + ++ + +G++PN +TY L+ +
Sbjct: 324 ELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMK 383
Query: 130 -----------------------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
LI+ + + + +L+ M++K +N LI
Sbjct: 384 EAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLI 443
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQ 223
++ A +L M + GLEP Y ++ G+ + GD I+ ++ K +
Sbjct: 444 GALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKR 503
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ + ++ + M A +L M + GL P+ TY + G + G
Sbjct: 504 ANV---VTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKG 555
>gi|357481229|ref|XP_003610900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512235|gb|AES93858.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1508
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 124/306 (40%), Gaps = 34/306 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG-AT 144
YNA++ VY N + + + +G EP+ V++ LI N+K+ K C + G A
Sbjct: 267 YNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLI-NAKV--KSC--ATVSGLAI 321
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM--- 201
++L+ + +N LI S+ +++ A G+ + M +P TY ++
Sbjct: 322 ELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVY 381
Query: 202 --CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MS 256
CG+A + K K P + + N L+ S + E + + M
Sbjct: 382 GRCGFALKAEHLFEKLKSNGFSPDAVTY--------NSLLYAFSKEGNTEKVRDISEEMV 433
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
+ G TY ++ Y KHG D RL SS N D + + + G I+
Sbjct: 434 KMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIE 493
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
E S ++ M AG++P+ TY+ L+C YAK G + S
Sbjct: 494 EASKVM------------SEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESG 541
Query: 377 VNGDYL 382
+ D+L
Sbjct: 542 IKADHL 547
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 6/206 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L+ +Y + + K++S G+EP R TY+ +I+ Y Q
Sbjct: 998 DEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQ----- 1052
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ E +R + + ++ ++ + + D AE +L +M +AG+EP+ T LM
Sbjct: 1053 -AEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLM 1111
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
Y K G + + +L+ + + L D + LT M +A +E
Sbjct: 1112 VSYGKSGQPEEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAIE 1171
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL 287
P + +T + + G+++ LL
Sbjct: 1172 PDHRIWTCFIRAASLSGEVNDANNLL 1197
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 91/226 (40%), Gaps = 6/226 (2%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
G+ + DI YN L+ + + +ES +P+ TY + +IS Y
Sbjct: 328 GKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTY------NAMISVY 381
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G A + E ++ F +N+L+Y S+ + I M + G
Sbjct: 382 GRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDE 441
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY ++ Y KHG D +K ++ + L+ +S + A +++
Sbjct: 442 MTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSE 501
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL 300
M AG++P+ TY+ L+C YAK G + S + D+L
Sbjct: 502 MLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHL 547
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 53/247 (21%)
Query: 82 DISHYNALLRVY------LDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
D+ YNA++ VY L EH F KL+S G P+ VTY + L+ +
Sbjct: 370 DLWTYNAMISVYGRCGFALKAEHLFE------KLKSNGFSPDAVTY------NSLLYAFS 417
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALI--YG----HSQA----NDMAS-------- 177
++GN E I E M F E +N +I YG H +A DM S
Sbjct: 418 KEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAV 477
Query: 178 -----------------AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
A +++ M AG++P+ TY+ L+C YAK G + +
Sbjct: 478 TYTVLIDLLGKASKIEEASKVMSEMLDAGVKPTLHTYSALICAYAKVGRRVEAEETFNRM 537
Query: 221 KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
+ ++ + L +++ A + M +AG P Y ++ +
Sbjct: 538 RESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVMLPALVRENMG 597
Query: 281 DSVRRLL 287
D + R++
Sbjct: 598 DVIERVV 604
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 127/329 (38%), Gaps = 51/329 (15%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++ + Q GN+ K+ M+ + + ++ +I + + +L+ M +AG
Sbjct: 900 MLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRDVRVMLSEMGEAG 959
Query: 190 LEPSAQTYT---KLMCGYAKHGDMDSIKTKI--PSLKPQSELFLCFSFQLTNLLILVSSD 244
+P Q + KL + +M I I L P E + L+ + D
Sbjct: 960 FKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETY-------NTLITMYCRD 1012
Query: 245 MASAEGILTM--MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDY 299
EG+ M M GLEP TY ++ ++K D L L +G L Y
Sbjct: 1013 HRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFY 1072
Query: 300 LDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
++ SG + + + I M +AG+EP+ T LM Y K
Sbjct: 1073 HLMMKMYRTSGDHQKAENLLEI---------------MKEAGIEPNTATMHLLMVSYGKS 1117
Query: 360 GDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIY 419
G + R+L +N ++ G LD + +V ID + K DA I
Sbjct: 1118 GQPEEADRIL-KNLRTM--GAVLDTLPYSSV------IDAYLKK--------GDAKAGIE 1160
Query: 420 HL--INKGQIDAAYRIVNTLARSANINGE 446
L + + I+ +RI R+A+++GE
Sbjct: 1161 KLTEMKEAAIEPDHRIWTCFIRAASLSGE 1189
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 85/417 (20%), Positives = 159/417 (38%), Gaps = 64/417 (15%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + + A I+E +R + + V+NALI+ ++ + A I M + G
Sbjct: 795 IIETYGKLKMWQSAESIVENLRQRCSKMDRKVWNALIHAYAFSGCYERARAIFNTMMREG 854
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS-----D 244
P+ ++ L+ G + + I L+ +++L+++ + +
Sbjct: 855 PSPTVESVNGLLQALIVDGRLSELYVVIQELQDMD-----LKISKSSILLMLEAFAQAGN 909
Query: 245 MASAEGILTMMSQAGLEPSAQTY---TKLMCGYAKHGDMDSVRRLLAQSG---------- 291
+ + + M AG P+ Y L+C + + D VR +L++ G
Sbjct: 910 LFEVQKVYNGMKAAGYFPTMHLYRLMIGLLCRFKRVRD---VRVMLSEMGEAGFKPDLQI 966
Query: 292 --------SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICF-HWLEGPM-----M 337
SS+ + +I+ + + G DE + C H E + M
Sbjct: 967 FNSVLKLYSSIEEFQNMGVIYQM-IQDAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKM 1025
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHG 394
GLEP TY ++ ++K D L L NG L Y ++ SG
Sbjct: 1026 KSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDH 1085
Query: 395 EYIDEIISKIQPGVGYSADAANHIYHLI-----NKGQIDAAYRIVNTLARSANINGEQLP 449
+ + ++ +I G + A HL+ GQ + A RI+ L R+ + LP
Sbjct: 1086 QKAENLL-EIMKEAGIEPNTAT--MHLLMVSYGKSGQPEEADRILKNL-RTMGAVLDTLP 1141
Query: 450 VGGFLVRHMVKTNQPGVGYSADAANHIYHL--INKGQIDAAYRIVNTLARSANINGE 504
+ ++ K DA I L + + I+ +RI R+A+++GE
Sbjct: 1142 YSSVIDAYLKK---------GDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGE 1189
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 119/318 (37%), Gaps = 34/318 (10%)
Query: 100 FSPTDFLAKLESQGIEPNR--------VTYQQLI-SNSKLISKYCQ---DGNIEGATKIL 147
F+PTDF ++S G + +T QQ +N+++++ N EG +
Sbjct: 193 FTPTDFCFVVKSVGQSSWQRALELYECLTMQQWYATNARMVATILSVLGKANQEGIAVEI 252
Query: 148 EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 207
+ + V+NA++ +++ + + +M + G EP ++ L+ K
Sbjct: 253 FAKAESVIADTVQVYNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKS 312
Query: 208 GDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQAGLEPSA 264
S I L + L N LI S++ A G+ + M +P
Sbjct: 313 CATVS-GLAIELLDEVGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDL 371
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAI 321
TY ++ Y + G L + S+ + D Y +++A + G+ E + ++S
Sbjct: 372 WTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDIS-- 429
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDY 381
M + G TY ++ Y KHG D RL SS N D
Sbjct: 430 -------------EEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDA 476
Query: 382 LDIIHALAVSGHGEYIDE 399
+ + + G I+E
Sbjct: 477 VTYTVLIDLLGKASKIEE 494
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 66/141 (46%), Gaps = 6/141 (4%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD S Y+ ++++Y + + L ++ GIEPN T L+ + Y + G
Sbjct: 1067 LDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLMVS------YGKSGQP 1120
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A +IL+ +R + ++++I + + D + LT M +A +EP + +T
Sbjct: 1121 EEADRILKNLRTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCF 1180
Query: 201 MCGYAKHGDMDSIKTKIPSLK 221
+ + G+++ + +L+
Sbjct: 1181 IRAASLSGEVNDANNLLNALQ 1201
>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 476
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 100 ELGVERTIKSYNALFKVILRRGRYMMGKRYFNKMLSEGIEPTRHTFNVMIWG------FF 153
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 154 LSGKVETAIRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 213
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + + KP + + L N + M+ A
Sbjct: 214 TYTTLIKGYVSVDQVDDALRLVEEMKGFGTKPNAITYSTLLPGLCN-----AEKMSEARV 268
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ + K G++D+ +L
Sbjct: 269 ILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVL 306
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 82/435 (18%), Positives = 166/435 (38%), Gaps = 56/435 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + + M G
Sbjct: 78 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMGKRYFNKMLSEG 137
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 138 IEPTRHTFNVMIWGFFLSGKVETAIRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 195
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + L
Sbjct: 196 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGTKPNAITYSTLLP 255
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G++D+
Sbjct: 256 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAAD 304
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I +G + +D++I K ++P + + H
Sbjct: 305 VLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIMLRPQSTLHLEPSAH 364
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A TL R G Q P L+R G+S +
Sbjct: 365 NPMIEYLCNNGQASKA----ETLVRQLMKLGVQDPTALNTLIR----------GHSQE-- 408
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRL 533
G D+A+ ++ + R ++ E+ LV+ +K N+P D A+ +
Sbjct: 409 ---------GSPDSAFELLKIMLRR-KVDSEKSAYNS-LVQSYLKKNEPXDAKAALDSMI 457
Query: 534 TDENLHPRAFNLAVL 548
+++L A +V+
Sbjct: 458 ENDHLPDSALFRSVM 472
Score = 43.1 bits (100), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 80/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 49 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 105
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL + M G+EP+ T+ ++ G+ G +++ R
Sbjct: 106 TIKSYNALFKVILRRGRYMMGKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAIRFF 165
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 166 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 213
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 214 TYTTLIKGYVSVDQVDDALRLVEE 237
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 141/342 (41%), Gaps = 52/342 (15%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K++ G+ PN TY +++ + C+DG + A K+ + MR++ + +N LI
Sbjct: 258 KMQEHGVFPNLHTYNCVMN------QLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM---CGYAKHGDMDSIKTKIPS--LKP 222
G + A ++ M G+ P+ TY L+ CG K G S+ + S L P
Sbjct: 312 GLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSP 371
Query: 223 QSELFLCFSFQLTNLLILVS-----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
L ILVS D + A ++ M + G++PS TYT L+ +A+
Sbjct: 372 ----------SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 278 GDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
+M+ +R + + G + Y +IH + G ++E S +
Sbjct: 422 DNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGR---MNEASRLF------------ 466
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN---GDYLDIIHALAVS 391
M + EP+ Y ++ GY K G RL + + Y +I L
Sbjct: 467 KSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKE 526
Query: 392 GHGEYIDEIISK-IQPGVGYSADAANHIYHLINKGQIDAAYR 432
+ + ++ K I G+G ++ I +LI++ + D+ R
Sbjct: 527 RKSKEAEGLVEKMIDSGIG----PSDSILNLISRAKNDSHSR 564
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 14/228 (6%)
Query: 67 EDPFSV--HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL 124
+D F V E V +I YN L+ + + +++S GI PN +TY L
Sbjct: 285 KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTL 344
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
I +C + A + ++ + S +N L+ G + D + A ++
Sbjct: 345 IDG------FCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKE 398
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LV 241
M + G++PS TYT L+ +A+ D+++ I EL L ++LI +
Sbjct: 399 MEERGIKPSKVTYTILIDTFARS---DNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
M A + M + EP+ Y ++ GY K G RL +
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFRE 503
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 122/330 (36%), Gaps = 39/330 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
++ V LD+ + +++ + D L +L G PN V Y LI C
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGC------C 209
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G IE A + M +E + LI+G + + M + G+ P+
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLH 269
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG--ILT 253
TY +M K G ++ + C L+ + +M + E ++
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERG--VSCNIVTYNTLIGGLCREMKANEANEVMD 327
Query: 254 MMSQAGLEPSAQTYTKLM---CGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA--- 307
M G+ P+ TY L+ CG K G S+ R L G S Y ++
Sbjct: 328 QMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKG 387
Query: 308 -VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 364
SG G+ + E M + G++PS TYT L+ +A+ +M+
Sbjct: 388 DTSGAGKVVKE-------------------MEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Query: 365 -IRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
+R + + G + Y +IH + G
Sbjct: 429 QLRSSMEELGLTPDVHTYSVLIHGFCIKGR 458
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 127/320 (39%), Gaps = 29/320 (9%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I C+ G IE + +L +R+ F + ++ LI G + ++ A+ + M + G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS-----IKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
L + TYT L+ G K+G K + + P + C QL
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCK-----DGR 283
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
A + M + G+ + TY L+ G + + ++ Q S +N + I +
Sbjct: 284 TKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNL--ITY 341
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD- 363
+ G V + +++C + GL PS TY L+ G+ K GD
Sbjct: 342 NTLIDG----FCGVRKLGKALSLCRD------LKSRGLSPSLVTYNILVSGFCKKGDTSG 391
Query: 364 --SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---I 418
+ + + + G Y +I A S + E ++ S ++ +G + D + I
Sbjct: 392 AGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEE-LGLTPDVHTYSVLI 450
Query: 419 YHLINKGQIDAAYRIVNTLA 438
+ KG+++ A R+ ++
Sbjct: 451 HGFCIKGRMNEASRLFKSMV 470
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 41/303 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+ S YN L+R Y T L + P VTY +I YC G+ +
Sbjct: 434 NTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKG------YCDSGDTD 487
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++LE M+ E + LI G + + M A G+ M GL P+ TYT L+
Sbjct: 488 VAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALI 547
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCF-SFQLTNLLI---LVSSDMASAEGILTMMSQ 257
GY K +D + +K C + Q N+LI ++ + AE + +M +
Sbjct: 548 SGYCKDEKLDCAARMLERMKRSG----CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLE 603
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSG---- 310
+ P TY+ ++ G +G + + + + G Y +I AL G
Sbjct: 604 EKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEE 663
Query: 311 ----------HGEYIDEVSAI----VCF----VNICFHWLEGPMMSQAGLEPSAQTYTKL 352
G DEV+ + VC V+ F +L G M++ AG +P+ QTY L
Sbjct: 664 AEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFL-GEMIN-AGCQPTLQTYDVL 721
Query: 353 MCG 355
+ G
Sbjct: 722 IKG 724
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 108/258 (41%), Gaps = 21/258 (8%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G++PN + Y + +I+ C+DGN+ A I+ + + ++I G+ +
Sbjct: 222 EGLQPNLLIY------NSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCR 275
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
D+ SA I M + G EP+A TY+ L+ G G ++ I + L +
Sbjct: 276 NRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHT 335
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
F + + + A I M + G +P+ TYT L+ G + +++ G
Sbjct: 336 FTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDG 395
Query: 292 SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
Y +++ L E ++ SA++ F MM + G P+ +Y +
Sbjct: 396 VVPNTVTYNALMNVLM-----ENMEIDSALIVF----------NMMGKHGCLPNTSSYNE 440
Query: 352 LMCGYAKHGDMDSIRRLL 369
L+ GY GD + +L
Sbjct: 441 LIRGYCTIGDTEKAMSML 458
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 150/392 (38%), Gaps = 49/392 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y +++ Y N S + +++ +G EPN TY S LI+ C G +
Sbjct: 262 DTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATY------STLINGLCNSGRVN 315
Query: 142 GATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A + E R P F A I + A I M + G +P+ TYT L
Sbjct: 316 EALDFISEMTRHGVLPTVH-TFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSL 374
Query: 201 MCGYAKHGDMDSIKTKIP--SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
+ G + ++ + P + + L N+L + + ++ SA + MM +
Sbjct: 375 ISGQRVSRMAIGLFHRMSRDGVVPNTVTY----NALMNVL-MENMEIDSALIVFNMMGKH 429
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLL-----AQSGSSLV-----------NGDYLDI 302
G P+ +Y +L+ GY GD + +L + +LV +GD
Sbjct: 430 GCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVA 489
Query: 303 IHALAV-SGHGEYIDEVS---AIVCFVNICFHWLEGPM---MSQAGLEPSAQTYTKLMCG 355
I L + +G DE S I F I L M M GL P+ TYT L+ G
Sbjct: 490 IRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISG 549
Query: 356 YAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIIS-----KIQPG 407
Y K +D R+L + S + Y +IH L + +E+ KI P
Sbjct: 550 YCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPD 609
Query: 408 VGYSADAANHIYHLINKGQIDAAYRIVNTLAR 439
V + N L N G I A + N + +
Sbjct: 610 VVTYSTVIN---GLCNNGAIPLALEMFNKMVK 638
>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
Length = 641
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 136/321 (42%), Gaps = 40/321 (12%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
G+ D + + +++ YN ++ + H + + + G +P+ VTY
Sbjct: 269 GDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTY 328
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
LIS S C+DG + A ++LE K ++ + LI+ + + A
Sbjct: 329 NTLISGS------CRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNW 382
Query: 182 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKI--PSLKPQSELF------LCF 230
L M++ G +P TY L+ G G++D +I+ K+ + P + ++ LC
Sbjct: 383 LIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCK 442
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
F+L +L++ M+ Q+ L P A Y L+ G+ ++G++D R+L +
Sbjct: 443 KFKLPAAKLLLAE----------MLDQSVL-PDAFVYATLVDGFIRNGNLDEARKLFELT 491
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYT 350
+N + + + G+ ++ A+ C M + L P TY+
Sbjct: 492 IEKGMNPGIVG--YNAMIKGYCKFGMMKDAMACINR----------MKKRHLAPDEFTYS 539
Query: 351 KLMCGYAKHGDMDSIRRLLAQ 371
++ GY K D+D +++ +
Sbjct: 540 TVIDGYVKQHDLDGAQKMFRE 560
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 114/285 (40%), Gaps = 37/285 (12%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
QG PN + Y LI YC+ G++E A + ++ K F + + A+I G +
Sbjct: 214 QGCIPNIIFYNTLIDG------YCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCK 267
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
D + + +L M+ GL + Q Y ++ KHG I + +++ E
Sbjct: 268 KGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHG---HIVKAVETIEGMIECGCKPD 324
Query: 232 FQLTNLLILVS---SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
N LI S ++ A+ +L GL P+ +YT L+ Y K G D L
Sbjct: 325 IVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLI 384
Query: 289 QSGSSLVNGD---YLDIIHALAVSG--------------HGEYIDEVSAIVCFVNICFHW 331
+ D Y ++H L V+G G + D + +C +
Sbjct: 385 EMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKF 444
Query: 332 -------LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
L M+ Q+ L P A Y L+ G+ ++G++D R+L
Sbjct: 445 KLPAAKLLLAEMLDQSVL-PDAFVYATLVDGFIRNGNLDEARKLF 488
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 131/314 (41%), Gaps = 29/314 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNA++ L +E + A++ + G+ P+ +TY +++ YC+ GN++ A
Sbjct: 352 YNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNG------YCKAGNLKEALW 405
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L +R + +N LI G+ + + A + M + G P TYT LM G
Sbjct: 406 LLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSH 465
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K ++ + + + CF++ L+ D A + +M G+ P
Sbjct: 466 KVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTV 525
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIV 322
TY ++ G K G++ + L + S + D Y +IHA G + E +
Sbjct: 526 TYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERG---LLSEARKL- 581
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS----IRRLLAQNGSSLVN 378
L G M GL+PS TYT L+ + G++ S R++L G
Sbjct: 582 ---------LNG--MVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKML-DVGIEPNE 629
Query: 379 GDYLDIIHALAVSG 392
Y +IHAL +G
Sbjct: 630 ITYNVLIHALCRTG 643
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 143/345 (41%), Gaps = 35/345 (10%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ--GIEPNRVTYQQLISNSKLISK 133
+L++ I YN LL +L + L ++E+Q G N VTY + +IS
Sbjct: 236 QLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTY------NVVISF 289
Query: 134 YCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPS 193
++G++E A K+++ MR + S +N LI + + E + M G+ P+
Sbjct: 290 LAREGHLENAAKLVDSMR-LSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPT 348
Query: 194 AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
TY ++ G K +++ + K ++ L ++ + ++ A +L
Sbjct: 349 LVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLG 408
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSG--------SSLVNGDYLDI 302
+ +AGL P+ TY L+ GY + G ++ RRL + + G + L+NG +
Sbjct: 409 DLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVR 468
Query: 303 IHALAVSGHGEYIDEVSAIVCF---VNICFHWLEG---------PMMSQAGLEPSAQTYT 350
+A E + + CF IC + G +M G+ P TY
Sbjct: 469 NLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYN 528
Query: 351 KLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSG 392
++ G K G++ + L + S + D Y +IHA G
Sbjct: 529 VIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERG 573
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 126/326 (38%), Gaps = 48/326 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN++L Y + L L G+ P +TY LI YC+ G +E
Sbjct: 383 DLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDG------YCRLGGLE 436
Query: 142 GATKILEFMRDK-TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A ++ E M ++ FP + L+ G + ++ A M GL+P Y
Sbjct: 437 EARRLKEEMVEQGCFP-DVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTR 495
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NLLI---LVSSDMASAEGILTMMS 256
+C GD K L+ L + +T N++I + ++ A+ + M
Sbjct: 496 ICAELILGDTH----KAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMV 551
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGH-- 311
GL+P TYT L+ + + G + R+LL G Y +IH G+
Sbjct: 552 SDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLY 611
Query: 312 ------------GEYIDEVSAIVCFVNIC---------FHWLEGPMMSQAGLEPSAQTYT 350
G +E++ V +C H+ E M + GL P+ TYT
Sbjct: 612 SAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHE---MLERGLAPNKYTYT 668
Query: 351 KLMCGYAKHGDMDSIRRL---LAQNG 373
L+ G + G+ RL + QNG
Sbjct: 669 LLIDGNCREGNWADAIRLYFEMHQNG 694
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 118/293 (40%), Gaps = 21/293 (7%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V + Y AL+ Y N + + L ++++ I P+ +TY +I+ C G
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVIN-------ACARG 224
Query: 139 NI--EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+ EG + MR + +N L+ + AE + M+ G+ P T
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y+ L+ + K ++ + + + L S+ + S + A G+ M
Sbjct: 285 YSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
AG P+A TY+ L+ + + G D VR+L + SS + D + V G G Y
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
EV + FH M + +EP +TY ++ K G + R++L
Sbjct: 405 EVVTL-------FH-----DMVEENIEPDMETYEGIIFACGKGGLHEDARKIL 445
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 117/291 (40%), Gaps = 54/291 (18%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN-D 174
P++ + + S + LI+ Y ++G E + ++L+ M++ S +N +I ++ D
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLD 227
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234
G+ M G++P TY L+ A G D
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDE---------------------- 265
Query: 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ--SGS 292
AE + M+ G+ P TY+ L+ + K ++ V LL++ SG
Sbjct: 266 -------------AEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGG 312
Query: 293 SLVN-GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
SL + Y ++ A A SG I E + FH M AG P+A TY+
Sbjct: 313 SLPDITSYNVLLEAYAKSGS---IKEAMGV-------FH-----QMQAAGCTPNANTYSV 357
Query: 352 LMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIIS 402
L+ + + G D +R+L + SS + D + V G G Y E+++
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 134/369 (36%), Gaps = 77/369 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI- 140
D + YN L+ V+ + + + + IEP+ TY+ +I C G +
Sbjct: 386 DAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF-------ACGKGGLH 438
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A KIL++M S + +I QA A M + G PS +TY L
Sbjct: 439 EDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETYHSL 498
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ +A+ G LV +E IL+ + +G+
Sbjct: 499 LYSFARGG-------------------------------LVK----ESEAILSRLVDSGI 523
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
+ T+ + Y + G + + S + D + L+V +DE
Sbjct: 524 PRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDE--- 580
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS----- 375
C E M + + PS Y ++ Y K D + LL + S+
Sbjct: 581 -------CREQFE--EMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNI 631
Query: 376 ------LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVG---YSADAANHIYHLINKGQ 426
++ GDY D + V EY+ + ++ G+G Y+A + ++ L GQ
Sbjct: 632 HQVIGQMIKGDYDDDSNWQIV----EYVLDKLNSEGCGLGIRFYNA-LLDALWWL---GQ 683
Query: 427 IDAAYRIVN 435
+ A R++N
Sbjct: 684 KERAARVLN 692
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 139/335 (41%), Gaps = 40/335 (11%)
Query: 86 YNALLRVYLDNEHTFSP-TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI-EGA 143
YN +L VY ++ + +++S GI P+ TY LIS C+ GN+ E A
Sbjct: 238 YNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLIS-------CCRRGNLYEEA 290
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+L+ M+ F + +NAL+ + ++ A +L M G PS TY L+
Sbjct: 291 AGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISA 350
Query: 204 YAKHG---DMDSIKTKI--PSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMM 255
YA+ G D +K ++ +KP F T LL D A+ + I M
Sbjct: 351 YARDGLLEDALELKNQMVEKGIKPD-------VFTYTTLLSGFEKAGKDKAAVQ-IFEEM 402
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
G +P+ T+ L+ + G + ++ + + D + L+V G
Sbjct: 403 RNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMD 462
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
EVS + M +AG P T+ L+ Y++ G D + + +
Sbjct: 463 SEVSGVF------------KEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEA 510
Query: 376 LVNGD---YLDIIHALAVSGHGEYIDEIISKIQPG 407
VN D Y ++ ALA G + ++++++++ G
Sbjct: 511 GVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDG 545
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 118/291 (40%), Gaps = 32/291 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YNALL VY + + + L ++E G P+ VTY + LIS Y +DG +E
Sbjct: 305 DKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTY------NSLISAYARDGLLE 358
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ M +K + L+ G +A +A I M G +P+ T+ L+
Sbjct: 359 DALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALI 418
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT--NLLILVSSDMASAE--GILTMMSQ 257
+ G + +K F C +T LL + + +E G+ M +
Sbjct: 419 KMHGNRGKFTEMMKVFEDIKT----FQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKR 474
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY 314
AG P T+ L+ Y++ G D + + + VN D Y ++ ALA G +
Sbjct: 475 AGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQ 534
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
++V A M +P+ TY L+ YA +++ +
Sbjct: 535 SEKVLA---------------EMKDGRCKPNELTYCSLLHAYANGKEIERM 570
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 117/314 (37%), Gaps = 59/314 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI +N LL V+ N + +++ G P R T+ LIS+ Y + G+ +
Sbjct: 445 DIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISS------YSRCGSFD 498
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M + +NA++ ++ +E +L M +P+ TY L+
Sbjct: 499 QAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLL 558
Query: 202 CGYAKHGDMDS-------------------------IKTKIPSLKPQSELFL-----CFS 231
YA +++ + +K L FL FS
Sbjct: 559 HAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFS 618
Query: 232 FQLTNLLILVS-----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+T L +VS +A A IL M + G PS TY LM Y++ + + +
Sbjct: 619 PDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEI 678
Query: 287 LAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
L + + + D Y +I+A +G + + S ++ M ++G
Sbjct: 679 LREILAKGIRPDIISYNTVIYAYCRNGR---MRDASRVL------------SEMRESGPA 723
Query: 344 PSAQTYTKLMCGYA 357
P TY + YA
Sbjct: 724 PDIITYNTFIASYA 737
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 103/254 (40%), Gaps = 30/254 (11%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P I YN+L+ Y + + ++ +GI+P+ TY + L+S + + G
Sbjct: 338 PPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTY------TTLLSGFEKAGK 391
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A +I E MR++ + FNALI H + + P T+
Sbjct: 392 DKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNT 451
Query: 200 LMCGYAKHGDMDS------IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS---AEG 250
L+ + ++G MDS + K P+ + F N LI S S A
Sbjct: 452 LLSVFGQNG-MDSEVSGVFKEMKRAGFVPERDTF--------NTLISSYSRCGSFDQAMA 502
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALA 307
+ M +AG+ P +Y ++ A+ G ++LA+ + Y ++HA A
Sbjct: 503 VYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYA 562
Query: 308 VSGHGEYIDEVSAI 321
+G+ I+ + A+
Sbjct: 563 ---NGKEIERMCAL 573
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 116/323 (35%), Gaps = 88/323 (27%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI---SNSKLIS 132
E V D+S YNA+L LA+++ +PN +TY L+ +N K I
Sbjct: 509 EAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIE 568
Query: 133 KYCQ------DGNIEGATKILEFM--------------------RDKTFPISEGVFNAL- 165
+ C G IE +L+ + R + F NA+
Sbjct: 569 RMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMV 628
Query: 166 -IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
IYG Q +A A IL M + G PS TY LM Y++
Sbjct: 629 SIYGRRQM--VAKANEILDCMKRGGFTPSLTTYNSLMYMYSR------------------ 668
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
S++ +E IL + G+ P +Y ++ Y ++G M
Sbjct: 669 -----------------SANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDAS 711
Query: 285 RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVN----ICFHWLEGPMMSQA 340
R+L++ S G DII + +I +A FV +C+ M +
Sbjct: 712 RVLSEMRES---GPAPDIIT------YNTFIASYAADSMFVEAIDVVCY-------MIKH 755
Query: 341 GLEPSAQTYTKLMCGYAKHGDMD 363
G +P+ TY ++ Y K D
Sbjct: 756 GCKPNQSTYNSIVDWYCKLNRRD 778
>gi|255660912|gb|ACU25625.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 481
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I Y+AL +V L + K+ S+GIEP R T+ LI +
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVLIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMXEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ K G +D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLITSQCKSGHLDAASDVL 314
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQG---IVQESVKLFDRMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + + L IL A+ M G+EP+ T+ L+ G+ G +++ R
Sbjct: 114 TIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMXEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 81/450 (18%), Positives = 162/450 (36%), Gaps = 86/450 (19%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G ++ + K+ + M + + ++AL + A+ M G
Sbjct: 86 MIDSYGKQGIVQESVKLFDRMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ L+ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMXE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ +
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEE------------------ 245
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
M G++P+A TY+ L+ G M R
Sbjct: 246 -----------------------------MKGFGIKPNAITYSTLLPGLCNAEKMSEARS 276
Query: 368 LLAQNGSSLV----NGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYH 420
+L + + N ++ +I + SGH + +++ K + +A ++ I +
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLITSQCKSGHLDAASDVL-KAMIRLSVPTEAGHYGVLIEN 335
Query: 421 LINKGQIDAAYRIVNTLARSANI----------------------NGEQLPVGGFLVRHM 458
GQ D A ++++ + I N Q LVR +
Sbjct: 336 FCKAGQYDQAVKLLDKVIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQL 395
Query: 459 VKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVK 518
+K GV I +G D+A+ ++ + R ++ E+ LV+ +K
Sbjct: 396 LKL---GVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRR-KVDSEKSAYDS-LVQSYLK 450
Query: 519 TNQPIDKVLAVCHRLTDENLHPRAFNLAVL 548
N+P D A+ + +++L A +V+
Sbjct: 451 KNEPADAKAALDSMIENDHLPDSALFRSVM 480
>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Cucumis sativus]
Length = 834
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 135/315 (42%), Gaps = 35/315 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ +++ YN ++ D L ++ EP+ VTY LI++ +C G
Sbjct: 309 LSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINH------FCSRG 362
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A K+LE + ++ + L++G+ + + A L MS +GLE +Y
Sbjct: 363 EVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYG 422
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G G++D+ T + + L + + + ++ A+ +LT M
Sbjct: 423 ALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQ 482
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRR---LLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
+ P A Y L+ G+ +HG++D ++ L+ + G Y +I + SG +
Sbjct: 483 NIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMD-- 540
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA----Q 371
+AI+C M +A P T++ ++ GY K +M+++ ++ Q
Sbjct: 541 ---NAILCI----------DKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQ 587
Query: 372 NG-------SSLVNG 379
N +SL+NG
Sbjct: 588 NCKPNVVTYTSLING 602
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 146/380 (38%), Gaps = 79/380 (20%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP +I YN L+ Y S KL+ +G P T+ L++ +C+ G
Sbjct: 240 VP-NIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNG------FCKMG 292
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
E +L M+D+ ++ ++N +I + A+ L MS+ EP TY
Sbjct: 293 MFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYN 352
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ + G+++ AE +L +
Sbjct: 353 TLINHFCSRGEVE-----------------------------------EAEKLLEQTIRR 377
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
GL P+ TYT L+ GY K G+ L + +S + D Y +IH L V+G +
Sbjct: 378 GLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGE---V 434
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
D I MM++ G+ P A Y LM G K G + + +L +
Sbjct: 435 DTALTI-----------RDRMMNR-GILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQ 482
Query: 376 LVNGDYLDIIHALAVSG---HGEYIDE-------IISK-IQPG-VGYSADAANHIYHLIN 423
+ D ++A V G HG +DE II K + PG VGY+ I
Sbjct: 483 NIAPDAF--VYATLVDGFIRHGN-LDEAKKLFQLIIEKGLDPGVVGYNV----MIKGFSK 535
Query: 424 KGQIDAAYRIVNTLARSANI 443
G +D A ++ + R+ ++
Sbjct: 536 SGMMDNAILCIDKMRRAHHV 555
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 100/469 (21%), Positives = 178/469 (37%), Gaps = 91/469 (19%)
Query: 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM 185
+ S ++ C G IE K++E K + +N LI G+ + ++ SA + +
Sbjct: 210 TTSIMVKGLCLKGRIEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKL 269
Query: 186 SQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM 245
G P+ QT+ L+ G+ K G ++I + +K + L + Q+ N +I +
Sbjct: 270 KMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRG---LSVNVQMYNNIIDARYKL 326
Query: 246 A---SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI 302
A+ L MS+ EP TY L+ + G+++ +LL Q+
Sbjct: 327 GFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQT------------ 374
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ GL P+ TYT L+ GY K G+
Sbjct: 375 -----------------------------------IRRGLAPNKLTYTPLVHGYCKQGEY 399
Query: 363 DSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISK-IQPGVGYSADAANHI 418
L + +S + D Y +IH L V+G + I + + G+ A+ N +
Sbjct: 400 TKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVL 459
Query: 419 YH-LINKGQIDAAYRIVNTLARSANINGEQLP----VGGFLVRH-------------MVK 460
+ L KG++ A +++ T NI + V GF +RH + K
Sbjct: 460 MNGLFKKGKLSMA-KVMLTEMLDQNIAPDAFVYATLVDGF-IRHGNLDEAKKLFQLIIEK 517
Query: 461 TNQPG-VGYSADAANHIYHLINKGQIDAAYRIVNTLARS---ANINGEQLPVGGFLVRHM 516
PG VGY+ I G +D A ++ + R+ +I + G++ +H
Sbjct: 518 GLDPGVVGYNV----MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQH- 572
Query: 517 VKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETF 565
++ VL + + +N P LI + K + A + F
Sbjct: 573 -----NMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLF 616
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 133/333 (39%), Gaps = 42/333 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ + L + +G+ PN++TY + L+ YC+ G
Sbjct: 347 DLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTY------TPLVHGYCKQGEYT 400
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
AT L M + + ALI+G A ++ +A I M G+ P A Y LM
Sbjct: 401 KATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLM 460
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K G + K + + Q+ F + + ++ A+ + ++ + GL+
Sbjct: 461 NGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLD 520
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSSLVNGDYL---DIIHALA 307
P Y ++ G++K G MD+ + + + S++++G Y+ ++ L
Sbjct: 521 PGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDG-YVKQHNMNAVLK 579
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEG----------PMMSQAGLEPSAQTYTKLM---C 354
+ G + +V + ++ + MM GL+PS TY+ L+ C
Sbjct: 580 IFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFC 639
Query: 355 GYAKHGDMDSIRRLLAQNGSS--------LVNG 379
AK G S L+ N + LVNG
Sbjct: 640 KEAKLGKAVSYFELMLINKCTPNDAAFHYLVNG 672
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 125/327 (38%), Gaps = 75/327 (22%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ YL + + + ++G PN +TY + LI YC+ GNIE A +
Sbjct: 562 YTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY------TALIDGYCKSGNIEKACQ 615
Query: 146 ILEFMR--------DKTFPISEGV--------FNALIYGHSQANDMASAEGILTMMSQAG 189
I MR D F I V + AL+ G +A+ + A +L M G
Sbjct: 616 IYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDG 675
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKI---------PSLKPQSELF-LCFSFQLTNLLI 239
EP+ Y L+ G+ K +D + P++ S L F + +L++
Sbjct: 676 CEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVL 735
Query: 240 LVSSDMA-------------------------SAEGILTMMSQAGLEPSAQTYTKLMCGY 274
V S M A ++ MM + G +P+ TYT ++ G+
Sbjct: 736 KVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGF 795
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
K G +D L + GS +++ +I+ +GH +DE A++
Sbjct: 796 GKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGH---LDEAYALL--------- 843
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAK 358
M Q +Y K++ GY +
Sbjct: 844 ---EEMKQTYWPKHVSSYCKVIEGYKR 867
Score = 47.0 bits (110), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 84/392 (21%), Positives = 143/392 (36%), Gaps = 62/392 (15%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L+ +E + PN + Y +K+IS C+ E A L MR + + + L
Sbjct: 296 LSLIEKEDFVPNTILY------NKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRIL 349
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
+ G + + IL+MM G PS + L+ Y K D S K+ LK +
Sbjct: 350 LCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDF-SYAYKL--LKKMEK 406
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTM---------MSQAGL---EPSAQTYTKLMCG 273
+ + N+LI G +T M AG + + ++ + +CG
Sbjct: 407 CECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCG 466
Query: 274 YAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA--------------VSGHGEYIDEVS 319
+ K V + +G Y ++I L + G G D +
Sbjct: 467 FGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYT 526
Query: 320 AIV---CF-----VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM---DSIRRL 368
+ CF + +WL+ M + G EP+ TYT L+ Y K + + + L
Sbjct: 527 YTILIDCFSKAGIIKQAHNWLDE--MVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEL 584
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQID 428
+ G Y +I SG+ E +I ++++ AD + +D
Sbjct: 585 MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRG----DADIPD----------VD 630
Query: 429 AAYRIVNTLARSANINGEQLPVGGFLVRHMVK 460
++I N +A N+ V G H VK
Sbjct: 631 MYFKIKNNVAEKPNVVTYGALVDGLCKAHKVK 662
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 108/297 (36%), Gaps = 69/297 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N+L+ Y ++ L K+E +P V Y LI + C G + G
Sbjct: 381 FNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGS------ICSGGELPGPV- 433
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
TF ++E + N+M SA +L + + ++ + +CG+
Sbjct: 434 --------TFELAEKAY----------NEMLSAGTVLNKV-------NVVSFARCLCGFG 468
Query: 206 KHGDMDSIKTK------IPSLKPQSEL--FLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
K + + +P SE+ FLC + ++ N L M
Sbjct: 469 KFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKE-----------MKG 517
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEY 314
G+ P TYT L+ ++K G + L + G Y +IHA +
Sbjct: 518 TGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSV 577
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+E+ +M G P+ TYT L+ GY K G+++ ++ A+
Sbjct: 578 ANELFE---------------LMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYAR 619
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 89/209 (42%), Gaps = 21/209 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y ALL V+ + P +FL ++ E +L++ LI K C++G A +
Sbjct: 174 YIALLDVFERGSYDRVPEEFLREIRGDDKE----VLGKLLN--VLIRKCCRNGLWNVALE 227
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL---EPSAQTYTKLMC 202
L ++D + + +NAL+ +A+ + +A+ + MS+ GL E + + + +C
Sbjct: 228 ELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALC 287
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAG 259
K + S+ K P + L+ N +I +S A L M
Sbjct: 288 KVGKWREALSLIEK-EDFVPNTILY--------NKMISGLCEASFFEEAMDFLNRMRSTS 338
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
P+ QTY L+CG + +R+L+
Sbjct: 339 CIPNVQTYRILLCGCLNKKQLGRCKRILS 367
>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 122/290 (42%), Gaps = 19/290 (6%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E+ P ++ +Y+A + + + L ++ +G++PN T+ LI C
Sbjct: 244 EMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG------LC 297
Query: 136 QDGNIEGATKI-LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G +E A ++ L+ ++ ++ + + +I G+ + +A AE +L M + GL P+
Sbjct: 298 KIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNT 357
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TYT L+ G+ K G D + +K + L +++ + A +L M
Sbjct: 358 NTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRM 417
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
+ GL TYT L+ + K G + L Q + D +A+
Sbjct: 418 ATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQ 477
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
+++ + + C GL P+ QTYT ++ GY + G + S
Sbjct: 478 MEQSQQL---FDKCL---------SIGLVPTKQTYTSMIAGYCRLGKLTS 515
Score = 45.8 bits (107), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 68/369 (18%), Positives = 129/369 (34%), Gaps = 103/369 (27%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPT----DFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
+PL + N +LRV L + F+ D +A+ + G+ P+ +++ L+
Sbjct: 139 LPLVVETANWVLRVGLRHPGCFAHAREAFDGMAR-AAGGVRPDHRSFRALVLGC------ 191
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C++G E A +L M + F + ++ + + + MS+ G P+
Sbjct: 192 CREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNM 251
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
Y+ + G + G + A +L
Sbjct: 252 VNYSAWIDGLCERGYVKQ-----------------------------------AFHVLEE 276
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
M GL+P+ T+T L+ G K G M+ RL +
Sbjct: 277 MVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLK------------------------- 311
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---Q 371
++ + +P+ TYT ++ GY K G + LL +
Sbjct: 312 ---------------------LVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVE 350
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ-----PGVGYSADAANHIYHLINKGQ 426
G + Y +IH G + E+++K++ P + Y+ +A I KG+
Sbjct: 351 QGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNI-YTYNAI--IGGFCKKGK 407
Query: 427 IDAAYRIVN 435
I AY+++
Sbjct: 408 IQEAYKVLR 416
>gi|255660880|gb|ACU25609.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 484
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YN L +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ + K G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVL 314
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 81/435 (18%), Positives = 166/435 (38%), Gaps = 56/435 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +N L + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G++D+
Sbjct: 264 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAAD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I G + +D++I K ++P + + +
Sbjct: 313 VLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A TL R G Q P L+R G+S +
Sbjct: 373 NPMIEYLCNNGQAXKA----ETLVRQLXKLGVQDPTALNTLIR----------GHSQE-- 416
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRL 533
G D+A+ ++ + R +B E+ LV+ +K N+P D A+ +
Sbjct: 417 ---------GSPDSAFELLKIMLRR-KVBSEKSAYNS-LVQSXLKKNEPXDAKAALDSMI 465
Query: 534 TDENLHPRAFNLAVL 548
+++L A +V+
Sbjct: 466 ENDHLPDSALFRSVM 480
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 19/243 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N L+ Y + ++E+ IEPN +T L+ C+ I A +
Sbjct: 266 FNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDG------MCKHNRISTAVE 319
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
M+ K + + I N+M A L MS+ G P A Y L+CG A
Sbjct: 320 FFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLA 379
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEP 262
+ G +D + + LK E C N+LI + + A+ L M AG++P
Sbjct: 380 QAGRLDDASSVVSKLK---EAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKP 436
Query: 263 SAQTYTKLMCGYAKHGDM----DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
+ TY L+ ++K G+ ++++ + G S Y +IHA ++ + IDE
Sbjct: 437 DSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNN---IDEA 493
Query: 319 SAI 321
I
Sbjct: 494 IKI 496
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 158/404 (39%), Gaps = 69/404 (17%)
Query: 114 IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
+ P+ + Y LI C+ G E A ++ MR + FN LI G+ ++
Sbjct: 224 VAPDTIMYNTLIDG------LCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSG 277
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI--------PSLKPQSE 225
++ A + M A +EP+ T L+ G KH + I T + LK +
Sbjct: 278 EIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKH---NRISTAVEFFRVMQQKGLKGNNV 334
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---S 282
+ F N+ ++M A L MS+ G P A Y L+CG A+ G +D S
Sbjct: 335 TYTVFINAFCNV-----NNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASS 389
Query: 283 VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
V L ++G L Y +I + E WL M AG+
Sbjct: 390 VVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQE-------------WLNE--MELAGV 434
Query: 343 EPSAQTYTKLMCGYAKHGDM----DSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYID 398
+P + TY L+ ++K G+ ++++ + G S Y +IHA ++ + ID
Sbjct: 435 KPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNN---ID 491
Query: 399 EIIS--KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVR 456
E I K V IY++ ++++L + +N F +
Sbjct: 492 EAIKIFKEMNNVASKVPPNTVIYNI-----------LIDSLCKQTQVN--------FALS 532
Query: 457 HMVKTNQPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLARSA 499
+ GV + N I+ L +K +D A+++++ + A
Sbjct: 533 LLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQA 576
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 138/329 (41%), Gaps = 25/329 (7%)
Query: 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEG 180
+ I+ ++LISK C+ GN A IL+ + NAL+ G +A +
Sbjct: 114 FPDTIALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNL 173
Query: 181 ILTMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
++ M ++P+ T+ L +C + + D + K+ K ++++F+ + N
Sbjct: 174 LMRKMKDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNT 233
Query: 238 LILVSSDMASAEGILTMMSQAGLE---PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSL 294
LI + E L +M + + P+ T+ L+ GY + G+++ +L + ++
Sbjct: 234 LIDGLCKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQ 293
Query: 295 VNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMC 354
+ + + + V G ++ + +S V F + M Q GL+ + TYT +
Sbjct: 294 IEPNVITL--NTLVDGMCKH-NRISTAVEFFRV---------MQQKGLKGNNVTYTVFIN 341
Query: 355 GYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYS 411
+ +M+ L + D Y +I LA +G + ++SK++ G+
Sbjct: 342 AFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEA-GFC 400
Query: 412 ADAANH---IYHLINKGQIDAAYRIVNTL 437
D + I K ++D A +N +
Sbjct: 401 LDRVCYNVLISEFCKKNKLDRAQEWLNEM 429
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 32/152 (21%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS------NSKLISK- 133
LD YN L+ + ++L ++E G++P+ VTY LIS N KL K
Sbjct: 401 LDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKF 460
Query: 134 -----------------------YCQDGNIEGATKILEFMRD--KTFPISEGVFNALIYG 168
YC + NI+ A KI + M + P + ++N LI
Sbjct: 461 MKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDS 520
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ + A +L M G+ P+ TY +
Sbjct: 521 LCKQTQVNFALSLLDDMKFRGVMPNTTTYNSI 552
>gi|356577073|ref|XP_003556653.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 581
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 13/214 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ T D+L + G+EP+ T+ + ++ C++GN+
Sbjct: 264 DVVTYNILINACCVGGRTSVAIDWLHSMVRSGVEPSAATF------TTILHALCREGNVV 317
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ + ++D + ++N L+ G+ + ++ A + M + G+ P T+ L+
Sbjct: 318 EAQKLFDGIQDVGIAPNAAMYNTLMDGYFKVREVGQASLLYEEMRRKGVSPDCVTFNILV 377
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL-CFSFQLTNLLILV-----SSDMASAEGILTMM 255
G+ K+G + + + S LFL C + IL+ + DM A I M
Sbjct: 378 GGHYKYGRKEDLNRLLKD-SILSGLFLDCLLPDIFTFNILIGGYCKTFDMVGASEIFNKM 436
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
GL+P TY M GY + M+ +L Q
Sbjct: 437 YSCGLDPDITTYNTRMHGYCRMRKMNKAVIILDQ 470
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 120/313 (38%), Gaps = 44/313 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY------C 135
D S N LLR +++ F + L + G+ P + LI + Y
Sbjct: 179 DFSVLNTLLRGFMNVGMGFEALEVLRIMRDVGVRPGLSSLAILIRLLLRVGDYGSVWKLF 238
Query: 136 QDGNIEG---ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
D +G + +L M +N LI + A L M ++G+EP
Sbjct: 239 NDMIFKGPRPSNSLLHLMPKFMCSPDVVTYNILINACCVGGRTSVAIDWLHSMVRSGVEP 298
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLLI---LVSSD 244
SA T+T ++ + G++ + ++ P + ++ N L+ +
Sbjct: 299 SAATFTTILHALCREGNVVEAQKLFDGIQDVGIAPNAAMY--------NTLMDGYFKVRE 350
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII- 303
+ A + M + G+ P T+ L+ G+ K+G + + RLL S+++G +LD +
Sbjct: 351 VGQASLLYEEMRRKGVSPDCVTFNILVGGHYKYGRKEDLNRLLKD---SILSGLFLDCLL 407
Query: 304 -----HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+ + G+ + D V A F M GL+P TY M GY +
Sbjct: 408 PDIFTFNILIGGYCKTFDMVGASEIFNK----------MYSCGLDPDITTYNTRMHGYCR 457
Query: 359 HGDMDSIRRLLAQ 371
M+ +L Q
Sbjct: 458 MRKMNKAVIILDQ 470
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 128/330 (38%), Gaps = 27/330 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YNA++ + +FL ++ + + P+ TY LI C+ +
Sbjct: 225 DAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDG------LCKASKTD 278
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A+++L M D+ FN+++ G +A A +L +M++ PS TY L+
Sbjct: 279 KASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLI 338
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K ++D K + + ++ + + + A ++ MS G
Sbjct: 339 SGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCT 398
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
P+ TY L+ G K + LL SS D Y I+ L G +D+
Sbjct: 399 PNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGR---LDKA 455
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
+V EG M + G PS TYT LM G + G +D + + S
Sbjct: 456 LKMV----------EG--MLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCT 503
Query: 379 GD---YLDIIHALAVSGHGEYIDEIISKIQ 405
D Y+ +++ S + +++ I+
Sbjct: 504 ADALAYVSLVNGYCKSSRTKEAQKVVDGIR 533
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 188/491 (38%), Gaps = 83/491 (16%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK 129
F E V D+ YN L+ T ++ L ++ +G+ P+ VT+ ++
Sbjct: 248 FLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDG-- 305
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
C+ G E A +L M ++ S +N LI G + ++ A+ ++ +G
Sbjct: 306 ----LCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSG 361
Query: 190 LEPSAQTYTKLMCGYAKHGDMD---------SIKTKIPSLKPQSELF--LCFSFQLTN-- 236
P TY+ L G K G +D S K P+L + L LC + +
Sbjct: 362 FVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAY 421
Query: 237 --LLILVSS-------------DMASAEGILTM-------MSQAGLEPSAQTYTKLMCGY 274
L LVSS D EG L M + G PS TYT LM G
Sbjct: 422 ELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 481
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE-------------YIDEV 318
+ G +D + + S D Y+ +++ S + YID
Sbjct: 482 CRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVY 541
Query: 319 SAIVCFVNICFHWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+A+ + + EG + M+ G P+ +TY +M G KHG +D L
Sbjct: 542 NAL-----MDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFL 596
Query: 370 AQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISK-IQPGVGYSADAANHIY-HLINK 424
S+ D Y II L + + +++ + IQ G+ A N + +
Sbjct: 597 ESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKE 656
Query: 425 GQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQ 484
+ D A I+ + + A ++ + + L+ + +TN+ G DA ++ ++ G
Sbjct: 657 ERFDDAVGILKNMIK-AGVDPDNVTYNT-LISGLSQTNRLG-----DAYELMHEMLRNGC 709
Query: 485 IDAAYRIVNTL 495
+ +A NT+
Sbjct: 710 VVSACTTYNTI 720
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 144/370 (38%), Gaps = 31/370 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP +I YN ++ + FL + S G P+ V+Y +I SK
Sbjct: 570 VP-NIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASK----- 623
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A ++L+ M P +N L+ + A GIL M +AG++P TY
Sbjct: 624 -PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYN 682
Query: 199 KLMCGYAKHGDM-DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
L+ G ++ + D+ + L+ + C ++ + + A ++ M+
Sbjct: 683 TLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTG 742
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
G+E + TY + K G +D LL++ + Y +I L E +D
Sbjct: 743 HGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLC---KAEQLDR 799
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGS 374
S L M++ GL ++ T+ L+ + K +D ++ L+ Q G
Sbjct: 800 ASK-----------LAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGC 848
Query: 375 SLVNGDYLDIIHALA----VSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAA 430
S Y +I L V E DE+ ++ V S IY L +G+ A
Sbjct: 849 SPSVITYNMVITCLCKLDKVDKAWELFDEM--AVRGIVASSVSYTVLIYGLCGQGRGKEA 906
Query: 431 YRIVNTLARS 440
+++ +A S
Sbjct: 907 LQVLEEMASS 916
>gi|255660866|gb|ACU25602.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 484
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNTITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ + K G+ D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSHCKSGNPDAAADVL 314
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 82/435 (18%), Positives = 166/435 (38%), Gaps = 56/435 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNTITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G+ D+
Sbjct: 264 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNSIFMRLISSHCKSGNPDAAAD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I G + +D++I K ++P + + +
Sbjct: 313 VLKAMIRLSVPTEAGHYGXLIXNFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A TL R G Q P L+R G+S +
Sbjct: 373 NPMIEYLCNNGQAXKA----ETLVRQLXKLGVQDPTALNTLIR----------GHSQE-- 416
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRL 533
G D+A+ ++ + R ++ E+ LV+ +K N+P D A+ +
Sbjct: 417 ---------GSPDSAFELLKIMLRR-KVDSEKSAYNS-LVQSYLKKNEPXDAKAALDSMI 465
Query: 534 TDENLHPRAFNLAVL 548
+++L A +V+
Sbjct: 466 ENDHLPDSALFRSVM 480
>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 831
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 156/371 (42%), Gaps = 50/371 (13%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I Y L+ +H S ++K++ G+ P+ + + +I+ S + GN++
Sbjct: 354 IITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFNAIINASS------ESGNLDQ 407
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM-SQAGLEPSAQTYTKLM 201
A KI E M++ + FN LI G+ + + + +L MM L+P+ +T L+
Sbjct: 408 AMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEMLQPNDRTCNILV 467
Query: 202 ---CGYAKHGDMDSIKTKIPS--LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
C K + +I K+ S +KP + F + + + S + + I+ M
Sbjct: 468 QAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSR----IGSTCTAEDMIIPRML 523
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG-----------SSLVNGDYLDIIHA 305
++P+ +T ++ GY + G M+ R + +SL+ G +L+I
Sbjct: 524 HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG-FLNIND- 581
Query: 306 LAVSGHGEYIDEVSA------IVCFVNICFHWLE-GPM---------MSQAGLEPSAQTY 349
+ G GE +D + +V F + W G M M + G++P +
Sbjct: 582 --MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAF 639
Query: 350 TKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQP 406
+ L GYA+ G+ + ++L Q V + Y II +G + ++ +K++
Sbjct: 640 SILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMRG 699
Query: 407 GVGYSADAANH 417
VG S + +
Sbjct: 700 SVGLSPNLTTY 710
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 7/203 (3%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFL-AKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
V D +N L R Y T + D + ++ ++PN T +++ YC++
Sbjct: 491 VKPDAVTFNTLARAYSRIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNG------YCEE 544
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G +E A + M++ + VFN+LI G NDM ++ +M + G++P T+
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
+ LM ++ GDM + + +F + + + AE IL M +
Sbjct: 605 STLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRK 664
Query: 258 AGLEPSAQTYTKLMCGYAKHGDM 280
G+ P+ YT+++ G+ G+M
Sbjct: 665 FGVRPNVVIYTQIISGWCSAGEM 687
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK 129
F EL V ++ +N+L++ +L+ + + +E G++P+ VT+ S
Sbjct: 553 FFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF------ST 606
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L++ + G+++ +I M + F+ L G+++A + AE IL M + G
Sbjct: 607 LMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFG 666
Query: 190 LEPSAQTYTKLMCGYAKHGDM 210
+ P+ YT+++ G+ G+M
Sbjct: 667 VRPNVVIYTQIISGWCSAGEM 687
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSF 232
A I + + G +PS TYT L+ + S+ K + L+P + LF
Sbjct: 338 AHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILF----- 392
Query: 233 QLTNLLILVSSD---MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
N +I SS+ + A I M ++G +P+A T+ L+ GY K G ++ RLL
Sbjct: 393 ---NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 447
Score = 40.0 bits (92), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 18/125 (14%)
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL---DIIH 304
A I + + G +PS TYT L+ + S+ L+++ + + D + II+
Sbjct: 338 AHSIFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFNAIIN 397
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
A + SG+ +D+ I M ++G +P+A T+ L+ GY K G ++
Sbjct: 398 ASSESGN---LDQAMKIF------------EKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 365 IRRLL 369
RLL
Sbjct: 443 SSRLL 447
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 98/210 (46%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I M ++ +N LIYG + D+ A+ + MS GL+P TYT L+
Sbjct: 259 LAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ + + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRS--VDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +LL +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 129/303 (42%), Gaps = 35/303 (11%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNIC 328
G+ K+G +D + Q S ++ D Y +I+ L G + ++
Sbjct: 249 DGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLX--------- 299
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDII 385
MS GL+P TYT L+ G K GD+++ R+ + + L Y +I
Sbjct: 300 ------DEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALI 353
Query: 386 HALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARS 440
L G + + E++S ++P +G N KG + +++ + R
Sbjct: 354 SGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLLKEMQRD 410
Query: 441 ANI 443
+
Sbjct: 411 GYV 413
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 119/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ + M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+++ R+ + + L Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 47/309 (15%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGD----MDSVRRLLAQSGS-SLVNGDYLDIIHALAVSGH----GEYIDEVSAIV 322
G+ K+G M+ +++L+QS S L+ Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVVLAMEIYKQMLSQSLSPDLIT--YNTLIYGLCKKGDLKQAQDLIDE----- 301
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNG 379
MS GL+P TYT L+ G K GD+++ R+ + + L +
Sbjct: 302 --------------MSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDV 347
Query: 380 DYLDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIV 434
Y +I L G + + E++S ++P +G N KG + +++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLL 404
Query: 435 NTLARSANI 443
+ R +
Sbjct: 405 KEMQRDGYV 413
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C++G +
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF------TTLIDGHCKNGRVV 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ ++ + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +LL +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 123/304 (40%), Gaps = 34/304 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 196 TYTKLMCGYAKHGD----MDSIKTKIP-SLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
T+T L+ G+ K+G M+ K + SL P + + L D+ A+
Sbjct: 243 TFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCK-----KGDLKQAQD 297
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALA 307
++ MS GL+P TYT L+ G K GD+++ R+ + + L + Y +I L
Sbjct: 298 LIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLC 357
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
G +D + M GL+P TYT ++ + K GD+ + +
Sbjct: 358 QEGRS--VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 368 LLAQ 371
LL +
Sbjct: 403 LLKE 406
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 128/298 (42%), Gaps = 32/298 (10%)
Query: 82 DISHYNALLRVYLD---NEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
++ YN L+ Y N + L ++ + PN T+ LI + +D
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDG------FWKDD 310
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ G+ K+ + M D+ + +N+LI G ++ A + M AG++P+ TY
Sbjct: 311 NLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYN 370
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---M 255
L+ G+ K+ + S+K Q + + ++ N+LI + + + M
Sbjct: 371 ALINGFCKNDMLKEALDMFGSVKGQGAV---PTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII--HALAVSGHGE 313
+ G+ P TY L+ G ++G++++ ++L Q L + D++ H L + G+
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ----LTSKGLPDLVTFHIL-MEGYCR 482
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ A + MS+ GL+P TY +M GY K G++ + + Q
Sbjct: 483 KGESRKAAMLL----------KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 530
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 68 DPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
D F G+ VP YN L+ Y ++E +GI P+ TY LI+
Sbjct: 387 DMFGSVKGQGAVP-TTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
C++GNIE A K+ + + K P F+ L+ G+ + + A +L MS+
Sbjct: 446 ------LCRNGNIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSK 498
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS---D 244
GL+P TY +M GY K G++ + ++ + L + + N+L+ S
Sbjct: 499 MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRM--NVASYNVLLQGYSQKGK 556
Query: 245 MASAEGILTMMSQAGLEPSAQTY 267
+ A +L M + GL P+ TY
Sbjct: 557 LEDANMLLNEMLEKGLVPNRITY 579
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 97/227 (42%), Gaps = 7/227 (3%)
Query: 63 NLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQ 122
NLP + DV ++ YN+L+ + K+ S G++PN +TY
Sbjct: 311 NLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYN 370
Query: 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGIL 182
LI+ +C++ ++ A + ++ + + ++N LI + + + +
Sbjct: 371 ALING------FCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALK 424
Query: 183 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
M + G+ P TY L+ G ++G++++ K L + L +F +
Sbjct: 425 EEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRK 483
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ A +L MS+ GL+P TY +M GY K G++ + + Q
Sbjct: 484 GESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 530
>gi|255660888|gb|ACU25613.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 481
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YN L +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ + K G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVL 314
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 77/434 (17%), Positives = 164/434 (37%), Gaps = 54/434 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +N L + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + + +L+ + K G++D+
Sbjct: 264 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAAD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I G + +D++I K ++P + + +
Sbjct: 313 VLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAAN 474
I +L N GQ A +V L + V+ N G+S +
Sbjct: 373 NPMIEYLCNNGQXXKAETLVRQLXKLG-------------VQDXTALNTLIRGHSQE--- 416
Query: 475 HIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLT 534
G D+A+ ++ + R ++ E+ LV+ +K N+P D A+ +
Sbjct: 417 --------GSPDSAFELLKIMLRR-KVDSEKSAYNS-LVQSYLKKNEPXDAKAALDSMIE 466
Query: 535 DENLHPRAFNLAVL 548
+++L A +V+
Sbjct: 467 NDHLPDSALFRSVM 480
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 155/382 (40%), Gaps = 53/382 (13%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI----------------- 125
I +N++L ++++ F ++ G+ PN TY LI
Sbjct: 114 IRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLT 173
Query: 126 ------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
S LI+ + GN+ A ++ + M + +N LI G +
Sbjct: 174 WMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKG 233
Query: 174 DMASAEGILT-MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
D A I +++++ + PS +TY ++ G K G +D +K + F+F
Sbjct: 234 DFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTF 293
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL-AQSG 291
+ + + +AE + M ++GL P +TY ++ G + G ++ L S
Sbjct: 294 SSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSK 353
Query: 292 SSLVN-GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYT 350
++ N Y +I L + +V +C+ W ++ + GL+ + TY
Sbjct: 354 NNCCNIVSYNMLIQGLLDN------KKVEQAICY------W---QLLHERGLKADSTTYG 398
Query: 351 KLMCGYAKHGDMDSIRRLL--AQN-GSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPG 407
L+ G K+G ++ R+L A+N G+ L Y ++H L G E E+I +++
Sbjct: 399 LLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKN 458
Query: 408 VGYSADAANHIYHLINKGQIDA 429
+H+++ + G + A
Sbjct: 459 ---RRKLNSHVFNSLINGYVRA 477
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 106/239 (44%), Gaps = 17/239 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQG-IEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ YN L+ +L + +L ++ + P+ TY +I+ C+ G +
Sbjct: 218 DVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMING------LCKLGKL 271
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ + ++ M+ F+++I+G S+A + +AE + M ++GL P +TY +
Sbjct: 272 DESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAM 331
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQ 257
+ G + G ++ + + C + N+LI L + + A ++ +
Sbjct: 332 LSGLFRTGKLNKCFELWNVMSKNN----CCNIVSYNMLIQGLLDNKKVEQAICYWQLLHE 387
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS---GSSLVNGDYLDIIHALAVSGHGE 313
GL+ + TY L+ G K+G ++ R+L ++ G+ L Y ++H L G E
Sbjct: 388 RGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLE 446
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 113/283 (39%), Gaps = 24/283 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN L++ LDN+ + L +G++ + TY LI+ C++G +
Sbjct: 358 NIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTY------GLLINGLCKNGYLN 411
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +ILE ++ + ++++++G + + A ++ M + + ++ + L+
Sbjct: 412 KALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLI 471
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY + ++ + + +K + S+ + + + A L M + GL+
Sbjct: 472 NGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLK 531
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
P TY+ L+ G + +D L Q + + D + IIH L + + E+
Sbjct: 532 PDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEI 591
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
M Q P T+ +M G K GD
Sbjct: 592 FT---------------QMRQVNCVPDLVTHNTIMEGLYKAGD 619
>gi|326505288|dbj|BAK03031.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326529675|dbj|BAK04784.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 597
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 152/374 (40%), Gaps = 31/374 (8%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
G V ++ YNA+L V L + ++++ G+ + L S + I+ Y
Sbjct: 171 GRAGVAMNTHVYNAMLHVCLKAGDAARAEALMTRMDATGVPLD------LFSFNTAIALY 224
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G A + + M + +N +I+G + M A + M AG+EP
Sbjct: 225 VRKGMQYEAMCVRDRMANDGVEADIVTWNTVIHGMCKEGRMKEASQLHRDMVAAGIEPDT 284
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TYT L+ GY + GD+ ++ + L ++ + M G+L+
Sbjct: 285 VTYTTLVDGYCRAGDVGEAMNLRAVMEARGMLPGVATYNAIIRKLCEDGKMKEVNGLLSE 344
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
M + ++ T L+ Y+K GDM S V+ + +SG L Y +IH +
Sbjct: 345 MDERKVQADHVTCNTLINSYSKKGDMPSACKVKTRMMESGLQLDQFTYKALIHGFS---K 401
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL--- 368
+ +DE + F M AG P+ ++ L+ G+ K + D++ +
Sbjct: 402 AKQLDEAKEAL------FE------MMGAGFSPNYSVFSWLVDGFYKRNNADAVLLIPDE 449
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADA---ANHIYHLINKG 425
L + G Y +I L + +++ ++Q G G AD A+ Y + G
Sbjct: 450 LMKRGLPPDKSVYRSLIRRLCKKRLVDLAQKVLHQMQ-GKGLEADCLVYASLAYAQLTAG 508
Query: 426 QIDAAYRIVNTLAR 439
++ AA +N +A+
Sbjct: 509 KLAAASDTLNDMAK 522
Score = 43.9 bits (102), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 128/327 (39%), Gaps = 61/327 (18%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S L+ Q G A ++ + MR + AL+ ++A A+A + M +
Sbjct: 113 SWLLLALAQGGRAGDAVRVFDHMRAEGLAPDAHACTALLTSLARARMTATARRVFDGMGR 172
Query: 188 AGLEPSAQTYTKLMCGYAKHGD---MDSIKTKIPSLKPQSELF----------------- 227
AG+ + Y ++ K GD +++ T++ + +LF
Sbjct: 173 AGVAMNTHVYNAMLHVCLKAGDAARAEALMTRMDATGVPLDLFSFNTAIALYVRKGMQYE 232
Query: 228 -LCFSFQLTNLLILVSSDMAS---------AEGILTMMSQ-------AGLEPSAQTYTKL 270
+C ++ N V +D+ + EG + SQ AG+EP TYT L
Sbjct: 233 AMCVRDRMAN--DGVEADIVTWNTVIHGMCKEGRMKEASQLHRDMVAAGIEPDTVTYTTL 290
Query: 271 MCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNI 327
+ GY + GD+ ++R ++ G Y II L G + EV+ ++
Sbjct: 291 VDGYCRAGDVGEAMNLRAVMEARGMLPGVATYNAIIRKLCEDGK---MKEVNGLLS---- 343
Query: 328 CFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDI 384
M + ++ T L+ Y+K GDM S ++ + ++G L Y +
Sbjct: 344 --------EMDERKVQADHVTCNTLINSYSKKGDMPSACKVKTRMMESGLQLDQFTYKAL 395
Query: 385 IHALAVSGHGEYIDEIISKIQPGVGYS 411
IH + + + E + ++ G G+S
Sbjct: 396 IHGFSKAKQLDEAKEALFEMM-GAGFS 421
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 122/315 (38%), Gaps = 43/315 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VPL++ Y L+ D L +E G+ N + Y + LI + +
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLY------TTLIHGHFMNK 412
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N E A +L M++K + ++ ALI G + + A+ +LT M ++GLEP+ YT
Sbjct: 413 NSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYT 472
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL------ 252
+M K G K+P + L FQ + D G +
Sbjct: 473 TMMDACFKSG-------KVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISH 525
Query: 253 -TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAV 308
M GL+P+ Q YT L+ G K+G ++ +L + G SL Y ++
Sbjct: 526 FNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLK 585
Query: 309 SGH--------GEYIDEVSAIVCFVNICF--HWLEGPMMSQA----------GLEPSAQT 348
G+ + ID + F CF + MM +A G+ P
Sbjct: 586 QGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAV 645
Query: 349 YTKLMCGYAKHGDMD 363
Y L+ Y K G+++
Sbjct: 646 YNCLISKYQKLGNLE 660
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 29/279 (10%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
A++ +G+ N TY LI + C+ G ++ A +L+ M + P++ +
Sbjct: 315 LFAQMRVRGMALNEFTYTCLIDGT------CKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
L+ G + +A AE +L MM +AG+ + YT L+ G+ + + + + +K +
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428
Query: 225 -ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
EL + L L V + A+ +LT M ++GLEP+ YT +M K G +
Sbjct: 429 LELDISLYGALIQGLCNVHK-LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEA 487
Query: 284 RRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
+L + SG Y +I L +G IDE + H+ + M
Sbjct: 488 IAMLQKILDSGFQPNVITYCALIDGLCKAGS---IDEAIS---------HFNK---MRDL 532
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSL 376
GL+P+ Q YT L+ G K+G ++ +L + G SL
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL 571
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 12/213 (5%)
Query: 76 ELDVPLDISHYN-ALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
EL VP + N LLR+ D + +L Q PN T+ + +I
Sbjct: 150 ELRVPPNTRTCNHILLRLARDRSGRL-----VRRLFEQLPAPNVFTF------NIVIDFL 198
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C++G + A + M++ FN+LI G+ + ++ E ++ M ++G +
Sbjct: 199 CKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADV 258
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY L+ + K G M++ ++K + + +F + A +
Sbjct: 259 VTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQ 318
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
M G+ + TYT L+ G K G +D LL
Sbjct: 319 MRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351
>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 942
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 26/236 (11%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I+ + + G++ + ++ + MR + FNALI G + M A IL M+ AG
Sbjct: 596 IINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAG 655
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+ + TYTK+M GYA GD L+ + F+++ S M SA
Sbjct: 656 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSAL 715
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
+ MS + ++ Y L+ G+A+ GD+ L+ Q V D Y I A
Sbjct: 716 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 775
Query: 307 AVSGH----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+ +G + I+E+ A+ G++P+ +TYT L+ G+A+
Sbjct: 776 SKAGDMNRATQTIEEMEAL-------------------GVKPNIKTYTTLIKGWAR 812
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 81/191 (42%), Gaps = 41/191 (21%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +++ Y T ++ +L+++G+E + TY+ L+ C+ G ++ A
Sbjct: 663 YTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKAC------CKSGRMQSALA 716
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + P + V+N LI G ++ D+ A ++ M + G++P TYT + +
Sbjct: 717 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACS 776
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K GDM+ A + M G++P+ +
Sbjct: 777 KAGDMN-----------------------------------RATQTIEEMEALGVKPNIK 801
Query: 266 TYTKLMCGYAK 276
TYT L+ G+A+
Sbjct: 802 TYTTLIKGWAR 812
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/415 (20%), Positives = 163/415 (39%), Gaps = 76/415 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +L+ Y + K++ +GIE + VTY S ++ + + GN E A
Sbjct: 348 YTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTY------SVIVGGFSKAGNAEAADH 401
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + ++ ++ +IY H Q +M AE ++ M + G++ Y +M GY
Sbjct: 402 WFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYT 461
Query: 206 -----KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
K G + + K P + C L NL V ++ A + +M + G+
Sbjct: 462 MVADEKKGLIVFKRLKECGFTPTVVTYGC----LINLYTKVGK-ISKALEVSRVMKEEGV 516
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
+ + +TY+ ++ G+ K D + + + D Y +II A G+ +D
Sbjct: 517 KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGN---MDR 573
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM-------DSIRRL-- 368
V M + P+ +T+ ++ G+AK GDM D +RR
Sbjct: 574 AIQTV------------KEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGC 621
Query: 369 --LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEII-----------SKIQPG---VGYSA 412
++L+NG ++ + E +DE+ +KI G VG +
Sbjct: 622 VPTVHTFNALING----LVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTG 677
Query: 413 DAANHIYHLINKG-QID------------AAYRIVNTLARSANINGEQLPVGGFL 454
A + L N+G ++D + R+ + LA + ++ +P F+
Sbjct: 678 KAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFV 732
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 97/235 (41%), Gaps = 18/235 (7%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++ Y + G++ A + E MR + + ++ +LI+ ++ DM A + M + G
Sbjct: 316 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEEG 375
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+E S TY+ ++ G++K G+ ++ K + + + +M AE
Sbjct: 376 IEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 435
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHAL 306
++ M + G++ Y +M GY D V + L + G + Y +I+
Sbjct: 436 ALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLY 495
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
G EVS + M + G++ + +TY+ ++ G+ K D
Sbjct: 496 TKVGKISKALEVSRV---------------MKEEGVKHNLKTYSMMINGFVKLKD 535
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 127/299 (42%), Gaps = 25/299 (8%)
Query: 68 DPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
D FS + D+ I Y +L++ + + L ++ S I PN VT+
Sbjct: 136 DIFSYMKAK-DISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTF------ 188
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+ L+ +C++G + A +L+ M + +N+L+YG+S ++ A + +M
Sbjct: 189 NVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMIT 248
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
G +P +Y+ L+ GY K +D K + Q S+ + +
Sbjct: 249 KGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLRE 308
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIH 304
A+ + M G P+ TY L+ G+ K G + RL S+ + + Y +++
Sbjct: 309 AQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVN 368
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
A+ SG+ + E+ + + FV GL+P+ Q YT ++ G K G +D
Sbjct: 369 AMCKSGNLKDARELFSEL-FV--------------IGLQPNVQIYTTIINGLCKEGLLD 412
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/366 (21%), Positives = 138/366 (37%), Gaps = 70/366 (19%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E L++ Y+ L+ D + ++++ I P TY + LI C
Sbjct: 108 EAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTY------TSLIQGLC 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ A+ +L M + FN L+ + + +AEG+L M++ G+EP
Sbjct: 162 NFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVV 221
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
TY LM GY+ + +++ A + +M
Sbjct: 222 TYNSLMYGYS-----------------------------------MWTEVVEARKLFDVM 246
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHG 312
G +P +Y+ L+ GY K +D ++L + GS+ N Y +IH L G
Sbjct: 247 ITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRL 306
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
++ F N M G P+ TY L+ G+ K G + RL
Sbjct: 307 REAQDL-----FKN----------MHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAM 351
Query: 373 GSSLVNGD---YLDIIHALAVSGHGEYIDEIISK-----IQPGVGYSADAANHIYHLINK 424
S+ + + Y +++A+ SG+ + E+ S+ +QP V N L +
Sbjct: 352 QSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIIN---GLCKE 408
Query: 425 GQIDAA 430
G +D A
Sbjct: 409 GLLDEA 414
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 118/296 (39%), Gaps = 31/296 (10%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
LAK G++P VT+ LI+ + K+ Q A ++ + M + + + +
Sbjct: 33 LAKGIKLGLQPTIVTFTTLINGLGKVGKFAQ------AVELFDDMVARGCQPDDYTYTTI 86
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSIKT--KIPSL 220
I G + + A A G+ M +AG + + TY+ L +C Y + + I + K +
Sbjct: 87 INGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDI 146
Query: 221 KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
P + L N S A +L M+ + P+ T+ L+ + K G +
Sbjct: 147 SPTIFTYTSLIQGLCNF-----SRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKV 201
Query: 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
+ +L V D + + + G+ + + V A F +M
Sbjct: 202 LAAEGVLKTMTEMGVEPDV--VTYNSLMYGYSMWTEVVEARKLF----------DVMITK 249
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGSSLVNGDYLDIIHALAVSGH 393
G +P +Y+ L+ GY K +D ++L + GS+ N Y +IH L G
Sbjct: 250 GCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGR 305
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 151/388 (38%), Gaps = 49/388 (12%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
LA++ G P+ TY LIS + G + A + MR++ +N+
Sbjct: 101 LLAEMRDNGCVPDVRTYNCLIST------LGKAGRLSEAFTLFAEMRERGCVPDTFTYNS 154
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD-MDSIK----TKIPS 219
LIYG + A +L M + G P TY+ L+ G K G+ + + K K
Sbjct: 155 LIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRG 214
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
KP S F L + + A +L M + G++P TY L+ G+ K GD
Sbjct: 215 RKPDSITFTALMDALGK-----AGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGD 269
Query: 280 MDSVRRLLAQSGSSLVNGDYLDII-HALAVSG--HGEYIDEVSAIVCFVNICFHWLEGPM 336
+ LL + NG D++ ++ ++G +DE ++
Sbjct: 270 LVEAYNLLDEMKR---NGCKPDVVTYSCLITGLIKASQLDEACQVL------------KK 314
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGH 393
M + G P TY L+ G K G ++ RL + S N D Y +I AL +
Sbjct: 315 MEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAAR 374
Query: 394 GEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSANINGEQLPV 450
E + +++ VG D + I L GQ+D A R+ + + R ++ + +
Sbjct: 375 VESACVLFEEMES-VGIQPDLFTYCSIITVLGKAGQVDDADRLFSEM-RGKGLSPDVITY 432
Query: 451 GGFLVRHMVKTNQPGVGYSADAANHIYH 478
FL N G G A I+
Sbjct: 433 NAFL-------NSLGRGGRFKEARKIFE 453
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 113/296 (38%), Gaps = 59/296 (19%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
P D+ Y++L+ + T +++ +G +P+ +T+ + L+ + G
Sbjct: 180 CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITF------TALMDALGKAG 233
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A ++L+ M+++ +NALI G + D+ A +L M + G +P TY+
Sbjct: 234 RVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS 293
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G K +D A +L M +
Sbjct: 294 CLITGLIKASQLD-----------------------------------EACQVLKKMEKE 318
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
G P TY L+ G K G ++ RL + S N D Y +I AL + E
Sbjct: 319 GCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVE-- 376
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
SA V F M G++P TY ++ K G +D RL ++
Sbjct: 377 ---SACVLFEE----------MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSE 419
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 113/276 (40%), Gaps = 26/276 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ S ++ES GI+P+ TY +I+ ++ K G ++
Sbjct: 358 DVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIIT---VLGKA---GQVD 411
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ MR K +NA + + A I M ++GL P TY L+
Sbjct: 412 DADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALL 471
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G +K ++D + L Q F F ++ ++ A +L + GL
Sbjct: 472 LGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLW 531
Query: 262 PSAQTYTKLMCGYAKHGDM----DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
P A +Y L+ AK G + +++ L Q G + Y +I AL +G
Sbjct: 532 PGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIV-SYSSLISALGQTGQ------ 584
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
++ F LE MS+ GL+ S ++Y+ L+
Sbjct: 585 -------IDTAFELLE--EMSKRGLKLSPRSYSNLV 611
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 128/301 (42%), Gaps = 31/301 (10%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 121 YPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGF 180
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L M A + M GL P T+T L+
Sbjct: 181 RLKSAMHASGVQPDVYT-YSVLINGL--CKEXKMDEANELFDEMLVXGLVPXGVTFTTLI 237
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNIC 328
G+ K+G +D + Q S + D Y +I+ L G + + ++
Sbjct: 238 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGB---LKQAHVLI------ 288
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDYLDII 385
MS G +P TYT L+ G K GD+D+ R+ + Q L + Y +I
Sbjct: 289 ------XEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALI 342
Query: 386 HALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSAN 442
L G ++++ ++ VG D + I KG + +++ + R +
Sbjct: 343 SGLCQEGRSVDAEKMLREMLS-VGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGH 401
Query: 443 I 443
+
Sbjct: 402 V 402
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 117/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + + G+ P+ V+Y L+S Y
Sbjct: 118 ECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSG------YI 171
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M ++ LI G + M A + M GL P
Sbjct: 172 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGV 231
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS L ++ + B+ A ++ M
Sbjct: 232 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEM 291
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S G +P TYT L+ G K GD+D+ R+ + Q L + Y +I L G
Sbjct: 292 SLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 351
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M G +P +TYT ++ + K GD+ + +LL +
Sbjct: 352 --VDAEKML-------------REMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKE 395
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 160/388 (41%), Gaps = 53/388 (13%)
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
+++ + LI YC++G +E A +I+ M DK S +NA+I G + A A+GIL
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
M GL P TY L+ + + K + Q + SF ++L+ + S
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSF--SSLMAVFSR 118
Query: 244 DMASAEGILTM--MSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGD 298
+ + ++ M + GL P YT LM GY ++G+M +R + + G L
Sbjct: 119 NRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIA 178
Query: 299 YLDIIHALA----VSGHGEYIDEV---SAIVCFVN----ICFHWLEGPM---------MS 338
Y I++ L ++ + DE+ A+ F I H +G M M+
Sbjct: 179 YNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMT 238
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYID 398
Q ++P Y L+ G+ K G+M + S L +G +I H Y
Sbjct: 239 QRNIKPDIVAYNTLIDGFCKVGEM--------EKASELWDG----MISRKIFPNHITY-- 284
Query: 399 EIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHM 458
I+ VG+ ++A +I KG I NT+ + +G+ FL R +
Sbjct: 285 GILINAYCSVGHVSEAFRLWDVMIEKG-IKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI 343
Query: 459 VKTNQPGVGYSADAANHIYH--LINKGQ 484
K P +HI + LIN G+
Sbjct: 344 AKGVAP---------DHISYNTLINDGK 362
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 119/296 (40%), Gaps = 60/296 (20%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D+ +++L+ V+ N H + ++ G+ P+ V Y + L+ YC++G
Sbjct: 103 VP-DLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY------TVLMHGYCRNG 155
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A KI + M ++ + +N ++ G + + A+ + M + G P T+T
Sbjct: 156 NMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFT 215
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G+ + G+M TK SL M+Q
Sbjct: 216 TLIHGHCQDGNM----TKALSL-------------------------------FGTMTQR 240
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYI 315
++P Y L+ G+ K G+M+ L S + +++ +I+A GH +
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH---V 297
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
E + W +M + G++P+ T ++ GY + GD L +
Sbjct: 298 SEAFRL---------W---DVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGR 341
>gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 484
Score = 70.9 bits (172), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + +L+ + K G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIIMRLISSHCKSGNLDAAADVL 314
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 82/435 (18%), Positives = 167/435 (38%), Gaps = 56/435 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E I+ MM + +L+ + K G++D+
Sbjct: 264 GLCNAEKMSEARVIL-----------KEMMDKYLAPTDNSIIMRLISSHCKSGNLDAAAD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I +G + +D++I K ++P + + +
Sbjct: 313 VLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A TL R G Q P L+R G+S +
Sbjct: 373 NSMIEYLCNNGQASKA----ETLVRQLMKLGVQDPTALNTLIR----------GHSQE-- 416
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRL 533
G D+A+ ++ + R ++ E+ LV+ +K N+P D A+ +
Sbjct: 417 ---------GSPDSAFELLKIMLRR-KVDSEK-SAYNLLVQSYLKKNEPXDAKAALDSMI 465
Query: 534 TDENLHPRAFNLAVL 548
+++L A +V+
Sbjct: 466 ENDHLPDSALFRSVM 480
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 157/389 (40%), Gaps = 46/389 (11%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ Y L+ ++ ++ +G EPN TY + LI C++G ++
Sbjct: 290 VRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTY------TVLIDYLCKEGRMDE 343
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A K+L M +K S FNALI + + M A G+L +M + P+ +TY +L+C
Sbjct: 344 ALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELIC 403
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA---SAEGILTMMSQAG 259
G+ + MD + L E L N LI ++ SA + +M + G
Sbjct: 404 GFCRGKSMDR---AMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDG 460
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY-- 314
P T+ M + G + ++L V + Y +I +G E+
Sbjct: 461 FSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAA 520
Query: 315 --IDEVSAIVCFVN-ICFHWL------EGPM---------MSQAGLEPSAQTYTKLMCGY 356
+ A C N I F+ + EG + M++ ++P+ TY L+
Sbjct: 521 SLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEV 580
Query: 357 AKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSAD 413
K D D +L + SS + Y I A G E +E++ KI+ G D
Sbjct: 581 LKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIK-NEGVLLD 639
Query: 414 AANHIYH-LINK----GQIDAAYRIVNTL 437
+ IY+ LIN G +D+A+ ++ +
Sbjct: 640 S--FIYNLLINAYGCMGLLDSAFGVLRRM 666
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 12/207 (5%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
+ DV + YN L+ L + L +L S G +PN VTY + I Y
Sbjct: 562 AKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTY------TAFIKAY 615
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C G +E A +++ ++++ + ++N LI + + SA G+L M G EPS
Sbjct: 616 CSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSY 675
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY+ LM KH ++ K K P + + N I D +
Sbjct: 676 LTYSILM----KHLVIE--KHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEK 729
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMD 281
M++ G P+ TY+KL+ G K G ++
Sbjct: 730 MAECGCVPNLNTYSKLINGLCKVGRLN 756
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 100/258 (38%), Gaps = 38/258 (14%)
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMR-DKTFPISEGVFNALIYGHSQANDMASAEGILT 183
+S + LI C+ G + A + MR D FP + L+ ++ A +
Sbjct: 256 VSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVR-TYTVLVCALCESGRELEALSLFG 314
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---------KTKIPSLKPQSELFLCFSFQL 234
M + G EP+ TYT L+ K G MD K PS+ P + L + +
Sbjct: 315 EMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKR- 373
Query: 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSL 294
M A G+L +M + P+ +TY +L+CG+ + MD LL + S
Sbjct: 374 --------GMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESK 425
Query: 295 VNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
++ D Y +IH L G +D S + +M + G P T+
Sbjct: 426 LSPDVVTYNTLIHGLCEVG---VVDSASRLF------------RLMIRDGFSPDQWTFNA 470
Query: 352 LMCGYAKHGDMDSIRRLL 369
M + G + ++L
Sbjct: 471 FMVCLCRMGRVGEAHQIL 488
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 117/338 (34%), Gaps = 88/338 (26%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------ 127
+NAL+ Y L +ES+ + PN TY +LI
Sbjct: 363 FNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMV 422
Query: 128 -----------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
+ LI C+ G ++ A+++ M F + FNA + + +
Sbjct: 423 ESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVG 482
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL---------------- 220
A IL + + ++ + YT L+ GY K G ++ + +
Sbjct: 483 EAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMI 542
Query: 221 -------KPQSELFLC-----FSFQLT----NLL---ILVSSDMASAEGILTMMSQAGLE 261
K Q + L F + T N+L +L D A IL + +G +
Sbjct: 543 DGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQ 602
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD-IIHALAVSGHGEYIDEVSA 320
P+ TYT + Y G ++ ++ + + G LD I+ L ++ +G
Sbjct: 603 PNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNE---GVLLDSFIYNLLINAYG-------- 651
Query: 321 IVCFVNICFHWLEGPM-----MSQAGLEPSAQTYTKLM 353
C L+ M G EPS TY+ LM
Sbjct: 652 -------CMGLLDSAFGVLRRMFGTGCEPSYLTYSILM 682
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 122/315 (38%), Gaps = 43/315 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VPL++ Y L+ D L +E G+ N + Y + LI + +
Sbjct: 359 VPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLY------TTLIHGHFMNK 412
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N E A +L M++K + ++ ALI G + + A+ +LT M ++GLEP+ YT
Sbjct: 413 NSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYT 472
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL------ 252
+M K G K+P + L FQ + D G +
Sbjct: 473 TMMDACFKSG-------KVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISH 525
Query: 253 -TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAV 308
M GL+P+ Q YT L+ G K+G ++ +L + G SL Y ++
Sbjct: 526 FNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLK 585
Query: 309 SGH--------GEYIDEVSAIVCFVNICF--HWLEGPMMSQA----------GLEPSAQT 348
G+ + ID + F CF + MM +A G+ P
Sbjct: 586 QGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAV 645
Query: 349 YTKLMCGYAKHGDMD 363
Y L+ Y K G+++
Sbjct: 646 YNCLISKYQKLGNLE 660
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 29/279 (10%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
A++ +G+ N TY LI + C+ G ++ A +L+ M + P++ +
Sbjct: 315 LFAQMRVRGMALNEFTYTCLIDGT------CKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
L+ G + +A AE +L MM +AG+ + YT L+ G+ + + + + +K +
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428
Query: 225 -ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
EL + L L V + A+ +LT M ++GLEP+ YT +M K G +
Sbjct: 429 LELDISLYGALIQGLCNVHK-LDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEA 487
Query: 284 RRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
+L + SG Y +I L +G IDE + H+ + M
Sbjct: 488 IAMLQKILDSGFQPNVITYCALIDGLCKAGS---IDEAIS---------HFNK---MRDL 532
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSL 376
GL+P+ Q YT L+ G K+G ++ +L + G SL
Sbjct: 533 GLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL 571
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 12/213 (5%)
Query: 76 ELDVPLDISHYN-ALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
EL VP + N LLR+ D + +L Q PN T+ + +I
Sbjct: 150 ELRVPPNTRTCNHILLRLARDRSGRL-----VRRLFEQLPAPNVFTF------NIVIDFL 198
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C++G + A + M++ FN+LI G+ + ++ E ++ M ++G +
Sbjct: 199 CKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADV 258
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY L+ + K G M++ ++K + + +F + A +
Sbjct: 259 VTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQ 318
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
M G+ + TYT L+ G K G +D LL
Sbjct: 319 MRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLL 351
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 131/326 (40%), Gaps = 34/326 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V ++ YNA + Y + L +E +G+ N VTY LI + G
Sbjct: 256 VKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHG------FSNIG 309
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
IE A ++ E MR+K V+ ++I + ++ ++ A + M+ GL PSA TY
Sbjct: 310 KIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYG 369
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMM 255
L+ G K G M++ + + ++ + + + + N LI S + A + +M
Sbjct: 370 ALIHGVCKAGQMEAAQMLVNEMQGKG---IDLNPVIFNTLIDGYCESGMVDEALRLQVVM 426
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHG 312
+ GLE Y + G K D + LL + G S + +I G+
Sbjct: 427 EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN- 485
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
FV + E M + G P+ TY L+ GY+K G+M +L
Sbjct: 486 -----------FVEAKRVFRE---MEEKGNVPNIITYNVLIDGYSKRGNMKEAHKL---- 527
Query: 373 GSSLVNGDYLDIIHALAVSGHGEYID 398
L N + ++ HGE ID
Sbjct: 528 KDELENRGLIPDVYTCTSLIHGECID 553
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 107/243 (44%), Gaps = 28/243 (11%)
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C+ G++E K+++ + K + +NA I G+ + D+ ILT+M + G+ +
Sbjct: 236 CKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNV 295
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKP---QSELFLCFSFQLTNLLILVSSDMASAEGI 251
TYT L+ G++ G ++ + ++ ++++++ S N S ++ A +
Sbjct: 296 VTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCR---SGNVKRALVL 352
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAV 308
M+ GL PSA TY L+ G K G M++ + L+ + + G +D +I +
Sbjct: 353 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNE-----MQGKGIDLNPVIFNTLI 407
Query: 309 SGHGE--YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G+ E +DE + +M + GLE Y + G K D +
Sbjct: 408 DGYCESGMVDEALRL------------QVVMEKKGLESDVFAYNSIASGLCKLNRKDEAK 455
Query: 367 RLL 369
LL
Sbjct: 456 GLL 458
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 150/380 (39%), Gaps = 75/380 (19%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
+++ +V L NE D +++ S+GI P+ VTY S LIS +C G + A +
Sbjct: 233 DSMCKVKLVNE----AFDLFSEMISKGISPDVVTY------SALISGFCILGKLNDAIDL 282
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
M + FN L+ + M + + MM + G++P+ TY LM GY
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC- 341
Query: 207 HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQT 266
+ ++ A+ I M+Q G+ P Q+
Sbjct: 342 ----------------------------------LVKEVNKAKSIFNTMAQGGVNPDIQS 367
Query: 267 YTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY----IDEV- 318
Y+ ++ G+ K D L + + D Y +I L+ SG Y +D++
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427
Query: 319 -----SAIVCFVNI----C-FHWLEGPM-----MSQAGLEPSAQTYTKLMCGYAKHGDMD 363
I + +I C H ++ + + G++P+ TY+ L+ G + G ++
Sbjct: 428 DRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLE 487
Query: 364 SIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH--- 417
R++ L G +L Y +I V G ++SK++ G DA +
Sbjct: 488 DARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDN-GCIPDAKTYEII 546
Query: 418 IYHLINKGQIDAAYRIVNTL 437
I L K + D A +++ +
Sbjct: 547 ILSLFKKDENDMAEKLLREM 566
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 6/133 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP I YN++L L KL+ +GI+PN TY S LI CQ G
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTY------SILIKGLCQSG 484
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A K+ E + K ++ + +I G A +L+ M G P A+TY
Sbjct: 485 KLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYE 544
Query: 199 KLMCGYAKHGDMD 211
++ K + D
Sbjct: 545 IIILSLFKKDEND 557
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 119/293 (40%), Gaps = 21/293 (7%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V + Y AL+ Y N + + L +++++ I P+ +TY +I+ C G
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVIN-------ACARG 224
Query: 139 NI--EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+ EG + MR + +N L+ + AE + M+ G+ P T
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y+ L+ + K ++ + + + L S+ + S + A G+ M
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
AG P+A TY+ L+ + + G D VR+L + SS + D + V G G Y
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
EV + FH M + +EP +TY ++ K G + R++L
Sbjct: 405 EVVTL-------FH-----DMVEENIEPDMETYEGIIFACGKGGLHEDARKIL 445
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 117/291 (40%), Gaps = 54/291 (18%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN-D 174
P++ + + S + LI+ Y ++G E + ++L+ M+++ S +N +I ++ D
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234
G+ M G++P TY L+ A G D
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDE---------------------- 265
Query: 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ--SGS 292
AE + M+ G+ P TY+ L+ + K ++ V LL + SG
Sbjct: 266 -------------AEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG 312
Query: 293 SLVN-GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
SL + Y ++ A A SG I E + FH M AG P+A TY+
Sbjct: 313 SLPDITSYNVLLEAYAKSGS---IKEAMGV-------FH-----QMQAAGCTPNANTYSV 357
Query: 352 LMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIIS 402
L+ + + G D +R+L + SS + D + V G G Y E+++
Sbjct: 358 LLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVT 408
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 146/410 (35%), Gaps = 89/410 (21%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI+ YN LL Y + ++++ G PN TY S L++ + Q G +
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTY------SVLLNLFGQSGRYD 369
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQAN-------------------DMASAEGIL 182
++ M+ +N LI + DM + EGI+
Sbjct: 370 DVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII 429
Query: 183 TMMSQAGLE----------------PSAQTYTKLMCGYAKHGDMDSIKTKIPSL-----K 221
+ GL PS++ YT ++ + + + ++
Sbjct: 430 FACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSN 489
Query: 222 PQSELF--LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
P E F L +SF L+ +E IL+ + +G+ + T+ + Y + G
Sbjct: 490 PSIETFHSLLYSFARGGLV-------KESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGK 542
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+ + S + D + L+V +DE C E M
Sbjct: 543 FEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDE----------CREQFE--EMKA 590
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS-----------LVNGDYLDIIHAL 388
+ + PS Y ++ Y K D + LL + S+ ++ GDY D +
Sbjct: 591 SDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQ 650
Query: 389 AVSGHGEYIDEIISKIQPGVG---YSADAANHIYHLINKGQIDAAYRIVN 435
V EY+ + ++ G+G Y+A + ++ L GQ + A R++N
Sbjct: 651 IV----EYVLDKLNSEGCGLGIRFYNA-LLDALWWL---GQKERAARVLN 692
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 174/430 (40%), Gaps = 52/430 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y L+ + + F ++ GIEPN TY + LI +C+ G ++
Sbjct: 294 DVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTY------TVLIDYFCKVGKMD 347
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
++L M +K S FNALI G+ + M A +L M + P+++TY +L+
Sbjct: 348 EGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELI 407
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI--LVSSDMA-SAEGILTMMSQA 258
CG+ + MD + L E L + N LI L + + SA + +M +
Sbjct: 408 CGFCRKKSMDR---AMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKD 464
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH--GEYID 316
G P +T+ + K G ++ ++ + + ++ + G+ E
Sbjct: 465 GFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEAN--EFLYTALIDGYCKAEKFS 522
Query: 317 EVSAIV-------CFVN-ICFHWL------EGP---------MMSQAGLEPSAQTYTKLM 353
+ + CF N I F+ L EG +M + +P+ TYT L+
Sbjct: 523 DAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILI 582
Query: 354 CGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI-QPGV- 408
+ D D L Q SS + Y I A G +E++ KI + G+
Sbjct: 583 EEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGIL 642
Query: 409 --GYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMV--KTNQP 464
+ D + Y I GQ+D+A+ ++ + + Q L++H++ K N+
Sbjct: 643 LDSFIYDVLVNAYGCI--GQLDSAFGVLIRMFDTGCEPSRQ--TYSILLKHLIFEKYNKE 698
Query: 465 GVGYSADAAN 474
G+G ++ N
Sbjct: 699 GMGLDLNSTN 708
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 18/222 (8%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
G+ D + Y L+ L FL ++ S G +PN VTY + I Y
Sbjct: 567 GKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTY------TAFIKAY 620
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C+ G + A +++ ++++ + +++ L+ + + SA G+L M G EPS
Sbjct: 621 CRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSR 680
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
QTY+ L+ KH + + L S + + N I +D +
Sbjct: 681 QTYSILL----KHLIFEKYNKEGMGLDLNST-----NISVDNANIWKIADFEIITMLFEK 731
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSS 293
M + G P+ TY+KL+ G K + RL + +SG S
Sbjct: 732 MVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGIS 773
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 18/231 (7%)
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A +L + F +S +N L S+ + + M G+EP+ ++ ++
Sbjct: 139 ARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVN 198
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS--DMASAEGILTMMSQAGL 260
+ K G++ K L F C SF T+L++ ++ A + +M Q G
Sbjct: 199 AHCKIGNVVVAKAYFCGLMKFG--FCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGC 256
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI-IHALAVSGHGEYIDEVS 319
+ +YT L+ G+ + G +D L Q +G + D+ + + V+ E E
Sbjct: 257 LRNEVSYTNLIHGFCEVGKIDEALELFFQMKE---DGCFPDVPTYTVLVAAFCEVGKETE 313
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
A+ F M + G+EP+ TYT L+ + K G MD +L+
Sbjct: 314 ALKFFEE----------MVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLS 354
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 95/254 (37%), Gaps = 67/254 (26%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+ LI YC+ + A K+ E M + +E + LI+G + + A + M +
Sbjct: 229 TSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKE 288
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
G P TYT L+ + + G + +LK E
Sbjct: 289 DGCFPDVPTYTVLVAAFCEVGK------ETEALKFFEE---------------------- 320
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
M + G+EP+ TYT L+ + K G MD +L+ + L G
Sbjct: 321 -------MVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLS---TMLEKG---------- 360
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA----------GLEPSAQTYTKLMCGYA 357
VS++V F + + + MM A + P+++TY +L+CG+
Sbjct: 361 ---------LVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFC 411
Query: 358 KHGDMDSIRRLLAQ 371
+ MD LL +
Sbjct: 412 RKKSMDRAMALLNK 425
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/343 (22%), Positives = 137/343 (39%), Gaps = 29/343 (8%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F ++E G P+ VTY + LI C+ G+++ A +L+ M K + +N
Sbjct: 362 FWNEMEVDGYAPDVVTY------TILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNT 415
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+I G +A + A +L M G++P+A +Y + Y K GD ++K +
Sbjct: 416 MICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRG 475
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ + + + + ++ AE I + + GL P + TY LM Y+K G +D
Sbjct: 476 IMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKAT 535
Query: 285 RLLAQSGSSLVNGDYLDI---IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
+LL++ S D + I I+ L +G +D W +
Sbjct: 536 QLLSEMISKGCEPDVMIINSLINTLYKAGR---VDAA------------WKMFGRLKNLK 580
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEII 401
L P+ TY L+ G K G + L S + + L + +D +
Sbjct: 581 LAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLAL 640
Query: 402 SKI--QPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLAR 439
+ + D + IY LI +G+ID A+ + + +
Sbjct: 641 KMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKK 683
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 122/311 (39%), Gaps = 33/311 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+AL+ T + L +++S G+ PN TY + I + I+ A
Sbjct: 238 YSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTY------TICIRALGRARRIDDAWG 291
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I + M D+ + LI A + A+ + M + P TY LM +
Sbjct: 292 IFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFG 351
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K GD++++K ++ ++ + + S D+ A +L +M+ G+ P+
Sbjct: 352 KVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLH 411
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF- 324
TY ++CG K +D LL S V + L + +G+ D AI F
Sbjct: 412 TYNTMICGLLKARRLDEALELLENMESLGVKPTAFS--YVLFIDYYGKSGDPAKAIDTFE 469
Query: 325 ----------VNIC----FHWLEGPMMSQA----------GLEPSAQTYTKLMCGYAKHG 360
+ C + E +S+A GL P + TY LM Y+K G
Sbjct: 470 TMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAG 529
Query: 361 DMDSIRRLLAQ 371
+D +LL++
Sbjct: 530 QIDKATQLLSE 540
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 160/428 (37%), Gaps = 61/428 (14%)
Query: 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY----GHSQAN 173
+V Y+ L + + G I A L M + F ++ +N LI+ G
Sbjct: 160 KVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCN-- 217
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ 233
A + M G++PS +TY+ LM + GD I + +K +++
Sbjct: 218 ---EALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYT 274
Query: 234 LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293
+ + + + A GI M G P TYT L+ G +D + L + +S
Sbjct: 275 ICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRAS 334
Query: 294 LVNGD---YLDIIHALAVSGHGEYI--------------DEVSAIVCFVNIC-------- 328
+ D Y+ ++ G E + D V+ + +C
Sbjct: 335 SHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRA 394
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL----VNGDYLDI 384
F L+ +M+ G+ P+ TY ++CG K +D LL +N SL Y+
Sbjct: 395 FDMLD--VMTTKGIFPNLHTYNTMICGLLKARRLDEALELL-ENMESLGVKPTAFSYVLF 451
Query: 385 IHALAVSGH-GEYIDEIISKIQPGVGYSADAAN-HIYHLINKGQIDAAYRIVNTLAR--- 439
I SG + ID + + G+ S A N +Y L G+I A I N L +
Sbjct: 452 IDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGL 511
Query: 440 ---SANIN--------GEQLPVGGFLVRHMV-KTNQPGVGYSADAANHIYHLINKGQIDA 487
S N Q+ L+ M+ K +P V N +Y G++DA
Sbjct: 512 SPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLY---KAGRVDA 568
Query: 488 AYRIVNTL 495
A+++ L
Sbjct: 569 AWKMFGRL 576
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/341 (20%), Positives = 124/341 (36%), Gaps = 65/341 (19%)
Query: 64 LPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQ 123
L ++ F T L + + YN L+ L + T + ++S G PN TY
Sbjct: 777 LDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNL 836
Query: 124 L-----------------------------ISNSKLISKYCQDGNIEGATKILEFMRDKT 154
L I+++ +IS + N+ A + +
Sbjct: 837 LLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGD 896
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD--- 211
F + + LI G +A A I M G P++ Y L+ G+ K G++D
Sbjct: 897 FSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFAC 956
Query: 212 -----SIKTKI-PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+K I P LK + L C + ++ + A + GL+P
Sbjct: 957 ELFKKMVKEGIRPDLKSYTILVEC---------LCITGRIDEAVQYFEELKLTGLDPDTV 1007
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIV 322
+Y ++ G K +D L ++ + ++ D Y +I L ++G
Sbjct: 1008 SYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGK----------- 1056
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
V++ E + GLEPS TY L+ G++ G+ D
Sbjct: 1057 --VDVAVKMYEE--LQLVGLEPSVFTYNALIRGHSLSGNKD 1093
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 115/309 (37%), Gaps = 51/309 (16%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------ 127
YN LL + ++ D +++ S+G EPN +T+ +IS
Sbjct: 834 YNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELM 893
Query: 128 -----------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
LI + G E A KI E M D + ++N LI G ++ ++
Sbjct: 894 SGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEID 953
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFS 231
A + M + G+ P ++YT L+ G +D + K+ L P + + ++
Sbjct: 954 FACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDT---VSYN 1010
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
F + L S + A + + M G+ P TY L+ G +D ++ +
Sbjct: 1011 FIINGL--GKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEE-- 1066
Query: 292 SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
LV + + + GH ++ A F M G P+ +T+ +
Sbjct: 1067 LQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVF----------KKMMVVGCSPNTETFAQ 1116
Query: 352 LMCGYAKHG 360
L Y + G
Sbjct: 1117 LPNKYPRAG 1125
Score = 43.9 bits (102), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 104/273 (38%), Gaps = 55/273 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L++ Y T L+++ S+G EP+ +I NS LI+ + G ++
Sbjct: 514 DSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPD-----VMIINS-LINTLYKAGRVD 567
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ +++ + +N L+ G + + A + M+++G P+ T+ L+
Sbjct: 568 AAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLL 627
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+K+ +D A + M+
Sbjct: 628 DCLSKNDAVD-----------------------------------LALKMFCRMTMMNCN 652
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVSA 320
P TY ++ G + G +D Q ++ DY+ + + V HG D +
Sbjct: 653 PDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKV 711
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
++ FV+ QA L+ ++Q + +LM
Sbjct: 712 VMEFVH------------QACLQTNSQFWGELM 732
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 16/213 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y A++ Y + L++++ QG+ PN TY + LI +C+ GN
Sbjct: 364 NVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTY------TTLIDGHCKVGNFV 417
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++++ M + F + +NA+I G + + A +L +S GL+ TYT LM
Sbjct: 418 RAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILM 477
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS-----DMASAEGILTMMS 256
+ + D + + L + F+ + + L+S+ M +E +
Sbjct: 478 SVHCRQADTNRSLVFFNKM-----LKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAV 532
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
GL P+ +TYT ++CGY ++G+ +L +
Sbjct: 533 SLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQR 565
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 38/274 (13%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL + S G +PN TY + +I+ YC++ + A +L M+++ + +
Sbjct: 352 FLKLVRSDGYKPNVHTY------TAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPS 219
LI GH + + A ++ +M + G P+ TY ++ G K G +D K +
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
L+ ++ + + +D + M + G P +YT L+ + +
Sbjct: 466 LQADG-----VTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQ 520
Query: 280 MDSVRRLLAQSGSSLVNGDYLDII-----HALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
M RL ++ S L +I + + G+ Y + A+ F
Sbjct: 521 MKESERLFEEAVS-------LGLIPTKKTYTSMICGYCRYGNTSLAVKLF---------- 563
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
MS G P + TY L+ G K +D R L
Sbjct: 564 QRMSNHGCAPDSITYGALISGLCKESKLDDARNL 597
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
+ K+ G+ PN + + + LI+ C+ G+I+ A ++LE M + + +
Sbjct: 281 YFWKMVEMGLAPNVINF------TALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT 334
Query: 165 LIYGHSQANDMASA-EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
LI G + A L ++ G +P+ TYT ++ GY K ++ + + ++ Q
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ 394
Query: 224 SELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
L + LI + A ++ +M + G P+ TY ++ G K G +
Sbjct: 395 G---LVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSL 451
Query: 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF---------------V 325
D RLL + + D + + + +S H D ++V F
Sbjct: 452 DEAYRLLNKVSVHGLQAD--GVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYT 509
Query: 326 NICFHWLEGPMMSQA----------GLEPSAQTYTKLMCGYAKHGD 361
+ + M ++ GL P+ +TYT ++CGY ++G+
Sbjct: 510 TLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGN 555
Score = 43.9 bits (102), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI Y L+ + + + S G+ P + TY + +I YC+ GN
Sbjct: 504 DIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTY------TSMICGYCRYGNTS 557
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ + M + + ALI G + + + A + M GL P T L
Sbjct: 558 LAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLA 617
Query: 202 CGYAKHGD 209
Y K D
Sbjct: 618 YEYCKKDD 625
Score = 40.4 bits (93), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 68/338 (20%), Positives = 125/338 (36%), Gaps = 44/338 (13%)
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
++ LE + + ++ +A++G + + ++ Q L S Q N ++ V+
Sbjct: 144 LIGNKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQG---LVPSTQTLNCVLDVAV 200
Query: 244 DMA---SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNG 297
M AE + M Q G+ P ++ ++ G + R L + G + N
Sbjct: 201 GMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNA 260
Query: 298 DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
II A G Y++ V + + W M + GL P+ +T L+ G
Sbjct: 261 TCTLIIDAFCQKG---YVNRV--------VGYFW----KMVEMGLAPNVINFTALINGLC 305
Query: 358 KHGDMDSIRRLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADA 414
K G + LL + G + +I L G E + K+ GY +
Sbjct: 306 KQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNV 365
Query: 415 ANHIYHLINKGQIDAAYR-------------IVNTLARSANINGEQLPVGGFLVRHMVKT 461
+ + + D R + NT + I+G VG F+ + +
Sbjct: 366 HTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDG-HCKVGNFVRAYELMD 424
Query: 462 NQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 496
G+S + + I L KG +D AYR++N ++
Sbjct: 425 LMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVS 462
>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g39230, mitochondrial; AltName: Full=Protein LATERAL
ORGAN JUNCTION; Flags: Precursor
gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
Length = 867
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 147/361 (40%), Gaps = 28/361 (7%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N + ++ + T FL +E +GIEPN V Y ++ +C+ N++ A I
Sbjct: 453 NKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNN------MMLAHCRMKNMDLARSI 506
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
M +K + ++ LI G + D +A ++ M+ + E + Y ++ G K
Sbjct: 507 FSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCK 566
Query: 207 HGDMDSIKTKIPSL-KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
G K + +L K + C S+ + D SA MS+ G P+
Sbjct: 567 VGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVV 626
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
T+T L+ G+ K MD + + S + D L AL + G + D +A F
Sbjct: 627 TFTSLINGFCKSNRMDLALEMTHEMKSMELKLD-LPAYGAL-IDGFCKKNDMKTAYTLFS 684
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYL 382
+ + GL P+ Y L+ G+ G MD+ + + + +G S Y
Sbjct: 685 E----------LPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYT 734
Query: 383 DIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN----KGQIDAAYRIVNTLA 438
+I L G+ ++ S++ +G D H+ L+N KGQ A +++ +
Sbjct: 735 TMIDGLLKDGNINLASDLYSELL-DLGIVPDEILHMV-LVNGLSKKGQFLKASKMLEEMK 792
Query: 439 R 439
+
Sbjct: 793 K 793
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/394 (18%), Positives = 148/394 (37%), Gaps = 97/394 (24%)
Query: 104 DFLAKLESQ-GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
D L ++ + G+ ++ TY + +I + ++GN+E A ++++ M P+S
Sbjct: 295 DLLREMRGKLGVPASQETY------TSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAA 348
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-----IKTKI 217
+L+ G+ + N++ A + M + GL P ++ ++ + K+ +M+ ++ K
Sbjct: 349 TSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKS 408
Query: 218 PSLKPQS---------------------------ELFLCFSFQLTNLLILVSSD--MASA 248
+ P S E ++ F + +L + +A
Sbjct: 409 VRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAA 468
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
L MM Q G+EP+ Y +M + + +MD R + ++
Sbjct: 469 TSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSE------------------- 509
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
M + GLEP+ TY+ L+ G+ K+ D + +
Sbjct: 510 ----------------------------MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 369 LAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLI 422
+ Q +S + Y II+ L G E++ + YS ++ I +
Sbjct: 542 INQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFV 601
Query: 423 NKGQIDAA---YRIVNTLARSANINGEQLPVGGF 453
G D+A YR ++ +S N+ + GF
Sbjct: 602 KVGDTDSAVETYREMSENGKSPNVVTFTSLINGF 635
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 103/233 (44%), Gaps = 12/233 (5%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
+ + YN+++ ++ T S + ++ G PN VT+ + LI+ +C+ +
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTF------TSLINGFCKSNRM 641
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A ++ M+ + + ALI G + NDM +A + + + + GL P+ Y L
Sbjct: 642 DLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSL 701
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQA 258
+ G+ G MD+ K ++ C F T ++ +L ++ A + + +
Sbjct: 702 ISGFRNLGKMDAAIDLYK--KMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL 759
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
G+ P + L+ G +K G ++L + V + L +++ ++GH
Sbjct: 760 GIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVL--LYSTVIAGH 810
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 152/374 (40%), Gaps = 69/374 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI---------------- 125
++ YN ++ + ++ +++ +G+EPN TY LI
Sbjct: 483 NVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVI 542
Query: 126 -----SN--------SKLISKYCQDGNIEGATKILE-FMRDKTFPISEGVFNALIYGHSQ 171
SN + +I+ C+ G A ++L+ +++K + +S +N++I G +
Sbjct: 543 NQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVK 602
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSEL-- 226
D SA MS+ G P+ T+T L+ G+ K MD + ++ S++ + +L
Sbjct: 603 VGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPA 662
Query: 227 --FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
L F N DM +A + + + + GL P+ Y L+ G+ G MD+
Sbjct: 663 YGALIDGFCKKN-------DMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAI 715
Query: 285 RLLAQSGSSLVNGD---YLDIIHALAVSGH--------------GEYIDEVSAIVCFVNI 327
L + + ++ D Y +I L G+ G DE+ +V +
Sbjct: 716 DLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGL 775
Query: 328 CF--HWLEGPM----MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDY 381
+L+ M + + P+ Y+ ++ G+ + G+++ RL + + D
Sbjct: 776 SKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHD- 834
Query: 382 LDIIHALAVSGHGE 395
D + L VSG E
Sbjct: 835 -DTVFNLLVSGRVE 847
Score = 40.4 bits (93), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 62/136 (45%), Gaps = 6/136 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL + ++S YN+L+ + + + D K+ + GI + TY + +I
Sbjct: 688 ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTY------TTMIDGLL 741
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+DGNI A+ + + D E + L+ G S+ A +L M + + P+
Sbjct: 742 KDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVL 801
Query: 196 TYTKLMCGYAKHGDMD 211
Y+ ++ G+ + G+++
Sbjct: 802 LYSTVIAGHHREGNLN 817
>gi|226493938|ref|NP_001152190.1| ATP binding protein [Zea mays]
gi|195653677|gb|ACG46306.1| ATP binding protein [Zea mays]
gi|413926813|gb|AFW66745.1| ATP binding protein [Zea mays]
Length = 376
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 14/242 (5%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIE----PNRVTYQQLISNSKLISK 133
DVPL LLR + L KL G + PN L++ L
Sbjct: 101 DVPLPTHSLALLLRRLFTTRSVAAARSLLDKLHPSGEDGCPRPNPAPRGALLA---LADA 157
Query: 134 YCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPS 193
C+ G +++L +RD ++NAL+ + A+D + + M G++P
Sbjct: 158 VCRRGEPREISRVLPVLRDHGVRADAHLYNALMKANVAADDPGAVLRVFRQMRSDGVDPD 217
Query: 194 AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGI 251
TY L+ G A+ G + + + ++ + L ++ T+L+ + V D A +
Sbjct: 218 LVTYNTLIFGLARAGMVAKARAFLDAMAAEGHLPDVVTY--TSLMNGMCVKGDALGALKL 275
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAV 308
L M G +P+ +TY+ L+ G K+ +D V + +A +G+ L + Y + AL
Sbjct: 276 LEEMQGKGCQPNERTYSTLLMGLCKNKKLDKAVEVYKSMAAAGTKLESPAYASFVRALCR 335
Query: 309 SG 310
SG
Sbjct: 336 SG 337
>gi|255660892|gb|ACU25615.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 481
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
L M L P+ + + +L+ + K G++D+ +L
Sbjct: 277 XLKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVL 314
Score = 46.6 bits (109), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 67/162 (41%), Gaps = 4/162 (2%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
AE M +EP+ TYT L+ GY +D RL+ +
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEE 245
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 136/329 (41%), Gaps = 34/329 (10%)
Query: 85 HYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
+YN +L+ + E + L ++ + PN T + +I+ C+ G ++ T
Sbjct: 270 NYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATL------NVIINTLCRKGLLQKVT 323
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT---KLM 201
LE M + +NA+I G + ++ SA +L+ M G +P TY K +
Sbjct: 324 LYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGL 383
Query: 202 CGYAKHGDMDSIKTKIPS---LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
C + D + + K+ L S SF LIL A + M +
Sbjct: 384 CSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLIL------QAFEVFKQMPEK 437
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
G P++ TY+ ++ G K G M+ LL + + N D + + +++ + I+EV
Sbjct: 438 GCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKE-DKIEEV 496
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
+V H L+ +G+ P Y ++ G ++G D +LA S
Sbjct: 497 VQVV-------HKLQ-----DSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCM 544
Query: 379 GD---YLDIIHALAVSGHGEYIDEIISKI 404
D Y+ +I L G+ + E++S++
Sbjct: 545 PDESTYIILIEGLFYEGYSKEARELLSRL 573
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/329 (18%), Positives = 127/329 (38%), Gaps = 26/329 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN LL+ + + + ++G EPN VTY + +I C++G+++
Sbjct: 197 DVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTY------NVIIDAMCREGDVD 250
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L + + + +N ++ G A+ IL M + P+ T ++
Sbjct: 251 QARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVII 310
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+ G + + + + ++ + ++ SA +L+ M G +
Sbjct: 311 NTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCK 370
Query: 262 PSAQTYT---KLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P TY K +C + D + + ++Q+ N + II G
Sbjct: 371 PDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKG-------- 422
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
+ F + M + G P++ TY+ ++ G K G M+ LL + + N
Sbjct: 423 -----LILQAFEVFK--QMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFN 475
Query: 379 GD--YLDIIHALAVSGHGEYIDEIISKIQ 405
D Y + +L E + +++ K+Q
Sbjct: 476 TDKMYRVLTESLNKEDKIEEVVQVVHKLQ 504
>gi|357626529|gb|EHJ76589.1| putative leucine rich protein [Danaus plexippus]
Length = 941
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ HYN LLRVY+ N + F+ E ++PN T++ ++ + G+I
Sbjct: 43 FDVEHYNELLRVYIANNKKLVVSKFIG--EMGAVKPNLTTFELILRT------LGEAGDI 94
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
T+++ M+ + P +E VFN+LI H ++ ++ + ILTMM L+ S TYT +
Sbjct: 95 NQCTEVISNMKAQGLPATENVFNSLIICHGKSGNLDNIPEILTMMKSLQLDYSVNTYTAI 154
Query: 201 MCGY 204
Y
Sbjct: 155 ARAY 158
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 126/309 (40%), Gaps = 40/309 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y AL+ YL + + + S+G PN VTY S LI +C+ G +E
Sbjct: 511 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY------SALIDGHCKAGQVE 564
Query: 142 GATKILEFM-RDKTFPISEGVFN---------------ALIYGHSQANDMASAEGILTMM 185
A +I E M K P + F AL+ G +++ + A +L M
Sbjct: 565 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 624
Query: 186 SQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
S G EP+ Y L+ G K G +D +KT++ + L+ +S + +
Sbjct: 625 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT-YSSLIDRYFKVKR 683
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI 302
D+AS +L+ M + P+ YT+++ G K G D +L+ + +
Sbjct: 684 QDLASK--VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV--V 739
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ + G G ++ + C LE M G+ P+ TY L+ K+G +
Sbjct: 740 TYTAMIDGFG--------MIGKIETCLELLE--RMGSKGVAPNYVTYRVLIDHCCKNGAL 789
Query: 363 DSIRRLLAQ 371
D LL +
Sbjct: 790 DVAHNLLEE 798
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 150/363 (41%), Gaps = 59/363 (16%)
Query: 67 EDPFSV---HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFL-AKLESQGIEPNRVTYQ 122
E FSV G+ +P D S Y+ +L YL N L +++ G+ + TY
Sbjct: 424 EKAFSVIREMIGQGFIP-DTSTYSKVLN-YLCNASKMELAFLLFEEMKRGGLVADVYTY- 480
Query: 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGIL 182
+ ++ +C+ G IE A K MR+ + + ALI+ + +A ++ A +
Sbjct: 481 -----TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 535
Query: 183 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTN--- 236
M G P+ TY+ L+ G+ K G ++ I ++ K ++ + F N
Sbjct: 536 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 595
Query: 237 --------LL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SV 283
LL S + A +L MS G EP+ Y L+ G K G +D V
Sbjct: 596 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 655
Query: 284 RRLLAQSG--------SSLVNGDYLDIIHALAVSGHGEYIDEVSA--IVCFVNICFHWLE 333
+ +++ G SSL++ + LA + ++ A +V + + ++
Sbjct: 656 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM----ID 711
Query: 334 G--------------PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG 379
G MM + G +P+ TYT ++ G+ G +++ LL + GS V
Sbjct: 712 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 771
Query: 380 DYL 382
+Y+
Sbjct: 772 NYV 774
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 16/234 (6%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNAL+ + + ++ P +FL ++ + ++ + Q ++ L+ K+C++G+ A +
Sbjct: 127 YNALVDLIVRDDDEKVPEEFLQQIR----DDDKEVFGQFLN--VLVRKHCRNGSFSIALE 180
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
L ++D F S +N LI +A+ + SA I MS A L T
Sbjct: 181 ELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLC 240
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPS 263
K G T + ++E F+ + T L+ + +S A L M P+
Sbjct: 241 KVGKWREALTLV-----ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 295
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEY 314
TY+ L+CG + +R+L G + ++HA SG Y
Sbjct: 296 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSY 349
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 6/142 (4%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P + Y++L+ Y + + L+K+ PN V Y ++I C+ G
Sbjct: 665 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDG------LCKVGK 718
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A K+++ M +K + + A+I G + + +L M G+ P+ TY
Sbjct: 719 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 778
Query: 200 LMCGYAKHGDMDSIKTKIPSLK 221
L+ K+G +D + +K
Sbjct: 779 LIDHCCKNGALDVAHNLLEEMK 800
>gi|168047776|ref|XP_001776345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672305|gb|EDQ58844.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 503
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 113/282 (40%), Gaps = 53/282 (18%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
I +C G ++ A I M P + ++N LI + + + AEG++T M + G
Sbjct: 180 FIKAFCDAGRLKEALLITTEMEKLNVPFNVVIYNILIDAYGRVGQLEEAEGLMTEMRERG 239
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
++P+ TY L+ GY + KP+ + + AE
Sbjct: 240 IQPNVGTYNALITGYLEA-------------KPKRQFVV-------------------AE 267
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
G++ M +GL P T+T L+ Y G + ++ + + V + Y +I+A
Sbjct: 268 GLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKARGVQPNSYSYTALINAY 327
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
A E A F M+ + G+ P+ +TYT L+ Y + GD++ ++
Sbjct: 328 AERRCPE-----KAARAF----------EMIRKQGVNPTVETYTALLDAYRRAGDLEMVQ 372
Query: 367 ---RLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
+ + G Y+ I+ A G + ++I + +
Sbjct: 373 AVWKSMKVEGCVATRVTYMTILDAFQKQGRYKEARDLIEEFK 414
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 24/261 (9%)
Query: 107 AKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
A L + +E V + +I N LI Y + G +E A ++ MR++ + G +NALI
Sbjct: 193 ALLITTEMEKLNVPFNVVIYNI-LIDAYGRVGQLEEAEGLMTEMRERGIQPNVGTYNALI 251
Query: 167 YGHSQAN---DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
G+ +A AEG++ M +GL P T+T L+ Y G + + +K +
Sbjct: 252 TGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTFTMLLGAYGHEGLTEQAEQVFNRMKAR 311
Query: 224 SELFLCFSFQ-LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+S+ L N +A M+ + G+ P+ +TYT L+ Y + GD++
Sbjct: 312 GVQPNSYSYTALINAYAERRCPEKAARA-FEMIRKQGVNPTVETYTALLDAYRRAGDLEM 370
Query: 283 VR---RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
V+ + + G Y+ I+ A G Y + I F N
Sbjct: 371 VQAVWKSMKVEGCVATRVTYMTILDAF--QKQGRYKEARDLIEEFKN------------- 415
Query: 340 AGLEPSAQTYTKLMCGYAKHG 360
G +P Y L+ Y + G
Sbjct: 416 QGHKPDLMVYNMLLNSYMRGG 436
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 89/204 (43%), Gaps = 17/204 (8%)
Query: 82 DISHYNALLRVYLD---NEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
++ YNAL+ YL+ + ++E+ G+ P+ VT+ + L+ Y +G
Sbjct: 243 NVGTYNALITGYLEAKPKRQFVVAEGLIEEMEASGLYPDVVTF------TMLLGAYGHEG 296
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
E A ++ M+ + + + ALI +++ A M+ + G+ P+ +TYT
Sbjct: 297 LTEQAEQVFNRMKARGVQPNSYSYTALINAYAERRCPEKAARAFEMIRKQGVNPTVETYT 356
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL----VSSDMASAEGILTM 254
L+ Y + GD++ ++ S+K + C + ++T + IL A ++
Sbjct: 357 ALLDAYRRAGDLEMVQAVWKSMKVEG----CVATRVTYMTILDAFQKQGRYKEARDLIEE 412
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHG 278
G +P Y L+ Y + G
Sbjct: 413 FKNQGHKPDLMVYNMLLNSYMRGG 436
>gi|449445200|ref|XP_004140361.1| PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
mitochondrial-like [Cucumis sativus]
Length = 517
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 101/240 (42%), Gaps = 18/240 (7%)
Query: 125 ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
I+ S ++ + G+I ++ E M ++ F + ++ I H + + A ++
Sbjct: 278 IAYSLIVYAKVKTGSITSTWEVFEEMSERGFQANSFIYTLFIGVHCRGGKVEEAHCLMQE 337
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
M GL+P +T+ L+ G A G + I + + + L C F + I D
Sbjct: 338 MENMGLKPYPETFNLLIEGCAISGHSEEILSMCEKMLERGFLPSCSVFNVAIDKICEKGD 397
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN---GDYLD 301
+ A +LT++ G P TYT L+ GY K G++ + +L + G+ L++ +
Sbjct: 398 VKKANALLTILLDKGFLPDETTYTNLIIGYRKSGEIQEILKLYYEMGARLLSPGVSVFFA 457
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+I +L SG E ++ IV + L P Y L+ Y K G+
Sbjct: 458 LIGSLCQSGRLEEAEKYLKIV---------------KDSSLTPCLSIYQALILLYLKKGN 502
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 60/154 (38%), Gaps = 22/154 (14%)
Query: 56 EPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIE 115
E L G LP F+V ++ D+ NALL + LD +G
Sbjct: 371 EKMLERGFLPSCSVFNVAIDKICEKGDVKKANALLTILLD----------------KGFL 414
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
P+ TY + LI Y + G I+ K+ M + VF ALI Q+ +
Sbjct: 415 PDETTY------TNLIIGYRKSGEIQEILKLYYEMGARLLSPGVSVFFALIGSLCQSGRL 468
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 209
AE L ++ + L P Y L+ Y K G+
Sbjct: 469 EEAEKYLKIVKDSSLTPCLSIYQALILLYLKKGN 502
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 110/498 (22%), Positives = 202/498 (40%), Gaps = 77/498 (15%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
D LD+ Y +++ D++ + KL++ G PN V Y + +I +
Sbjct: 357 FDEALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAY------TAVIDGLLK 410
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G IE K E M + + + +I G +A + A + M Q G P T
Sbjct: 411 AGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTIT 470
Query: 197 YTKLMCGYAKHGDMDSIK-------TKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS-A 248
YT L+ G++K MD + TK P +P + + L DM + A
Sbjct: 471 YTTLIDGFSKASKMDEARKLLDVMLTKGP--EPTAVTYGSIVHGFCKL------DMINEA 522
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHA 305
+ ++ M + G EP +T L+ Y G + ++L + + D Y +I
Sbjct: 523 KEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDL 582
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS- 364
L +G V H + M + G P A TY ++ ++K G++++
Sbjct: 583 LFSTGR-------------VPEARHVFDS--MIEKGCAPDALTYGTIIQNFSKIGNVEAA 627
Query: 365 --IRRLLAQNG--------SSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADA 414
I L+A++G +SL++G Y+ + G Y + S I+P +A
Sbjct: 628 GEILELMAKSGVGPDCFAYNSLMDG-YVKLER--VDQAFGVYDRMVASGIKP----NAVT 680
Query: 415 ANHIYH-LINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG-VGYSADA 472
N + H L G+ D A+ + + + +++P LV + + + G G ++A
Sbjct: 681 FNVLMHGLFKDGKTDRAFSLFKEM-----LEKDEVPPT--LVSYTILIDGLGKAGRVSEA 733
Query: 473 ANHIYHLINKGQIDAAY---RIVNTLARSANINGEQLPVGGFLVRHMVK--TNQPIDKVL 527
+ +I++G I + ++ +LA++ I P LV MVK N +
Sbjct: 734 FSQFQEMIDRGIIPECHTYTSLIYSLAKAGRI-----PEAKKLVEDMVKLGVNPDVQAYS 788
Query: 528 AVCHRLTDENLHPRAFNL 545
A+ L D ++ A+++
Sbjct: 789 ALITGLIDSSMVDTAWDV 806
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 185/467 (39%), Gaps = 63/467 (13%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL-EFMRDKTFPISEGVFNALIYGHS 170
Q + +V ++ NS L+ YC+ G ++ K+L + + FP + +N L+ G S
Sbjct: 253 QTVVAKKVATSRVAYNS-LMDGYCKLGRVDDGLKLLLQMVECDNFPDIQ-TYNILVAGFS 310
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+AN + A + ++S G +P+A TYT ++ G M+ K E
Sbjct: 311 RANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFF------DEALDVI 364
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSVRRLLAQ 289
S+ + S + A + + AG P+ YT ++ G K G + D ++
Sbjct: 365 SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDM 424
Query: 290 SGSSLV--NGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
SGSS V Y +I L + + + + M Q G P
Sbjct: 425 SGSSCVPTRTTYTVVIDGLC---KAQMLPDACKVF------------EQMVQKGCVPDTI 469
Query: 348 TYTKLMCGYAKHGDMDSIRRLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI 404
TYT L+ G++K MD R+LL G Y I+H E+I+++
Sbjct: 470 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 529
Query: 405 -----QPGVGYSADAANHIYHLINKGQIDAAYRIVNTL-ARSAN-------------ING 445
+PG+ + + + ++KG+ + AY+++ + AR +
Sbjct: 530 RERGCEPGLFI---FTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFST 586
Query: 446 EQLPVGGFLVRHMVKTNQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSANIN 502
++P + M++ G + DA + I + G ++AA I+ +A+S
Sbjct: 587 GRVPEARHVFDSMIEK-----GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG--V 639
Query: 503 GEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLI 549
G L+ VK + +D+ V R+ + P A VL+
Sbjct: 640 GPDCFAYNSLMDGYVKLER-VDQAFGVYDRMVASGIKPNAVTFNVLM 685
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 140/386 (36%), Gaps = 59/386 (15%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E D DI YN L+ + + L S G +PN TY +I
Sbjct: 292 ECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQ--------- 342
Query: 136 QDGNIEGATKILE---FMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ A ++ E F + IS + +I G + + + A + + AG P
Sbjct: 343 ---GLYDAQRMEEAKAFFDEALDVIS---YTTVIKGLADSKRIDEACELFEKLKTAGCSP 396
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDM-ASA 248
+ YT ++ G K G ++ + S C + T ++ L + M A
Sbjct: 397 NVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSS----CVPTRTTYTVVIDGLCKAQMLPDA 452
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHA 305
+ M Q G P TYT L+ G++K MD R+LL G Y I+H
Sbjct: 453 CKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHG 512
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
+ I+E ++ M + G EP +T L+ Y G +
Sbjct: 513 FC---KLDMINEAKEVI------------AQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 557
Query: 366 RRLLAQNGSSLVNGD---YLDIIHALAVSGH----GEYIDEIISKIQPGVGYSADAANH- 417
++L + + D Y +I L +G D +I K G + DA +
Sbjct: 558 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK-----GCAPDALTYG 612
Query: 418 --IYHLINKGQIDAAYRIVNTLARSA 441
I + G ++AA I+ +A+S
Sbjct: 613 TIIQNFSKIGNVEAAGEILELMAKSG 638
Score = 46.2 bits (108), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 99/283 (34%), Gaps = 56/283 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ + N +L + ++ S G EP V+Y +IS I K ++
Sbjct: 19 DVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDK------MD 72
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K M D F LI+G +A +L + P YT ++
Sbjct: 73 EAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVI 131
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K GD+D+ F+ IL M AG
Sbjct: 132 HGYCKAGDLDT------------------GFK-----------------ILEEMLAAGCI 156
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVSA 320
P A Y L+ K G +D L + S GDY+ + + A+S HG+ +DE
Sbjct: 157 PDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGK-LDEA-- 213
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
C + E M + G EP + L+ K G +D
Sbjct: 214 -------CELYRE---MIERGYEPYLEVQDSLIFALCKAGKVD 246
Score = 46.2 bits (108), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 118/281 (41%), Gaps = 37/281 (13%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ ++ G + VT+ LI + +S + G ++ A ++ M ++ + V +
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLI---EALSNH---GKLDEACELYREMIERGYEPYLEVQD 233
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
+LI+ +A + A I + + S Y LM GY K G +D LK
Sbjct: 234 SLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDD------GLKLL 287
Query: 224 SELFLCFSF---QLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
++ C +F Q N+L+ ++ + A + ++S G +P+A TYT ++ G
Sbjct: 288 LQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDA 347
Query: 278 GDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
M+ + ++ + Y +I LA S + IDE + F L+
Sbjct: 348 QRMEEAKAFFDEALDVI---SYTTVIKGLADS---KRIDEACEL-------FEKLK---- 390
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDM-DSIRRLLAQNGSSLV 377
AG P+ YT ++ G K G + D ++ +GSS V
Sbjct: 391 -TAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCV 430
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 140/343 (40%), Gaps = 37/343 (10%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P + +N L+ + S ++ +G+ P V++ LIS C+ G
Sbjct: 139 PPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGC------CKAGA 192
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+E ++ M + F+ALI G + + + M GL P+ T+T
Sbjct: 193 VEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTV 252
Query: 200 LMCGYAKHGDMD-SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G K G +D ++K L L L N L V D+ A ++ MS +
Sbjct: 253 LIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKV-GDLKEARRLVNEMSAS 311
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGH---G 312
GL P T+T L+ G K+GDM+S ++R + + G L + + +I L G
Sbjct: 312 GLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDA 371
Query: 313 EYI--DEVSA------------IVCF-----VNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
E + D +SA + CF V + F L+ M G P TY LM
Sbjct: 372 ERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLK--EMQSDGHVPGVVTYNALM 429
Query: 354 CGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEY 396
G K G + + + LL + V + DI + + + GH ++
Sbjct: 430 NGLCKQGQVKNAKMLLDAMLNVGVAPN--DITYNILLEGHSKH 470
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 130/308 (42%), Gaps = 35/308 (11%)
Query: 152 DKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 211
D +P + FN L++G + + SA + + + GL P+ ++ L+ G K G ++
Sbjct: 135 DSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVE 194
Query: 212 S---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYT 268
+K + S + ++F FS + L D S + M GL P+ T+T
Sbjct: 195 EGFRLKGVMESERVCPDVFT-FSALINGLCKEGRLDEGSL--LFDEMCGKGLVPNGVTFT 251
Query: 269 KLMCGYAKHGDMD----SVRRLLAQS-GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVC 323
L+ G K G +D + + +LAQ LV Y +I+ L G + E +V
Sbjct: 252 VLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVT--YNALINGLCKVGD---LKEARRLV- 305
Query: 324 FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGD 380
MS +GL P T+T L+ G K+GDM+S I+R + + G L +
Sbjct: 306 -----------NEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVA 354
Query: 381 YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
+ +I L G + ++ + G+ D + + KG + ++++ +
Sbjct: 355 FTVLISGLCRDGRVHDAERMLRDML-SAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEM 413
Query: 438 ARSANING 445
++ G
Sbjct: 414 QSDGHVPG 421
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 6/197 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YNAL+ + ++ + G+ P+R+T+ LI C+ G++E
Sbjct: 281 DLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGC------CKYGDME 334
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I M ++ + + F LI G + + AE +L M AG +P TYT ++
Sbjct: 335 SALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVV 394
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+ K G++ + ++ + ++ + + +A+ +L M G+
Sbjct: 395 DCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVA 454
Query: 262 PSAQTYTKLMCGYAKHG 278
P+ TY L+ G++KHG
Sbjct: 455 PNDITYNILLEGHSKHG 471
Score = 47.4 bits (111), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + LD + L+ + L + S G +P+ TY + ++ +C
Sbjct: 345 EEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTY------TMVVDCFC 398
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ GN+ K+L+ M+ +NAL+ G + + +A+ +L M G+ P+
Sbjct: 399 KKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDI 458
Query: 196 TYTKLMCGYAKHG 208
TY L+ G++KHG
Sbjct: 459 TYNILLEGHSKHG 471
>gi|326503836|dbj|BAK02704.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 399
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 122/287 (42%), Gaps = 28/287 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y ++ VY ++ S +++S G + N TY + L++ + ++G E A +
Sbjct: 87 YTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTY------TALVNAFAREGLCEKAEE 140
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M+ +NAL+ +S+A +A I ++M G EP +Y L+ Y
Sbjct: 141 VFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASYNILVDAYG 200
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G + SLK Q S L S ++A E ++ + ++GL P
Sbjct: 201 RAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLAPDTI 260
Query: 266 TYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
++ Y + G +D + RLLA + G+ V G Y ++A +G Y++ + A
Sbjct: 261 ALNAMLNAYGRAGRLDDMERLLAAMERRGTRDV-GTYNVAVNAYGRAG---YLERMEAA- 315
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
F LE + GL T+T M YA+ + RR L
Sbjct: 316 ------FASLE-----RRGLAADVVTWTSRMGAYARKKE---YRRCL 348
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 137/337 (40%), Gaps = 35/337 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y LLR Y ++++ GI P+ Y + L+ C E A +
Sbjct: 17 YALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNAYLDG--LLKARC----AEKAVE 70
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M+ + + + +I + ++ SA + M G + + TYT L+ +A
Sbjct: 71 VYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIGCKANICTYTALVNAFA 130
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA---SAEGILTMMSQAGLEP 262
+ G + + ++ +++ N L+ S +A I ++M G EP
Sbjct: 131 REGLCEKAEEVFEEMQQAGHEPDVYAY---NALMEAYSRAGFPQAASEIFSLMQHMGCEP 187
Query: 263 SAQTYTKLMCGYAK---HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
+Y L+ Y + H + ++V L + G + ++ ++ A A SG+ +EV
Sbjct: 188 DRASYNILVDAYGRAGLHREAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVM 247
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSSL 376
A + ++GL P ++ Y + G +D + RLLA + G+
Sbjct: 248 A---------------QLHKSGLAPDTIALNAMLNAYGRAGRLDDMERLLAAMERRGTRD 292
Query: 377 VNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSAD 413
V G Y ++A +G+ E ++ + ++ G +AD
Sbjct: 293 V-GTYNVAVNAYGRAGYLERMEAAFASLER-RGLAAD 327
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 118/300 (39%), Gaps = 27/300 (9%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
+ A LE++ + P TY + L+ YC G++ A ++ MR+ P S V+NA
Sbjct: 2 YAALLEARCV-PTEDTY------ALLLRAYCTAGSLHRAEGVISEMREHGIPPSATVYNA 54
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD-MDSIKTKIPSLKPQ 223
+ G +A A + M + + +TYT ++ Y K M ++K
Sbjct: 55 YLDGLLKARCAEKAVEVYQRMKRERCRTNTETYTLMINVYGKSKQPMSAMKVFKEMQSIG 114
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---DM 280
+ +C L N AE + M QAG EP Y LM Y++ G
Sbjct: 115 CKANICTYTALVNAFAR-EGLCEKAEEVFEEMQQAGHEPDVYAYNALMEAYSRAGFPQAA 173
Query: 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
+ L+ G Y ++ A +G + V F L+ +
Sbjct: 174 SEIFSLMQHMGCEPDRASYNILVDAYGRAGLHREAEAV----------FESLK-----RQ 218
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEI 400
G+ P+ +++ L+ +A+ G++ ++AQ S + D + + L G +D++
Sbjct: 219 GMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAMLNAYGRAGRLDDM 278
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/244 (18%), Positives = 103/244 (42%), Gaps = 13/244 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YNAL+ Y + ++ + ++ G EP+R +Y + L+ Y + G
Sbjct: 153 DVYAYNALMEAYSRAGFPQAASEIFSLMQHMGCEPDRASY------NILVDAYGRAGLHR 206
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + E ++ + + L+ H+++ ++A E ++ + ++GL P ++
Sbjct: 207 EAEAVFESLKRQGMAPTMKSHMLLLAAHARSGNVARCEEVMAQLHKSGLAPDTIALNAML 266
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
Y + G +D ++ + +++ + + ++ + + + E + + GL
Sbjct: 267 NAYGRAGRLDDMERLLAAMERRGTRDV-GTYNVAVNAYGRAGYLERMEAAFASLERRGLA 325
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHA---LAVSGHGEYIDEV 318
T+T M YA+ + RR L + G Y D A +A +++V
Sbjct: 326 ADVVTWTSRMGAYARKKE---YRRCLEIFEEMVDAGCYPDAGTAKVLVAACSDERQVEQV 382
Query: 319 SAIV 322
+AIV
Sbjct: 383 TAIV 386
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 149/375 (39%), Gaps = 63/375 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY------- 134
D YN ++ + + T L +++ + I P+ +TY LI +S++
Sbjct: 212 DTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLF 271
Query: 135 ----------------------CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
C++G +E A +I+ +M +K +E +N ++ G+
Sbjct: 272 LEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLR 331
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELF 227
M A I M G+EP +YT L+ GY + MD + LKP +
Sbjct: 332 GQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPS--IV 389
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG----DMDSV 283
C S L L + ++ A M AG P+ T+ L+ GY K+G M
Sbjct: 390 TC-SVLLRGLFEVGRTECAKI--FFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHF 446
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
+L + + + Y +I+ L +G +D+ A F L P++ GL
Sbjct: 447 HKLERRREDTNIQ-IYTAVINGLCKNGK---LDKAHAT-------FEKL--PLI---GLH 490
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGSSLVNGDYLDIIHALAVSGHGEYIDEI 400
P TYT ++ GY + G +D + +L + NG N Y I+ S +
Sbjct: 491 PDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAF 550
Query: 401 ISKIQPGVGYSADAA 415
+ +I G +S +AA
Sbjct: 551 LKEI-AGKSFSFEAA 564
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 55/264 (20%)
Query: 98 HTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPI 157
HT D L +E +P+ Y + +I +C+DG ++GAT +L M+ K P
Sbjct: 193 HTQKAFDLLRLMEQGITKPDTCIY------NIVIDAFCKDGMLDGATSLLNEMKQKNIPP 246
Query: 158 SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI 217
+ +LI G + + + M + P T+ ++ G K G ++
Sbjct: 247 DIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVE------ 300
Query: 218 PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
AE I+T M + G+EP+ TY +M GY
Sbjct: 301 -----------------------------DAEEIMTYMIEKGVEPNEITYNVVMDGYCLR 331
Query: 278 GDMDSVRRLLAQSGSSLVNGDYLDIIHALA-VSGHGEYIDEVSAIVCFVNICFHWLEGPM 336
G M RR+ S + G DII A ++G+ E A+ F I
Sbjct: 332 GQMGRARRIF---DSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREI--------- 379
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHG 360
SQ GL+PS T + L+ G + G
Sbjct: 380 -SQNGLKPSIVTCSVLLRGLFEVG 402
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 93/254 (36%), Gaps = 35/254 (13%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S +++ C + +L K P +E F LI G N + A + + +
Sbjct: 111 STVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVR 170
Query: 188 AGL-EPSAQTYTKLMCGYAKHGD----MDSIKTKIPSL-KPQSELFLCFSFQLTNLLI-- 239
+ EP Y +M G K G D ++ + KP + ++ N++I
Sbjct: 171 ENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIY--------NIVIDA 222
Query: 240 -LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD 298
+ A +L M Q + P TYT L+ G K + VR L + + D
Sbjct: 223 FCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPD 282
Query: 299 ---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCG 355
+ +I L G E +E+ M + G+EP+ TY +M G
Sbjct: 283 VCTFNSVIDGLCKEGKVEDAEEIMT---------------YMIEKGVEPNEITYNVVMDG 327
Query: 356 YAKHGDMDSIRRLL 369
Y G M RR+
Sbjct: 328 YCLRGQMGRARRIF 341
>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g35130-like [Cucumis sativus]
Length = 576
Score = 70.5 bits (171), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 151/382 (39%), Gaps = 53/382 (13%)
Query: 40 VLLVLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNE-H 98
++ V + + LN KW GP L CE + T DV + YN L+ Y +
Sbjct: 122 IISVAVQLRLNKKW------GPIILICEWIMNKSTFRPDVIV----YNLLMDAYGQRSLY 171
Query: 99 TFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPIS 158
+ +L LES I P TY + L+ YC+ G +E A + MR S
Sbjct: 172 KDVESTYLELLESHCI-PTEDTY------ALLLKAYCKSGLLEKAEAVFAEMRKYGLSPS 224
Query: 159 EGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD-------MD 211
V+NA I G + + A I M + G +P+ TYT L+ Y K D
Sbjct: 225 AIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESKSHMAQNIFD 284
Query: 212 SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
++T+ KP +C L N L AE I M +AG EP Y LM
Sbjct: 285 EMRTQ--RCKPN----ICTFTALVNALAR-EGLCEKAEEIFEQMQEAGYEPDVYAYNALM 337
Query: 272 CGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNIC 328
Y++ G + L+ G Y ++ A +G E + A+
Sbjct: 338 ESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHE---DAQAVF------ 388
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHAL 388
M + G+ P+ +++ L+ Y+ G++ ++ Q S + D + L
Sbjct: 389 ------EEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSML 442
Query: 389 AVSGH-GEY--IDEIISKIQPG 407
+ G G++ ++++ S +Q G
Sbjct: 443 NLYGRLGQFGKMEDLFSTMQKG 464
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 192 DVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF------TTLIDGHCKNGRVD 245
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N L YG + D+ A ++ MS GL+P TYT L+
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 305
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELF--------LCFSFQLTNLLILVSSDMASAEGILT 253
G K GDM++ + + Q + + ++ ++ L S AE +L
Sbjct: 306 DGCCKEGDMET------AFEHQKRMIQENIRLDDVVYTALISGLCQEGRS--VDAEKMLR 357
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
M GL+P+ TYT ++ + K GD+ + +LL +
Sbjct: 358 EMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKE 393
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 113/252 (44%), Gaps = 42/252 (16%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS ++ LM GY + GD+D
Sbjct: 119 YPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 178
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 179 RLKNAMHASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLDKGLVPNGVTFTTLI 235
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y + + L G + IDE
Sbjct: 236 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDE------- 288
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI----RRLLAQNGSSLVNGD 380
MS GL+P TYT L+ G K GDM++ +R++ +N + D
Sbjct: 289 ------------MSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQEN----IRLD 332
Query: 381 YLDIIHALAVSG 392
D+++ +SG
Sbjct: 333 --DVVYTALISG 342
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 122/303 (40%), Gaps = 32/303 (10%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + G+ P+ V++ L++ Y
Sbjct: 116 ECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNG------YI 169
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M ++ LI G + + M A + M GL P+
Sbjct: 170 RLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 229
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A ++ M
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEM 289
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV----RRLLAQSGSSLVNGDYLDIIHALAVSG- 310
S GL+P TYT L+ G K GDM++ +R++ + N D+++ +SG
Sbjct: 290 SMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQE------NIRLDDVVYTALISGL 343
Query: 311 --HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
G +D + M GL+P+ TYT ++ + K GD+ + +L
Sbjct: 344 CQEGRSVDAEKML-------------REMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKL 390
Query: 369 LAQ 371
L +
Sbjct: 391 LKE 393
>gi|255660950|gb|ACU25644.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 481
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I Y+AL +V L + K+ ++GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRFMMAKRYFNKMLNEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A E M+ + +N LI G+ + M AE M +EP+
Sbjct: 162 LSGKVETANXFFEDMKSRDITPDVITYNTLINGYYRVKKMEEAERYFVEMKGRNIEPTVI 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A+
Sbjct: 222 TYTTLIKGYVSVDRVDDALSLMEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEAQS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M + P+ + + KL+ G K G++D+ +L
Sbjct: 277 ILKEMVDKYIAPTDNSIFLKLISGQCKAGNLDAAADVL 314
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 73/192 (38%), Gaps = 17/192 (8%)
Query: 45 LFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTD 104
+F+ L S C GNL L VP + HY L+ Y E +
Sbjct: 293 IFLKLISGQCK-----AGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAEKYDKAVN 347
Query: 105 FLAKLESQGI--EPNRVTYQQLISNSKLISKYCQDGNIEGA-TKILEFMRDKTFPISE-G 160
L KL + I P + + + + +I C +G A T + + M+ + E
Sbjct: 348 LLDKLIEKDIILRPQSTLHMEPSAYNPMIEYLCDNGQTAKAETLVRQLMK---LGVQEPT 404
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
N LI GHSQ SA +L +M + ++ Y L+ Y K + K + S+
Sbjct: 405 ALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSM 464
Query: 221 -----KPQSELF 227
P S LF
Sbjct: 465 IENGHLPDSSLF 476
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 24/217 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y A++ Y + L++++ QG+ PN TY + LI +C+ GN
Sbjct: 364 NVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTY------TTLIDGHCKVGNFV 417
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++++ M + F + +NA+I G + + A +L +S GL+ TYT LM
Sbjct: 418 RAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILM 477
Query: 202 CGYAKHGDMDS--------IKTKI-PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ + D + +K P + + L F Q M +E +
Sbjct: 478 SVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQ---------KQMKESERLF 528
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
GL P+ +TYT ++CGY ++G+ +L +
Sbjct: 529 EEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQR 565
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 107/274 (39%), Gaps = 38/274 (13%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL + S G +PN TY + +I+ YC++ + A +L M+++ + +
Sbjct: 352 FLKLVRSDGYKPNVHTY------TAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTT 405
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPS 219
LI GH + + A ++ +M + G P+ TY ++ G K G +D K +
Sbjct: 406 LIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHG 465
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
L+ ++ + + +D + M + G P +YT L+ + +
Sbjct: 466 LQADG-----VTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQ 520
Query: 280 MDSVRRLLAQSGSSLVNGDYLDII-----HALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
M RL ++ S L +I + + G+ Y + A+ F
Sbjct: 521 MKESERLFEEAVS-------LGLIPTKKTYTSMICGYCRYGNTSLAVKLF---------- 563
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
MS G P + TY L+ G K +D R L
Sbjct: 564 QRMSNHGCAPDSITYGALISGLCKESKLDDARNL 597
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 117/286 (40%), Gaps = 40/286 (13%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
+ K+ G+ PN + + + LI+ C+ G+I+ A ++LE M + + +
Sbjct: 281 YFWKMVEMGLAPNVINF------TALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTT 334
Query: 165 LIYGHSQANDMASA-EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
LI G + A L ++ G +P+ TYT ++ GY K ++ + + ++ Q
Sbjct: 335 LIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQ 394
Query: 224 SELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
L + LI + A ++ +M + G P+ TY ++ G K G +
Sbjct: 395 G---LVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSL 451
Query: 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF---------------V 325
D RLL + + D + + + +S H D ++V F
Sbjct: 452 DEAYRLLNKVSVHGLQAD--GVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYT 509
Query: 326 NICFHWLEGPMMSQA----------GLEPSAQTYTKLMCGYAKHGD 361
+ + M ++ GL P+ +TYT ++CGY ++G+
Sbjct: 510 TLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGN 555
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 117/341 (34%), Gaps = 94/341 (27%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ ++ +G+ P+ V+++ ++ C G + A K L M ++ F +
Sbjct: 210 NMFVEMCQRGVSPDCVSFKLMVVAC------CNMGRVLEAEKWLNAMVERGFIVDNATCT 263
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
+I Q + G M + GL P+ +T L+ G K G S+K
Sbjct: 264 LIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQG----------SIKQA 313
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
EL L M + G +P+ T+T L+ G K G +
Sbjct: 314 FEL-------------------------LEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKA 348
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
RL + LV D G +
Sbjct: 349 FRLFLK----LVRSD------------------------------------------GYK 362
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSSLVNGDYLDIIHALAVSGHGEYIDEI 400
P+ TYT ++ GY K ++ LL+ + G Y +I G+ E+
Sbjct: 363 PNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYEL 422
Query: 401 ISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+ + G+S + + I L KG +D AYR++N ++
Sbjct: 423 MD-LMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVS 462
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI Y L+ + + + S G+ P + TY + +I YC+ GN
Sbjct: 504 DIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTY------TSMICGYCRYGNTS 557
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ + M + + ALI G + + + A + M GL P T L
Sbjct: 558 LAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLA 617
Query: 202 CGYAKHGD 209
Y K D
Sbjct: 618 YEYCKKDD 625
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 127/339 (37%), Gaps = 46/339 (13%)
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
++ LE + + ++ +A++G + + ++ Q L S Q N ++ V+
Sbjct: 144 LIGNKNLERANEVMQCMVMNFAENGKLKEAVNMVVEMQNQG---LVXSTQTLNCVLDVAV 200
Query: 244 DMA---SAEGILTMMSQAGLEPSAQTYTKLM----CGYAKHGDMDSVRRLLAQSGSSLVN 296
M AE + M Q G+ P ++ KLM C + + + + + G + N
Sbjct: 201 GMGLVEIAENMFVEMCQRGVSPDCVSF-KLMVVACCNMGRVLEAEKWLNAMVERGFIVDN 259
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY 356
II A G Y++ V + + W M + GL P+ +T L+ G
Sbjct: 260 ATCTLIIDAFCQKG---YVNRV--------VGYFW----KMVEMGLAPNVINFTALINGL 304
Query: 357 AKHGDMDSIRRLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSAD 413
K G + LL + G + +I L G E + K+ GY +
Sbjct: 305 CKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPN 364
Query: 414 AANHIYHLINKGQIDAAYR-------------IVNTLARSANINGEQLPVGGFLVRHMVK 460
+ + + D R + NT + I+G VG F+ + +
Sbjct: 365 VHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDG-HCKVGNFVRAYELM 423
Query: 461 TNQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 496
G+S + + I L KG +D AYR++N ++
Sbjct: 424 DLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVS 462
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 136/336 (40%), Gaps = 30/336 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+++ ++ +N ++ V FL +ES GI+P VTY L+ Y
Sbjct: 219 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQG------YS 272
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G IEGA I+ M+ K F +N ++ S + A +L M GL P +
Sbjct: 273 LRGRIEGARMIISEMKSKGFQPDLQTYNPIL---SWMCNEGRASEVLREMKGIGLVPDSV 329
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
+Y L+ G + +GD+++ + Q + +++ + + + + +AE ++ +
Sbjct: 330 SYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 389
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHG 312
+ G+ + TY ++ GY +HGD L + G Y +I+ L
Sbjct: 390 REKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKT 449
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
DE+ F + G G++P LM G+ G+MD LL +
Sbjct: 450 READEL----------FEKVVG-----KGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEM 494
Query: 373 GSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQ 405
++ D Y ++ L G E E++ +++
Sbjct: 495 DRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMK 530
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 143/339 (42%), Gaps = 48/339 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN +L ++ NE S + L +++ G+ P+ V+Y LI +G++E
Sbjct: 295 DLQTYNPILS-WMCNEGRAS--EVLREMKGIGLVPDSVSYNILIRGCS------NNGDLE 345
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M + + +N LI+G N + +AE ++ + + G+ + TY ++
Sbjct: 346 TAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVI 405
Query: 202 CGYAKHGDM-------DSIKTKIPSLKPQSELFLCFSFQLTNLLILVS--SDMASAEGIL 252
GY +HGD D + T +KP F T+L+ ++ + A+ +
Sbjct: 406 NGYCQHGDAKKAFALHDEMMTD--GIKPTQ-------FTYTSLIYVLCRRNKTREADELF 456
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVS 309
+ G++P LM G+ G+MD LL + ++ D Y ++ L
Sbjct: 457 EKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGE 516
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IR 366
G E E+ M + G++P +Y L+ GY+K GD +R
Sbjct: 517 GKFEEARELMG---------------EMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVR 561
Query: 367 RLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
+ G + Y ++ L+ + GE +E++ +++
Sbjct: 562 DEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMK 600
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 88/227 (38%), Gaps = 44/227 (19%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +L+ V T + K+ +G++P+ L+ + L+ +C GN++ A
Sbjct: 436 YTSLIYVLCRRNKTREADELFEKVVGKGMKPD------LVMMNTLMDGHCATGNMDRAFS 489
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M + +N L+ G A ++ M + G++P +Y L+ GY+
Sbjct: 490 LLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYS 549
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K GD T +V +M S G P+
Sbjct: 550 KKGD-------------------------TKHAFIVRDEMLS----------LGFNPTLL 574
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLV---NGDYLDIIHALAVS 309
TY L+ G +K+ D + LL + S + + + +I A++ S
Sbjct: 575 TYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKS 621
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/252 (18%), Positives = 103/252 (40%), Gaps = 26/252 (10%)
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
+F+ ++ + Q + A +M + G +P +T ++ ++ +++ +
Sbjct: 158 LFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADM 217
Query: 221 KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
++F + ++ + A+G L +M G++P+ TY L+ GY+ G +
Sbjct: 218 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRI 277
Query: 281 DSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHG-EYIDEVSAIVCFVNICFHWLEGPM 336
+ R ++++ S D Y I+ + G E + E+ I
Sbjct: 278 EGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGI--------------- 322
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
GL P + +Y L+ G + +GD+++ R + + G Y +IH L +
Sbjct: 323 ----GLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENK 378
Query: 394 GEYIDEIISKIQ 405
E + +I +I+
Sbjct: 379 IEAAEILIREIR 390
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 126/309 (40%), Gaps = 40/309 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y AL+ YL + + + S+G PN VTY S LI +C+ G +E
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY------SALIDGHCKAGQVE 605
Query: 142 GATKILEFM-RDKTFPISEGVFN---------------ALIYGHSQANDMASAEGILTMM 185
A +I E M K P + F AL+ G +++ + A +L M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 186 SQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
S G EP+ Y L+ G K G +D +KT++ + L+ +S + +
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT-YSSLIDRYFKVKR 724
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI 302
D+AS +L+ M + P+ YT+++ G K G D +L+ + +
Sbjct: 725 QDLASK--VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV--V 780
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ + G G ++ + C LE M G+ P+ TY L+ K+G +
Sbjct: 781 TYTAMIDGFG--------MIGKIETCLELLE--RMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 363 DSIRRLLAQ 371
D LL +
Sbjct: 831 DVAHNLLEE 839
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 150/363 (41%), Gaps = 59/363 (16%)
Query: 67 EDPFSV---HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFL-AKLESQGIEPNRVTYQ 122
E FSV G+ +P D S Y+ +L YL N L +++ G+ + TY
Sbjct: 465 EKAFSVIREMIGQGFIP-DTSTYSKVLN-YLCNASKMELAFLLFEEMKRGGLVADVYTY- 521
Query: 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGIL 182
+ ++ +C+ G IE A K MR+ + + ALI+ + +A ++ A +
Sbjct: 522 -----TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 183 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTN--- 236
M G P+ TY+ L+ G+ K G ++ I ++ K ++ + F N
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 237 --------LL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SV 283
LL S + A +L MS G EP+ Y L+ G K G +D V
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 284 RRLLAQSG--------SSLVNGDYLDIIHALAVSGHGEYIDEVSA--IVCFVNICFHWLE 333
+ +++ G SSL++ + LA + ++ A +V + + ++
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM----ID 752
Query: 334 G--------------PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG 379
G MM + G +P+ TYT ++ G+ G +++ LL + GS V
Sbjct: 753 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812
Query: 380 DYL 382
+Y+
Sbjct: 813 NYV 815
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 16/234 (6%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNAL+ + + ++ P +FL ++ + ++ + + ++ L+ K+C++G+ A +
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIR----DDDKEVFGEFLN--VLVRKHCRNGSFSIALE 221
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
L ++D F S +N LI +A+ + SA I MS A L T
Sbjct: 222 ELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLC 281
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPS 263
K G T + ++E F+ + T L+ + +S A L M P+
Sbjct: 282 KVGKWREALTLV-----ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 336
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEY 314
TY+ L+CG + +R+L G + ++HA SG Y
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSY 390
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 6/142 (4%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P + Y++L+ Y + + L+K+ PN V Y ++I C+ G
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDG------LCKVGK 759
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A K+++ M +K + + A+I G + + +L M G+ P+ TY
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 200 LMCGYAKHGDMDSIKTKIPSLK 221
L+ K+G +D + +K
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMK 841
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 134/321 (41%), Gaps = 40/321 (12%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
G+ D + + +++ YN ++ + H + + + G +P+ VTY
Sbjct: 288 GDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTY 347
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
LIS S C+DG + A ++LE K ++ + LI+ + + A
Sbjct: 348 NTLISGS------CRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNW 401
Query: 182 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKI--PSLKPQSELF------LCF 230
L M++ G +P TY L+ G G++D +I+ K+ + P + ++ LC
Sbjct: 402 LIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCK 461
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
F+L +A+ +L M + P A Y L+ G+ ++G++D R+L +
Sbjct: 462 KFKL-----------PAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELT 510
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYT 350
+N + + + G+ ++ A+ C M + L P TY+
Sbjct: 511 IEKGMNPGIVG--YNAMIKGYCKFGMMKDAMACI----------NRMKKRHLAPDEFTYS 558
Query: 351 KLMCGYAKHGDMDSIRRLLAQ 371
++ GY K D+D +++ +
Sbjct: 559 TVIDGYVKQHDLDGAQKMFRE 579
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 112/281 (39%), Gaps = 18/281 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN L+ + L + +G+ PN+ +Y + LI YC+ G +
Sbjct: 343 DIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSY------TPLIHAYCKQGGYD 396
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A+ L M ++ + AL++G A ++ A I M + G+ P A Y LM
Sbjct: 397 RASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILM 456
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K + + K + + QS L F + + + ++ A + + + G+
Sbjct: 457 SGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMN 516
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P Y ++ GY K G M + + + D + ++ + G+ + D A
Sbjct: 517 PGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPD--EFTYSTVIDGYVKQHDLDGAQ 574
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
F M + +P+ TYT L+ G+ + GD+
Sbjct: 575 KMFRE----------MVKMKCKPNVVTYTSLINGFCRKGDL 605
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 114/285 (40%), Gaps = 37/285 (12%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
QG PN + Y LI YC+ G++E A + ++ K F + + A+I G +
Sbjct: 233 QGCIPNIIFYNTLIDG------YCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCK 286
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
D + + +L M+ GL + Q Y ++ KHG I + +++ E
Sbjct: 287 KGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHG---HIVKAVETIEGMIECGCKPD 343
Query: 232 FQLTNLLILVSS---DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
N LI S ++ A+ +L GL P+ +YT L+ Y K G D L
Sbjct: 344 IVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLI 403
Query: 289 QSGSSLVNGD---YLDIIHALAVSG--------------HGEYIDEVSAIVCFVNICFHW 331
+ D Y ++H L V+G G + D + +C +
Sbjct: 404 EMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKF 463
Query: 332 -------LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
L M+ Q+ L P A Y L+ G+ ++G++D R+L
Sbjct: 464 KLPAAKLLLAEMLDQSVL-PDAFVYATLVDGFIRNGNLDEARKLF 507
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+ P V Y +I YC+ G ++ A + M+ + E ++ +I G+ +
Sbjct: 513 KGMNPGIVGYNAMIKG------YCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVK 566
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC-F 230
+D+ A+ + M + +P+ TYT L+ G+ + GD+ SLK E+ C
Sbjct: 567 QHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHR------SLKIFREMQACGL 620
Query: 231 SFQLTNLLILVSS-----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ IL+ S + A M P+ T+ L+ G++K+G
Sbjct: 621 VPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNG 673
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 24/298 (8%)
Query: 101 SPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEG 160
+ T FL +E++GIEPN V Y ++ +C+ N++ A I M +K +
Sbjct: 467 AATSFLRMMENKGIEPNVVFYNN------MMLAHCRMKNMDLARSIFSEMLEKGLQPNNF 520
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
++ LI G + D +A ++ M + E + Y ++ G K G K + +L
Sbjct: 521 TYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Query: 221 KPQSELFL-CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
+ + C S+ D SA MS+ G+ P+ T+T L+ G+ K
Sbjct: 581 IKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNR 640
Query: 280 MDSVRRLLAQSGSSLVNGDYLDI-IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
MD ++ + S + LD+ + + G + D +A F +
Sbjct: 641 MDLALEMIHEMKSKDLK---LDVPAYGALIDGFCKKNDMKTAYTLFSELL---------- 687
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
+ GL P+ Y L+ G+ G MD+ + + + +G S Y +I L G+
Sbjct: 688 ELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGN 745
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 103/230 (44%), Gaps = 12/230 (5%)
Query: 84 SHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGA 143
+ YN+++ + T S + ++ GI PN VT+ + LI+ +C+ ++ A
Sbjct: 591 TSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTF------TSLINGFCKSNRMDLA 644
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+++ M+ K + + ALI G + NDM +A + + + + GL P+ Y L+ G
Sbjct: 645 LEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISG 704
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLE 261
+ G MD+ K ++ C F T ++ +L ++ A + + + G+
Sbjct: 705 FRNLGKMDAAIDLYK--KMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIV 762
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
P Y L+ G +K G ++L + + L I++ ++GH
Sbjct: 763 PDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVL--IYSTVIAGH 810
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/323 (18%), Positives = 122/323 (37%), Gaps = 59/323 (18%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P+ + +L+ + + DF ++E +G+ P++V + S +I +C++
Sbjct: 341 IPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMF------SVMIEWFCKNM 394
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQA----------ND-------------- 174
+E A +I + M+ S + + +I G +A ND
Sbjct: 395 EMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNK 454
Query: 175 ----------MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+ +A L MM G+EP+ Y +M + + +MD ++ + +
Sbjct: 455 IFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG 514
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
F++ + + D +A ++ M + E + Y ++ G K G +
Sbjct: 515 LQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 285 RLL----AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
+L + S+ Y II G D SA+ + MS+
Sbjct: 575 EMLQNLIKEKRYSMGCTSYNSIIDGFFKEG-----DTDSAVEAYRE----------MSEN 619
Query: 341 GLEPSAQTYTKLMCGYAKHGDMD 363
G+ P+ T+T L+ G+ K MD
Sbjct: 620 GISPNVVTFTSLINGFCKSNRMD 642
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 126/309 (40%), Gaps = 40/309 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y AL+ YL + + + S+G PN VTY S LI +C+ G +E
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY------SALIDGHCKAGQVE 605
Query: 142 GATKILEFM-RDKTFPISEGVFN---------------ALIYGHSQANDMASAEGILTMM 185
A +I E M K P + F AL+ G +++ + A +L M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 186 SQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
S G EP+ Y L+ G K G +D +KT++ + L+ +S + +
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYT-YSSLIDRYFKVKR 724
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI 302
D+AS +L+ M + P+ YT+++ G K G D +L+ + +
Sbjct: 725 QDLASK--VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV--V 780
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ + G G ++ + C LE M G+ P+ TY L+ K+G +
Sbjct: 781 TYTAMIDGFG--------MIGKIETCLELLE--RMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 363 DSIRRLLAQ 371
D LL +
Sbjct: 831 DVAHNLLEE 839
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 150/363 (41%), Gaps = 59/363 (16%)
Query: 67 EDPFSV---HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFL-AKLESQGIEPNRVTYQ 122
E FSV G+ +P D S Y+ +L YL N L +++ G+ + TY
Sbjct: 465 EKAFSVIREMIGQGFIP-DTSTYSKVLN-YLCNASKMELAFLLFEEMKRGGLVADVYTY- 521
Query: 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGIL 182
+ ++ +C+ G IE A K MR+ + + ALI+ + +A ++ A +
Sbjct: 522 -----TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 183 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTN--- 236
M G P+ TY+ L+ G+ K G ++ I ++ K ++ + F N
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 237 --------LL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SV 283
LL S + A +L MS G EP+ Y L+ G K G +D V
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 284 RRLLAQSG--------SSLVNGDYLDIIHALAVSGHGEYIDEVSA--IVCFVNICFHWLE 333
+ +++ G SSL++ + LA + ++ A +V + + ++
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEM----ID 752
Query: 334 G--------------PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG 379
G MM + G +P+ TYT ++ G+ G +++ LL + GS V
Sbjct: 753 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812
Query: 380 DYL 382
+Y+
Sbjct: 813 NYV 815
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 97/234 (41%), Gaps = 16/234 (6%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNAL+ + + ++ P +FL ++ + ++ + + ++ L+ K+C++G+ A +
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIR----DDDKEVFGEFLN--VLVRKHCRNGSFSIALE 221
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
L ++D F S +N LI +A+ + SA I MS A L T
Sbjct: 222 ELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLC 281
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPS 263
K G T + ++E F+ + T L+ + +S A L M P+
Sbjct: 282 KVGKWREALTLV-----ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPN 336
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEY 314
TY+ L+CG + +R+L G + ++HA SG Y
Sbjct: 337 VVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSY 390
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 6/132 (4%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P + Y++L+ Y + + L+K+ PN V Y ++I C+ G
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDG------LCKVGK 759
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A K+++ M +K + + A+I G + + +L M G+ P+ TY
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 200 LMCGYAKHGDMD 211
L+ K+G +D
Sbjct: 820 LIDHCCKNGALD 831
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 43/305 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++G + ++ A+ + +++ GL PS ++ LM GY K GD++
Sbjct: 132 YPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
M GL+P TYT L+ G K GD+++ R+ + + L + Y
Sbjct: 302 ------------MIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 382 LDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
+I L G + + E++S ++P +G N KG + +++
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLLKE 406
Query: 437 LARSA 441
+ R
Sbjct: 407 MQRDG 411
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+ PN VT+ + LI +C++G ++ A +I + M ++ +N LIYG +
Sbjct: 235 KGLVPNGVTF------TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-IKTKIPSLKPQSEL-FLC 229
D+ A+ ++ M GL+P TYT L+ G K GD+++ + + +K L +
Sbjct: 289 KGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
++ ++ L S AE +L M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 349 YTALISGLCQEGRS--VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 119/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 IMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 134/330 (40%), Gaps = 37/330 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN L+ ++ L ++ G+ P+RVTY L+ +C++G +
Sbjct: 404 NIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG------FCKEGQLN 457
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A I M F ALI G + + A GIL M + G+ T+T L+
Sbjct: 458 MAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALI 517
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K G + ++ L +F + + A +L M + GL
Sbjct: 518 DGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLV 577
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
PS T+T L+ G+ + G+ ++L Q+G S Y II+ L +G ++E
Sbjct: 578 PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR---VEEA 634
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNG-- 373
I+ MS G+ P+ TY L+ + K G +D I + +NG
Sbjct: 635 ETIL------------FSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 682
Query: 374 ------SSLVNGDYLD--IIHALAVSGHGE 395
S+L++G L I A A+S G+
Sbjct: 683 PNSHIYSALLSGFVLSNTAIGARALSSTGD 712
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 147/373 (39%), Gaps = 76/373 (20%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I +NAL+ Y S L+ +E +PN TY +L+ +SK +
Sbjct: 370 IITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK------ 423
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A +L + D +N L+ G + + A I M+ AGLEP T+T L+
Sbjct: 424 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 483
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
G K G ++ A GIL M + G+
Sbjct: 484 GLCKLGRLE-----------------------------------QANGILGSMVKKGISL 508
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHA----LAVSGHGEYIDEV 318
T+T L+ G+ K G V L ++V L H L G ++E
Sbjct: 509 DEVTFTALIDGHCKIGKAKDVCFLF----ENMVENRCLTTAHTFNCFLDALGKDYKLNEA 564
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD-SIRRL--LAQNGSS 375
+A++ G MM + GL PS T+T L+ G+ + G+ S++ L + Q G S
Sbjct: 565 NAML-----------GKMM-KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCS 612
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKIQP-GVGYSADAANHIYHL------INKGQID 428
Y II+ L +G E + I+ + GV + NH + + G++D
Sbjct: 613 PNVYTYTIIINGLCNNGRVEEAETILFSMSSFGV-----SPNHFTYAVLVKAHVKAGRLD 667
Query: 429 AAYRIVNTLARSA 441
A++IV+T+ ++
Sbjct: 668 RAFQIVSTMVKNG 680
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 119/294 (40%), Gaps = 34/294 (11%)
Query: 128 SKLISKYCQDGNIEGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMS 186
+ L+ C+ ++ A ++ E M +++ + ++ LI+G +A + A + M
Sbjct: 233 TSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV 292
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
+ G +PS +TYT L+ G D + + ++ + ++ + + +
Sbjct: 293 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIE 352
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-----------------Q 289
A G+ M + GL P T+ L+ GY K G + S +LL+
Sbjct: 353 EANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELM 412
Query: 290 SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM---------MSQA 340
G V+ Y + V +G D V+ + C EG + M+ A
Sbjct: 413 EGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC---KEGQLNMAFNIFNSMNSA 469
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALA-VSGH 393
GLEP T+T L+ G K G ++ +L GS + G LD + A + GH
Sbjct: 470 GLEPDGFTFTALIDGLCKLGRLEQANGIL---GSMVKKGISLDEVTFTALIDGH 520
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 131/326 (40%), Gaps = 34/326 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V ++ YNA + Y + L +E +G+ N VTY LI + G
Sbjct: 260 VKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHG------FSNIG 313
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
IE A ++ E MR+K V+ ++I + ++ ++ A + M+ GL PSA TY
Sbjct: 314 KIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYG 373
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMM 255
L+ G K G M++ + + ++ + + + + N LI S + A + +M
Sbjct: 374 ALIHGVCKAGQMEAAQMLVNEMQGKG---IDLNPVIFNTLIDGYCESGMVDEALRLQVVM 430
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHG 312
+ GLE Y + G K D + LL + G S + +I G+
Sbjct: 431 EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN- 489
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
FV + E M + G P+ TY L+ GY+K G+M +L
Sbjct: 490 -----------FVEAKRVFRE---MEEKGNVPNIITYNVLIDGYSKRGNMKEAHKL---- 531
Query: 373 GSSLVNGDYLDIIHALAVSGHGEYID 398
L N + ++ HGE ID
Sbjct: 532 KDELENRGLIPDVYTCTSLIHGECID 557
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 107/243 (44%), Gaps = 28/243 (11%)
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C+ G++E K+++ + K + +NA I G+ + D+ ILT+M + G+ +
Sbjct: 240 CKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNV 299
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKP---QSELFLCFSFQLTNLLILVSSDMASAEGI 251
TYT L+ G++ G ++ + ++ ++++++ S N S ++ A +
Sbjct: 300 VTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCR---SGNVKRALVL 356
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAV 308
M+ GL PSA TY L+ G K G M++ + L+ + + G +D +I +
Sbjct: 357 FDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNE-----MQGKGIDLNPVIFNTLI 411
Query: 309 SGHGE--YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G+ E +DE + +M + GLE Y + G K D +
Sbjct: 412 DGYCESGMVDEALRL------------QVVMEKKGLESDVFAYNSIASGLCKLNRKDEAK 459
Query: 367 RLL 369
LL
Sbjct: 460 GLL 462
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 115/252 (45%), Gaps = 42/252 (16%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L+ + D+ A+ +L +++ GL PS ++ L+ GY + GD+D
Sbjct: 130 YPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGF 189
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A + M G+ P+ T+T L+
Sbjct: 190 RLKSAMHASGVQPDVYT-YSVLINGL--CKESKMDDANELFDEMLDKGMVPNGVTFTTLI 246
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 247 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDE------- 299
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI----RRLLAQNGSSLVNGD 380
MS GL+P TYT L+ G K GDM++ +R++ +N + D
Sbjct: 300 ------------MSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQEN----IRLD 343
Query: 381 YLDIIHALAVSG 392
D+++ +SG
Sbjct: 344 --DVVYTALISG 353
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 203 DVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTF------TTLIDGHCKNGRVD 256
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + ++ A ++ MS GL+P TYT L+
Sbjct: 257 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLI 316
Query: 202 CGYAKHGDMDS 212
G K GDM++
Sbjct: 317 DGCCKEGDMET 327
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 97/239 (40%), Gaps = 9/239 (3%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L++ + L + G+ P+ V++ LI+ Y
Sbjct: 127 ECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLING------YI 180
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M ++ LI G + + M A + M G+ P+
Sbjct: 181 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGV 240
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + ++ A ++ M
Sbjct: 241 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEM 300
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGH 311
S GL+P TYT L+ G K GDM++ ++ + Q L + Y +I L G
Sbjct: 301 SMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGR 359
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ D + ++ +G++P+++TY LI C++G++E
Sbjct: 273 DLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGC------CKEGDME 326
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
A + + M + + + V+ ALI G Q AE +L M GL+P+
Sbjct: 327 TAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNT 379
>gi|255660910|gb|ACU25624.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 484
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I Y+AL +V L + K+ S+GIEP R T+ LI +
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRXTFXVLIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKXEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAIXYSTLLPGLCN-----AEKMSEARS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ K G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLITSQCKSGNLDAASDVL 314
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQG---IVQESVKLFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + + L IL A+ M G+EP+ T+ L+ G+ G +++ R
Sbjct: 114 TIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRXTFXVLIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKXEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 39.7 bits (91), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 80/435 (18%), Positives = 168/435 (38%), Gaps = 56/435 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G ++ + K+ + M + + ++AL + A+ M G
Sbjct: 86 MIDSYGKQGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ L+ G+ G +++ +K + S + ++ + + +
Sbjct: 146 IEPTRXTFXVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKXE--E 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAIXYSTLLP 263
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
+ E + E +I+ MM + + +L+ K G++D+
Sbjct: 264 GLCNAEKMSEARSIL-----------KEMMDKYLAPTDNSIFMRLITSQCKSGNLDAASD 312
Query: 365 IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH 417
+ + + + G Y +I +G + +D++I K ++P + + +
Sbjct: 313 VLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAY 372
Query: 418 ---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVG-GFLVRHMVKTNQPGVGYSADAA 473
I +L N GQ A +V L + G Q P L+R G+S +
Sbjct: 373 NPMIEYLCNNGQAAKAETLVRQLLKW----GVQDPTALNTLIR----------GHSQE-- 416
Query: 474 NHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRL 533
G D+A+ ++ + R ++ E+ LV+ +K N+P D A+ +
Sbjct: 417 ---------GSPDSAFELLKIMLRR-KVDSEKSAYDS-LVQSYLKKNEPADAKAALDSMI 465
Query: 534 TDENLHPRAFNLAVL 548
+++L A +V+
Sbjct: 466 ENDHLPDSALFRSVM 480
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 106/273 (38%), Gaps = 69/273 (25%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
++ GI PN Y + LIS+YC G ++ A K+ MR+K +N LI G
Sbjct: 254 MKRSGIVPNAYAY------NCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
+ A ++ +++ GL P+ TY L+ G+ G MD
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMD----------------- 350
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK----HGDMDSVR 284
+A + + +GL P+ TY L+ GY+K G +D V+
Sbjct: 351 ------------------TAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVK 392
Query: 285 ----RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
R +A S + Y +I A A + E E+ + +M ++
Sbjct: 393 EMEERCIAPSKVT-----YTILIDAFARLNYTEKACEMHS---------------LMEKS 432
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
GL P TY+ L+ G HG+M +L G
Sbjct: 433 GLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLG 465
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 41/208 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN L+ + D + +L+S G+ P VTY LI+ Y + N+
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAG------YSKVENLA 385
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA +++ M ++ S+ + LI ++ N A + ++M ++GL P TY+ L+
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLI 445
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G HG+M K S+LF + + L+
Sbjct: 446 HGLCVHGNM----------KEASKLF-------------------------KSLGEMHLQ 470
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P++ Y ++ GY K G RLL +
Sbjct: 471 PNSVIYNTMIHGYCKEGSSYRALRLLNE 498
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 6/182 (3%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ Y E+ D + ++E + I P++VTY + LI + + E A +
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTY------TILIDAFARLNYTEKACE 424
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M ++ LI+G +M A + + + L+P++ Y ++ GY
Sbjct: 425 MHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYC 484
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G + + + SF T L+ AE +L M +GL+PS
Sbjct: 485 KEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVS 544
Query: 266 TY 267
Y
Sbjct: 545 LY 546
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 94/249 (37%), Gaps = 53/249 (21%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I C+ G ++L + + + ++ LI G + ++ A+ + M + G
Sbjct: 164 MIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLG 223
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
L P+ TY+ LM G+ K G Q E FQ+
Sbjct: 224 LVPNPHTYSVLMNGFFKQG-------------LQRE-----GFQMYE------------- 252
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHAL 306
M ++G+ P+A Y L+ Y G +D ++ A + G + Y +I L
Sbjct: 253 ----NMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGL 308
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G+ E +V VN + GL P+ TY L+ G+ G MD+
Sbjct: 309 C---RGKKFGEAVKLVHKVN------------KVGLSPNIVTYNILINGFCDVGKMDTAV 353
Query: 367 RLLAQNGSS 375
RL Q SS
Sbjct: 354 RLFNQLKSS 362
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 132/340 (38%), Gaps = 29/340 (8%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQG--IEPNRVTYQQLISNSKL 130
T EL D+ Y+ LL+ D + D L + G P+ V Y +I
Sbjct: 172 RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG--- 228
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
+ ++G++ A + + M + P ++++++ +A M AE L M G+
Sbjct: 229 ---FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 285
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
P+ TY L+ GY+ G ++ QS L +F + + + A
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARD 345
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
+ M+ G P +Y ++ GYA G DM + L+ G + V + +I A A
Sbjct: 346 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYA 405
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
G +D+ A++ F M G++P+ TYT ++ + G MD
Sbjct: 406 NCG---MLDK--AMIIFNE----------MRDHGVKPNVLTYTTVIAALCRIGKMDDAME 450
Query: 368 LLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI 404
Q V D Y +I G E+IS+I
Sbjct: 451 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEI 490
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 138/330 (41%), Gaps = 41/330 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+ L++ + + + ++++ + G+ + V + +I+N C+ G + A
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINN------LCKLGRVMDAQN 520
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I + + + V++ L+ G+ M A + M AG+EP+ Y L+ GY
Sbjct: 521 IFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC 580
Query: 206 KHGDMD---SIKTKI--PSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQ 257
K G +D S+ ++ +KP + L+ N++I + A+ M++
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILY--------NIIIDGLFEAGRTVPAKVKFHEMTE 632
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
+G+ + TY+ ++ G K+ D L + + V D + + +A ++E
Sbjct: 633 SGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEE 692
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA--QNG-- 373
+ F +I S++GL P TY+ ++ K G ++ + + QN
Sbjct: 693 AKDL--FASI----------SRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 740
Query: 374 ---SSLVNGDYLDIIHALAVSGHGEYIDEI 400
S L+N +++ + G Y+ +I
Sbjct: 741 EPDSRLLNHVVRELLKKNEIVRAGAYLSKI 770
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 135/335 (40%), Gaps = 30/335 (8%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
+++ ++ +N ++ V FL +E GI+P VTY L+ L
Sbjct: 219 MEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSL------ 272
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G IEGA I+ M+ K F +N ++ S + A +L M + GL P + +
Sbjct: 273 RGRIEGARLIISEMKSKGFQPDMQTYNPIL---SWMCNEGRASEVLREMKEIGLVPDSVS 329
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y L+ G + +GD++ + Q + +++ + + + + +AE ++ +
Sbjct: 330 YNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 389
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGE 313
+ G+ + TY L+ GY +HGD L + G Y +I+ L
Sbjct: 390 EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR 449
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
DE+ F + G G++P LM G+ G+MD LL +
Sbjct: 450 EADEL----------FEKVVG-----KGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD 494
Query: 374 SSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQ 405
+N D Y ++ L G E E++ +++
Sbjct: 495 MMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMK 529
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 134/320 (41%), Gaps = 34/320 (10%)
Query: 79 VPLDISHYNALLRVYLDN---EHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
VP +S YN L+R +N E F+ D + K QG+ P TY LI + +K
Sbjct: 324 VPDSVS-YNILIRGCSNNGDLEMAFAYRDEMVK---QGMVPTFYTYNTLIHGLFMENK-- 377
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
IE A ++ +R+K + +N LI G+ Q D A + M G++P+
Sbjct: 378 ----IEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 196 TYTKL---MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
TYT L +C K + D + K+ + +L + + + I +M A +L
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAI---GNMDRAFSLL 490
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
M + P TY LM G G + R L+ + + D+ I + +SG+
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH--ISYNTLISGYS 548
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
+ D A + + M+S G P+ TY L+ G +K+ + + LL +
Sbjct: 549 KKGDTKHAFM---------VRDEMLS-LGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
Query: 373 GSSLV---NGDYLDIIHALA 389
S + + + +I A++
Sbjct: 599 KSEGIVPNDSSFCSVIEAMS 618
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 46/252 (18%), Positives = 101/252 (40%), Gaps = 26/252 (10%)
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
+F+ L+ Q + A +M + G P +T ++ ++ +++ +
Sbjct: 157 LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADM 216
Query: 221 KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
++F + ++ + A+G L +M G++P+ TY L+ G++ G +
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 281 DSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHG-EYIDEVSAIVCFVNICFHWLEGPM 336
+ R ++++ S D Y I+ + G E + E
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLRE------------------- 317
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
M + GL P + +Y L+ G + +GD++ + R + + G Y +IH L +
Sbjct: 318 MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENK 377
Query: 394 GEYIDEIISKIQ 405
E + +I +I+
Sbjct: 378 IEAAEILIREIR 389
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 134/330 (40%), Gaps = 37/330 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN L+ ++ L ++ G+ P+RVTY L+ +C++G +
Sbjct: 381 NIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG------FCKEGQLN 434
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A I M F ALI G + + A GIL M + G+ T+T L+
Sbjct: 435 MAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALI 494
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K G + ++ L +F + + A +L M + GL
Sbjct: 495 DGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLV 554
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
PS T+T L+ G+ + G+ ++L Q+G S Y II+ L +G ++E
Sbjct: 555 PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR---VEEA 611
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNG-- 373
I+ MS G+ P+ TY L+ + K G +D I + +NG
Sbjct: 612 ETIL------------FSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 659
Query: 374 ------SSLVNGDYLD--IIHALAVSGHGE 395
S+L++G L I A A+S G+
Sbjct: 660 PNSHIYSALLSGFVLSNTAIGARALSSTGD 689
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 147/373 (39%), Gaps = 76/373 (20%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I +NAL+ Y S L+ +E +PN TY +L+ +SK +
Sbjct: 347 IITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK------ 400
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A +L + D +N L+ G + + A I M+ AGLEP T+T L+
Sbjct: 401 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 460
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
G K G ++ A GIL M + G+
Sbjct: 461 GLCKLGRLE-----------------------------------QANGILGSMVKKGISL 485
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHA----LAVSGHGEYIDEV 318
T+T L+ G+ K G V L ++V L H L G ++E
Sbjct: 486 DEVTFTALIDGHCKIGKAKDVCFLF----ENMVENRCLTTAHTFNCFLDALGKDYKLNEA 541
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD-SIRRL--LAQNGSS 375
+A++ G MM + GL PS T+T L+ G+ + G+ S++ L + Q G S
Sbjct: 542 NAML-----------GKMM-KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCS 589
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKIQP-GVGYSADAANHIYHL------INKGQID 428
Y II+ L +G E + I+ + GV + NH + + G++D
Sbjct: 590 PNVYTYTIIINGLCNNGRVEEAETILFSMSSFGV-----SPNHFTYAVLVKAHVKAGRLD 644
Query: 429 AAYRIVNTLARSA 441
A++IV+T+ ++
Sbjct: 645 RAFQIVSTMVKNG 657
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 119/294 (40%), Gaps = 34/294 (11%)
Query: 128 SKLISKYCQDGNIEGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMS 186
+ L+ C+ ++ A ++ E M +++ + ++ LI+G +A + A + M
Sbjct: 210 TSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV 269
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
+ G +PS +TYT L+ G D + + ++ + ++ + + +
Sbjct: 270 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIE 329
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-----------------Q 289
A G+ M + GL P T+ L+ GY K G + S +LL+
Sbjct: 330 EANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELM 389
Query: 290 SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM---------MSQA 340
G V+ Y + V +G D V+ + C EG + M+ A
Sbjct: 390 EGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC---KEGQLNMAFNIFNSMNSA 446
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALA-VSGH 393
GLEP T+T L+ G K G ++ +L GS + G LD + A + GH
Sbjct: 447 GLEPDGFTFTALIDGLCKLGRLEQANGIL---GSMVKKGISLDEVTFTALIDGH 497
>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
Length = 951
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 117/290 (40%), Gaps = 57/290 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI+ YN L+ V + + T L ++ ++GI P+ +T+ LI +C+ +++
Sbjct: 711 DITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILG------HCKSSHLD 764
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A I M + + FN L+ G A + A+ +L+ M + GLEP+ TY L+
Sbjct: 765 NAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILV 824
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYAK + K+ +L+ E M G
Sbjct: 825 TGYAKKSN------KVEALRLYCE-----------------------------MVSKGFI 849
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV--NGDYLDIIHALAVSGHGEYIDEVS 319
P A TY LM +AK G M+ + L ++ V DI+ ++G + + +
Sbjct: 850 PKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDIL----LNGWSKLRNGIE 905
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ + M + G +PS T + + +++ G RRLL
Sbjct: 906 VRILLKD----------MKELGFKPSKGTISSMSRAFSRPGMTGEARRLL 945
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 142/366 (38%), Gaps = 59/366 (16%)
Query: 44 LLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPT 103
LL ++N + GN+P E ++ D YN +
Sbjct: 533 LLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAK 592
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
FL ++ + G+EP++ TY +I+ C++G A K+L+ M+ + + +
Sbjct: 593 SFLKEMRNTGLEPDQATYNTMIA------ARCREGKTSKALKLLKEMKRNSIKPNLITYT 646
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK-------------------LMCGY 204
L+ G +A + A+ +L M+ AG P++ T+ + LM G
Sbjct: 647 TLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGA 706
Query: 205 AKHGDMDSIKTKIPSLKPQS---ELFLCFSFQLT----------NLLIL---VSSDMASA 248
H D+ T + L + LT N LIL SS + +A
Sbjct: 707 GLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNA 766
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGY---AKHGDMDSVRRLLAQSGSSLVNGDYLDIIHA 305
I M GL P+ T+ L+ G + G+ D+V + + G N Y DI+
Sbjct: 767 FAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTY-DIL-- 823
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
V+G+ + ++V A+ + M G P A TY LM +AK G M+
Sbjct: 824 --VTGYAKKSNKVEALRLYCE----------MVSKGFIPKASTYNSLMSDFAKAGMMNQA 871
Query: 366 RRLLAQ 371
+ L ++
Sbjct: 872 KELFSE 877
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 123/299 (41%), Gaps = 30/299 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V +D+ Y AL+ D L +S I PN VTY + L+ +C+ G
Sbjct: 358 VVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTY------TVLVDAHCRAG 411
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
NI+GA ++L M +K+ + F+++I G + + A + M +G+ P+ TY
Sbjct: 412 NIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYG 471
Query: 199 KLMCGYAK-HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMM 255
L+ G+ K G ++ L E +F + +L+ + + ++ AE + M
Sbjct: 472 TLIDGFFKFQGQEAALDVYRDMLHEGVE---ANNFVVDSLVNGLRKNGNIEGAEALFKDM 528
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHG 312
+ GL YT LM G K G+M + ++ + ++ D Y I+ L G
Sbjct: 529 DERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLG-- 586
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ S F+ M GLEP TY ++ + G +LL +
Sbjct: 587 ----KFSEAKSFLK---------EMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKE 632
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 102/256 (39%), Gaps = 40/256 (15%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI YC+ ++ A ++E M + + +N+L+ G + D +A ++ M G
Sbjct: 193 LIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADG 252
Query: 190 LEPSAQTYTKLMCGYAKHGDMDS--------IKTKI-PSLKPQSELF--LCFSFQLTNLL 238
+EP+ TYT L+ Y K MD +++ + P + S L LC Q +
Sbjct: 253 VEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSE-- 310
Query: 239 ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD 298
A + M + G+ P+ TY L+ AK LL G + G
Sbjct: 311 ---------AYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLL---GEMVSRGV 358
Query: 299 YLDIIHALAVS---GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCG 355
+D++ A+ G I+E ++ + P+ TYT L+
Sbjct: 359 VMDLVMYTALMDRLGKEGKIEEAKDVLRHAQ------------SDNITPNFVTYTVLVDA 406
Query: 356 YAKHGDMDSIRRLLAQ 371
+ + G++D ++L Q
Sbjct: 407 HCRAGNIDGAEQVLLQ 422
Score = 43.5 bits (101), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 86/231 (37%), Gaps = 44/231 (19%)
Query: 53 WCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ 112
+CS SL P L S + V D YN L + H L+++ +
Sbjct: 86 YCSLRSLRPA-LSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKR 144
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFM-RDKTFPISEGV-FNALIYGHS 170
G+ + VT S + C+ G + A + E + R + + V +NALI G+
Sbjct: 145 GVSWDGVTV------STALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALIDGYC 198
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+ DMA+A ++ M+ G+ Y L+ G+ GD D
Sbjct: 199 KVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDAD------------------- 239
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
+A ++ M G+EP+ TYT L+ Y K MD
Sbjct: 240 ----------------AALEVVERMKADGVEPNVVTYTALIGEYCKGKGMD 274
>gi|357124917|ref|XP_003564143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Brachypodium distachyon]
Length = 1285
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 132/298 (44%), Gaps = 42/298 (14%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA--SAEGILTMMSQ 187
++ Y + G + ++L+ MR + FN LI +++ +A SA +L + Q
Sbjct: 69 MMGVYARSGRFDDVRQLLDAMRGQELEPDLVSFNTLINARAKSGCLAPGSAFDLLLEVRQ 128
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILV--- 241
GL P TY L+ ++ ++D ++ ++ + + + +L+ N ++ V
Sbjct: 129 VGLRPDVITYNTLISACSQGSNLDDAVAVFEEMMASECRPDLWT------YNAMVSVHGR 182
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGD 298
AE + + + G +P A TY L+ +AK GD D+V R+ L ++G
Sbjct: 183 CGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEELVRAGFKKDGIT 242
Query: 299 YLDIIHALAVSGH-----GEYIDEVSAIVCFVNICFHWLE----GPM------------M 337
Y +IH G G Y DE+ A+ C + + + G M M
Sbjct: 243 YNTMIHMYGKMGRLDLALGLY-DEMRALGCTPDAVTYTVLIDSLGKMDRISDAGKVLEEM 301
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSG 392
+ AGL+P+ T++ L+C YAK G + R + +S V D YL ++ +A SG
Sbjct: 302 ADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVMLDIIARSG 359
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 98/248 (39%), Gaps = 44/248 (17%)
Query: 101 SPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEG 160
S D L ++ G+ P+ +TY LIS Q N++ A + E M
Sbjct: 118 SAFDLLLEVRQVGLRPDVITYNTLISACS------QGSNLDDAVAVFEEMMASECRPDLW 171
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK------ 214
+NA++ H + AE + + + G +P A TY L+ +AK GD D+++
Sbjct: 172 TYNAMVSVHGRCGKAQDAERMFRELVEKGFKPDAVTYNSLLYAFAKEGDADTVERVCEEL 231
Query: 215 -------------TKIPSLKPQSELFLCFSF-----------QLTNLLILVSS-----DM 245
T I L L +L+ S +
Sbjct: 232 VRAGFKKDGITYNTMIHMYGKMGRLDLALGLYDEMRALGCTPDAVTYTVLIDSLGKMDRI 291
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDI 302
+ A +L M+ AGL+P+ T++ L+C YAK G + R + +S V D YL +
Sbjct: 292 SDAGKVLEEMADAGLKPTLVTFSALICAYAKGGRREEAVRTFSHMVASGVKPDRLAYLVM 351
Query: 303 IHALAVSG 310
+ +A SG
Sbjct: 352 LDIIARSG 359
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 33/258 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ +Y N L ++ +G+ P +Y+ L++ S + E A +
Sbjct: 802 YNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLW------EQAEQ 855
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E +R K + ++ +++ L+ + A + + AE +L M + G+EP+ T LM Y
Sbjct: 856 LFEEIRSKGYRLNRSLYHMLMKIYRDACNHSKAEQLLASMKEDGIEPTIATMHILMTSYG 915
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
G D + + SLK S + L + D L M G++P Q
Sbjct: 916 TAGHPDEAEKVLNSLKSSSLEVSTLPYSTVFNAYLKNGDYNLGITKLLEMKADGVKPDHQ 975
Query: 266 TYTK---------------LMCGYAKHGDMDSVRRLLAQSGSSLVN--GDYLDIIHALAV 308
+T L+ + + D RLL + SSL+ ++L+ + AL
Sbjct: 976 VWTCFIRAASLCERTADAILLLNSLRDCEFDLPIRLLTERTSSLLTEVSNFLEELDAL-- 1033
Query: 309 SGHGEYIDEVSAIVCFVN 326
E SA + FVN
Sbjct: 1034 --------EDSAALNFVN 1043
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 153/387 (39%), Gaps = 61/387 (15%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN----------SKLI 131
D + Y L+ + E + + ++ GIEP+R Y+ +IS +L+
Sbjct: 518 DCNLYEYLITCLEEAEFFPEASQVFSDMQFIGIEPSRKIYESMISAYCKLGFPETAHQLM 577
Query: 132 SKYCQDG-----------NIEGATKILEFMRDKTF--------PISEGVFNALIYGHSQA 172
+ Q G IE KI + + F I ++NALI+ ++++
Sbjct: 578 DEAVQSGISLNILSSRVTMIEAYGKIKLWQHAENFVKGLKQEPSIDRRIWNALIHAYAES 637
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
A + +M + G P+ + +M G +D + + L+ + F
Sbjct: 638 GLYEHARAVFDIMIEKGPLPTIDSVNGMMRALIIDGRLDELYVIVQELQD-----MGFKI 692
Query: 233 QLTNLLILVSS-----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ +++++ + D+ I M +AG P+ Y ++ ++ V ++
Sbjct: 693 SKSTVILMLDAFTKAGDIFEVMKIYNGMKEAGYLPNMHIYRSMISLLCRNKRYRDVELMV 752
Query: 288 AQSGSSLVNGDYLDIIHALAV--SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ + D L I++ L + +G+G + V +H + +AGLEP+
Sbjct: 753 VEMERAGFEPD-LTILNTLLLMYTGNGNFDKTVEV--------YH-----SILEAGLEPN 798
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHG---EYIDEIIS 402
TY L+ Y+++ + LL + G + LA SG E +++
Sbjct: 799 EDTYNTLIVMYSRNLRPEEGFTLLNEMGKKGLTPKLESYKSLLAASGKAKLWEQAEQLFE 858
Query: 403 KIQPGVGYSADAANHIYHLINKGQIDA 429
+I+ GY + + +YH++ K DA
Sbjct: 859 EIRSK-GYRLNRS--LYHMLMKIYRDA 882
>gi|299469706|emb|CBN76560.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 915
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 131/332 (39%), Gaps = 33/332 (9%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI-EGATKILEFMRDKTFPISEGV-- 161
LA + G+ PN V + C G+ + A K+L M +K + +
Sbjct: 384 LLADMREDGVPPNDVVLNAAVD-------ACGKGDAPDEALKLLRGM-EKAYGVKPNTVT 435
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
FN+ I G S+A A+ +L MS+ GL+P ++ M G+A GD + + +K
Sbjct: 436 FNSAISGLSRAGRAREAKALLNEMSERGLKPDNFSFNAAMQGFAAAGDPRNTASLSDEMK 495
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
+ S+ + D+ A +L M +AG+EP+ Y + + G
Sbjct: 496 SRGIGMDVVSYGTAVSACAKAGDVKGALKLLKEMQEAGVEPNTVVYNSALDACGRAGKPK 555
Query: 282 SVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
+LL + G + V D Y I A + +G G+ WLE MS
Sbjct: 556 VAEKLLRKMGETGVVRDATSYTGAIVACSRNGDGDK-------------ALEWLE--TMS 600
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYID 398
+ G+ P A TY M + G+ LL + V + + A+ G +
Sbjct: 601 KEGIAPEAITYNYAMAACGRSGNDRQAEWLLNEMRGQGVTPNRISYSAAMFALGKAGRLP 660
Query: 399 EIISKIQPGVGYSADAANHIYHLINKGQIDAA 430
+++S ++ +A YH+ +DAA
Sbjct: 661 DVLSLLEEMHREGVEADEVTYHIA----VDAA 688
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 94/207 (45%), Gaps = 12/207 (5%)
Query: 86 YNALLRVYL---DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+NA ++ + D +T S +D +++S+GI + V+Y +S + G+++G
Sbjct: 471 FNAAMQGFAAAGDPRNTASLSD---EMKSRGIGMDVVSY------GTAVSACAKAGDVKG 521
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A K+L+ M++ + V+N+ + +A AE +L M + G+ A +YT +
Sbjct: 522 ALKLLKEMQEAGVEPNTVVYNSALDACGRAGKPKVAEKLLRKMGETGVVRDATSYTGAIV 581
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
+++GD D + ++ + ++ S + AE +L M G+ P
Sbjct: 582 ACSRNGDGDKALEWLETMSKEGIAPEAITYNYAMAACGRSGNDRQAEWLLNEMRGQGVTP 641
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ +Y+ M K G + V LL +
Sbjct: 642 NRISYSAAMFALGKAGRLPDVLSLLEE 668
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 98/472 (20%), Positives = 178/472 (37%), Gaps = 123/472 (26%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y AL+ YL + + + S+G PN VTY S LI +C+ G +E
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY------SALIDGHCKAGQME 605
Query: 142 GATKILEFM-----------------RDKTFPISEGVFNALIYGHSQANDMASAEGILTM 184
A +I E M D + + ++ AL+ G + + + A +L
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDA 665
Query: 185 MSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILV 241
MS G EP+ Y L+ G K G +D +K ++ + L+ +S + +
Sbjct: 666 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYT-YSSLIDRYFKVK 724
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD 301
D+AS +L+ M + P+ YT+++ G K G D +L+
Sbjct: 725 RQDLASK--VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ------------- 769
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
MM + G +P+ TYT ++ G+ + G
Sbjct: 770 ----------------------------------MMEEKGCQPNVVTYTAMIDGFGRIGK 795
Query: 362 MDSIRRLLAQNGSSLVNGDY---------------LDIIHALA-----------VSGHGE 395
+++ LL + GS V +Y LD+ H L +G+ +
Sbjct: 796 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRK 855
Query: 396 YIDEIISKIQPGVGYSADAANHIYHLINKGQIDAA-----YR-IVNTLARSANINGEQLP 449
I+ G++ + + L GQ D A YR +V+ L I ++L
Sbjct: 856 VIE----------GFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNL-----IKAQRLE 900
Query: 450 VGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANI 501
+ L+ + + V YS+ + I L ++D A+R+ + +++ I
Sbjct: 901 MALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVI 952
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 98/237 (41%), Gaps = 22/237 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNAL+ + + ++ P + L ++ + ++ + + ++ L+ KYC+ G+ A +
Sbjct: 168 YNALVDLIVRDDDEKVPEELLQQIR----DDDKEVFGEFLN--VLVRKYCRSGSFSIALE 221
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT---YTKLMC 202
L ++D F S +N LI +A+ + SA + MS A L T Y +C
Sbjct: 222 ELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLC 281
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGL 260
K + ++ ++E F+ + T L+ + +S A L M
Sbjct: 282 KVGKWREALTLM--------ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSC 333
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEY 314
P+ TY+ L+CG + +R+L G + ++HA SG Y
Sbjct: 334 LPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSY 390
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 116/295 (39%), Gaps = 28/295 (9%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P + Y++L+ Y + + L+K+ PN V Y ++I C+ G
Sbjct: 707 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDG------LCKVGK 760
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A K+++ M +K + + A+I G + + + +L M G+ P+ TY
Sbjct: 761 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRV 820
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L+ K+G +D + +K + + ++ + + + G+L + Q
Sbjct: 821 LIDHCCKNGALDVAHNLLEEMKQTH--WPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDD 878
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVN--GDYLDIIHALAVSGHGEY 314
P Y L+ K ++ RLL A ++LV+ Y +I +L ++
Sbjct: 879 TAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK--- 935
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
V+ F MS+ G+ P QT+ L+ G ++ + LL
Sbjct: 936 ----------VDKAFRLFSE--MSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978
>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 444
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 40/268 (14%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L ++++ GI PN VT+ LI +C D N+ A K+ M + + +N+L
Sbjct: 203 LKEMKADGICPNEVTFNILIDG------FCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSL 256
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I G + A + M + LEP+ T+ L+ G+ K+ +K E
Sbjct: 257 INGLCNNGKVNEATTLRDQMVNSCLEPNIITHNALLNGFCKN----------KMVKQAGE 306
Query: 226 LFLCFSFQ-----LTNLLILVSS-----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
LF Q +T IL+ + +M A + +M G+ P TY L+ G
Sbjct: 307 LFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVYPDVSTYNCLIVGLC 366
Query: 276 KHGDMDSVRRLLAQSGSSLVNGDYLDI-IHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
+ GD++ R +++ + + D + I ++ GE + +
Sbjct: 367 RKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKGEMKKTLRLL------------- 413
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
M + GL+PS TY ++ GY+K G++
Sbjct: 414 DEMCKKGLKPSQLTYNTMIDGYSKEGNL 441
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 98/224 (43%), Gaps = 29/224 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI-------------------- 125
+N L+ + ++++ A++ QG++PN VTY LI
Sbjct: 218 FNILIDGFCNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMV 277
Query: 126 ---------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
+++ L++ +C++ ++ A ++ E M + + +N LI + + +M
Sbjct: 278 NSCLEPNIITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENME 337
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236
A + +M G+ P TY L+ G + GD++ + ++ + + ++ +
Sbjct: 338 DAFALYRIMLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILM 397
Query: 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
+ +M +L M + GL+PS TY ++ GY+K G++
Sbjct: 398 DSLCNKGEMKKTLRLLDEMCKKGLKPSQLTYNTMIDGYSKEGNL 441
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 117/264 (44%), Gaps = 26/264 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN++LR + L ++ + IEP+ VT + LI+ YC+ G++ A K
Sbjct: 347 YNSILRKLCEGGRLRDANILLNEMSERKIEPDNVT------CNTLINAYCKIGDMRSALK 400
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + + + ALI+G +A ++ A+ +L M AG PS TY+ L+ Y
Sbjct: 401 VKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYC 460
Query: 206 KHGDMDSIKTKIPSLKPQSELF---LCFSFQLTNLLI---LVSSDMASAEGILTMMSQAG 259
K + +++ K+P EL LC + LI + A+ +L +M G
Sbjct: 461 KQQNEEAV-IKLP-----DELVRRGLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKG 514
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
+ + YT L GY K G ++ +L + + L I + S + Y + S
Sbjct: 515 IFGDSVVYTSLAYGYWKVGKVNVTSDILDE-----MYKKRLMITLKIYRSFNASYASDNS 569
Query: 320 AIVCFVNICFHWLEGPMMSQAGLE 343
+ F N H LE +MS+ L+
Sbjct: 570 ILSLFWN---HVLERRLMSKNILK 590
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 124/298 (41%), Gaps = 30/298 (10%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+L V +I YN LL + L+++E + + P+ TY + LIS YC
Sbjct: 199 KLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTY------NTLISLYC 252
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G A + + M +N+LIYG + M E + + P+
Sbjct: 253 KKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRM--REAVQLFRDIKDVTPNHV 310
Query: 196 TYTKLMCGYAKHGDMD-SIKTK-IPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
TYT L+ GY + D+D +++ K + S K + ++ L L + A +L
Sbjct: 311 TYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKL--CEGGRLRDANILLN 368
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSG 310
MS+ +EP T L+ Y K GDM S V+ + +G L Y +IH
Sbjct: 369 EMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFC--- 425
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
+ ID+ + L G M AG PS TY+ L+ Y K + +++ +L
Sbjct: 426 KAKEIDKAKEL----------LFG--MMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKL 471
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 124/317 (39%), Gaps = 55/317 (17%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI---------------- 125
D+ YN L+ +Y + ++E GI P+ TY LI
Sbjct: 240 DLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLF 299
Query: 126 -----------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAND 174
+ + LI YC+ +++ A ++ E M +K + +N+++ +
Sbjct: 300 RDIKDVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGR 359
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKI--PSLKPQSELFLC 229
+ A +L MS+ +EP T L+ Y K GDM S +K K+ LK
Sbjct: 360 LRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQ----- 414
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL--- 286
F+++ + ++ A+ +L M AG PS TY+ L+ Y K + ++V +L
Sbjct: 415 FTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDE 474
Query: 287 LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
L + G + Y +I ++ I C + +M G+ +
Sbjct: 475 LVRRGLCVDVSVYRALIRRFC---------KIEKIDCAQRVL------GLMKDKGIFGDS 519
Query: 347 QTYTKLMCGYAKHGDMD 363
YT L GY K G ++
Sbjct: 520 VVYTSLAYGYWKVGKVN 536
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 97/240 (40%), Gaps = 14/240 (5%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ C+ G++E A K+L M K +N LI + + A + M AG
Sbjct: 212 LLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAG 271
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+ P TY L+ G+ + G M +K + + ++ + + +D+ A
Sbjct: 272 ISPDIFTYNSLIYGFCREGRMREAVQLFRDIKDVTPNHVTYTSLIDGYCRV--NDLDEAL 329
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+ +MS+ GL P+ TY ++ + G + LL + + D ++ ++
Sbjct: 330 RLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPD--NVTCNTLIN 387
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ + D SA+ M AGL+ TY L+ G+ K ++D + LL
Sbjct: 388 AYCKIGDMRSALKV----------KDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELL 437
Score = 46.2 bits (108), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 118/310 (38%), Gaps = 35/310 (11%)
Query: 89 LLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILE 148
L+ VY +++ T + G P+ L + + L++ +D + KI +
Sbjct: 142 LVIVYGNSKMTHEAIQVFEHMRVNGFRPH------LHACTVLLNSLAKDRLTDTVWKIYK 195
Query: 149 FMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 208
M + V+N L++ ++ D+ AE +L+ M + P TY L+ Y K G
Sbjct: 196 KMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKG 255
Query: 209 ---DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ S++ ++ ++ F +L+ + E + + P+
Sbjct: 256 MHYEALSVQDRMEMAGISPDI-----FTYNSLIYGFCREGRMREAVQLFRDIKDVTPNHV 310
Query: 266 TYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TYT L+ GY + D+D RL +++ G Y I+ L G
Sbjct: 311 TYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRD-------- 362
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNG 379
NI + MS+ +EP T L+ Y K GDM S ++ + G L
Sbjct: 363 --ANILLN-----EMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQF 415
Query: 380 DYLDIIHALA 389
Y +IH
Sbjct: 416 TYKALIHGFC 425
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 132/305 (43%), Gaps = 39/305 (12%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PSA +Y LM GY + G +D
Sbjct: 113 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGF 172
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ +S + L S M A+ + M GL P+ T+T L+
Sbjct: 173 RLKSAMLASGVQPDVY-TYSVLINGL--CKESKMDDADELFDEMLVKGLVPNGVTFTTLI 229
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I+ L G + ID+
Sbjct: 230 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDD------- 282
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDY 381
MS+ GL+P TYT L+ G K G + S R+ L Q L + Y
Sbjct: 283 ------------MSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVY 330
Query: 382 LDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLA 438
+I L G ++++ ++ VG + D + I KG + +++ +
Sbjct: 331 TALISGLCQEGRSVDAEKMLREMLS-VGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 389
Query: 439 RSANI 443
R ++
Sbjct: 390 RDGHV 394
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 186 DVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTF------TTLIDGHCKNGRVD 239
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS+ GL+P TYT L+
Sbjct: 240 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLI 299
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELF--LCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K G + S L ++ + ++ ++ L S AE +L M G
Sbjct: 300 DGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRS--VDAEKMLREMLSVG 357
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L P TYT ++ + K GD+ +LL +
Sbjct: 358 LNPDTGTYTMIINEFCKKGDVWKGSKLLKE 387
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 109/280 (38%), Gaps = 53/280 (18%)
Query: 130 LISKYCQDGNIEGATKIL-----------------------------EFMRDKTFPISEG 160
L+ ++C+DG+I A + E R K+ ++ G
Sbjct: 123 LMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASG 182
Query: 161 V------FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
V ++ LI G + + M A+ + M GL P+ T+T L+ G+ K+G +D
Sbjct: 183 VQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAM 242
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+ QS L ++ + D+ A ++ MS+ GL+P TYT L+ G
Sbjct: 243 EIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGC 302
Query: 275 AKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
K G + S R+ L Q L + Y +I L G +D +
Sbjct: 303 CKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRS--VDAEKML---------- 350
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M GL P TYT ++ + K GD+ +LL +
Sbjct: 351 ---REMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKE 387
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 92/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I Y+AL +V + + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCN-----AEKMSEARS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M + P+ + + +L+ + K G++D+ +L
Sbjct: 277 ILKEMVDKYIAPTDNSIFMRLISSHCKVGNLDAAADVL 314
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 110/278 (39%), Gaps = 24/278 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEG---IVQESVKLFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + + L I+ A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D I + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--ITYNTMINGYCRVKKMEEAEKYFVE----------MKGKNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPG 407
TYT L+ GY +D RL+ + + + + L + E + E S ++
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEM 281
Query: 408 V-GYSADAANHIY-HLINK----GQIDAAYRIVNTLAR 439
V Y A N I+ LI+ G +DAA ++ + R
Sbjct: 282 VDKYIAPTDNSIFMRLISSHCKVGNLDAAADVLKAMIR 319
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 68/162 (41%), Gaps = 4/162 (2%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + ++AL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYCRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
AE M +EP+ TYT L+ GY +D RL+ +
Sbjct: 204 AEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEE 245
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ + PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ K + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +LL +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 128/305 (41%), Gaps = 43/305 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ L PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M L P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMDDANELFDEMLDNXLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+++ R+ + + L + Y
Sbjct: 302 ------------MSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAY 349
Query: 382 LDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
+I L G + + E++S ++P +G N KG + +++
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLLKE 406
Query: 437 LARSA 441
+ R
Sbjct: 407 MQRDG 411
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 119/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + + P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M L P+
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 108/268 (40%), Gaps = 22/268 (8%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L L G+ P V Y LI+ YCQ ++ GA I E M+ + +NAL
Sbjct: 179 LEMLVHTGLVPTTVIYNTLING------YCQVRDLRGAFCIFEQMKSRHIRPDHITYNAL 232
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I G + + AE ++ M ++G++PS +T+ L+ Y G ++ T + ++ +
Sbjct: 233 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 292
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
SF + + A IL M + P+AQ Y ++ Y + GD +
Sbjct: 293 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFL 352
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
L+ + +S V+ + + L + G IDE ++ + GL
Sbjct: 353 LVEKMKNSGVSASI--VTYNLLLKGLCRSSQIDEAEELI------------YTLRNQGLR 398
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
P +Y ++ GD D LL +
Sbjct: 399 PDVVSYNTIISACCNKGDTDKALELLQE 426
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 113/294 (38%), Gaps = 27/294 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNAL+ E D + ++E G++P+ T+ + LI Y G +E
Sbjct: 229 YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF------NTLIDAYGTAGQLEKCFT 282
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M+ K F +++ + + A IL M + P+AQ Y ++ Y
Sbjct: 283 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 342
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ GD + + +K ++ L + SS + AE ++ + GL P
Sbjct: 343 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 402
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN---GDYLDIIHALAVSGHGEYIDEVSAIV 322
+Y ++ GD D LL + + Y ++ ALA +G V +
Sbjct: 403 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGR------VHDME 456
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK---HGDMDSIRRLLAQNG 373
C H +EPS+ Y ++ Y + + S+++ +++ G
Sbjct: 457 CLYQQMLH---------KNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 501
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 98/515 (19%), Positives = 190/515 (36%), Gaps = 84/515 (16%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I+ + G A K+ + M D + +N +I GH + D+ + + M G
Sbjct: 22 VIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDG 81
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL------------TNL 237
+P+ TY L+ G + G MD + + + S F++ + T L
Sbjct: 82 PKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTML 141
Query: 238 LILVSS-----------------------DMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+ S +A AE +L M+ GL P+ Y L+ GY
Sbjct: 142 SLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGY 201
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
+ D+ + Q S + D+ I + ++G +C + + +
Sbjct: 202 CQVRDLRGAFCIFEQMKSRHIRPDH--ITYNALING-----------LCKLEMVTKAEDL 248
Query: 335 PM-MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL---DIIHALAV 390
M M ++G++PS +T+ L+ Y G ++ +L+ + D + ++ A
Sbjct: 249 VMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCK 308
Query: 391 SGH-GEYIDEIISKIQPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLAR---SANING 445
+G E + + I V +A N I I G + A+ +V + SA+I
Sbjct: 309 NGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVT 368
Query: 446 EQLPVGGFLVRHMVKTNQPGV------GYSADAANH---IYHLINKGQIDAAYRIVNTLA 496
L + G + + + G D ++ I NKG D A ++ +
Sbjct: 369 YNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 428
Query: 497 RSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTD-ENLHPRAFNLAVLIKAHVLK 555
+ + +R ++T + LA R+ D E L+ + + V + +
Sbjct: 429 K-------------YGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI-- 473
Query: 556 EDYTGAVETFEYCVNQFRATPWKGELLKRFIQAED 590
Y V+ + C N + K E+ ++ I +D
Sbjct: 474 --YGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 506
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
DV + YN+++ Y+++ T + K+++ G+ + VTY L+ C+
Sbjct: 326 DVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKG------LCRS 379
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
I+ A +++ +R++ +N +I D A +L M++ G+ P+ +TY
Sbjct: 380 SQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTY 439
Query: 198 TKLMCGYAKHG---DMDSIKTKI--PSLKPQSELF 227
L+ A G DM+ + ++ +++P S ++
Sbjct: 440 HTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 474
>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
Length = 814
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 6/197 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ ++ E T +F ++ S+ ++PN V Y LI YC+ G +
Sbjct: 598 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR------AYCRSGRLS 651
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ E M+ K + + +LI G S + + A+ + M GLEP+ YT L+
Sbjct: 652 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 711
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K G M ++ + + ++ ++ + ++ A +L M + G+
Sbjct: 712 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 771
Query: 262 PSAQTYTKLMCGYAKHG 278
P + TY + + GY K G
Sbjct: 772 PDSITYKEFIYGYLKQG 788
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 140/346 (40%), Gaps = 63/346 (18%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F K+ +G+EP +TY S L+ + I A +L+ M K FP + V+N
Sbjct: 306 FKEKMVERGMEPTLITY------SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 359
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
LI +A + A I +M GL ++ TY L+ GY K+G D+ + + +
Sbjct: 360 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM---- 415
Query: 225 ELFLCFSFQ---LTNLLILVSSDMA--SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
L + F+ T+++ L+ S + SA + M + P T L+ G KHG
Sbjct: 416 -LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 474
Query: 280 MDSVRRLLAQSGSSLVNGDYLD------IIHALA--------------VSGHGEYIDEVS 319
L Q L G +D ++H L + G G +D VS
Sbjct: 475 HSKALELWFQ---FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 531
Query: 320 AIVCFVNIC--------FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
C F +L+ M + GL+P TY+ L+CG +M+ + +
Sbjct: 532 YNTLISGCCGKKKLDEAFMFLDE--MVKRGLKPDNYTYSILICGLF---NMNKVEEAIQF 586
Query: 372 NGSSLVNGDYLDI-IHALAVSG---------HGEYIDEIISK-IQP 406
NG D+ +++ + G E+ DE++SK +QP
Sbjct: 587 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 632
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 115/293 (39%), Gaps = 44/293 (15%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
+D YN L+ + FL ++ +G++P+ TY LI C N+
Sbjct: 527 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI---------CGLFNM 577
Query: 141 EGATKILEFM----RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+ ++F R+ P ++ +I G +A + M ++P+
Sbjct: 578 NKVEEAIQFWDDCKRNGMLP-DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 636
Query: 197 YTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAE 249
Y L+ Y + G + K + P S + T+L+ + + S + A+
Sbjct: 637 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY-------TSLIKGMSIISRVEEAK 689
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+ M GLEP+ YT L+ GY K G M V LL + S V+ + I + + +
Sbjct: 690 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN--KITYTVMIG 747
Query: 310 GHGE--YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
G+ + E S ++ M + G+ P + TY + + GY K G
Sbjct: 748 GYARDGNVTEASRLL------------NEMREKGIVPDSITYKEFIYGYLKQG 788
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 129/326 (39%), Gaps = 41/326 (12%)
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
I+ +C+ G +E A K+ M + + FN +I G A M + G+
Sbjct: 256 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 315
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMAS 247
EP+ TY+ L+ G + I LK ++ + + N LI + + +
Sbjct: 316 EPTLITYSILVKGLTRA---KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 372
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
A I +M GL ++ TY L+ GY K+G D+ RLL + S N +
Sbjct: 373 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN--------- 423
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG------LEPSAQTYTKLMCGYAKHGD 361
G + ++++C +C H + + G + P T L+ G KHG
Sbjct: 424 ---QGSF----TSVICL--LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 474
Query: 362 MDSIRRLLAQ--NGSSLVNGDYLD-IIHALAVSGHGEYIDEI--ISKIQPGVGYSADAAN 416
L Q N +V+ + ++H L +G +DE I K G G D +
Sbjct: 475 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK---LDEAFRIQKEILGRGCVMDRVS 531
Query: 417 H---IYHLINKGQIDAAYRIVNTLAR 439
+ I K ++D A+ ++ + +
Sbjct: 532 YNTLISGCCGKKKLDEAFMFLDEMVK 557
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 154/400 (38%), Gaps = 81/400 (20%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L K+ G P+ +TY ++ C+ G + A +L M++K + FN L
Sbjct: 220 LGKMRDYGCPPDNITYNTILDG------LCKKGRLNEARDLLLDMKNKGLFPNRTTFNIL 273
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG----------DMDSIKT 215
+ G + + A ++ +MSQ + P A TY ++ G+ K G +M+++K
Sbjct: 274 VVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKL 333
Query: 216 KIPSLKPQSELFLCFS-------FQLT---------------NLLI---LVSSDMASAEG 250
+ + + CF F+L N+++ + M +
Sbjct: 334 SPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDK 393
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG---------------SSLV 295
+ M ++G P TY L+ + K G MD RL+ + G +L
Sbjct: 394 TVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALC 453
Query: 296 NGDYLDIIHALAVSG--HGEYIDEVSAIVCFVNICFH---------WLEGPMMSQAGLEP 344
LD H L S G ++DEVS + H W E M + + P
Sbjct: 454 RERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDE---MKEKEIIP 510
Query: 345 SAQTYTKLMCGYAKHGDMD-SIRRLLAQNGSSLVNGD--YLDIIHALAVSGHGE----YI 397
S TY ++ G + G + +I +L S LV + Y IIH G E +
Sbjct: 511 SIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFH 570
Query: 398 DEIISK-IQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
++++ K +P V + L +G ++ A ++ NT
Sbjct: 571 NKMVEKNFKPDV---VTCNTLLCGLCKEGMLEKALKLFNT 607
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 110/291 (37%), Gaps = 54/291 (18%)
Query: 157 ISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTK 216
I+ FN LI+G N A +L M G P TY ++ G K G ++ +
Sbjct: 195 INTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDL 254
Query: 217 IPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
+ +K + +F + + + A ++ +MSQ + P A TY ++ G+ K
Sbjct: 255 LLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCK 314
Query: 277 HGDMDSVRRLLAQ-----------SGSSLVNGDY--------LDIIHALAVSGHGEYIDE 317
G + RL + + ++L+NG + +I + G G +
Sbjct: 315 QGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEM--EGRGMKPNS 372
Query: 318 VSAIVCFVNICFHWL--EGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
V+ N+ W +G M M ++G P TY L+ + K G MD
Sbjct: 373 VT-----YNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAF 427
Query: 367 RLLAQNG---------------SSLVNGDYLDIIHALAVSG--HGEYIDEI 400
RL+ + G +L LD H L S G ++DE+
Sbjct: 428 RLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEV 478
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 75/384 (19%), Positives = 141/384 (36%), Gaps = 31/384 (8%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L + D+ YN L+ ++ + + ++E +G++PN VTY + ++ + +
Sbjct: 331 LKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTY------NVMVKWFVK 384
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G ++ K + M + +N LI H + M A ++ M + GL+ T
Sbjct: 385 KGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVT 444
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
++ + +D + S + + S+ + + A + M
Sbjct: 445 LNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMK 504
Query: 257 QAGLEPSAQTYTKLMCGYAKHGD----MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
+ + PS TY ++ G + G +D + LL +SG Y IIH G
Sbjct: 505 EKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELL-ESGLVPDEITYNTIIHGYCQEGQV 563
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL--- 369
E + FH M + +P T L+CG K G ++ +L
Sbjct: 564 EKAFQ-----------FH----NKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTW 608
Query: 370 AQNGSSLVNGDYLDIIHALAVSGH-GEYIDEIISKIQPGVGYSADAANHIY-HLINKGQI 427
G + Y II +L GE D + + +G N I L + G++
Sbjct: 609 ISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRM 668
Query: 428 DAAYRIVNTLARSANINGEQLPVG 451
A ++ +A + L +G
Sbjct: 669 KDAEEFISKIAEKGKSENQFLELG 692
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 107/279 (38%), Gaps = 34/279 (12%)
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
A I M + G++P+ T L+ + SI+ ++ + + N+
Sbjct: 143 AAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNI 202
Query: 238 LI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSL 294
LI + + A +L M G P TY ++ G K G ++ R LL
Sbjct: 203 LIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLL------- 255
Query: 295 VNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNIC-FHWLEGP-----MMSQAGLEPSAQT 348
L + G + + + + V C WL+ +MSQ + P A T
Sbjct: 256 -----------LDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWT 304
Query: 349 YTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQ 405
Y ++ G+ K G + RL + + ++ D Y +I+ G E ++I +++
Sbjct: 305 YNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEME 364
Query: 406 PGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSA 441
G G ++ + + + KG++D + V + S
Sbjct: 365 -GRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESG 402
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 134/330 (40%), Gaps = 37/330 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN L+ ++ L ++ G+ P+RVTY L+ +C++G +
Sbjct: 338 NIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDG------FCKEGQLN 391
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A I M F ALI G + + A GIL M + G+ T+T L+
Sbjct: 392 MAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALI 451
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K G + ++ L +F + + A +L M + GL
Sbjct: 452 DGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLV 511
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
PS T+T L+ G+ + G+ ++L Q+G S Y II+ L +G ++E
Sbjct: 512 PSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGR---VEEA 568
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNG-- 373
I+ MS G+ P+ TY L+ + K G +D I + +NG
Sbjct: 569 ETIL------------FSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQ 616
Query: 374 ------SSLVNGDYLD--IIHALAVSGHGE 395
S+L++G L I A A+S G+
Sbjct: 617 PNSHIYSALLSGFVLSNTAIGARALSSTGD 646
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 147/373 (39%), Gaps = 76/373 (20%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I +NAL+ Y S L+ +E +PN TY +L+ +SK +
Sbjct: 304 IITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK------ 357
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A +L + D +N L+ G + + A I M+ AGLEP T+T L+
Sbjct: 358 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 417
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
G K G ++ A GIL M + G+
Sbjct: 418 GLCKLGRLE-----------------------------------QANGILGSMVKKGISL 442
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHA----LAVSGHGEYIDEV 318
T+T L+ G+ K G V L ++V L H L G ++E
Sbjct: 443 DEVTFTALIDGHCKIGKAKDVCFLF----ENMVENRCLTTAHTFNCFLDALGKDYKLNEA 498
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD-SIRRL--LAQNGSS 375
+A++ G MM + GL PS T+T L+ G+ + G+ S++ L + Q G S
Sbjct: 499 NAML-----------GKMM-KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCS 546
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKIQP-GVGYSADAANHIYHL------INKGQID 428
Y II+ L +G E + I+ + GV + NH + + G++D
Sbjct: 547 PNVYTYTIIINGLCNNGRVEEAETILFSMSSFGV-----SPNHFTYAVLVKAHVKAGRLD 601
Query: 429 AAYRIVNTLARSA 441
A++IV+T+ ++
Sbjct: 602 RAFQIVSTMVKNG 614
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 120/294 (40%), Gaps = 34/294 (11%)
Query: 128 SKLISKYCQDGNIEGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMS 186
+ L+ C+ ++ A ++ E M ++++ + ++ LI+G +A + A + M
Sbjct: 167 TSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMV 226
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
+ G +PS +TYT L+ G D + + ++ + ++ + + +
Sbjct: 227 EKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIE 286
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-----------------Q 289
A G+ M + GL P T+ L+ GY K G + S +LL+
Sbjct: 287 EANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELM 346
Query: 290 SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM---------MSQA 340
G V+ Y + V +G D V+ + C EG + M+ A
Sbjct: 347 EGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC---KEGQLNMAFNIFNSMNSA 403
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALA-VSGH 393
GLEP T+T L+ G K G ++ +L GS + G LD + A + GH
Sbjct: 404 GLEPDGFTFTALIDGLCKLGRLEQANGIL---GSMVKKGISLDEVTFTALIDGH 454
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 125/330 (37%), Gaps = 36/330 (10%)
Query: 68 DPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
D FS G +P D+ Y++L+ +F ++E +GI + TY LI
Sbjct: 167 DMFSEMIGAGILP-DVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHG 225
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+ G + T L M D+ F F LI G + + A+ IL +M
Sbjct: 226 ------LSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHH 279
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSD 244
G EP TY LM G G ++ SL + FS+ N+LI
Sbjct: 280 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY---NILINGYCKDQK 336
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLD 301
+ A + M GL+PS TY L+ + G + + ++L + G L Y
Sbjct: 337 IDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 396
Query: 302 IIHALAVSGH-GEYIDEVSAI-------------VCFVNICFH------WLEGPMMSQAG 341
++ L +GH E ID +I + +C W + +S+ G
Sbjct: 397 LLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 456
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
LEP Y L+ G G + +LL Q
Sbjct: 457 LEPDTIAYNILINGLCNKGMLSEAVKLLWQ 486
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 120/330 (36%), Gaps = 62/330 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y ++ + T D +++ GI P+ V Y S L+ C+ G ++
Sbjct: 145 DVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVY------SSLMDGLCRFGRLK 198
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M + +N+LI+G S+A L +M G P A T+T L+
Sbjct: 199 EALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILI 258
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K G + A+ IL +M G E
Sbjct: 259 DGLCKEG-----------------------------------KVGEAQQILELMHHKGKE 283
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P TY LM G G ++ +L LA G L Y +I+ + IDE
Sbjct: 284 PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYC---KDQKIDEA 340
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGSS 375
F E M GL+PS TY L+ + G + + ++L + G
Sbjct: 341 ----------FRLFE--EMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQF 388
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
L Y ++ L +GH E ++ I+
Sbjct: 389 LKLSTYCVLLDGLCKNGHLEEAIDLFQSIK 418
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/223 (18%), Positives = 85/223 (38%), Gaps = 29/223 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI------------- 125
+ L++ YN L+ Y ++ ++ +G++P+ VTY LI
Sbjct: 317 IKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 376
Query: 126 ----------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
+ L+ C++G++E A + + ++ + VF+ L+ G
Sbjct: 377 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGM 436
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC 229
+A + A +S+ GLEP Y L+ G G + + ++ + L
Sbjct: 437 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDS 496
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
+F + +L +++ A +L M P + L+C
Sbjct: 497 ITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLC 539
Score = 40.0 bits (92), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 111/286 (38%), Gaps = 32/286 (11%)
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
L+ G N + A + M++ GL A+TY L+ G K + KT + +
Sbjct: 82 TLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCK-----ARKTGLAIKLHE 136
Query: 224 SELFLCFSFQLTNLLILVS--SDMASAEGI--LTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
C T +I+ S D + E + + M AG+ P Y+ LM G + G
Sbjct: 137 KMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGR 196
Query: 280 MDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM 336
+ + ++ D Y +IH L+ +G + + F+N +
Sbjct: 197 LKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWK------EVTWFLN---------L 241
Query: 337 MSQAGLEPSAQTYTKL---MCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
M G P A T+T L +C K G+ I L+ G Y +++ L + G
Sbjct: 242 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQ 301
Query: 394 GEYIDEIISKI-QPGVGYSADAANHIYHLINKGQ-IDAAYRIVNTL 437
E ++ + G+ + + N + + K Q ID A+R+ +
Sbjct: 302 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEM 347
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 124/319 (38%), Gaps = 77/319 (24%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L++ + L +++ +G PN VTY LI YC++GN+E
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDG------YCKEGNME 420
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ M +K + F+ LI G+ +A M +A G+ T M GL P YT L+
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K G+ +F+L M +AGL
Sbjct: 481 DGHFKDGNTKE------------------AFRLHK-----------------EMQEAGLH 505
Query: 262 PSAQTYTKLMCGYAKHGDM-DSVRRLLAQSGSSLVNGD---------------YLDIIHA 305
P+ T + L+ G K G + D+++ LA++G+ Y +I
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQG 565
Query: 306 LAVSGH----GEYIDEVSA-------IVCFVNICFHW----LEGPMMSQA-----GLEPS 345
L G ++ ++ C V I H+ L MM QA G+ P+
Sbjct: 566 LCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPN 625
Query: 346 AQTYTKLMCGYAKHGDMDS 364
+ Y L GY + G + S
Sbjct: 626 SSVYRVLAKGYEESGYLKS 644
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 133/343 (38%), Gaps = 81/343 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY----------QQLISNSK------ 129
YN ++ Y H + ++ G+ PN VT+ +++S K
Sbjct: 266 YNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMA 325
Query: 130 -------------LISKYCQDGNIEGATKI-LEFMRDKTFPISEGVFNALIYGHSQANDM 175
LI YC+ GN+ A + E + + P ++ LI G + M
Sbjct: 326 SFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILP-DVFTYSILIKGLCGVDRM 384
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT 235
A+G+L M + G P+A TY L+ GY K G+M+
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME------------------------ 420
Query: 236 NLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV 295
A + + M++ G+EP+ T++ L+ GY K G M++ L + ++
Sbjct: 421 -----------KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE---MVI 466
Query: 296 NGDYLDIIHALA-VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMC 354
G D++ A + GH + + A H M +AGL P+ T + L+
Sbjct: 467 KGLLPDVVAYTALIDGHFKDGNTKEAFR------LH----KEMQEAGLHPNVFTLSCLID 516
Query: 355 GYAKHGDM-DSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEY 396
G K G + D+I+ LA+ G+ ++ +L H Y
Sbjct: 517 GLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMY 559
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 135/335 (40%), Gaps = 37/335 (11%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL-EFMRDKTFPISEGVFNALIYGH 169
++G PN VTY LI C+ G+ A ++ E + K FP + ++ LI G
Sbjct: 186 ARGASPNVVTYGTLIDGC------CRQGDFLKAFRLFDEMIEKKIFP-TVVIYTILIRGL 238
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC 229
+ ++ AE + M +G+ P+ TY +M GY K + + L
Sbjct: 239 CGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNV 298
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+F + + + +M SA L M+ G+ P+ Y L+ GY K G++ L ++
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE 358
Query: 290 SGSSLVNGDYLDIIHALAVSGHG--EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
+ D +++ + G + ++E ++ M + G P+A
Sbjct: 359 IEKHEILPDVF--TYSILIKGLCGVDRMEEADGLL------------QEMKKKGFLPNAV 404
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGH-----GEYIDE 399
TY L+ GY K G+M+ + +Q + + + +I +G G Y +
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 400 IISKIQPG-VGYSADAANHIYHLINKGQIDAAYRI 433
+I + P V Y+A H G A+R+
Sbjct: 465 VIKGLLPDVVAYTALIDGH----FKDGNTKEAFRL 495
>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 89/197 (45%), Gaps = 6/197 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ ++ E T +F ++ S+ ++PN V Y LI YC+ G +
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR------AYCRSGRLS 662
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ E M+ K + + +LI G S + + A+ + M GLEP+ YT L+
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K G M ++ + + ++ ++ + ++ A +L M + G+
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 262 PSAQTYTKLMCGYAKHG 278
P + TY + + GY K G
Sbjct: 783 PDSITYKEFIYGYLKQG 799
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 140/346 (40%), Gaps = 63/346 (18%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F K+ +G+EP +TY S L+ + I A +L+ M K FP + V+N
Sbjct: 317 FKEKMVERGMEPTLITY------SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 370
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
LI +A + A I +M GL ++ TY L+ GY K+G D+ + + +
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM---- 426
Query: 225 ELFLCFSFQ---LTNLLILVSSDMA--SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
L + F+ T+++ L+ S + SA + M + P T L+ G KHG
Sbjct: 427 -LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485
Query: 280 MDSVRRLLAQSGSSLVNGDYLD------IIHALA--------------VSGHGEYIDEVS 319
L Q L G +D ++H L + G G +D VS
Sbjct: 486 HSKALELWFQ---FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 542
Query: 320 AIVCFVNIC--------FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
C F +L+ M + GL+P TY+ L+CG +M+ + +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDE--MVKRGLKPDNYTYSILICGLF---NMNKVEEAIQF 597
Query: 372 NGSSLVNGDYLDI-IHALAVSG---------HGEYIDEIISK-IQP 406
NG D+ +++ + G E+ DE++SK +QP
Sbjct: 598 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 115/293 (39%), Gaps = 44/293 (15%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
+D YN L+ + FL ++ +G++P+ TY LI C N+
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI---------CGLFNM 588
Query: 141 EGATKILEFM----RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+ ++F R+ P ++ +I G +A + M ++P+
Sbjct: 589 NKVEEAIQFWDDCKRNGMLP-DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 197 YTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAE 249
Y L+ Y + G + K + P S + T+L+ + + S + A+
Sbjct: 648 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY-------TSLIKGMSIISRVEEAK 700
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+ M GLEP+ YT L+ GY K G M V LL + S V+ + I + + +
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN--KITYTVMIG 758
Query: 310 GHGE--YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
G+ + E S ++ M + G+ P + TY + + GY K G
Sbjct: 759 GYARDGNVTEASRLL------------NEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 129/326 (39%), Gaps = 41/326 (12%)
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
I+ +C+ G +E A K+ M + + FN +I G A M + G+
Sbjct: 267 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 326
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMAS 247
EP+ TY+ L+ G + I LK ++ + + N LI + + +
Sbjct: 327 EPTLITYSILVKGLTR---AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 383
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
A I +M GL ++ TY L+ GY K+G D+ RLL + S N +
Sbjct: 384 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN--------- 434
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG------LEPSAQTYTKLMCGYAKHGD 361
G + ++++C +C H + + G + P T L+ G KHG
Sbjct: 435 ---QGSF----TSVICL--LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 485
Query: 362 MDSIRRLLAQ--NGSSLVNGDYLD-IIHALAVSGHGEYIDEI--ISKIQPGVGYSADAAN 416
L Q N +V+ + ++H L +G +DE I K G G D +
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK---LDEAFRIQKEILGRGCVMDRVS 542
Query: 417 H---IYHLINKGQIDAAYRIVNTLAR 439
+ I K ++D A+ ++ + +
Sbjct: 543 YNTLISGCCGKKKLDEAFMFLDEMVK 568
>gi|413936133|gb|AFW70684.1| hypothetical protein ZEAMMB73_229858 [Zea mays]
Length = 375
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 138/329 (41%), Gaps = 34/329 (10%)
Query: 85 HYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
+YN +L+ + E + L ++ S+ PN T + I+ C+ G ++ T
Sbjct: 47 NYNTVLKGFCSIERWVDANEILDEVVSENCPPNEATL------NVTINTLCRKGLLQKVT 100
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT---KLM 201
+ LE M + +NA+I G + ++ SA +L+ M G +P TY K +
Sbjct: 101 RYLEKMSKHGCTTNVVTYNAIIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGL 160
Query: 202 CGYAKHGDMDSIKTKIPS---LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
C + D + + K+ L+ S SF LIL A + M +
Sbjct: 161 CSADRWEDAEELMIKMSQNDRLRDNSTFNTIISFWCQKGLIL------QALEVFKQMPEK 214
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
G P++ TY+ ++ G K M+ LL + + N D + ++ +++ + I+EV
Sbjct: 215 GCNPNSTTYSTIIGGLVKASKMEQALELLNEMANKGFNTDKMYLVLTKSLNKE-DKIEEV 273
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
+V H L+ +G+ P Y ++ G ++G + +LA S
Sbjct: 274 VQVV-------HKLQ-----DSGISPQTVLYNTVLLGLCRNGKTNYAIDVLADMVSCGCM 321
Query: 379 GD---YLDIIHALAVSGHGEYIDEIISKI 404
D Y+ +I L G+ + E++S++
Sbjct: 322 PDESTYIILIEGLFYEGYLKEARELLSRL 350
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 117/303 (38%), Gaps = 28/303 (9%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ ++G EPN VTY + +I C++G+++ A ++L + ++ + +N ++ G
Sbjct: 1 MRAEGCEPNNVTY------NVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKG 54
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
A IL + P+ T + + G + + + +
Sbjct: 55 FCSIERWVDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTN 114
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYT---KLMCGYAKHGDMDSVRR 285
++ + ++ SA +L+ M G +P TY K +C + D + +
Sbjct: 115 VVTYNAIIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMI 174
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE-GPMMSQAGLEP 344
++Q+ N + II + C + LE M + G P
Sbjct: 175 KMSQNDRLRDNSTFNTII----------------SFWCQKGLILQALEVFKQMPEKGCNP 218
Query: 345 SAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD--YLDIIHALAVSGHGEYIDEIIS 402
++ TY+ ++ G K M+ LL + + N D YL + +L E + +++
Sbjct: 219 NSTTYSTIIGGLVKASKMEQALELLNEMANKGFNTDKMYLVLTKSLNKEDKIEEVVQVVH 278
Query: 403 KIQ 405
K+Q
Sbjct: 279 KLQ 281
>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 137/341 (40%), Gaps = 47/341 (13%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
DF A+L+S G EP VTY + L+ + + G A +L+ M + P +N
Sbjct: 309 DFFAELKSCGYEPGTVTY------NALLQVFGKAGVYTEALSVLKEMEENNCPADSVTYN 362
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
L+ +++A A ++ MM+Q G+ P+A TYT ++ Y K G D S+K
Sbjct: 363 ELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA 422
Query: 224 SELFLCFSFQLT--NLLILVSSDMASAEGI--LTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
C T +L ++ S E I L M G P+ T+ ++ G
Sbjct: 423 G----CVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGM 478
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
V R+ + S D D + L +S +G EV A + M++
Sbjct: 479 DKFVNRVFREMKSCGFEPDR-DTFNTL-ISAYGRCGSEVDASKMYGE----------MTR 526
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSSLVNGDYLDIIHALAVSGHGEY 396
AG TY L+ A+ GD S +++ G Y ++ A G+ Y
Sbjct: 527 AGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGN--Y 584
Query: 397 IDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTL 437
+ I +I+ G IN+GQI ++ ++ TL
Sbjct: 585 LG--IERIEEG--------------INEGQIFPSWMLLRTL 609
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 116/270 (42%), Gaps = 30/270 (11%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+++S G EP+R T+ LIS Y + G+ A+K+ M F +NAL+
Sbjct: 488 EMKSCGFEPDRDTFNTLIS------AYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLN 541
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
++ D S E +++ M G +P+ +Y+ ++ YAK G+ I+ +I + ++F
Sbjct: 542 ALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIE-RIEEGINEGQIF 600
Query: 228 LCFSFQLTNLLILVS---SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
S+ L L+L + +A +E T+ + G +P + ++ + ++ D
Sbjct: 601 P--SWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAE 658
Query: 285 RLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
+L +N D Y ++ G +E+ + ++
Sbjct: 659 GILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKT---------------LEKSQ 703
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
L+P +Y ++ G+ + G M R+L++
Sbjct: 704 LKPDLVSYNTVIKGFCRKGLMQEAVRMLSE 733
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/391 (19%), Positives = 138/391 (35%), Gaps = 87/391 (22%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI-------------------- 125
YNA+L + + L ++S G PNR T+ ++
Sbjct: 431 YNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMK 490
Query: 126 ---------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
+ + LIS Y + G+ A+K+ M F +NAL+ ++ D
Sbjct: 491 SCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWR 550
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT--------------------- 215
S E +++ M G +P+ +Y+ ++ YAK G+ I+
Sbjct: 551 SGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLL 610
Query: 216 ----KIPSLKPQSELFLCFSFQLTNLLILVSSDMAS----------AEGILTMMSQAGLE 261
K +L F F +++ + M S AEGIL + + GL
Sbjct: 611 LANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLN 670
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSG-HGEYIDE 317
P TY LM Y + G+ +L S + D Y +I G E +
Sbjct: 671 PDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRM 730
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK---HGDMDSIRRLLAQNGS 374
+S M++ G+ P TY + GY +G+++ + +A+N
Sbjct: 731 LSE----------------MTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDC 774
Query: 375 SLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
+ ++ +G + +SKI+
Sbjct: 775 RPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 805
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 19/174 (10%)
Query: 71 SVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKL 130
S+H L+ D+ YN+L+ +Y+ + + L LE ++P+ V+Y +I
Sbjct: 663 SIHEDGLNP--DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKG--- 717
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
+C+ G ++ A ++L M ++ +N + G++ E ++ M++
Sbjct: 718 ---FCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVIECMAKNDC 774
Query: 191 EPSAQTYTKLMCGYAKHGD----MDSIKTKIPSLKPQSELFLCFSFQLTNLLIL 240
P+ T+ ++ GY + G MD + +KI + P CF Q L L
Sbjct: 775 RPNELTFKMVVDGYCRAGKYSEAMDFV-SKIKTFDP------CFDDQSIQRLAL 821
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 114/286 (39%), Gaps = 46/286 (16%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
++ YNALL S + ++ ++S+G +P +Y S ++ Y + GN G
Sbjct: 533 VTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY------SLMLQCYAKGGNYLG 586
Query: 143 ATKILEFMRD-KTFPI-------------------SEG---------------VFNALIY 167
+I E + + + FP SE +FN+++
Sbjct: 587 IERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLS 646
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
++ N AEGIL + + GL P TY LM Y + G+ + + +L+
Sbjct: 647 IFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKP 706
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK---HGDMDSVR 284
S+ M A +L+ M++ G+ P TY + GY +G+++ V
Sbjct: 707 DLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEIEDVI 766
Query: 285 RLLAQSGSSLVNGDYLDIIHALAVSG-HGEYIDEVSAIVCFVNICF 329
+A++ + ++ +G + E +D VS I F + CF
Sbjct: 767 ECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTF-DPCF 811
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 124/302 (41%), Gaps = 36/302 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNAL+ + + +G+ PN VTY S LI +C+ G ++ A
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTY------SILIDSFCKRGKLDVALH 411
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
L M + + +++LI GH + + +A+ + M GL+P+ YT L+ GY
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471
Query: 206 KHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
K G++ + + + P + F L + ++ MA A + M + +
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCH-----ANRMAEANKLFGEMVEWNV 526
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
P+ TY L+ G+ K G+ LL + + D Y +I L +G
Sbjct: 527 IPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGR------ 580
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLE---PSAQTYTKLMCGYAKHGDMDS----IRRLLA 370
VS F+N L+G +E P+ TYT L+ G K G MD R +LA
Sbjct: 581 VSEAREFMND----LQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLA 636
Query: 371 QN 372
N
Sbjct: 637 SN 638
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 115/293 (39%), Gaps = 30/293 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y A++R + + + + ++ES G + + TY I C++ +
Sbjct: 214 DVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRG------LCKNQRVW 267
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + K G + L+ G + + + E ++ M + G PS + L+
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLV 327
Query: 202 CGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMM 255
G K G++ S + K+ LF + N LI + AE + M
Sbjct: 328 DGLRKKGNIGSAFDLVNKVKKFGVAPSLF------VYNALINSMCKDGKLDEAESLFNNM 381
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
GL P+ TY+ L+ + K G +D L + + ++ +SGH +
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYP--YSSLISGHCKLG 439
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
+A F M GL+P+ YT L+ GY K G++ + RL
Sbjct: 440 KLRAAKSLF----------DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRL 482
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 101/526 (19%), Positives = 199/526 (37%), Gaps = 67/526 (12%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI--------------- 125
L ++ YN +R N+ + + L +G+ + TY L+
Sbjct: 248 LSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEM 307
Query: 126 --------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+ S L+ + GNI A ++ ++ S V+NALI +
Sbjct: 308 MNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCK 367
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
+ AE + M GL P+ TY+ L+ + K G +D + L +E+ + +
Sbjct: 368 DGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLD---VALHFLGKMTEVGIKAT 424
Query: 232 FQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
+ LI + +A+ + M GL+P+ YT L+ GY K G++ + RL
Sbjct: 425 VYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYH 484
Query: 289 QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
+ ++ + ++ H + E + + G M+ + + P+ T
Sbjct: 485 EMTGKGISPNTYTFTALISGLCHANRMAEANKLF-----------GEMV-EWNVIPNEVT 532
Query: 349 YTKLMCGYAKHGDMDSIRRLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
Y L+ G+ K G+ LL + G Y +I L +G E ++ +Q
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592
Query: 406 PGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG 465
N I + A ++N L + ++ +L L R M+ +N
Sbjct: 593 G----EQQKLNEIEGCLPNVVTYTA--LINGLCKIGLMDKAEL-----LCREMLASNS-- 639
Query: 466 VGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDK 525
+ A + +L ++G I+ A ++ + L N + L+R K + I +
Sbjct: 640 LPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNI---LIRGFCKLGR-IQE 695
Query: 526 VLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQ 571
V + D + P + + +I + + D A++ +E +N+
Sbjct: 696 AAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNR 741
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+R + + L + GI P+ ++Y S +I +YC+ G+++ A K
Sbjct: 680 YNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISY------STIIYEYCRRGDLKEAIK 733
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+ E M ++ +N LIYG ++ A + M + G++P+ TY L+ G
Sbjct: 734 LWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791
>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19440, chloroplastic; Flags: Precursor
Length = 838
Score = 70.1 bits (170), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 14/201 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ ++ E T +F ++ S+ ++PN V Y LI YC+ G +
Sbjct: 622 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR------AYCRSGRLS 675
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ E M+ K + + +LI G S + + A+ + M GLEP+ YT L+
Sbjct: 676 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 735
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL----VSSDMASAEGILTMMSQ 257
GY K G M ++ + + ++ ++T +++ ++ A +L M +
Sbjct: 736 DGYGKLGQMVKVECLLREMHSKN----VHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 791
Query: 258 AGLEPSAQTYTKLMCGYAKHG 278
G+ P + TY + + GY K G
Sbjct: 792 KGIVPDSITYKEFIYGYLKQG 812
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 140/346 (40%), Gaps = 63/346 (18%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F K+ +G+EP +TY S L+ + I A +L+ M K FP + V+N
Sbjct: 330 FKEKMVERGMEPTLITY------SILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNN 383
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
LI +A + A I +M GL ++ TY L+ GY K+G D+ + + +
Sbjct: 384 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM---- 439
Query: 225 ELFLCFSFQ---LTNLLILVSSDMA--SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
L + F+ T+++ L+ S + SA + M + P T L+ G KHG
Sbjct: 440 -LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 498
Query: 280 MDSVRRLLAQSGSSLVNGDYLD------IIHALA--------------VSGHGEYIDEVS 319
L Q L G +D ++H L + G G +D VS
Sbjct: 499 HSKALELWFQ---FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVS 555
Query: 320 AIVCFVNIC--------FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
C F +L+ M + GL+P TY+ L+CG +M+ + +
Sbjct: 556 YNTLISGCCGKKKLDEAFMFLDE--MVKRGLKPDNYTYSILICGLF---NMNKVEEAIQF 610
Query: 372 NGSSLVNGDYLDI-IHALAVSG---------HGEYIDEIISK-IQP 406
NG D+ +++ + G E+ DE++SK +QP
Sbjct: 611 WDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 656
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 115/293 (39%), Gaps = 44/293 (15%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
+D YN L+ + FL ++ +G++P+ TY LI C N+
Sbjct: 551 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI---------CGLFNM 601
Query: 141 EGATKILEFM----RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+ ++F R+ P ++ +I G +A + M ++P+
Sbjct: 602 NKVEEAIQFWDDCKRNGMLP-DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 660
Query: 197 YTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAE 249
Y L+ Y + G + K + P S + T+L+ + + S + A+
Sbjct: 661 YNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY-------TSLIKGMSIISRVEEAK 713
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+ M GLEP+ YT L+ GY K G M V LL + S V+ + I + + +
Sbjct: 714 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN--KITYTVMIG 771
Query: 310 GHGE--YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
G+ + E S ++ M + G+ P + TY + + GY K G
Sbjct: 772 GYARDGNVTEASRLL------------NEMREKGIVPDSITYKEFIYGYLKQG 812
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 129/326 (39%), Gaps = 41/326 (12%)
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
I+ +C+ G +E A K+ M + + FN +I G A M + G+
Sbjct: 280 INAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM 339
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMAS 247
EP+ TY+ L+ G + I LK ++ + + N LI + + +
Sbjct: 340 EPTLITYSILVKGLTR---AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNK 396
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
A I +M GL ++ TY L+ GY K+G D+ RLL + S N +
Sbjct: 397 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN--------- 447
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG------LEPSAQTYTKLMCGYAKHGD 361
G + ++++C +C H + + G + P T L+ G KHG
Sbjct: 448 ---QGSF----TSVICL--LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 498
Query: 362 MDSIRRLLAQ--NGSSLVNGDYLD-IIHALAVSGHGEYIDEI--ISKIQPGVGYSADAAN 416
L Q N +V+ + ++H L +G +DE I K G G D +
Sbjct: 499 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK---LDEAFRIQKEILGRGCVMDRVS 555
Query: 417 H---IYHLINKGQIDAAYRIVNTLAR 439
+ I K ++D A+ ++ + +
Sbjct: 556 YNTLISGCCGKKKLDEAFMFLDEMVK 581
>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
Length = 700
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 108/268 (40%), Gaps = 22/268 (8%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L L G+ P V Y LI+ YCQ ++ GA I E M+ + +NAL
Sbjct: 357 LEMLVHTGLVPTTVIYNTLING------YCQVRDLRGAFCIFEQMKSRHIRPDHITYNAL 410
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I G + + AE ++ M ++G++PS +T+ L+ Y G ++ T + ++ +
Sbjct: 411 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
SF + + A IL M + P+AQ Y ++ Y + GD +
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFL 530
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
L+ + +S V+ + + L + G IDE ++ + GL
Sbjct: 531 LVEKMKNSGVSASI--VTYNLLLKGLCRSSQIDEAEELI------------YTLRNQGLR 576
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
P +Y ++ GD D LL +
Sbjct: 577 PDVVSYNTIISACCNKGDTDKALELLQE 604
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 113/294 (38%), Gaps = 27/294 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNAL+ E D + ++E G++P+ T+ + LI Y G +E
Sbjct: 407 YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF------NTLIDAYGTAGQLEKCFT 460
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M+ K F +++ + + A IL M + P+AQ Y ++ Y
Sbjct: 461 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 520
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ GD + + +K ++ L + SS + AE ++ + GL P
Sbjct: 521 ESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN---GDYLDIIHALAVSGHGEYIDEVSAIV 322
+Y ++ GD D LL + + Y ++ ALA +G V +
Sbjct: 581 SYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGR------VHDME 634
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK---HGDMDSIRRLLAQNG 373
C H +EPS+ Y ++ Y + + S+++ +++ G
Sbjct: 635 CLYQQMLH---------KNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 98/515 (19%), Positives = 190/515 (36%), Gaps = 84/515 (16%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I+ + G A K+ + M D + +N +I GH + D+ + + M G
Sbjct: 200 VIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHDG 259
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL------------TNL 237
+P+ TY L+ G + G MD + + + S F++ + T L
Sbjct: 260 PKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTML 319
Query: 238 LILVSS-----------------------DMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+ S +A AE +L M+ GL P+ Y L+ GY
Sbjct: 320 SLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGY 379
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
+ D+ + Q S + D+ I + ++G +C + + +
Sbjct: 380 CQVRDLRGAFCIFEQMKSRHIRPDH--ITYNALING-----------LCKLEMVTKAEDL 426
Query: 335 PM-MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL---DIIHALAV 390
M M ++G++PS +T+ L+ Y G ++ +L+ + D + ++ A
Sbjct: 427 VMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCK 486
Query: 391 SGH-GEYIDEIISKIQPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLAR---SANING 445
+G E + + I V +A N I I G + A+ +V + SA+I
Sbjct: 487 NGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVT 546
Query: 446 EQLPVGGFLVRHMVKTNQPGV------GYSADAANH---IYHLINKGQIDAAYRIVNTLA 496
L + G + + + G D ++ I NKG D A ++ +
Sbjct: 547 YNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMN 606
Query: 497 RSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTD-ENLHPRAFNLAVLIKAHVLK 555
+ + +R ++T + LA R+ D E L+ + + V + +
Sbjct: 607 K-------------YGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI-- 651
Query: 556 EDYTGAVETFEYCVNQFRATPWKGELLKRFIQAED 590
Y V+ + C N + K E+ ++ I +D
Sbjct: 652 --YGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 684
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 73/155 (47%), Gaps = 11/155 (7%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
DV + YN+++ Y+++ T + K+++ G+ + VTY L+ C+
Sbjct: 504 DVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKG------LCRS 557
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
I+ A +++ +R++ +N +I D A +L M++ G+ P+ +TY
Sbjct: 558 SQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTY 617
Query: 198 TKLMCGYAKHG---DMDSIKTKI--PSLKPQSELF 227
L+ A G DM+ + ++ +++P S ++
Sbjct: 618 HTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 652
>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 484
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTIINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMTEARS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVL 314
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 109/278 (39%), Gaps = 24/278 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL + + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDIPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTIINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPG 407
TYT L+ GY +D RL+ + + + + L + E + E S ++
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEM 281
Query: 408 V-GYSADAANHIYHLI-----NKGQIDAAYRIVNTLAR 439
+ Y A N I+ + N G +DAA ++ + R
Sbjct: 282 MDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIR 319
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 64/160 (40%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+EP+ T+ ++ G+ G +++ +K + ++ M AE
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTIINGYYRVKKMEEAE 205
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
M +EP+ TYT L+ GY +D RL+ +
Sbjct: 206 KYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEE 245
>gi|357120957|ref|XP_003562190.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g53170-like [Brachypodium distachyon]
Length = 454
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 16/214 (7%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+VP DI N+++ Y + + ++ + G+EP+ T+ +I + Y +
Sbjct: 232 NVP-DIYTMNSIIWAYGNRGRVDDMEKWYSEFQLMGVEPDSRTFNIMIKS------YGKA 284
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
E +L++M+ + F + FN +I +A D+ E +M G++P+ TY
Sbjct: 285 NMHEKMMMVLKYMKRRFFSPTAATFNIIIECFGRAGDIEKMEYYFRLMKIQGIKPNPITY 344
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSE-LFLCFSFQLTNLLI---LVSSDMASAEGILT 253
L+ GY+K G +D K+P++ Q+E + N +I S D+ E +L
Sbjct: 345 CSLVNGYSKAGILD----KVPAIIRQTENTDVVLDTPFFNCVINAYAKSGDIKIMEEMLQ 400
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+M + +P YT ++ Y HG MD +LL
Sbjct: 401 LMKEKKCKPGKVIYTTMIQAYIAHG-MDEAAKLL 433
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
N++I+ + + E + G+EP ++T+ ++ Y K + + + +K
Sbjct: 239 MNSIIWAYGNRGRVDDMEKWYSEFQLMGVEPDSRTFNIMIKSYGKANMHEKMMMVLKYMK 298
Query: 222 PQSELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ F + N++I + D+ E +M G++P+ TY L+ GY+K G
Sbjct: 299 RR---FFSPTAATFNIIIECFGRAGDIEKMEYYFRLMKIQGIKPNPITYCSLVNGYSKAG 355
Query: 279 DMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
+D V ++ Q+ ++ V D + +I+A A SG + ++E+
Sbjct: 356 ILDKVPAIIRQTENTDVVLDTPFFNCVINAYAKSGDIKIMEEMLQ--------------- 400
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+M + +P YT ++ Y HG MD +LL
Sbjct: 401 LMKEKKCKPGKVIYTTMIQAYIAHG-MDEAAKLL 433
Score = 40.8 bits (94), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 128/309 (41%), Gaps = 33/309 (10%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKT-FPISEGVFNALIYGHSQANDMASAEGILTMMS 186
+ L+ Y G ++ A +E M+ E F+ LI ++ +L MS
Sbjct: 133 TALVGAYGYSGMLDEALATVELMKGAADCKPDEYTFSILINCCCKSRRFDLIPPVLDEMS 192
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
G+ + + ++ GY K G + + T + ++ + N +I +
Sbjct: 193 YLGIGCNVVIHNAIIDGYGKAGMLAEMGTALCNMLEDGDNVP--DIYTMNSIIWAYGNRG 250
Query: 247 SAEGILTMMSQ---AGLEPSAQTYTKLMCGYAK---HGDMDSVRRLLAQSGSSLVNGDYL 300
+ + S+ G+EP ++T+ ++ Y K H M V + + + S +
Sbjct: 251 RVDDMEKWYSEFQLMGVEPDSRTFNIMIKSYGKANMHEKMMMVLKYMKRRFFSPTAATFN 310
Query: 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
II +G E ++ ++ +M G++P+ TY L+ GY+K G
Sbjct: 311 IIIECFGRAGDIEKME-------------YYFR--LMKIQGIKPNPITYCSLVNGYSKAG 355
Query: 361 DMDSIRRLLAQ--NGSSLVNGDYLD-IIHALAVSGHGEYIDEII-----SKIQPG-VGYS 411
+D + ++ Q N +++ + + +I+A A SG + ++E++ K +PG V Y+
Sbjct: 356 ILDKVPAIIRQTENTDVVLDTPFFNCVINAYAKSGDIKIMEEMLQLMKEKKCKPGKVIYT 415
Query: 412 ADAANHIYH 420
+I H
Sbjct: 416 TMIQAYIAH 424
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 124/297 (41%), Gaps = 32/297 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D YNALL VY + T + L ++E G P+ VTY LIS Y +DG
Sbjct: 136 VP-DKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNS------LISAYARDG 188
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A ++ M + + + L+ G +A SA + M AG +P+ T+
Sbjct: 189 LLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFN 248
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS-AEGILTMMSQ 257
L+ + G + +K + ++ T L + + M S G+ M +
Sbjct: 249 ALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWN-TLLAVFGQNGMDSEVSGVFKEMKR 307
Query: 258 AGLEPSAQTYTKLMCGYAKHGD----MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
AG P TY L+ Y++ G MD +R+L ++G + Y ++ ALA G E
Sbjct: 308 AGFVPERDTYNTLISAYSRCGSFDQAMDIYKRML-EAGITPDLSTYNAVLAALARGGLWE 366
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+++ A M +P+ TY L+ YA + I R+LA
Sbjct: 367 QSEKIFA---------------EMKDGRCKPNELTYCSLLHAYANGKE---IGRMLA 405
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 143/331 (43%), Gaps = 32/331 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAK-LESQGIEPNRVTYQQLISNSKLISKYCQDGNI-EGA 143
YN +L VY ++ L + +++ G+ P+ TY LI+ C+ G++ E A
Sbjct: 71 YNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLIT-------CCRRGSLHEEA 123
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+ + M+ F + +NAL+ + ++ A +L M G PS TY L+
Sbjct: 124 AAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISA 183
Query: 204 YAKHGDM-DSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGL 260
YA+ G + ++++ K ++ L + F T LL + + SA + M AG
Sbjct: 184 YARDGLLKEAMELKNQMVEGGINLDV---FTYTTLLSGFVRAGKDESAMRVFAEMRAAGC 240
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
+P+ T+ L+ + G + ++ + +S D + LAV G EVS
Sbjct: 241 KPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSG 300
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD----MDSIRRLLAQNGSSL 376
+ M +AG P TY L+ Y++ G MD +R+L + G +
Sbjct: 301 VF------------KEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRML-EAGITP 347
Query: 377 VNGDYLDIIHALAVSGHGEYIDEIISKIQPG 407
Y ++ ALA G E ++I ++++ G
Sbjct: 348 DLSTYNAVLAALARGGLWEQSEKIFAEMKDG 378
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 78/182 (42%), Gaps = 1/182 (0%)
Query: 101 SPTDFLAKLESQGIEPNRVTYQQLISN-SKLISKYCQDGNIEGATKILEFMRDKTFPISE 159
S D L + E +E R + +S + ++S Y + +IL FM + F S
Sbjct: 430 SKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSL 489
Query: 160 GVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS 219
+N+L+Y HS++ + +E +L + G++P +Y ++ Y ++G M
Sbjct: 490 ATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSE 549
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
++ + ++ S A ++ M + G +P+ TY ++ GY KH
Sbjct: 550 MRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNH 609
Query: 280 MD 281
D
Sbjct: 610 RD 611
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
++ YN+L+ ++ +E+ + L ++ ++GI+P+ ++Y +I YC++G ++
Sbjct: 489 LATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIF------AYCRNGRMKE 542
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A++I MR+ +N + ++ + A ++ M + G +P+ TY ++
Sbjct: 543 ASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVD 602
Query: 203 GYAKHGDMDSIKTKIPSL 220
GY KH D I SL
Sbjct: 603 GYCKHNHRDDAIMFISSL 620
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 126/343 (36%), Gaps = 65/343 (18%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP DI +N LL V+ N + +++ G P R TY LIS Y + G
Sbjct: 276 VP-DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLIS------AYSRCG 328
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ + A I + M + +NA++ ++ +E I M +P+ TY
Sbjct: 329 SFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYC 388
Query: 199 KLMCGYAKH---GDMDSIKTKIPS--LKPQSELFLCFSFQLTNLLILVSSDMASAE---- 249
L+ YA G M ++ +I S ++P + L + +LV +++A E
Sbjct: 389 SLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRK 448
Query: 250 --------------------------GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
IL M+++G PS TY LM +++ + +
Sbjct: 449 GFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERS 508
Query: 284 RRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSA----------IVCFVNICFH 330
+L + + + D Y +I A +G + + + ++ +
Sbjct: 509 EEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVAS 568
Query: 331 WLEGPMMSQA----------GLEPSAQTYTKLMCGYAKHGDMD 363
+ M A G +P+ TY ++ GY KH D
Sbjct: 569 YAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVDGYCKHNHRD 611
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 129/333 (38%), Gaps = 35/333 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ FL + S G +PN +T+ ++ + C G
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS------MCSTGRWM 326
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+L M K F S FN LI + + A IL M Q G +P++ +Y L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT--NLLILVSSD--MASAEGILTMMSQ 257
G+ K MD + + + C+ +T +L + D + A IL +S
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRG----CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY 314
G P TY ++ G AK G +LL + + + D Y ++ L+ G
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK--- 499
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---Q 371
+DE FH E + G+ P+A T+ +M G K D L
Sbjct: 500 VDEAIKF-------FHEFE-----RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI 404
G Y +I LA G + E+++++
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 135/341 (39%), Gaps = 48/341 (14%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+ V D+ YN +LR D+ + L ++ + P+ +TY LI + C
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT------C 250
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+D + A K+L+ MRD+ +N L+ G + + A L M +G +P+
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 196 TYT---KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS-----SDMAS 247
T+ + MC + MD+ K L+ FS + IL++ +
Sbjct: 311 THNIILRSMCSTGRW--MDAEKLLADMLRKG------FSPSVVTFNILINFLCRKGLLGR 362
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII---- 303
A IL M Q G +P++ +Y L+ G+ K MD L + S G Y DI+
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS---RGCYPDIVTYNT 419
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
A+ G+ D V + +S G P TY ++ G AK G
Sbjct: 420 MLTALCKDGKVEDAVEIL-------------NQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 364 SIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEII 401
+LL + + + D Y ++ L+ G +DE I
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK---VDEAI 504
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 127/378 (33%), Gaps = 95/378 (25%)
Query: 72 VHTGELD--------------VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPN 117
V TGEL+ VP DI L+R + T L LE G P+
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVP-DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGV--FNALIYGHSQANDM 175
+TY +IS YC+ G I A +L+ M +S V +N ++ + +
Sbjct: 172 VITYNVMISG------YCKAGEINNALSVLDRM-----SVSPDVVTYNTILRSLCDSGKL 220
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT 235
A +L M Q P TYT L+ +
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCR----------------------------- 251
Query: 236 NLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS-- 293
S + A +L M G P TY L+ G K G +D + L SS
Sbjct: 252 ------DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 294 --------------LVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVN-ICFHWLEG---- 334
G ++D LA + V +N +C L G
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID 365
Query: 335 --PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDII------H 386
M Q G +P++ +Y L+ G+ K MD L + S G Y DI+
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS---RGCYPDIVTYNTMLT 422
Query: 387 ALAVSGHGEYIDEIISKI 404
AL G E EI++++
Sbjct: 423 ALCKDGKVEDAVEILNQL 440
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 131/315 (41%), Gaps = 47/315 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN ++ Y + T FL + +G+EPN +T+ +I+ C+DG ++
Sbjct: 17 NVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIING------LCRDGRLK 70
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+++L M K + E +N L+ G+ + + A + M + GL P+ TYT L+
Sbjct: 71 ETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLI 130
Query: 202 CGYAKHGDMDS---------IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
K G+++ ++ P+ + + + F+ Q + A +L
Sbjct: 131 NSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQ---------GLLDEAYRVL 181
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSSLVNG---- 297
M+++G PS TY L+ G+ G M+ LL S S++++G
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241
Query: 298 DYLDIIHALAVSGHGEYI--DEVSAIVCFVNIC--FHWLEGPMMSQA----GLEPSAQTY 349
LD + V G+ + D V+ +C E M Q L P TY
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301
Query: 350 TKLMCGYAKHGDMDS 364
T L+ Y K GD++
Sbjct: 302 TTLINAYCKEGDLNK 316
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 28/194 (14%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+F ++ +G+ PN TY + +I+ + Q G ++ A ++L M F S +N
Sbjct: 144 EFFDQMHVRGLCPNERTY------TTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYN 197
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---------K 214
ALI GH M A G+L M G+ P +Y+ ++ G+A++ ++D K
Sbjct: 198 ALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGK 257
Query: 215 TKIPSLKPQSELF--LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
+ +P S L LC +LT + DM M L P TYT L+
Sbjct: 258 SVLPDAVTYSSLIQGLCEQRRLTE-----ACDMFQE------MLTIKLPPDEFTYTTLIN 306
Query: 273 GYAKHGDMDSVRRL 286
Y K GD++ L
Sbjct: 307 AYCKEGDLNKALHL 320
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 112/270 (41%), Gaps = 40/270 (14%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F ++E G PN VTY +I YC+ + A L M K + FN
Sbjct: 5 FFKEMERNGCLPNVVTYNTMIDG------YCKLKRTDEAFGFLRSMGLKGLEPNLITFNM 58
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+I G + + +L MS+ G P TY L+ GY K G+ +L +
Sbjct: 59 IINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQ------ALVLHA 112
Query: 225 ELFL-CFSFQLTNLLILVSS-----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
E+ S + L++S ++ A M GL P+ +TYT ++ G+A+ G
Sbjct: 113 EMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQG 172
Query: 279 DMDSVRRLL---AQSG--SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
+D R+L +SG S+V Y +I+ V G E AI +
Sbjct: 173 LLDEAYRVLNEMTRSGFIPSIVT--YNALINGHCVLGRME-----EAIGLLQD------- 218
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
M G+ P +Y+ ++ G+A++ ++D
Sbjct: 219 ---MVGKGVLPDVVSYSTIISGFARNQELD 245
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 84/213 (39%), Gaps = 53/213 (24%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+N +I G+ + A G L M GLEP+ T+ ++ G + G LK
Sbjct: 21 YNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG----------RLK 70
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
SE +L MS+ G P TY L+ GY K G+
Sbjct: 71 ETSE-------------------------VLVEMSRKGYVPDEVTYNTLVNGYCKEGNFH 105
Query: 282 SVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
L + ++G S Y +I+++ +G+ +N + + M
Sbjct: 106 QALVLHAEMVRNGLSPNVVTYTSLINSMCKAGN-------------LNRAMEFFD--QMH 150
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
GL P+ +TYT ++ G+A+ G +D R+L +
Sbjct: 151 VRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183
Score = 46.6 bits (109), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 15/199 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNS---------KLIS 132
D YN L+ + L KL P+ VTY LI N L+
Sbjct: 332 DAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVK 391
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C G ++ A ++ E M +K +E ++N +I+GH + ++ A + M P
Sbjct: 392 GFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVP 451
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS---SDMASAE 249
T L+ G + I + +L +L+ +L+ ++ +M
Sbjct: 452 HTVTVLALVKALFTEGMDGELNEVIGDILRSCKL---TDAELSKVLVEINQKEGNMDMVF 508
Query: 250 GILTMMSQAGLEPSAQTYT 268
+LT M++ GL PS T T
Sbjct: 509 NLLTEMAKDGLIPSTGTPT 527
Score = 41.2 bits (95), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 98/259 (37%), Gaps = 32/259 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ ++ + N+ ++ + + P+ VTY S LI C+ +
Sbjct: 227 DVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTY------SSLIQGLCEQRRLT 280
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M P E + LI + + D+ A + M Q G P A TY L+
Sbjct: 281 EACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLI 340
Query: 202 CGYAKHGDMDSIKT---------KIPSLKPQSELFL-CFSFQLTNLLILVSSD-----MA 246
G K + IPS + L C + + + + LV M
Sbjct: 341 NGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMD 400
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDY------- 299
A+ + M +P+ Y ++ G+ + G++ +L + +V+ D+
Sbjct: 401 EADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKE----MVHVDFVPHTVTV 456
Query: 300 LDIIHALAVSGHGEYIDEV 318
L ++ AL G ++EV
Sbjct: 457 LALVKALFTEGMDGELNEV 475
>gi|198434260|ref|XP_002126605.1| PREDICTED: similar to coiled-coil domain containing 134 [Ciona
intestinalis]
Length = 1310
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNALLRVYL+N H FSP FL ++ + + PN T++ ++ YC ++ A
Sbjct: 134 YNALLRVYLENNHQFSPEQFLKQMAANNVLPNSNTFE------TILKIYCMSNKLKEAEH 187
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM---SQAGLEPSAQTYTKLMC 202
+ ++M K+F I +F L Y H D + A ++ S+ L+ + T L
Sbjct: 188 VFKYMMSKSFVIHHTIFGNLAYAHCMLGDPSQAINMVQTTIDSSKTNLKSTWSIVTLLCF 247
Query: 203 GYAKHGD 209
G + G+
Sbjct: 248 GLIRSGN 254
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 134/325 (41%), Gaps = 55/325 (16%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN--------------- 127
I+ + L+ Y HT LA + G +PN VT+ +I+
Sbjct: 90 IATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149
Query: 128 --------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
LI+ ++G I+ A +L+ M + + +++ALI G +
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLM---CGYAKHGDMDSIKTKI--PSLKPQSELFL 228
++ A G+ + + + G+ A TY L+ C + ++ + TK+ ++ P
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDD---- 265
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
++F + + + A+G+L MMS+ G +P TY LM GY ++ R L
Sbjct: 266 -YTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 289 QSGSSLVNGDYLDIIHALAVSGH--GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
+ + D L+ + + + G+ + +DE A+V F +C L P+
Sbjct: 325 RMVKRGLEPDVLN--YNVLIDGYCKTKMVDE--AMVLFKELC----------NKNLVPTI 370
Query: 347 QTYTKLMCGYAKHGDMDSIRRLLAQ 371
+Y L+ G G + +++LL +
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDE 395
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 109/322 (33%), Gaps = 82/322 (25%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI---------------- 125
DI YNAL+ Y E+ + ++ +G+EP+ + Y LI
Sbjct: 299 DIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358
Query: 126 -------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
S + LI C G I K+L+ M P +N LI +
Sbjct: 359 KELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKE 418
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+ A G+L MM + G++P+ TY +M GY
Sbjct: 419 GRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC--------------------------- 451
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
+ +++ A+ I M ++GLEP Y L+ GY K +D L +
Sbjct: 452 --------LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRH 503
Query: 293 SLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY 349
+ D Y +I L G ++ E+ +C +G P TY
Sbjct: 504 KNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC---------------DSGQSPDVITY 548
Query: 350 TKLMCGYAKHGDMDSIRRLLAQ 371
L+ + K D L Q
Sbjct: 549 NILLDAFCKTQPFDKAISLFRQ 570
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/326 (21%), Positives = 132/326 (40%), Gaps = 38/326 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+AL+ + +++ +GI + VTY LI C G + T+
Sbjct: 198 YSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGC------CSVGRWQEVTQ 251
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M + + FN LI + + A+G+L MMS+ G +P TY LM GY
Sbjct: 252 LLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYC 311
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV-----SSDMASAEGILTMMSQAGL 260
++ + + + + N +L+ + + A + + L
Sbjct: 312 SRENVHEARELFNRMVKRG-----LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNL 366
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
P+ +Y L+ G G + V++LL + S D Y +I AL G ++
Sbjct: 367 VPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALC--KEGRILEA 424
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
+ +V MM + G++P+ TY +M GY +++ + + + S +
Sbjct: 425 LGVLV-------------MMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGL 471
Query: 378 NGDYLDIIHALAVSGH--GEYIDEII 401
D L+ + + ++G+ E +DE I
Sbjct: 472 EPDILN--YNVLINGYCKTEMVDEAI 495
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 13/211 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YNA++ Y + D ++ G+EP+ + Y + LI+ YC+ ++
Sbjct: 439 NIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNY------NVLINGYCKTEMVD 492
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + MR K +N+LI G + + +L M +G P TY L+
Sbjct: 493 EAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILL 552
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQA 258
+ K D K SL Q + F + ++ + AE L +
Sbjct: 553 DAFCKTQPFD----KAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH 608
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
G P+ QTYT L+ K G LL++
Sbjct: 609 GCSPNVQTYTILINALCKDGSFGEAMLLLSK 639
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 138/365 (37%), Gaps = 43/365 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YNA++ + DF ++E +GI PN VTY L++ C
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG------LCNSSRWS 242
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M K + ++AL+ + + A+ + M + ++P TY+ L+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G H +D + + L S+ + + + MSQ GL
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY---- 314
+ TY L+ G+ + GD+D + +Q ++ D Y ++ L +G E
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 315 ----------IDEVSAIVCFVNICFH------WLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+D V+ +C W +S GL+P TYT +M G
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 359 HGDMDSIRRL--------LAQNGSSLVNGDYL---DIIHALAVSGHGEYIDEIISKIQPG 407
G + + L L +N +L +GD ++I + G Y ++ I+ G
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCG---YAPSLLKDIKSG 539
Query: 408 VGYSA 412
V A
Sbjct: 540 VCKKA 544
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 119/310 (38%), Gaps = 58/310 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ +N ++ + L K+ G EP+RVT L++ +C+ +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNG------FCRRNRVS 172
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL- 200
A +++ M + + +NA+I + + A + + G+ P+ TYT L
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 201 --MCGYAKHGDM-----DSIKTKI-PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+C ++ D D IK KI P++ S L F + + + A+ +
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF---------VKNGKVLEAKELF 283
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR---LLAQSG--------SSLVNGDYLD 301
M + ++P TY+ L+ G H +D + L+ G ++L+NG
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING---- 339
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
A V + E MSQ GL + TY L+ G+ + GD
Sbjct: 340 FCKAKRVEDGMKLFRE-------------------MSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 362 MDSIRRLLAQ 371
+D + +Q
Sbjct: 381 VDKAQEFFSQ 390
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 128/343 (37%), Gaps = 64/343 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ QG++P+ VT+ S LI C++G +
Sbjct: 271 DVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTF------SVLIDTLCKEGKVT 324
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+LE M + + +N+LI G D+ SA + M GLEP +YT L+
Sbjct: 325 EAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLI 384
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K + + A + M Q G
Sbjct: 385 NGYCK-----------------------------------TWKVKEAMNLYNEMLQVGKS 409
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL------AQSGSSLVNGDYLD-IIHALAVSGHGEY 314
P+ TY L+ G + G + ++L S +S + G +LD + + E
Sbjct: 410 PNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMEL 469
Query: 315 IDEVSAIVCFVNI----CF------------HWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+E+ + +NI C W +SQ GL+P TY ++ G+ K
Sbjct: 470 FNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCK 529
Query: 359 HGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEII 401
G +D+ L + + D + L G ++E+I
Sbjct: 530 VGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVI 572
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 118/306 (38%), Gaps = 43/306 (14%)
Query: 97 EHTFS-PTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI-LEFMRDKT 154
EH S T +++ G PN VTY LI CQ GN+ A K+ E + D +
Sbjct: 174 EHRISEATRLFLRMQKLGCTPNAVTY------GTLIKGLCQTGNVNIALKLHKEMLNDAS 227
Query: 155 ---FPISEGV--FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 209
GV ++ +I G + A+ + M G+ P +Y+ L+ G+ G
Sbjct: 228 QYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGK 287
Query: 210 MDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTK 269
D K + Q +F + + + A+ +L +M Q G+ P+ TY
Sbjct: 288 WDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNS 347
Query: 270 LMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICF 329
L+ G+ GD++S R L L++ G DE+S C
Sbjct: 348 LIDGFCMVGDLNSARELF------------------LSMPSKGLEPDEISYTTLINGYCK 389
Query: 330 HWLEGPMMS------QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL------AQNGSSLV 377
W M+ Q G P+ TY L+ G + G + ++L + +S +
Sbjct: 390 TWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQI 449
Query: 378 NGDYLD 383
G +LD
Sbjct: 450 YGIFLD 455
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 171/425 (40%), Gaps = 57/425 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP ++ Y LL + T + +++ G +PN +TY LI + + G
Sbjct: 120 VP-NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQH------LSRAG 172
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
I+ A +++ R P ++ G +A+ + A + M Q G+ P+ TY+
Sbjct: 173 EIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYS 232
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD-MASAEGILTMMSQ 257
L+ G+ +HG++D + K + L + L L + + A + + Q
Sbjct: 233 NLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQ 292
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY 314
+G+ P TY+ L+ +A+ G D+ LL + V D Y +I+ L ++
Sbjct: 293 SGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLC--KERKF 350
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGS 374
D F LE +M AG P+ TY +M G K G MD + R+
Sbjct: 351 QD-----------AFRLLE--LMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLK 397
Query: 375 SLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN---KGQID 428
S + D Y I++ L+ +G D+A ++ LI +G
Sbjct: 398 SRCSPDVVTYSIIMNGLSKAGM------------------LDSAVKLFELIKSSREGPDA 439
Query: 429 AAYR-IVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDA 487
AAY ++ +L R+ + + G + H ++ G A + L + + D+
Sbjct: 440 AAYSMVITSLCRAGKL---EEACGMY---HGMEVTVAGDNICRALAGLVAALCDAKRTDS 493
Query: 488 AYRIV 492
A RIV
Sbjct: 494 ARRIV 498
>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
Length = 950
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G++ + ++ + MR + FN LI G + M A IL M+ AG
Sbjct: 593 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 652
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+ + TYTK+M GYA GD L+ + F+++ S M SA
Sbjct: 653 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 712
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
+ MS + ++ Y L+ G+A+ GD+ L+ Q V D Y I A
Sbjct: 713 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 772
Query: 307 AVSGH----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+ +G + I+E+ A+ G++P+ +TYT L+ G+A+
Sbjct: 773 SKAGDMNRATQTIEEMEAL-------------------GVKPNIKTYTTLIKGWAR 809
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 81/191 (42%), Gaps = 41/191 (21%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +++ Y T ++ +L+++G++ + TY+ L+ C+ G ++ A
Sbjct: 660 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKAC------CKSGRMQSALA 713
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + P + V+N LI G ++ D+ A ++ M + G++P TYT + +
Sbjct: 714 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACS 773
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K GDM+ A + M G++P+ +
Sbjct: 774 KAGDMN-----------------------------------RATQTIEEMEALGVKPNIK 798
Query: 266 TYTKLMCGYAK 276
TYT L+ G+A+
Sbjct: 799 TYTTLIKGWAR 809
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 143/369 (38%), Gaps = 55/369 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +L+ Y + K++ +GIE + VTY S ++ + + G+ E A
Sbjct: 345 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY------SVIVGGFSKAGHAEAADY 398
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + ++ ++ +IY H Q +M AE ++ M + G++ Y +M GY
Sbjct: 399 WFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYT 458
Query: 206 -----KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
K G + + K P + C L NL V ++ A + +M + G+
Sbjct: 459 MVADEKKGLVVFKRLKECGFTPTVVTYGC----LINLYTKVGK-ISKALEVSRVMKEEGV 513
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
+ + +TY+ ++ G+ K D + + + D Y +II A G+ +D
Sbjct: 514 KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN---MDR 570
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM-------DSIRRLLA 370
V M + P+ +T+ ++ GYAK GDM D +RR
Sbjct: 571 AIQTV------------KEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 618
Query: 371 QNGSSLVNGDYLDIIHALAVSGHGEYIDEII-----------SKIQPG---VGYSADAAN 416
NG ++ + E +DE+ +KI G VG + A
Sbjct: 619 VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 678
Query: 417 HIYHLINKG 425
+ L N+G
Sbjct: 679 YFTRLQNEG 687
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 106/263 (40%), Gaps = 30/263 (11%)
Query: 114 IEPNRVTYQQLISNSKLISK------------YCQDGNIEGATKILEFMRDKTFPISEGV 161
++ N +Q +IS + ISK Y + G++ A + E MR + + +
Sbjct: 285 LDTNGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 344
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+ +LI+ ++ DM A + M + G+E S TY+ ++ G++K G ++ K
Sbjct: 345 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 404
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
+ + + +M AE ++ M + G++ Y +M GY D
Sbjct: 405 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 464
Query: 282 S---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
V + L + G + Y +I+ G EVS + M
Sbjct: 465 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRV---------------MK 509
Query: 339 QAGLEPSAQTYTKLMCGYAKHGD 361
+ G++ + +TY+ ++ G+ K D
Sbjct: 510 EEGVKHNLKTYSMMINGFVKLKD 532
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
LDV DI Y ALL+ + S ++ ++ I N Y LI + +
Sbjct: 688 LDV--DIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG------WAR 739
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G++ A +++ M+ + + + I S+A DM A + M G++P+ +T
Sbjct: 740 RGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKT 799
Query: 197 YTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVS-SDMASAEG 250
YT L+ G+A+ + + K +KP ++ C LT+LL S ++ G
Sbjct: 800 YTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCL---LTSLLSRASIAEAYIYSG 856
Query: 251 ILTM---MSQAGL---EPSAQTYTKLMC 272
++T+ M +AGL +A ++K +C
Sbjct: 857 VMTICKEMVEAGLIVDMGTAVHWSKCLC 884
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 144/353 (40%), Gaps = 46/353 (13%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNA++ L + + A++ + G+ P+ +TY L++ YC+ GN++ A
Sbjct: 1228 YNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNG------YCKAGNLKEALL 1281
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ +R + +N LI G+ + D+ A + M + G P+ TYT LM G
Sbjct: 1282 LFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSL 1341
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ + + + CF++ L+ D+A A + ++ G+
Sbjct: 1342 NVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTV 1401
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIV 322
TY L+ G K G++ + L + S+ + D Y +IHA G + E I
Sbjct: 1402 TYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERG---LLREARKI- 1457
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS----IRRLLAQNGSSLVN 378
F N M GL PSA T+T ++ Y + G++ S R++L + G
Sbjct: 1458 -FNN----------MISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKML-EEGVEPNE 1505
Query: 379 GDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAY 431
Y +IHAL G + A++H + ++ +G + Y
Sbjct: 1506 ITYNVLIHALCRMGRTQL-----------------ASHHFHEMLERGLVANKY 1541
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 81/404 (20%), Positives = 150/404 (37%), Gaps = 73/404 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL----------------- 124
D+ N +LRV D ++ GIEP+ VTY L
Sbjct: 1083 DVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLL 1142
Query: 125 --------------ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
++ + +I+ + G++E A +++E MR + S +N LI G
Sbjct: 1143 KEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASSFTYNPLITGLL 1201
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+ + M G+ P+ TY ++ G + G +++ + K ++ L
Sbjct: 1202 ARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVI 1261
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
++ + ++ A + + +AGL P+ TY L+ GY + GD++ R L +
Sbjct: 1262 TYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEM 1321
Query: 291 GSS-----------LVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
G L+ G ++ +++ E+ DE M
Sbjct: 1322 GEQGCLPNVCTYTILMKGS----LNVRSLAMAREFFDE-------------------MLS 1358
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEY 396
GL+P Y +C GD+ +R +L G S Y +IH L +G+ +
Sbjct: 1359 KGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKD 1418
Query: 397 IDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
E+ K+ G D + I+ +G + A +I N +
Sbjct: 1419 AKELQMKMVSN-GLQPDCITYTCLIHAHCERGLLREARKIFNNM 1461
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 83/201 (41%), Gaps = 16/201 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L+ + + K+ S G++P+ +TY + LI +C+ G +
Sbjct: 1399 DTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITY------TCLIHAHCERGLLR 1452
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A KI M S F +I+ + + ++ SA G M + G+EP+ TY L+
Sbjct: 1453 EARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLI 1512
Query: 202 CGYAKHGDMDSIKTKIPS--LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MS 256
+ G +T++ S E L + LLI + + + E + M
Sbjct: 1513 HALCRMG-----RTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMH 1567
Query: 257 QAGLEPSAQTYTKLMCGYAKH 277
Q G+ P T+ L+ G+ H
Sbjct: 1568 QNGIHPDYLTHKALLKGFDGH 1588
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 90/219 (41%), Gaps = 25/219 (11%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+GI + VTY LI C+ GN++ A ++ M + LI+ H +
Sbjct: 1394 EGISSDTVTYNILIHG------LCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCE 1447
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSEL 226
+ A I M GL PSA T+T ++ Y + G++ S K ++P
Sbjct: 1448 RGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNE-- 1505
Query: 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+ ++ + L + + +AS M + GL + TYT L+ G K G+ + R
Sbjct: 1506 -ITYNVLIHALCRMGRTQLASHH--FHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRF 1562
Query: 287 LAQSGSSLVNGDYLDIIHALAVSGHG-------EYIDEV 318
+ + ++ DYL H + G EY+D V
Sbjct: 1563 YFEMHQNGIHPDYL--THKALLKGFDGHVHHTIEYLDNV 1599
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 7/212 (3%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E+ + +++ Y+A++ Y T L L+ +G+ PN VTY + L+ YC
Sbjct: 192 EMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTY------TLLVKGYC 245
Query: 136 QDGNIEGATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
++G +E A K++ E ++ I E + ALI G+ Q M A + M AG++ +
Sbjct: 246 KEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNM 305
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
Y ++ GY K G M ++ + + + + +S+ M A M
Sbjct: 306 FVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDM 365
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
M + G + TY L+ G+ G +D +L
Sbjct: 366 MVRNGFTGTTLTYNTLLNGFCSRGAIDDALKL 397
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 23/241 (9%)
Query: 134 YCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPS 193
YC+DG + A L+ M + ++ ++A++ G+ + A +L + GL P+
Sbjct: 174 YCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPN 233
Query: 194 AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL---CFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY K G M+ + + +K ++ + + + M A
Sbjct: 234 VVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGY--CQRGRMEDANR 291
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALA 307
+ M AG++ + Y ++ GY K G M V +LL + VN D Y ++
Sbjct: 292 VRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYC 351
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
G F+ F + MM + G + TY L+ G+ G +D +
Sbjct: 352 RKG-------------FMTKAFETCD--MMVRNGFTGTTLTYNTLLNGFCSRGAIDDALK 396
Query: 368 L 368
L
Sbjct: 397 L 397
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN+L+ + + KL+S+GI PN +TY LI +C+DGN
Sbjct: 715 NIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDG------HCKDGNTT 768
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ + M + + + LI+G M A +L M + ++P+ TY L+
Sbjct: 769 EAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLI 828
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLC 229
GYA+ G+M +I K +E+ +C
Sbjct: 829 QGYARCGNMKAIT------KLYNEMHIC 850
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 8/184 (4%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L+ +G P+ TY LI G+I+ A + + M + +N
Sbjct: 667 NLFEDLKVKGFIPDNFTYSSLIHGCS------ASGSIDLAFGLRDEMLSARLTPNIVTYN 720
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD-MDSIKTKIPSLKP 222
+LIYG ++ +++ A + + G+ P+A TY L+ G+ K G+ ++ K K +K
Sbjct: 721 SLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKE 780
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+ + F++ + + M A +L M + ++P+ TY L+ GYA+ G+M +
Sbjct: 781 GIQPTV-FTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKA 839
Query: 283 VRRL 286
+ +L
Sbjct: 840 ITKL 843
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 138/361 (38%), Gaps = 58/361 (16%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N ++ N + +++ + +TY+ LI YC+ G++ AT+I
Sbjct: 449 NTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDG------YCKLGDLGRATQI 502
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
M + F S +FN+ I G A I MS GL P+ TY L+ G+ K
Sbjct: 503 RIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCK 562
Query: 207 HGDMDSI---------KTKIPSLKPQSELFLCF----SFQLTNLLI--LVSSDM------ 245
G++ K P+L S L CF NL++ L +DM
Sbjct: 563 EGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSA 622
Query: 246 -----ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNG 297
I+ ++ + + + ++ G K G + R L L G N
Sbjct: 623 STLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNF 682
Query: 298 DYLDIIHALAVSG-----HGEYIDEVSA-----IVCFVNICFHWLEGPMMSQA------- 340
Y +IH + SG G + +SA IV + ++ + + +S+A
Sbjct: 683 TYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKL 742
Query: 341 ---GLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHG 394
G+ P+A TY L+ G+ K G+ +++ + + G Y +IH L G+
Sbjct: 743 QSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYM 802
Query: 395 E 395
E
Sbjct: 803 E 803
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 94/237 (39%), Gaps = 53/237 (22%)
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C+ G + A + E ++ K F +++LI+G S + + A G+ M A L P+
Sbjct: 657 CKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNI 716
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY L+ G K S +++ A +
Sbjct: 717 VTYNSLIYGLCK-----------------------------------SCNVSRAVSLFNK 741
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGH 311
+ G+ P+A TY L+ G+ K G+ +L + + G Y +IH L G
Sbjct: 742 LQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQG- 800
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
Y++E ++ M + ++P+ TY L+ GYA+ G+M +I +L
Sbjct: 801 --YMEEAIKLL------------DQMIENNVDPNFITYWTLIQGYARCGNMKAITKL 843
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 80/200 (40%), Gaps = 16/200 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN LL + + +G+ PN IS S L+ + + G E A
Sbjct: 378 YNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNE------ISCSTLLDGFFKAGKTEQALN 431
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + + + N +I G + M AE + M + + TY L+ GY
Sbjct: 432 LWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYC 491
Query: 206 KHGDM---DSIKTKIPSLK--PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
K GD+ I+ ++ +L P E+F F +T L I S I MS GL
Sbjct: 492 KLGDLGRATQIRIEMENLGFVPSVEMFNSF---ITGLFIAKQS--GKVNDIRVEMSAKGL 546
Query: 261 EPSAQTYTKLMCGYAKHGDM 280
P+ TY L+ G+ K G++
Sbjct: 547 SPNTVTYGALIAGWCKEGNL 566
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 98/258 (37%), Gaps = 36/258 (13%)
Query: 153 KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 212
K F S F+ L+ H+ A + A + M +AG + ++ +L+ + GD+ +
Sbjct: 88 KDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGT 147
Query: 213 IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
++ L F+ + +A A L M + GL+ + Y +M
Sbjct: 148 AVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMD 207
Query: 273 GYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAVSGHGE------------------ 313
GY + G + R+LL S V G +++ + L V G+ +
Sbjct: 208 GYCRIGQTEVARKLLH---SLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENE 264
Query: 314 --YIDEVSAIVCFVNICFHWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDM 362
IDEV+ C G M M AG++ + Y ++ GY K G M
Sbjct: 265 KIVIDEVAYGALINGYC---QRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRM 321
Query: 363 DSIRRLLAQNGSSLVNGD 380
+ +LL N VN D
Sbjct: 322 GEVEKLLQANEYRGVNLD 339
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 127/300 (42%), Gaps = 40/300 (13%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
++++ NAL+ + T L + + G+E +R+TY +I C+ +
Sbjct: 455 VNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGC------CKASKM 508
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A ++ + M + F FN ++ + + +L M GL+P TY +
Sbjct: 509 DEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTI 568
Query: 201 MCGYAKHGDMDSIKTKIP-----SLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGIL 252
+ GY K DM + L+P + ++ N LI + +++ A GIL
Sbjct: 569 IDGYCKAKDMHKANEYLTELMKNGLRPNAVIY--------NALIGGYGRNGNISDAIGIL 620
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAVSGH 311
M G++P+ TY LM G ++ V+ + AQ +V L +I + + + G
Sbjct: 621 DTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQ---CIVKDIELGVIGYTIIIQGF 677
Query: 312 GEY--IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ IDE A++ F M G+ P+ TYT LM Y+K G+ + +L
Sbjct: 678 CKIGKIDE--AVMYFKE----------MHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLF 725
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 108/246 (43%), Gaps = 22/246 (8%)
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
I + C+ G E A +I + K ++ NALI+G Q N+M A +L M +G+
Sbjct: 429 IQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGV 488
Query: 191 EPSAQTYTKLMCGYAKHGDMD-SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
E TY ++ G K MD +I+ + +K + L F+F N+ + ++ E
Sbjct: 489 ELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDL-FTF---NIFLHTYCNLGKVE 544
Query: 250 GILTMMSQA---GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD-IIHA 305
IL ++ Q GL+P TY ++ GY K DM L + + NG + +I+
Sbjct: 545 EILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTE---LMKNGLRPNAVIYN 601
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
+ G+G + AI M G++P+ TY LM G ++ +
Sbjct: 602 ALIGGYGRNGNISDAIGIL----------DTMKYNGIQPTPVTYNSLMYWMCHAGLVEEV 651
Query: 366 RRLLAQ 371
+ + AQ
Sbjct: 652 KAVFAQ 657
Score = 43.9 bits (102), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 113/297 (38%), Gaps = 39/297 (13%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISK-YCQDGNIEGAT 144
YN ++ + H ++ S+GI+ VTY LI+K C++G +E A
Sbjct: 319 YNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYN-------LIAKALCKEGEMEHAE 371
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQAND-MASAEGILTMMSQAGLEPSAQTYTKL--- 200
KIL+ M + +FN+++ H + + ++ M L+P+ T
Sbjct: 372 KILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQE 431
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQ 257
+C KH + I ++ L + +N LI ++M A +L M
Sbjct: 432 LCKSGKHEEAAEIWFQVLGKG------LGVNVATSNALIHGLCQGNNMKEATKVLKAMVN 485
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEY 314
+G+E TY ++ G K MD +L + + G + +H G E
Sbjct: 486 SGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEE 545
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
I H L+ M GL+P TY ++ GY K DM L +
Sbjct: 546 I-------------LHLLD--QMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTE 587
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 124/330 (37%), Gaps = 36/330 (10%)
Query: 68 DPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
D FS G +P D+ Y++L+ +F ++E +GI + TY LI
Sbjct: 1106 DMFSEMIGAGILP-DVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHG 1164
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
+ G + T L M D+ F F LI G + + A+ IL +M
Sbjct: 1165 ------LSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRH 1218
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSD 244
G EP TY LM G G ++ SL + FS+ N+LI
Sbjct: 1219 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY---NILINGYCKDQK 1275
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLD 301
+ A M GL+PS TY L+ + G + + ++L + G L Y
Sbjct: 1276 IDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 1335
Query: 302 IIHALAVSGH-GEYIDEVSAI-------------VCFVNICFH------WLEGPMMSQAG 341
++ L +GH E +D +I + +C W + +S+ G
Sbjct: 1336 LLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 1395
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
LEP Y L+ G G + +LL Q
Sbjct: 1396 LEPDTIAYNILINGLCNKGMLSEAVKLLWQ 1425
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 121/330 (36%), Gaps = 62/330 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y ++ + T D +++ GI P+ V Y S L+ C+ G ++
Sbjct: 1084 DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVY------SSLMDGLCRFGRLK 1137
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M + +N+LI+G S+A L +M G P A T+T L+
Sbjct: 1138 EALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILI 1197
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K G + A+ IL +M G E
Sbjct: 1198 DGLCKEG-----------------------------------KVGEAQQILELMRHKGKE 1222
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P TY LM G G ++ +L LA G L Y +I+ + IDE
Sbjct: 1223 PDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYC---KDQKIDEA 1279
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGSS 375
F + E M GL+PS TY L+ + G + + ++L + G
Sbjct: 1280 ----------FRFFEE--MRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQF 1327
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
L Y ++ L +GH E ++ I+
Sbjct: 1328 LKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/223 (18%), Positives = 86/223 (38%), Gaps = 29/223 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI------------- 125
+ L++ YN L+ Y ++ F ++ +G++P+ VTY LI
Sbjct: 1256 IKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQ 1315
Query: 126 ----------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
+ L+ C++G++E A + + ++ + VF+ L+ G
Sbjct: 1316 KLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGM 1375
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC 229
+A + A +S+ GLEP Y L+ G G + + ++ + L
Sbjct: 1376 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDS 1435
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMC 272
+F + +L +++ A +L M P + L+C
Sbjct: 1436 ITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLC 1478
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 144/396 (36%), Gaps = 60/396 (15%)
Query: 54 CSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQG 113
CSEP +PC D F+ H L + +Y+ + +Y K+ G
Sbjct: 939 CSEP------MPCTDTFN-HL--LASVAKLGYYSTVFPMY-------------RKINDVG 976
Query: 114 IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
I+P+ T LI C + + + F L+ G N
Sbjct: 977 IQPDLYTLNILIHCC------CSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMEN 1030
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ 233
+ A + M++ GL A+TY L+ G K + KT + + C
Sbjct: 1031 GIPDAVQLFDEMTKKGLLGDAKTYGILINGLCK-----ARKTGLAIKLHEKMKGNCKGDV 1085
Query: 234 LTNLLIL--VSSDMASAEGI--LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
T +I+ + D + E + + M AG+ P Y+ LM G + G + +
Sbjct: 1086 FTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKE 1145
Query: 290 SGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
++ D Y +IH L+ +G + + F+N +M G P A
Sbjct: 1146 MEGRGISADVYTYNSLIHGLSRAGLWK------EVTWFLN---------LMVDRGFSPDA 1190
Query: 347 QTYTKL---MCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISK 403
T+T L +C K G+ I L+ G Y +++ L + G E ++
Sbjct: 1191 FTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFES 1250
Query: 404 I-QPGVGYSADAANHIYHLINKGQ-IDAAYRIVNTL 437
+ G+ + + N + + K Q ID A+R +
Sbjct: 1251 LADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEM 1286
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 69.7 bits (169), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 138/365 (37%), Gaps = 43/365 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YNA++ + DF ++E +GI PN VTY L++ C
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG------LCNSSRWS 242
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M K + ++AL+ + + A+ + M + ++P TY+ L+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLV 302
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G H +D + + L S+ + + + MSQ GL
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY---- 314
+ TY L+ G+ + GD+D + +Q ++ D Y ++ L +G E
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 315 ----------IDEVSAIVCFVNICFH------WLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+D V+ +C W +S GL+P TYT +M G
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 359 HGDMDSIRRL--------LAQNGSSLVNGDYL---DIIHALAVSGHGEYIDEIISKIQPG 407
G + + L L +N +L +GD ++I + G Y ++ I+ G
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCG---YAPSLLKDIKSG 539
Query: 408 VGYSA 412
V A
Sbjct: 540 VCKKA 544
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 119/310 (38%), Gaps = 58/310 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ +N ++ + L K+ G EP+RVT L++ +C+ +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNG------FCRRNRVS 172
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL- 200
A +++ M + + +NA+I + + A + + G+ P+ TYT L
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 201 --MCGYAKHGDM-----DSIKTKI-PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+C ++ D D IK KI P++ S L F + + + A+ +
Sbjct: 233 NGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF---------VKNGKVLEAKELF 283
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR---LLAQSG--------SSLVNGDYLD 301
M + ++P TY+ L+ G H +D + L+ G ++L+NG
Sbjct: 284 EEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING---- 339
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
A V + E MSQ GL + TY L+ G+ + GD
Sbjct: 340 FCKAKRVEDGMKLFRE-------------------MSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 362 MDSIRRLLAQ 371
+D + +Q
Sbjct: 381 VDKAQEFFSQ 390
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 143/352 (40%), Gaps = 50/352 (14%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAK-LESQGIEPNRVTYQQLISNSKLI 131
G+ L + N LL L E+ F +F+ K + + I PN +T+ +I+
Sbjct: 185 RAGDYRYKLSVLSCNPLLSA-LVKENEFGGVEFVYKEMIRRKISPNLITFNTVING---- 239
Query: 132 SKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ---ANDMASAEGILTMMSQA 188
C+ G + A +++ M+ F + +N LI G+ + M A+ IL M +
Sbjct: 240 --LCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVEN 297
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
+ P++ T+ L+ G+ K ++ + + + LKP + L N
Sbjct: 298 KVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCN-----EG 352
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL--- 300
+ A+ +L M + L+P+ TY L+ GY K ++ R L G + + +
Sbjct: 353 KLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFN 412
Query: 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
++H G E +L +M + G P+A TY L+ G+ + G
Sbjct: 413 TLLHGYCKFGKMEE---------------AFLLQKVMLEKGFLPNASTYNCLIVGFCREG 457
Query: 361 DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGE---------YIDEIISK 403
M+ ++ LL + V D + + + +S E IDE++ K
Sbjct: 458 KMEEVKNLLNEMQCRGVKAD--TVTYNILISAWCEKKEPKKAARLIDEMLDK 507
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 140/376 (37%), Gaps = 77/376 (20%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK---ILEFMRDKTFPISEG 160
D + ++ G PN VTY LI YC+ G + K IL+ M + +
Sbjct: 251 DVVDDMKVWGFWPNVVTYNTLIDG------YCKMGRVGKMYKADAILKEMVENKVSPNSV 304
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI--- 217
FN LI G + ++++A + M GL+P+ TY L+ G G ++ K +
Sbjct: 305 TFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEM 364
Query: 218 --PSLKPQ--------------------SELFLCFSFQ-LTNLLILVSS---------DM 245
+LKP ELF Q LT +I ++ M
Sbjct: 365 LSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKM 424
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHA 305
A + +M + G P+A TY L+ G+ + G M+ V+ LL + V D + +
Sbjct: 425 EEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKAD--TVTYN 482
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS- 364
+ +S E + A M GL+PS TY L+ GY G++ +
Sbjct: 483 ILISAWCEKKEPKKAARLI----------DEMLDKGLKPSHLTYNILLNGYCMEGNLRAA 532
Query: 365 --IRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYID------------------EIISKI 404
+R+ + + G Y +I G E + EII +
Sbjct: 533 LNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEE 592
Query: 405 QPGVGYSADAANHIYH 420
G+ D H+YH
Sbjct: 593 MMEKGFLPDIEGHLYH 608
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 100/233 (42%), Gaps = 29/233 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI-------------------- 125
+N L+ + +E+ + +++SQG++P VTY L+
Sbjct: 306 FNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEML 365
Query: 126 -SNSK--------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
SN K LI+ YC+ +E A ++ + + + + FN L++G+ + M
Sbjct: 366 SSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKME 425
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236
A + +M + G P+A TY L+ G+ + G M+ +K + ++ + ++ +
Sbjct: 426 EAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILI 485
Query: 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ A ++ M GL+PS TY L+ GY G++ + L Q
Sbjct: 486 SAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQ 538
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 129/309 (41%), Gaps = 25/309 (8%)
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G +E K E +R K P + FN +I G + + A ++ M G P+ TY
Sbjct: 212 GGVEFVYK--EMIRRKISP-NLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTY 268
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTM 254
L+ GY K G + + LK E + + N+LI ++++A +
Sbjct: 269 NTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEE 328
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
M GL+P+ TY L+ G G ++ + LL + SS + + I + ++G+ +
Sbjct: 329 MQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNV--ITYNALINGYCKK 386
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQ 371
A F NI + GL P+ T+ L+ GY K G M+ +++++ +
Sbjct: 387 KLLEEARELFDNI----------GKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLE 436
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQID 428
G Y +I G E + +++++Q G AD + I K +
Sbjct: 437 KGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCR-GVKADTVTYNILISAWCEKKEPK 495
Query: 429 AAYRIVNTL 437
A R+++ +
Sbjct: 496 KAARLIDEM 504
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 20/215 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YNAL+ Y + + + QG+ PN +T+ L+ YC+ G +E
Sbjct: 372 NVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHG------YCKFGKME 425
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M +K F + +N LI G + M + +L M G++ TY L+
Sbjct: 426 EAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILI 485
Query: 202 CGYAKHGD-------MDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
+ + + +D + K LKP L ++ L + ++ +A +
Sbjct: 486 SAWCEKKEPKKAARLIDEMLDK--GLKPSH---LTYNILLNGYCM--EGNLRAALNLRKQ 538
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
M + G + TY L+ GY + G ++ LL +
Sbjct: 539 MEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNE 573
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V D YN L+ + + + + ++ +G++P+ +TY L++ YC +G
Sbjct: 474 VKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNG------YCMEG 527
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
N+ A + + M + + +N LI G+ + + A G+L M + GL P+ TY
Sbjct: 528 NLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTY 586
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 171/425 (40%), Gaps = 57/425 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP ++ Y LL + T + +++ G +PN +TY LI + + G
Sbjct: 120 VP-NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQH------LSRAG 172
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
I+ A +++ R P ++ G +A+ + A + M Q G+ P+ TY+
Sbjct: 173 EIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYS 232
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD-MASAEGILTMMSQ 257
L+ G+ +HG++D + K + L + L L + + A + + Q
Sbjct: 233 NLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQ 292
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY 314
+G+ P TY+ L+ +A+ G D+ LL + V D Y +I+ L ++
Sbjct: 293 SGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLC--KERKF 350
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGS 374
D F LE +M AG P+ TY +M G K G MD + R+
Sbjct: 351 QD-----------AFRLLE--LMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLK 397
Query: 375 SLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLIN---KGQID 428
S + D Y I++ L+ +G D+A ++ LI +G
Sbjct: 398 SRCSPDVVTYSIIMNGLSKAGM------------------LDSAVKLFELIKSSREGPDA 439
Query: 429 AAYR-IVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDA 487
AAY ++ +L R+ + + G + H ++ G A + L + + D+
Sbjct: 440 AAYSMVITSLCRAGKL---EEACGMY---HGMEVTVAGDNICRALAGLVAALCDAERTDS 493
Query: 488 AYRIV 492
A RIV
Sbjct: 494 ARRIV 498
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 100/238 (42%), Gaps = 32/238 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D+ Y+ L+ + + + L + G++P+ VTY S LI+ C++
Sbjct: 296 VP-DVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTY------STLINVLCKER 348
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A ++LE M P + +N+++ G ++ M + MM ++ P TY+
Sbjct: 349 KFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYS 408
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
+M G +K G +DS +K E D A+ ++T + +A
Sbjct: 409 IIMNGLSKAGMLDSAVKLFELIKSSRE----------------GPDAAAYSMVITSLCRA 452
Query: 259 G-LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD----IIHALAVSGH 311
G LE + Y + A D++ R LA ++L + + D I+ + GH
Sbjct: 453 GKLEEACGMYHGMEVTVAG----DNICRALAGLVAALCDAERTDSARRIVEVASERGH 506
>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
Length = 1095
Score = 69.7 bits (169), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 124/317 (39%), Gaps = 64/317 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN +L Y+ S L +E GIE + TY + +I K C+ A
Sbjct: 267 YNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTY------NIMIDKLCKLKRSARAYL 320
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ MR+ E +N LI+G + A I M + L+PS TYT L+ GY
Sbjct: 321 LLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYC 380
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
++G D A +L M G+ PS
Sbjct: 381 RNGRTD-----------------------------------EARRVLYEMQITGVRPSEL 405
Query: 266 TYTKLMCGYAKHGD----MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
TY+ L+ GY KH +D ++ L ++S S +N ++ + + G + + EVS
Sbjct: 406 TYSALLNGYCKHSKLGPALDLIKYLRSRSIS--IN----RTMYTILIDGFCQ-LGEVSKA 458
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV---N 378
+ M G++P TY+ L+ G K G + + +L++ S V N
Sbjct: 459 KQILKC---------MLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNN 509
Query: 379 GDYLDIIHALAVSGHGE 395
Y ++ +GH +
Sbjct: 510 VLYTTLVFYFCKAGHAK 526
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 108/574 (18%), Positives = 223/574 (38%), Gaps = 99/574 (17%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
++ Y AL+ Y N T L +++ G+ P+ +TY S L++ YC+ +
Sbjct: 369 VATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTY------SALLNGYCKHSKLGP 422
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A +++++R ++ I+ ++ LI G Q +++ A+ IL M G++P TY+ L+
Sbjct: 423 ALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALIN 482
Query: 203 GYAKHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
G K G + K + ++ P + L+ F + A + +
Sbjct: 483 GMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCK-----AGHAKEALKYFVDIYR 537
Query: 258 AGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
+GL ++ + L+C + + G + + ++ +++ S + II + G
Sbjct: 538 SGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRG---- 593
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ--N 372
+ + A + N+ H G P TY L+ G + G + + +
Sbjct: 594 -NVLEAFSVYDNMVRH----------GWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLE 642
Query: 373 GSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLI-----NKGQI 427
+ ++ L+ + + + HG +DE + + V + + Y ++ +G++
Sbjct: 643 KACAIDEKTLNTL-LVGICKHGT-LDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKV 700
Query: 428 DAAYRIV----------NTLARSANING----EQLPVGGFLVRHMVKTNQPGVGYSADAA 473
A ++ +T+A + +NG Q+ ++ + ++ + G+ A
Sbjct: 701 VPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEII--CKEGLYADCIAY 758
Query: 474 NHIYH-LINKGQIDAAYRIVNTL--------ARSAN------INGEQLPVGGFLVRHMVK 518
N + + + GQI+ R++ + + S N I QL +L R MVK
Sbjct: 759 NSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVK 818
Query: 519 TNQPIDKV------LAVC------------HRLTDENLHPRAFNLAVLIKAHVLKEDYTG 560
D V +C ++ E + P +LIKA K +
Sbjct: 819 EGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSN 878
Query: 561 AVETFEYCVNQFRATPWKGELLKRFIQAEDAACL 594
A++ F Y W G++ F ED L
Sbjct: 879 ALQLFSY-------MKWVGDIDGAFELKEDMKAL 905
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 90/231 (38%), Gaps = 27/231 (11%)
Query: 68 DPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
+ F + + + D++ +N ++ Y + + G P+ TY L+
Sbjct: 564 EQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRG 623
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
CQ G++ A + + ++ +K I E N L+ G + + A + M
Sbjct: 624 ------LCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT 677
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS-----------LKPQSELFLCFSFQLTN 236
+ P TYT L+ G+ K G + +P+ L P + + C L N
Sbjct: 678 RNILPDTYTYTILLDGFCKRGKV------VPALILLQMMLEKGLVPDTIAYTC----LLN 727
Query: 237 LLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
L+ A++ ++ + GL Y +M GY K G ++ + RL+
Sbjct: 728 GLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLM 778
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 95/283 (33%), Gaps = 89/283 (31%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
PLD++ N +L L K+++ + PN VTY + +++ Y + G
Sbjct: 227 PLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTY------NTILNWYVKKGR 279
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A +IL+ M +N +I + A A +L M + L P +Y
Sbjct: 280 CKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNT 339
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L+ G+ G + NL I I M +
Sbjct: 340 LIHGFFGEGKI-------------------------NLAIY----------IFNQMLRQS 364
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
L+PS TYT L+ GY ++G D RR+L +
Sbjct: 365 LKPSVATYTALIDGYCRNGRTDEARRVLYE------------------------------ 394
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
M G+ PS TY+ L+ GY KH +
Sbjct: 395 -----------------MQITGVRPSELTYSALLNGYCKHSKL 420
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 105 FLAKLESQGIEPNRVTYQQLI---------SNS-KLISKYCQDGNIEGATKILEFMRDKT 154
FL K+ +G+ P+ + + LI SN+ +L S G+I+GA ++ E M+
Sbjct: 847 FLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALG 906
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
SE ++++ G + + A + + + +AG+ P+ T+T LM G K +D
Sbjct: 907 VVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAF 966
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + S + ++ + ++ +T L + A + M GL P+ TY L
Sbjct: 967 HLKQLMESCGLKVDV-VTYNVLITGL--CNKKCICDALDLYEEMKSKGLLPNITTYITLT 1023
Query: 272 CGYAKHGDMDSVRRLL 287
G M +LL
Sbjct: 1024 GAMYATGTMQDGEKLL 1039
>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
Length = 953
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 141/353 (39%), Gaps = 33/353 (9%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
GN+P E ++ D YN + FL ++ + G+EP++ TY
Sbjct: 553 GNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATY 612
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
+IS C++GN A K+L M+ + + + L+ G +A + A+ +
Sbjct: 613 NTMISAQ------CREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYL 666
Query: 182 LTMMSQAGLEPSAQTYTKLM--CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI 239
L M+ AG P+ TY +++ C ++ + ++ L + L + T + +
Sbjct: 667 LNEMASAGFTPTPLTYRRVLQACSGSRS---PYVILEVHELMMGAGLHADITVYNTLVHV 723
Query: 240 LVSSDMA-SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLV 295
L M A +L M G+ P T+ L+ G+ K +D+ AQ G S
Sbjct: 724 LCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPN 783
Query: 296 NGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCG 355
+ ++ L +G I E ++C M + GLEP+ TY L+ G
Sbjct: 784 IATFNTLLGGLESAGR---IGEADTVIC------------EMKKMGLEPNNLTYDILVTG 828
Query: 356 YAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
YAK + RL + G Y +I A +G E+ S+++
Sbjct: 829 YAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMK 881
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 113/290 (38%), Gaps = 57/290 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI+ YN L+ V + T T L ++ +GI P+ +T+ LI +C+ +++
Sbjct: 713 DITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILG------HCKSSHLD 766
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A M + + FN L+ G A + A+ ++ M + GLEP+ TY L+
Sbjct: 767 NAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILV 826
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYAK + K+ +L+ E M G
Sbjct: 827 TGYAKKSN------KVEALRLYCE-----------------------------MVSKGFI 851
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV--NGDYLDIIHALAVSGHGEYIDEVS 319
P A TY L+ +AK G M+ + L ++ V DI+ ++G + +
Sbjct: 852 PKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDIL----LNGWSKLRNGTE 907
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ + M + G +PS T + + ++K G RRLL
Sbjct: 908 VRILLKD----------MKELGFKPSKGTISSMSRAFSKPGMTWEARRLL 947
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 122/300 (40%), Gaps = 32/300 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V +D+ Y ++ D L S I PN VTY + L+ +C+ G
Sbjct: 360 VAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTY------TVLVDAHCRAG 413
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
NI+GA ++L M +K+ + F++++ G + +A A G + M +G+ P+ TY
Sbjct: 414 NIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYG 473
Query: 199 KLMCGYAK-HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
L+ G+ K G ++ L E L N L + ++ AE + M +
Sbjct: 474 TLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGL-RKNGNIEEAEALFKDMGE 532
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ------SGSSLVNGDYLDIIHALAVSGH 311
GL Y LM G K G+M + ++ + S ++V +++ + L
Sbjct: 533 RGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRL----- 587
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
G++ + S + M GLEP TY ++ + G+ +LL +
Sbjct: 588 GKFSEAKSFL-------------KEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNE 634
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 95/241 (39%), Gaps = 32/241 (13%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
GN+ + + E V ++ ++++L + ++ K++ GI PN VTY
Sbjct: 413 GNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTY 472
Query: 122 QQLISNSKLISKYCQDG--NIEGATKILEFMRDKTFPISEGV------FNALIYGHSQAN 173
LI DG +G L+ RD + EGV ++L+ G +
Sbjct: 473 GTLI-----------DGFFKCQGQEAALDVYRDM---LHEGVEANNFIVDSLVNGLRKNG 518
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFL 228
++ AE + M + GL Y LM G K G+M + + +L P + ++
Sbjct: 519 NIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYN 578
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
F L L + A+ L M GLEP TY ++ + G+ +LL
Sbjct: 579 VFINCLCRL-----GKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLN 633
Query: 289 Q 289
+
Sbjct: 634 E 634
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 113/284 (39%), Gaps = 30/284 (10%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD+ YN L+ + + + + ++++ G+EP+ VT+ + LI +YC+ I
Sbjct: 222 LDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTH------TTLIGEYCKMKRI 275
Query: 141 EGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
E A + E M R P +AL+ G + + A + M + G+ P+ TY
Sbjct: 276 EEAFTLYEGMVRSGVLP-DVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCT 334
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
+ AK ++ + + + + + + A+ +L
Sbjct: 335 FIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDN 394
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYID 316
+ P+ TYT L+ + + G++D ++L Q V+ + + I++ L G
Sbjct: 395 ITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRG------ 448
Query: 317 EVSAIVCFVNICFHWLEGPM--MSQAGLEPSAQTYTKLMCGYAK 358
C G M M +G+ P+ TY L+ G+ K
Sbjct: 449 -----------CIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFK 481
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 94/242 (38%), Gaps = 12/242 (4%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI YC+ ++ A ++E M + + +N L+ G + D +A + M G
Sbjct: 195 LIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADG 254
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+EPS T+T L+ Y K ++ T + L + + + A
Sbjct: 255 VEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAY 314
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+ M + G+ P+ TY + AK ++ LL + S V D + +
Sbjct: 315 ALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRL 374
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G I+E ++ H L + P+ TYT L+ + + G++D ++L
Sbjct: 375 GKEGKIEEAK------DVLRHALSD------NITPNCVTYTVLVDAHCRAGNIDGAEQML 422
Query: 370 AQ 371
Q
Sbjct: 423 LQ 424
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 133/342 (38%), Gaps = 42/342 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y+AL+ Y+ F + ++ +GI PN +TY +I +C+ ++
Sbjct: 318 NVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDG------FCKQNRLD 371
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M K FN LI G+ A + +L M++ GL TY L+
Sbjct: 372 AAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLI 431
Query: 202 CGYAKHGDMDS--------IKTKI-PSLKPQSELF--LCFSFQLTNLLILVSSDMASAEG 250
G+ GD+++ I + + P + + L LC + +L + L + + S
Sbjct: 432 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 491
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
+ G+EP QTY L+ G G + + + + + G Y +I+ L
Sbjct: 492 LDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLC 551
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
+DE + + M P T+ L+ GY K G +D
Sbjct: 552 KQSR---LDEATQMF------------DSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLE 596
Query: 368 LLAQNGSSLVNGD---YLDIIHALA----VSGHGEYIDEIIS 402
L + G + D Y+ +IH ++G + E+IS
Sbjct: 597 LFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMIS 638
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 118/286 (41%), Gaps = 29/286 (10%)
Query: 86 YNALLR-VYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
Y+A++ ++ D H+ + +++ +GI P+ TY +I +C G A
Sbjct: 252 YSAIIDGLWKDGRHS-DAHNLYTEMQEKGIFPDLFTYNCMIDG------FCSSGRWSEAQ 304
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
++L+ M ++ + ++ALI + + AE + M G+ P+ TY ++ G+
Sbjct: 305 RLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGF 364
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLE 261
K +D+ + + + F+F N LI + + +L M++ GL
Sbjct: 365 CKQNRLDAAEHMFYVMATKGCSPDVFTF---NTLIDGYCGAKRIDDGTELLHEMTETGLV 421
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVSA 320
TY L+ G+ GD+++ L Q SS V D + L + +G+ D +
Sbjct: 422 ADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 481
Query: 321 IVCFVNICFHWLEGPMMSQ------AGLEPSAQTYTKLMCGYAKHG 360
F ++ M G+EP QTY L+ G G
Sbjct: 482 --------FKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEG 519
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 118/306 (38%), Gaps = 36/306 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P D+ +N L++ + K+ G +P+ VT+ S L+ C +
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTF------STLLHGLCVED 161
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A + M F L+ G + + A +L M + GL+P+ TY
Sbjct: 162 RVSEALDLFHQMCRPNVV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 217
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSEL---FLCFSFQLTNLLILVSSDMASAEGILTMM 255
++ G K GD S + ++ S + + +S + L + A + T M
Sbjct: 218 TIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGL--WKDGRHSDAHNLYTEM 275
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHG 312
+ G+ P TY ++ G+ G +RLL + +N + Y +I+A
Sbjct: 276 QEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINA------- 328
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---L 369
Y+ E L M+ + G+ P+ TY ++ G+ K +D+ + +
Sbjct: 329 -YVKERKFFEA------EELYDEMLPR-GIIPNTITYNSMIDGFCKQNRLDAAEHMFYVM 380
Query: 370 AQNGSS 375
A G S
Sbjct: 381 ATKGCS 386
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 133/307 (43%), Gaps = 47/307 (15%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q +++ S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKSVMQASGVQPDVY-THSVLINGL--CKESKMDDANELFDEMLBNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSV----RRLLAQS-GSSLVNGDYLDIIHALAVSGH----GEYIDEVSAIV 322
G+ K+G +D R++L+QS L+ Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYRQMLSQSLLPDLIT--YNTLIYGLCKKGDLKQXXDLIDE----- 301
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNG 379
MS GL+P TYT L+ G K GD+++ R+ + + L +
Sbjct: 302 --------------MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDX 347
Query: 380 DYLDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIV 434
Y +I L G + + E++S ++P +G N KG + +++
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLL 404
Query: 435 NTLARSA 441
+ R
Sbjct: 405 KEMQRXG 411
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 12/189 (6%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ ++ G+ PN VT+ + LI +C++G ++ A +I M ++ +N
Sbjct: 227 ELFDEMLBNGLVPNGVTF------TTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYN 280
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-IKTKIPSLKP 222
LIYG + D+ ++ MS GL+P TYT L+ G K GD+++ + + +K
Sbjct: 281 TLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Query: 223 QSELFLCFSFQLTNLLILVSSDMAS--AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
L T L+ + + S AE +L M GL+P TYT ++ + K GD+
Sbjct: 341 NIRL---DDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDV 397
Query: 281 DSVRRLLAQ 289
+ +LL +
Sbjct: 398 WTGSKLLKE 406
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 118/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ + LI G + + M A + M GL P+
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS L ++ + D+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g04810, chloroplastic; AltName: Full=Maize PPR4
homolog; Short=AtPPR4; Flags: Precursor
gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
thaliana]
gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 952
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 101/236 (42%), Gaps = 26/236 (11%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G++ + ++ + MR + FN LI G + M A IL M+ AG
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+ + TYTK+M GYA GD L+ + F+++ S M SA
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
+ MS + ++ Y L+ G+A+ GD+ L+ Q V D Y I A
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISAC 774
Query: 307 AVSGH----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+ +G + I+E+ A+ G++P+ +TYT L+ G+A+
Sbjct: 775 SKAGDMNRATQTIEEMEAL-------------------GVKPNIKTYTTLIKGWAR 811
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 81/191 (42%), Gaps = 41/191 (21%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +++ Y T ++ +L+++G++ + TY+ L+ C+ G ++ A
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKAC------CKSGRMQSALA 715
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + P + V+N LI G ++ D+ A ++ M + G++P TYT + +
Sbjct: 716 VTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACS 775
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K GDM+ A + M G++P+ +
Sbjct: 776 KAGDMN-----------------------------------RATQTIEEMEALGVKPNIK 800
Query: 266 TYTKLMCGYAK 276
TYT L+ G+A+
Sbjct: 801 TYTTLIKGWAR 811
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 143/369 (38%), Gaps = 55/369 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +L+ Y + K++ +GIE + VTY S ++ + + G+ E A
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTY------SVIVGGFSKAGHAEAADY 400
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + ++ ++ +IY H Q +M AE ++ M + G++ Y +M GY
Sbjct: 401 WFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYT 460
Query: 206 -----KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
K G + + K P + C L NL V ++ A + +M + G+
Sbjct: 461 MVADEKKGLVVFKRLKECGFTPTVVTYGC----LINLYTKVGK-ISKALEVSRVMKEEGV 515
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
+ + +TY+ ++ G+ K D + + + D Y +II A G+ +D
Sbjct: 516 KHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN---MDR 572
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM-------DSIRRLLA 370
V M + P+ +T+ ++ GYAK GDM D +RR
Sbjct: 573 AIQTV------------KEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620
Query: 371 QNGSSLVNGDYLDIIHALAVSGHGEYIDEII-----------SKIQPG---VGYSADAAN 416
NG ++ + E +DE+ +KI G VG + A
Sbjct: 621 VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 680
Query: 417 HIYHLINKG 425
+ L N+G
Sbjct: 681 YFTRLQNEG 689
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 106/263 (40%), Gaps = 30/263 (11%)
Query: 114 IEPNRVTYQQLISNSKLISK------------YCQDGNIEGATKILEFMRDKTFPISEGV 161
++ N +Q +IS + ISK Y + G++ A + E MR + + +
Sbjct: 287 LDTNGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRI 346
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+ +LI+ ++ DM A + M + G+E S TY+ ++ G++K G ++ K
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 406
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
+ + + +M AE ++ M + G++ Y +M GY D
Sbjct: 407 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 466
Query: 282 S---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
V + L + G + Y +I+ G EVS + M
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRV---------------MK 511
Query: 339 QAGLEPSAQTYTKLMCGYAKHGD 361
+ G++ + +TY+ ++ G+ K D
Sbjct: 512 EEGVKHNLKTYSMMINGFVKLKD 534
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
LDV DI Y ALL+ + S ++ ++ I N Y LI + +
Sbjct: 690 LDV--DIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDG------WAR 741
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G++ A +++ M+ + + + I S+A DM A + M G++P+ +T
Sbjct: 742 RGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKT 801
Query: 197 YTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVS-SDMASAEG 250
YT L+ G+A+ + + K +KP ++ C LT+LL S ++ G
Sbjct: 802 YTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCL---LTSLLSRASIAEAYIYSG 858
Query: 251 ILTM---MSQAGL---EPSAQTYTKLMC 272
++T+ M +AGL +A ++K +C
Sbjct: 859 VMTICKEMVEAGLIVDMGTAVHWSKCLC 886
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 109/258 (42%), Gaps = 18/258 (6%)
Query: 114 IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
+ PNR+TY LI YC+ G +E A I E M+ + + FN+L+ G +A
Sbjct: 248 VAPNRITYNTLIDG------YCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQ 301
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ 233
M A+ +L M G P TYT L G+ K G++D+ T + L ++
Sbjct: 302 MMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCS 361
Query: 234 LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293
+ + +M AE +L + GL P + ++ GY + GD++ + + +
Sbjct: 362 ILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAV 421
Query: 294 LVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
+ ++ + + V E + A C M + G+ P+ +TY L+
Sbjct: 422 GLRPNH--VTYNSLVKKFCEMKNMEEAEKCI----------KKMVEKGVLPNVETYNTLI 469
Query: 354 CGYAKHGDMDSIRRLLAQ 371
GY + D ++L +
Sbjct: 470 DGYGRSCLFDRCFQILEE 487
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 115/287 (40%), Gaps = 43/287 (14%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L K G+ P V + +++ YCQ G+I A +E M + +N
Sbjct: 378 EVLKKFLENGLAPVGVFFNTIVNG------YCQVGDINKAYTTIEKMEAVGLRPNHVTYN 431
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIP 218
+L+ + +M AE + M + G+ P+ +TY L+ GY + D + +
Sbjct: 432 SLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKK 491
Query: 219 SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
LKP + C L N L +++ AE IL M G+ P+AQ Y L+ G G
Sbjct: 492 GLKPNVISYGC----LINCLC-KDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAG 546
Query: 279 DMDSVRRLLAQSGS-----SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICF---- 329
+ R + + +LV Y +I+ L G + +++ + + F
Sbjct: 547 KLKDAFRFFDEMVAREIVPTLVT--YNILINGLCKKGKVMEAENLASEITRKGLSFDVIT 604
Query: 330 --HWLEG--------------PMMSQAGLEPSAQTYTKLMCGYAKHG 360
+ G M ++G++P+ TY +L+ G K G
Sbjct: 605 YNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEG 651
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F ++ ++ I P VTY LI+ C+ G + A + + K +N+
Sbjct: 554 FFDEMVAREIVPTLVTYNILING------LCKKGKVMEAENLASEITRKGLSFDVITYNS 607
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
LI G+S A ++ A + M ++G++P+ TY +L+ G K G + + KI +
Sbjct: 608 LISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLV--LVEKI--YQEML 663
Query: 225 ELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
++ L + N LI + D+ A + + M G++P TY L+ G+ K G M
Sbjct: 664 QMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMH 723
Query: 282 SVRRLL 287
V+ L+
Sbjct: 724 KVKNLV 729
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 23/208 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ D+ YN+L+ Y + + ++ GI+P TY +LI+ C
Sbjct: 598 LSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-------CGKE 650
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ KI + M ++NALI+ + + D+ A + + M G++P TY
Sbjct: 651 GLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYN 710
Query: 199 KLMCGYAKHGDMDSIKT-----KIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
L+ G+ K G M +K KI L P++E + ++LI+ + +G
Sbjct: 711 CLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETY--------DILIVGHCKLKDFDGAYV 762
Query: 254 M---MSQAGLEPSAQTYTKLMCGYAKHG 278
M + G PS L+ G + G
Sbjct: 763 WYREMFENGFTPSVSICDNLITGLREEG 790
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 122/292 (41%), Gaps = 38/292 (13%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
++ N L + + +++ G+ P++ Y K I + G+++
Sbjct: 147 VASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMY------GKAIQAAVKLGDLKR 200
Query: 143 ATKILEFMRDKTFPISEGVF--NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A +++ M K +S GVF N +I G + M AE + M + P+ TY L
Sbjct: 201 AIELMTCM--KRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTL 258
Query: 201 MCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
+ GY K G ++ + K+ +++P + F+ L L + M A+ +L M
Sbjct: 259 IDGYCKVGQLEEAFNIRERMKVENVEPT---IITFNSLLNGL--CRAQMMEEAQRVLEEM 313
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHG 312
G P TYT L G+ K G++D+ L + G +++ +++AL G+
Sbjct: 314 EVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNM 373
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
E +EV +LE GL P + ++ GY + GD++
Sbjct: 374 EKAEEVLK---------KFLEN------GLAPVGVFFNTIVNGYCQVGDINK 410
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 122/318 (38%), Gaps = 52/318 (16%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL--------------------- 124
YN+L++ + + ++ + K+ +G+ PN TY L
Sbjct: 430 YNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEME 489
Query: 125 --------ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
IS LI+ C+D NI A IL M + + ++N LI G A +
Sbjct: 490 KKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLK 549
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN 236
A M + P+ TY L+ G K G + + + + L F N
Sbjct: 550 DAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKG---LSFDVITYN 606
Query: 237 LLILVSSDMASAEGILTM---MSQAGLEPSAQTYTKLMCGYAKHG--DMDSVRRLLAQSG 291
LI S + + L + M ++G++P+ TY +L+ G K G ++ + + + Q
Sbjct: 607 SLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMN 666
Query: 292 SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
Y +IH HG+ S L M +Q G++P TY
Sbjct: 667 LVPDRVIYNALIHCYV--EHGDVQKACS------------LHSAMEAQ-GIQPDKMTYNC 711
Query: 352 LMCGYAKHGDMDSIRRLL 369
L+ G+ K G M ++ L+
Sbjct: 712 LILGHFKEGRMHKVKNLV 729
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 87/212 (41%), Gaps = 16/212 (7%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I +N+LL + L ++E G P+R TY + L + + GN++
Sbjct: 287 IITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTY------TTLFDGHLKCGNVDA 340
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
+ + E K I + + L+ + +M AE +L + GL P + ++
Sbjct: 341 SITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVN 400
Query: 203 GYAKHGDMDSIKTKIPS-----LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
GY + GD++ T I L+P + + + +M AE + M +
Sbjct: 401 GYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEM-----KNMEEAEKCIKKMVE 455
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
G+ P+ +TY L+ GY + D ++L +
Sbjct: 456 KGVLPNVETYNTLIDGYGRSCLFDRCFQILEE 487
>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
Length = 831
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 153/368 (41%), Gaps = 50/368 (13%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ +H S ++K+E G++P+ + + +I+ S + GN++ A K
Sbjct: 357 YTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS------ESGNLDQAMK 410
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM-SQAGLEPSAQTYTKLM--- 201
I E M++ + FN LI G+ + + + +L MM L+P+ +T L+
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 470
Query: 202 CGYAKHGDMDSIKTKIPS--LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
C K + +I K+ S +KP F L + S + + I+ M
Sbjct: 471 CNQRKIEEAWNIVYKMQSYGVKPDVVTF----NTLAKAYARIGSTCTAEDMIIPRMLHNK 526
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG-----------SSLVNGDYLDIIHALAV 308
++P+ +T ++ GY + G M+ R + +SL+ G +L+I +
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG-FLNIND---M 582
Query: 309 SGHGEYIDEVSA------IVCFVNICFHWLE-GPM---------MSQAGLEPSAQTYTKL 352
G GE +D + +V F + W G M M + G++P ++ L
Sbjct: 583 DGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSIL 642
Query: 353 MCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVG 409
GYA+ G+ + +++L Q V + Y II +G + ++ K+ VG
Sbjct: 643 AKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVG 702
Query: 410 YSADAANH 417
S + +
Sbjct: 703 LSPNLTTY 710
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 113/281 (40%), Gaps = 53/281 (18%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFL-AKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
V D+ +N L + Y T + D + ++ ++PN T +++ YC++
Sbjct: 491 VKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNG------YCEE 544
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G +E A + M++ + VFN+LI G NDM ++ +M + G++P T+
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
+ LM ++ G DM E I T M +
Sbjct: 605 STLMNAWSSVG-----------------------------------DMKRCEEIYTDMLE 629
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
G++P ++ L GYA+ G+ + +++L Q V + +I+ +SG +
Sbjct: 630 GGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFGVRPNV--VIYTQIISGWCSAGEM 687
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
A+ + +C GL P+ TY L+ G+ +
Sbjct: 688 KKAMQVYKKMC---------GIVGLSPNLTTYETLIWGFGE 719
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK 129
F EL V ++ +N+L++ +L+ + + +E G++P+ VT+ S
Sbjct: 553 FFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF------ST 606
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L++ + G+++ +I M + F+ L G+++A + A+ IL M + G
Sbjct: 607 LMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAKQILNQMRKFG 666
Query: 190 LEPSAQTYTKLMCGYAKHGDM 210
+ P+ YT+++ G+ G+M
Sbjct: 667 VRPNVVIYTQIISGWCSAGEM 687
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSF 232
A I + + G +PS TYT L+ + S+ K + LKP + LF
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILF----- 392
Query: 233 QLTNLLILVSSD---MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
N +I SS+ + A I M ++G +P+A T+ L+ GY K G ++ RLL
Sbjct: 393 ---NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 447
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 18/125 (14%)
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL---DIIH 304
A I + + G +PS TYT L+ + S+ L+++ + + D + II+
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 397
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
A + SG+ +D+ I M ++G +P+A T+ L+ GY K G ++
Sbjct: 398 ASSESGN---LDQAMKIF------------EKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 365 IRRLL 369
RLL
Sbjct: 443 SSRLL 447
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 112/271 (41%), Gaps = 24/271 (8%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ + ++ + G PN V Y + LI + Q A ++L+ MR++ +N
Sbjct: 441 NIVKEMGASGCRPNVVIY------TTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYN 494
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
+LI G S+A M A L M + G +P A TY + GY + G+ S + +
Sbjct: 495 SLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLEC 554
Query: 224 SEL---FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
+ LC L N + + +M+ Q G+ A+TYT LM G K+G +
Sbjct: 555 GVIPNKVLCTG--LINEYCKKGKVIEACSAFRSMVEQ-GILGDAKTYTVLMNGLVKNGKV 611
Query: 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
+ + + + D V +G ID S + + E M QA
Sbjct: 612 NDAEEIFHEMRGKGIAPD---------VFSYGTLIDGFSKLGNMQKASSIFDE---MVQA 659
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
GL + Y L+ G+ + G+++ + LL +
Sbjct: 660 GLTSNVIIYNMLLGGFCRSGEIEKAKELLDE 690
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 91/211 (43%), Gaps = 12/211 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y A + Y++ S ++ ++ G+ PN+V + LI++YC+ G +
Sbjct: 524 DAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLC------TGLINEYCKKGKVI 577
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A M ++ + L+ G + + AE I M G+ P +Y L+
Sbjct: 578 EACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLI 637
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQA 258
G++K G+M + + L + + N+L+ S ++ A+ +L MS
Sbjct: 638 DGFSKLGNMQKASSIFDEMVQAG---LTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK 694
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
G P+A TY ++ GY K GD+ +L +
Sbjct: 695 GFPPNAVTYCTIIDGYCKSGDLAEAFQLFDE 725
Score = 56.6 bits (135), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 131/344 (38%), Gaps = 58/344 (16%)
Query: 67 EDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS 126
E+ F G+ P D+ Y L+ + + + ++ G+ N + Y L+
Sbjct: 615 EEIFHEMRGKGIAP-DVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLG 673
Query: 127 NSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMS 186
+C+ G IE A ++L+ M K FP + + +I G+ ++ D+A A + M
Sbjct: 674 G------FCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMK 727
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI--------PSLKPQSELF-LCFSFQLTNL 237
GL P + YT L+ G + D++ T S P + L F F T L
Sbjct: 728 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTEL 787
Query: 238 -----------------------------LILVSSDMASAEGILTMMSQAGLEPSAQTYT 268
+ ++ +A+ + M +A L P+ TYT
Sbjct: 788 TTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYT 847
Query: 269 KLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
L+ GY K G +M SV + +G N Y II+A G A+V
Sbjct: 848 SLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGM-----TTKALV--- 899
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ G + S T L+ G+AK G+M+ +++
Sbjct: 900 --LLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVV 941
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 110/291 (37%), Gaps = 54/291 (18%)
Query: 130 LISKYCQDGNIEGATKIL----EFMRDKTFPISEGV-----------------FNALIYG 168
LI +C+DGN++ A +L E + T + E + +N LI G
Sbjct: 230 LIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDG 289
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
+ + A+ +L M+ GL Y+ L+ G K + D+ + +
Sbjct: 290 LCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHG---- 345
Query: 229 CFSFQ--LTNLLILVSSD---MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
FS + + I V S M A+ + M G+ P A+ Y L+ G+ + ++
Sbjct: 346 -FSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKG 404
Query: 284 RRLLAQ-SGSSLVNGDYL--DIIHALAVSG--HGEY--IDEVSAIVCFVNICFH------ 330
LL + ++V Y + + SG G Y + E+ A C N+ +
Sbjct: 405 YELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKT 464
Query: 331 WLEGPM----------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+L+ M + G+ P Y L+ G +K MD R L +
Sbjct: 465 FLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLE 515
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 65/316 (20%), Positives = 126/316 (39%), Gaps = 47/316 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+ L+ L + + + ++ S G + + Y I ++SK +G +E A
Sbjct: 318 YSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFIC---VMSK---EGAMEKAKA 371
Query: 146 ILEFMRDKTFPISEGV--FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+ + M TF ++ G + +LI G + ++ +L + + + S TY + G
Sbjct: 372 LFDGM--ITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKG 429
Query: 204 YAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMS 256
GD+D + + +P ++ T L+ L S A +L M
Sbjct: 430 MCSSGDLDGAYNIVKEMGASGCRPNVVIY-------TTLIKTFLQKSRFGDAVRVLKEMR 482
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSG---SSLVNGDYLD-IIHALAVS 309
+ G+ P Y L+ G +K MD R L ++G + G ++ I A +
Sbjct: 483 EQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFA 542
Query: 310 GHGEYIDEV-------SAIVCFVNICFHWLEGPM---------MSQAGLEPSAQTYTKLM 353
+Y+ E+ + ++C I + +G + M + G+ A+TYT LM
Sbjct: 543 SADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLM 602
Query: 354 CGYAKHGDMDSIRRLL 369
G K+G ++ +
Sbjct: 603 NGLVKNGKVNDAEEIF 618
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 130/307 (42%), Gaps = 27/307 (8%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L+++ +G+ P+ VTY LI YC++G I+ A +IL+ M + + +N
Sbjct: 356 MLSEMSEKGLIPSVVTYNALIDG------YCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
LI G + + A +L M + L PS TY L+ G K D++S + +
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ +++ + + + A + + G++ + YT L+ GY K G +D
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529
Query: 285 RLLAQ--SGSSLVNG-DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
LL + + + L N Y +I L + + E S++V M G
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLC---KEKKMKEASSLV------------AKMLTMG 574
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYID 398
++P+ TYT L+ K G D ++ S D Y +HA G E +D
Sbjct: 575 VKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVD 634
Query: 399 EIISKIQ 405
++I+K+
Sbjct: 635 DVIAKMN 641
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 136/369 (36%), Gaps = 66/369 (17%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y +L+ + N+ + + + +G + N V+Y + LI C+ G I
Sbjct: 228 DTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSY------TNLIHGLCEAGRIN 281
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ M + + + LIY S + A + M + G EP+ TYT L+
Sbjct: 282 EALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLI 341
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K MD A +L+ MS+ GL
Sbjct: 342 DGLCKENKMD-----------------------------------EARKMLSEMSEKGLI 366
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRL--LAQSGSSLVNG-DYLDIIHALAVSGHGEYIDEV 318
PS TY L+ GY K G +D + L +S S N Y ++I L +V
Sbjct: 367 PSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKK------RKV 420
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSS 375
+ +N M + L PS TY L+ G K D++S RLL+ +NG
Sbjct: 421 HKAMALLN---------KMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYR 432
Y I L G E + ++ G A+ + I G+ID AY
Sbjct: 472 PDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK-GVKANEVIYTALIDGYCKVGKIDVAYS 530
Query: 433 IVNTLARSA 441
++ + A
Sbjct: 531 LLERMLNDA 539
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 99/234 (42%), Gaps = 54/234 (23%)
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E T LE + ++ P + FNA++ G+ + ++ AE + + QAGL P TYT L
Sbjct: 177 EMKTVYLELLNNQISP-NIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSL 235
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ G+ ++ +D+ E+FL +M Q G
Sbjct: 236 ILGHCRNKGVDN----------AYEVFL-------------------------IMPQKGC 260
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
+ + +YT L+ G + G ++ +L A + Y +I+AL+ SG +
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGR-----K 315
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
V A+ F M + G EP+ TYT L+ G K MD R++L++
Sbjct: 316 VEALNLFNE----------MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSE 359
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 114/299 (38%), Gaps = 48/299 (16%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + + +AK+ + G++P VTY + LI + +DG + A K
Sbjct: 547 YNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTY------TILIGEMLKDGAFDHALK 600
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M + + A ++ + + + ++ M++ G+ P TYT L+ GYA
Sbjct: 601 VFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYA 660
Query: 206 K----HGDMDSIKTKI-----PSLKPQSELFLCFS----FQLTNLLILVSSDMASAE--- 249
+ H D +K + PSL S L S + T I + S + E
Sbjct: 661 RLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEI 720
Query: 250 --GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL------AQSGSSLVNGDYLD 301
+ M + G Y L+ G+ + ++ + L+ S S + LD
Sbjct: 721 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 780
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
L V + E + V A+V + GL P ++Y L+CG G
Sbjct: 781 CCCKLGV--YAEAVRLVDAMV----------------ENGLLPLLESYKLLVCGLYIEG 821
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 114/309 (36%), Gaps = 46/309 (14%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H L D+ Y A L Y D +AK+ +GI P+ VTY + LI
Sbjct: 604 HMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTY------TVLID 657
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS--------------- 177
Y + G A L+ M D S + + LI S N M
Sbjct: 658 GYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLE 717
Query: 178 ---AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234
A + M + G Y L+ G+ + ++ + + +K + + S +
Sbjct: 718 YEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERG---MSPSEDI 774
Query: 235 TNLLILVSSDM---ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
N L+ + A A ++ M + GL P ++Y L+CG G + + +
Sbjct: 775 YNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLL 834
Query: 292 SSLVNGDYLDIIHALAVSG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY 349
S N D ++ + + G + +DE S ++ +M + G +P+ TY
Sbjct: 835 SCGYNYD--EVAWKVLIDGLLKRDLVDECSELI------------DIMEEKGCQPNPLTY 880
Query: 350 TKLMCGYAK 358
+ L+ G +
Sbjct: 881 SLLIEGLER 889
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 111/293 (37%), Gaps = 55/293 (18%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
PLD Y +L+ N T L K+E + PN +TY S +I C+D
Sbjct: 157 PLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITY------STVIDGLCKDRL 210
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
I A ++ + + + +N+LI+G A +LTMM + + P T+
Sbjct: 211 IADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNI 270
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L+ K G + A+G+ +M + G
Sbjct: 271 LVDALCKEG-----------------------------------RIVEAQGVFAVMMKRG 295
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV- 318
+P TY LM G+ ++ R L + + D L+ + + ++G+ + ID V
Sbjct: 296 EKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLN--YNVLINGYCK-IDMVD 352
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
A+V F I L P+ TY L+ G K G M ++ L+ +
Sbjct: 353 EAMVLFKEI----------RCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDE 395
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 108/303 (35%), Gaps = 43/303 (14%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
+D+ YN+L+ T L + I P+ T+ + L+ C++G I
Sbjct: 228 VDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTF------NILVDALCKEGRI 281
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A + M + +NAL+ G +N+++ A + M + GLEP Y L
Sbjct: 282 VEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVL 341
Query: 201 MCGYAKHGDMDS---------IKTKIPSLKPQSELF--LCFSFQLTNLLILVSSDMASAE 249
+ GY K +D K +P+L + L LC M+ +
Sbjct: 342 INGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLC-----------KLGRMSCVQ 390
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL-DIIHALAV 308
++ M G P TY + + K + L Q + Y+ D+I
Sbjct: 391 ELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFC 450
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
G I E + ++ H G P+ +TYT ++ K D L
Sbjct: 451 KGEKLKIAEEA----LQHLLIH----------GCCPNVRTYTIMINALCKDCSFDEAMTL 496
Query: 369 LAQ 371
L++
Sbjct: 497 LSK 499
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 141/352 (40%), Gaps = 56/352 (15%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + ++ +Q I+PN VTY + +I C++G I A +
Sbjct: 189 YNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTY------TTMICALCEEGCIGDAER 242
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M++ ++ +N L+ GH Q +D+ SA + + ++GL P+A +T L+ G+
Sbjct: 243 LFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFC 302
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEP 262
K K + + + + N L+ S + A + M++ GL P
Sbjct: 303 KAKRFSEAKGMFLEMP---RFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCP 359
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
T + ++ G G M R L VN L + + IDE I
Sbjct: 360 DEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVN---------LNAAAYNALIDEYCRI- 409
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL 382
N+ M++ G+EP+ +Y+ L+ G++K G M
Sbjct: 410 --GNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQI------------------ 449
Query: 383 DIIHALAVSGHGEYIDEIISKIQPG-VGYSADAANHIYHLINKGQIDAAYRI 433
A+A+ Y + + I+P V Y+A H G IDAA+R+
Sbjct: 450 ----AMAI-----YTEMVAKGIEPNVVTYTALIHGH----AKNGGIDAAFRL 488
Score = 48.9 bits (115), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 94/239 (39%), Gaps = 33/239 (13%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
G + D F E V L+ + YNAL+ Y + ++ GIEPN V+Y
Sbjct: 375 GQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSY 434
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
S LI + + G ++ A I M K + + ALI+GH++ + +A +
Sbjct: 435 ------SSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRL 488
Query: 182 LTMMSQAGLEPSAQTYTKLMCGYAK----------------------HGDMDSIKTKIPS 219
M + G+ P+A T + L+ G + H + +
Sbjct: 489 HKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEEC 548
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
L P S +++ + L + A + + M ++G+ P + TYT L+ G G
Sbjct: 549 LIPNSVIYMTLIYGL-----YLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLG 602
Score = 40.8 bits (94), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 135/364 (37%), Gaps = 38/364 (10%)
Query: 149 FMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 208
F R +T P NA++ G +A A + M + GL PS TY L+ G
Sbjct: 142 FRRLRTLPALPAC-NAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQG 200
Query: 209 DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYT 268
+ + + Q ++ + + AE + M +AG++P+ TY
Sbjct: 201 TVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYN 260
Query: 269 KLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNIC 328
LM G+ + D++S L + S +N + + + + E +
Sbjct: 261 VLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGM------- 313
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLD---II 385
+LE P + G+ P+ Y LM G + G+ L + + D ++
Sbjct: 314 --FLEMP---RFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVV 368
Query: 386 HALAVSGHGEYIDEIISKIQP-GVGYSADAANH-IYHLINKGQIDAAYRIV--------- 434
L G D + +Q GV +A A N I G ++ A
Sbjct: 369 RGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIE 428
Query: 435 -NTLARSANINGE----QLPVGGFLVRHMV-KTNQPG-VGYSADAANHIYHLINKGQIDA 487
N ++ S+ I+G ++ + + MV K +P V Y+A H G IDA
Sbjct: 429 PNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGH----AKNGGIDA 484
Query: 488 AYRI 491
A+R+
Sbjct: 485 AFRL 488
>gi|410109917|gb|AFV61038.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
diamantinensis]
Length = 284
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 36/222 (16%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD+D
Sbjct: 83 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYXRLGDLDEGF 142
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + Q ++ +S+ + + S M A + M GL P+ T+T L+
Sbjct: 143 RLKSAMLASGVQPDV---YSYSVLINGLCKESKMDDANELFDEMLVKGLAPNGVTFTTLI 199
Query: 272 CGYAKHGDMDSV----RRLLAQS-GSSLVNGDYLDIIHALAVSGH----GEYIDEVSAIV 322
G+ K G +D +R+L+QS L+ Y +I+ L G + IDE
Sbjct: 200 DGHCKKGRVDLAMEIYKRMLSQSLLPDLIT--YNTLIYGLCKKGDLKQANDLIDE----- 252
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
M GL+P TYT L+ G K G++D+
Sbjct: 253 --------------MGMKGLKPDKITYTTLIDGCCKEGNLDT 280
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C+ G ++
Sbjct: 156 DVYSYSVLINGLCKESKMDDANELFDEMLVKGLAPNGVTF------TTLIDGHCKKGRVD 209
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ M GL+P TYT L+
Sbjct: 210 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMGMKGLKPDKITYTTLI 269
Query: 202 CGYAKHGDMDS 212
G K G++D+
Sbjct: 270 DGCCKEGNLDT 280
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 25/154 (16%)
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YL 300
D+ A+ + +++ GL PS +Y LM GY + GD+D RL + +S V D Y
Sbjct: 102 DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYXRLGDLDEGFRLKSAMLASGVQPDVYSYS 161
Query: 301 DIIHALA----VSGHGEYIDEV-------SAIVCFVNICFHWLEGP----------MMSQ 339
+I+ L + E DE+ + + I H +G M+SQ
Sbjct: 162 VLINGLCKESKMDDANELFDEMLVKGLAPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQ 221
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
+ L P TY L+ G K GD+ L+ + G
Sbjct: 222 S-LLPDLITYNTLIYGLCKKGDLKQANDLIDEMG 254
>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Glycine max]
Length = 875
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 103/507 (20%), Positives = 196/507 (38%), Gaps = 84/507 (16%)
Query: 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
NRV Y + L+S++C++ A +++E M + FN+ I +A +
Sbjct: 218 NRVVY------NTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVM 271
Query: 177 SAEGI---LTMMSQAGL-EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL--FLCF 230
A I + M ++ GL P+ T+ ++ G+ KHG M + + ++K C+
Sbjct: 272 EASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECY 331
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
+ L LL + ++ A +L M G+EP+A TY +M G ++ + R L+
Sbjct: 332 NIWLMGLL--RNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLM--- 386
Query: 291 GSSLVNGDYLDII-HALAVSGH---GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
+ NG Y D + ++ + G+ G+ + S + M + G +P+
Sbjct: 387 DLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVL-------------HEMIRNGCQPNT 433
Query: 347 QTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLD---IIHALAVSGHGEYIDEIISK 403
T L+ K G +L + D + +++ L +G + EI+S+
Sbjct: 434 YTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSE 493
Query: 404 IQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGF------LVRH 457
+ S D N LIN + + + + + + ING VG +
Sbjct: 494 MWTNGPTSLDKGNSFASLINSIH-NVSNCLPDGITYTTLING-LCKVGRLEEAKKKFIEM 551
Query: 458 MVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMV 517
+ K +P S I+ +G+I +A+R++ + R N + L L+ +
Sbjct: 552 LAKNLRPD---SVTYDTFIWSFCKQGKISSAFRVLKDMER--NGCSKTLQTYNALILGLG 606
Query: 518 KTNQPID----------------------------------KVLAVCHRLTDENLHPRAF 543
NQ + +++ H + D+ + P
Sbjct: 607 SNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVS 666
Query: 544 NLAVLIKAHVLKEDYTGAVETFEYCVN 570
+ +LIKA D+ A E FE +N
Sbjct: 667 SFKILIKAFSKSSDFKVACELFEVALN 693
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 65/160 (40%), Gaps = 14/160 (8%)
Query: 53 WCSEP-SLGPGNLPCEDPFSVHTGELDVPLDISH---YNALLRVYLDNEHTFSPTDFLAK 108
W + P SL GN S+H +P I++ N L +V E + LAK
Sbjct: 495 WTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAK 554
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ P+ VTY I + +C+ G I A ++L+ M + +NALI G
Sbjct: 555 ----NLRPDSVTYDTFIWS------FCKQGKISSAFRVLKDMERNGCSKTLQTYNALILG 604
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 208
N + G+ M + G+ P TY ++ + G
Sbjct: 605 LGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGG 644
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 147/383 (38%), Gaps = 46/383 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN++L V + E ++ PNR T+ L++ C++G +
Sbjct: 165 DVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNG------LCKNGKTD 218
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ + M K P + ++ ++ G QA +L M +G P + T L+
Sbjct: 219 DALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALL 278
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K G +D + + + + + + + + M +AG+E
Sbjct: 279 DGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIE 338
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P YT L+ G+ + G +D +L Q G S Y +I G +D+
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVG---LLDKA 395
Query: 319 SAIVCFV--NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN---G 373
++ + N CF P++ TYT L+CG ++G +D R++ Q G
Sbjct: 396 RSLQLEISKNDCF--------------PTSCTYTILICGMCRNGLLDEARQIFNQMENLG 441
Query: 374 SSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPG---------------VGYSADAANHI 418
S + +I L +G E + K++ G V +A +
Sbjct: 442 CSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMV 501
Query: 419 YHLINKGQIDAAYRIVNTLARSA 441
L G I AY+++ LA S
Sbjct: 502 ERLCESGLILKAYKLLMQLADSG 524
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 107/294 (36%), Gaps = 59/294 (20%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P + Y +L + T L ++ G P+ +T L+ +C+ G
Sbjct: 232 IPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDG------FCKLG 285
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
I+ A +L+ + + + +++LI G +A + M +AG+EP YT
Sbjct: 286 QIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYT 345
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G+ + G +D A +L M+Q
Sbjct: 346 ILIRGFCEVGMVD-----------------------------------YALNMLNDMTQR 370
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
GL P Y L+ G+ G +D R L ++++ + Y +I + +G +
Sbjct: 371 GLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNG---LL 427
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
DE I M G PS T+ L+ G K G+++ R L
Sbjct: 428 DEARQIF------------NQMENLGCSPSIMTFNALIDGLCKAGELEEARHLF 469
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 22/261 (8%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G+ P V Y LI+ YCQ ++ GA I E M+ + +NALI G +
Sbjct: 364 GLVPTTVIYNTLING------YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKL 417
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+ AE ++ M ++G++PS +T+ L+ Y G ++ T + ++ + SF
Sbjct: 418 EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISF 477
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
+ + A IL M + P+AQ Y ++ Y + GD + L+ + +
Sbjct: 478 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKN 537
Query: 293 SLVNGDYLDIIHALAVSG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYT 350
S V+ + + L + G IDE ++ + GL P +Y
Sbjct: 538 SGVSASI--VTYNLLLKGLCRSSQIDEAEELI------------YTLRNQGLRPDVVSYN 583
Query: 351 KLMCGYAKHGDMDSIRRLLAQ 371
++ GD D LL +
Sbjct: 584 TIISACCNKGDTDKALELLQE 604
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 81/204 (39%), Gaps = 6/204 (2%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNAL+ E D + ++E G++P+ T+ + LI Y G +E
Sbjct: 407 YNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF------NTLIDAYGTAGQLEKCFT 460
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M+ K F +++ + + A IL M + P+AQ Y ++ Y
Sbjct: 461 VLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYI 520
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ GD + + +K ++ L + SS + AE ++ + GL P
Sbjct: 521 ESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVV 580
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ 289
+Y ++ GD D LL +
Sbjct: 581 SYNTIISACCNKGDTDKALELLQE 604
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 95/530 (17%), Positives = 199/530 (37%), Gaps = 55/530 (10%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P D YN ++ + ++ G+ PNR+TY +I + + G+
Sbjct: 191 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDG------HVKGGD 244
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+E ++ + M + +N L+ G + M ++ M+ + P TY+
Sbjct: 245 LEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSI 304
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L G + G+ ++ + + + ++ + + +A A+ + M+ G
Sbjct: 305 LFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTG 364
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
L P+ Y L+ GY + D+ + Q S + D+ I + ++G
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDH--ITYNALING--------- 413
Query: 320 AIVCFVNICFHWLEGPM-MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
+C + + + M M ++G++PS +T+ L+ Y G ++ +L+ +
Sbjct: 414 --LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIK 471
Query: 379 GDYL---DIIHALAVSGH-GEYIDEIISKIQPGVGYSADAANHIYH-LINKGQIDAAYRI 433
D + ++ A +G E + + I V +A N I I G + A +
Sbjct: 472 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLL 531
Query: 434 VNTLAR---SANINGEQLPVGGFLVRHMVKTNQPGV------GYSADAANH---IYHLIN 481
V + SA+I L + G + + + G D ++ I N
Sbjct: 532 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 591
Query: 482 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTD-ENLHP 540
KG D A ++ + + + +R ++T + LA R+ D E L+
Sbjct: 592 KGDTDKALELLQEMNK-------------YGIRPTLRTCHTLVSALASAGRVHDMECLYQ 638
Query: 541 RAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATPWKGELLKRFIQAED 590
+ + V + + Y V+ + C N + K E+ ++ I +D
Sbjct: 639 QMLHKNVEPSSSI----YGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 684
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
DV + YN+++ Y+++ T + K+++ G+ + VTY L+ C+
Sbjct: 504 DVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKG------LCRS 557
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
I+ A +++ +R++ +N +I D A +L M++ G+ P+ +T
Sbjct: 558 SQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTC 617
Query: 198 TKLMCGYAKHG---DMDSIKTKI--PSLKPQSELF 227
L+ A G DM+ + ++ +++P S ++
Sbjct: 618 HTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIY 652
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ ++ Y + +F+ ++ ++ + PN VTY S LI C+ G ++
Sbjct: 359 DVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTY------SSLIDGLCKAGRVD 412
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L+ M +K S G FN++I + DM A +L M+ GLEP TYT L+
Sbjct: 413 HAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLL 472
Query: 202 CGYAKHGDMD 211
G+++ G M+
Sbjct: 473 EGFSRTGRME 482
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 133/311 (42%), Gaps = 40/311 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y AL+ + + + L +E + PN VTY S L+ C+ G+++
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTY------SSLLHGLCKAGDLD 236
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M K + + LI+G A+ + +A ++ M+ P +Y L+
Sbjct: 237 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALL 296
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSEL-----FLCFSFQLTNLLILVSSDMASAEGIL-TMM 255
GY + G ++ K + +S L + C N +S + A +L M
Sbjct: 297 DGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCN-----ASRLEEARFLLENMK 351
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDM----DSVRRLLAQ-------SGSSLVNG--DYLDI 302
+ AG++P TY+ ++ GY++ + ++ ++A+ + SSL++G +
Sbjct: 352 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 411
Query: 303 IHALAVSGH----------GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
HA+ V + G + + A+ ++ W M+ GLEP TYT L
Sbjct: 412 DHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTL 471
Query: 353 MCGYAKHGDMD 363
+ G+++ G M+
Sbjct: 472 LEGFSRTGRME 482
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 142/342 (41%), Gaps = 71/342 (20%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
L S +P+ VTY LI +C+ GN+E A K+L M + + +++L++G
Sbjct: 175 LTSSSWKPDVVTYTALIDG------FCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHG 228
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
+A D+ A + M+ G P+ TYT L+ HG L
Sbjct: 229 LCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLI-----HG-------------------L 264
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
C + ++ +A ++ M+ P +Y L+ GY + G ++ ++L
Sbjct: 265 CAAHKVD-----------AARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFK 313
Query: 289 QSGSSLVNGDYLDIIHALAVSG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
+ + D I + V G + ++E +L M + AG++P
Sbjct: 314 EMATKSCLPDR--ITYTCLVRGFCNASRLEEA-----------RFLLENMKTAAGIDPDV 360
Query: 347 QTYTKLMCGYAKHGDM----DSIRRLLAQNGSSLVNG-DYLDIIHALAVSGHGEYIDEII 401
TY+ ++ GY++ + I+ ++A+N + N Y +I L +G ++ E++
Sbjct: 361 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAP--NAVTYSSLIDGLCKAGRVDHAMEVL 418
Query: 402 -----SKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLA 438
+++P VG + L G +D A++++ +A
Sbjct: 419 KNMVNKRVEPSVGTFNSVIGALCRL---GDMDEAWKLLVAMA 457
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 17/208 (8%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P D YNALL Y ++ ++ P+R+TY L+ +C
Sbjct: 286 PPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRG------FCNASR 339
Query: 140 IEGATKILEFMRDKTFPISEGV-FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A +LE M+ + V ++ ++ G+S+A A + M + P+A TY+
Sbjct: 340 LEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYS 399
Query: 199 KLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
L+ G K G +D + ++ +P F L L DM A +L
Sbjct: 400 SLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRL-----GDMDEAWKLLV 454
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
M+ GLEP TYT L+ G+++ G M+
Sbjct: 455 AMAAHGLEPGMVTYTTLLEGFSRTGRME 482
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 129/333 (38%), Gaps = 35/333 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ FL + S G +PN +T+ ++ + C G
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRS------MCSTGRWM 326
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+L M K F S FN LI + + A IL M + G +P++ +Y L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLL 386
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT--NLLILVSSD--MASAEGILTMMSQ 257
G+ K MD + + + C+ +T +L + D + A IL +S
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRG----CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY 314
G P TY ++ G AK G +LL + + + D Y ++ L+ G
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK--- 499
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---Q 371
+DE FH E + G+ P+A T+ +M G K D L
Sbjct: 500 VDEAIKF-------FHEFE-----RMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMIN 547
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI 404
G Y +I LA G + E+++++
Sbjct: 548 RGCKPTETSYTILIEGLAYEGMAKEALELLNEL 580
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 135/341 (39%), Gaps = 48/341 (14%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+ V D+ YN +LR D+ + L ++ + P+ +TY LI + C
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEAT------C 250
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+D + A K+L+ MRD+ +N L+ G + + A L M +G +P+
Sbjct: 251 RDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 196 TYT---KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS-----SDMAS 247
T+ + MC + MD+ K L+ FS + IL++ +
Sbjct: 311 THNIILRSMCSTGRW--MDAEKLLADMLRKG------FSPSVVTFNILINFLCRKGLLGR 362
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII---- 303
A IL M + G +P++ +Y L+ G+ K MD L + S G Y DI+
Sbjct: 363 AIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS---RGCYPDIVTYNT 419
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
A+ G+ D V + +S G P TY ++ G AK G
Sbjct: 420 MLTALCKDGKVEDAVEIL-------------NQLSSKGCSPVLITYNTVIDGLAKAGKTG 466
Query: 364 SIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEII 401
+LL + + + D Y ++ L+ G +DE I
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK---VDEAI 504
Score = 48.5 bits (114), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 81/358 (22%), Positives = 122/358 (34%), Gaps = 81/358 (22%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+VP DI L+R + T L LE G P+ +TY +IS YC+
Sbjct: 133 NVP-DIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISG------YCKA 185
Query: 138 GNIEGATKILEFMRDKTFPISEGV--FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G I A +L+ M +S V +N ++ + + A +L M Q P
Sbjct: 186 GEINNALSVLDRM-----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
TYT L+ + S + A +L M
Sbjct: 241 TYTILIEATCR-----------------------------------DSGVGQAMKLLDEM 265
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS----------------LVNGDY 299
G P TY L+ G K G +D + L SS G +
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 300 LDIIHALAVSGHGEYIDEVSAIVCFVN-ICFHWLEG------PMMSQAGLEPSAQTYTKL 352
+D LA + V +N +C L G M + G +P++ +Y L
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPL 385
Query: 353 MCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDII------HALAVSGHGEYIDEIISKI 404
+ G+ K MD L + S G Y DI+ AL G E EI++++
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVS---RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 884
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 103/241 (42%), Gaps = 41/241 (17%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ Y T FL + G +P+ +T+ S +I+ +C +GN+
Sbjct: 312 DVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITF------STIITAFCNEGNVV 365
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A KI E +++ + ++N L+ G+ +A D+ A + M G+ P T+ L+
Sbjct: 366 EARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILV 425
Query: 202 CGYAKHG-DMDSIKT----KIPSLKPQSELF------LCFSFQLTNLLILVSS------- 243
G K+G + DS + + SL P L+ LC++ QL + +
Sbjct: 426 AGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMP 485
Query: 244 -DMASAEGILTMMSQAGLE----------------PSAQTYTKLMCGYAKHGDMDSVRRL 286
+ + ++ S+AG E PS+ T + ++ G +K G + R L
Sbjct: 486 PSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDL 545
Query: 287 L 287
L
Sbjct: 546 L 546
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 128/357 (35%), Gaps = 74/357 (20%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS-NSKL---- 130
E+ + +++ YN L+ Y ++ +GI P+ T+ L++ N K
Sbjct: 376 EVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEA 435
Query: 131 ------------------------ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
++ C G ++ A + LE M +K P S FN++I
Sbjct: 436 DSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVI 495
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--------IKTKIP 218
+S+A +A +M GL PS+ T + ++ G +K G + I +P
Sbjct: 496 AAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLP 555
Query: 219 SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
K + L F++ D A A + M G+ P A ++ + G +K G
Sbjct: 556 VNKVAFTVLLDGYFKV--------GDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAG 607
Query: 279 DMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSG--------------HGEYIDEVSAI 321
++ +++ G N Y +IH L G G D +
Sbjct: 608 LVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTN 667
Query: 322 VCFVNICFHWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ C EG M M G+ P TY L+ GY K DM S L
Sbjct: 668 IIINGFC---KEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFL 721
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 112/300 (37%), Gaps = 42/300 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D S N L+R ++++E + + L+++ G+ P+ S L + G+
Sbjct: 207 DFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAI------SILFRLLLRVGDYG 260
Query: 142 GATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
K+L M RD P + FN +I Q + AE +L +M + EP Y L
Sbjct: 261 SVWKLLRGMIRDGPRPCNHN-FNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNIL 319
Query: 201 MCGYAKHGDMDS--------IKTKI-PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
+ Y G IK PSL S + F + ++ A I
Sbjct: 320 INAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNE---------GNVVEARKI 370
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV--NGDYLDIIHALAVS 309
+ + GL P+ Y LM GY K D+ L + + +G +I+ V+
Sbjct: 371 FEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNIL----VA 426
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G+ +Y E + F + W S + L P Y + G G +D + L
Sbjct: 427 GNYKYGKEADSYELFRD----W------SLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFL 476
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 16/202 (7%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P++ + LL Y T ++E++GI P+ + + S I + G
Sbjct: 554 LPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAF------SAFIDGLSKAG 607
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A + M K F + V+N+LI+G + A + M Q GL P T
Sbjct: 608 LVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTN 667
Query: 199 KLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
++ G+ K G M S + P + + +L DM SA+ L
Sbjct: 668 IIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVL-----DMVSADEFLN 722
Query: 254 MMSQAGLEPSAQTYTKLMCGYA 275
M +G +P TY + G+
Sbjct: 723 KMYASGWDPDITTYNIRIQGFC 744
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 16/224 (7%)
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G ++ A +L M DK P+++ F L+ G+ + D A A + M G+ P A
Sbjct: 535 KKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAI 594
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILT 253
++ + G +K G ++ + + F+ +F +L+ + + A +
Sbjct: 595 AFSAFIDGLSKAGLVEEAYEAFSEMSKKG--FVPNNFVYNSLIHGLCNCGKLHEALKLER 652
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
M Q GL P T ++ G+ K G M S A+ V D + + + G+ +
Sbjct: 653 EMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPD--TVTYNTLIGGYCK 710
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
+D VSA F+N M +G +P TY + G+
Sbjct: 711 VLDMVSADE-FLN---------KMYASGWDPDITTYNIRIQGFC 744
Score = 39.7 bits (91), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 80/199 (40%), Gaps = 20/199 (10%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++ +G+ P+ + + + +I+ +C++G ++ A M +N LI
Sbjct: 653 EMRQKGLLPD------IFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIG 706
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL-----KP 222
G+ + DM SA+ L M +G +P TY + G+ + T + L P
Sbjct: 707 GYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVP 766
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTM-MSQAGLEPSAQTYTKLMCGYAKHGDMD 281
+ + ++ V +DM +LT + + P+ T L+ + K G M
Sbjct: 767 NTVTY-------NTMMNAVCTDMLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQG-MP 818
Query: 282 SVRRLLAQSGSSLVNGDYL 300
+ Q + L+ D++
Sbjct: 819 EKALIWGQKLNKLLRADFI 837
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 132/315 (41%), Gaps = 38/315 (12%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P+++ +L++ Y + S + K+ G+ PN+VTY S LI C GN
Sbjct: 362 PMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTY------SVLIEGCCNSGN 415
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
IE A+++ M+ P S N+L+ G+ +A A + G+ + TY
Sbjct: 416 IEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNI 474
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
+M K G MD + + ++ Q + S+ L +M A + + M
Sbjct: 475 MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD 534
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS-SLVNGDYL--DIIHALAVSGH-GEYI 315
L+P+ TY+ L+ G K GD + L Q S ++ D+ II+ L G E
Sbjct: 535 LKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEAR 594
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQN 372
D++ + + G PS TY ++ G+ K G++DS + R + +
Sbjct: 595 DKLKNFL----------------EEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEF 638
Query: 373 G--------SSLVNG 379
G +SL+NG
Sbjct: 639 GVSPNVVTYTSLING 653
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 147/367 (40%), Gaps = 31/367 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN ++ L + +QG+ PN V+Y +I +C+ GN++
Sbjct: 468 NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILG------HCRKGNMD 521
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A+ + M + + ++ LI G+ + D A + M + P+ T+ ++
Sbjct: 522 MASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTII 581
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K G M + K+ + + + C ++ + ++ SA + M + G+
Sbjct: 582 NGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVS 641
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAVSGHGEYIDEVSA 320
P+ TYT L+ G+ K +D L G LD+ ++ + G + D SA
Sbjct: 642 PNVVTYTSLINGFCKSNRIDLA---LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESA 698
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLV 377
F F LE GL P+ Y ++ G+ +M++ + + +
Sbjct: 699 QDLF----FELLE------VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCD 748
Query: 378 NGDYLDIIHALAVSGH----GEYIDEIISK-IQPGVGYSADAANHIYHLINKGQIDAAYR 432
G Y +I L G + E++SK I P + N L NKGQ++ A +
Sbjct: 749 LGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVN---GLCNKGQLENARK 805
Query: 433 IVNTLAR 439
I+ + R
Sbjct: 806 ILEEMDR 812
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 108/287 (37%), Gaps = 73/287 (25%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+++ ++ + S ++ G+ PN VTY + LI+ +C+ I+ A K
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY------TSLINGFCKSNRIDLALK 665
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ MR+K + ++ALI G + DM SA+ + + + GL P+ Y ++ G+
Sbjct: 666 TRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFR 725
Query: 206 KHGDMDS--------IKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMM 255
+M++ I +IP C T L+ +L + A + M
Sbjct: 726 DLNNMEAALVWYKKMINDRIP----------CDLGTYTTLIDGLLKEGRLVFASDLYMEM 775
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
G+ P T+ L+ G G +++ R++L +
Sbjct: 776 LSKGIVPDIITFHVLVNGLCNKGQLENARKILEE-------------------------- 809
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
M + + PS Y L+ GY + G++
Sbjct: 810 ---------------------MDRKNMTPSVLIYNTLIAGYFREGNL 835
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P D+ Y L+ L +D ++ S+GI P+ +T+ L++ C G
Sbjct: 745 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNG------LCNKG 798
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A KILE M K S ++N LI G+ + ++ A + M GL P TY
Sbjct: 799 QLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYD 858
Query: 199 KLMCGYAKHGD 209
L+ G K GD
Sbjct: 859 ILINGKFK-GD 868
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 77/205 (37%), Gaps = 41/205 (20%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + LD++ Y+AL+ + S D +L G+ PNR+ Y +IS + ++
Sbjct: 672 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLN--- 728
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
N+E A + M + P G + LI G + + A + M G+ P
Sbjct: 729 ---NMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDII 785
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+ L+ G LC QL N A IL M
Sbjct: 786 TFHVLVNG------------------------LCNKGQLEN-----------ARKILEEM 810
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDM 280
+ + PS Y L+ GY + G++
Sbjct: 811 DRKNMTPSVLIYNTLIAGYFREGNL 835
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 96/258 (37%), Gaps = 57/258 (22%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S +I C+ N ++LE M+++ + SE F ++I +M A + M
Sbjct: 299 SIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMIN 358
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
G + T LM GY G++D S
Sbjct: 359 CGKPMNLVVATSLMKGYCAQGNLD-----------------------------------S 383
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSSLVN 296
A + +++ GL P+ TY+ L+ G G+++ L Q + +SL+
Sbjct: 384 ALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLR 443
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWL-EGPMMSQA----------GLEPS 345
G + A E +D A + NI WL +G M +A G+ P+
Sbjct: 444 GYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPN 503
Query: 346 AQTYTKLMCGYAKHGDMD 363
+Y ++ G+ + G+MD
Sbjct: 504 VVSYNDMILGHCRKGNMD 521
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 134/325 (41%), Gaps = 55/325 (16%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN--------------- 127
I+ + L+ Y HT LA + G +PN VT+ +I+
Sbjct: 90 IATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149
Query: 128 --------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
LI+ ++G I+ A +L+ M + + +++ALI G +
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLM---CGYAKHGDMDSIKTKI--PSLKPQSELFL 228
++ A G+ + + + G+ A TY L+ C + ++ + TK+ ++ P
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDD---- 265
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
++F + + + A+G+L MMS+ G +P TY LM GY ++ R L
Sbjct: 266 -YTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324
Query: 289 QSGSSLVNGDYLDIIHALAVSGH--GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
+ + D L+ + + + G+ + +DE A+V F +C L P+
Sbjct: 325 RMVKRGLEPDVLN--YNVLIDGYCKTKMVDE--AMVLFKELC----------NKNLVPTI 370
Query: 347 QTYTKLMCGYAKHGDMDSIRRLLAQ 371
+Y L+ G G + +++LL +
Sbjct: 371 ASYNSLIDGLCNSGRISHVKKLLDE 395
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 109/322 (33%), Gaps = 82/322 (25%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI---------------- 125
DI YNAL+ Y E+ + ++ +G+EP+ + Y LI
Sbjct: 299 DIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358
Query: 126 -------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
S + LI C G I K+L+ M P +N LI +
Sbjct: 359 KELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKE 418
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+ A G+L MM + G++P+ TY +M GY
Sbjct: 419 GRILEALGVLVMMMKKGVKPNIVTYNAMMDGYC--------------------------- 451
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
+ +++ A+ I M ++GLEP Y L+ GY K +D L +
Sbjct: 452 --------LRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRH 503
Query: 293 SLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY 349
+ D Y +I L G ++ E+ +C +G P TY
Sbjct: 504 KNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC---------------DSGQSPDVITY 548
Query: 350 TKLMCGYAKHGDMDSIRRLLAQ 371
L+ + K D L Q
Sbjct: 549 NILLDAFCKTQPFDKAISLFRQ 570
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 126/305 (41%), Gaps = 38/305 (12%)
Query: 107 AKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
+++ +GI + VTY LI C G + T++L M + + FN LI
Sbjct: 219 SQIGERGILLDAVTYNSLIDGC------CSVGRWQEVTQLLTKMVRENVDPDDYTFNILI 272
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL 226
+ + A+G+L MMS+ G +P TY LM GY ++ + + +
Sbjct: 273 DALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG-- 330
Query: 227 FLCFSFQLTNLLILV-----SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
+ N +L+ + + A + + L P+ +Y L+ G G +
Sbjct: 331 ---LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRIS 387
Query: 282 SVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
V++LL + S D Y +I AL G ++ + +V MM
Sbjct: 388 HVKKLLDEMHGSAQPPDVVTYNILIDALC--KEGRILEALGVLV-------------MMM 432
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH--GEY 396
+ G++P+ TY +M GY +++ + + + S + D L+ + + ++G+ E
Sbjct: 433 KKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILN--YNVLINGYCKTEM 490
Query: 397 IDEII 401
+DE I
Sbjct: 491 VDEAI 495
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 13/211 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YNA++ Y + D ++ G+EP+ + Y + LI+ YC+ ++
Sbjct: 439 NIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNY------NVLINGYCKTEMVD 492
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + MR K +N+LI G + + +L M +G P TY L+
Sbjct: 493 EAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILL 552
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQA 258
+ K D K SL Q + F + ++ + AE L +
Sbjct: 553 DAFCKTQPFD----KAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH 608
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
G P+ QTYT L+ K G LL++
Sbjct: 609 GCSPNVQTYTILINALCKDGSFGEAMLLLSK 639
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/368 (19%), Positives = 137/368 (37%), Gaps = 22/368 (5%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
G + V D Y L+RV D L + +G +PN VTY + L+
Sbjct: 135 GSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTY------TVLLEAM 188
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C++ E A +L+ MR K + +N +I G + + A +L + G +P
Sbjct: 189 CRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDT 248
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
+YT L+ G D ++ + ++ + +F + + A +L
Sbjct: 249 VSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQ 308
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
M++ G + ++ K G +D +LL GS N D + L E
Sbjct: 309 MTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAER 368
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ--- 371
D+ ++ M + P+ T+ +C + G ++ L+ Q
Sbjct: 369 WDDAKELL------------NEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSE 416
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAY 431
+G ++ Y +++ V GH + E+ + P + + L N ++D A
Sbjct: 417 HGCTVGVVTYNALVNGFCVQGHIDSALELFRSM-PCKPNTITYTTLLTGLCNAERLDGAA 475
Query: 432 RIVNTLAR 439
+V + R
Sbjct: 476 ELVAEMLR 483
Score = 53.1 bits (126), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 66/321 (20%), Positives = 124/321 (38%), Gaps = 49/321 (15%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L + S G P+ ++Y + ++ C+ + A ++L M P +E FN
Sbjct: 340 LLNDMGSYGCNPDTISY------TTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNT 393
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL--KP 222
I Q + A ++ MS+ G TY L+ G+ G +DS S+ KP
Sbjct: 394 FICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP 453
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+ + L N + + A ++ M + P+ T+ L+ + + G ++
Sbjct: 454 NTITYTTLLTGLCN-----AERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEE 508
Query: 283 VRRLLAQ-----------SGSSLVNG--------DYLDIIHALAVSGHGEYIDEVSAIVC 323
L+ Q + ++L++G D L+++H L G + S+I+
Sbjct: 509 AIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIG 568
Query: 324 FVNI---------CFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---Q 371
++ FH ++ G+ P A Y K++ G K ++D+ A
Sbjct: 569 ILSKEDRIEEAVQLFH-----VVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVS 623
Query: 372 NGSSLVNGDYLDIIHALAVSG 392
NG Y+ +I LA G
Sbjct: 624 NGCMPNESTYIILIEGLAHEG 644
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 124/323 (38%), Gaps = 26/323 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y LL+ ++ + A++ + PN VT+ LI +C+ G +E
Sbjct: 247 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIR------FFCRGGMVE 300
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++LE M + + + N +I + + A +L M G P +YT ++
Sbjct: 301 RAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVL 360
Query: 202 CGYAKHGDMDSIKTKIPSL----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
G + D K + + P +E+ +F ++ + A ++ MS+
Sbjct: 361 KGLCRAERWDDAKELLNEMVRNNCPPNEV----TFNTFICILCQKGLIEQAIMLIEQMSE 416
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA----VSGHGE 313
G TY L+ G+ G +DS L Y ++ L + G E
Sbjct: 417 HGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAE 476
Query: 314 YIDEVSAIVCFVNIC-FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLL 369
+ E+ C N+ F+ L + LE + + ++M +HG ++ + LL
Sbjct: 477 LVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMM----EHGCTPNLITYNTLL 532
Query: 370 AQNGSSLVNGDYLDIIHALAVSG 392
+ D L+++H L G
Sbjct: 533 DGITKDCSSEDALELLHGLVSKG 555
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 59/135 (43%), Gaps = 6/135 (4%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D P ++ +N L+ + + + ++ G PN +TY L+ I+K C
Sbjct: 485 DCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDG---ITKDCSS 541
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
E A ++L + K F+++I S+ + + A + ++ G+ P A Y
Sbjct: 542 ---EDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVY 598
Query: 198 TKLMCGYAKHGDMDS 212
K++ G K ++D+
Sbjct: 599 NKILLGLCKRCEIDN 613
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 666
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 155/385 (40%), Gaps = 41/385 (10%)
Query: 76 ELDVPLDISHYNALL-RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
E + D+ Y+A++ R+ D H+ + F LE +GI PN TY +I +
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDG------F 341
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C G A ++L M ++ FNALI + + AE + M + P
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY ++ G+ KH D K + + +F + + + +L
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
+S+ GL + TY L+ G+ + ++++ + L + S V D + L E
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 315 IDEVSAIVCFV------------NICFHWL-EGPMMSQA----------GLEPSAQTYTK 351
++E + + NI H + +G + +A G+EP QTY
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 352 LM---CGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGV 408
++ CG + D + + + NG N Y +I +G + E+IS+++
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN- 636
Query: 409 GYSADA--ANHIYHLINKGQIDAAY 431
G+S DA + LI G++D ++
Sbjct: 637 GFSGDAFTIKMVADLITDGRLDKSF 661
>gi|87162841|gb|ABD28636.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1053
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 39/217 (17%)
Query: 95 DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT 154
D E +F+ FLAK+ +GI PN+VTY + ++S YC+ G IE A + M+D
Sbjct: 266 DVEKSFT---FLAKMIKEGIIPNKVTY------TAIMSAYCKKGRIEEAFGLFVRMKDMG 316
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG------ 208
+ E VF LI G + D +L M + G+ P+ TY ++ G +K+G
Sbjct: 317 IELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEKRGIGPNVVTYNAVVNGLSKYGRTQEAD 376
Query: 209 ---------------------DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
+ D++ + + K E + + N+LI M +
Sbjct: 377 EFSKNVTADVVTYSTLLHGYTEEDNVLGILQTKKRLEEAGISMDVVMCNVLIRALFMMQA 436
Query: 248 AEGILTM---MSQAGLEPSAQTYTKLMCGYAKHGDMD 281
E + + M + L P++ TY ++ GY K G ++
Sbjct: 437 YEDVYALYKGMPEMDLVPNSITYCTMIDGYCKVGKIN 473
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/228 (18%), Positives = 84/228 (36%), Gaps = 6/228 (2%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D+P+ Y ++ + D +E +G+ N V Y +I+ C D
Sbjct: 692 DLPVMYVDYGVVIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIING------LCHD 745
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G + A ++ + + SE + LIY + + AE + M G +P Q Y
Sbjct: 746 GCLIEAFRLFDSLEKLNLMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVY 805
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
L+ +K G ++ + ++ Q F F+ DM A
Sbjct: 806 NSLLVATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKG 865
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHA 305
+ P + ++ G G M+ R +L + S + ++I+++
Sbjct: 866 KDISPDFLGFLYMIRGLCTKGRMEETRSVLREMLQSKNVAEMINIVNS 913
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 90/212 (42%), Gaps = 13/212 (6%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G PN VTY + +++ C+ G ++ ++ M + + +++ + G+ +
Sbjct: 176 GSRPNLVTY------TAVVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVWVCGYVEE 229
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+ + M + G+ +YT L+ G++K GD++ T + + + + ++
Sbjct: 230 KVLVEVFRKMREMVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTY 289
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS-- 290
+ A G+ M G+E + L+ G+ + GD D V +LL +
Sbjct: 290 TAIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEK 349
Query: 291 ---GSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
G ++V Y +++ L+ G + DE S
Sbjct: 350 RGIGPNVVT--YNAVVNGLSKYGRTQEADEFS 379
>gi|222618027|gb|EEE54159.1| hypothetical protein OsJ_00969 [Oryza sativa Japonica Group]
Length = 610
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 86/211 (40%), Gaps = 42/211 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQ-GIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ YN L Y N+ T+ + + ++ Q G+ + T+ ++ YC++G +
Sbjct: 259 DVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERTW------GIIVGGYCREGRL 312
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A + + M+D + VFN L+ G ANDMA+ + +L +M Q G++P TY
Sbjct: 313 GEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTY--- 369
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
S QL L + MA + M +AG+
Sbjct: 370 ------------------------------SHQLNALSSM--GHMAKCMKVFDKMIEAGI 397
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
EP Q Y+ L GY + + LL Q G
Sbjct: 398 EPDPQVYSILAKGYVRAQQPEKAEELLRQMG 428
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 109/297 (36%), Gaps = 60/297 (20%)
Query: 84 SHYNALLRVY------LDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
S +N L++ Y +++ F + PN TY + L+ +C
Sbjct: 185 STFNTLIKGYGIAGRPEESQRVFDMMASGGAGGEAAVRPNLTTY------NILVKAWCDA 238
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEG-ILTMMSQAGLEPSAQT 196
G +E A +++ MR +N L +++ ++ AE ++ M QAGL S +T
Sbjct: 239 GRLEEAWRVVARMRASGADPDVVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERT 298
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
+ ++ GY + G + + +K L F L ++DMA+ + +L +M
Sbjct: 299 WGIIVGGYCREGRLGEALRCVRQMKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLME 358
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
Q G++P TY+ + + G M ++ +
Sbjct: 359 QFGIKPDIVTYSHQLNALSSMGHMAKCMKVFDK--------------------------- 391
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
M +AG+EP Q Y+ L GY + + LL Q G
Sbjct: 392 --------------------MIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMG 428
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 129/353 (36%), Gaps = 37/353 (10%)
Query: 90 LRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEF 149
+R +D L G P+ VTY L++ L S+ D +L
Sbjct: 86 MRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLA--ALTSQRAFDT----IPWLLAE 139
Query: 150 MRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG- 208
+ D FNALI +A M A M +G P+A T+ L+ GY G
Sbjct: 140 VEDAGLRPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGR 199
Query: 209 --DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD---MASAEGILTMMSQAGLEPS 263
+ + + S E + + N+L+ D + A ++ M +G +P
Sbjct: 200 PEESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPD 259
Query: 264 AQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
TY L YAK+ + L +AQ + II V G+ A
Sbjct: 260 VVTYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGII----VGGYCREGRLGEA 315
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM---DSIRRLLAQNGSSLV 377
+ C M +G+ P+ + L+ G+ DM D + L+ Q G
Sbjct: 316 LRCVRQ----------MKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPD 365
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISK-IQPGVGYSADAANHIYHLINKGQIDA 429
Y ++AL+ GH ++ K I+ G+ + +Y ++ KG + A
Sbjct: 366 IVTYSHQLNALSSMGHMAKCMKVFDKMIEAGI----EPDPQVYSILAKGYVRA 414
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I Y+AL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPNVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCN-----AEKMSEARS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M + P+ + + +L+ K G++D+ +L
Sbjct: 277 ILKEMLDKYIAPTDNSIFMRLISSQCKAGNLDAAADVL 314
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDXDMWVLMIDSYGKAG---IVQESVKLFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + + L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D I + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--ITYNTMINGYYRVKKMEEAEKYFVE----------MKGKNIEPNVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEE 245
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 67/162 (41%), Gaps = 4/162 (2%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G ++ + K+ + M + + ++AL + A+ M G
Sbjct: 86 MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
AE M +EP+ TYT L+ GY +D RL+ +
Sbjct: 204 AEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVEE 245
>gi|255660900|gb|ACU25619.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 481
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTXINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDXALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMSEARV 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ + G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSHCXSGNLDAAADVL 314
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 81/204 (39%), Gaps = 18/204 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKZG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTXINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT L+ GY +D RL+ +
Sbjct: 222 TYTTLIKGYVSVDQVDXALRLVEE 245
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 79/440 (17%), Positives = 159/440 (36%), Gaps = 86/440 (19%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKZGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTXINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ +
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDXALRLVEE------------------ 245
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
M G++P+A TY+ L+ G M R
Sbjct: 246 -----------------------------MKGFGIKPNAITYSTLLPGLCNAEKMSEARV 276
Query: 368 LLAQNGSSLV----NGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYH 420
+L + + N ++ +I + SG+ + +++ K + +A ++ I +
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSHCXSGNLDAAADVL-KAMXRLSVPTEAGHYGVLIEN 335
Query: 421 LINKGQIDAAYRIVNTLARSANI----------------------NGEQLPVGGFLVRHM 458
GQ D A ++++ L I N Q LVR +
Sbjct: 336 FCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPXIEYLCNNGQAXKAETLVRQL 395
Query: 459 VKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVK 518
+K GV I +G D+A+ ++ + R ++ E+ LV+ +K
Sbjct: 396 MKL---GVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRR-KVDSEKSAYNS-LVQSYLK 450
Query: 519 TNQPIDKVLAVCHRLTDENL 538
N+P D A+ + +++L
Sbjct: 451 KNEPXDAKAALDSMIENDHL 470
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 127/353 (35%), Gaps = 53/353 (15%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN--------------- 127
I YN+LL + + + +G EP+ VTY +IS
Sbjct: 78 IYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLF 137
Query: 128 ---------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
+ LI+ C+D NIE A K+LE M K + +N ++ G +
Sbjct: 138 HKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRM 197
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
++ A+ M G P Y L+ K G D + + + ++
Sbjct: 198 GKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTY 257
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
L + S+M AE + M +G P+ TY+ ++ G+ + +D ++L +
Sbjct: 258 NSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSK 317
Query: 293 ---------------SLVNGDYLDIIHAL--AVSGHGEYIDEVSAIVCFVNIC----FH- 330
L + +D H L + +G D VS V +C H
Sbjct: 318 IGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHD 377
Query: 331 -WLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL 382
+ M + L P T+ LM G K G +D + LL Q S DY+
Sbjct: 378 ARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYV 430
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 92/258 (35%), Gaps = 60/258 (23%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
PNR T++ ++ + +C+ G + K+ E M D +N LI G+++ +
Sbjct: 6 PNRYTFRVVLKS------FCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRV 59
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT 235
A + M GLEPS TY L+ + K M K ELF
Sbjct: 60 DEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKM----------KEAMELF-------- 101
Query: 236 NLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL----AQSG 291
M++ G EP TY+ ++ G K G + +L + G
Sbjct: 102 -----------------KTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERG 144
Query: 292 SSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
S Y +I+ L E I+ + LE M+ G P TY
Sbjct: 145 CSANTVAYNALINGLC---KDENIERA----------YKLLEE--MASKGYVPDNITYNT 189
Query: 352 LMCGYAKHGDMDSIRRLL 369
++ G + G + ++
Sbjct: 190 ILSGLCRMGKVSEAKQFF 207
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 6/219 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN LL T + ++G P+ VTY NS L+ + N++
Sbjct: 218 DVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTY-----NSILLG-LARKSNMD 271
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + M + ++ ++ GH +A + A +L MS+ G P TY L+
Sbjct: 272 EAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILL 331
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K +D ++ S+ + + ++ + A + M + L
Sbjct: 332 DGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLV 391
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL 300
P T+ LM G K G +D + LL Q S DY+
Sbjct: 392 PDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYV 430
Score = 46.2 bits (108), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 127/338 (37%), Gaps = 59/338 (17%)
Query: 85 HYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL-------------------- 124
YN L+ Y ++ S G+EP+ TY L
Sbjct: 45 EYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTM 104
Query: 125 ---------ISNSKLISKYCQDGNIEGATKIL-EFMRDKTFPISEGVFNALIYGHSQAND 174
++ S +IS C+ G + A ++L M ++ + +NALI G + +
Sbjct: 105 AEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDEN 164
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSF 232
+ A +L M+ G P TY ++ G + G + K S+ + S + ++
Sbjct: 165 IERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNG 224
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
L L +D A + + G P TY ++ G A+ +MD + + +
Sbjct: 225 LLDALYKEGKTD--EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVA 282
Query: 293 SLV--NGDYLDIIHALAVSGH--GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
S NG +++ +SGH + +D+ ++ MS+ G P T
Sbjct: 283 SGCAPNG----ATYSIVLSGHCRAKKVDDAHKVL------------EEMSKIGAVPDVVT 326
Query: 349 YTKLMCGYAKHGDMDSIRRLLAQNGSSLV-NGDYLDII 385
Y L+ G K +D L S++V NG DI+
Sbjct: 327 YNILLDGLCKTNLVDKAHELF----STMVDNGCAPDIV 360
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 7/156 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D+ YN LL + + + G P+ V+Y S +++ C+
Sbjct: 321 VP-DVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY------SVVLNGLCKTN 373
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A + + M ++ FN L+ G +A + A+ +L M+ +G P Y
Sbjct: 374 KVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYN 433
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234
LM G K G ++K + L CF L
Sbjct: 434 TLMNGLRKQGRHIQADRLTQAMKEKGFLSDCFKAPL 469
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 155/385 (40%), Gaps = 41/385 (10%)
Query: 76 ELDVPLDISHYNALL-RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
E + D+ Y+A++ R+ D H+ + F LE +GI PN TY +I +
Sbjct: 284 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDG------F 336
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C G A ++L M ++ FNALI + + AE + M + P
Sbjct: 337 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 396
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY ++ G+ KH D K + + +F + + + +L
Sbjct: 397 VTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRVDEGMQLLRE 452
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
+S+ GL + TY L+ G+ + ++++ + L + S V D + L E
Sbjct: 453 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 512
Query: 315 IDEVSAIVCFV------------NICFHWL-EGPMMSQA----------GLEPSAQTYTK 351
++E + + NI H + +G + +A G+EP QTY
Sbjct: 513 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 572
Query: 352 LM---CGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGV 408
++ CG + D + + + NG N Y +I +G + E+IS+++
Sbjct: 573 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN- 631
Query: 409 GYSADA--ANHIYHLINKGQIDAAY 431
G+S DA + LI G++D ++
Sbjct: 632 GFSGDAFTIKMVADLITDGRLDKSF 656
>gi|297837243|ref|XP_002886503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332344|gb|EFH62762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 408
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 16/213 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN +++V+ ++ S +A++E +GI+PN ++ +IS Y +D N E
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGF-----YSEDKNDE 240
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
K+L M+D+ I +N I + A+ +L M AG++P+ TY+ L+
Sbjct: 241 -VGKVLVMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
G+ D + K + KP SE + + L D +A +
Sbjct: 300 RGFCNEDDFEEAKKLFKVMVNRGCKPDSECYFTLIYYLCK-----GGDFETALVLCKESM 354
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ PS L+ G AK +D + L+ Q
Sbjct: 355 EKNWVPSFSIMKSLVNGLAKDSKVDEAKELIGQ 387
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V + +S YN ++ + + L + S G++PN VTY S LI +C +
Sbjct: 253 VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTY------SHLIRGFCNED 306
Query: 139 NIEGATKILEFMRDK-TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+ E A K+ + M ++ P SE F LIY + D +A + + PS
Sbjct: 307 DFEEAKKLFKVMVNRGCKPDSECYF-TLIYYLCKGGDFETALVLCKESMEKNWVPSFSIM 365
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQ 223
L+ G AK +D K I +K +
Sbjct: 366 KSLVNGLAKDSKVDEAKELIGQVKEK 391
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 44/236 (18%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
E V D + YN L+ + + L ++ Q ++P++ Y + LI +
Sbjct: 513 AERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVY------TTLIDGF 566
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ + A KI EFM +K +NA+I G+ ++ M A ++ M + G P
Sbjct: 567 IRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDE 626
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TYT L+ GYAK GD+ + +L+ FLC M
Sbjct: 627 FTYTTLIDGYAKKGDIKA------ALR-----FLC-----------------------DM 652
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
M + +P+ TY L+CGY G+ DS L A S G + +++H + G
Sbjct: 653 MKRR-CKPNIVTYASLICGYCNIGNTDSAEVLFASMQS---EGLFPNVVHYTVLIG 704
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 134/358 (37%), Gaps = 67/358 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ + +D L ++ +G P+ VT LI + ++S G ++ A
Sbjct: 454 YTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALI-HGLVVS-----GQVDEALM 507
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M ++ ++N LI G + +++A+ +L M + ++P YT L+ G+
Sbjct: 508 VREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFI 567
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ + + ++ + ++ S M A ++ M + G P
Sbjct: 568 RSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEF 627
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
TYT L+ GYAK GD+ + R L
Sbjct: 628 TYTTLIDGYAKKGDIKAALRFLCD------------------------------------ 651
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDII 385
M + +P+ TY L+CGY G+ DS L A S G + +++
Sbjct: 652 -----------MMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQS---EGLFPNVV 697
Query: 386 HALAVSGHGEYIDEIISKIQPGVGYSADAANH-------IYHLINKGQIDAAYRIVNT 436
H + G D+ IQ + NH +++L+N G + Y ++N+
Sbjct: 698 HYTVLIGSLFKKDK---AIQAAAYFEHMLLNHCSPNDATMHYLVN-GLTNCRYGMINS 751
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 17/259 (6%)
Query: 121 YQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEG 180
Y+ +++ + +I YC+ G + A + MR E + LI G+++ D+ +A
Sbjct: 588 YRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALR 647
Query: 181 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL-I 239
L M + +P+ TY L+CGY G+ DS + S+ QSE T L+
Sbjct: 648 FLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASM--QSEGLFPNVVHYTVLIGS 705
Query: 240 LVSSDMA-SAEGILTMMSQAGLEPSAQTYTKLMCGY--AKHGDMDSVRRLLAQSGSSLVN 296
L D A A M P+ T L+ G ++G ++S + + +
Sbjct: 706 LFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSN---CSDTDQAHKK 762
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM------MSQAGLEPSAQTYT 350
LD+ L G I +AI+ ++C H + G MS G P T+
Sbjct: 763 SALLDVFKGLISDGLDPRISAYNAII--FSLCRHNMLGKAMELKEKMSNKGCLPDPVTFL 820
Query: 351 KLMCGYAKHGDMDSIRRLL 369
L+ G++ G R L
Sbjct: 821 SLLYGFSSVGKSGKWRSAL 839
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 136/354 (38%), Gaps = 65/354 (18%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
GE VP + YN L+ Y L ++E +GI P VTY +I
Sbjct: 304 GEGCVPGAV-FYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTY------GAIIHWL 356
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ ++ +L M+++ + ++N +IY + + A +L M + +P
Sbjct: 357 GRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDV 416
Query: 195 QTYTKLMCGYAKHGDM--------DSIKTKI-PSLKPQSELFLCFSFQ-----LTNLLI- 239
T+ L+ + + GD+ ++I+ ++ P+ + L F + ++LL+
Sbjct: 417 VTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVE 476
Query: 240 --------------------LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
+VS + A + M++ + P A Y L+ G K
Sbjct: 477 MIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRM 536
Query: 280 MDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH-------GEYIDEVSA---IVCFVN 326
+ + + LL + V D Y +I S E+++E IV +
Sbjct: 537 LSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNA 596
Query: 327 ICFHWLEGPMMSQA----------GLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+ + + MM++A G P TYT L+ GYAK GD+ + R L
Sbjct: 597 MIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLC 650
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 100/266 (37%), Gaps = 30/266 (11%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G P V Y LI YC+ G++ +L M K + + A+I+ +
Sbjct: 305 EGCVPGAVFYNVLIDG------YCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGR 358
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
+D+ E +L M + GL P+ Q Y ++ K S + L
Sbjct: 359 KSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCK---CRSASQALAVLNQMVASRFDPD 415
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQA---GLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
N LI E L ++ +A LEP+ +YT L+ G+ G++ LL
Sbjct: 416 VVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLV 475
Query: 289 QSGSSLVNGDYLD---IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ D + +IH L VSG +DE + M++ + P
Sbjct: 476 EMIGRGHTPDVVTLGALIHGLVVSGQ---VDEALMV------------REKMAERQVMPD 520
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQ 371
A Y L+ G K + + + LL +
Sbjct: 521 ANIYNVLISGLCKKRMLSAAKNLLVE 546
>gi|357449533|ref|XP_003595043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484091|gb|AES65294.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1070
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 39/217 (17%)
Query: 95 DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT 154
D E +F+ FLAK+ +GI PN+VTY + ++S YC+ G IE A + M+D
Sbjct: 283 DVEKSFT---FLAKMIKEGIIPNKVTY------TAIMSAYCKKGRIEEAFGLFVRMKDMG 333
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG------ 208
+ E VF LI G + D +L M + G+ P+ TY ++ G +K+G
Sbjct: 334 IELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEKRGIGPNVVTYNAVVNGLSKYGRTQEAD 393
Query: 209 ---------------------DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
+ D++ + + K E + + N+LI M +
Sbjct: 394 EFSKNVTADVVTYSTLLHGYTEEDNVLGILQTKKRLEEAGISMDVVMCNVLIRALFMMQA 453
Query: 248 AEGILTM---MSQAGLEPSAQTYTKLMCGYAKHGDMD 281
E + + M + L P++ TY ++ GY K G ++
Sbjct: 454 YEDVYALYKGMPEMDLVPNSITYCTMIDGYCKVGKIN 490
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/228 (18%), Positives = 84/228 (36%), Gaps = 6/228 (2%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D+P+ Y ++ + D +E +G+ N V Y +I+ C D
Sbjct: 709 DLPVMYVDYGVVIHGLCKGGYLNKALDLCTLIEKKGVNLNIVIYNSIING------LCHD 762
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G + A ++ + + SE + LIY + + AE + M G +P Q Y
Sbjct: 763 GCLIEAFRLFDSLEKLNLMTSEITYATLIYALCREGYLQDAEHVFKKMVLNGFQPKTQVY 822
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
L+ +K G ++ + ++ Q F F+ DM A
Sbjct: 823 NSLLVATSKIGQLEKAFELLNDMEKQYIKFDNFTVSSVINCYCQKGDMEGALEFYYKFKG 882
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHA 305
+ P + ++ G G M+ R +L + S + ++I+++
Sbjct: 883 KDISPDFLGFLYMIRGLCTKGRMEETRSVLREMLQSKNVAEMINIVNS 930
Score = 44.7 bits (104), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 90/212 (42%), Gaps = 13/212 (6%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G PN VTY + +++ C+ G ++ ++ M + + +++ + G+ +
Sbjct: 193 GSRPNLVTY------TAVVNALCKLGRVDEVCGLVRKMEEDGLDLDVVLYSVWVCGYVEE 246
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+ + M + G+ +YT L+ G++K GD++ T + + + + ++
Sbjct: 247 KVLVEVFRKMREMVEKGICHDFVSYTILIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTY 306
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS-- 290
+ A G+ M G+E + L+ G+ + GD D V +LL +
Sbjct: 307 TAIMSAYCKKGRIEEAFGLFVRMKDMGIELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEK 366
Query: 291 ---GSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
G ++V Y +++ L+ G + DE S
Sbjct: 367 RGIGPNVVT--YNAVVNGLSKYGRTQEADEFS 396
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 137/363 (37%), Gaps = 27/363 (7%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
+DI Y A++ N+ + K+ + G P TY L++ C+ G +
Sbjct: 257 IDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNG------LCKMGRL 310
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A +L + D + +LI G + A + M+ GL YT L
Sbjct: 311 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTAL 370
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ G + G + + ++ + + + + + +A I M GL
Sbjct: 371 IRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGL 430
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
P+ Y+ L+ G K MD +LAQ + D Y +I L SG +
Sbjct: 431 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG------D 484
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
V A F + M +AG +P TY L+ G K G+ D+ +L SS
Sbjct: 485 VEAARAFFD---------EMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF 535
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISKIQ-PGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
Y ++ L SG E + +++ GV S I+HL ++D A + N
Sbjct: 536 V--YSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNA 593
Query: 437 LAR 439
+ +
Sbjct: 594 IRK 596
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 172/462 (37%), Gaps = 64/462 (13%)
Query: 82 DISHYNALLRVYL---DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
D+ +N L+ Y + E F+ + E G+ P+ T+ ++ C+ G
Sbjct: 153 DVETWNVLITGYCLAREPEEAFAVIREME--EDFGVAPSLKTHNLVLHG------LCKSG 204
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A E +R ++ P+S F+ LI G +A M A + + G TYT
Sbjct: 205 KVLAAMDHFEAVR-RSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYT 263
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
++ AK+ I+ + ++ + + N L+ M E + ++ +
Sbjct: 264 AIVNWLAKN---KKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 320
Query: 259 ---GLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSG-- 310
G P TYT L+ G K +L +A G +L Y +I L +G
Sbjct: 321 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKI 380
Query: 311 ------------HGEYIDEVSAIVCFVNICFHWLEGPM------MSQAGLEPSAQTYTKL 352
HG D V+ + G M GL P+ Y+ L
Sbjct: 381 PQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 440
Query: 353 MCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGE----YIDEII-SKI 404
+ G K MD +LAQ + D Y +I L SG E + DE++ +
Sbjct: 441 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGC 500
Query: 405 QPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANI---------NGEQLPVGGFLV 455
+P V Y+ + I L G DAA +++ ++ S + +L G L
Sbjct: 501 KPDV-YTYNIL--ISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLF 557
Query: 456 RHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLAR 497
M ++ GV S I+HL ++D A + N + +
Sbjct: 558 HEMERS---GVANSQTRTRLIFHLCKANRVDEAVSLFNAIRK 596
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 105/266 (39%), Gaps = 18/266 (6%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L L G+ P Y LI+ YCQ +++GA I E M+ + +NAL
Sbjct: 358 LEMLVHTGLVPTTAIYNTLING------YCQVRDLQGAFSIFEQMKSRHIRPDHITYNAL 411
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I G + + AE ++ M ++G++PS +T+ L+ Y + G ++ T + ++ +
Sbjct: 412 INGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGI 471
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
SF + + A IL M + P+AQ Y ++ Y + G +
Sbjct: 472 KSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFL 531
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
L+ + SS V+ L IDE ++ ++ GL P
Sbjct: 532 LVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIY------------NLTNQGLRPD 579
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+Y ++ GD D LL +
Sbjct: 580 VVSYNTIISACCNKGDTDRALELLQE 605
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 167/411 (40%), Gaps = 34/411 (8%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P D YN ++ + ++ +G+ PN++TY +I + + G+
Sbjct: 192 PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDG------HVKGGD 245
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+E ++ + M + +N L+ G +A M ++ M+ + P TY+
Sbjct: 246 LEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSI 305
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L G + GD ++ + + + ++ + + +A AE +L M+ G
Sbjct: 306 LFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTG 365
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG--HGEYIDE 317
L P+ Y L+ GY + D+ + Q S + D+ I + ++G E I E
Sbjct: 366 LVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDH--ITYNALINGLCKMEMITE 423
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
+V +E M ++G++PS +T+ L+ Y + G ++ +L+ +
Sbjct: 424 AEDLV---------ME---MEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGI 471
Query: 378 NGDYL---DIIHALAVSGH-GEYIDEIISKIQPGVGYSADAANHIYH-LINKGQIDAAYR 432
+ + ++ A +G E + + I V +A N I I G + A+
Sbjct: 472 KSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFL 531
Query: 433 IVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKG 483
+V + +S+ ++ L++ + K +Q +A IY+L N+G
Sbjct: 532 LVEKM-KSSGVSASIFTY-NLLLKGLCKNSQID-----EAEELIYNLTNQG 575
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 85/204 (41%), Gaps = 6/204 (2%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNAL+ E D + ++E G++P+ T+ + LI Y + G +E
Sbjct: 408 YNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETF------NTLIDAYGRAGQLEKCFT 461
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M+DK + F +++ + + A IL M + P+AQ Y ++ Y
Sbjct: 462 VLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYI 521
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G + + +K F++ L + +S + AE ++ ++ GL P
Sbjct: 522 ESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVV 581
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ 289
+Y ++ GD D LL +
Sbjct: 582 SYNTIISACCNKGDTDRALELLQE 605
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 91/464 (19%), Positives = 180/464 (38%), Gaps = 87/464 (18%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I+ + G A K+ + M D+ ++ +N +I GH + D+ + + M Q G
Sbjct: 201 VIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDG 260
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+P+ TY L+ G + G MD +
Sbjct: 261 RKPNVVTYNVLLSGLCRAGRMDETR----------------------------------- 285
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD------II 303
++ M+ + P TY+ L G + GD R +L+ G SL G + ++
Sbjct: 286 ALMDEMTSYSMLPDGFTYSILFDGLTRTGD---SRTMLSLFGESLKKGVIIGAYTCSILL 342
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+ L G ++V LE M+ GL P+ Y L+ GY + D+
Sbjct: 343 NGLCKDGKVAKAEQV-------------LE--MLVHTGLVPTTAIYNTLINGYCQVRDLQ 387
Query: 364 SIRRLLAQNGSSLVNGDYLD---IIHALA-VSGHGEYIDEIISKIQPGVGYSADAANHIY 419
+ Q S + D++ +I+ L + E D ++ + GV S + N +
Sbjct: 388 GAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLI 447
Query: 420 HLINK-GQIDAAYRIVN---------------TLARSANINGEQLPVGGFLVRHMVKTNQ 463
+ GQ++ + +++ ++ ++ NG ++P ++ M+ +
Sbjct: 448 DAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNG-KIPEAVAILDDMIHKD- 505
Query: 464 PGVGYSADAANHIYH-LINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQP 522
V +A N I I G + A+ +V + +S+ ++ L++ + K +Q
Sbjct: 506 --VVPNAQVYNSIIDAYIESGGTEQAFLLVEKM-KSSGVSASIFTYN-LLLKGLCKNSQ- 560
Query: 523 IDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFE 566
ID+ + + LT++ L P + +I A K D A+E +
Sbjct: 561 IDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQ 604
>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Glycine max]
Length = 587
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 127/300 (42%), Gaps = 34/300 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ LDI YN+L+ + + E + PN VTY + LI YC+
Sbjct: 262 INLDIVSYNSLIYGFCKEGRMREAMRMFS--EIKNATPNHVTY------TTLIDGYCKTN 313
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A K+ + M K +N+++ Q + A +L MS+ L+ T
Sbjct: 314 ELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCN 373
Query: 199 KLMCGYAKHGDMDS---IKTKI--PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
L+ Y K GD+ S K K+ LKP F+++ ++++ SA+ ++
Sbjct: 374 TLINAYCKIGDLKSALKFKNKMLEAGLKPDP-----FTYKALIHGFCKTNELESAKELMF 428
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD--IIHALAVSGH 311
M AG PS TY+ ++ GY K +MD+V LA L G LD + AL S
Sbjct: 429 SMLDAGFTPSYCTYSWIVDGYNKKDNMDAV---LALPDEFLSRGICLDVSVYRALIRSS- 484
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+V I C + +H +EG G+ + YT + Y G++ + +L +
Sbjct: 485 ----CKVERIQCAERLFYH-MEGK-----GISGESVIYTSIAYAYWNVGNVSAASSMLEE 534
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 124/312 (39%), Gaps = 36/312 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP +I YN L + L +++ +G+ + TY + L+S YC+ G
Sbjct: 193 VP-NIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTY------NTLLSLYCKKG 245
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
A I M + + +N+LIYG + M A + + + A P+ TYT
Sbjct: 246 MHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNA--TPNHVTYT 303
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELF---LCFSFQLTNLLILVSSDMASAEGILTMM 255
L+ GY K +++ K+ L L+ + ++ L L + A +L M
Sbjct: 304 TLIDGYCKTNELEE-ALKMCKLMEAKGLYPGVVTYNSILRKL--CQDGRIRDANKLLNEM 360
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHG 312
S+ L+ T L+ Y K GD+ S + + + + D Y +IH +
Sbjct: 361 SERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNEL 420
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
E E+ M AG PS TY+ ++ GY K +MD++ LA
Sbjct: 421 ESAKELMF---------------SMLDAGFTPSYCTYSWIVDGYNKKDNMDAV---LALP 462
Query: 373 GSSLVNGDYLDI 384
L G LD+
Sbjct: 463 DEFLSRGICLDV 474
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%), Gaps = 43/305 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ L PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + QS+++ +S + L +S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQSDVY-TYSVLINGL--CKASKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+ +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
MS GL+P TYT L+ G K GD+++ R+ + + L + Y
Sbjct: 302 ------------MSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 382 LDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
+I L G + + E++S ++P +G N KG + +++
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCEKGDVWTGLKLLKE 406
Query: 437 LARSA 441
+ R
Sbjct: 407 MQRDG 411
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 112/254 (44%), Gaps = 25/254 (9%)
Query: 51 SKWCSEPSLGPGNLPCEDPFSVHTGELD-------------VPLDISHYNALLRVYLDNE 97
+KW PS+ N + G+LD V D+ Y+ L+
Sbjct: 163 TKWSLRPSVVSFNTLMNG--YIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKAS 220
Query: 98 HTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPI 157
+ ++ G+ PN VT+ + LI +C++ ++ A +I + M ++
Sbjct: 221 KMDDANELFDEMLDNGLVPNGVTF------TTLIDGHCKNRRVDVAMEIYKQMLSQSLSP 274
Query: 158 SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-IKTK 216
+N LIYG + D+ A+ ++ MS GL+P TYT L+ G K GD+++ + +
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYR 334
Query: 217 IPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
+K L + ++ ++ L S AE +L M GL+P TYT ++ +
Sbjct: 335 KRMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLSVGLKPEIGTYTMIINEFC 392
Query: 276 KHGDMDSVRRLLAQ 289
+ GD+ + +LL +
Sbjct: 393 EKGDVWTGLKLLKE 406
>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
Length = 689
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 148/371 (39%), Gaps = 31/371 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V ++ YNA+L V L + ++++ G+ +R ++ + +I+ YC+ G
Sbjct: 268 VAMNTHVYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSF------NTVIALYCRKG 321
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
A + E M ++ +N+LI+G + + A +L M+ AG+ P TYT
Sbjct: 322 MQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYT 381
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ GY + GD++ ++ L ++ + M +L M +
Sbjct: 382 TLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDER 441
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
++ T L+ Y K GDM S V+R + +SG L Y ++H + +
Sbjct: 442 KVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFC---KAKEL 498
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQN 372
DE + F M AG P+ + ++ G + ++ + L +
Sbjct: 499 DEAKEAL------FE------MMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKR 546
Query: 373 GSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADA---ANHIYHLINKGQIDA 429
G Y +I L G + + +++Q G G AD A + G+ A
Sbjct: 547 GFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQ-GKGLEADCLVYATLACAYLTAGKPVA 605
Query: 430 AYRIVNTLARS 440
A I+N +A+
Sbjct: 606 ALDILNEMAKK 616
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/295 (20%), Positives = 127/295 (43%), Gaps = 28/295 (9%)
Query: 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM 185
++S L++ + A K+ + M ++ V+NA+++ +A D A AE ++T M
Sbjct: 239 ASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGDAALAESLMTRM 298
Query: 186 SQAGLEPSAQTYTKLMCGYAKHG---DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
AG+ ++ ++ Y + G + ++ ++ + ++++ S +
Sbjct: 299 DAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHG---LCKE 355
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNG--DY 299
+ A +L M+ AG+ P TYT L+ GY + GD++ +L + ++ G Y
Sbjct: 356 RRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATY 415
Query: 300 LDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
I+ L G + EV+ ++ M + ++ T L+ Y K
Sbjct: 416 NAILRKLCEDGK---MKEVNVLL------------NEMDERKVQADHVTCNTLINAYCKR 460
Query: 360 GDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYS 411
GDM S ++R + ++G L Y ++H + + E + ++ G G+S
Sbjct: 461 GDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMM-GAGFS 514
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 24/223 (10%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
+ V LD+S YN L+ + T + +GI + +TY LI YC
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHG------YCI 588
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+++ A + M + + +N L+ G S A + A G++ M + GL P+A T
Sbjct: 589 SSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATT 648
Query: 197 YTKLMCGYAKHGDMDSI---------KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
Y L+ G+ K G+M K +P + + L CF+ M+
Sbjct: 649 YDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFA---------KGKKMSQ 699
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
A+ ++ M G+ P++ TY L+CG+ K + + L +S
Sbjct: 700 AKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 102/261 (39%), Gaps = 73/261 (27%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+L G++ + TY LIS +C+ G I AT + + M K +NALI+
Sbjct: 531 QLVGMGVKLDLSTYNTLIST------FCRLGMIRRATLVFKDMMGKGILADIITYNALIH 584
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G+ ++ + A + + M G+ P+ +TY L+ G +
Sbjct: 585 GYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLS---------------------- 622
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + A G++ M + GL P+A TY L+ G+ K G+M +L
Sbjct: 623 -------------AARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL- 668
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA------- 340
Y ++I V Y +S CF +G MSQA
Sbjct: 669 -----------YCEMITKGFVPKTRTYNVLIS---CFA-------KGKKMSQAKELMQEM 707
Query: 341 ---GLEPSAQTYTKLMCGYAK 358
G+ P++ TY L+CG+ K
Sbjct: 708 QVRGIPPNSSTYDILICGWYK 728
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 128/302 (42%), Gaps = 28/302 (9%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
++ + H+N L+ Y N + L ++++G P+ VTY L++ +C+
Sbjct: 12 EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNG------FCKI 65
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G++ A K++ + + + LI + ++ + A + M+ L P TY
Sbjct: 66 GDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTY 125
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
T +M G K G ++ K+ ++ + FS+ + ++A A + M
Sbjct: 126 TCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVV 185
Query: 258 AGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
G+ YT LM G K G + + + ++L + SLV + ++ + GH +
Sbjct: 186 RGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLE--ESLVPN---CVTYSALIDGHCKL 240
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG----DMDSIRRLLA 370
D VN L+ M + + P+ Y+ ++ GY K G MD +R+++
Sbjct: 241 GD--------VNKGELLLQE--MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQ 290
Query: 371 QN 372
+N
Sbjct: 291 RN 292
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 120/293 (40%), Gaps = 41/293 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D+ Y ++ + ++E G+ PNR +Y + LI ++G
Sbjct: 119 VP-DVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSY------ATLIDSLFKEG 171
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A + M + V+ AL+ G +A +AE + ++ + L P+ TY+
Sbjct: 172 NVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYS 231
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS-SDMASAEGILT---- 253
L+ G+ K GD++ + + ++ + +F N+++ S D + +G+L
Sbjct: 232 ALIDGHCKLGDVNKGELLLQEME-EKHIF-------PNVIVYSSIVDGYTKKGLLNEAMD 283
Query: 254 ---MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS-SLVNGDYL--DIIHALA 307
M Q + P+ Y L+ GY K L + S L +++ ++ L
Sbjct: 284 VMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLK 343
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
SG E DE L MMS+ GL P YT +M G+ K G
Sbjct: 344 RSGRMEEADE--------------LFKDMMSR-GLLPDRVNYTSMMDGFFKAG 381
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 120/309 (38%), Gaps = 67/309 (21%)
Query: 71 SVHTG--ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNS 128
S HTG +L + D + +N ++ Y + + L +++S G++PN +T +
Sbjct: 422 SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITC------N 475
Query: 129 KLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ- 187
L+ + C G IE +L M F + A++ S++ A+ IL M Q
Sbjct: 476 ILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR---RADVILHMHDQL 532
Query: 188 --AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVS 242
G++ TY L+ + + G + + + L ++ N LI +S
Sbjct: 533 VGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITY---NALIHGYCIS 589
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI 302
S + A + + M G+ P+ +TY L+ G S RL+ ++ + LVN
Sbjct: 590 SHLKKAFAVHSQMLTEGVSPNVETYNILLGGL-------SAARLIKEA-AGLVN------ 635
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
M + GL P+A TY L+ G+ K G+M
Sbjct: 636 ---------------------------------QMKERGLVPNATTYDILVSGHGKIGNM 662
Query: 363 DSIRRLLAQ 371
+L +
Sbjct: 663 KECVKLYCE 671
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 138/331 (41%), Gaps = 30/331 (9%)
Query: 86 YNALLRVYLDNEHTFSP-TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI-EGA 143
YN +L VY ++ T +++ GI P+ TY LI+ C+ G++ E A
Sbjct: 71 YNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLIT-------CCRRGSLYEEA 123
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+ E M+ F + +N L+ + ++ + A +L M G PS TY L+
Sbjct: 124 AAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISA 183
Query: 204 YAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
YA+ G ++ +K ++ + ++F ++ L+ + D SA + M AG
Sbjct: 184 YARDGLLEEAMELKNQMVERGIKLDVFT-YTAMLSG-FVRTGKD-ESAMRVFEEMRTAGC 240
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
+P+ T+ L+ + G + ++ + D + LAV G EVS
Sbjct: 241 KPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSG 300
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD 380
+ M + G P TY L+ Y++ G D + + + + D
Sbjct: 301 VF------------KEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPD 348
Query: 381 ---YLDIIHALAVSGHGEYIDEIISKIQPGV 408
Y ++ ALA G E ++I++++Q G+
Sbjct: 349 LSTYNAVLAALARGGLWEQSEKILAEMQDGM 379
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 82/189 (43%), Gaps = 1/189 (0%)
Query: 101 SPTDFLAKLESQGIEPNRVTYQQLISN-SKLISKYCQDGNIEGATKILEFMRDKTFPISE 159
S D L + E +E R + +S + +I+ Y + + +IL FM++ F S
Sbjct: 430 SKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSL 489
Query: 160 GVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS 219
+N+L+Y HSQ+ + +E +L + G++P +Y ++ Y ++G M
Sbjct: 490 ATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSE 549
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
++ + ++ S A ++ M + G +P+ TY ++ GY K
Sbjct: 550 MRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCKLNR 609
Query: 280 MDSVRRLLA 288
D + ++
Sbjct: 610 RDDAIKFIS 618
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
++ YN+L+ ++ +E+ + L ++ ++GI+P+ ++Y +I YC++G ++
Sbjct: 489 LATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIF------AYCRNGRMKE 542
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A+ I MR+ +N + ++ + A ++ M + G +P+ TY ++
Sbjct: 543 ASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVID 602
Query: 203 GYAKHGDMDSIKTKIPSL 220
GY K D I SL
Sbjct: 603 GYCKLNRRDDAIKFISSL 620
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 108/291 (37%), Gaps = 54/291 (18%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P +++H +LL Y + + ++ S IEP+ V + L+ L++ C D
Sbjct: 382 PNELTHC-SLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLV----LVNSKC-DLL 435
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+E LE R K F NA+I + + + IL M ++G PS TY
Sbjct: 436 LEAERAFLELKR-KGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNS 494
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
LM + QSE F +E +L + G
Sbjct: 495 LM-----------------YMHSQSENF------------------ERSEEVLKEILAKG 519
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
++P +Y ++ Y ++G M + ++ S + D + +A +E
Sbjct: 520 IKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAI 579
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+VC+ M + G +P+ TY ++ GY K D + ++
Sbjct: 580 DVVCY------------MIKHGCKPNQNTYNSVIDGYCKLNRRDDAIKFIS 618
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 119/310 (38%), Gaps = 46/310 (14%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP DI +N LL V+ N + +++ G P R TY LIS Y + G
Sbjct: 276 VP-DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLIS------AYSRCG 328
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ + A + + M D +NA++ ++ +E IL M +P+ T+
Sbjct: 329 SFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHC 388
Query: 199 KLMCGYAKH---GDMDSIKTKIPS--LKPQSELFLCFSFQLTNLLILVSSD---MASAEG 250
L+ YA G M ++ +I S ++P + L L+LV+S + AE
Sbjct: 389 SLLHAYANGKEIGRMLALAEEICSGVIEPHAVLL--------KTLVLVNSKCDLLLEAER 440
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKH---GDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
+ + G P T ++ Y + + + + +SG + Y +++ +
Sbjct: 441 AFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHS 500
Query: 308 VSGHGEYIDEVSA----------IVCFVNICFHWLEGPMMSQA----------GLEPSAQ 347
S + E +EV I+ + + F + M +A GL P
Sbjct: 501 QSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVI 560
Query: 348 TYTKLMCGYA 357
TY + YA
Sbjct: 561 TYNTFVASYA 570
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 78/428 (18%), Positives = 155/428 (36%), Gaps = 75/428 (17%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI---------- 125
E + LD+ Y A+L ++ S ++ + G +PN T+ LI
Sbjct: 202 ERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFA 261
Query: 126 -------------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
+ + L++ + Q+G + + + M+ F +N LI
Sbjct: 262 EMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLI 321
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL 226
+S+ A + M G+ P TY ++ A+ G + + + ++
Sbjct: 322 SAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDG--- 378
Query: 227 FLCFSFQLTNLLIL--------VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+C +LT+ +L + +A AE I + + +EP A L+ +K
Sbjct: 379 -MCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGV----IEPHAVLLKTLVLVNSKCD 433
Query: 279 DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
+ R + + D + +A+ G + + + + I+ F M
Sbjct: 434 LLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNF------------MK 481
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYID 398
++G PS TY LM +++ + + +L + L G DII Y
Sbjct: 482 ESGFTPSLATYNSLMYMHSQSENFERSEEVLKE---ILAKGIKPDII---------SYNT 529
Query: 399 EIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANING---EQLPVGGFLV 455
I + + G A+HI+ + + + NT S + E + V +++
Sbjct: 530 VIFAYCRNG---RMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMI 586
Query: 456 RHMVKTNQ 463
+H K NQ
Sbjct: 587 KHGCKPNQ 594
>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
Length = 795
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 149/370 (40%), Gaps = 77/370 (20%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
LD+ D+ ++ Y +F+ ++E G E N V+Y L+ Y
Sbjct: 59 RLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDG------YV 112
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA-GLEPSA 194
G+IEGA +L+FM +K ++ LI G+ + + AE +L M + G+
Sbjct: 113 SLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDE 172
Query: 195 QTYTKLMCGYAKHGDM-DSIKTKIPSLKP--QSELFLCFSFQLTNLLI---LVSSDMASA 248
Y L+ GY K G M D+I+ + LK + LF+C N LI + +
Sbjct: 173 YAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVC------NSLINGYCKNGQVHEG 226
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
E +L M + L+P + +Y L+ GY + G L +++
Sbjct: 227 ERLLMCMRKLDLKPDSYSYCTLVDGYCRDG-------LSSKA------------------ 261
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIR- 366
N+C M + G+EP+ TY L+ G + GD D++R
Sbjct: 262 ----------------FNVC------DQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRL 299
Query: 367 -RLLAQNGSSLVNGDYLDIIHALAVSGHGEYI----DEIISKIQPGVGYSADAANHIYH- 420
L+ Q G + Y ++ L G D+I+++ G+ S A N + +
Sbjct: 300 WHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILAR---GINKSIYAFNTMING 356
Query: 421 LINKGQIDAA 430
L G++D A
Sbjct: 357 LCKMGEMDGA 366
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 121/305 (39%), Gaps = 61/305 (20%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGA-TKILEFMRDKTFPISEGVFNA 164
++E G +P+ +TY+ L YC+ GN+E A + +++ FP E ++N+
Sbjct: 370 FKRMEELGCKPDGITYRTLSDG------YCKVGNVEEAFKIKEKMEKEEIFPSIE-MYNS 422
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---------KT 215
LI G + ++ +L M GL P+ TY L+ G+ G +D K
Sbjct: 423 LIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKG 482
Query: 216 KIPSL----KPQSELFLCFSFQLTNLLI--LVSSDMASAEGILTMMSQAGLE-------- 261
P++ K S L+ N+L+ +V D+ L A +
Sbjct: 483 FAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIA 542
Query: 262 ------------PSAQTYTKLMCGYAKHGDMDSVRR-LLAQSGSSLV--NGDYLDIIHAL 306
P+ Y M G K G ++ RR L S S N Y +IH
Sbjct: 543 DTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGF 602
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
+ +G +VN F+ L M+++ GL P+ TY L+ G K G +D R
Sbjct: 603 SAAG-------------YVNEAFN-LRDEMVNK-GLVPNITTYNALLNGLCKSGYLDRAR 647
Query: 367 RLLAQ 371
RL +
Sbjct: 648 RLFDK 652
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 84/216 (38%), Gaps = 8/216 (3%)
Query: 68 DPFSVHTGELDVPLDISHY--NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI 125
D V L V L ++ + N+L+ Y N L + ++P+ +Y
Sbjct: 190 DAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSY---- 245
Query: 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM 185
L+ YC+DG A + + M K + +N L+ G + D A + +M
Sbjct: 246 --CTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLM 303
Query: 186 SQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM 245
Q G+ P+ Y L+ G K GD T + + ++F + +M
Sbjct: 304 LQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEM 363
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
A+ M + G +P TY L GY K G+++
Sbjct: 364 DGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVE 399
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 12/184 (6%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
PN V Y ++ C+ G + A + + +F + LI+G S A +
Sbjct: 555 PNNVVYNIAMAG------LCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYV 608
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT 235
A + M GL P+ TY L+ G K G +D + L + + ++
Sbjct: 609 NEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTY--- 665
Query: 236 NLLILVSSDMASAEGILTM---MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
N+LI S L + M + G+ PS TY+ L+ G+ K D++ +LL + +
Sbjct: 666 NILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKA 725
Query: 293 SLVN 296
S V+
Sbjct: 726 SNVD 729
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 97/250 (38%), Gaps = 43/250 (17%)
Query: 72 VHTGE--------LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQ 123
VH GE LD+ D Y L+ Y + + + ++ +GIEP VTY
Sbjct: 223 VHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNT 282
Query: 124 LISNSKLISKY----------CQDGN----------IEGATKILEFMRDKTF---PISEG 160
L+ Y Q G ++G K+ +F R T ++ G
Sbjct: 283 LLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARG 342
Query: 161 V------FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
+ FN +I G + +M A+ M + G +P TY L GY K G+++
Sbjct: 343 INKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAF 402
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLIL---VSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
++ + S ++ N LI+ S ++ +L M GL P+ TY L+
Sbjct: 403 KIKEKMEKEEIF---PSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALI 459
Query: 272 CGYAKHGDMD 281
G+ G +D
Sbjct: 460 AGWCDQGRLD 469
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 24/191 (12%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F L P+ TY LI + G + A + + M +K + +NA
Sbjct: 579 FFLGLSHGSFTPDNFTY------CTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNA 632
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSIKTKI---- 217
L+ G ++ + A + + GL P+ TY L+ GY K G + ++ K+
Sbjct: 633 LLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEG 692
Query: 218 --PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
PS+ S L F Q SD+ A +L M + ++ + T++KL+ G
Sbjct: 693 ISPSIITYSSLINGFCKQ---------SDVEEAMKLLNEMKASNVDQTIATFSKLVEGCI 743
Query: 276 KHGDMDSVRRL 286
+HGD+ + +L
Sbjct: 744 QHGDVKKMSKL 754
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 8/113 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+ Y + D K+ +GI P+ +TY S LI+ +C+ ++E
Sbjct: 661 NVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITY------SSLINGFCKQSDVE 714
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
A K+L M+ + F+ L+ G Q D+ + MM A PSA
Sbjct: 715 EAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMMHMAC--PSA 765
Score = 42.7 bits (99), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 87/244 (35%), Gaps = 56/244 (22%)
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
+ NS LI+ YC++G + ++L MR + L+ G+ + + A +
Sbjct: 208 FVCNS-LINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCD 266
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
M + G+EP+ TY L+ G + GD D+++
Sbjct: 267 QMLRKGIEPTVVTYNTLLKGLCRFGDYKDALR---------------------------- 298
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---Y 299
+ +M Q G+ P+ Y L+ G K GD L + +N +
Sbjct: 299 --------LWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAF 350
Query: 300 LDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
+I+ L G + E M + G +P TY L GY K
Sbjct: 351 NTMINGLCKMGEMDGAKETF---------------KRMEELGCKPDGITYRTLSDGYCKV 395
Query: 360 GDMD 363
G+++
Sbjct: 396 GNVE 399
>gi|308810923|ref|XP_003082770.1| leaf protein (ISS) [Ostreococcus tauri]
gi|116061239|emb|CAL56627.1| leaf protein (ISS) [Ostreococcus tauri]
Length = 807
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 15/221 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAK-------LESQGIEPNRVTYQQLISNSKLISKY 134
D HYNA LR + + + L + LE Q RV+ S LI +
Sbjct: 236 DERHYNAFLRGLCERDDLEEADEVLRRWNNEKFDLERQSDRGGRVSKPSAASYGLLIDAW 295
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTM--------MS 186
+ GN+ A K+L+ M+ + S +FN LI G+ + ++ +AEG+ M
Sbjct: 296 ARRGNMLAARKLLQQMQWERIAPSLQLFNILIGGYLKQGNIGAAEGLFRELESSGTWDME 355
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
G+ P TYT + +A G +D+ + + + +F + D
Sbjct: 356 SLGIRPDNVTYTLFLDYWASQGQVDACERIFDRMARKKVTADVQAFGTLVKAYARARDPD 415
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
AE +L + A +EPS Y+ ++ + G+M R +L
Sbjct: 416 GAERVLDRLEAADVEPSVAVYSAVIAAFCTVGEMKRAREIL 456
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ES GI P+ VTY + + + G ++ +I + M K F L+
Sbjct: 354 MESLGIRPDNVTY------TLFLDYWASQGQVDACERIFDRMARKKVTADVQAFGTLVKA 407
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI-----PSLKPQ 223
+++A D AE +L + A +EPS Y+ ++ + G+M + + SL+P
Sbjct: 408 YARARDPDGAERVLDRLEAADVEPSVAVYSAVIAAFCTVGEMKRAREILDRMFDASLRPN 467
Query: 224 SELFLCFSFQLTNL 237
F F++ L
Sbjct: 468 ERTFAHFAWGYGQL 481
Score = 46.6 bits (109), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 15/165 (9%)
Query: 66 CEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI 125
CE F V D+ + L++ Y L +LE+ +EP+ Y
Sbjct: 382 CERIFD-RMARKKVTADVQAFGTLVKAYARARDPDGAERVLDRLEAADVEPSVAVY---- 436
Query: 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM 185
S +I+ +C G ++ A +IL+ M D + +E F +G+ Q D+ + +M
Sbjct: 437 --SAVIAAFCTVGEMKRAREILDRMFDASLRPNERTFAHFAWGYGQLEDINGIVDVAKLM 494
Query: 186 SQAGLEPSAQTYTKLM-----CGY---AKHGDMDSIKTKIPSLKP 222
GL+ ++ CG A H +D + ++ KP
Sbjct: 495 LANGLKLKGANRNAIVRACEECGMSIGAIHALLDRLNPEVSQRKP 539
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 110/278 (39%), Gaps = 20/278 (7%)
Query: 180 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI 239
G + +++ G P+ +T+T ++ G + +P ++ + +
Sbjct: 116 GAVATLARDGHRPTRKTFTAVIATLGGMGRATETLSVVPMIEEYGDEADVAVWNAVAHAH 175
Query: 240 LVSSDMASAEGIL-TMMSQAGLEPSAQTYTKLMCGYAKHGDMDS----VRRLLAQSGSSL 294
S D AE I M ++ G+ S T+ +++ YA++G+ + +RR+ + G
Sbjct: 176 CASGDPVEAERIADRMAAEGGVGVSGATHPEIIYTYARYGEANRAYRLIRRMSNEHGVIP 235
Query: 295 VNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMC 354
Y + L E DEV + + N F +PSA +Y L+
Sbjct: 236 DERHYNAFLRGLCERDDLEEADEV--LRRWNNEKFDLERQSDRGGRVSKPSAASYGLLID 293
Query: 355 GYAKHGDMDSIRRLLAQNGSSLVN----------GDYLDIIHALAVSGHGEYIDEIISKI 404
+A+ G+M + R+LL Q + G YL + A G ++ +
Sbjct: 294 AWARRGNMLAARKLLQQMQWERIAPSLQLFNILIGGYLKQGNIGAAEGLFRELESSGTWD 353
Query: 405 QPGVGYSADAANHIYHL---INKGQIDAAYRIVNTLAR 439
+G D + L ++GQ+DA RI + +AR
Sbjct: 354 MESLGIRPDNVTYTLFLDYWASQGQVDACERIFDRMAR 391
>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 148/371 (39%), Gaps = 43/371 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ Y+ L ++ G+ N+VTY L+ S ++G + A K
Sbjct: 262 YNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELS------VKNGKMSDAEK 315
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + MR++ V+ +LI + + +M A + +++ GL PS+ TY L+ G
Sbjct: 316 LFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVC 375
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEP 262
K G+M + + + ++ + F N LI + A I +M Q G +
Sbjct: 376 KVGEMGAAEILMNEMQSKGVNITQVVF---NTLIDGYCRKGMVDEASMIYDVMEQKGFQA 432
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
T + + + D ++ L + G L Y ++I G+ E
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVE-----E 487
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGSSL 376
A FV MS G++P+A TY ++ Y K G + R+L A NG
Sbjct: 488 AKRLFVE----------MSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDP 537
Query: 377 VNGDYLDIIHALAVSGHGEYIDEIISKI------QPGVGYSADAANHIYHLINKGQIDAA 430
+ Y +IH ++ + + + S++ Q V Y+ I L G+ D A
Sbjct: 538 DSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV----MISGLSKAGKSDEA 593
Query: 431 YRIVNTLARSA 441
+ + + + R
Sbjct: 594 FGLYDEMKRKG 604
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V L Y L+ VY + ++ S+G++PN +TY + +I YC+ G
Sbjct: 465 VKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITY------NVMIYAYCKQG 518
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
I+ A K+ M + +LI+G A+++ A + + M GL+ ++ TYT
Sbjct: 519 KIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 578
Query: 199 KLMCGYAKHGDMD 211
++ G +K G D
Sbjct: 579 VMISGLSKAGKSD 591
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 87/205 (42%), Gaps = 44/205 (21%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
+L ++ G++ + V+Y + LI YC++GN+E A ++ M K + +N
Sbjct: 456 WLFRMMEGGVKLSTVSY------TNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNV 509
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+IY + + + A + M G++P + TYT L+ HG+
Sbjct: 510 MIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI-----HGE--------------- 549
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
++ ++ A + + M GL+ ++ TYT ++ G +K G D
Sbjct: 550 ---------------CIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAF 594
Query: 285 RL---LAQSGSSLVNGDYLDIIHAL 306
L + + G ++ N Y +I ++
Sbjct: 595 GLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/407 (18%), Positives = 150/407 (36%), Gaps = 79/407 (19%)
Query: 89 LLRVYLDN---EHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ RVY+DN E D++ K +G+ + + + +K + I+ +
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVK---KGLSIDERSCIVFLVAAK------KRRRIDLCLE 210
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I M D I+ ++ G + ++ ++ ++ S G++P A TY ++ Y
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYV 270
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K D ++ + +K ++ ++ L L + + M+ AE + M + G+E
Sbjct: 271 KQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVH 330
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
YT L+ + G+M L +
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDE------------------------------------ 354
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDII 385
+++ GL PS+ TY L+ G K G+M + L+ + S VN ++
Sbjct: 355 -----------LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN--ITQVV 401
Query: 386 HALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANING 445
+ G+ + G+ D A+ IY ++ + A NT+A N
Sbjct: 402 FNTLIDGY----------CRKGM---VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLK 448
Query: 446 EQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINK-GQIDAAYRI 491
+L R M + GV S + ++ + K G ++ A R+
Sbjct: 449 RYDEAKQWLFRMM----EGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 6/211 (2%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
P D YN ++ ++ L ++ G PN +Y ++ +C+
Sbjct: 226 CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHG------FCKAN 279
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A +LE M + P + +I G + + + A ++ M Q G +P+ TY
Sbjct: 280 RVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 339
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G+ + GD+D + + + ++ + +DM A +L MM Q
Sbjct: 340 TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQT 399
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
G P A Y+ ++ G+ K G + LL Q
Sbjct: 400 GCPPDAINYSTIISGFCKAGKLREAHDLLEQ 430
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/340 (19%), Positives = 130/340 (38%), Gaps = 67/340 (19%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
P D+ Y ++ + + K+ +G +PN +TY L+ +C+ G
Sbjct: 296 CPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITY------GTLVDGFCRVG 349
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+++GA +++ M ++ + + +N +++ + NDM A +L MM Q G P A Y+
Sbjct: 350 DLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYS 409
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
++ G+ K G + A +L M +
Sbjct: 410 TIISGFCKAG-----------------------------------KLREAHDLLEQMIRR 434
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH---- 311
G P + L+ K +DS + LL S D Y +IHAL +
Sbjct: 435 GCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEA 494
Query: 312 GEYIDEVSAIVCFVNICFH----------------WLEGPMMSQAGLEPSAQTYTKLMCG 355
++D + C+ ++ + +L M AG+ P TY+ ++
Sbjct: 495 ESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHS 554
Query: 356 YAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSG 392
+ K ++DS ++L + + D Y +I+ L +G
Sbjct: 555 FCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAG 594
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 90/214 (42%), Gaps = 18/214 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN+++ + ++ + G+ P+ VTY S +I +C+D N++
Sbjct: 509 DVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTY------SIVIHSFCKDNNLD 562
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+LE M++ ++ALI G +A + A + M G P+ TY L+
Sbjct: 563 SAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLI 622
Query: 202 CGYAK------HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
G K +M I K S P S + C L N +S + A +L M
Sbjct: 623 DGLCKINKVEQAAEMLEIMRK-QSCTPDSITYTCLINGLCN-----ASRLEEAWRVLREM 676
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
G P TY L+ K +++ V +LL +
Sbjct: 677 KDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKE 710
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 117/293 (39%), Gaps = 18/293 (6%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
P D+ Y+ ++ + + + + S+G PN VTY S L+ C+ G
Sbjct: 944 CPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTY------SSLLHGLCKAG 997
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ AT +L+ M + +N +I GH + + A +L M G +P+ TYT
Sbjct: 998 KLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYT 1057
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ + K G + + + + + F++ + ++ A +L+ M Q
Sbjct: 1058 VLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQK 1117
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
G P+ +Y ++ G K + LL Q L N DI+ ID +
Sbjct: 1118 GCVPNVVSYNTVIAGLCKATKVHEGVLLLEQ---MLSNNCVPDIVT------FNTIIDAM 1168
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
V+I + ++ ++G P+ TY L+ G K D LL +
Sbjct: 1169 CKTY-RVDIAYELFN--LIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLRE 1218
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 101/264 (38%), Gaps = 59/264 (22%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
S+ P+ VTY +I+ +SK ++ A ++LE M D F + +N +++G
Sbjct: 223 SKTCPPDSVTYNTMING---LSK---SDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFC 276
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+AN + +A +L M G P +YT ++ G K +D
Sbjct: 277 KANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDE------------------ 318
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLL 287
A ++ M Q G +P+ TY L+ G+ + GD+D + R +
Sbjct: 319 -----------------ACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKM 361
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
+ G Y +I+H E +V MM Q G P A
Sbjct: 362 TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQ---------------MMIQTGCPPDAI 406
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
Y+ ++ G+ K G + LL Q
Sbjct: 407 NYSTIISGFCKAGKLREAHDLLEQ 430
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 130/313 (41%), Gaps = 65/313 (20%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ G +PN VTY + L+ +C+ G E A ++E M +K + + +N+
Sbjct: 1040 LLEEMVDGGCQPNVVTY------TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 1093
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---------------- 208
L+ + +++ A +L+ M Q G P+ +Y ++ G K
Sbjct: 1094 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 1153
Query: 209 ---DMDSIKTKIPSLKPQSELFLCFSFQLTNLL------------------ILVSSDMAS 247
D+ + T I ++ + + +++L NL+ + S
Sbjct: 1154 CVPDIVTFNTIIDAMCKTYRVDI--AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQ 1211
Query: 248 AEGILTMMSQA-GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
AE +L M++ G P TY ++ G K +D +L Q S + D D+ +++
Sbjct: 1212 AEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPD--DVTYSI 1269
Query: 307 AVSG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
+S ++DE + ++ +M + G +P A TY L+ G+ K G++D
Sbjct: 1270 VISSLCKWRFMDEANNVL------------ELMLKNGFDPGAITYGTLIDGFCKTGNLDK 1317
Query: 365 ---IRRLLAQNGS 374
I +LL GS
Sbjct: 1318 ALEILQLLLSKGS 1330
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 134/352 (38%), Gaps = 77/352 (21%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY--------------------QQLI 125
YN+LL ++ + L+ + +G PN V+Y +Q++
Sbjct: 1091 YNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 1150
Query: 126 SNS---------KLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
SN+ +I C+ ++ A ++ +++ + +N+L++G ++
Sbjct: 1151 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 1210
Query: 177 SAEGILTMMSQA-GLEPSAQTYTKLMCGYAKHGDMDS-----IKTKIPSLKPQSELFLCF 230
AE +L M++ G P TY ++ G K +D ++ L P + +
Sbjct: 1211 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD---VTY 1267
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
S +++L D A +L +M + G +P A TY L+ G+ K G++D
Sbjct: 1268 SIVISSLCKWRFMD--EANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA------- 1318
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG-----------PMMSQ 339
L+I+ L G Y D V+ +I WL M +
Sbjct: 1319 ---------LEILQLLL--SKGSYPDVVT-----FSIFIDWLSKRGRLRQAGELLETMLR 1362
Query: 340 AGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSSLVNGDYLDIIHAL 388
AGL P TY L+ G+ D + ++ Q G N Y ++ L
Sbjct: 1363 AGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 1414
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 15/241 (6%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAK--LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGA 143
YN+L+ L F ++L + QG P+ +TY +I C+ ++ A
Sbjct: 1196 YNSLVH-GLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDG------LCKSKRVDRA 1248
Query: 144 TKI-LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
K+ L+ + D P + ++ +I + M A +L +M + G +P A TY L+
Sbjct: 1249 YKLFLQMLSDGLAP-DDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLID 1307
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
G+ K G++D + L + +F + + + A +L M +AGL P
Sbjct: 1308 GFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP 1367
Query: 263 SAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDII-HALAVSGHGEYIDEV 318
TY L+ G+ D + ++ Q G N Y ++ H + + + + EV
Sbjct: 1368 DTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEV 1427
Query: 319 S 319
S
Sbjct: 1428 S 1428
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 25/226 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN ++ ++ ++ S G+ P+ VTY S +IS C+ ++
Sbjct: 1228 DIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY------SIVISSLCKWRFMD 1281
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +LE M F + LI G + ++ A IL ++ G P T++ +
Sbjct: 1282 EANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFI 1341
Query: 202 CGYAKHGDM----DSIKTKIPS-LKPQSELFLCFSFQLTNLLILVSSDMASAE---GILT 253
+K G + + ++T + + L P + + N L+ D + E +
Sbjct: 1342 DWLSKRGRLRQAGELLETMLRAGLVPDTVTY--------NTLLKGFCDASLTEDAVDLFE 1393
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDY 299
+M Q G EP TYT L+ D S + LLA+ S+V+ +
Sbjct: 1394 VMRQCGCEPDNATYTTLV---GHLVDKKSYKDLLAEVSKSMVDTGF 1436
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 24/223 (10%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
+ V LD+S YN L+ + T + +GI + +TY LI YC
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHG------YCI 588
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+++ A + M + + +N L+ G S A + A G++ M + GL P+A T
Sbjct: 589 SSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATT 648
Query: 197 YTKLMCGYAKHGDMDSI---------KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
Y L+ G+ K G+M K +P + + L CF+ M+
Sbjct: 649 YDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFA---------KGKKMSQ 699
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
A+ ++ M G+ P++ TY L+CG+ K + + L +S
Sbjct: 700 AKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 102/261 (39%), Gaps = 73/261 (27%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+L G++ + TY LIS +C+ G I AT + + M K +NALI+
Sbjct: 531 QLVGMGVKLDLSTYNTLIST------FCRLGMIRRATLVFKDMMGKGILADIITYNALIH 584
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G+ ++ + A + + M G+ P+ +TY L+ G +
Sbjct: 585 GYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLS---------------------- 622
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + A G++ M + GL P+A TY L+ G+ K G+M +L
Sbjct: 623 -------------AARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL- 668
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA------- 340
Y ++I V Y +S CF +G MSQA
Sbjct: 669 -----------YCEMITKGFVPKTRTYNVLIS---CFA-------KGKKMSQAKELMQEM 707
Query: 341 ---GLEPSAQTYTKLMCGYAK 358
G+ P++ TY L+CG+ K
Sbjct: 708 QVRGIPPNSSTYDILICGWYK 728
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 128/302 (42%), Gaps = 28/302 (9%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
++ + H+N L+ Y N + L ++++G P+ VTY L++ +C+
Sbjct: 12 EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNG------FCKI 65
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G++ A K++ + + + LI + ++ + A + M+ L P TY
Sbjct: 66 GDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTY 125
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
T +M G K G ++ K+ ++ + FS+ + ++A A + M
Sbjct: 126 TCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVV 185
Query: 258 AGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
G+ YT LM G K G + + + ++L + SLV + ++ + GH +
Sbjct: 186 RGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLE--ESLVPN---CVTYSALIDGHCKL 240
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG----DMDSIRRLLA 370
D VN L+ M + + P+ Y+ ++ GY K G MD +R+++
Sbjct: 241 GD--------VNKGELLLQE--MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQ 290
Query: 371 QN 372
+N
Sbjct: 291 RN 292
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 120/293 (40%), Gaps = 41/293 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D+ Y ++ + ++E G+ PNR +Y + LI ++G
Sbjct: 119 VP-DVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSY------ATLIDSLFKEG 171
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A + M + V+ AL+ G +A +AE + ++ + L P+ TY+
Sbjct: 172 NVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYS 231
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS-SDMASAEGILT---- 253
L+ G+ K GD++ + + ++ + +F N+++ S D + +G+L
Sbjct: 232 ALIDGHCKLGDVNKGELLLQEME-EKHIF-------PNVIVYSSIVDGYTKKGLLNEAMD 283
Query: 254 ---MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS-SLVNGDYL--DIIHALA 307
M Q + P+ Y L+ GY K L + S L +++ ++ L
Sbjct: 284 VMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLK 343
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
SG E DE L MMS+ GL P YT +M G+ K G
Sbjct: 344 RSGRMEEADE--------------LFKDMMSR-GLLPDRVNYTSMMDGFFKAG 381
>gi|115444491|ref|NP_001046025.1| Os02g0170000 [Oryza sativa Japonica Group]
gi|49388067|dbj|BAD25179.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535556|dbj|BAF07939.1| Os02g0170000 [Oryza sativa Japonica Group]
Length = 397
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 129/317 (40%), Gaps = 34/317 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y LLR Y + ++++ GI PN Y + L+ C E A +
Sbjct: 15 YALLLRAYCNAGSLHRAEGVISEMREHGIPPNATVYNAYLDG--LLKARC----TEKAVE 68
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M+ + + F +I + +A S+ + M G +P+ TYT L+ +A
Sbjct: 69 VYQRMKRERCRANTETFTLMINVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFA 128
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG---ILTMMSQAGLEP 262
+ G + + ++ +++ N L+ S +G I ++M G EP
Sbjct: 129 REGLCEKAEEVFEEMQQAGHEPDVYAY---NALMEAYSRAGLPQGASEIFSLMQHMGCEP 185
Query: 263 SAQTYTKLMCGYAK---HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
+Y L+ Y + H D ++V L Q G S ++ ++ A A SG+ +EV
Sbjct: 186 DRASYNILVDAYGRAGLHEDAEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVM 245
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSSL 376
A + ++GL P ++ YA+ G +D + RL A + G +
Sbjct: 246 A---------------QLHKSGLTPDTFALNAMLNAYARAGRLDDMERLFAAMERRGDAD 290
Query: 377 VNGDYLDIIHALAVSGH 393
V G Y ++A +G+
Sbjct: 291 V-GTYNVAVNAYGRAGY 306
>gi|255583688|ref|XP_002532598.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527686|gb|EEF29795.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 553
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 125/292 (42%), Gaps = 29/292 (9%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP +SH AL+ Y + +++S G +P+ VTYQ ++ N + +
Sbjct: 172 VPNVVSH-TALMEAYGRGARYNNAEAIFRRMQSSGPKPSAVTYQIILKN------FVEGN 224
Query: 139 NIEGATKILEFMRDK-TFPIS--EGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ A ++ E + D+ P+ + +F+ +IY H +A + A I +M+Q G+ S
Sbjct: 225 KFKEAEEVFETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYEKARQIFALMTQRGVPKSTV 284
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
TY LM + ++ I ++ Q ++ + ++ + D A A + M
Sbjct: 285 TYNSLMSFETNYKEVSKIYDQMQRSGLQPDV-ISYALLINAYGKARREDEALA--VFEEM 341
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
AG+ P+ + Y L+ +A G ++ R + D L+ Y+
Sbjct: 342 LDAGVRPTHKAYNILLDAFAISGMVEQARTVFKSMRRDRYTPDLCSYTTMLSA-----YV 396
Query: 316 D--EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
+ +++ F N + Q GLEP+ TY L+ GYAK ++D +
Sbjct: 397 NASDMAGAENFFN---------RLKQDGLEPNVVTYGALIKGYAKTNNLDKM 439
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 105/244 (43%), Gaps = 20/244 (8%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI+ Y + GN A K+L +M + + AL+ + + +AE I M +G
Sbjct: 146 LITAYGKQGNFSAAEKVLSYMNKMGYVPNVVSHTALMEAYGRGARYNNAEAIFRRMQSSG 205
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV---SSDMA 246
+PSA TY ++ + + + +L + + L ++ +++I + + +
Sbjct: 206 PKPSAVTYQIILKNFVEGNKFKEAEEVFETLLDEEKSPLKPDQKMFHMMIYMHRKAGNYE 265
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HA 305
A I +M+Q G+ S TY LM + ++ + + +SG D+I +A
Sbjct: 266 KARQIFALMTQRGVPKSTVTYNSLMSFETNYKEVSKIYDQMQRSGLQ------PDVISYA 319
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
L ++ +G+ E A+ F M AG+ P+ + Y L+ +A G ++
Sbjct: 320 LLINAYGKARREDEALAVFEE----------MLDAGVRPTHKAYNILLDAFAISGMVEQA 369
Query: 366 RRLL 369
R +
Sbjct: 370 RTVF 373
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 93/250 (37%), Gaps = 13/250 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y L+ Y ++ G+ P Y + L+ + G +E
Sbjct: 314 DVISYALLINAYGKARREDEALAVFEEMLDAGVRPTHKAY------NILLDAFAISGMVE 367
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + MR + + ++ + A+DMA AE + Q GLEP+ TY L+
Sbjct: 368 QARTVFKSMRRDRYTPDLCSYTTMLSAYVNASDMAGAENFFNRLKQDGLEPNVVTYGALI 427
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GYAK ++D + K ++ + F + D SA M Q G+
Sbjct: 428 KGYAKTNNLDKMMEKYEEMQLRGVKANQTIFTTIMDAYGKNKDFGSAVIWYKEMEQYGVP 487
Query: 262 PSAQTYTKLMCGYAKHGD-MDSVRRLLAQSGSSLVNGDYLDIIHA--LAVSGHGEYIDEV 318
P Q ++ AK D +++ SG GD I + L G G Y
Sbjct: 488 PD-QKAKNILLSLAKTADEQKEANQMVGHSGDC---GDAHSIFGSSRLLNFGLGWYSAAK 543
Query: 319 SAIVCFVNIC 328
+V FV C
Sbjct: 544 VILVIFVKSC 553
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 132/315 (41%), Gaps = 38/315 (12%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P+++ +L++ Y + S + K+ G+ PN+VTY S LI C GN
Sbjct: 322 PMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTY------SVLIEGCCNSGN 375
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
IE A+++ M+ P S N+L+ G+ +A A + G+ + TY
Sbjct: 376 IEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNI 434
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
+M K G MD + + ++ Q + S+ L +M A + + M
Sbjct: 435 MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD 494
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS-SLVNGDYL--DIIHALAVSGH-GEYI 315
L+P+ TY+ L+ G K GD + L Q S ++ D+ II+ L G E
Sbjct: 495 LKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEAR 554
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQN 372
D++ + + G PS TY ++ G+ K G++DS + R + +
Sbjct: 555 DKLKNFL----------------EEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEF 598
Query: 373 G--------SSLVNG 379
G +SL+NG
Sbjct: 599 GVSPNVVTYTSLING 613
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 147/367 (40%), Gaps = 31/367 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN ++ L + +QG+ PN V+Y +I +C+ GN++
Sbjct: 428 NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILG------HCRKGNMD 481
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A+ + M + + ++ LI G+ + D A + M + P+ T+ ++
Sbjct: 482 MASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTII 541
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K G M + K+ + + + C ++ + ++ SA + M + G+
Sbjct: 542 NGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVS 601
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAVSGHGEYIDEVSA 320
P+ TYT L+ G+ K +D L G LD+ ++ + G + D SA
Sbjct: 602 PNVVTYTSLINGFCKSNRIDLA---LKTRDEMREKGLELDVTAYSALIDGFCKRRDMESA 658
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLV 377
F F LE GL P+ Y ++ G+ +M++ + + +
Sbjct: 659 QDLF----FELLE------VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCD 708
Query: 378 NGDYLDIIHALAVSGH----GEYIDEIISK-IQPGVGYSADAANHIYHLINKGQIDAAYR 432
G Y +I L G + E++SK I P + N L NKGQ++ A +
Sbjct: 709 LGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVN---GLCNKGQLENARK 765
Query: 433 IVNTLAR 439
I+ + R
Sbjct: 766 ILEEMDR 772
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 108/287 (37%), Gaps = 73/287 (25%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+++ ++ + S ++ G+ PN VTY + LI+ +C+ I+ A K
Sbjct: 572 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY------TSLINGFCKSNRIDLALK 625
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ MR+K + ++ALI G + DM SA+ + + + GL P+ Y ++ G+
Sbjct: 626 TRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFR 685
Query: 206 KHGDMDS--------IKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMM 255
+M++ I +IP C T L+ +L + A + M
Sbjct: 686 DLNNMEAALVWYKKMINDRIP----------CDLGTYTTLIDGLLKEGRLVFASDLYMEM 735
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
G+ P T+ L+ G G +++ R++L +
Sbjct: 736 LSKGIVPDIITFHVLVNGLCNKGQLENARKILEE-------------------------- 769
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
M + + PS Y L+ GY + G++
Sbjct: 770 ---------------------MDRKNMTPSVLIYNTLIAGYFREGNL 795
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P D+ Y L+ L +D ++ S+GI P+ +T+ L++ C G
Sbjct: 705 IPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNG------LCNKG 758
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A KILE M K S ++N LI G+ + ++ A + M GL P TY
Sbjct: 759 QLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYD 818
Query: 199 KLMCGYAKHGD 209
L+ G K GD
Sbjct: 819 ILINGKFK-GD 828
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 77/205 (37%), Gaps = 41/205 (20%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + LD++ Y+AL+ + S D +L G+ PNR+ Y +IS + ++
Sbjct: 632 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLN--- 688
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
N+E A + M + P G + LI G + + A + M G+ P
Sbjct: 689 ---NMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDII 745
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+ L+ G LC QL N A IL M
Sbjct: 746 TFHVLVNG------------------------LCNKGQLEN-----------ARKILEEM 770
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDM 280
+ + PS Y L+ GY + G++
Sbjct: 771 DRKNMTPSVLIYNTLIAGYFREGNL 795
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 93/252 (36%), Gaps = 45/252 (17%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S +I C+ N ++LE M+++ + SE F ++I +M A + M
Sbjct: 259 SIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMIN 318
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVS 242
G + T LM GY G++DS K L P + N S
Sbjct: 319 CGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCN-----S 373
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI 302
++ A + T M G+ PS L+ GY K L + S L +
Sbjct: 374 GNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAP--------LWEEASKLFD------ 419
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWL-EGPMMSQA----------GLEPSAQTYTK 351
E +D A + NI WL +G M +A G+ P+ +Y
Sbjct: 420 ----------EAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYND 469
Query: 352 LMCGYAKHGDMD 363
++ G+ + G+MD
Sbjct: 470 MILGHCRKGNMD 481
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 119/290 (41%), Gaps = 58/290 (20%)
Query: 82 DISHYNALLRVYLDNEHTFS-PTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ + N +LR+ D + + + + GI P VTY ++ + +C+ G +
Sbjct: 153 DLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDS------FCKQGKV 206
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A ++L M+ ++ +N L+ G S + ++ A+ ++ M + GLE SA TY L
Sbjct: 207 QEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPL 266
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ GY + G +D AS G M G
Sbjct: 267 IRGYCEKGQLDE---------------------------------ASRLG--EEMLSRGA 291
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL-DII-HALAVSGHGEYIDEV 318
P+ TY +M G K G + R+LL +VN + + D++ + + G+ +
Sbjct: 292 VPTLVTYNTIMYGLCKWGRVSDARKLL----DVMVNKNLMPDLVSYNTLIYGYTRLGNIG 347
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
A + F + F GL PS TY L+ G + GD+D RL
Sbjct: 348 EAFLLFAELRFR----------GLVPSVVTYNTLIDGLCRMGDLDVAMRL 387
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 145/361 (40%), Gaps = 84/361 (23%)
Query: 62 GNLPCEDPFSV------HTGELD-----------VPLDIS--HYNALLRVYLDNEHTFSP 102
G LP + ++V H+GEL+ + L++S Y+ L+R Y +
Sbjct: 220 GCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEA 279
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
+ ++ S+G P VTY ++ C+ G + A K+L+ M +K +
Sbjct: 280 SRLGEEMLSRGAVPTLVTYNTIMYG------LCKWGRVSDARKLLDVMVNKNLMPDLVSY 333
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPS 219
N LIYG+++ ++ A + + GL PS TY L+ G + GD+D +K ++
Sbjct: 334 NTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIK 393
Query: 220 LKPQSELF----LCFSF-QLTNLLI---------------------------LVSSDMAS 247
P ++F L F +L NL + L D +
Sbjct: 394 HGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSK 453
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG------DYLD 301
A G+ M G P TY + G K G++ L+ + L NG Y
Sbjct: 454 AFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKK---MLYNGLVPDHVTYTS 510
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
IIHA ++GH + + A+ +LE M G+ PS TYT L+ YA G
Sbjct: 511 IIHAHLMAGH---LRKARAV---------FLE---MLSKGIFPSVVTYTVLIHSYAVRGR 555
Query: 362 M 362
+
Sbjct: 556 L 556
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +++ +L H ++ S+GI P+ VTY + LI Y G ++ A
Sbjct: 508 YTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTY------TVLIHSYAVRGRLKLA-- 559
Query: 146 ILEF--MRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
IL F M +K + +NALI G + M A T M G+ P+ TYT L+
Sbjct: 560 ILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILI 617
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 111/279 (39%), Gaps = 18/279 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y LL + D+ + +F +++E+ G P+ VT+ + LI C+ G ++
Sbjct: 331 DRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTF------TILIDALCKVGKVD 384
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A L+ M+ + + +N LI G + N + A + M GLE +A TY +
Sbjct: 385 EAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFI 444
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
Y K G+ +K + + + + + A+ + + GL
Sbjct: 445 DYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLA 504
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P A TY LM Y K G +D +LL++ + + + + I + + +DE
Sbjct: 505 PDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEA--- 561
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
W M + L P+ TY L+ G K G
Sbjct: 562 ---------WKMFQRMKEMKLAPTVVTYNTLLAGLGKEG 591
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 127/312 (40%), Gaps = 29/312 (9%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ Y+AL+ + L ++ES G+ PN T+ I +++ + G I+
Sbjct: 227 LKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICI---RILGR---AGKIDE 280
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A IL+ M D + LI A + +A+ + M + +P TY L+
Sbjct: 281 AYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLD 340
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
++ HGD+D+IK ++ L +F + + + A G L +M + G+ P
Sbjct: 341 KFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAP 400
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGH-GEYID-- 316
+ TY L+CG + +D L + G Y+ I SG G+ I
Sbjct: 401 NLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTF 460
Query: 317 ---EVSAIVCFVNICFHWL-----EGPM---------MSQAGLEPSAQTYTKLMCGYAKH 359
+ + IV + C L +G + + + GL P A TY LM Y K
Sbjct: 461 EKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKA 520
Query: 360 GDMDSIRRLLAQ 371
G +D +LL++
Sbjct: 521 GRVDDAIKLLSE 532
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 134/334 (40%), Gaps = 32/334 (9%)
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G + A LE MR F ++ + LI+ ++ A + M G++PS +TY
Sbjct: 171 GGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTY 230
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
+ LM K D++++ + ++ ++F + ++ + + A GIL M
Sbjct: 231 SALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDD 290
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHG---- 312
AG P TYT L+ G +++ + L + +S D + I L S HG
Sbjct: 291 AGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDA 350
Query: 313 --EYIDEVSA------IVCF------------VNICFHWLEGPMMSQAGLEPSAQTYTKL 352
E+ E+ A +V F V+ F L+ +M + G+ P+ TY L
Sbjct: 351 IKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLD--VMKKQGVAPNLHTYNTL 408
Query: 353 MCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQP-GV 408
+CG + +D L + G Y+ I SG + K++ G+
Sbjct: 409 ICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGI 468
Query: 409 GYSADAAN-HIYHLINKGQIDAAYRIVNTLARSA 441
+ A N +Y L +G+++ A N L +
Sbjct: 469 VPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCG 502
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 110/283 (38%), Gaps = 22/283 (7%)
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
++ H + DM + +M + ++ S TY + G + + ++
Sbjct: 131 MLRAHRRVEDMVV---VFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVG 187
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ +S+ L+L S A + M G++PS +TY+ LM K D+++V
Sbjct: 188 FVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVM 247
Query: 285 RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
LL + S + + + + G IDE I+ M AG P
Sbjct: 248 GLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGIL------------KRMDDAGCGP 295
Query: 345 SAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEII 401
TYT L+ G +++ + L + +S D Y+ ++ + G + I E
Sbjct: 296 DVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFW 355
Query: 402 SKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSA 441
S+++ GY D I L G++D A+ ++ + +
Sbjct: 356 SEMEAD-GYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQG 397
Score = 43.5 bits (101), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN ++ ++ ++ ++GI P+ TY LI N + G +E
Sbjct: 997 DLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIA------GMVE 1050
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A K+ E ++ K + +NALI GHS + + A + M G P+ T+ +L
Sbjct: 1051 EAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 128/317 (40%), Gaps = 35/317 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D + YNAL+ Y + FLA++ P VTY ++ C+ G
Sbjct: 42 VP-DDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG------LCKAG 94
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A K+L+ MRDK + +N ++ G + + A+ +L M+ G P TY
Sbjct: 95 RTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYN 154
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
+ G K +D + K + P + + ++ + L S D+ SA +L M+
Sbjct: 155 SFIKGLCKCDRVDEAR-KFLARMPVTPDVVSYTTVINGL--CKSGDLDSASRMLDQMTNR 211
Query: 259 GLEPSAQTYTKLMCGYAKHGD-------MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH 311
G P TY+ L+ G+ K G+ +DS+ +L + N L +H L G
Sbjct: 212 GCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNS-LLGALHRLGHIGK 270
Query: 312 GEYI-----------DEVSAIVCFVNICFHWLEGPM------MSQAGLEPSAQTYTKLMC 354
E + D VS C +C M + G P+A +Y+ L+
Sbjct: 271 AEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVE 330
Query: 355 GYAKHGDMDSIRRLLAQ 371
K ++D L+ Q
Sbjct: 331 ELCKKKELDDAITLVEQ 347
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 101/240 (42%), Gaps = 15/240 (6%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ C+ +E A ++L M++ + ++NALI G+S+A D A L M +
Sbjct: 16 LLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH 75
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
P+ TYT ++ G K G + ++ + +++ + + + A+
Sbjct: 76 CLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAK 135
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+L M+ G P TY + G K +D R+ LA+ + Y +I+ L S
Sbjct: 136 KMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKS 195
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G +D S ++ M+ G P TY+ L+ G+ K G+++ LL
Sbjct: 196 GD---LDSASRML------------DQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240
Score = 43.1 bits (100), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 94/233 (40%), Gaps = 15/233 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y++L+ + L + G PN V Y L+ + G+I
Sbjct: 216 DVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL------GHIG 269
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L M + F +NA I G +A + A+ + M + G P+A +Y+ L+
Sbjct: 270 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLV 329
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSEL--FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
K ++D T + + + ++ L ++ L L D A A ++ +
Sbjct: 330 EELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACAL-FSKVLDEKI 388
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSV----RRLLAQSGSSLVNGDYLDIIHALAV 308
EP Y ++ + K +D +++L ++ ++V + L +H L V
Sbjct: 389 CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNIL--VHGLCV 439
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 131/339 (38%), Gaps = 65/339 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ +Y + ++E G+ P+ VTY LI +C++G +
Sbjct: 231 DLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYG------FCREGRMR 284
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + T P + + LI G+ + ND+ A + +M GL P TY ++
Sbjct: 285 EALRLFREINGAT-P-NHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSIL 342
Query: 202 ---CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
C K D + + ++ K + + C + L N + DM SA + M +A
Sbjct: 343 RKLCEEGKIKDANRLLNEMSERKVEPDNVTCNT--LINAYCKIG-DMGSAMKVKKKMLEA 399
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
GL+P T+ L+ G+ K ++DS + L +
Sbjct: 400 GLKPDQFTFKALIHGFCKLHEVDSAKEFLFE----------------------------- 430
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSS 375
M AG PS TY+ L+ Y + +++ RL L++ G
Sbjct: 431 ------------------MLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLF 472
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADA 414
+ Y +I L E + I + +Q G G D+
Sbjct: 473 VDISVYRALIRRLCKIDKIESAERIFTLMQ-GKGMKGDS 510
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 105/264 (39%), Gaps = 20/264 (7%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K+ G+ PN + LI C+ G++E A ++L M + +N LI
Sbjct: 187 KMVRVGVVPNIHIFNVLIHAC------CKSGDVEKAEQLLNEMESRFIFPDLFTYNTLIS 240
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
+ + A GI M + G+ P TY L+ G+ + G M + +
Sbjct: 241 LYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATPNH 300
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ ++ + + +D+ A + +M GL P TY ++ + G + RLL
Sbjct: 301 VTYTTLIDGYCRV--NDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLL 358
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
+ V D ++ ++ + + D SA+ M +AGL+P
Sbjct: 359 NEMSERKVEPD--NVTCNTLINAYCKIGDMGSAMKV----------KKKMLEAGLKPDQF 406
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQ 371
T+ L+ G+ K ++DS + L +
Sbjct: 407 TFKALIHGFCKLHEVDSAKEFLFE 430
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 94/260 (36%), Gaps = 20/260 (7%)
Query: 126 SNSKLISK----YCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
SNS+++S Y + A ++ E MR F L+ ++A +
Sbjct: 125 SNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKV 184
Query: 182 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV 241
M + G+ P+ + L+ K GD++ + + ++ + F++ L
Sbjct: 185 YKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCK 244
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD 301
A GI M + G+ P TY L+ G+ + G M RL + +NG
Sbjct: 245 KGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE-----ING---- 295
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLE-GPMMSQAGLEPSAQTYTKLMCGYAKHG 360
A H Y + C VN L +M GL P TY ++ + G
Sbjct: 296 -----ATPNHVTYTTLIDG-YCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEG 349
Query: 361 DMDSIRRLLAQNGSSLVNGD 380
+ RLL + V D
Sbjct: 350 KIKDANRLLNEMSERKVEPD 369
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 45/235 (19%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E V D + YN L+ + + L ++ Q ++P++ Y + LI +
Sbjct: 319 ERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIY------TTLIDGFV 372
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ + A KI EFM +K P +N +I G+ + M A ++ M +AG P
Sbjct: 373 RSDKLSDARKIFEFMEEKACP-DIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEF 431
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
TYT L+ GYAK GD+ + SL+ +L M
Sbjct: 432 TYTTLVDGYAKKGDISA------SLR-----------------------------LLCDM 456
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
+ +P+ TY L+CGY GD S L A+ S G + +++H + G
Sbjct: 457 MKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSE---GLFPNVVHYTVLIG 508
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/361 (20%), Positives = 140/361 (38%), Gaps = 74/361 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ + +D L ++ +G P+ +T LI + ++S G + A
Sbjct: 259 YTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALI-HGLVVS-----GQVNDALI 312
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M ++ ++N LI G + +++A+ +L M + ++P YT L+ G+
Sbjct: 313 VREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFV 372
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD---MASAEGILTMMSQAGLEP 262
+ + + ++ ++ C N++I M A ++ M +AG P
Sbjct: 373 RSDKLSDARKIFEFMEEKA----CPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIP 428
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TYT L+ GYAK GD+ + RLL
Sbjct: 429 DEFTYTTLVDGYAKKGDISASLRLLCD--------------------------------- 455
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL 382
M + +P+ TY L+CGY GD S L A+ S G +
Sbjct: 456 --------------MMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSE---GLFP 498
Query: 383 DIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH-------IYHLINKGQIDAAYRIVN 435
+++H + G D++ IQ + NH +++L+N G ++ + +VN
Sbjct: 499 NVVHYTVLIGSLFKKDKV---IQAAAYFEHMLLNHCPPNDATVHYLVN-GLVNCRHGMVN 554
Query: 436 T 436
+
Sbjct: 555 S 555
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 122/302 (40%), Gaps = 56/302 (18%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ ++G+ PN Y + +I+ C+ + A+ +L M F FN
Sbjct: 173 LLGEMRARGLSPNVQIY------NTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNT 226
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---------------- 208
+I G + D+ A +L + GLEP+ +YT L+ G+ G
Sbjct: 227 MIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRG 286
Query: 209 ---DMDSIKTKIPSL-------------KPQSELFLCFSFQLTNLLI--LVSSDMAS-AE 249
DM ++ I L + +E + + N+LI L M S A+
Sbjct: 287 HTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAK 346
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAV 308
+L M + ++P YT L+ G+ + + R++ + DI+ + + +
Sbjct: 347 NLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIF----EFMEEKACPDIVAYNVMI 402
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
G+ ++ A+ C + M +AG P TYT L+ GYAK GD+ + RL
Sbjct: 403 KGYCKFGMMKEAVTCMSS----------MRKAGCIPDEFTYTTLVDGYAKKGDISASLRL 452
Query: 369 LA 370
L
Sbjct: 453 LC 454
Score = 47.4 bits (111), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 95/263 (36%), Gaps = 24/263 (9%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G P V Y LI YC+ G+I +L M K + + A+I+ +
Sbjct: 110 EGCVPGAVFYNVLIDG------YCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGR 163
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
D+ E +L M GL P+ Q Y ++ K + + +
Sbjct: 164 KGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVT 223
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
F D+ A +L + GLEP+ +YT L+ G+ G+ LL +
Sbjct: 224 FNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMM 283
Query: 292 SSLVNGDYLD---IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
D + +IH L VSG VN E M++ + P A
Sbjct: 284 GRGHTPDMITLGALIHGLVVSGQ-------------VNDALIVRE--KMAERQVMPDANI 328
Query: 349 YTKLMCGYAKHGDMDSIRRLLAQ 371
Y L+ G K + + + LL +
Sbjct: 329 YNVLISGLCKKRMLSAAKNLLEE 351
>gi|302821471|ref|XP_002992398.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
gi|300139814|gb|EFJ06548.1| hypothetical protein SELMODRAFT_135281 [Selaginella moellendorffii]
Length = 698
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 118/309 (38%), Gaps = 73/309 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG--NIEGA 143
YNAL+ Y N + L+K+++ G P+ V+Y +I + C+ G +I
Sbjct: 179 YNALVGAYAQNRDYGKALETLSKMKTLGFPPDVVSYTHVI-------QACRHGVVDIYTG 231
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
++ + M+ + + V+N LI+ QA+ L + +GL +Y LM
Sbjct: 232 FRLFQEMQAEGVQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLS 291
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
KHG A AE +L M GL P+
Sbjct: 292 LGKHG-----------------------------------RTAEAEALLEEMKWYGLRPN 316
Query: 264 AQTYTKLMCGYAKHGDM---DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
+ Y L+ GY++ G + D+V+ LL +G S+ Y +I A A +G +D + A
Sbjct: 317 LKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYARAG---LMDRLEA 373
Query: 321 IVCFVNIC-------------------FHWLEGPM----MSQAGLEPSAQTYTKLMCGYA 357
+ + C W +G M QAG+ P A Y ++ +
Sbjct: 374 LYQEMRDCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVIINTFG 433
Query: 358 KHGDMDSIR 366
+ ++ R
Sbjct: 434 RTRQLEQAR 442
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 126/308 (40%), Gaps = 48/308 (15%)
Query: 79 VPLDISHYNALL----RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
V +D YN L+ + + NE F FL KL++ G+ +R +Y L+ + + K+
Sbjct: 243 VQVDGKVYNDLIFACGQAHKPNEGMF----FLEKLQASGLVADRDSYISLMLS---LGKH 295
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
G A +LE M+ + +N L+ G+S+ + + + T++ G+ +
Sbjct: 296 ---GRTAEAEALLEEMKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINK 352
Query: 195 QTYTKLMCGYAKHGDMDSIKT-----KIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
TY L+ YA+ G MD ++ + ++P + ++ +I + D +
Sbjct: 353 ITYCLLIDAYARAGLMDRLEALYQEMRDCDIRPNTYMYA--------RMITIYRDTGQWQ 404
Query: 250 ---GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDII 303
+L M QAG+ P A Y ++ + + ++ R + + D + +I
Sbjct: 405 KGVKLLREMQQAGVTPDAHVYNVIINTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLI 464
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
A +G + A + M G P+AQT+ ++ G +H +
Sbjct: 465 DACCKAGQ-----PLEARKLYYK----------MVNDGCAPTAQTFNIVIHGLGEHKRWN 509
Query: 364 SIRRLLAQ 371
+ ++ +
Sbjct: 510 DVNEMVEE 517
Score = 48.5 bits (114), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 115/300 (38%), Gaps = 38/300 (12%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
+ D+ + Y ++ +Y D L +++ G+ P+ Y +I
Sbjct: 380 DCDIRPNTYMYARMITIYRDTGQWQKGVKLLREMQQAGVTPDAHVYNVII---------- 429
Query: 136 QDGNIEGATKILEFMRDKTFPISEG-------VFNALIYGHSQANDMASAEGILTMMSQA 188
N G T+ LE R F + +G +N+LI +A A + M
Sbjct: 430 ---NTFGRTRQLEQARIAFFKMQDGGIEPDVVSWNSLIDACCKAGQPLEARKLYYKMVND 486
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASA 248
G P+AQT+ ++ G +H + + + ++ + ++ + + A
Sbjct: 487 GCAPTAQTFNIVIHGLGEHKRWNDVNEMVEEMRSKGMFPNVVTYTTLVDVYAQARLFQDA 546
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLD-IIHA 305
L M + G+ PS Y+ L YA+ G + +L + + +N L+ +I+A
Sbjct: 547 VECLQTMKEDGMGPSPTAYSALANAYAQLGMCEQTLHVLQTMEKENIEINLAMLNLLINA 606
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
+++G + E A+ ++ +AGL TYT LM + +D +
Sbjct: 607 FSMAGRSQ---EAFAVFEYI------------KEAGLTADKITYTTLMKALIRAEKLDEV 651
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 61/302 (20%), Positives = 104/302 (34%), Gaps = 88/302 (29%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTF-------------------------PISEGV--- 161
L+ + C G A+++LE++R+ +F ++E +
Sbjct: 114 LLQELCVSGRSSFASELLEWLRENSFCRTYDVLDSVVIHGYGRERKLHKALEVAEKLGSN 173
Query: 162 -----FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTK 216
+NAL+ ++Q D A L+ M G P +YT ++ +HG +D I T
Sbjct: 174 LQRRGYNALVGAYAQNRDYGKALETLSKMKTLGFPPDVVSYTHVIQA-CRHGVVD-IYTG 231
Query: 217 IPSLKPQSELFLCFSFQLTNLLILVSSDMASA-EGI--LTMMSQAGLEPSAQTYTKLMCG 273
+ + ++ N LI EG+ L + +GL +Y LM
Sbjct: 232 FRLFQEMQAEGVQVDGKVYNDLIFACGQAHKPNEGMFFLEKLQASGLVADRDSYISLMLS 291
Query: 274 YAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
KHG LL +
Sbjct: 292 LGKHGRTAEAEALLEE-------------------------------------------- 307
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDM---DSIRRLLAQNGSSLVNGDYLDIIHALAV 390
M GL P+ + Y L+ GY++ G + D+++ LL G S+ Y +I A A
Sbjct: 308 ---MKWYGLRPNLKAYNTLLGGYSRKGQLQQIDTVKTLLRDTGMSINKITYCLLIDAYAR 364
Query: 391 SG 392
+G
Sbjct: 365 AG 366
>gi|255660902|gb|ACU25620.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 484
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 88/218 (40%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFXVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AEKMTEARS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVL 314
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 109/278 (39%), Gaps = 24/278 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFXVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPG 407
TYT L+ GY +D RL+ + + + + L + E + E S ++
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEM 281
Query: 408 V-GYSADAANHIYHLI-----NKGQIDAAYRIVNTLAR 439
+ Y A N I+ + N G +DAA ++ + R
Sbjct: 282 MDKYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIR 319
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 68/162 (41%), Gaps = 4/162 (2%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFXVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
AE M +EP+ TYT L+ GY +D RL+ +
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEE 245
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 168/417 (40%), Gaps = 45/417 (10%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
T EL D+ YN LL+ L N+ D L ++ ++G V +++ + +I
Sbjct: 174 RTPELGCVPDVFSYNILLK-SLCNQGKSGQADDLLRMMAEG---GTVCSPDVVAYNTVID 229
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ ++G++ A + + M + P ++++++ +A M AE L M G+ P
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 289
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
TY L+ GY+ G ++ QS L + + + A +
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
M+ G P +YT ++ GYA G DM + L+ G + V + +I A A
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC 409
Query: 310 G--------------HGEYIDEVSAIVCFVNIC-FHWLEGPM-----MSQAGLEPSAQTY 349
G HG V+ + +C ++ M M G+ P Y
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469
Query: 350 TKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH----GEYID-EIISKI 404
L+ G+ HG + + L+++ + NG LDI+ ++ + G +D + I +
Sbjct: 470 HCLIQGFCTHGSLLKAKELISE---IMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDL 526
Query: 405 QPGVGYSADAANHIYHLINK-----GQIDAAYRIVNTLARSA---NINGEQLPVGGF 453
VG DA +Y+++ G+++ A R+ + + + N+ G V G+
Sbjct: 527 TVNVGLHPDAV--VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 581
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 141/337 (41%), Gaps = 42/337 (12%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D Y+ L++ + + + ++++ + G+ + V + +I+N C+ G
Sbjct: 463 VP-DKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN------LCKLG 515
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A I + + V+N L+ G+ M A + M AG+EP+ Y
Sbjct: 516 RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYG 575
Query: 199 KLMCGYAKHGDMD---SIKTKI--PSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEG 250
L+ GY K G +D S+ ++ +KP + L+ N++I + A+
Sbjct: 576 TLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY--------NIIIDGLFEAGRTVPAKV 627
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
M+++G+ + TY+ ++ G K+ D L + + V D + + +A
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 687
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
++E + F +I S++GL P A TY+ ++ K G ++ + +
Sbjct: 688 QTRRVEEAKDL--FASI----------SRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFS 735
Query: 371 --QNG-----SSLVNGDYLDIIHALAVSGHGEYIDEI 400
QN S L+N +++ + G Y+ +I
Sbjct: 736 SMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKI 772
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/363 (18%), Positives = 147/363 (40%), Gaps = 27/363 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + ++H FL + + +G + ++V Y S ++ YC++G ++ A +
Sbjct: 261 YNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGY------SAIVDSYCKEGRMDQAKE 314
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I+ M + + A+I G SQA ++ A +L M + G +P+ +YT + G
Sbjct: 315 IVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLC 374
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G+ + + + + Q ++ + ++ A ++ M G P+
Sbjct: 375 QKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPV 434
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQS---GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
L+ + G +D ++ + + G ++ ++ +IH D++ A +
Sbjct: 435 EINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQ------DDIEAAL 488
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVNG 379
++ M + P A TYT ++ K G ++ L + + G
Sbjct: 489 SLLDD---------MYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPV 539
Query: 380 DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLAR 439
Y +IH G E + ++ K+ I L G ++AA +++ + R
Sbjct: 540 TYRTVIHRYGQIGRVEDLLNLLDKMLTRQECRTAFNQVIEKLCTFGNLEAADKLLGKVLR 599
Query: 440 SAN 442
+A+
Sbjct: 600 TAS 602
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 89/215 (41%), Gaps = 18/215 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L++ Y D + ++++ +G P++V+Y ++ C++ I
Sbjct: 187 NVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGF------LCKNRRIR 240
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
++E M D + +N LI+ + A L + G + Y+ ++
Sbjct: 241 EVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIV 300
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL--CFSFQLTNLLIL----VSSDMASAEGILTMM 255
Y K G MD K + +E+F C +T I+ + ++ A +L M
Sbjct: 301 DSYCKEGRMDQAKEIV------NEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQM 354
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
+ G +P+ +YT + G + G+ R ++ S
Sbjct: 355 YKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKAS 389
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 100/241 (41%), Gaps = 39/241 (16%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM--DSIKTKIPS 219
F ++ +S+A + +A +LTMM +AG+EP+ L+C A H + + ++ +
Sbjct: 121 FCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNL-----LVCNTAIHVLVMANMLEKALRF 175
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ---AGLEPSAQTYTKLMCGYAK 276
L+ L + + N LI D+ E + ++S+ G P +Y +M K
Sbjct: 176 LERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCK 235
Query: 277 HGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH--------------GEYIDEVS 319
+ + V ++ + + + D Y +IH L H G +D+V
Sbjct: 236 NRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVG 295
Query: 320 AIVCFVNICFHWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+ C EG M M G P TYT ++ G+++ G++ R++L
Sbjct: 296 YSAIVDSYC---KEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQ 352
Query: 371 Q 371
Q
Sbjct: 353 Q 353
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 12/207 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y A + Y++ S ++ ++ G+ PN+V + LI++YC+ G + A
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC------TGLINEYCKKGKVIEACS 578
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
M D+ + L+ G + + + AE I M G+ P +Y L+ G++
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEP 262
K G+M + + + L + + N+L+ S ++ A+ +L MS GL P
Sbjct: 639 KLGNMQKASSIFDEMVEEG---LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+A TY ++ GY K GD+ RL +
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 114/271 (42%), Gaps = 24/271 (8%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ + ++ + G PN V Y + LI + Q+ A ++L+ M+++ +N
Sbjct: 438 NIVKEMIASGCRPNVVIY------TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
+LI G S+A M A L M + GL+P+A TY + GY + + S + ++
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 224 SEL---FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
L LC L N + + +M+ Q G+ A+TYT LM G K+ +
Sbjct: 552 GVLPNKVLCTG--LINEYCKKGKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDKV 608
Query: 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
D + + + D + + ++G + + A F M +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFS--YGVLINGFSKLGNMQKASSIF----------DEMVEE 656
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
GL P+ Y L+ G+ + G+++ + LL +
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 45/294 (15%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-SKLISKYCQDGNI 140
D Y L+ N+ + ++ +GI P+ +Y LI+ SKL GN+
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL-------GNM 643
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A+ I + M ++ + ++N L+ G ++ ++ A+ +L MS GL P+A TY +
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 201 MCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
+ GY K GD+ + K+ L P S ++ L+ + E +T+
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY--------TTLVDGCCRLNDVERAITIF 755
Query: 256 --SQAGLEPSAQTYTKLMCGYAKHG----DMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
++ G S + L+ K G + + RL+ S + Y +I L
Sbjct: 756 GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYL 815
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
G+ E E+ FH M A L P+ TYT L+ GY K G
Sbjct: 816 CKEGNLEAAKEL----------FH-----QMQNANLMPTVITYTSLLNGYDKMG 854
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 131/344 (38%), Gaps = 58/344 (16%)
Query: 67 EDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS 126
E+ F G+ P D+ Y L+ + + + ++ +G+ PN + Y L+
Sbjct: 612 EEIFREMRGKGIAP-DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 127 NSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMS 186
+C+ G IE A ++L+ M K + + +I G+ ++ D+A A + M
Sbjct: 671 G------FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI--------PSLKPQSELF-LCFSFQLTNL 237
GL P + YT L+ G + D++ T S P + L F F T L
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 238 LILV-----------------------------SSDMASAEGILTMMSQAGLEPSAQTYT 268
V ++ +A+ + M A L P+ TYT
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 269 KLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFV 325
L+ GY K G + + ++ ++ + D Y II+A G + + V
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM------TTKALVLV 898
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ F G + S T L+ G+AK G+M+ +++
Sbjct: 899 DQMF----AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM 938
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 116/289 (40%), Gaps = 25/289 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VPL + Y+ L+ + L +++S G+ + TY S LI +
Sbjct: 274 VPLKYT-YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY------SLLIDGLLKGR 326
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N + A ++ M I +++ I S+ M A+ + M +GL P AQ Y
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ GY + ++ + +K ++ + +++ + S D+ A I+ M +
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
G P+ YT L+ + ++ R+L + + D Y +I L+ + +
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS---KAKRM 503
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
DE + + M + GL+P+A TY + GY + + S
Sbjct: 504 DEARSFLV------------EMVENGLKPNAFTYGAFISGYIEASEFAS 540
>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
[Oryza sativa Japonica Group]
Length = 580
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 148/370 (40%), Gaps = 31/370 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V ++ YNA+L V L + ++++ G+ +R ++ + +I+ YC+ G
Sbjct: 176 VAMNTHVYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSF------NTVIALYCRKG 229
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
A + E M ++ +N+LI+G + + A +L M+ AG+ P TYT
Sbjct: 230 MQYEAMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYT 289
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ GY + GD++ ++ L ++ + M +L M +
Sbjct: 290 TLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDER 349
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
++ T L+ Y K GDM S V+R + +SG L Y ++H + +
Sbjct: 350 KVQADHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFC---KAKEL 406
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQN 372
DE + F M AG P+ + ++ G + ++ + L +
Sbjct: 407 DEAKEAL------FE------MMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKR 454
Query: 373 GSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADA---ANHIYHLINKGQIDA 429
G Y +I L G + + +++Q G G AD A + G+ A
Sbjct: 455 GFPPDKAVYRSLIRRLCKKGFIDLAGNVFNEMQ-GKGLEADCLVYATLACAYLTAGKPVA 513
Query: 430 AYRIVNTLAR 439
A I+N +A+
Sbjct: 514 ALDILNEMAK 523
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 128/297 (43%), Gaps = 28/297 (9%)
Query: 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM 185
++S L++ + A K+ + M ++ V+NA+++ +A D A AE ++T M
Sbjct: 147 ASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAMLHVCLKAGDAALAESLMTRM 206
Query: 186 SQAGLEPSAQTYTKLMCGYAKHG---DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS 242
AG+ ++ ++ Y + G + ++ ++ + ++++ S +
Sbjct: 207 DAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVKADVVTWNSLIHG---LCKE 263
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNG--DY 299
+ A +L M+ AG+ P TYT L+ GY + GD++ +L + ++ G Y
Sbjct: 264 RRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKLRGEMEAMGMLPGVATY 323
Query: 300 LDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
I+ L G + EV+ ++ M + ++ T L+ Y K
Sbjct: 324 NAILRKLCEDGK---MKEVNVLL------------NEMDERKVQADHVTCNTLINAYCKR 368
Query: 360 GDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSAD 413
GDM S ++R + ++G L Y ++H + + E + ++ G G+S +
Sbjct: 369 GDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMM-GAGFSPN 424
>gi|222613030|gb|EEE51162.1| hypothetical protein OsJ_31934 [Oryza sativa Japonica Group]
Length = 404
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 18/238 (7%)
Query: 83 ISHYNALLRVYLDNE---HTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
++ YN+L+ Y + + L ++ GI P VT+ LI+ YC++ N
Sbjct: 161 VATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING------YCKNSN 214
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
A ++ E M+ + S +N+LI G + ++ M GL P+ T+
Sbjct: 215 TAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGC 274
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MS 256
++ G+ K G M I + +E + + N+LI V + E + + M+
Sbjct: 275 VLKGFCKKGMMADANDWIDGM---TERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMA 331
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
+ G+ P+ TY L+ G+++ GD S LL + + D Y +I AL G
Sbjct: 332 KKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 389
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 29/234 (12%)
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDM 245
GL PS TY L+ GY K G ++ LK E + + +LI +S+
Sbjct: 156 GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNT 215
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS---GSSLVNGDYLDI 302
A+A + M Q G+ S TY L+ G G ++ +L+ + G S + +
Sbjct: 216 AAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCV 275
Query: 303 IHALAVSGH----GEYID-------EVSAIVCFVNICFHWLEGPM---------MSQAGL 342
+ G ++ID E ++ + I + G M M++ G+
Sbjct: 276 LKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGI 335
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGH 393
P+ TY L+ G+++ GD S LL + + D Y +I AL G
Sbjct: 336 SPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 389
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 12/207 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y A + Y++ S ++ ++ G+ PN+V + LI++YC+ G + A
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC------TGLINEYCKKGKVIEACS 578
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
M D+ + L+ G + + + AE I M G+ P +Y L+ G++
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEP 262
K G+M + + + L + + N+L+ S ++ A+ +L MS GL P
Sbjct: 639 KLGNMQKASSIFDEMVEEG---LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+A TY ++ GY K GD+ RL +
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 114/271 (42%), Gaps = 24/271 (8%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ + ++ + G PN V Y + LI + Q+ A ++L+ M+++ +N
Sbjct: 438 NIVKEMIASGCRPNVVIY------TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
+LI G S+A M A L M + GL+P+A TY + GY + + S + ++
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 224 SEL---FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
L LC L N + + +M+ Q G+ A+TYT LM G K+ +
Sbjct: 552 GVLPNKVLCTG--LINEYCKKGKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDKV 608
Query: 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
D + + + D + + ++G + + A F M +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFS--YGVLINGFSKLGNMQKASSIF----------DEMVEE 656
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
GL P+ Y L+ G+ + G+++ + LL +
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 45/294 (15%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-SKLISKYCQDGNI 140
D Y L+ N+ + ++ +GI P+ +Y LI+ SKL GN+
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL-------GNM 643
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A+ I + M ++ + ++N L+ G ++ ++ A+ +L MS GL P+A TY +
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 201 MCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
+ GY K GD+ + K+ L P S ++ L+ + E +T+
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY--------TTLVDGCCRLNDVERAITIF 755
Query: 256 --SQAGLEPSAQTYTKLMCGYAKHG----DMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
++ G S + L+ K G + + RL+ S + Y +I L
Sbjct: 756 GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYL 815
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
G+ E E+ FH M A L P+ TYT L+ GY K G
Sbjct: 816 CKEGNLEAAKEL----------FH-----QMQNANLMPTVITYTSLLNGYDKMG 854
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 131/344 (38%), Gaps = 58/344 (16%)
Query: 67 EDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS 126
E+ F G+ P D+ Y L+ + + + ++ +G+ PN + Y L+
Sbjct: 612 EEIFREMRGKGIAP-DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 127 NSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMS 186
+C+ G IE A ++L+ M K + + +I G+ ++ D+A A + M
Sbjct: 671 G------FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI--------PSLKPQSELF-LCFSFQLTNL 237
GL P + YT L+ G + D++ T S P + L F F T L
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 238 LILV-----------------------------SSDMASAEGILTMMSQAGLEPSAQTYT 268
V ++ +A+ + M A L P+ TYT
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 269 KLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFV 325
L+ GY K G + + ++ ++ + D Y II+A G + + V
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM------TTKALVLV 898
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ F G + S T L+ G+AK G+M+ +++
Sbjct: 899 DQMF----AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM 938
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 116/289 (40%), Gaps = 25/289 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VPL + Y+ L+ + L +++S G+ + TY S LI +
Sbjct: 274 VPLKYT-YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY------SLLIDGLLKGR 326
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N + A ++ M I +++ I S+ M A+ + M +GL P AQ Y
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ GY + ++ + +K ++ + +++ + S D+ A I+ M +
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
G P+ YT L+ + ++ R+L + + D Y +I L+ + +
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS---KAKRM 503
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
DE + + M + GL+P+A TY + GY + + S
Sbjct: 504 DEARSFLV------------EMVENGLKPNAFTYGAFISGYIEASEFAS 540
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 123/294 (41%), Gaps = 30/294 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI Y ++ H + L+++ S G++PN V Y ++ C E
Sbjct: 265 DIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKG------ICSADRWE 318
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M K P+ + FN L+ Q + +L M + G P TYT ++
Sbjct: 319 KAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVI 378
Query: 202 CGYAKHGDMDS---IKTKIPS--LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
G+ K G +D + +PS KP + S+ + + + AE +++ M
Sbjct: 379 NGFCKEGLIDEAVMLLKNMPSCGCKPNT-----ISYTIVLKGLCSTERWVDAEELMSRMI 433
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAVSGHGEYI 315
Q G P+ T+ ++ K G ++ LL Q LVNG D+I ++ + G G+
Sbjct: 434 QQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQ---MLVNGCNPDLISYSTVIDGLGKAG 490
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
A+ +N+ M G+ P+ TY+ + A+ G +D + ++
Sbjct: 491 KTEEALE-LLNV---------MINKGITPNVITYSSMAFALAREGRIDKVIQMF 534
Score = 49.3 bits (116), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 119/301 (39%), Gaps = 32/301 (10%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+ PLD +N L+ + N + L ++ G P+ +TY + +I+ +C++
Sbjct: 331 NCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITY------TTVINGFCKE 384
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G I+ A +L+ M + + ++ G AE +++ M Q G P+ T+
Sbjct: 385 GLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTF 444
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC----FSFQLTNLLILVSSDMASAEGILT 253
++ K G ++ I LK Q + C S+ + + A +L
Sbjct: 445 NTIINFLCKKG---LVEQAIELLK-QMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLN 500
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSG 310
+M G+ P+ TY+ + A+ G +D V ++ + + D Y +I +L
Sbjct: 501 VMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRR 560
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+ + A M G P+ TYT L+ G A G + + LL+
Sbjct: 561 ETDLAIDFLA---------------YMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLS 605
Query: 371 Q 371
+
Sbjct: 606 E 606
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 149/364 (40%), Gaps = 74/364 (20%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEG---VFNALIYGHSQA----------NDMA 176
+I+ C G ++ LE +R E +NA++ G A ++M
Sbjct: 192 VINAICDQGCVDEG---LEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMV 248
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD---MDSIKTKIPS--LKPQSELFLCFS 231
L+ M+Q G P + Y ++ G K G + I +++PS LKP +C++
Sbjct: 249 KVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPN---VVCYN 305
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG 291
L I + AE +LT M Q T+ L+ + ++G +D V LL Q
Sbjct: 306 TVLKG--ICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQ-- 361
Query: 292 SSLVNGDYLDII-HALAVSGHGE--YIDE-----------------VSAIVCFVNICF-- 329
L +G D+I + ++G + IDE +S + +C
Sbjct: 362 -MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTE 420
Query: 330 HWLEG----PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDII 385
W++ M Q G P+ T+ ++ K G ++ LL Q LVNG D+I
Sbjct: 421 RWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQ---MLVNGCNPDLI 477
Query: 386 -HALAVSGHG---------EYIDEIISK-IQPGV-GYSADAANHIYHLINKGQIDAAYRI 433
++ + G G E ++ +I+K I P V YS+ A + L +G+ID ++
Sbjct: 478 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMA----FALAREGRIDKVIQM 533
Query: 434 VNTL 437
+ +
Sbjct: 534 FDNI 537
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 140/337 (41%), Gaps = 52/337 (15%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N +L + ++H + K+E +GI+PN L++ + LI+ +CQ G+I A
Sbjct: 65 FNKILGSLVKSKHYHTVLYLSQKMEFRGIKPN------LVNCNILINSFCQLGHIPSAFS 118
Query: 146 ILEFMRDKTFPISEGVFNALIYG----------HSQANDMASAEGILTMMSQAGLEPSAQ 195
+L + + + N LI G H + A + M + P
Sbjct: 119 VLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVY 178
Query: 196 TYTKLMCGYAKHGDMDSIKT-----KIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
T+T L+ G+ K G + K I +KP + L + LV + A+
Sbjct: 179 TFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTY----NSLMDGYFLVKQ-VNKAKS 233
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALA 307
I M+Q G+ P Q+Y+ L+ G+ K MD LL + + + Y +I L
Sbjct: 234 IFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLC 293
Query: 308 VSGHGEY----IDEV------SAIVCFVNI----CF-HWLEGPM-----MSQAGLEPSAQ 347
SG Y +DE+ IV + +I C H ++ + M G++P+
Sbjct: 294 KSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMY 353
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDI 384
TYT L+ G + G ++ R++ LV G L++
Sbjct: 354 TYTILIKGLCQSGKLEDARKVFE---DLLVKGHNLNV 387
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 137/330 (41%), Gaps = 62/330 (18%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D K+ + I P+ T+ + L+ +C++G ++ A +L M + +N
Sbjct: 163 DLFNKMILENINPDVYTF------TILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYN 216
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---------K 214
+L+ G+ + A+ I M+Q G+ P Q+Y+ L+ G+ K MD K
Sbjct: 217 SLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHK 276
Query: 215 TKIPSLKPQSELF--LCFSFQLTNLLILV------------------------SSDMASA 248
IP++ S L LC S +++ L LV + + +A
Sbjct: 277 QIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNA 336
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI-IHALA 307
+LT M G++P+ TYT L+ G + G ++ R++ LV G L++ + +
Sbjct: 337 IALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFE---DLLVKGHNLNVYTYTVM 393
Query: 308 VSGHGE--YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
+ G + DE ++ M G P+A+TY ++ K + +
Sbjct: 394 IQGFCDKGLFDEALTLL------------SKMEDNGCIPNAKTYEIIILSLFKKDENEMA 441
Query: 366 RRLLAQNGSSLVNGDYL---DIIHALAVSG 392
+LL + + +G D+I ++ V+G
Sbjct: 442 EKLLCEMIETNFDGRVALTNDLIASIWVTG 471
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 107/239 (44%), Gaps = 9/239 (3%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
+L V DI Y+ L+ + + + L ++ + I PN VTY S LI
Sbjct: 239 AQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTY------SSLIDGL 292
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C+ G I A K+++ M D+ P + +++++ + + + +A +LT M G++P+
Sbjct: 293 CKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNM 352
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TYT L+ G + G ++ + L + +++ + A +L+
Sbjct: 353 YTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSK 412
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL---DIIHALAVSG 310
M G P+A+TY ++ K + + +LL + + +G D+I ++ V+G
Sbjct: 413 MEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTG 471
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 24/223 (10%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
+ V LD+S YN L+ + T + +GI + +TY LI YC
Sbjct: 535 MGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHG------YCI 588
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+++ A + M + + +N L+ G S A + A G++ M + GL P+A T
Sbjct: 589 SSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATT 648
Query: 197 YTKLMCGYAKHGDMDSI---------KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
Y L+ G+ K G+M K +P + + L CF+ M+
Sbjct: 649 YDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFA---------KGKKMSQ 699
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
A+ ++ M G+ P++ TY L+CG+ K + + L +S
Sbjct: 700 AKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 102/261 (39%), Gaps = 73/261 (27%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+L G++ + TY LIS +C+ G I AT + + M K +NALI+
Sbjct: 531 QLVGMGVKLDLSTYNTLIST------FCRLGMIRRATLVFKDMMGKGILADIITYNALIH 584
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G+ ++ + A + + M G+ P+ +TY L+ G +
Sbjct: 585 GYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLS---------------------- 622
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + A G++ M + GL P+A TY L+ G+ K G+M +L
Sbjct: 623 -------------AARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKL- 668
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA------- 340
Y ++I V Y +S CF +G MSQA
Sbjct: 669 -----------YCEMITKGFVPKTRTYNVLIS---CFA-------KGKKMSQAKELMQEM 707
Query: 341 ---GLEPSAQTYTKLMCGYAK 358
G+ P++ TY L+CG+ K
Sbjct: 708 QVRGIPPNSSTYDILICGWYK 728
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 128/302 (42%), Gaps = 28/302 (9%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
++ + H+N L+ Y N + L ++++G P+ VTY L++ +C+
Sbjct: 12 EIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNG------FCKI 65
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G++ A K++ + + + LI + ++ + A + M+ L P TY
Sbjct: 66 GDLFTAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTY 125
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
T +M G K G ++ K+ ++ + FS+ + ++A A + M
Sbjct: 126 TCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVV 185
Query: 258 AGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
G+ YT LM G K G + + + ++L + SLV + ++ + GH +
Sbjct: 186 RGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLE--ESLVPN---CVTYSALIDGHCKL 240
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG----DMDSIRRLLA 370
D VN L+ M + + P+ Y+ ++ GY K G MD +R+++
Sbjct: 241 GD--------VNKGELLLQE--MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQ 290
Query: 371 QN 372
+N
Sbjct: 291 RN 292
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 120/293 (40%), Gaps = 41/293 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D+ Y ++ + ++E G+ PNR +Y + LI ++G
Sbjct: 119 VP-DVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSY------ATLIDSLFKEG 171
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A + M + V+ AL+ G +A +AE + ++ + L P+ TY+
Sbjct: 172 NVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYS 231
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS-SDMASAEGILT---- 253
L+ G+ K GD++ + + ++ + +F N+++ S D + +G+L
Sbjct: 232 ALIDGHCKLGDVNKGELLLQEME-EKHIF-------PNVIVYSSIVDGYTKKGLLNEAMD 283
Query: 254 ---MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS-SLVNGDYL--DIIHALA 307
M Q + P+ Y L+ GY K L + S L +++ ++ L
Sbjct: 284 VMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLK 343
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
SG E DE L MMS+ GL P YT +M G+ K G
Sbjct: 344 RSGRMEEADE--------------LFKDMMSR-GLLPDRVNYTSMMDGFFKAG 381
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 120/309 (38%), Gaps = 67/309 (21%)
Query: 71 SVHTG--ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNS 128
S HTG +L + D + +N ++ Y + + L +++S G++PN +T +
Sbjct: 422 SFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITC------N 475
Query: 129 KLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ- 187
L+ + C G IE +L M F + A++ S++ A+ IL M Q
Sbjct: 476 ILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSR---RADVILHMHDQL 532
Query: 188 --AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVS 242
G++ TY L+ + + G + + + L ++ N LI +S
Sbjct: 533 VGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITY---NALIHGYCIS 589
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI 302
S + A + + M G+ P+ +TY L+ G S RL+ ++ + LVN
Sbjct: 590 SHLKKAFAVHSQMLTEGVSPNVETYNILLGGL-------SAARLIKEA-AGLVN------ 635
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
M + GL P+A TY L+ G+ K G+M
Sbjct: 636 ---------------------------------QMKERGLVPNATTYDILVSGHGKIGNM 662
Query: 363 DSIRRLLAQ 371
+L +
Sbjct: 663 KECVKLYCE 671
>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
Length = 826
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 115/300 (38%), Gaps = 60/300 (20%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
G+ VP +I YN L+ Y N +L+ +G P TY +I+ +
Sbjct: 230 GKGCVP-NIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTY------GAMINAF 282
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C+ G E K+L M+++ +S +FN +I + A + M ++G EP
Sbjct: 283 CKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDM 342
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY L+ G G + AE +L
Sbjct: 343 ATYNTLINGSCSKG-----------------------------------KVREAEELLEH 367
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGH 311
+ GL P+ +YT L+ ++K+G+ LL ++ G +L Y ++H L V+G
Sbjct: 368 AIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAG- 426
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
EV + + M + G+ P A Y LM G K G + ++LL +
Sbjct: 427 -----EVDVALTVRD---------KMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVE 472
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/345 (19%), Positives = 142/345 (41%), Gaps = 53/345 (15%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
G D V E + + + +N ++ + D + + G EP+ TY
Sbjct: 286 GKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATY 345
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEF-MRDKTFPISEGVFNALIYGHSQANDMASAEG 180
LI+ S C G + A ++LE +R FP ++ + LI+ S+ + A
Sbjct: 346 NTLINGS------CSKGKVREAEELLEHAIRRGLFP-NKFSYTPLIHAFSKNGEYVRASE 398
Query: 181 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKI--PSLKPQSELFLCFSFQLT 235
+L MS+ G Y L+ G G++D +++ K+ + P + ++
Sbjct: 399 LLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIY-------- 450
Query: 236 NLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
N+L + +A+ +L M + P A L+ G+ +HG++D ++L +
Sbjct: 451 NVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIE 510
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP----------------- 335
++ ++ +A+ + G+ +Y A++CF + F+ + P
Sbjct: 511 RGIDTSVVEC-NAM-IKGYCKYGMMNDALLCFKRM-FNGVHSPDEFTYSTIIDGYVKQND 567
Query: 336 ---------MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+M + +P+ T+T L+ G+ ++GD++ ++ +
Sbjct: 568 LRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEE 612
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 87/229 (37%), Gaps = 33/229 (14%)
Query: 72 VHTGELDVPL-------------DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNR 118
V GE+DV L D + YN L+ + L ++ Q + P+
Sbjct: 423 VVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDA 482
Query: 119 VTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASA 178
N+ L+ + + GN++ A K+ + ++ S NA+I G+ + M A
Sbjct: 483 FV------NATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDA 536
Query: 179 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI-----PSLKPQSELFLCFSFQ 233
M P TY+ ++ GY K D+ + KP F
Sbjct: 537 LLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTF------ 590
Query: 234 LTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
T+L+ + D+ AE + M G EP+ TYT L+ + K G +
Sbjct: 591 -TSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKL 638
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 92/443 (20%), Positives = 171/443 (38%), Gaps = 63/443 (14%)
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G +E A K+ + M D+ + + G + + ++ G P+ Y
Sbjct: 181 GKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFY 240
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
L+ GY K+GD++ LK + L ++ + + +L M +
Sbjct: 241 NTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKE 300
Query: 258 AGLEPSAQTYTKLMCGYAKHG----DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
GL S Q + ++ KHG D+VR ++ +SG Y +I+ G
Sbjct: 301 RGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMI-ESGCEPDMATYNTLINGSCSKGKVR 359
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL---A 370
+E+ LE + + GL P+ +YT L+ ++K+G+ LL +
Sbjct: 360 EAEEL-------------LEHAI--RRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMS 404
Query: 371 QNGSSLVNGDYLDIIHALAVSGHGEYIDEIISK-IQPGVGYSADAANHIYH-LINKGQID 428
+ G +L Y ++H L V+G + + K ++ G+ A+ N + L KG+
Sbjct: 405 ERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFP 464
Query: 429 AAYRIV-----NTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKG 483
AA +++ + A +N V GF +RH + D A ++ L +
Sbjct: 465 AAKQLLVEMLDQNVTPDAFVNATL--VDGF-IRHG----------NLDEAKKLFQLTIER 511
Query: 484 QIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLH-PRA 542
ID + N + + G+ M+ D +L C + +H P
Sbjct: 512 GIDTSVVECNAM------------IKGYCKYGMMN-----DALL--CFKRMFNGVHSPDE 552
Query: 543 FNLAVLIKAHVLKEDYTGAVETF 565
F + +I +V + D GA+ F
Sbjct: 553 FTYSTIIDGYVKQNDLRGALRMF 575
>gi|255660932|gb|ACU25635.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 484
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 7/213 (3%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I Y+AL +V + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYDALFKVISRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+++ +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKNREITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
TYT L+ GY +D + +K ++ + + M+ A IL M
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGYGIKANAITYSTLLPGLCNAEKMSEARSILKEM 281
Query: 256 SQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
+ P+ + + +L+ G K G++D+ +L
Sbjct: 282 VDKYIAPTDNSIFMRLISGQCKAGNLDAAADVL 314
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/236 (18%), Positives = 90/236 (38%), Gaps = 13/236 (5%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y G ++ + K+ + M + + ++AL S+ A+ M G
Sbjct: 86 MIDSYGNGGIVQESVKLFQKMDELGVERTIKSYDALFKVISRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+EP+ T+ ++ G+ G +++ +K + ++ M AE
Sbjct: 146 IEPTRHTFNIMIWGFFLSGKVETANRFFEDMKNREITPDVITYNTMINGYYRVKKMEEAE 205
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
M +EP+ TYT L+ GY +D RL+ + + + + L
Sbjct: 206 KYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKANAITYSTLLPGL 265
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT-YTKLMCGYAKHGDMDS 364
+ E + E +I+ M + P+ + + +L+ G K G++D+
Sbjct: 266 CNAEKMSEARSIL------------KEMVDKYIAPTDNSIFMRLISGQCKAGNLDA 309
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 35/303 (11%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMEDANELFDEMLNNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNIC 328
G+ K+G +D + Q S ++ D Y +I+ L G + +++
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLT--------- 299
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDII 385
MS GL+P TYT L+ G K G +++ R+ + + L + Y +I
Sbjct: 300 ------DEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALI 353
Query: 386 HALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARS 440
L G + + E++S ++P +G N KG + +++ + R
Sbjct: 354 SGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLLKEMQRD 410
Query: 441 ANI 443
+
Sbjct: 411 GYV 413
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ + G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ + MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K G +++ + + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +LL +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 119/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + G+ P+ V++ L++ Y
Sbjct: 129 EYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ + M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K G +++ R+ + + L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 131/339 (38%), Gaps = 65/339 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ +Y + ++E G+ P+ VTY LI +C++G +
Sbjct: 231 DLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYG------FCREGRMR 284
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + T P + + LI G+ + ND+ A + +M GL P TY ++
Sbjct: 285 EALRLFREINGAT-P-NHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSIL 342
Query: 202 ---CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
C K D + + ++ K + + C + L N + DM SA + M +A
Sbjct: 343 RKLCEEGKIKDANRLLNEMSERKVEPDNVTCNT--LINAYCKIG-DMGSAMKVKKKMLEA 399
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
GL+P T+ L+ G+ K ++DS + L +
Sbjct: 400 GLKPDQFTFKALIHGFCKLHEVDSAKEFLFE----------------------------- 430
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSS 375
M AG PS TY+ L+ Y + +++ RL L++ G
Sbjct: 431 ------------------MLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLF 472
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADA 414
+ Y +I L E + I + +Q G G D+
Sbjct: 473 VDISVYRALIRRLCKIDKIESAERIFTLMQ-GKGMKGDS 510
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 98/242 (40%), Gaps = 14/242 (5%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI C+ G++E A ++L M + +N LI + + A GI M + G
Sbjct: 203 LIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGG 262
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+ P TY L+ G+ + G M + + + ++ + + +D+ A
Sbjct: 263 VSPDIVTYNSLIYGFCREGRMREALRLFREINGATPNHVTYTTLIDGYCRV--NDLEEAL 320
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+ +M GL P TY ++ + G + RLL + V D ++ ++
Sbjct: 321 RLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPD--NVTCNTLIN 378
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ + D SA+ M +AGL+P T+ L+ G+ K ++DS + L
Sbjct: 379 AYCKIGDMGSAMKV----------KKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFL 428
Query: 370 AQ 371
+
Sbjct: 429 FE 430
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 94/260 (36%), Gaps = 20/260 (7%)
Query: 126 SNSKLISK----YCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
SNS+++S Y + A ++ E MR F L+ ++A +
Sbjct: 125 SNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKV 184
Query: 182 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV 241
M + G+ P+ + L+ K GD++ + + ++ + F++ L
Sbjct: 185 YKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCK 244
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD 301
A GI M + G+ P TY L+ G+ + G M RL + +NG
Sbjct: 245 KGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE-----ING---- 295
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLE-GPMMSQAGLEPSAQTYTKLMCGYAKHG 360
A H Y + C VN L +M GL P TY ++ + G
Sbjct: 296 -----ATPNHVTYTTLIDG-YCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEG 349
Query: 361 DMDSIRRLLAQNGSSLVNGD 380
+ RLL + V D
Sbjct: 350 KIKDANRLLNEMSERKVEPD 369
>gi|389744544|gb|EIM85727.1| hypothetical protein STEHIDRAFT_99442 [Stereum hirsutum FP-91666
SS1]
Length = 1160
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 120/292 (41%), Gaps = 24/292 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I HY+ L+ + + ++L + G P++ Y LI + G +E
Sbjct: 511 NIIHYSTLILAHANARDFVGMNNWLQTMIDAGFAPDQHVY------GLLIQSFASRGELE 564
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
I++ MR+ S + +I S+ D +AE + + G+ P LM
Sbjct: 565 TVASIMDQMREAGLRPSAATYTTVISMLSKRKDPVAAEAMYKRAIREGIFPDRHMIAALM 624
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL----ILVSSDMASAEGILTMMSQ 257
+ + G + L + L + N+L +L+S+ G+ + M +
Sbjct: 625 TAHMEAGSYRGVIRAFDYLVSSKDRHLRPRIGVYNILLKSYVLLSAPFEIVSGVFSRMEK 684
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIH-ALAVSGHGE 313
AGL P+ T+ LM G M+ ++ L + + G ++++ L +SG+
Sbjct: 685 AGLRPTVHTFAILMQAACVAGRMEIAVNIFNELERLAAHWETGLHINVYALTLLMSGYLR 744
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
D++ A + MM + G++P++ TY ++ YA+ G +S+
Sbjct: 745 LGDKIKAKEVY----------DMMLERGIQPTSMTYGSILRAYAQEGTEESL 786
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 162/378 (42%), Gaps = 65/378 (17%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFM---RDKTFPISEGVFNALIYG 168
+GI P+R +I+ L++ + + G+ G + +++ +D+ GV+N L+
Sbjct: 611 EGIFPDR----HMIA--ALMTAHMEAGSYRGVIRAFDYLVSSKDRHLRPRIGVYNILLKS 664
Query: 169 H---SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKP 222
+ S ++ S G+ + M +AGL P+ T+ LM G M+ +I ++ L
Sbjct: 665 YVLLSAPFEIVS--GVFSRMEKAGLRPTVHTFAILMQAACVAGRMEIAVNIFNELERLAA 722
Query: 223 QSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
E L + LL+ L D A+ + MM + G++P++ TY ++ YA+ G
Sbjct: 723 HWETGLHINVYALTLLMSGYLRLGDKIKAKEVYDMMLERGIQPTSMTYGSILRAYAQEGT 782
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM--- 336
+S+ L + SL++ + D A Y +I V L+ P
Sbjct: 783 EESLE-LAKEFLKSLMSSEPKDRTWLYAAGSQRGY----ESIYAPVMAQLGRLQRPEDVE 837
Query: 337 -----MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ----------------NGSS 375
+ +AG EP+ T L+ Y G++ ++R++ +Q + +
Sbjct: 838 DYFQEIIEAGGEPTLPLLTLLLNAYRVVGNIPALRQVWSQILRLGLRHAQVDSLFASSTD 897
Query: 376 LVNGDYLDI--------------IHALAVSGHGEYIDEIISKIQP-GVGYSADAANH-IY 419
LD+ I AL+V+G+ + E+ ++++ G + + NH +
Sbjct: 898 SSERPRLDLQRQANVLCVPLSIYIDALSVAGYHDDAAEVWAEVKSHGFAFDSHNWNHLVV 957
Query: 420 HLINKGQIDAAYRIVNTL 437
L+ G+ + A+++V +
Sbjct: 958 VLVRAGEPERAFQVVERV 975
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 13/143 (9%)
Query: 86 YNALLRVYLDNEHTFS-PTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
YN LL+ Y+ F + +++E G+ P T+ + L+ C G +E A
Sbjct: 658 YNILLKSYVLLSAPFEIVSGVFSRMEKAGLRPTVHTF------AILMQAACVAGRMEIAV 711
Query: 145 KIL-EFMR-----DKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
I E R + I+ L+ G+ + D A+ + MM + G++P++ TY
Sbjct: 712 NIFNELERLAAHWETGLHINVYALTLLMSGYLRLGDKIKAKEVYDMMLERGIQPTSMTYG 771
Query: 199 KLMCGYAKHGDMDSIKTKIPSLK 221
++ YA+ G +S++ LK
Sbjct: 772 SILRAYAQEGTEESLELAKEFLK 794
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 150/359 (41%), Gaps = 28/359 (7%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L +P ++ N LL + FL K+ G EP+ VT+ L++ +C+
Sbjct: 110 LGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNG------FCR 163
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+ A + + M + + ++N +I G ++ + +A +L M + G+ P T
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT 223
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL-CFSFQLTNLLILVSSDMASAEGILTMM 255
Y L+ G G S T++ S + E++ F+F + ++ AE M
Sbjct: 224 YNSLISGLCSSGRW-SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAVSGHGEY 314
+ L+P TY+ L+ G + +D + G + G + D++ +++ ++G+ +
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMF---GFMVSKGCFPDVVTYSILINGYCKS 339
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM---DSIRRLLAQ 371
+ F MSQ G+ + TYT L+ GY + G + + I R +
Sbjct: 340 KKVEHGMKLFCE----------MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF 389
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAA 430
G Y ++H L +G E I++ +Q G AD Y++I +G A
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKN-GMDADIVT--YNIIIRGMCKAG 445
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 128/318 (40%), Gaps = 40/318 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ ++ + D L ++E GI P+ VTY LIS C G AT+
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG------LCSSGRWSDATR 242
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
++ M + FNALI + ++ AE M + L+P TY+ L+ G
Sbjct: 243 MVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLC 302
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLIL----VSSDMASAEGILTMMSQAGLE 261
+ +D + + + CF +T +++ S + + MSQ G+
Sbjct: 303 MYSRLDEAEEMFGFMVSKG----CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSG-------- 310
+ TYT L+ GY + G ++ + + V+ + Y ++H L +G
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVI 418
Query: 311 ------HGEYIDEVSAIVCFVNICF------HWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+G D V+ + +C W ++ GL P TYT +M G K
Sbjct: 419 LADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYK 478
Query: 359 HG---DMDSIRRLLAQNG 373
G + D++ R + ++G
Sbjct: 479 KGLRREADALFRKMKEDG 496
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 158/423 (37%), Gaps = 49/423 (11%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
+DI Y A++ N+ + K+ + G P TY L++ C+ G +
Sbjct: 163 IDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNG------LCKMGRL 216
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A +L + D + +LI G + A + M+ GL YT L
Sbjct: 217 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTAL 276
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ G + G + + ++ Q + + + + + +A I M GL
Sbjct: 277 IRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGL 336
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
P+ Y+ L+ G K MD +LAQ + D Y +I L SG +
Sbjct: 337 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG------D 390
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
V A F + M +AG +P TY L+ G+ K G+ D+ + SS
Sbjct: 391 VEAARAFFD---------EMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHC 441
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAY---RIV 434
+ + V +G I + + Q A+ + H+ +G ++ +V
Sbjct: 442 SPN---------VVTYGTLISGLCKRRQL-----TKASLYFQHMKERGCPPDSFVYSSLV 487
Query: 435 NTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 494
+ L +S + G G L M ++ GV S I+HL ++D A + N
Sbjct: 488 DGLCKSGKLEG-----GCMLFDEMERS---GVANSQTRTRLIFHLCKANRVDEAVSLFNA 539
Query: 495 LAR 497
+ +
Sbjct: 540 IRK 542
>gi|255660908|gb|ACU25623.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 481
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 151/411 (36%), Gaps = 74/411 (18%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V + Y+AL +V L + K+ S+GIEP R + LI +
Sbjct: 108 ELGVERTLKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRXXFNVLIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
TYT L+ GY +D +L+ E M
Sbjct: 222 TYTTLIKGYVSVDQVDD------ALRLXEE-----------------------------M 246
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV----NGDYLDIIHALAVSGH 311
G++P+A TY+ L+ G M R +L + + N ++ +I + SGH
Sbjct: 247 KGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYLAPTDNSIFMRLITSQCTSGH 306
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL-- 369
+D S ++ M + + A Y L+ + K G D +LL
Sbjct: 307 ---LDAASDVL------------KAMIRLSVPTEAGHYGVLIENFCKXGQYDQAVKLLDK 351
Query: 370 ---------AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISK-IQPGVGYSADAANHIY 419
Q+ L Y +I L +G + ++ + ++ GV I
Sbjct: 352 LIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAETLVRQLLKLGVQDPTALNTLIR 411
Query: 420 HLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSA 470
+G D+A+ ++ + R ++ E+ LV+ +K N+P +A
Sbjct: 412 GHSQEGSPDSAFELLKIMLRR-KVDSEKSAYNS-LVQSYLKRNEPADAKAA 460
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 108/278 (38%), Gaps = 24/278 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIK--TKIPSLKPQSELF 227
+A+ + A IL M + GLE + ++ Y K G + +S+K K+ L + L
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKQGIVQESVKLFQKMEELGVERTLK 116
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
S+ +IL A+ M G+EP+ + L+ G+ G +++ R
Sbjct: 117 ---SYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRXXFNVLIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPG 407
TYT L+ GY +D RL + + + + L + E + E S ++
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEM 281
Query: 408 V-GYSADAANHIYHLI-----NKGQIDAAYRIVNTLAR 439
V Y A N I+ + G +DAA ++ + R
Sbjct: 282 VDKYLAPTDNSIFMRLITSQCTSGHLDAASDVLKAMIR 319
>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g21222; AltName: Full=SNF1-like protein kinase AtC401
gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
Length = 831
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 152/368 (41%), Gaps = 50/368 (13%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ +H S ++K+E G++P+ + + +I+ S + GN++ A K
Sbjct: 357 YTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS------ESGNLDQAMK 410
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM-SQAGLEPSAQTYTKLM--- 201
I E M++ + FN LI G+ + + + +L MM L+P+ +T L+
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 470
Query: 202 CGYAKHGDMDSIKTKIPS--LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
C K + +I K+ S +KP F L + S + + I+ M
Sbjct: 471 CNQRKIEEAWNIVYKMQSYGVKPDVVTF----NTLAKAYARIGSTCTAEDMIIPRMLHNK 526
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG-----------SSLVNGDYLDIIHALAV 308
++P+ +T ++ GY + G M+ R + +SL+ G +L+I +
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG-FLNIND---M 582
Query: 309 SGHGEYIDEVSA------IVCFVNICFHWLE-GPM---------MSQAGLEPSAQTYTKL 352
G GE +D + +V F + W G M M + G++P ++ L
Sbjct: 583 DGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSIL 642
Query: 353 MCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVG 409
GYA+ G+ + ++L Q V + Y II +G + ++ K+ VG
Sbjct: 643 AKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVG 702
Query: 410 YSADAANH 417
S + +
Sbjct: 703 LSPNLTTY 710
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 53/281 (18%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFL-AKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
V D+ +N L + Y T + D + ++ ++PN T +++ YC++
Sbjct: 491 VKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNG------YCEE 544
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G +E A + M++ + VFN+LI G NDM ++ +M + G++P T+
Sbjct: 545 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
+ LM ++ G DM E I T M +
Sbjct: 605 STLMNAWSSVG-----------------------------------DMKRCEEIYTDMLE 629
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
G++P ++ L GYA+ G+ + ++L Q V + +I+ +SG +
Sbjct: 630 GGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNV--VIYTQIISGWCSAGEM 687
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
A+ + +C GL P+ TY L+ G+ +
Sbjct: 688 KKAMQVYKKMC---------GIVGLSPNLTTYETLIWGFGE 719
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK 129
F EL V ++ +N+L++ +L+ + + +E G++P+ VT+ S
Sbjct: 553 FFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF------ST 606
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L++ + G+++ +I M + F+ L G+++A + AE IL M + G
Sbjct: 607 LMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFG 666
Query: 190 LEPSAQTYTKLMCGYAKHGDM 210
+ P+ YT+++ G+ G+M
Sbjct: 667 VRPNVVIYTQIISGWCSAGEM 687
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSF 232
A I + + G +PS TYT L+ + S+ K + LKP + LF
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILF----- 392
Query: 233 QLTNLLILVSSD---MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
N +I SS+ + A I M ++G +P+A T+ L+ GY K G ++ RLL
Sbjct: 393 ---NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 447
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 18/125 (14%)
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL---DIIH 304
A I + + G +PS TYT L+ + S+ L+++ + + D + II+
Sbjct: 338 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 397
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
A + SG+ +D+ I M ++G +P+A T+ L+ GY K G ++
Sbjct: 398 ASSESGN---LDQAMKIF------------EKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 365 IRRLL 369
RLL
Sbjct: 443 SSRLL 447
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 139/358 (38%), Gaps = 43/358 (12%)
Query: 45 LFVYLNSKWCSEP----SLGP--GNLPCEDPFSVHTG--ELDVPLDISHYNALLRVYLDN 96
L +Y K S P SL P +LP F++ L +PL + +N +LR
Sbjct: 70 LRLYAQLKSLSVPIPVASLHPLLSSLPSAPAFALFADIYRLRLPLCTTTFNIMLRHLC-- 127
Query: 97 EHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDK-TF 155
T P L +L Q PN VTY +I+ +C G ++ A +++ MR++
Sbjct: 128 -ATGKPVRAL-ELLRQMPRPNAVTYNTVIAG------FCARGRVQAALEVMREMRERGGI 179
Query: 156 PISEGVFNALIYGHSQANDMASAEGIL-TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
+ + LI G + M A + M+++ + PSA Y L+ GY G +D
Sbjct: 180 APDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVAL 239
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+ + ++ L + + + + A +L M + G P TY L+ GY
Sbjct: 240 QYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGY 299
Query: 275 AKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI---------V 322
K G+ + ++Q G Y +I+ + G + D + + V
Sbjct: 300 CKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDV 359
Query: 323 CFVN--ICFHWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
N I H G M M + + P TY LM G+ G +D R L+
Sbjct: 360 VMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLI 417
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 92/216 (42%), Gaps = 22/216 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ + ++ YN L+ + L +++ G P+ TY LI+ YC++G
Sbjct: 250 IAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILING------YCKEG 303
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N + A ++ E M K + + +LIY S+ + + + + + G+ P Y
Sbjct: 304 NEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYN 363
Query: 199 KLMCGYAKHGDMDSI--------KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
L+ + GDM+ K +IP P + ++ + +L D A
Sbjct: 364 ALINSHCTGGDMERAYEIMAEMEKKRIP---PDD---MTYNTLMRGFCLLGRLD--EART 415
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
++ M++ G++P +Y L+ GY+ GD+ R+
Sbjct: 416 LIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRV 451
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 79/164 (48%), Gaps = 10/164 (6%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+GI P+ V Y LI++ +C G++E A +I+ M K P + +N L+ G
Sbjct: 353 KGIRPDVVMYNALINS------HCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCL 406
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTKIPSL-KPQSELFLC 229
+ A ++ M++ G++P +Y L+ GY+ GD+ D+++ + + K + +
Sbjct: 407 LGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMT 466
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCG 273
++ + L + D AE ++ M G+ P TY L+ G
Sbjct: 467 YNALIQGLCKIRQGD--DAENLMKEMVAKGITPDDSTYISLIEG 508
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 119/576 (20%), Positives = 221/576 (38%), Gaps = 73/576 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQG--IEPNRVTYQQLISNSKLISKYCQDGNIEGA 143
Y ++ N +T + F+ K+ G ++ + VT L+ +C+ N+ A
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVT--------SLLLGFCRGLNLRDA 249
Query: 144 TKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
K+ + M R+ T + ++ LI+G + + A G+ M + G +PS +TYT L+
Sbjct: 250 LKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309
Query: 203 GYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
G +D + KP + L + A G+ M +
Sbjct: 310 ALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCR-----DGKIEEANGVCRKMVK 364
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
G+ PS TY L+ GY K G + LL ++ A + +E
Sbjct: 365 DGIFPSVITYNALINGYCKDGRVVPAFELLT-------------VMEKRACKPNVRTFNE 411
Query: 318 VSAIVCFVNICF---HWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGS 374
+ +C V + H L+ M GL P +Y L+ G + G M+ +LL S
Sbjct: 412 LMEGLCRVGKPYKAVHLLK--RMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNS 469
Query: 375 SLVNGDYLD---IIHALAVSGHGEYIDEIIS-KIQPGVGY-SADAANHIYHLINKGQIDA 429
+ D L II+A G + + ++ G+ I + N G+
Sbjct: 470 FDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRD 529
Query: 430 AYRIVNTLAR--------SANINGEQLPVGGFLVRHMV---KTNQPGVGYSADAANHIYH 478
A I+ TL + S N+ + L G L + K N+ G+ S +
Sbjct: 530 ALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVD 589
Query: 479 -LINKGQIDAAYRIVNTLARSA---NINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLT 534
LI G I ++R++ + S N+ + + G V + +K+L+ +
Sbjct: 590 GLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRV---EEAEKLLSA---MQ 643
Query: 535 DENLHPRAFNLAVLIKAHVLKEDYTGAVETFEYCV-------NQFRATPWKGELL-KRFI 586
D + P V++K +V A+ET V ++ ++ +G +L ++ I
Sbjct: 644 DSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGI 703
Query: 587 QAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDAE 622
+ D C++ + + + G + L +++ L E
Sbjct: 704 RETDPECIKELISVVEQLGGSTSGLCIFLVTRLCKE 739
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 44/282 (15%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI---------------- 125
DI YN L+ H L + S +EP+ +T+ +I
Sbjct: 440 DIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFL 499
Query: 126 -------------SNSKLISKYCQDGNIEGATKILEF---MRDKTFPISEGVFNALIYGH 169
+ + LI C G A ILE MR T P S N ++
Sbjct: 500 GLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHS---LNVILDML 556
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC 229
S+ + +L +++ GL PS TYT L+ G + GD+ + +K L
Sbjct: 557 SKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNV 616
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRL 286
+ + + + + AE +L+ M +G+ P+ TYT ++ GY +G +D R
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 287 LAQSGSSLVNGDYLDIIHALAVSGHG------EYIDEVSAIV 322
+ + G L + Y ++ +S G E I E+ ++V
Sbjct: 677 MVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVV 718
>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1245
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 128/302 (42%), Gaps = 42/302 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLA-KLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D++ +N L+ V L E +F + +L K+E G P VTY ++ YC+ G
Sbjct: 192 DVATFNILINV-LCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLH------WYCKKGRF 244
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A ++L+ M K +N LI+ ++N A +L M + + P+ TY L
Sbjct: 245 KAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTL 304
Query: 201 MCGYAKHGDMDSIKTKIP-----SLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGIL 252
+ G++ G + + + L P F N LI + + A +
Sbjct: 305 LNGFSNEGKVLIARQLLNEMLTFGLSPNHVTF--------NALIDGHISEGNFKEALKMF 356
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVS 309
MM GL + +Y L+ G K+ + D R + ++G + Y +I L +
Sbjct: 357 HMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G ++DE ++ MS+ G++P TY+ L+ G+ + G + + + ++
Sbjct: 417 G---FLDEAVVML------------NEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIV 461
Query: 370 AQ 371
+
Sbjct: 462 CR 463
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 124/336 (36%), Gaps = 68/336 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI Y+AL+ + + + + ++ G+ PN + Y LI N C+ G ++
Sbjct: 437 DIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNC------CRMGCLK 490
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+I E M + FN L+ +A +A AE + M+ G+ P+A ++ L+
Sbjct: 491 ETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLI 550
Query: 202 CGYAKHGD-------MDSIKTKI---PSLKPQSELF--LC------------FSFQ---- 233
GY G+ D + TK+ P+ L LC S Q
Sbjct: 551 NGYGSSGEGLKAFSVFDEM-TKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPA 609
Query: 234 -----LTNLLILV---SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
+ N LI S ++ A + M Q + P + TYT L+ G + G
Sbjct: 610 AVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGK------ 663
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICF---HWLEG----PMMS 338
+ I+ A G + CFV+ F W G M
Sbjct: 664 ------------TVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMD 711
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGS 374
+ GL T ++ GY++ G ++ LL + G+
Sbjct: 712 KLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGN 747
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 92/220 (41%), Gaps = 12/220 (5%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H V D+ YN L+ + + L + + I PN VTY L++
Sbjct: 253 HMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNG----- 307
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ +G + A ++L M + FNALI GH + A + MM GL
Sbjct: 308 -FSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIG 366
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS-FQLTNLL--ILVSSDMASAE 249
+ +Y L+ G K+ + D + +K +C T ++ + + + A
Sbjct: 367 TEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG---VCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+L MS+ G++P TY+ L+ G+ + G + + + ++ +
Sbjct: 424 VMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCR 463
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 116/298 (38%), Gaps = 29/298 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y LL N F +++ G+ R+TY + +I C++G ++ A
Sbjct: 371 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITY------TGMIDGLCKNGFLDEAVV 424
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M ++ALI G + + +A+ I+ + + GL P+ Y+ L+
Sbjct: 425 MLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCC 484
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G + ++ + F+F + + + +A AE + M+ G+ P+A
Sbjct: 485 RMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAV 544
Query: 266 TYTKLMCGYAKHGD---MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH----GEYIDE- 317
++ L+ GY G+ SV + + G Y ++ L GH +++
Sbjct: 545 SFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSL 604
Query: 318 ------VSAIVCFVNICFHWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHG 360
V ++C I G + M Q + P + TYT L+ G + G
Sbjct: 605 QNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKG 662
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 104/257 (40%), Gaps = 34/257 (13%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+E +R T+ LIS K C +G I A ++ M + + +A++ ++
Sbjct: 818 RGVEVDRHTFNMLIS------KCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNR 871
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC-- 229
+ + +L MS+ G+ P ++ Y L+ G + GD IKT + +C
Sbjct: 872 NHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGD---IKTAFVVKEEMIAHKICPP 928
Query: 230 ---FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SV 283
S + L +D AS +L M + L P+ ++T LM + K+G++ +
Sbjct: 929 NVAESAMVRALAKCGKADEASL--LLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALEL 986
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
R +++ G L Y +I L G + I F E M + G
Sbjct: 987 RVVMSNCGLKLDLVSYNVLITGLCAKGD-------------MAIAFELFEE--MKRDGFL 1031
Query: 344 PSAQTYTKLMCGYAKHG 360
+ TY L+ G G
Sbjct: 1032 ANVTTYKALVGGILSQG 1048
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 149/379 (39%), Gaps = 40/379 (10%)
Query: 76 ELDVPLDISHYNALLRVYLDN---EHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
EL ++ YN LL+ + D E +A + + PN V+Y +I+
Sbjct: 159 ELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVING----- 213
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ +G ++ A + M D+ P + + +I G +A + AEG+ M G+ P
Sbjct: 214 -FFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRP 272
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ TYT L+ GY G + + + CF++ L + A +
Sbjct: 273 NIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLF 332
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
M + G++P Y ++ GYA G +M S L+ +G S + + + A A
Sbjct: 333 DSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKK 392
Query: 310 GH-GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
GE +D + M Q GL P+ Y L+ K G +D
Sbjct: 393 AMIGEAMDIFNK----------------MRQQGLSPNVVNYATLIDALCKLGRVDDAELK 436
Query: 369 LAQNGSSLVNGD---YLDIIHALAV----SGHGEYIDEIISK-IQPGVGYSADAANHIYH 420
Q + V + + +++ L GE E++++ I P V + + +
Sbjct: 437 FNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTI---MCN 493
Query: 421 LINKGQIDAAYRIVNTLAR 439
L +G++ A R+++ + R
Sbjct: 494 LCTEGRVMKAQRLIDLMER 512
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 154/400 (38%), Gaps = 64/400 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I Y L+ YL L ++ + G+EP+ TY L+ C+ G
Sbjct: 273 NIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTY------GLLLDYLCKKGKCT 326
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ + M K ++ +++G++ ++ L +M G+ P+ + +
Sbjct: 327 EARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVF 386
Query: 202 CGYAKH---GDMDSIKTKI------PSLKPQSELF--LC-----------FSFQLT---- 235
C +AK G+ I K+ P++ + L LC F+ +
Sbjct: 387 CAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVA 446
Query: 236 -NLLILVS--------SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
N+++ S A + M G+ P+ + +MC G + +RL
Sbjct: 447 PNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRL 506
Query: 287 LAQSGSSLVNGDYLDIIHALA-VSGHG--EYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
+ G DII A + GH DE S ++ +M GL+
Sbjct: 507 IDLMERV---GTRPDIISYNALIRGHCLVGKTDEASKLL------------DIMLSVGLK 551
Query: 344 PSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEI 400
P+ TY L+ GY + G +D S+ + + NG + V Y I+H L + E+
Sbjct: 552 PNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKEL 611
Query: 401 -ISKIQPGVGYSADAANHIYHLINKGQ-IDAAYRIVNTLA 438
++ I G +S N I + ++K +D A ++ +L
Sbjct: 612 YLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLC 651
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 6/186 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YNAL+R + T + L + S G++PN TY L+ YC+DG I+
Sbjct: 518 DIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHG------YCRDGRID 571
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M +N +++G + + A+ + M +G + S TY ++
Sbjct: 572 DAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIIL 631
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G +K+ +D SL + +F + +L A + +S GL
Sbjct: 632 NGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLV 691
Query: 262 PSAQTY 267
P TY
Sbjct: 692 PDVTTY 697
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 130/303 (42%), Gaps = 35/303 (11%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNXMQASGVQPDVY-TYSVLINGL--CKESKMDDANELFDEMLDNGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNIC 328
G+ K+G +D + Q S ++ D Y +I+ L G + +++
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLT--------- 299
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDII 385
MS GL+P TYT L+ G K G +++ R+ + + L + Y +I
Sbjct: 300 ------DEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALI 353
Query: 386 HALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARS 440
L G + + E++S ++P +G N KG + +++ + R
Sbjct: 354 SGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLLKEMQRD 410
Query: 441 ANI 443
+
Sbjct: 411 GYV 413
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ + MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K G +++ + + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +LL +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 119/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ + M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K G +++ R+ + + L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 105/270 (38%), Gaps = 44/270 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN LL L ++E +G+ P+ T+ + LI YC+ GN E
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTF------TTLIHGYCRQGNFE 419
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAE---------------------- 179
A ++ + + + +N+LI G + D+A A
Sbjct: 420 NALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILI 479
Query: 180 -------------GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL 226
G L M + G P+ +TY ++ GY + G++ + + ++ +
Sbjct: 480 DSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVF 539
Query: 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+F + +M A + +M + + P A TY ++ G+++ G+M R+
Sbjct: 540 PDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRV 599
Query: 287 LAQSGSSLVNGD---YLDIIHALAVSGHGE 313
G S + D Y+ +I+ +G+ +
Sbjct: 600 FKGMGDSGIEPDRYTYMSLINGHVTAGNSK 629
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 25/298 (8%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G P+ VTY L++ C+ + A K+L M ++ F LI+G+ +
Sbjct: 362 GCLPDVVTYNTLLNG------LCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQ 415
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+ +A + + + L P TY L+ G + GD+ + + L ++
Sbjct: 416 GNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITY 475
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
+ + A G L M + G P+ +TY ++ GY + G++ ++ L +
Sbjct: 476 SILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQ 535
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
V D + + HG YI E + F N+ F+ +E M + P A TY +
Sbjct: 536 DNVFPDLITFNTLI----HG-YIKEENMHGAF-NV-FNIMEKEM-----VRPDAVTYNMI 583
Query: 353 MCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYI----DEIISK 403
+ G+++ G+M R+ G S + D Y+ +I+ +G+ + DE+I +
Sbjct: 584 INGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHR 641
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/349 (19%), Positives = 130/349 (37%), Gaps = 42/349 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++ YC+ +GA ++ M + N LI +A D+ +A ++ M+ G
Sbjct: 163 MVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRG 222
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
L+P TY ++ G KH D K ++ S SF + ++ A
Sbjct: 223 LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAV 282
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNGDYLDIIHALAV 308
M + P +++ L+ +++ G+MD L + G LV +I+ + +
Sbjct: 283 KFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPD---GVIYTMVI 339
Query: 309 SGHG---------EYIDEVSAIVCFVNICFH--WLEGPM--------------MSQAGLE 343
G DE+ C ++ + L G M + G+
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVT 399
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEI 400
P T+T L+ GY + G+ ++ +L + D Y +I + G +E+
Sbjct: 400 PDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANEL 459
Query: 401 ISKIQPGVGYSADAANHIYHLI------NKGQIDAAYRIVNTLARSANI 443
+ NHI + I KGQ++ A+ ++ + + N+
Sbjct: 460 WDDMHA----REILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNL 504
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
GN+ F + +V D+ +N L+ Y+ E+ + +E + + P+ VTY
Sbjct: 521 GNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTY 580
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
+I+ + + GN++ A ++ + M D + +LI GH A + A +
Sbjct: 581 NMIING------FSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQL 634
Query: 182 LTMMSQAGLEP 192
M G P
Sbjct: 635 HDEMIHRGFAP 645
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 94/486 (19%), Positives = 178/486 (36%), Gaps = 63/486 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI Y Q A + + D P+ NAL+ S+A A+ ++ +
Sbjct: 93 LIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSD 152
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NLLI---LVSSDM 245
E +A T ++ Y K + D T I ++ + F +T N+LI + D+
Sbjct: 153 SEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRC----VFPDVVTHNVLIDARFRAGDV 208
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL-----------AQSGSSL 294
+A ++ M+ GL+P TY ++ G KH D + + +S + L
Sbjct: 209 DAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNIL 268
Query: 295 VN-----GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM---------MSQA 340
+ G+ + + H +V + C + + G M M
Sbjct: 269 IGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGL--FSRRGEMDHAGAYLREMKGL 326
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYI 397
GL P YT ++ G+ + G M +R + G Y +++ L
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDA 386
Query: 398 DEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSA----NINGEQLPV 450
++++++++ G + D I+ +G + A ++ +TL R + L
Sbjct: 387 EKLLNEMEER-GVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLID 445
Query: 451 GGFLVRHMVKTNQPGVGYSADA--ANHIYHLI------NKGQIDAAYRIVNTLARSA--- 499
G + K N+ A NHI + I KGQ++ A+ ++ + +
Sbjct: 446 GMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLP 505
Query: 500 NINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYT 559
NI + G+ VK Q ++ +N+ P LI ++ +E+
Sbjct: 506 NIRTYNSIIKGYCRSGNVKKGQQF------LQKMRQDNVFPDLITFNTLIHGYIKEENMH 559
Query: 560 GAVETF 565
GA F
Sbjct: 560 GAFNVF 565
>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
Length = 662
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 113/291 (38%), Gaps = 53/291 (18%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ LD YN ++R + + +G +P+ T+ + L+ YC G
Sbjct: 270 IELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTF------NTLLHAYCNLG 323
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E +L+ M+ + + +I GH +A D+ A+ LT + GL+P+ Y
Sbjct: 324 KMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYN 383
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ GY ++GD+ + ++K
Sbjct: 384 ALIGGYGRNGDISGAIDAVETMKSN----------------------------------- 408
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
G++P+ TY LM G ++ + + +Q+ + N D I + + + G+ + V
Sbjct: 409 GIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQAREN--NVDLGVIGYTIMIQGYCKLGKMV 466
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
A+ F M G+ P+ TYT LM Y+K G+ + +L
Sbjct: 467 EAVAYFEE----------MRSRGISPNKLTYTTLMYAYSKSGNSEEASKLF 507
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 75/188 (39%), Gaps = 16/188 (8%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+V L+ Y A+++ + + LA+L G++P VTY + L+ C+
Sbjct: 6 NVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTY------NVLMDALCKS 59
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G +E A ++ M S F LI G ++ +L M Q G+ P+ Y
Sbjct: 60 GRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIY 119
Query: 198 TKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+L+ + + G + + +KP + ++ L + +M AE IL
Sbjct: 120 NELIGWHCRKGHCSQALRLFDEMVLKKMKPTA-----VTYNLIAKALCKEGEMERAERIL 174
Query: 253 TMMSQAGL 260
M G+
Sbjct: 175 EDMLSIGM 182
Score = 40.0 bits (92), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 68/348 (19%), Positives = 129/348 (37%), Gaps = 42/348 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + ++E G+ P+ VT+ LI+ ++ + G
Sbjct: 49 YNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVG------I 102
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M +E ++N LI H + + A + M ++P+A TY +
Sbjct: 103 VLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALC 162
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
K G+M+ + + + C F + L+ + + S I M G+ P+
Sbjct: 163 KEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPND 222
Query: 265 QTYTKLM---CGYAKHGDMDSVRRLLAQSGSSLVNGDYL----DIIHALAVSGHGEYIDE 317
T M C KH + + +L G Y+ +I + G +D
Sbjct: 223 PLMTACMRELCKGGKHQEAVGIWF------KTLNKGKYMKEATKVIQTML--NKGIELDS 274
Query: 318 VSAIVCFVNICFH-------WLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
++ + C L G M++ G +P T+ L+ Y G M+ LL
Sbjct: 275 ITYNIMIRGCCKDSKMEEAIKLHGD-MTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLD 333
Query: 371 QNGSSLVNGDYLDIIHALAVSGH---------GEYIDEIISK-IQPGV 408
Q + + D + + + GH EY+ E++ + ++P V
Sbjct: 334 QMKTEGLQPDIVS--YGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNV 379
>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 450
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 155/385 (40%), Gaps = 41/385 (10%)
Query: 76 ELDVPLDISHYNALL-RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
E + D+ Y+A++ R+ D H+ + F LE +GI PN TY +I +
Sbjct: 73 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDG------F 125
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C G A ++L M ++ FNALI + + AE + M + P
Sbjct: 126 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 185
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY ++ G+ KH D K + + +F + + + +L
Sbjct: 186 VTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRVDEGMQLLRE 241
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
+S+ GL + TY L+ G+ + ++++ + L + S V D + L E
Sbjct: 242 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 301
Query: 315 IDEVSAIVCFV------------NICFHWL-EGPMMSQA----------GLEPSAQTYTK 351
++E + + NI H + +G + +A G+EP QTY
Sbjct: 302 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 361
Query: 352 LM---CGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGV 408
++ CG + D + + + NG N Y +I +G + E+IS+++
Sbjct: 362 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN- 420
Query: 409 GYSADA--ANHIYHLINKGQIDAAY 431
G+S DA + LI G++D ++
Sbjct: 421 GFSGDAFTIKMVADLITDGRLDKSF 445
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 42/212 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L++ + L +++ +G PN VTY LI YC++GN+E
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDG------YCKEGNME 420
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ M +K + F+ LI G+ +A M +A G+ T M GL P YT L+
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K G+ +F+L M +AGL
Sbjct: 481 DGHFKDGNTKE------------------AFRLHK-----------------EMQEAGLH 505
Query: 262 PSAQTYTKLMCGYAKHGDM-DSVRRLLAQSGS 292
P+ T + L+ G K G + D+++ LA++G+
Sbjct: 506 PNVFTLSCLIDGLCKDGRISDAIKLFLAKTGT 537
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 127/321 (39%), Gaps = 81/321 (25%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY----------QQLISNSK------ 129
YN ++ Y H + ++ G+ PN VT+ +++S K
Sbjct: 266 YNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMA 325
Query: 130 -------------LISKYCQDGNIEGATKI-LEFMRDKTFPISEGVFNALIYGHSQANDM 175
LI YC+ GN+ A + E + + P ++ LI G + M
Sbjct: 326 SFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILP-DVFTYSILIKGLCGVDRM 384
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT 235
A+G+L M + G P+A TY L+ GY K G+M+
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME------------------------ 420
Query: 236 NLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV 295
A + + M++ G+EP+ T++ L+ GY K G M++ L + ++
Sbjct: 421 -----------KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE---MVI 466
Query: 296 NGDYLDIIHALA-VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMC 354
G D++ A + GH + + A H M +AGL P+ T + L+
Sbjct: 467 KGLLPDVVAYTALIDGHFKDGNTKEAFR------LH----KEMQEAGLHPNVFTLSCLID 516
Query: 355 GYAKHGDM-DSIRRLLAQNGS 374
G K G + D+I+ LA+ G+
Sbjct: 517 GLCKDGRISDAIKLFLAKTGT 537
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 135/335 (40%), Gaps = 37/335 (11%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL-EFMRDKTFPISEGVFNALIYGH 169
++G PN VTY LI C+ G+ A ++ E + K FP + ++ LI G
Sbjct: 186 ARGASPNVVTYGTLIDGC------CRQGDFLKAFRLFDEMIEKKIFP-TVVIYTILIRGL 238
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC 229
+ ++ AE + M +G+ P+ TY +M GY K + + L
Sbjct: 239 CGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNV 298
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+F + + + +M SA L M+ G+ P+ Y L+ GY K G++ L ++
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE 358
Query: 290 SGSSLVNGDYLDIIHALAVSGHG--EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
+ D +++ + G + ++E ++ M + G P+A
Sbjct: 359 IEKHEILPDVF--TYSILIKGLCGVDRMEEADGLL------------QEMKKKGFLPNAV 404
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGH-----GEYIDE 399
TY L+ GY K G+M+ + +Q + + + +I +G G Y +
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464
Query: 400 IISKIQPG-VGYSADAANHIYHLINKGQIDAAYRI 433
+I + P V Y+A H G A+R+
Sbjct: 465 VIKGLLPDVVAYTALIDGH----FKDGNTKEAFRL 495
>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
Length = 597
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 115/290 (39%), Gaps = 22/290 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y ++ VY S +++S G +PN TY + L++ + ++G E A +
Sbjct: 280 YTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTY------TALVNAFAREGLCEKAEE 333
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M+ +NAL+ +S+A A I ++M G EP +Y L+ +
Sbjct: 334 VFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFG 393
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G + LK Q S L S ++A E ++ + ++GL P
Sbjct: 394 RAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTF 453
Query: 266 TYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAVSGHGE--YIDEVSAI 321
++ Y + G +D + RL A + G + G + + V+ +G Y+D + A
Sbjct: 454 ALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAA 513
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
++ GL T+T + YA+ + R+ +
Sbjct: 514 F------------RSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEE 551
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 138/348 (39%), Gaps = 41/348 (11%)
Query: 82 DISHYNALLRVYLDNEH-TFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
DI YN L+ Y + + ++A LE++ + P TY + L+ YC G +
Sbjct: 171 DIICYNLLIDAYGQKRQLSEAEAAYMALLEARCV-PTEDTY------ALLLRAYCGSGQL 223
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A ++ M+ P + V+NA + G +A A + M + + +TYT +
Sbjct: 224 HRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLM 283
Query: 201 MCGYAKHGD-MDSIKT----KIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
+ Y K M S++ K KP +C L N AE + M
Sbjct: 284 INVYGKANQPMSSLRVFREMKSVGCKPN----ICTYTALVNAFAR-EGLCEKAEEVFEEM 338
Query: 256 SQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG-H 311
QAG EP Y LM Y++ G + L+ G Y ++ A +G H
Sbjct: 339 QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLH 398
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
E F L+ Q G+ P+ +++ L+ +A+ G++ ++AQ
Sbjct: 399 QE-----------AEAAFQELK-----QQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQ 442
Query: 372 NGSSLVNGDYLDI---IHALAVSGHGEYIDEIISKIQPGVGYSADAAN 416
S + D + ++A +G + ++ + + ++ G G A A +
Sbjct: 443 LHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPD 490
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 138/357 (38%), Gaps = 58/357 (16%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQ------------- 122
E + D+ YNAL+ ++ F + ++ +GI PN +TY
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377
Query: 123 ----------------QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
LI+ + LI YC I+ ++L M + +N LI
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTKIPSLKPQSE 225
+G D+ +A +L M +GL P T L+ G +G + D+++ K + +
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497
Query: 226 LFLCFSF-------QLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
L F Q N+LI + AE + M G+ P TY+ ++ G
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557
Query: 276 KHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWL 332
K +D ++ GS + + + +I+ +G +D+ + C
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR---VDDGLELFC--------- 605
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALA 389
M + G+ +A TY L+CG+ K G+++ + + SS V D + I + L
Sbjct: 606 ---EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 137/344 (39%), Gaps = 58/344 (16%)
Query: 79 VPLDISHYNALLRVYLD-NEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+ DI + L++ + ++ F+ + F KL G+ P+ VT+ L+ C +
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTF-GKLTKLGLHPDVVTFNTLLHG------LCVE 162
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+ A + M + T + F L+ G + + A +L M + GL+P+ TY
Sbjct: 163 DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELF---LCFSFQLTNLLILVSSDMASAEGILTM 254
++ G K GD S + ++ S + + +S + +L + A+ + T
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL--CKDGRHSDAQNLFTE 280
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
M + G+ P TY ++ G+ G +LL + ++ D Y +I+A G
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 312 ----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
E DE M G+ P+ TY+ ++ G+ K +D+
Sbjct: 341 FFEAEELYDE-------------------MLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 368 ---LLAQNGSS--------LVNG--------DYLDIIHALAVSG 392
L+A G S L++G D ++++H + +G
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 114/287 (39%), Gaps = 31/287 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+A++ + + +++ +GI P+ TY +I +C G A +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG------FCSSGRWSDAEQ 311
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M ++ +NALI + AE + M G+ P+ TY+ ++ G+
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371
Query: 206 KHGDMDSIKTK--IPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGL 260
K +D+ + + + K S + F N LI + + +L M++ GL
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITF-----NTLIDGYCGAKRIDDGMELLHEMTETGL 426
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVS 319
TY L+ G+ GD+++ LL + SS + D + L + +G+ D +
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 320 AIVCFVNICFHWLEGPMMSQ------AGLEPSAQTYTKLMCGYAKHG 360
F ++ G+EP QTY L+ G G
Sbjct: 487 M--------FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEG 525
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y A++ Y + L++++ QG+ PN TY + LI +C+ GN E
Sbjct: 345 NVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTY------TTLIDGHCKAGNFE 398
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ M + F + +NA++ G + + A +L Q GL+P TY LM
Sbjct: 399 RAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILM 458
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQA 258
++H ++I+ + ++ + LI V + M +E +
Sbjct: 459 ---SEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRI 515
Query: 259 GLEPSAQTYTKLMCGYAKHGDM 280
G+ P+ +TYT ++CGY + G++
Sbjct: 516 GIIPTNKTYTSMICGYCREGNL 537
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 106/262 (40%), Gaps = 61/262 (23%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL + S+ +PN +TY + +IS YC++ + A +L M+++ + +
Sbjct: 333 FLKLVRSENHKPNVLTY------TAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTT 386
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
LI GH +A + A ++ +MS G P+ TY ++ G K G +
Sbjct: 387 LIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQ------------- 433
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
A +L Q GL+P TY LM ++H +++R
Sbjct: 434 ----------------------EAYKMLEDGFQNGLKPDKFTYNILM---SEHCKQENIR 468
Query: 285 RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA---- 340
+ LA L G D IH+ + A+ C N E M +
Sbjct: 469 QALALFNKMLKIGIQPD-IHSYTT---------LIAVFCREN---RMKESEMFFEEAVRI 515
Query: 341 GLEPSAQTYTKLMCGYAKHGDM 362
G+ P+ +TYT ++CGY + G++
Sbjct: 516 GIIPTNKTYTSMICGYCREGNL 537
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 120/300 (40%), Gaps = 67/300 (22%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G++P+ ++Y+ ++ YC+ GNI A K L M ++ F + F +I S
Sbjct: 199 RGVQPDSISYRVMVV------MYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSG 252
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---------KTKIPSLKP 222
A + GLEP+ +T ++ G K G + K P++
Sbjct: 253 KGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYT 312
Query: 223 QSELF--LC------FSFQLTNLLILVSSD---------------------MASAEGILT 253
+ L LC +F+L L LV S+ + AE +L+
Sbjct: 313 HTSLIDGLCKKGWTEKAFRL--FLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLS 370
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSG 310
M + GL P+ TYT L+ G+ K G+ + + L++ G S Y I++ L G
Sbjct: 371 RMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRG 430
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
V + LE Q GL+P TY LM ++H ++IR+ LA
Sbjct: 431 R-------------VQEAYKMLEDGF--QNGLKPDKFTYNILM---SEHCKQENIRQALA 472
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 46/125 (36%), Gaps = 6/125 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI Y L+ V+ F + GI P TY + +I YC++GN+
Sbjct: 485 DIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTY------TSMICGYCREGNLT 538
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K + D + A+I G + + A + M + GL P T L
Sbjct: 539 LAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLA 598
Query: 202 CGYAK 206
Y K
Sbjct: 599 YEYCK 603
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 134/330 (40%), Gaps = 35/330 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+ ++ H + ++E++G+ PN +TY S LIS C A++
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY------SSLISCLCNYERWSDASR 316
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M ++ + FNALI + + AE + M + ++P TY+ L+ G+
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NLLI---LVSSDMASAEGILTMMSQAGLE 261
H +D K + + CF +T N LI + + + MSQ GL
Sbjct: 377 MHDRLDEAKHMFELMISKD----CFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
+ TYT L+ G+ + D D+ + + Q S V+ + Y ++ L +G E
Sbjct: 433 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLE----- 487
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
A+V F + ++ +EP+ TY ++ G K G ++ L V
Sbjct: 488 KAMVVF----------EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 379 GD---YLDIIHALAVSGHGEYIDEIISKIQ 405
D Y +I G E D + K++
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 130/310 (41%), Gaps = 38/310 (12%)
Query: 72 VHTGELDVPLDISH----YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
+ GE L ISH YN L+ + L K+ G EP+ VT
Sbjct: 105 ISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL------ 158
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S L++ YC I A +++ M + + F LI+G N + A ++ M Q
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
G +P+ TY ++ G K GD+D ++ K+ + K ++ + + +S + +L D
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI-YSTVIDSLCKYRHED 277
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD 301
A + T M G+ P+ TY+ L +C Y + D RLL+ +N + +
Sbjct: 278 --DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSD---ASRLLSDMIERKINPNVV- 331
Query: 302 IIHAL--AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
+AL A G+ ++ L M+ ++ ++P TY+ L+ G+ H
Sbjct: 332 TFNALIDAFVKEGKLVEA------------EKLYDEMIKRS-IDPDIFTYSSLINGFCMH 378
Query: 360 GDMDSIRRLL 369
+D + +
Sbjct: 379 DRLDEAKHMF 388
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 89/213 (41%), Gaps = 9/213 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI Y++L+ + ++ + S+ PN VTY LI+ +C+ I+
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING------FCKAKRID 417
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
++ M + + + LI+G QA D +A+ + M G+ P+ TY L+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K+G ++ L+ +++ + + + + + +S G++
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
Query: 262 PSAQTYTKLMCGYAKHG---DMDSVRRLLAQSG 291
P Y ++ G+ + G + D++ R + + G
Sbjct: 538 PDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 138/357 (38%), Gaps = 58/357 (16%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQ------------- 122
E + D+ YNAL+ ++ F + ++ +GI PN +TY
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377
Query: 123 ----------------QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
LI+ + LI YC I+ ++L M + +N LI
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTKIPSLKPQSE 225
+G D+ +A +L M +GL P T L+ G +G + D+++ K + +
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497
Query: 226 LFLCFSF-------QLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
L F Q N+LI + AE + M G+ P TY+ ++ G
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557
Query: 276 KHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWL 332
K +D ++ GS + + + +I+ +G +D+ + C
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR---VDDGLELFC--------- 605
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALA 389
M + G+ +A TY L+CG+ K G+++ + + SS V D + I + L
Sbjct: 606 ---EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/344 (20%), Positives = 137/344 (39%), Gaps = 58/344 (16%)
Query: 79 VPLDISHYNALLRVYLD-NEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+ DI + L++ + ++ F+ + F K+ G+ P+ VT+ L+ C +
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTF-GKITKLGLHPDVVTFNTLLHG------LCVE 162
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+ A + M + T + F L+ G + + A +L M + GL+P+ TY
Sbjct: 163 DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELF---LCFSFQLTNLLILVSSDMASAEGILTM 254
++ G K GD S + ++ S + + +S + +L + A+ + T
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL--CKDGRHSDAQNLFTE 280
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
M + G+ P TY ++ G+ G +LL + ++ D Y +I+A G
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 312 ----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
E DE M G+ P+ TY+ ++ G+ K +D+
Sbjct: 341 FFEAEELYDE-------------------MLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 368 ---LLAQNGSS--------LVNG--------DYLDIIHALAVSG 392
L+A G S L++G D ++++H + +G
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 114/287 (39%), Gaps = 31/287 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+A++ + + +++ +GI P+ TY +I +C G A +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG------FCSSGRWSDAEQ 311
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M ++ +NALI + AE + M G+ P+ TY+ ++ G+
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371
Query: 206 KHGDMDSIKTK--IPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGL 260
K +D+ + + + K S + F N LI + + +L M++ GL
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITF-----NTLIDGYCGAKRIDDGMELLHEMTETGL 426
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVS 319
TY L+ G+ GD+++ LL + SS + D + L + +G+ D +
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 320 AIVCFVNICFHWLEGPMMSQ------AGLEPSAQTYTKLMCGYAKHG 360
F ++ G+EP QTY L+ G G
Sbjct: 487 M--------FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEG 525
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 138/357 (38%), Gaps = 58/357 (16%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQ------------- 122
E + D+ YNAL+ ++ F + ++ +GI PN +TY
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377
Query: 123 ----------------QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
LI+ + LI YC I+ ++L M + +N LI
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTKIPSLKPQSE 225
+G D+ +A +L M +GL P T L+ G +G + D+++ K + +
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497
Query: 226 LFLCFSF-------QLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
L F Q N+LI + AE + M G+ P TY+ ++ G
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557
Query: 276 KHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWL 332
K +D ++ GS + + + +I+ +G +D+ + C
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR---VDDGLELFC--------- 605
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALA 389
M + G+ +A TY L+CG+ K G+++ + + SS V D + I + L
Sbjct: 606 ---EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 139/344 (40%), Gaps = 58/344 (16%)
Query: 79 VPLDISHYNALLRVYLD-NEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+ DI +N L++ + ++ F+ + F K+ G+ P+ VT+ + L+ C +
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTF-GKITKLGLHPDVVTF------TTLLHGLCVE 162
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+ A + M + T + F L+ G + + A +L M + GL+P+ TY
Sbjct: 163 DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELF---LCFSFQLTNLLILVSSDMASAEGILTM 254
++ G K GD S + ++ S + + +S + +L + A+ + T
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL--CKDGRHSDAQNLFTE 280
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
M + G+ P TY ++ G+ G +LL + ++ D Y +I+A G
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 312 ----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
E DE M G+ P+ TY+ ++ G+ K +D+
Sbjct: 341 FFEAEELYDE-------------------MLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 368 ---LLAQNGSS--------LVNG--------DYLDIIHALAVSG 392
L+A G S L++G D ++++H + +G
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 114/287 (39%), Gaps = 31/287 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+A++ + + +++ +GI P+ TY +I +C G A +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG------FCSSGRWSDAEQ 311
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M ++ +NALI + AE + M G+ P+ TY+ ++ G+
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371
Query: 206 KHGDMDSIKTK--IPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGL 260
K +D+ + + + K S + F N LI + + +L M++ GL
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITF-----NTLIDGYCGAKRIDDGMELLHEMTETGL 426
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVS 319
TY L+ G+ GD+++ LL + SS + D + L + +G+ D +
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 320 AIVCFVNICFHWLEGPMMSQ------AGLEPSAQTYTKLMCGYAKHG 360
F ++ G+EP QTY L+ G G
Sbjct: 487 M--------FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEG 525
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 162/419 (38%), Gaps = 49/419 (11%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQG--IEPNRVTYQQLISNSKL 130
T EL D+ Y+ LL+ D + D L + G PN V Y +I
Sbjct: 175 RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG--- 231
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
+ ++G++ A + + M + P +N++++ +A M AE L M +
Sbjct: 232 ---FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 288
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
P+ TY L+ GY+ G ++ S L + + + + A
Sbjct: 289 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 348
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
+ M+ G P +Y ++ GYA G DM + L+ G + + +I A A
Sbjct: 349 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 408
Query: 308 VSG--------------HGEYIDEVSAIVCFVNIC-FHWLEGPM-----MSQAGLEPSAQ 347
G HG D V+ +C ++ M M G+ P
Sbjct: 409 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 468
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH----GEYID-EIIS 402
Y L+ G+ HG + + L+++ + NG +LDI+ ++ + G +D + I
Sbjct: 469 AYNCLIQGFCTHGSLLKAKELISE---IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 525
Query: 403 KIQPGVGYSADAANHIYHLINK-----GQIDAAYRIVNTLARSA---NINGEQLPVGGF 453
+ VG DA +Y+++ G+++ A R+ + + + N+ G V G+
Sbjct: 526 DLTVNVGLHPDAV--VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 582
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L++ + + + ++++ + G+ + V + +I+N C+ G +
Sbjct: 466 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN------LCKLGRVM 519
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A I + + V+N L+ G+ M A + M AG+EP+ Y L+
Sbjct: 520 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 579
Query: 202 CGYAKHGDMD 211
GY K G +D
Sbjct: 580 NGYCKIGRID 589
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 138/357 (38%), Gaps = 58/357 (16%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQ------------- 122
E + D+ YNAL+ ++ F + ++ +GI PN +TY
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377
Query: 123 ----------------QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
LI+ + LI YC I+ ++L M + +N LI
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTKIPSLKPQSE 225
+G D+ +A +L M +GL P T L+ G +G + D+++ K + +
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497
Query: 226 LFLCFSF-------QLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
L F Q N+LI + AE + M G+ P TY+ ++ G
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557
Query: 276 KHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWL 332
K +D ++ GS + + + +I+ +G +D+ + C
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR---VDDGLELFC--------- 605
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALA 389
M + G+ +A TY L+CG+ K G+++ + + SS V D + I + L
Sbjct: 606 ---EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 136/353 (38%), Gaps = 76/353 (21%)
Query: 79 VPLDISHYNALLRVYLD-NEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+ DI + L++ + ++ F+ + F K+ G+ P+ VT+ L+ C +
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTF-GKITKLGLHPDVVTFNTLLHG------LCVE 162
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+ A + M + T + F L+ G + + A +L M + GL+P+ TY
Sbjct: 163 DRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222
Query: 198 TKLMCGYAKHGD----------MDSIKTKIPSLKPQSELF--LCFSFQLTNLLILVSSDM 245
++ G K GD M+ I IP++ S + LC
Sbjct: 223 GTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLC-----------KDGRH 271
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDI 302
+ A+ + T M + G+ P TY ++ G+ G +LL + ++ D Y +
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNAL 331
Query: 303 IHALAVSGH----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
I+A G E DE M G+ P+ TY+ ++ G+ K
Sbjct: 332 INAFVKEGKFFEAEELYDE-------------------MLPRGIIPNTITYSSMIDGFCK 372
Query: 359 HGDMDSIRR---LLAQNGSS--------LVNG--------DYLDIIHALAVSG 392
+D+ L+A G S L++G D ++++H + +G
Sbjct: 373 QNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 114/287 (39%), Gaps = 31/287 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+A++ + + +++ +GI P+ TY +I +C G A +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG------FCSSGRWSDAEQ 311
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M ++ +NALI + AE + M G+ P+ TY+ ++ G+
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371
Query: 206 KHGDMDSIKTK--IPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGL 260
K +D+ + + + K S + F N LI + + +L M++ GL
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITF-----NTLIDGYCGAKRIDDGMELLHEMTETGL 426
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVS 319
TY L+ G+ GD+++ LL + SS + D + L + +G+ D +
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 320 AIVCFVNICFHWLEGPMMSQ------AGLEPSAQTYTKLMCGYAKHG 360
F ++ G+EP QTY L+ G G
Sbjct: 487 M--------FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEG 525
>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
Length = 854
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 152/368 (41%), Gaps = 50/368 (13%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ +H S ++K+E G++P+ + + +I+ S + GN++ A K
Sbjct: 380 YTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS------ESGNLDQAMK 433
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM-SQAGLEPSAQTYTKLM--- 201
I E M++ + FN LI G+ + + + +L MM L+P+ +T L+
Sbjct: 434 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 493
Query: 202 CGYAKHGDMDSIKTKIPS--LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
C K + +I K+ S +KP F L + S + + I+ M
Sbjct: 494 CNQRKIEEAWNIVYKMQSYGVKPDVVTF----NTLAKAYARIGSTCTAEDMIIPRMLHNK 549
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG-----------SSLVNGDYLDIIHALAV 308
++P+ +T ++ GY + G M+ R + +SL+ G +L+I +
Sbjct: 550 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKG-FLNIND---M 605
Query: 309 SGHGEYIDEVSA------IVCFVNICFHWLE-GPM---------MSQAGLEPSAQTYTKL 352
G GE +D + +V F + W G M M + G++P ++ L
Sbjct: 606 DGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSIL 665
Query: 353 MCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVG 409
GYA+ G+ + ++L Q V + Y II +G + ++ K+ VG
Sbjct: 666 AKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVG 725
Query: 410 YSADAANH 417
S + +
Sbjct: 726 LSPNLTTY 733
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 112/281 (39%), Gaps = 53/281 (18%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFL-AKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
V D+ +N L + Y T + D + ++ ++PN T +++ YC++
Sbjct: 514 VKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNG------YCEE 567
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G +E A + M++ + VFN+LI G NDM ++ +M + G++P T+
Sbjct: 568 GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 627
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
+ LM ++ G DM E I T M +
Sbjct: 628 STLMNAWSSVG-----------------------------------DMKRCEEIYTDMLE 652
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
G++P ++ L GYA+ G+ + ++L Q V + +I+ +SG +
Sbjct: 653 GGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNV--VIYTQIISGWCSAGEM 710
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
A+ + +C GL P+ TY L+ G+ +
Sbjct: 711 KKAMQVYKKMC---------GIVGLSPNLTTYETLIWGFGE 742
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK 129
F EL V ++ +N+L++ +L+ + + +E G++P+ VT+ S
Sbjct: 576 FFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF------ST 629
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L++ + G+++ +I M + F+ L G+++A + AE IL M + G
Sbjct: 630 LMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFG 689
Query: 190 LEPSAQTYTKLMCGYAKHGDM 210
+ P+ YT+++ G+ G+M
Sbjct: 690 VRPNVVIYTQIISGWCSAGEM 710
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSF 232
A I + + G +PS TYT L+ + S+ K + LKP + LF
Sbjct: 361 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILF----- 415
Query: 233 QLTNLLILVSSD---MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
N +I SS+ + A I M ++G +P+A T+ L+ GY K G ++ RLL
Sbjct: 416 ---NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 470
Score = 39.7 bits (91), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 18/125 (14%)
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL---DIIH 304
A I + + G +PS TYT L+ + S+ L+++ + + D + II+
Sbjct: 361 AHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIIN 420
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
A + SG+ +D+ I M ++G +P+A T+ L+ GY K G ++
Sbjct: 421 ASSESGN---LDQAMKIF------------EKMKESGCKPTASTFNTLIKGYGKIGKLEE 465
Query: 365 IRRLL 369
RLL
Sbjct: 466 SSRLL 470
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 162/396 (40%), Gaps = 50/396 (12%)
Query: 83 ISHYNALLRVYLDNEHTFSPT-DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
I YN +L VY + + +A ++ G+ P+R TY LIS + + Y +
Sbjct: 207 IVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKE----- 261
Query: 142 GATKILEFMRDKTFPISEGVFNAL--IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
A ++ + M+ F + FN+L +YG ++ +D A ++ M + G PS TY
Sbjct: 262 -AAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHD--EAIEVIQEMERVGCPPSVVTYNS 318
Query: 200 LMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
L+ Y K G ++ + ++ +KP + ++ ++ L D A E
Sbjct: 319 LISSYVKDGLLEQAVALKQEMEVKGMKPD---VVTYTTLISGLDRAGKIDAAIVE--YDE 373
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
M + G +P+ TY L+ + G + + + S+ D + LAV G
Sbjct: 374 MVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGL 433
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQ 371
EVS + M +AG P TY L+ Y++ G D I + + +
Sbjct: 434 DSEVSGVF------------KEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMME 481
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ-----PGVGYSADAANHIYHLINKGQ 426
G Y ++ ALA G E +++ ++++ P YS + H Y
Sbjct: 482 AGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD-EYSYSSLLHAYA------ 534
Query: 427 IDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTN 462
A R+ A S +I E++ +LV+ +V N
Sbjct: 535 --NAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVN 568
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 133/339 (39%), Gaps = 64/339 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI +N LL V+ N + +++ G P R TY LIS+ Y + G +
Sbjct: 417 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISS------YSRCGLFD 470
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M + +NA++ ++ AE + M + +P +Y+ L+
Sbjct: 471 LAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 530
Query: 202 CGYAKHGDMDSIK-------------------------TKIPSLKPQSELFLCFSFQLTN 236
YA +D +K +K+ +L + FL + +
Sbjct: 531 HAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCS 590
Query: 237 LLILVSSDMAS----------AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
L I V + M S E IL++M ++ + SA TY LM Y++ GD + +
Sbjct: 591 LDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENI 650
Query: 287 LAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSA----------IVCFVNICFHWLE 333
L + SS V D Y +I+A G + + + +V + ++
Sbjct: 651 LTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVS 710
Query: 334 GPMMSQA----------GLEPSAQTYTKLMCGYAKHGDM 362
M +A G +P+ +TY ++ GY ++G +
Sbjct: 711 NSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKL 749
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++S Y ++ + KIL M++ +S +N+L++ +S+ D E ILT + +G
Sbjct: 599 MVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSG 658
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
+ P +Y ++ Y + G M + K LKP + F + VS+
Sbjct: 659 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIF------VKSYVSNS 712
Query: 245 M-ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
M A ++ M G +P+ +TY ++ GY ++G + +
Sbjct: 713 MFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 753
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 157/398 (39%), Gaps = 58/398 (14%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P + YN+L+ Y+ + ++E +G++P+ VTY LIS + G
Sbjct: 310 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLD------RAGK 363
Query: 140 IEGA-TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
I+ A + E +R+ P + +NALI H + AG P T+
Sbjct: 364 IDAAIVEYDEMVRNGCKP-NLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWN 422
Query: 199 KLMCGYAKHGDMDSIKTKIPSLK-----PQSELFLCF--SFQLTNLLILVSSDMASAEGI 251
L+ + ++G + +K P+ + ++ S+ L L A I
Sbjct: 423 TLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDL-------AMQI 475
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSSLV----N 296
M +AG+ P TY ++ A+ G + +L A+ S SSL+ N
Sbjct: 476 YKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYAN 535
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIV---CFVNICFH--------WLEGPMMSQAGLEPS 345
LD + AL+ + E I+ + +V VN + +LE + Q
Sbjct: 536 AKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLE---LRQKRCSLD 592
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN---GDYLDIIHALAVSGHGEYIDEIIS 402
++ Y K+ + + ++L+ S +N Y ++H + G E + I++
Sbjct: 593 INVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILT 652
Query: 403 KIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
+I+ G D ++ IY KGQ+ A R+ + +
Sbjct: 653 EIKSS-GVRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 689
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 9/150 (6%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + L + YN+L+ +Y + L +++S G+ P+R +Y + +I Y
Sbjct: 621 ESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSY------NTVIYAYG 674
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G ++ A+++ M+ +N + + + A ++ M G +P+ +
Sbjct: 675 RKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNER 734
Query: 196 TYTKLMCGYAKHGDMDSIK---TKIPSLKP 222
TY ++ GY ++G + K + +P L P
Sbjct: 735 TYNSIVEGYCRNGKLTDAKIFVSNLPQLHP 764
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 156/389 (40%), Gaps = 55/389 (14%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P D + YN ++ Y T+ L +G P++VTY LI+ C +G
Sbjct: 288 LPDDFT-YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY------CSLINGLCAEG 340
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++E A ++ + K V+N+L+ G + A ++ M++ G P QTY
Sbjct: 341 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 400
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMM 255
++ G K G++ + + L F+F N LI + SA ++ M
Sbjct: 401 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF---NTLIDGYCKRLKLDSALQLVERM 457
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHG 312
+ G+ P TY ++ G K G ++ V + G Y +I S
Sbjct: 458 WEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK- 516
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---L 369
++E S ++ MSQ GL P A ++ L+ G+ ++GD++ L L
Sbjct: 517 --MEEASKVIV------------KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKL 562
Query: 370 AQNGSSLVNGDYLDIIHA----LAVSGHGEYIDEIISKIQPGVGY--------SADAAN- 416
+ G S + +I A L + + DE++SK Y S AN
Sbjct: 563 EEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANV 622
Query: 417 -----HIYHLINKGQIDAAY---RIVNTL 437
H+ +I KG I + R++N+L
Sbjct: 623 DRAYMHLVEMIKKGFIPSMSTFGRVINSL 651
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 6/177 (3%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + + + + K+ +G+ P+ V++ LI +C++G++EGA
Sbjct: 504 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG------FCRNGDLEGAYL 557
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + + +K + + FN LI S +M AE I M G + TY L+ G
Sbjct: 558 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 617
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
K ++D + + + + +F + V+ + A GI+ +M + G+ P
Sbjct: 618 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 138/357 (38%), Gaps = 58/357 (16%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQ------------- 122
E + D+ YNAL+ ++ F + ++ +GI PN +TY
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLD 377
Query: 123 ----------------QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
LI+ + LI YC I+ ++L M + +N LI
Sbjct: 378 AAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTKIPSLKPQSE 225
+G D+ +A +L M +GL P T L+ G +G + D+++ K + +
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497
Query: 226 LFLCFSF-------QLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
L F Q N+LI + AE + M G+ P TY+ ++ G
Sbjct: 498 LDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557
Query: 276 KHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWL 332
K +D ++ GS + + + +I+ +G +D+ + C
Sbjct: 558 KQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR---VDDGLELFC--------- 605
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALA 389
M + G+ +A TY L+CG+ K G+++ + + SS V D + I + L
Sbjct: 606 ---EMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 138/344 (40%), Gaps = 58/344 (16%)
Query: 79 VPLDISHYNALLRVYLD-NEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+ DI +N L++ + ++ F+ + F K+ G+ P+ VT+ + L+ C +
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTF-GKITKLGLHPDVVTF------TTLLHGLCVE 162
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+ A M + T + F L+ G + + A +L M + GL+P+ TY
Sbjct: 163 DRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITY 222
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELF---LCFSFQLTNLLILVSSDMASAEGILTM 254
++ G K GD S + ++ S + + +S + +L + A+ + T
Sbjct: 223 GTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL--CKDGRHSDAQNLFTE 280
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
M + G+ P TY ++ G+ G +LL + ++ D Y +I+A G
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340
Query: 312 ----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
E DE M G+ P+ TY+ ++ G+ K +D+
Sbjct: 341 FFEAEELYDE-------------------MLPRGIIPNTITYSSMIDGFCKQNRLDAAEH 381
Query: 368 ---LLAQNGSS--------LVNG--------DYLDIIHALAVSG 392
L+A G S L++G D ++++H + +G
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETG 425
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 114/287 (39%), Gaps = 31/287 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+A++ + + +++ +GI P+ TY +I +C G A +
Sbjct: 258 YSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG------FCSSGRWSDAEQ 311
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M ++ +NALI + AE + M G+ P+ TY+ ++ G+
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371
Query: 206 KHGDMDSIKTK--IPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGL 260
K +D+ + + + K S + F N LI + + +L M++ GL
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITF-----NTLIDGYCGAKRIDDGMELLHEMTETGL 426
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVS 319
TY L+ G+ GD+++ LL + SS + D + L + +G+ D +
Sbjct: 427 VADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Query: 320 AIVCFVNICFHWLEGPMMSQ------AGLEPSAQTYTKLMCGYAKHG 360
F ++ G+EP QTY L+ G G
Sbjct: 487 M--------FKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEG 525
>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
gi|223948163|gb|ACN28165.1| unknown [Zea mays]
gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
Length = 786
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 129/324 (39%), Gaps = 22/324 (6%)
Query: 86 YNALLRVYLDNEHTFSP-TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
YN +L VY ++ L ++ + G+EP+ T S +I+ C+DG ++ A
Sbjct: 212 YNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFT------ASTVIAACCRDGLVDEAV 265
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
E ++ + +NAL+ +A + A +L M Q G +P A TY +L Y
Sbjct: 266 AFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTY 325
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
A+ G + + ++ + L F++ + A + M + G P+
Sbjct: 326 ARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNV 385
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF 324
TY ++ K + +L + S + + LAV G D V+ +
Sbjct: 386 NTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRV--- 442
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVNGDY 381
LEG M G+E S TY L+ Y + G + ++ + G + Y
Sbjct: 443 -------LEG--MRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTY 493
Query: 382 LDIIHALAVSGHGEYIDEIISKIQ 405
+++ L+ G I+SK++
Sbjct: 494 NALLNVLSRQGDWSTAQSIVSKMR 517
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 122/282 (43%), Gaps = 42/282 (14%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
T L + S G+E +R TY + LI+ Y + G+ A K+ M F +
Sbjct: 440 TRVLEGMRSCGVELSRDTY------NTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTY 493
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKP 222
NAL+ S+ D ++A+ I++ M G +P+ Q+Y+ L+ YAK G++ I +
Sbjct: 494 NALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYG 553
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA---GLEPSAQTYTKLMCGYAKHGD 279
+F S+ + L++ + +G+ T + G P + ++ YAK+G
Sbjct: 554 SGAVFP--SWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGM 611
Query: 280 -------MDSVRRLLAQSGSS---LVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICF 329
DS++R SG S + +D+ + S E I ++ + C
Sbjct: 612 YSKATEVFDSIKR----SGLSPDLITYNSLMDMYAKCSESWEAEKI--LNQLKC------ 659
Query: 330 HWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
SQ ++P +Y ++ G+ K G + +R+L++
Sbjct: 660 --------SQT-MKPDVVSYNTVINGFCKQGLVKEAQRVLSE 692
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 115/297 (38%), Gaps = 32/297 (10%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I+ YNALL V + ++K+ ++G +PN +Y S L+ Y + GN+ G
Sbjct: 490 ITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSY------SLLLQCYAKGGNVAG 543
Query: 143 ATKILE--FMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
I + FP S + L+ + + + E + G P + +
Sbjct: 544 IAAIENEVYGSGAVFP-SWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSM 602
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS-QAG 259
+ YAK+G S+K ++ + S+ AE IL +
Sbjct: 603 LSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQT 662
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHG--EY 314
++P +Y ++ G+ K G + +R+L++ G + Y H L V G+ E
Sbjct: 663 MKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTY----HTL-VGGYSSLEM 717
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
E ++ + M Q GL+P TY +++ Y + + R L++
Sbjct: 718 FSEAREVIGY------------MVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSE 762
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLE-SQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ YN+L+ +Y ++ L +L+ SQ ++P+ V+Y +I+ +C+ G +
Sbjct: 630 DLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVING------FCKQGLV 683
Query: 141 EGATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A ++L E + D P + ++ L+ G+S + A ++ M Q GL+P TY +
Sbjct: 684 KEAQRVLSEMVADGMAPCAV-TYHTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRR 742
Query: 200 LMCGYAK 206
++ Y +
Sbjct: 743 VVESYCR 749
>gi|242054647|ref|XP_002456469.1| hypothetical protein SORBIDRAFT_03g036880 [Sorghum bicolor]
gi|241928444|gb|EES01589.1| hypothetical protein SORBIDRAFT_03g036880 [Sorghum bicolor]
Length = 392
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 18/180 (10%)
Query: 138 GNIEGATKILEFMRDKTFPISEGV------FNALIYGHSQANDMASAEGILTMMSQAGLE 191
GN A ++ + TFP + GV FNA+I +++ + S + M + GL+
Sbjct: 149 GNHTEAARVFQ-----TFPDAHGVKPNTETFNAIIKSFAESGTIRSFYSVFDEMCKKGLK 203
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS--ELFLCFSFQLTNLLILVSSDMASAE 249
P+A T+T + G+ K D + + +K E ++ ++ +L L S A A
Sbjct: 204 PNATTFTTALAGFYKEERFDDVGKVLELMKKNGCGESLPVYNVRVQSLCKLGRSGEARA- 262
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
++ M + G +PS TY L+ G+ K GD++ +RL + G + GD Y +IH L
Sbjct: 263 -LVDEMVKKGTKPSWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGDINFYFMLIHYL 321
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 90/238 (37%), Gaps = 65/238 (27%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQA-GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
NALI+ + + A + A G++P+ +T+ ++ +A+ G + S +
Sbjct: 138 LNALIFACIVSGNHTEAARVFQTFPDAHGVKPNTETFNAIIKSFAESGTIRSFYS----- 192
Query: 221 KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
+ M + GL+P+A T+T + G+ K
Sbjct: 193 ------------------------------VFDEMCKKGLKPNATTFTTALAGFYKEERF 222
Query: 281 DSVRRLLA-----QSGSSL-VNGDYLDIIHALAVSGHGE-YIDEVSAIVCFVNICFHWLE 333
D V ++L G SL V + + L SG +DE
Sbjct: 223 DDVGKVLELMKKNGCGESLPVYNVRVQSLCKLGRSGEARALVDE---------------- 266
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHAL 388
M + G +PS TY L+ G+ K GD++ +RL + G + GD Y +IH L
Sbjct: 267 ---MVKKGTKPSWVTYNHLIYGFCKEGDLEEAKRLYKEMGRKGLVGDINFYFMLIHYL 321
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 87/205 (42%), Gaps = 8/205 (3%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+NA+++ + ++ S ++ +G++PN T+ ++ + ++ + K
Sbjct: 174 FNAIIKSFAESGTIRSFYSVFDEMCKKGLKPNATTFTTALAG------FYKEERFDDVGK 227
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+LE M+ S V+N + + A ++ M + G +PS TY L+ G+
Sbjct: 228 VLELMKKNGCGESLPVYNVRVQSLCKLGRSGEARALVDEMVKKGTKPSWVTYNHLIYGFC 287
Query: 206 KHGDMDSIKTKIPSLKPQSELF-LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
K GD++ K + + + + F F L + L D +A G+ ++ P
Sbjct: 288 KEGDLEEAKRLYKEMGRKGLVGDINFYFMLIHYLC-KGDDFDTALGVYNEIAAKNWVPCF 346
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQ 289
T L+ G A +D + ++ +
Sbjct: 347 STMKMLVNGLAGSSRIDEAKGIIEK 371
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 156/373 (41%), Gaps = 40/373 (10%)
Query: 75 GELDVPLDISHYNALL----RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKL 130
G+L P ++ YN ++ +V L NE D +++ S+GI P+ VTY LIS
Sbjct: 205 GKLVQP-NVVMYNTIIDSMCKVKLVNE----AFDLYSEMVSKGISPDVVTYNALISG--- 256
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
+C G ++ AT + M + + FN L+ G + + A+ +L MM + G+
Sbjct: 257 ---FCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGI 313
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
+P TY LM Y +++ K ++ + S+ + + A
Sbjct: 314 KPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMN 373
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
+ M + P TY L+ G K G + +L+ + V D + L
Sbjct: 374 LFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALC 433
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+D+ A++ M G++P TYT L+ G K+G ++ R +
Sbjct: 434 KNHQVDKAIALL------------TKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFE 481
Query: 371 QNGSSLVNGDYLDI-IHALAVSG---HGEYID--EIISKIQPGVGYSADAANH---IYHL 421
LV G LD+ I+ + G HG + + +++SK++ G +A + I L
Sbjct: 482 ---DLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEEN-GCIPNAVTYEIIICSL 537
Query: 422 INKGQIDAAYRIV 434
+K + D A +++
Sbjct: 538 FDKDENDKAEKLL 550
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 115/294 (39%), Gaps = 26/294 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ +N L+ + + LA + QGI+P+ TY + L+ +YC +
Sbjct: 281 NVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTY------NSLMDRYCLVKEVN 334
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A I + + + ++ +I+G + + A + M + P TY L+
Sbjct: 335 KAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLI 394
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K G + + + + ++ + + + A +LT M G++
Sbjct: 395 DGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQ 454
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI-IHALAVSG---HGEYIDE 317
P TYT L+ G K+G ++ R + LV G LD+ I+ + G HG + +
Sbjct: 455 PDICTYTTLVDGLCKNGRLEDARIVFE---DLLVKGYILDVNIYTAMIQGFCSHGLFDES 511
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ + M + G P+A TY ++C + D +LL +
Sbjct: 512 LDLL-------------SKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLRE 552
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 114/316 (36%), Gaps = 71/316 (22%)
Query: 101 SPTDF--LAKLESQGIEPNRVTYQQLI-----------------------------SNSK 129
+P F LAK+ G EPN +T LI S
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI+ C+ G A ++L + K + ++N +I + + A + + M G
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTN-----LLILVSS- 243
+ P TY L+ G+ G M K ++LF F+ N ILV
Sbjct: 243 ISPDVVTYNALISGFCIVGKM----------KDATDLFNKMIFENINPNVYTFNILVDGF 292
Query: 244 ----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDY 299
+ A+ +L MM + G++P TY LM Y +++ + + VN +
Sbjct: 293 CKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPN- 351
Query: 300 LDIIHALAVSGHG----EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCG 355
IH+ ++ HG + +DE + M + P TY L+ G
Sbjct: 352 ---IHSYSIMIHGFCKIKKVDEAMNLF------------KEMHCNNIIPDVVTYNSLIDG 396
Query: 356 YAKHGDMDSIRRLLAQ 371
K G + +L+ +
Sbjct: 397 LCKLGKISYALKLVDE 412
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 209 DVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTF------TTLIDGHCKNGRVD 262
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A ++ MS GL+ TYT L+
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLI 322
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+D+ + ++ ++ + AE +L M GL+
Sbjct: 323 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 382
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL 287
P TYT ++ + K GD+ +LL
Sbjct: 383 PDTXTYTMIINEFCKKGDVWKGSKLL 408
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 39/297 (13%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIP 218
FN L++ + D+ A+ + +++ GL PS +Y LM GY + GD++ +K+ +
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202
Query: 219 SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ Q +++ +S + L S M A + M GL P+ T+T L+ G+ K+G
Sbjct: 203 ASGVQPDVY-TYSVLINGL--CKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNG 259
Query: 279 DMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCFVNICFHW 331
+D + Q S + D Y +I+ L G + IDE
Sbjct: 260 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE-------------- 305
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI---RRLLAQNGSSLVNGDYLDIIHAL 388
MS GL+ TYT L+ G K GD+D+ R+ + Q L + Y +I L
Sbjct: 306 -----MSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGL 360
Query: 389 AVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSAN 442
G ++++ ++ VG D + I KG + +++ + R+ +
Sbjct: 361 CQEGRSVDAEKMLREMLS-VGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGH 416
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 84/191 (43%), Gaps = 6/191 (3%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
++ L K+ G PN VTY I C+ G A ++++ + K P++ F
Sbjct: 230 SEILGKIYMSGETPNVVTYGTYIKG------LCKVGLFGVAWRLIQNLCRKNQPLNNHCF 283
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKP 222
NA+IYG Q + A + M +G+ P +Y+ L+ G+ + G +D ++
Sbjct: 284 NAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRN 343
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
L +S+ + + A + M +G+ P +Y+ L+ G+ + GDMDS
Sbjct: 344 SGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDS 403
Query: 283 VRRLLAQSGSS 293
+ + S+
Sbjct: 404 AIKFWEEMTSN 414
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 117/293 (39%), Gaps = 24/293 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I Y+ L+ + + ++++ GI P+ +Y S LI +C+ G+++
Sbjct: 349 NIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSY------SILIDGFCRKGDMD 402
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K E M F S + +LI G+ ++ A+A +M + G+ P ++
Sbjct: 403 SAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHIL 462
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
Y + D + + F +S+ I S A +L +M + +
Sbjct: 463 SIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVL 522
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P Y+ L+ +AK + + L + + G + Y +I+ L +S
Sbjct: 523 PDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILIN-LFISD-------- 573
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
C +++ + +G M ++ + P YT L+ G+ G+M R L +
Sbjct: 574 ----CKMDVAYRLFKG--MKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDE 620
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 119/289 (41%), Gaps = 36/289 (12%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
PL+ +NA++ ++ ++++ GI P+ +Y S LI +C+ G
Sbjct: 277 PLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSY------SILIDGFCRKGR 330
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
++ A+++ + MR+ + ++ LI G + + A + M +G+ P +Y+
Sbjct: 331 VDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSI 390
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSEL----FLCFSFQLTNLL--ILVSSDMASAEGILT 253
L+ G+ + GDMDS ++K E+ F +F +L+ S A+A
Sbjct: 391 LIDGFCRKGDMDS------AIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFR 444
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSG 310
+M + G+ P ++ Y + D + L ++G Y + IH +
Sbjct: 445 IMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRIC--- 501
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
G ++ ++ P+M + + P Y+ L+ +AK
Sbjct: 502 RGSVPEKALQLL------------PVMLKRNVLPDVVNYSTLISCFAKR 538
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 83/214 (38%), Gaps = 17/214 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ +Y+ L+ + ++ K+ GI N TY + LI+ + D ++
Sbjct: 524 DVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTY------TILINLFISDCKMD 577
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + M++ + + +L+ G +M A + MS+ G P+ TYT +
Sbjct: 578 VAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFI 637
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y K + K K + P L+ N + +M AE + M
Sbjct: 638 NEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCN-----TGEMNRAEALFDEMK 692
Query: 257 QAG-LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
Q G P+ YT L+ Y K D +L +
Sbjct: 693 QEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEE 726
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 120/326 (36%), Gaps = 45/326 (13%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
LDV ++ L++V+ N + + GIE N ++S + L+ +
Sbjct: 130 LDVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELN------IMSCNFLLKCLVE 183
Query: 137 DGNIEGATKILEFMRD-------KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
D ++G + E + T+ I + N G + D+ A IL + +G
Sbjct: 184 DNRVDGVRLLFEVLIKFGPRPNIHTYTI---MMNFFCRGVGCSVDIRRASEILGKIYMSG 240
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
P+ TY + G K G I +L +++ F + + A
Sbjct: 241 ETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEAS 300
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
+ M +G+ P +Y+ L+ G+ + G +D + + +S + + Y +I
Sbjct: 301 EVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGF 360
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G + EV M +G+ P +Y+ L+ G+ + GDMDS
Sbjct: 361 CKEGRVDKALEVFE---------------EMKNSGILPDVYSYSILIDGFCRKGDMDSAI 405
Query: 367 RLL-----------AQNGSSLVNGDY 381
+ A N SL+ G Y
Sbjct: 406 KFWEEMTSNNFSPSAFNYCSLIKGYY 431
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 111/290 (38%), Gaps = 44/290 (15%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNALL + ++ G P+ VTY L+ +C+ G ++ A K
Sbjct: 88 YNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHG------FCKVGKLDEALK 141
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I + + F +NALI G +A+ + A+ IL M L P TY L+ G
Sbjct: 142 IFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLC 201
Query: 206 KHGDMDSIKTKI------PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
K+G +D + I P++ S L +L L SA +L M G
Sbjct: 202 KNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRL--------ESARQLLEKMVLNG 253
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG------DYLDIIHALAVSGHGE 313
+P +Y L+ G A+ + +L GS L G Y +I L
Sbjct: 254 CKPDIVSYNALIHGLAREQGVSEALKLF---GSVLRQGYEPEVPTYNILIDGLLKEDR-- 308
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
VN F G + + GLEP A TYT + G K G ++
Sbjct: 309 -----------VNEAFELFSG--LVKHGLEPDAITYTVFIDGLCKAGRVE 345
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 27/225 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKL--------ISKYCQD 137
Y+ L+R+Y + +T + L+S IE +QL+ IS C+
Sbjct: 5 YDKLVRIYSPDAYTVGIL-LRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRA 63
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
I A + + MR F + +NAL+ G M+ A+ + M +AG P TY
Sbjct: 64 SRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTY 123
Query: 198 TKLMCGYAKHGDMDSI---------KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASA 248
L+ G+ K G +D + +P + + L F + + A
Sbjct: 124 NTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFC---------KADKLDEA 174
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293
+ IL M L P TY L+ G K+G +D R L+ G S
Sbjct: 175 QRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFS 219
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 125/290 (43%), Gaps = 37/290 (12%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D+ YNAL+ + + L ++ S+ + P+ VTY L++ C++G
Sbjct: 152 VP-DVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNG------LCKNG 204
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYG-HSQANDMASAEGILTMMSQAGLEPSAQTY 197
++ A ++ DK F + ++ LI G + + SA +L M G +P +Y
Sbjct: 205 RVDEARMLIV---DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSY 261
Query: 198 TKLMCGYAK-HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI--LVSSDMAS-AEGILT 253
L+ G A+ G +++K L+ E N+LI L+ D + A + +
Sbjct: 262 NALIHGLAREQGVSEALKLFGSVLRQGYEP----EVPTYNILIDGLLKEDRVNEAFELFS 317
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAVSG-- 310
+ + GLEP A TYT + G K G ++ +L G D++ H ++G
Sbjct: 318 GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDE---KGCVPDVVSHNAVINGLC 374
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+ +DE + L G M G P+A ++ L+CG + G
Sbjct: 375 KEKRVDEAEVL----------LSG--MEAKGCSPNAISFNTLICGQCRAG 412
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 81/236 (34%), Gaps = 61/236 (25%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQ------------------- 122
++ YN L+ L + + + L G+EP+ +TY
Sbjct: 292 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 351
Query: 123 ----------QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
++S++ +I+ C++ ++ A +L M K + FN LI G +A
Sbjct: 352 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 411
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
A M + G++P+ TY L+ G K IK I
Sbjct: 412 GKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAIT-------------- 457
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
+ M + G P TY+ L+ G K G +D RRLL
Sbjct: 458 ------------------LFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLG 495
Score = 48.1 bits (113), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 90/249 (36%), Gaps = 54/249 (21%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ + G IE A + +E + K FN I G +A+ + A+ + M + G
Sbjct: 22 LLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVFDGMRKHG 80
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
P+ TY L+ G G M + A+
Sbjct: 81 FWPNRITYNALLSGLCNGGRM-----------------------------------SDAQ 105
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAV 308
+ M +AG P TY L+ G+ K G +D ++ ++ G D++ + +
Sbjct: 106 ALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIF---DGAVKRGFVPDVVTYNALI 162
Query: 309 SG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
+G + +DE I+ M L P TY L+ G K+G +D R
Sbjct: 163 NGFCKADKLDEAQRIL------------QRMVSESLVPDVVTYNSLVNGLCKNGRVDEAR 210
Query: 367 RLLAQNGSS 375
L+ G S
Sbjct: 211 MLIVDKGFS 219
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 152/359 (42%), Gaps = 67/359 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ ++AL+ V++ + ++ ++GI P+ +TY LI +C++ +
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG------FCKENCLH 367
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + M K ++ LI + +A + + +S GL P+ TY L+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ + G +++ K ELF M G+
Sbjct: 428 LGFCQSGKLNAAK----------ELF-------------------------QEMVSRGVP 452
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
PS TY L+ G +G+++ + + +S +L G Y IIH + + +D+
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC---NASKVDDA 509
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM---DSIRRLLAQNGSS 375
++ C +S G++P TY ++ G K G + D + R + ++G +
Sbjct: 510 WSLFC------------SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 557
Query: 376 LVNGDYLDIIHA-LAVSGHGEYIDEIISKIQPGVGYSADAA--NHIYHLINKGQIDAAY 431
+ Y +I A L SG + E+I +++ G+SAD++ + +++ ++D ++
Sbjct: 558 PDDFTYNILIRAHLGGSGLISSV-ELIEEMKV-CGFSADSSTIKMVIDMLSDRRLDKSF 614
Score = 45.8 bits (107), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 118/342 (34%), Gaps = 105/342 (30%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++E +GI+ + VTY S LI C DG + K+L M + F+ALI
Sbjct: 270 EMEMKGIKADVVTY------SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID 323
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
+ + A+ + M G+ P TY L+ G+ K L +++F
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN----------CLHEANQMF 373
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+M G EP TY+ L+ Y K +D RL
Sbjct: 374 -------------------------DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 408
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
+ +S GL P+
Sbjct: 409 RE-----------------------------------------------ISSKGLIPNTI 421
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGS-----SLVNGDYLDIIHALAVSGHGEYIDEIIS 402
TY L+ G+ + G +++ + L + S S+V Y ++ L +G EI
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT--YGILLDGLCDNGELNKALEIFE 479
Query: 403 KIQP-----GVGYSADAANHIYH-LINKGQIDAAYRIVNTLA 438
K+Q G+G N I H + N ++D A+ + +L+
Sbjct: 480 KMQKSRMTLGIG----IYNIIIHGMCNASKVDDAWSLFCSLS 517
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 174/448 (38%), Gaps = 96/448 (21%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y AL+ YL S + + S+G PN VTY + LI +C+ G IE
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY------TALIDGHCKSGQIE 602
Query: 142 GATKILEFMR--------DKTFPISEG--------------------------------- 160
A +I MR D F I +G
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVM 662
Query: 161 ----------VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210
V++ALI G + + A+ + T MS+ G P+ TY+ L+ K +
Sbjct: 663 SVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRL 722
Query: 211 DSIKTKIPSLKPQSEL---FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTY 267
D + K+ S ++ + ++ + L + +D A +++MM + G P+ TY
Sbjct: 723 D-LALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD--EAYRLMSMMEEKGCHPNVVTY 779
Query: 268 TKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYIDEVSAIVCF 324
T ++ G+ K G +D L+ Q G+ +++ +I+ +G +D+ ++
Sbjct: 780 TAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG---LLDDAHQLL-- 834
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH-----GDMDSIRRLLAQNGSSLVNG 379
M Q Y K++ G+ + G +D I A+N + +
Sbjct: 835 ----------DEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEI----AENVAVPIIP 880
Query: 380 DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINK----GQIDAAYRIVN 435
Y +I + +G E E+ ++ YSA + LI ++D A+ +
Sbjct: 881 AYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYA 940
Query: 436 TLARSANINGEQLPVGGFLVRHMVKTNQ 463
+ + I +L + +LV+ +++ N+
Sbjct: 941 DMIKRGGI--PELSIFFYLVKGLIRINR 966
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 141/337 (41%), Gaps = 55/337 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D S Y+ ++ + + + +++S + P+ TY + LI +C+ G ++
Sbjct: 479 DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY------TILIDSFCKVGLLQ 532
Query: 142 GATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A K E +RD P + + ALI+ + +A M+SA + MM G P+ TYT L
Sbjct: 533 QARKWFDEMVRDGCAP-NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTAL 591
Query: 201 MCGYAKHGDMDSIKTKIPSLK-----PQSELFL-----------CFSFQLTNLLILVSSD 244
+ G+ K G ++ ++ P +++ F++ + +
Sbjct: 592 IDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHK 651
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSS 293
+ A +L +MS G EP+ Y L+ G+ K G +D + + + + SS
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSS 711
Query: 294 LVNGDYLDIIHALAVSGHGEYIDEVSA--IVCFVNICFHWLEG--------------PMM 337
L++ + D LA+ ++ A ++ + + ++G MM
Sbjct: 712 LIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEM----IDGLCKVGKTDEAYRLMSMM 767
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGS 374
+ G P+ TYT ++ G+ K G +D L+ Q G+
Sbjct: 768 EEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA 804
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 119/330 (36%), Gaps = 70/330 (21%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
LA +E + + + V Y Q+IS C+ E A L MR + + + L
Sbjct: 287 LALIEKEEFKLDTVIYTQMISG------LCEASLFEEAMDFLSRMRSSSCIPNVVTYRIL 340
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI------------ 213
+ G + + + IL+MM G PS + + L+ Y + GD
Sbjct: 341 LCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGC 400
Query: 214 ----------------KTKIPSL-------KPQSELF----LCFSFQLTNL--LILVSSD 244
K+PSL K E+ + ++NL + +
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLD 301
A I+ M G P TY+K++ +D+ L + S+ V D Y
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520
Query: 302 IIHALAVSG----HGEYIDEVSAIVCFVNICFH------WLEGPMMSQA----------G 341
+I + G ++ DE+ C N+ + +L+ MS A G
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
P+ TYT L+ G+ K G ++ ++ A+
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYAR 610
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 156/389 (40%), Gaps = 55/389 (14%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P D + YN ++ Y T+ L +G P++VTY LI+ C +G
Sbjct: 287 LPDDFT-YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY------CSLINGLCAEG 339
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++E A ++ + K V+N+L+ G + A ++ M++ G P QTY
Sbjct: 340 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 399
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMM 255
++ G K G++ + + L F+F N LI + SA ++ M
Sbjct: 400 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF---NTLIDGYCKRLKLDSALQLVERM 456
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHG 312
+ G+ P TY ++ G K G ++ V + G Y +I S
Sbjct: 457 WEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK- 515
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---L 369
++E S ++ MSQ GL P A ++ L+ G+ ++GD++ L L
Sbjct: 516 --MEEASKVIV------------KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKL 561
Query: 370 AQNGSSLVNGDYLDIIHA----LAVSGHGEYIDEIISKIQPGVGY--------SADAAN- 416
+ G S + +I A L + + DE++SK Y S AN
Sbjct: 562 EEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANV 621
Query: 417 -----HIYHLINKGQIDAAY---RIVNTL 437
H+ +I KG I + R++N+L
Sbjct: 622 DRAYMHLVEMIKKGFIPSMSTFGRVINSL 650
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 6/177 (3%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + + + + K+ +G+ P+ V++ LI +C++G++EGA
Sbjct: 503 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG------FCRNGDLEGAYL 556
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + + +K + + FN LI S +M AE I M G + TY L+ G
Sbjct: 557 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 616
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
K ++D + + + + +F + V+ + A GI+ +M + G+ P
Sbjct: 617 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 673
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 135/331 (40%), Gaps = 54/331 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D + YN L+ + + + + ++ Q + P++ Y + LI + ++ +++
Sbjct: 503 DANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVY------TTLIDGFIRNESLD 556
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A KI EFM K +NA+I G+ Q M A ++ M + G P TYT L+
Sbjct: 557 EARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLI 616
Query: 202 CGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
GYAK G++ S+ + + Q + + +S + L +D +AE + M
Sbjct: 617 GGYAKQGNISGALSLLCDMMKRRCQPNV-VAYSSLINGYCKLGDTD--AAECLFGSMESQ 673
Query: 259 GLEPSAQTYTKLM-----------------------CG---YAKH----GDMDSVRRLLA 288
GL P+ TYT L+ C Y H G +S+ +++
Sbjct: 674 GLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIIS 733
Query: 289 QSGSSLVN----GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM------MS 338
SS VN G LDI AL +AI+ ++C H + G M+
Sbjct: 734 SHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAII--FSLCIHNMLGEALDLKNKMA 791
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G +P + T+ L+ G+ G R +L
Sbjct: 792 NKGYKPDSATFLSLLYGFCSVGKSREWRTIL 822
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 135/323 (41%), Gaps = 45/323 (13%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E +P ++ YN+++ L ++ + G +P+ +T+ S LIS C
Sbjct: 357 ERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITF------STLISGLC 410
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
Q+G ++ A ++L + + +LI+G ++ A +L M + G P
Sbjct: 411 QEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVV 470
Query: 196 TYTKLMCGYAKHGDMDS---IKTKIPS--LKPQSELFLCFSFQLTNLLI--LVSSDM-AS 247
T+ L+ G G + ++ K+ + L P + ++ N+LI L M +
Sbjct: 471 TFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIY--------NVLISGLCKKKMLPA 522
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
A ++ M + + P YT L+ G+ ++ +D R++ ++ D + +
Sbjct: 523 ARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVG--YNAM 580
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM----- 362
+ G+ ++ A+ C M + G P TYT L+ GYAK G++
Sbjct: 581 IKGYCQFGMMNEAVECMST----------MRKVGRIPDEFTYTTLIGGYAKQGNISGALS 630
Query: 363 ---DSIRRLLAQNG---SSLVNG 379
D ++R N SSL+NG
Sbjct: 631 LLCDMMKRRCQPNVVAYSSLING 653
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 122/315 (38%), Gaps = 57/315 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ Y L ++E++G+ P VTY L+S + G++E
Sbjct: 297 YNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTY------GTLMSWLGRKGDLEKIAS 350
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L MR++ P + ++N++I + + A +L M G +P A T++ L+ G
Sbjct: 351 LLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLC 410
Query: 206 KHGDMDSIKTKI---------PSLKPQSELFLCFSFQ-----LTNLLI------------ 239
+ G + + + P+L + L F + +NLL+
Sbjct: 411 QEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVV 470
Query: 240 ---------LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
+V+ ++ A + M+ L P A Y L+ G K + + R L+ +
Sbjct: 471 TFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEM 530
Query: 291 GSSLVNGDYLDIIHALAVSG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
V+ D ++ + G E +DE I F M Q G+ P
Sbjct: 531 LEQNVHPD--KYVYTTLIDGFIRNESLDEARKIFEF------------MEQKGIHPDVVG 576
Query: 349 YTKLMCGYAKHGDMD 363
Y ++ GY + G M+
Sbjct: 577 YNAMIKGYCQFGMMN 591
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 113/275 (41%), Gaps = 24/275 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++S Y +L+ + ++ L ++ +G P+ VT+ LI + G +
Sbjct: 433 NLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVA------GQVS 486
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + E M + ++N LI G + + +A ++ M + + P YT L+
Sbjct: 487 EALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLI 546
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSEL---FLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
G+ ++ +D + KI Q + + ++ + M A ++ M +
Sbjct: 547 DGFIRNESLDEAR-KIFEFMEQKGIHPDVVGYNAMIKGYCQF--GMMNEAVECMSTMRKV 603
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
G P TYT L+ GYAK G++ LL + + ++ ++G+ + D
Sbjct: 604 GRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNV--VAYSSLINGYCKLGDTD 661
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
+A F G M SQ GL P+ TYT L+
Sbjct: 662 AAECLF---------GSMESQ-GLFPNVITYTILI 686
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 130/324 (40%), Gaps = 22/324 (6%)
Query: 86 YNALLRVYLDNEHTFSP-TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
YN +L VY ++ L ++ + G+EP+ T S +I+ C+DG ++ A
Sbjct: 211 YNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDDFT------ASTVIAACCRDGLVDEAV 264
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
E ++ + +NAL+ +A + A +L M Q G +P A TY +L Y
Sbjct: 265 AFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTY 324
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
A+ G + + ++ + L F++ + A + M ++G P+
Sbjct: 325 ARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNV 384
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF 324
TY ++ K + +L + S + + LAV G D V+ +
Sbjct: 385 NTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRV--- 441
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVNGDY 381
LEG M G+E S TY L+ Y + G + ++ + G + Y
Sbjct: 442 -------LEG--MKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTY 492
Query: 382 LDIIHALAVSGHGEYIDEIISKIQ 405
+++ L+ G I+SK++
Sbjct: 493 NALLNVLSRQGDWSTAQSIVSKMR 516
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 137/351 (39%), Gaps = 71/351 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+++ YN +L + + L ++ G PNRVT+ +++ C +E
Sbjct: 383 NVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLA-------VCGKRGME 435
Query: 142 G-ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
T++LE M+ +S +N LI + + +A + M+ AG P TY L
Sbjct: 436 DYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNAL 495
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ ++ GD ++A+ I++ M G
Sbjct: 496 LNVLSRQGDW-----------------------------------STAQSIVSKMRTKGF 520
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS--------GHG 312
+P+ Q+Y+ L+ YAK G++ + + + V ++ I+ L ++ G
Sbjct: 521 KPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWV-ILRTLVIANFKCRRLGGIE 579
Query: 313 EYIDEVSA------IVCFVNICFHWLEGPMMS----------QAGLEPSAQTYTKLMCGY 356
+ EV A +V F ++ + + M S Q+GL P TY LM Y
Sbjct: 580 KAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMY 639
Query: 357 AKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI 404
AK + ++L Q SS V D Y +I+ G + I+S++
Sbjct: 640 AKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEM 690
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 144/350 (41%), Gaps = 75/350 (21%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
T L ++S G+E +R TY + LI+ Y + G+ A K+ M F +
Sbjct: 439 TRVLEGMKSCGVELSRDTY------NTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTY 492
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD---MDSIKTKI-- 217
NAL+ S+ D ++A+ I++ M G +P+ Q+Y+ L+ YAK G+ +D+I+ ++
Sbjct: 493 NALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYG 552
Query: 218 ----PSLKPQSEL----FLCF-------SFQLTNL------LILVSS--DMASAEG---- 250
PS L F C +FQ L++ +S M + G
Sbjct: 553 GTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSK 612
Query: 251 ---ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIH 304
I + Q+GL P TY LM YAK + ++L Q SS V D Y +I+
Sbjct: 613 VTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVIN 672
Query: 305 ALAVSGHGEYIDEVSAIV----------CFVNICFHWLEG-----PMMSQA--------- 340
G I E I+ C V +H L G M S+A
Sbjct: 673 GFCKQG---LIKEAQRILSEMIADGMAPCVVT--YHTLVGGYASLEMFSEAREVINYMIQ 727
Query: 341 -GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALA 389
L+P TY +++ Y K + R L++ + N D ++H LA
Sbjct: 728 HNLKPMELTYRRVVDSYCKAKRFEEARSFLSEVSETDPNFDK-KVLHTLA 776
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN+L+ +Y ++ L +L+S ++P+ V+Y +I+ +C+ G I+
Sbjct: 628 DLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVING------FCKQGLIK 681
Query: 142 GATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A +IL E + D P ++ L+ G++ + A ++ M Q L+P TY ++
Sbjct: 682 EAQRILSEMIADGMAPCVV-TYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRV 740
Query: 201 MCGYAKHGDMDSIKT 215
+ Y K + ++
Sbjct: 741 VDSYCKAKRFEEARS 755
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+ PN VT+ + LI +C++G ++ A +I + M ++ +N LIYG +
Sbjct: 235 KGLVPNGVTF------TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-IKTKIPSLKPQSEL-FLC 229
D+ A+ ++ M GL+P TYT L+ G K GD+++ + + +K L +
Sbjct: 289 KGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
++ ++ L S AE +L M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 349 YTALISGLCQEGRS--VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 129/305 (42%), Gaps = 43/305 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS ++ LM GY K GD++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
M GL+P TYT L+ G K GD+++ R+ + + L + Y
Sbjct: 302 ------------MIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 382 LDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
+I L G + + E++S ++P +G N KG + +++
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLLKE 406
Query: 437 LARSA 441
+ R
Sbjct: 407 MQRDG 411
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 119/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 IMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 141/337 (41%), Gaps = 55/337 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D S Y+ ++ + + + +++S + P+ TY + LI +C+ G ++
Sbjct: 479 DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY------TILIDSFCKVGLLQ 532
Query: 142 GATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A K E +RD P + + ALI+ + +A M+SA + MM G P+ TYT L
Sbjct: 533 QARKWFDEMVRDGCAP-NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTAL 591
Query: 201 MCGYAKHGDMDSIKTKIPSLK-----PQSELFL-----------CFSFQLTNLLILVSSD 244
+ G+ K G ++ ++ P +++ F++ + +
Sbjct: 592 IDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHK 651
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSS 293
+ A +L +MS G EP+ Y L+ G+ K G +D + + + + SS
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSS 711
Query: 294 LVNGDYLDIIHALAVSGHGEYIDEVSA--IVCFVNICFHWLEG--------------PMM 337
L++ + D LA+ ++ A ++ + + ++G MM
Sbjct: 712 LIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEM----IDGLCKVGKTDEAYRLMSMM 767
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGS 374
+ G P+ TYT ++ G+ K G +D L+ Q G+
Sbjct: 768 EEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA 804
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 174/448 (38%), Gaps = 96/448 (21%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y AL+ YL S + + S+G PN VTY + LI +C+ G IE
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY------TALIDGHCKSGQIE 602
Query: 142 GATKILEFMR--------DKTFPISEG--------------------------------- 160
A +I MR D F I +G
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVM 662
Query: 161 ----------VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210
V++ALI G + + A+ + T MS+ G P+ TY+ L+ K +
Sbjct: 663 SVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRL 722
Query: 211 DSIKTKIPSLKPQSEL---FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTY 267
D + K+ S ++ + ++ + L + +D A +++MM + G P+ TY
Sbjct: 723 D-LALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD--EAYRLMSMMEEKGCHPNVVTY 779
Query: 268 TKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYIDEVSAIVCF 324
T ++ G+ K G +D L+ Q G+ +++ +I+ +G +D+ ++
Sbjct: 780 TAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG---LLDDAHQLL-- 834
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH-----GDMDSIRRLLAQNGSSLVNG 379
M Q Y K++ G+ + G +D I A+N + +
Sbjct: 835 ----------DEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEI----AENVAVPIIP 880
Query: 380 DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINK----GQIDAAYRIVN 435
Y +I + +G E E+ ++ YSA + LI ++D A+ +
Sbjct: 881 AYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYA 940
Query: 436 TLARSANINGEQLPVGGFLVRHMVKTNQ 463
+ + I +L + +LV+ +++ N+
Sbjct: 941 DMIKRGGI--PELSIFFYLVKGLIRINR 966
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 119/330 (36%), Gaps = 70/330 (21%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
LA +E + + + V Y Q+IS C+ E A L MR + + + L
Sbjct: 287 LALIEKEEFKLDTVIYTQMISG------LCEASLFEEAMDFLSRMRSSSCIPNVVTYRIL 340
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI------------ 213
+ G + + + IL+MM G PS + + L+ Y + GD
Sbjct: 341 LCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGC 400
Query: 214 ----------------KTKIPSL-------KPQSELF----LCFSFQLTNL--LILVSSD 244
K+PSL K E+ + ++NL + +
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLD 301
A I+ M G P TY+K++ +D+ L + S+ V D Y
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520
Query: 302 IIHALAVSG----HGEYIDEVSAIVCFVNICFH------WLEGPMMSQA----------G 341
+I + G ++ DE+ C N+ + +L+ MS A G
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
P+ TYT L+ G+ K G ++ ++ A+
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYAR 610
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 126/329 (38%), Gaps = 65/329 (19%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQG---IEPNRVTYQQLISNSKLIS 132
EL D+ YNAL++ + + + L + + G PN V+Y S +I
Sbjct: 158 ELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSY------STIID 211
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ ++G ++ A + + M + FP +++LI G +A M AE IL M G+ P
Sbjct: 212 GFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMP 271
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ +TY ++ GY G ++ A +L
Sbjct: 272 NTRTYNIMIRGYCSLGQLE-----------------------------------EAVRLL 296
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVS 309
MS +GL+P TY L+ Y K G R + + + G + Y ++H A
Sbjct: 297 KKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATK 356
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL- 368
G ID + +M + G+ + + L+C YAKHG +D
Sbjct: 357 --GALIDVRDLL-------------DLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAF 401
Query: 369 --LAQNGSSLVNGDYLDIIHALAVSGHGE 395
+ QNG Y +IH L G E
Sbjct: 402 TEMRQNGLRPDVVSYSTVIHILCKIGRVE 430
Score = 39.7 bits (91), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 32/177 (18%), Positives = 69/177 (38%), Gaps = 6/177 (3%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
++GI P+ + ++ N C++G + A + + + +N LI G+
Sbjct: 476 NRGIHPDAIFMNTIMDN------LCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYC 529
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
M + M GL P + TY L+ GY K+G ++ + + F
Sbjct: 530 FVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAI 589
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + + + + +A + M G + +TY ++ G ++ +D R+
Sbjct: 590 TSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMF 646
>gi|413944087|gb|AFW76736.1| hypothetical protein ZEAMMB73_938811 [Zea mays]
Length = 496
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+L + IE +R+ QL+ N +I +C+ G ++ A I FMR + + LI
Sbjct: 241 ELFEEMIEKDRIVPDQLLYNV-IIDGFCRQGQVDKARAIFGFMRKNECEPNTFNYATLIN 299
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
GH + D+ +A + M +G+EP A +YT L+ +HG +D + +K +
Sbjct: 300 GHCKKADIEAARSVFEEMRNSGVEPDAVSYTALIGCLCRHGSVDEGIGLVLEMKEKGCRA 359
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
++ L + A G+L + G++ + +Y LM G+MD
Sbjct: 360 DVVTYNLVIEGLCKDGRTVEAMGLLESVPLEGVKLNVASYRILMNCLCSRGEMD 413
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 10/171 (5%)
Query: 115 EPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEG---VFNALIYGHSQ 171
PN Y L+ + Y ++G +E A K+L+ MR+ T + ++ LI G +
Sbjct: 179 RPNTCVYNILVKH------YVKNGELETAFKVLDEMREYTCADVKPNLVTYSTLIGGLCR 232
Query: 172 ANDMASA-EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
M A E M+ + + P Y ++ G+ + G +D + ++ F
Sbjct: 233 GGKMKEAFELFEEMIEKDRIVPDQLLYNVIIDGFCRQGQVDKARAIFGFMRKNECEPNTF 292
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
++ +D+ +A + M +G+EP A +YT L+ +HG +D
Sbjct: 293 NYATLINGHCKKADIEAARSVFEEMRNSGVEPDAVSYTALIGCLCRHGSVD 343
>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 484
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I Y+AL +V + + K+ S GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSXGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCN-----AEKMSEARS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M + P+ + + +L+ K G++D+ +L
Sbjct: 277 ILKEMVDKYIAPTDNSIFMRLISSQCKAGNLDAAADVL 314
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 111/278 (39%), Gaps = 24/278 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEG---IVQESVKLFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + + L I+ A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYDALFKVIMRRGRFMMAKRYFNKMLSXGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D I + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--ITYNTMINGYYRVKKMEEAEKYFVE----------MKGKNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPG 407
TYT L+ GY +D RL+ + + + + L + E + E S ++
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEM 281
Query: 408 V-GYSADAANHIY-HLINK----GQIDAAYRIVNTLAR 439
V Y A N I+ LI+ G +DAA ++ ++ R
Sbjct: 282 VDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKSMIR 319
Score = 42.7 bits (99), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 68/162 (41%), Gaps = 4/162 (2%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + ++AL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSXG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
AE M +EP+ TYT L+ GY +D RL+ +
Sbjct: 204 AEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLVEE 245
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 174/442 (39%), Gaps = 65/442 (14%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
G PN V Y +I YC+ G+++ AT++ E ++ K F + + ALI G +
Sbjct: 234 NGCVPNVVFYNVIIDG------YCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCK 287
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
A + +L M+ GL + + + ++ K+G +D ++ +E+
Sbjct: 288 AGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDK---AAEMMRMMTEMGCEPD 344
Query: 232 FQLTNLLILVSSD---MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
N+LI S + AE L + L P+ +YT LM Y K GD +L
Sbjct: 345 ITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLF 404
Query: 289 QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
+ + GD D++ +G +I V I + M + G+ P AQ
Sbjct: 405 KIAET---GDKPDLV------SYGAFI---HGSVAGGEIDVALMVREKMMEKGVFPDAQI 452
Query: 349 YTKLMCGYAKHGDMDSIRRLLAQ-----------NGSSLVNGDYLDIIHALAVSGHGEYI 397
Y LM G K G + + LL++ ++LV+G I + E
Sbjct: 453 YNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDG----FIRNNELDKATELF 508
Query: 398 DEIISK-IQPG-VGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGE---QLPVGG 452
+ ++SK I PG VGY+ I L G++ A VN + + + E + G
Sbjct: 509 EVVMSKGIDPGVVGYNV----MIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDG 564
Query: 453 FLVRH------------MVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSAN 500
++ +H M + +P V N + + + + +R + + N
Sbjct: 565 YVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPN 624
Query: 501 INGEQLPVGGFLVRHMVKTNQP 522
+ + +GGF KT +P
Sbjct: 625 VVTYTILIGGF-----SKTGKP 641
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 129/303 (42%), Gaps = 36/303 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E+ DI+ YN L+ +FL + + + + PN+ +Y + L+ YC
Sbjct: 338 EMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSY------TPLMHAYC 391
Query: 136 QDGNIEGATKILEFMR---DKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ G+ A+ +L + DK +S G F I+G ++ A + M + G+ P
Sbjct: 392 KQGDYVMASDMLFKIAETGDKPDLVSYGAF---IHGSVAGGEIDVALMVREKMMEKGVFP 448
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIP-----SLKPQSELFLCFSFQLTNLLILVSSDMAS 247
AQ Y LM G K G + K + +L+P + ++ L + I ++++
Sbjct: 449 DAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYA----TLVDGFIR-NNELDK 503
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSVRRLLAQSGSSLVNGDYLDIIHAL 306
A + ++ G++P Y ++ G K G M D+V + ++ +Y H+
Sbjct: 504 ATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEY---THST 560
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
+ G+ + D SA+ F G MM Q +P+ YT L+ G+ K DM
Sbjct: 561 VIDGYVKQHDLDSALKMF---------GQMMKQK-YKPNVVAYTSLINGFCKIADMSRAE 610
Query: 367 RLL 369
++
Sbjct: 611 KVF 613
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 110/276 (39%), Gaps = 20/276 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y L+ Y +D L K+ G +P+ V+Y I S G I+ A
Sbjct: 383 YTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGS------VAGGEIDVALM 436
Query: 146 ILEFMRDK-TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
+ E M +K FP ++ ++N L+ G + +A+ +L+ M L+P A Y L+ G+
Sbjct: 437 VREKMMEKGVFPDAQ-IYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGF 495
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
++ ++D + + + + + M A + M A P
Sbjct: 496 IRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDE 555
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF 324
T++ ++ GY K D+DS ++ Q + + + ++G + D A F
Sbjct: 556 YTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNV--VAYTSLINGFCKIADMSRAEKVF 613
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
M LEP+ TYT L+ G++K G
Sbjct: 614 ----------RAMQSFNLEPNVVTYTILIGGFSKTG 639
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 118/297 (39%), Gaps = 46/297 (15%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
G P +L++ D Y L+ ++ N T+ + S+GI+P V Y
Sbjct: 464 GRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGY 523
Query: 122 QQLI-----------------------------SNSKLISKYCQDGNIEGATKILEFMRD 152
+I ++S +I Y + +++ A K+ M
Sbjct: 524 NVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMK 583
Query: 153 KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 212
+ + + + +LI G + DM+ AE + M LEP+ TYT L+ G++K G +
Sbjct: 584 QKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEK 643
Query: 213 IKT-----KIPSLKPQSELFLCFSFQLTNL---LILVSSDMASAEGIL-----TMMSQAG 259
+ + + P F LTN+ +L+ + + ++ TM+S+ G
Sbjct: 644 AASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISE-G 702
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGE 313
TY ++ KHG +D+ + L + + G + + + ++H L +G +
Sbjct: 703 WSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSK 759
>gi|255660948|gb|ACU25643.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 484
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I Y+AL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNFMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G ++ A + E M+ + +N +I G+ + M E M +EP+
Sbjct: 162 LSGKVDTANRFFEXMKSREIMPDVITYNTMINGYYRVKKMEEXENYFMEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + +K P + + L N + M+ A+
Sbjct: 222 TYTTLIKGYVSVDRIDDALRLVEEMKGFGINPNAITYSTLLPGLCN-----AEKMSEAQS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M + P + + +L+ G K G++D+ +L
Sbjct: 277 ILKEMVDKYIAPKDNSIFLRLISGQCKVGNLDAAADVL 314
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 58/323 (17%), Positives = 125/323 (38%), Gaps = 24/323 (7%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G ++ + K+ + M + + ++AL + A+ M G
Sbjct: 86 MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+EP+ T+ ++ G+ G +D+ +K + + ++ M E
Sbjct: 146 IEPTRHTFNFMIWGFFLSGKVDTANRFFEXMKSREIMPDVITYNTMINGYYRVKKMEEXE 205
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
M +EP+ TYT L+ GY +D RL+ + +N + + L
Sbjct: 206 NYFMEMKGRNIEPTVVTYTTLIKGYVSVDRIDDALRLVEEMKGFGINPNAITYSTLLPGL 265
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IR 366
+ E + E +I+ M+ + + +L+ G K G++D+ +
Sbjct: 266 CNAEKMSEAQSIL-----------KEMVDKYIAPKDNSIFLRLISGQCKVGNLDAAADVL 314
Query: 367 RLLAQNGSSLVNGDYLDIIHALAVSGHGE----YIDEIISK---IQPGVGYSADAANH-- 417
+++ + G Y +I +G + ++D++I K ++P + + +
Sbjct: 315 KVMIRLSVPTEAGHYGVLIENCCKAGQYDRAVKFLDKVIEKDIILRPQSSLHMEPSAYNP 374
Query: 418 -IYHLINKGQIDAAYRIVNTLAR 439
I +L N GQ A +V L +
Sbjct: 375 LIEYLCNNGQTAKAETLVRQLMK 397
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 91/180 (50%), Gaps = 10/180 (5%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+ PN VT+ + LI +C++G ++ A +I + M ++ +N LIYG +
Sbjct: 235 KGLVPNGVTF------TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-IKTKIPSLKPQSEL-FLC 229
D+ A+ ++ M GL+P TYT L+ G K GD+++ + + +K L +
Sbjct: 289 KGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
++ ++ L S AE +L M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 349 YTALISGLCQEGRS--VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 129/305 (42%), Gaps = 43/305 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS ++ LM GY K GD++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
M GL+P TYT L+ G K GD+++ R+ + + L + Y
Sbjct: 302 ------------MIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 382 LDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
+I L G + + E++S ++P +G N KG + +++
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWTGSKLLKE 406
Query: 437 LARSA 441
+ R
Sbjct: 407 MQRDG 411
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 119/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 IMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ ++ + ++ ++ GI P+ VTY + LI +C+ NI+ A K
Sbjct: 392 YNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTY------TSLIDGFCKGNNIDLALK 445
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M+ K + + LI G + DM SA +L + AGL P+ Y ++ G+
Sbjct: 446 LLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFK 505
Query: 206 KHGDMDSIKTKIPSLKPQ-SELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEP 262
+M++++ I K +E C T+L+ +L S + A I T M G+ P
Sbjct: 506 ---NMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILP 562
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLL 287
+ +T L+ G G ++ R++L
Sbjct: 563 DDRAHTVLINGLCNKGQFENARKIL 587
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 139/347 (40%), Gaps = 56/347 (16%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+S C++G + A + + + K + +N +I GH + +++ +A + M G
Sbjct: 255 LLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNG 314
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELF------LC---FSFQLT 235
P+A T+T LM GY K GD+++ + K ++ P LC SF+
Sbjct: 315 FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGR 374
Query: 236 NLL---------------------ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+L + ++ A + M + G+ PS TYT L+ G+
Sbjct: 375 DLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGF 434
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGDYLDI-IHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
K ++D +LL G +DI + + G + D SA H L
Sbjct: 435 CKGNNIDLALKLLNDMKRK---GLKMDIKAYGTLIDGFCKRRDMKSA---------HELL 482
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAV 390
+ AGL P+ Y ++ G+ +++ + + + G Y +I L
Sbjct: 483 NELRG-AGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLK 541
Query: 391 SGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIV 434
SG Y +I +++ G D H I L NKGQ + A +I+
Sbjct: 542 SGRLLYASDIHTEMLSK-GILPDDRAHTVLINGLCNKGQFENARKIL 587
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P D+ Y +L+ L + +D ++ S+GI P+ + + LI+ C G
Sbjct: 525 IPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAH------TVLINGLCNKG 578
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
E A KILE M K S ++N LI GH + ++ A + M GL P TY
Sbjct: 579 QFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYD 638
Query: 199 KLMCGYAKHGD 209
L+ G K GD
Sbjct: 639 ILVNGKFK-GD 648
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 78/208 (37%), Gaps = 41/208 (19%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ +DI Y L+ + S + L +L G+ PNR Y +I+ K ++
Sbjct: 455 LKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMN------ 508
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+E A + + M ++ P + +LI G ++ + A I T M G+ P + +T
Sbjct: 509 NVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHT 568
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G G + +A IL M+
Sbjct: 569 VLINGLCNKGQFE-----------------------------------NARKILEDMNGK 593
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+ PS Y L+ G+ K G++ RL
Sbjct: 594 NMIPSVLIYNTLIAGHFKEGNLQEAFRL 621
Score = 46.2 bits (108), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 132/299 (44%), Gaps = 45/299 (15%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V LD Y+ + + ++ L ++ + G P T+ + +I+ ++G
Sbjct: 71 VELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTF------TSVITACVKEG 124
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A ++ + M + ++ V +L+ G+ ++ SA ++ +S++GL P+ TY+
Sbjct: 125 NVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYS 184
Query: 199 KLMCGYAKHGDMDS------------IKTKIPSLKPQSELFL-CFSFQLTNLLILVSSDM 245
L+ G K+G+++ I++ + SL E +L C S+Q N + + +
Sbjct: 185 VLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQ--NAFTMFNDAL 242
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHA 305
++GL + T+ L+ K G M+ L + + ++ + + +
Sbjct: 243 -----------ESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVS--YN 288
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
+ GH D ++A C + E M G P+A T+T LM GY K GD+++
Sbjct: 289 NIILGHCRK-DNINA------ACKVYKE---MLDNGFTPNAVTFTILMDGYFKKGDIEN 337
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 118/292 (40%), Gaps = 26/292 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN ++ + + L+ L+S G +P+ VT+ L+ + ++ E
Sbjct: 530 DIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRW------E 583
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +++ M P E FN +I Q + A L +M++ G P++ TY+ ++
Sbjct: 584 DAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVV 643
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
K G + + + + + ++ ++NL + M A +L +M GL
Sbjct: 644 DALLKAGKAQAALELLSGMTNGTPDLITYNTVISNL--TKAGKMEEALDLLRVMVSNGLC 701
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEV 318
P TY L G + D R+L + + ++ D Y D++ +
Sbjct: 702 PDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDL---- 757
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
AI CF + M +G P TY L+ A G +D +RLLA
Sbjct: 758 -AIDCFAH----------MVSSGCMPDESTYVILLEALAYGGLLDEAKRLLA 798
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 130/329 (39%), Gaps = 32/329 (9%)
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
+++ + +++ YC+ G IE A +++ M FP FN LI + A +
Sbjct: 219 VVTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALAVFD 275
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
M G PS TY+ L+ K + ++ + ++ + +
Sbjct: 276 DMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEG 335
Query: 244 DMASAEGILTMMSQAGLEPSAQTYT---KLMCGYAKHGDMDSVRRLLAQSGSSLVNGD-- 298
D+ A IL+ + G +P A TYT K +CG + + V LLA+ S+ D
Sbjct: 336 DVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKE---VEELLAEMTSNNCAPDEV 392
Query: 299 -YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
+ I+ +L G +D +V MS+ G TY+ ++ G
Sbjct: 393 TFNTIVTSLCQQG---LVDRAIEVV------------DHMSEHGCVADIVTYSSILDGLC 437
Query: 358 KHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADA 414
G +D LL++ S D Y ++ L + E +E+++++ +
Sbjct: 438 DVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEV 497
Query: 415 ANH--IYHLINKGQIDAAYRIVNTLARSA 441
+ + L KG +D A R+V ++ +
Sbjct: 498 TFNTVVASLCQKGLVDRAIRVVEQMSENG 526
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 127/335 (37%), Gaps = 33/335 (9%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P D +N L+R + +G P+ VTY S L+ C++
Sbjct: 248 PPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTY------SILLDATCKESG 301
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT- 198
A +L+ MR K +N LI D+ A IL+ + G +P A TYT
Sbjct: 302 YRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTP 361
Query: 199 --KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
K +CG + +++ + ++ S + F+ +T+L D A ++ MS
Sbjct: 362 VLKSLCGSERWKEVEELLAEMTSNNCAPDEVT-FNTIVTSLCQQGLVDRAIE--VVDHMS 418
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE 313
+ G TY+ ++ G G +D LL++ S D Y ++ L + E
Sbjct: 419 EHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWE 478
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ-- 371
+E+ A M + P T+ ++ + G +D R++ Q
Sbjct: 479 RAEELMA---------------EMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMS 523
Query: 372 -NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
NG S Y II L + E++S +Q
Sbjct: 524 ENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQ 558
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 62/325 (19%), Positives = 122/325 (37%), Gaps = 37/325 (11%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H E DI Y+++L D + L++L+S G +P+ + Y + ++
Sbjct: 416 HMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAY------TTVLK 469
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
C E A +++ M P E FN ++ Q + A ++ MS+ G P
Sbjct: 470 GLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSP 529
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMAS 247
TY ++ G +D + L KP + F+ L L +
Sbjct: 530 DIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPD---IVTFNTLLKGLCGV--DRWED 584
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIH 304
AE ++ M ++ P T+ ++ + G + +++A++G + Y ++
Sbjct: 585 AEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVD 644
Query: 305 ALAVSGHGEYIDEVSA--------IVCFVNICFHWLEGPMMSQA----------GLEPSA 346
AL +G + E+ + ++ + + + + M +A GL P
Sbjct: 645 ALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDT 704
Query: 347 QTYTKLMCGYAKHGDMDSIRRLLAQ 371
TY L G + D R+L +
Sbjct: 705 TTYRSLAYGVCREDGTDRAVRMLRR 729
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ ++ +G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ ++ M GL P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K GD+++ + + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLNVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +LL +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 127/306 (41%), Gaps = 57/306 (18%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ L PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQVSGVQPDVY-TYSVLINGL--CKESKMDDANXLFDEMLDKGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI----RRLLAQNGSSLVNGD 380
M GL P TYT L+ G K GD+++ +R++ +N + D
Sbjct: 302 ------------MIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN----IRLD 345
Query: 381 YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG---QIDAAYRIVNTL 437
D+ + +SG + G S DA + ++N G +I I+N
Sbjct: 346 --DVAYTALISGLCQE------------GRSVDAEKMLREMLNVGLKPEIGTYTMIINEF 391
Query: 438 ARSANI 443
+ ++
Sbjct: 392 CKKGDV 397
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 120/299 (40%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + + P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
GL P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 IMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + +N+ GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKMLREMLNV-------------GLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 141/337 (41%), Gaps = 55/337 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D S Y+ ++ + + + +++S + P+ TY + LI +C+ G ++
Sbjct: 479 DTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTY------TILIDSFCKVGLLQ 532
Query: 142 GATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A K E +RD P + + ALI+ + +A M+SA + MM G P+ TYT L
Sbjct: 533 QARKWFDEMVRDGCAP-NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTAL 591
Query: 201 MCGYAKHGDMDSIKTKIPSLK-----PQSELFL-----------CFSFQLTNLLILVSSD 244
+ G+ K G ++ ++ P +++ F++ + +
Sbjct: 592 IDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHK 651
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSS 293
+ A +L +MS G EP+ Y L+ G+ K G +D + + + + SS
Sbjct: 652 VKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSS 711
Query: 294 LVNGDYLDIIHALAVSGHGEYIDEVSA--IVCFVNICFHWLEG--------------PMM 337
L++ + D LA+ ++ A ++ + + ++G MM
Sbjct: 712 LIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEM----IDGLCKVGKTDEAYRLMSMM 767
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGS 374
+ G P+ TYT ++ G+ K G +D L+ Q G+
Sbjct: 768 EEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA 804
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 173/448 (38%), Gaps = 96/448 (21%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y AL+ YL S + + S+G PN VTY + LI +C+ G IE
Sbjct: 549 NVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTY------TALIDGHCKSGQIE 602
Query: 142 GATKILEFMR--------DKTFPISEG--------------------------------- 160
A +I MR D F I +G
Sbjct: 603 KACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVM 662
Query: 161 ----------VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210
V++ALI G + + A+ + T MS+ G P+ TY+ L+ K +
Sbjct: 663 SVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRL 722
Query: 211 DSIKTKIPSLKPQSEL---FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTY 267
D + K+ S ++ + ++ + L + +D A +++MM + G P+ TY
Sbjct: 723 D-LALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTD--EAYRLMSMMEEKGCHPNVVTY 779
Query: 268 TKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYIDEVSAIVCF 324
T ++ G+ K G +D L+ Q G+ +++ +I+ +G +D+ ++
Sbjct: 780 TAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG---LLDDAHQLL-- 834
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH-----GDMDSIRRLLAQNGSSLVNG 379
M Q Y K++ G+ + G +D I A+N + +
Sbjct: 835 ----------DEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEI----AENVAVPIIP 880
Query: 380 DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINK----GQIDAAYRIVN 435
Y +I + +G E E+ + YSA + LI ++D A+ +
Sbjct: 881 AYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYA 940
Query: 436 TLARSANINGEQLPVGGFLVRHMVKTNQ 463
+ + I +L + +LV+ +++ N+
Sbjct: 941 DMIKRGGI--PELSIFFYLVKGLIRINR 966
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 119/330 (36%), Gaps = 70/330 (21%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
LA +E + + + V Y Q+IS C+ E A L MR + + + L
Sbjct: 287 LALIEKEEFKLDTVIYTQMISG------LCEASLFEEAMDFLSRMRSSSCIPNVVTYRIL 340
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI------------ 213
+ G + + + IL+MM G PS + + L+ Y + GD
Sbjct: 341 LCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGC 400
Query: 214 ----------------KTKIPSL-------KPQSELF----LCFSFQLTNL--LILVSSD 244
K+PSL K E+ + ++NL + +
Sbjct: 401 QPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGK 460
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLD 301
A I+ M G P TY+K++ +D+ L + S+ V D Y
Sbjct: 461 FEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTI 520
Query: 302 IIHALAVSG----HGEYIDEVSAIVCFVNICFH------WLEGPMMSQA----------G 341
+I + G ++ DE+ C N+ + +L+ MS A G
Sbjct: 521 LIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEG 580
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
P+ TYT L+ G+ K G ++ ++ A+
Sbjct: 581 CIPNVVTYTALIDGHCKSGQIEKACQIYAR 610
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 122/301 (40%), Gaps = 35/301 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P ++ YN ++ + + + ++ + G+ P+ VTY S L+ C
Sbjct: 332 EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTY------SALVDGLC 385
Query: 136 QDGNIEGATKILEFM-RDKTFPIS---EGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
+ G ++ A +LE M ++ FP S + NAL S+A + A L M G
Sbjct: 386 KLGKLDRACDLLEEMSKEGVFPDSFTDASILNAL----SKAGKVDYALSHLETMKARGST 441
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
P TY L+ G K G +D T + + FS+ + + S A A I
Sbjct: 442 PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAI 501
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG- 310
M + G+ P Y L+ G A++G D LL +SL D+ ++H + V G
Sbjct: 502 FQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK---TSLCKPDF--VMHKMVVDGL 556
Query: 311 --HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
G+ D + M+ AG A TY ++ G K G +D R+L
Sbjct: 557 CKAGKAEDACEVV-------------ERMADAGFPADAFTYINVVRGLRKLGKVDKARQL 603
Query: 369 L 369
+
Sbjct: 604 V 604
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 153/419 (36%), Gaps = 86/419 (20%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI-----------SN 127
VP D+ Y + + D K+ ++G + + V + +I +
Sbjct: 211 VP-DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG------------------- 168
+++I C+ G ++ A K E M + P S +FN LI+
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329
Query: 169 -------------------HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 209
+A + A+ ++ M+ GL P TY+ L+ G K G
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Query: 210 MDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS----AEGILTMMSQAGLEPSAQ 265
+D + + + F T+ IL + A A L M G P
Sbjct: 390 LDRACDLLEEMSKEG----VFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLV 445
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIV 322
TY L+ G K G +D LA+ ++ D Y II AL SG A
Sbjct: 446 TYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQA-----AGAHA 500
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL 382
F M + G+ P Y L+ G A++G D LL +SL D++
Sbjct: 501 IFQE----------MVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK---TSLCKPDFV 547
Query: 383 ---DIIHALAVSGHGEYIDEIISKIQPGVGYSADA---ANHIYHLINKGQIDAAYRIVN 435
++ L +G E E++ ++ G+ ADA N + L G++D A ++V+
Sbjct: 548 MHKMVVDGLCKAGKAEDACEVVERMADA-GFPADAFTYINVVRGLRKLGKVDKARQLVD 605
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P D Y+ +LR + L +L G++ N +TY S +I C+
Sbjct: 70 PPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITY------SVVIDGCCKASR 123
Query: 140 IEGATKILEFMRDKTFPISEGV-FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A +I + M + + V FN+L+ G M+ A + M++AG EP+ +Y+
Sbjct: 124 VDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYS 183
Query: 199 KLMCGYAKHGDMD 211
L+ G K G +D
Sbjct: 184 TLLDGLCKAGRLD 196
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 87/424 (20%), Positives = 164/424 (38%), Gaps = 31/424 (7%)
Query: 138 GNIEGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G I ++ +++ R K + S +N + ++AN A M + G P T
Sbjct: 16 GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL-TMM 255
Y+ ++ G K G++D K + L+ ++ + +S + A I TM
Sbjct: 76 YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHG 312
+ G P T+ L+ G M L +A++G Y ++ L +G
Sbjct: 136 AGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGR- 194
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM----DSIRRL 368
+DE C W E M + P YT + G K + D R++
Sbjct: 195 --LDEA---------CRLWEE---MVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKM 240
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQID 428
+ + GS + +I L GH E + + G +A +I++
Sbjct: 241 VTK-GSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPP 299
Query: 429 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAAN-HIYHLINKGQIDA 487
+A + NTL A ++LP G L + M + + + N + +L Q+D
Sbjct: 300 SA-ELFNTLIH-AVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDE 357
Query: 488 AYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAV 547
A +VN +A + ++ + + LV + K + +D+ + ++ E + P +F A
Sbjct: 358 AQELVNEMA-NYGLSPDVVTYSA-LVDGLCKLGK-LDRACDLLEEMSKEGVFPDSFTDAS 414
Query: 548 LIKA 551
++ A
Sbjct: 415 ILNA 418
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 113/286 (39%), Gaps = 21/286 (7%)
Query: 82 DISHYNALLRVYLDNE---HTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
++ YN L+ Y + F+ ++ + I PN VT+ LI +C+D
Sbjct: 234 NVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDG------FCKDE 287
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A K E M+ + + +N+LI G + A + M GL+P+ TY
Sbjct: 288 NVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYN 347
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G+ K M + Q + +F M + + M
Sbjct: 348 ALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDE 407
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
G+ P+ TY L+ G + D+ + + LL + + + GD + + + + G + D+
Sbjct: 408 GILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDV--VTYNILIDGLCKN-DKS 464
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
+N F+ GL+P+ TY LM GY G + +
Sbjct: 465 RNAEKLLNEMFNL---------GLKPNHVTYNTLMDGYCMEGKLKA 501
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 19/195 (9%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP ++ +N ++ Y + + +GI PN TY LI+ C+
Sbjct: 375 VP-NVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAG------LCRKQ 427
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+++ A ++L M +K +N LI G + + +AE +L M GL+P+ TY
Sbjct: 428 DLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYN 487
Query: 199 KLMCGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGIL 252
LM GY G + + ++T++ + Q + N+LI + + +A G+L
Sbjct: 488 TLMDGYCMEGKLKAALNVRTRMEKERKQPNVV------TYNVLIKGYCKINKLEAANGLL 541
Query: 253 TMMSQAGLEPSAQTY 267
M + GL P+ TY
Sbjct: 542 NEMLEKGLNPNRTTY 556
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 12/211 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YNAL+ + + T + Q + PN +T+ +I YC++G +E
Sbjct: 342 NIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMID------AYCKEGMME 395
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ M D+ + +N LI G + D+ +A+ +L M GL+ TY L+
Sbjct: 396 EGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILI 455
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQA 258
G K+ D + L L L + N L+ + + +A + T M +
Sbjct: 456 DGLCKN---DKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKE 512
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+P+ TY L+ GY K +++ LL +
Sbjct: 513 RKQPNVVTYNVLIKGYCKINKLEAANGLLNE 543
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 113/287 (39%), Gaps = 34/287 (11%)
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
L S + L+S ++ I + + M + + FN I G +A + AE +
Sbjct: 165 LTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIE 224
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---L 240
M G+ P+ TY L+ GY K G + +K +C + N LI
Sbjct: 225 DMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFC 284
Query: 241 VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ----------- 289
++A+A+ M + GL+P+ TY L+ G +G ++ L +
Sbjct: 285 KDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIV 344
Query: 290 SGSSLVNGDYLDIIHALAVSGHGEYIDEVSA------IVCFVNICFHWLEGPMMSQA--- 340
+ ++L+NG + + D+VS ++ F + + + MM +
Sbjct: 345 TYNALING----FCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSL 400
Query: 341 -------GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD 380
G+ P+ TY L+ G + D+ + + LL + + + GD
Sbjct: 401 CSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGD 447
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 162/396 (40%), Gaps = 50/396 (12%)
Query: 83 ISHYNALLRVYLDNEHTFSPT-DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
I YN +L VY + + +A ++ G+ P+R TY LIS + + Y +
Sbjct: 189 IVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKE----- 243
Query: 142 GATKILEFMRDKTFPISEGVFNAL--IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
A ++ + M+ F + FN+L +YG ++ +D A ++ M + G PS TY
Sbjct: 244 -AAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHD--EAIEVIQEMERVGCPPSVVTYNS 300
Query: 200 LMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
L+ Y K G ++ + ++ +KP + ++ ++ L D A E
Sbjct: 301 LISSYVKDGLLEQAVALKQEMEVKGMKPD---VVTYTTLISGLDRAGKIDAAIVE--YDE 355
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
M + G +P+ TY L+ + G + + + S+ D + LAV G
Sbjct: 356 MVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGL 415
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQ 371
EVS + M +AG P TY L+ Y++ G D I + + +
Sbjct: 416 DSEVSGVF------------KEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMME 463
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ-----PGVGYSADAANHIYHLINKGQ 426
G Y ++ ALA G E +++ ++++ P YS + H Y
Sbjct: 464 AGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD-EYSYSSLLHAYA------ 516
Query: 427 IDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTN 462
A R+ A S +I E++ +LV+ +V N
Sbjct: 517 --NAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVN 550
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 133/339 (39%), Gaps = 64/339 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI +N LL V+ N + +++ G P R TY LIS+ Y + G +
Sbjct: 399 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISS------YSRCGLFD 452
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M + +NA++ ++ AE + M + +P +Y+ L+
Sbjct: 453 LAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 512
Query: 202 CGYAKHGDMDSIK-------------------------TKIPSLKPQSELFLCFSFQLTN 236
YA +D +K +K+ +L + FL + +
Sbjct: 513 HAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCS 572
Query: 237 LLILVSSDMAS----------AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
L I V + M S E IL++M ++ + SA TY LM Y++ GD + +
Sbjct: 573 LDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENI 632
Query: 287 LAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSA----------IVCFVNICFHWLE 333
L + SS V D Y +I+A G + + + +V + ++
Sbjct: 633 LTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVS 692
Query: 334 GPMMSQA----------GLEPSAQTYTKLMCGYAKHGDM 362
M +A G +P+ +TY ++ GY ++G +
Sbjct: 693 NSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKL 731
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++S Y ++ + KIL M++ +S +N+L++ +S+ D E ILT + +G
Sbjct: 581 MVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSG 640
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
+ P +Y ++ Y + G M + K LKP + F + VS+
Sbjct: 641 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIF------VKSYVSNS 694
Query: 245 M--ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
M + E + M++Q G +P+ +TY ++ GY ++G + +
Sbjct: 695 MFEEAIELVRYMVTQ-GCKPNERTYNSIVEGYCRNGKLTDAK 735
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 157/398 (39%), Gaps = 58/398 (14%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P + YN+L+ Y+ + ++E +G++P+ VTY LIS + G
Sbjct: 292 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLD------RAGK 345
Query: 140 IEGA-TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
I+ A + E +R+ P + +NALI H + AG P T+
Sbjct: 346 IDAAIVEYDEMVRNGCKP-NLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWN 404
Query: 199 KLMCGYAKHGDMDSIKTKIPSLK-----PQSELFLCF--SFQLTNLLILVSSDMASAEGI 251
L+ + ++G + +K P+ + ++ S+ L L A I
Sbjct: 405 TLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDL-------AMQI 457
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSSLV----N 296
M +AG+ P TY ++ A+ G + +L A+ S SSL+ N
Sbjct: 458 YKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYAN 517
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIV---CFVNICFH--------WLEGPMMSQAGLEPS 345
LD + AL+ + E I+ + +V VN + +LE + Q
Sbjct: 518 AKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLE---LRQKRCSLD 574
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN---GDYLDIIHALAVSGHGEYIDEIIS 402
++ Y K+ + + ++L+ S +N Y ++H + G E + I++
Sbjct: 575 INVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILT 634
Query: 403 KIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
+I+ G D ++ IY KGQ+ A R+ + +
Sbjct: 635 EIKSS-GVRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 671
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 9/150 (6%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + L + YN+L+ +Y + L +++S G+ P+R +Y + +I Y
Sbjct: 603 ESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSY------NTVIYAYG 656
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G ++ A+++ M+ +N + + + A ++ M G +P+ +
Sbjct: 657 RKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNER 716
Query: 196 TYTKLMCGYAKHGDMDSIK---TKIPSLKP 222
TY ++ GY ++G + K + +P L P
Sbjct: 717 TYNSIVEGYCRNGKLTDAKIFVSNLPQLHP 746
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 148/360 (41%), Gaps = 60/360 (16%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNA++ L + + A++ + G+ P+ +TY L++ YC+ GN++ A
Sbjct: 313 YNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNG------YCKAGNLKEALL 366
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM---- 201
+ +R + +N I G+ + D+ A + M + G P+ TYT LM
Sbjct: 367 LFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSL 426
Query: 202 --CGYAKHGD-MDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
C A + D + +K L+P CF++ L+ D+A A + ++
Sbjct: 427 NVCSLAMAREFFDEMLSK--GLQPD-----CFAYNTRICAELILGDIARALELREVLMLE 479
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
G+ TY L+ G K G++ + L + S+ + D Y +IHA G +
Sbjct: 480 GISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERG---LL 536
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS----IRRLLAQ 371
E I F N M GL PSA T+T ++ Y + G++ S R++L +
Sbjct: 537 REARKI--FNN----------MISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKML-E 583
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAY 431
G Y +IHAL G + A++H + ++ +G + Y
Sbjct: 584 EGVEPNEITYNVLIHALCRMGRTQL-----------------ASHHFHEMLERGLVANKY 626
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 126/337 (37%), Gaps = 68/337 (20%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
GE ++ Y L++ L+ +F ++ S+G++P+ Y I ++
Sbjct: 407 GEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELIL--- 463
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
G+I A ++ E + + +N LI+G + ++ A+ + M GL+P
Sbjct: 464 ---GDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDC 520
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TYT L+ + + G + A I
Sbjct: 521 ITYTCLIHAHCERGLLRE-----------------------------------ARKIFNN 545
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVR---RLLAQSGSSLVNGDYLDIIHALAVSGH 311
M GL PSA T+T ++ Y + G++ S R + + G Y +IHAL G
Sbjct: 546 MISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGR 605
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ H+ E M + GL + TYT L+ G K G+ + R +
Sbjct: 606 TQLASH------------HFHE---MLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFE 650
Query: 372 NGSSLVNGDYLDIIHALAVSGHG-------EYIDEII 401
+ ++ DYL H V G EY+D +I
Sbjct: 651 MHQNGIHPDYL--THKALVKGFDGHVHHTIEYLDIVI 685
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 80/394 (20%), Positives = 153/394 (38%), Gaps = 53/394 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL----------------- 124
D+ N +LR D ++ GIEP+ VTY L
Sbjct: 168 DVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLL 227
Query: 125 --------------ISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
++ + +I+ + G++E A +++E MR + S +N LI G
Sbjct: 228 KEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASSFTYNPLITGLL 286
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+ + M G+ P+ TY ++ G + G +++ + K ++ L
Sbjct: 287 ARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVI 346
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
++ + ++ A + + +AGL P+ TY + GY + GD++ R L +
Sbjct: 347 TYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEM 406
Query: 291 GSSLVNGDYLDII-HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY 349
G G ++ + + + G S VC + + + + M+S+ GL+P Y
Sbjct: 407 GE---QGCLPNVCTYTILMKG--------SLNVCSLAMAREFFD-EMLSK-GLQPDCFAY 453
Query: 350 TKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQP 406
+C GD+ +R +L G S Y +IH L +G+ + E+ K+
Sbjct: 454 NTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS 513
Query: 407 GVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
G D + I+ +G + A +I N +
Sbjct: 514 N-GLQPDCITYTCLIHAHCERGLLREARKIFNNM 546
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 116/303 (38%), Gaps = 71/303 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y ALL YL + +D ++ G PN +TY S L+ C+ G + A +
Sbjct: 528 YTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITY------SALVDGLCKAGESQKACE 581
Query: 146 I--------------LEFMRDKTFPISEGV--FNALIYGHSQANDMASAEGILTMMSQAG 189
+ F + T I+ V + ALI G +A+ + A+ +L +MS G
Sbjct: 582 VYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNG 641
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
EP+ Y L+ G+ K G +D +A+
Sbjct: 642 CEPNHIIYDALIDGFCKVGKLD-----------------------------------NAQ 666
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+ MS+ G P+ TYT L+ K +D ++L+Q S + + + +
Sbjct: 667 EVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNV--VTYTAMID 724
Query: 310 GHGEYIDEVSAIVCFVNICFHWLE-GPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
G +C + C L+ MM + G P+ TYT L+ G K G +D +L
Sbjct: 725 G-----------LCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQL 773
Query: 369 LAQ 371
Q
Sbjct: 774 FTQ 776
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 60/159 (37%), Gaps = 29/159 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-------------- 127
++ Y AL+ + L + S G EPN + Y LI
Sbjct: 610 NVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVF 669
Query: 128 ---------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
+ LI +D ++ A K+L M + + + + A+I G +
Sbjct: 670 FRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRI 729
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 211
+ A +L+MM + G P+ TYT L+ G K G +D
Sbjct: 730 GECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVD 768
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 130/328 (39%), Gaps = 65/328 (19%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
L + + + Y+ L+R Y + + ++ S+G P VTY ++ C
Sbjct: 265 RLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYG------LC 318
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G + A K+L+ M +K +N LIYG+++ ++ A + + L PS
Sbjct: 319 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVV 378
Query: 196 TYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLCFSF-----QLTNLLI-------- 239
TY L+ G + GD+D +K ++ P ++F +F ++ NL +
Sbjct: 379 TYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEM 438
Query: 240 -------------------LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
L D + A G+ M G P TY + G K G++
Sbjct: 439 LNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNL 498
Query: 281 DSVRRLLAQSGSSLVNG------DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
L+ + L NG Y IIHA ++GH + + A+ +LE
Sbjct: 499 KEASELVKK---MLYNGLVPDHVTYTSIIHAHLMAGH---LRKARAL---------FLE- 542
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
M G+ PS TYT L+ YA G +
Sbjct: 543 --MLSKGIFPSVVTYTVLIHSYAVRGRL 568
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 117/290 (40%), Gaps = 58/290 (20%)
Query: 82 DISHYNALLRVYLDNEHTFS-PTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ + N +LR+ D ++ + + GI P VTY ++ + +C+ G +
Sbjct: 165 DVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDS------FCKKGMV 218
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A ++L M+ ++ +N L+ G S + +M A+ ++ M + GLE S TY L
Sbjct: 219 QEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPL 278
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ GY + G ++ AS G M G
Sbjct: 279 IRGYCEKGQIEE---------------------------------ASRLG--EEMLSRGA 303
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL-DII-HALAVSGHGEYIDEV 318
P+ TY +M G K G + R+LL +VN + + D++ + + G+ +
Sbjct: 304 VPTVVTYNTIMYGLCKWGRVSDARKLL----DVMVNKNLMPDLVSYNTLIYGYTRLGNIG 359
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
A + F + + L PS TY L+ G + GD+D RL
Sbjct: 360 EAFLLFAELRYR----------SLAPSVVTYNTLIDGLCRLGDLDVAMRL 399
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 10/118 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +++ +L H ++ S+GI P+ VTY + LI Y G ++ A
Sbjct: 520 YTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTY------TVLIHSYAVRGRLKLA-- 571
Query: 146 ILEF--MRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
IL F M +K + +NALI G + M A M G+ P+ TYT L+
Sbjct: 572 ILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILI 629
>gi|356540375|ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/357 (20%), Positives = 129/357 (36%), Gaps = 93/357 (26%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YNA++ VY + +LES+G P+ VTY + L+ + ++GN E
Sbjct: 355 DLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTY------NSLLYAFSREGNTE 408
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
I E M + F E +N +I+ + + A I M +G P A TYT L+
Sbjct: 409 KVRDICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLI 468
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
K +S + A +++ M AG++
Sbjct: 469 DSLGK-----------------------------------ASKVEEAANVMSEMLDAGVK 493
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P+ TY+ L+C YAK G +
Sbjct: 494 PTLHTYSALICAYAKAGKREEAE----------------------------------ETF 519
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVN 378
C M ++G++P Y+ ++ + + +M L + + G + N
Sbjct: 520 NC-------------MRRSGIKPDRLAYSVMLDFFLRFNEMKKAMGLYHEMIREGFTPDN 566
Query: 379 GDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVN 435
G Y ++HAL + +D II ++ G + + + L+ G D A +++
Sbjct: 567 GLYEVMMHALVRENMWDVVDRIIRDMEELSGMNPQVISSV--LVKGGCYDHAAKMLK 621
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 6/187 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L+ +Y + + K+ S G+EP TY+ LI+ + + E
Sbjct: 983 DEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLIT------AFNKQRMYE 1036
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ E +R + + ++ ++ + + D AE +L +M ++G+EP+ T LM
Sbjct: 1037 QAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTISTMHLLM 1096
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
Y K G + + + +L+ + + L D + LT M +AG+E
Sbjct: 1097 VSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTEMKEAGIE 1156
Query: 262 PSAQTYT 268
P + +T
Sbjct: 1157 PDHRIWT 1163
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 104/275 (37%), Gaps = 35/275 (12%)
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
+ + Q GN+ KI M+ + + V+ ++ + + E +L M +AG
Sbjct: 886 LEAFAQAGNLFEVQKIYNGMKAAGYFPTMHVYRIMLRLLCKCKRVRDVETMLCEMEEAGF 945
Query: 191 EPSAQ---TYTKLMCGYAKHGDMDSIKTKI--PSLKPQSELFLCFSFQLTNLLILVSSDM 245
+P Q + KL G M I KI SLKP E + L+I+ D
Sbjct: 946 QPDLQICNSILKLYLGIEDFKSMGIIYQKIQDASLKPDEETY-------NTLIIMYCRDR 998
Query: 246 ASAEG--ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYL 300
EG ++ M GLEP TY L+ + K + L L +G L Y
Sbjct: 999 RPEEGFSLMNKMRSLGLEPKLDTYRSLITAFNKQRMYEQAEELFEELRSNGYKLDRAFYH 1058
Query: 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
++ SG + + AI M ++G+EP+ T LM Y K G
Sbjct: 1059 LMMKTYRTSGDHRKAENLLAI---------------MKESGIEPTISTMHLLMVSYGKSG 1103
Query: 361 ---DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSG 392
+ +++ + L G L Y +I A G
Sbjct: 1104 QPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKG 1138
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 91/256 (35%), Gaps = 53/256 (20%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ GI P+ +TY LIS ++ N+E A + M +NA
Sbjct: 308 LLNEVRRSGIRPDIITYNTLISACS------RESNLEEAVAVFSDMESHRCQPDLWTYNA 361
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+I + + AE + + G P A TY L+ +++ G+ + ++
Sbjct: 362 MISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVR---------- 411
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
I M + G TY ++ Y K G D
Sbjct: 412 -------------------------DICEEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAM 446
Query: 285 RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
++ SS N D + + G ++E + ++ M AG++P
Sbjct: 447 QIYRDMKSSGRNPDAVTYTVLIDSLGKASKVEEAANVMS------------EMLDAGVKP 494
Query: 345 SAQTYTKLMCGYAKHG 360
+ TY+ L+C YAK G
Sbjct: 495 TLHTYSALICAYAKAG 510
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 105/269 (39%), Gaps = 26/269 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +LR+ + L ++E G +P+ I NS ++ Y + +
Sbjct: 917 YRIMLRLLCKCKRVRDVETMLCEMEEAGFQPD-----LQICNS-ILKLYLGIEDFKSMGI 970
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I + ++D + E +N LI + + ++ M GLEP TY L+ +
Sbjct: 971 IYQKIQDASLKPDEETYNTLIIMYCRDRRPEEGFSLMNKMRSLGLEPKLDTYRSLITAFN 1030
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K + + L+ + L S D AE +L +M ++G+EP+
Sbjct: 1031 KQRMYEQAEELFEELRSNGYKLDRAFYHLMMKTYRTSGDHRKAENLLAIMKESGIEPTIS 1090
Query: 266 TYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY-IDEVSAI 321
T LM Y K G + ++V + L +G L Y +I A G + I++++
Sbjct: 1091 TMHLLMVSYGKSGQPEEAENVLKNLRTTGVVLDTLPYSSVIDAYLKKGDFKAGIEKLTE- 1149
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYT 350
M +AG+EP + +T
Sbjct: 1150 ---------------MKEAGIEPDHRIWT 1163
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 70/365 (19%), Positives = 142/365 (38%), Gaps = 44/365 (12%)
Query: 103 TDFLAKLESQG-----IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPI 157
TD + L+S+ +E RV Q ++ + K+ N + A ++ E + + +
Sbjct: 155 TDTILALKSEEFVAGVLEERRV--QMTPTDFCFVVKWVGQQNWQRALELYECLNLRHWYA 212
Query: 158 SEGVFNALIYG-HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTK 216
A I G +AN A A I +++ + + Q Y +M YA++G +K
Sbjct: 213 PNARMVATILGVLGKANQEALAVEIFAR-AESSVGDTVQVYNAMMGVYARNGRFSKVKEL 271
Query: 217 IPSLKPQSELFLCFSFQLTNLLILVSSDMAS-------AEGILTMMSQAGLEPSAQTYTK 269
+ ++ + C L + L+++ M S A +L + ++G+ P TY
Sbjct: 272 LDLMRERG----CVP-DLVSFNTLINARMKSGAMEPNLALQLLNEVRRSGIRPDIITYNT 326
Query: 270 LMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICF 329
L+ ++ +++ + + S D ++V G + + F
Sbjct: 327 LISACSRESNLEEAVAVFSDMESHRCQPDLWTYNAMISVYGRCARARKAEEL-------F 379
Query: 330 HWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIH 386
LE G P A TY L+ +++ G+ + +R + + + G Y IIH
Sbjct: 380 KELES-----KGFFPDAVTYNSLLYAFSREGNTEKVRDICEEMVKRGFGQDEMTYNTIIH 434
Query: 387 ALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGE 446
G + +I ++ G + DA + + + G+ + + +AN+ E
Sbjct: 435 MYGKQGRHDQAMQIYRDMKSS-GRNPDAVTYTVLIDSLGK-------ASKVEEAANVMSE 486
Query: 447 QLPVG 451
L G
Sbjct: 487 MLDAG 491
>gi|428671933|gb|EKX72848.1| pentatricopeptide repeat domain containing protein [Babesia equi]
Length = 1104
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 117/298 (39%), Gaps = 62/298 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQG-IEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
Y + Y++N ++SQG ++PN + Y + LI Y Q+ ++ A
Sbjct: 771 YGCMFDAYVNNNRVDDAVRLFEDMKSQGKVKPNTIMY------TTLIKGYGQNKQLDKAL 824
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
K+ M + + +N++I ++ DM A +L M +EP T++ ++ GY
Sbjct: 825 KMFNMMCSENVAANTVTYNSIIDACARVGDMNGAASLLEDMLNNNIEPDLITFSTIIKGY 884
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL---------ILVSSDMAS-------- 247
+MD SFQL +++ IL +S +
Sbjct: 885 CVQSNMDK------------------SFQLLSIMYERGIMPDVILYNSLLEGCVKSGLLW 926
Query: 248 -AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL----AQSGSSLVNGDYLDI 302
E + M Q G+ PS T T L+ Y ++G +D V L Q G ++ Y +
Sbjct: 927 LCEKLWQQMQQYGIPPSNFTLTILIKMYGRNGQLDKVFELADTLPKQYGFTINTHVYTCL 986
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+ A +G I EV M AG++ A+T+ L+ G +K G
Sbjct: 987 MSACITNGRYSMILEVY---------------KCMKSAGIKADAKTFETLIQGASKGG 1029
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 26/226 (11%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L + + IEP+ +T+ S +I YC N++ + ++L M ++ ++N+L
Sbjct: 862 LEDMLNNNIEPDLITF------STIIKGYCVQSNMDKSFQLLSIMYERGIMPDVILYNSL 915
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
+ G ++ + E + M Q G+ PS T T L+ Y ++G +D + +L Q
Sbjct: 916 LEGCVKSGLLWLCEKLWQQMQQYGIPPSNFTLTILIKMYGRNGQLDKVFELADTLPKQ-- 973
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTM-------MSQAGLEPSAQTYTKLMCGYAKHG 278
+ F + + G +M M AG++ A+T+ L+ G +K G
Sbjct: 974 ----YGFTINTHVYTCLMSACITNGRYSMILEVYKCMKSAGIKADAKTFETLIQGASKGG 1029
Query: 279 ------DMDS-VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
D+ S V L SG + + II L + ID+
Sbjct: 1030 LYLEAADIISDVYSLSNSSGEAAIPNINTKIIEKLFAKVYSNVIDQ 1075
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 42/211 (19%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP ++ Y LL Y + F L+ + +E + V Y + LI+ YC+ G
Sbjct: 603 VP-NVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVY------NILIAAYCRIG 655
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A K+ + M+ + + +++LI+G + A+ I M GL P+ YT
Sbjct: 656 NVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYT 715
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G+ K G MD + + IL MS
Sbjct: 716 ALIGGHCKLGQMDIVGS-----------------------------------ILLEMSSN 740
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
G+ P+ TYT ++ GY K G+M R LL +
Sbjct: 741 GIRPNKITYTIMIDGYCKLGNMKEARELLNE 771
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 122/292 (41%), Gaps = 32/292 (10%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
NALL + + + L ++ +G+ +R++Y LI C+ G IE A K+
Sbjct: 505 NALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGC------CKWGKIEEAFKL 558
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
E M + F +N L+ G + + +L + G P+ TY L+ GY K
Sbjct: 559 KEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCK 618
Query: 207 HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS---DMASAEGILTMMSQAGLEPS 263
D I+ + K + S + N+LI ++ A + M G+ P+
Sbjct: 619 ---ADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPT 675
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD--IIHALAVSGHGEY--IDEVS 319
TY+ L+ G G +D + + + + N L + + GH + +D V
Sbjct: 676 CATYSSLIHGMCCIGRVDEAKEIFEE----MRNEGLLPNVFCYTALIGGHCKLGQMDIVG 731
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+I+ LE MS G+ P+ TYT ++ GY K G+M R LL +
Sbjct: 732 SIL---------LE---MSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNE 771
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 104/283 (36%), Gaps = 57/283 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L++ D L + + G PN TY + L+ YC+ IE
Sbjct: 570 DTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTY------ALLLEGYCKADRIE 623
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K + + + +S V+N LI + + ++ A + M G+ P+ TY+ L+
Sbjct: 624 DAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLI 683
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSEL--FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G G +D K ++ + L C++ + L D+ + IL MS G
Sbjct: 684 HGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGS--ILLEMSSNG 741
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
+ P+ TYT ++ GY K G+M R LL +
Sbjct: 742 IRPNKITYTIMIDGYCKLGNMKEARELLNE------------------------------ 771
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
M + G+ P TY L GY K ++
Sbjct: 772 -----------------MIRNGIAPDTVTYNALQKGYCKEREL 797
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 115/285 (40%), Gaps = 26/285 (9%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+ N VT SN+ L+ C+ GN+E ++L+ M +K + +N LI+G +
Sbjct: 495 KGLAANTVT-----SNA-LLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCK 548
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFS 231
+ A + M Q +P TY LM G A G +D + + K + ++
Sbjct: 549 WGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVPNVYT 608
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLA 288
+ L + + A + +E S+ Y L+ Y + G++ +R +
Sbjct: 609 YALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLRDAMK 668
Query: 289 QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
G Y +IH + G +DE I M GL P+
Sbjct: 669 SRGILPTCATYSSLIHGMCCIGR---VDEAKEIF------------EEMRNEGLLPNVFC 713
Query: 349 YTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
YT L+ G+ K G MD + +L + S+ + + I + + + G+
Sbjct: 714 YTALIGGHCKLGQMDIVGSILLEMSSNGIRPN--KITYTIMIDGY 756
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 130/346 (37%), Gaps = 59/346 (17%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS--------------- 126
D+ + + + D K+E G+ PN VTY +I
Sbjct: 254 DVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFK 313
Query: 127 ----NSK----------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
SK LIS + E A ++L M F +E VFNALI G+ +
Sbjct: 314 DRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRK 373
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM---DSIKTKIPSLKPQSELFLC 229
DM A + M+ G++P+ T+ L+ G+ + M + + I S + +C
Sbjct: 374 GDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVC 433
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK-HGDMDSVR---R 285
S+ + L + S SA I+T + + S T L+ G K G +++ +
Sbjct: 434 -SYVIHRL--MERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFK 490
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV-------------CFVNICFHW- 331
L A G + ++H L G+ E + EV + + C W
Sbjct: 491 LAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWG 550
Query: 332 -LEGPM-----MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+E M Q +P TY LM G A G +D + RLL +
Sbjct: 551 KIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHE 596
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/329 (20%), Positives = 131/329 (39%), Gaps = 36/329 (10%)
Query: 72 VHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLI 131
V G ++ YNAL+ + + + PN +TY S LI
Sbjct: 354 VKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITY------SILI 407
Query: 132 SKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
+C+ G ++ A + M + +N+LI G + D+++AE + M+ G+E
Sbjct: 408 DSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVE 467
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
P+A T+T L+ GY K + + ++F + ++ MA A +
Sbjct: 468 PTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASEL 527
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAV 308
+ + ++P+ TY L+ GY + G +D LL Q G Y +I L
Sbjct: 528 FDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCS 587
Query: 309 SGH----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
+G ++ID+ + + ++ + Y+ L+ GY + G
Sbjct: 588 TGRVSKAKDFIDD-------------------LHKQNVKLNEMCYSALLHGYCQEG---R 625
Query: 365 IRRLLAQNGSSLVNGDYLDII-HALAVSG 392
+ L+ + + G +D++ HA+ + G
Sbjct: 626 LMEALSASCEMIQRGINMDLVCHAVLIDG 654
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 115/287 (40%), Gaps = 34/287 (11%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K+ GI PN T+ + LIS C + A+++ + + ++ +E +N LI
Sbjct: 495 KMIDNGITPNVYTF------TALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIE 548
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G+ + + A +L M Q GL P TY L+ G G + K I L Q+
Sbjct: 549 GYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKL 608
Query: 228 --LCFSFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+C+S L L+ + AS E M Q G+ + L+ G K D +
Sbjct: 609 NEMCYSALLHGYCQEGRLMEALSASCE-----MIQRGINMDLVCHAVLIDGALKQPDRKT 663
Query: 283 VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
LL + D ++I+ + + + A C W +M
Sbjct: 664 FFDLLKDMHDQGLRPD--NVIYTSMIDTYSKEGSFKKAFEC-------W---DLMVTEEC 711
Query: 343 EPSAQTYTKLMCGYAKHGDMDS----IRRLLAQN--GSSLVNGDYLD 383
P+ TYT LM G K G+MD +R+ A N +S+ G +LD
Sbjct: 712 FPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLD 758
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 120/290 (41%), Gaps = 39/290 (13%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S L+ + G I+ A +++ + F + V+NALI + D+ AE + + MS
Sbjct: 334 SGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSL 393
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSD 244
L P+ TY+ L+ + + G +D + + +++ N LI D
Sbjct: 394 MNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAY---NSLINGQCKFGD 450
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLD 301
+++AE + M+ G+EP+A T+T L+ GY K + +L + +G + +
Sbjct: 451 LSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTA 510
Query: 302 IIHALAVSGH----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
+I L + E DE + + ++P+ TY L+ GY
Sbjct: 511 LISGLCSTNKMAEASELFDE-------------------LVERKIKPTEVTYNVLIEGYC 551
Query: 358 KHGDMDSIRRLLA---QNGSSLVNGDYLDIIHALAVSGH----GEYIDEI 400
+ G +D LL Q G Y +I L +G ++ID++
Sbjct: 552 RDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDL 601
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 115/303 (37%), Gaps = 70/303 (23%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN------------------------ 139
DF+ L Q ++ N + Y S L+ YCQ+G
Sbjct: 596 DFIDDLHKQNVKLNEMCY------SALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHA 649
Query: 140 --IEGATK---------ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
I+GA K +L+ M D+ ++ ++I +S+ A +M
Sbjct: 650 VLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTE 709
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
P+ TYT LM G K G+MD + + ++ P S + CF LT
Sbjct: 710 ECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTK-----EG 764
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YL 300
+M A G+ M + GL + T+ ++ G+ K G ++L++ + + D Y
Sbjct: 765 NMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYS 823
Query: 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+I+ SG+ V A V W M GLEP Y L+ G +G
Sbjct: 824 TLIYEYCRSGN------VGASVKL------W---DTMLNRGLEPDLVAYNLLIYGCCVNG 868
Query: 361 DMD 363
++D
Sbjct: 869 ELD 871
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 76/372 (20%), Positives = 150/372 (40%), Gaps = 72/372 (19%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G+ P+ T S ++ C+ + A + + +M F +S +N LI+G +
Sbjct: 220 GVRPDPYTC------SAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKG 273
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD-------------------SI 213
+ ++ A + + GL TY L+ G+ + + ++
Sbjct: 274 DRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAV 333
Query: 214 KTKIPSLKPQSELFLCFSFQLT--------NLLI---LVSS-----DMASAEGILTMMSQ 257
+ L+ Q ++ + + NL + L++S D+ AE + + MS
Sbjct: 334 SGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSL 393
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
L P+ TY+ L+ + + G +D S + Q G G+ + ++L ++G ++
Sbjct: 394 MNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGI----GETVYAYNSL-INGQCKF 448
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQ 371
D +A F+ M+ G+EP+A T+T L+ GY K + +L +
Sbjct: 449 GDLSAAESLFIE----------MTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMID 498
Query: 372 NGSSLVNGDYLDIIHALAVSGH----GEYIDEIIS-KIQPG-VGYSADAANHIYHLINKG 425
NG + + +I L + E DE++ KI+P V Y+ I G
Sbjct: 499 NGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNV----LIEGYCRDG 554
Query: 426 QIDAAYRIVNTL 437
+ID A+ ++ +
Sbjct: 555 KIDKAFELLEDM 566
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N ++R + T L+++ GI P+ VTY S LI +YC+ GN+ + K
Sbjct: 787 HNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTY------STLIYEYCRSGNVGASVK 840
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ + M ++ +N LIYG ++ A + M + G+ P + K
Sbjct: 841 LWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDNKYLQK 894
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 107/273 (39%), Gaps = 36/273 (13%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL + S +PN TY + +IS YC++ + A + E M+++ + +
Sbjct: 959 FLKLIRSDNYKPNVHTY------TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTT 1012
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTKIPSLKPQ 223
LI GH +A + + A ++ +MS G P+ TY ++ G K G ++ K + Q
Sbjct: 1013 LIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQ 1072
Query: 224 SELFLCFSFQLTNLLILVS-----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
E IL+S +DM A L M + G +P YT L+ + +
Sbjct: 1073 IEA------DGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQN 1126
Query: 279 DMDSVRRLLAQS---GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
M +L + G + Y +I +VS V F
Sbjct: 1127 MMKDSEKLFDEVIKLGLAPTKETYTSMICGYCRE------KKVSLAVKFFQ--------- 1171
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
MS G P + +Y L+ G K +D R+L
Sbjct: 1172 KMSDHGCAPDSISYGALISGLCKESRLDEARQL 1204
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y A++ Y E +++ QG+ PN TY + LI +C+ GN
Sbjct: 971 NVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTY------TTLIDGHCKAGNFS 1024
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +++E M ++ F + +N+++ G + A +L Q +E TYT L+
Sbjct: 1025 KAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILI 1084
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELF--LCFSFQLTNLLILVSSDMASAEGILTM 254
K DM+ K +P L+ L +F N+ M +E +
Sbjct: 1085 SEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNM-------MKDSEKLFDE 1137
Query: 255 MSQAGLEPSAQTYTKLMCGYAK 276
+ + GL P+ +TYT ++CGY +
Sbjct: 1138 VIKLGLAPTKETYTSMICGYCR 1159
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 115/284 (40%), Gaps = 42/284 (14%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F K+ G+ PN + Y S +IS C+ G+++ A ++LE M + + +
Sbjct: 888 FFHKVTKMGLSPNLINY------SSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 941
Query: 165 LIYGHSQANDMASA-EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
LI+G + A L ++ +P+ TYT ++ GY K + + +K Q
Sbjct: 942 LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 1001
Query: 224 SELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
L + LI + + + A ++ +MS G P+ TY ++ G K G
Sbjct: 1002 G---LVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRA 1058
Query: 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFH---------- 330
+ +LL + + D + + + +S + D A+V F+N F
Sbjct: 1059 EEAFKLLNTGFQNQIEAD--GVTYTILISEQCKRADMNQALV-FLNKMFKVGFQPDIHLY 1115
Query: 331 ------WLEGPMMSQA----------GLEPSAQTYTKLMCGYAK 358
+ MM + GL P+ +TYT ++CGY +
Sbjct: 1116 TTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCR 1159
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 113/294 (38%), Gaps = 61/294 (20%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++ ++G+ P+ TY+ +I YC++GN+ A + + M ++ F + +I
Sbjct: 821 EMSARGVYPDSCTYKYIIVG------YCRNGNVLEADRWICEMMERGFVVDNATLTLIIT 874
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
+ + + A +++ GL P+ Y+ ++ G K G S+K EL
Sbjct: 875 AFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRG----------SVKQAFEL- 923
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
L M + G +P+ T+T L+ G K G + RL
Sbjct: 924 ------------------------LEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLF 959
Query: 288 AQSGSSLVNGD-YLDIIHALA--VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
+ L+ D Y +H +SG+ + A + F M + GL P
Sbjct: 960 LK----LIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLF----------ERMKEQGLVP 1005
Query: 345 SAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE 395
+ TYT L+ G+ K G+ + L++ G Y I+ L G E
Sbjct: 1006 NTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAE 1059
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/319 (18%), Positives = 128/319 (40%), Gaps = 30/319 (9%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++ + + G ++ A ++ MR++ ++ V N +I ++ + A + MS G
Sbjct: 767 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 826
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+ P + TY ++ GY ++G++ I + + + + L S + A
Sbjct: 827 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 886
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG------DYLDII 303
+++ GL P+ Y+ ++ G K G + LL + + NG + +I
Sbjct: 887 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEE---MVKNGWKPNVYTHTSLI 943
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
H L G E A F+ ++ +P+ TYT ++ GY K +
Sbjct: 944 HGLCKKGWTE-----RAFRLFLK---------LIRSDNYKPNVHTYTAMISGYCKEEKLS 989
Query: 364 SIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH--- 417
L + + G Y +I +G+ E++ ++ G+ + +
Sbjct: 990 RAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELM-ELMSNEGFFPNTCTYNSI 1048
Query: 418 IYHLINKGQIDAAYRIVNT 436
+ L +G+ + A++++NT
Sbjct: 1049 VDGLCKRGRAEEAFKLLNT 1067
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 134/338 (39%), Gaps = 39/338 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ N + +L KL + G+EP+ TY LI YC+ G ++
Sbjct: 285 DVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDG------YCKMGMLQ 338
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A KIL+ K F E + +LI G Q +++ A + GL+P+ Y L+
Sbjct: 339 NAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLI 398
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA--- 258
G + G I + + SE NL+I M +M+ A
Sbjct: 399 KGLCQEG---LILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAK 455
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
G P T+ L+ GY K M++ ++L + S V D Y +++ L+ + E +
Sbjct: 456 GYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDL 515
Query: 316 DEVSAIV----CFVN-ICFHWLEGPMMS---------------QAGLEPSAQTYTKLMCG 355
E + C N I ++ L + G+ P ++ ++ G
Sbjct: 516 METFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISG 575
Query: 356 YAKHGDMDS----IRRLLAQNGSSLVNGDYLDIIHALA 389
+A +GD+ RR+ Q S Y +I+A A
Sbjct: 576 FANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFA 613
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/346 (18%), Positives = 130/346 (37%), Gaps = 65/346 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNA++ + +++ + ++++ GI P+ T+ + I +C+ A +
Sbjct: 114 YNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTF------TIRIKSFCRTKRPHSALR 167
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M + ++ + ++ G + N A + M + G+ P T+ KL+
Sbjct: 168 LLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLC 227
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G++ + + + + F+F + + ++ A +L + + GL P
Sbjct: 228 KKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVV 287
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
TY L+CG K+ ++ + L + LVNG
Sbjct: 288 TYNTLICGLCKNSNVVEAEKYLHK----LVNG---------------------------- 315
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG------ 379
GLEP TY L+ GY K G + + ++L ++ G
Sbjct: 316 ---------------GLEPDGFTYNTLIDGYCKMGMLQNAEKILQ---GAICKGFVPDEF 357
Query: 380 DYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG 425
Y +I+ L + ID ++ +G +Y+++ KG
Sbjct: 358 TYCSLINGLC---QNDEIDRALALFNAALGKGLKPTVILYNMLIKG 400
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 122/290 (42%), Gaps = 25/290 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTD-FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
++ YN LL + L EH ++ + +P+ T+ L+ C+ +
Sbjct: 6 NVFTYNKLL-LQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRG------LCRSNQL 58
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A K+L M++ + ++NALI G+S+A D A L M + P+ TYT +
Sbjct: 59 EKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNI 118
Query: 201 MCGYAK-HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
+ G K D++K + ++ + +++ + + + A+ +L M+ G
Sbjct: 119 VDGLCKAERTRDAVKL-LDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRG 177
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
P TY + G K +D R+ LA+ + Y +I+ L SG +D S
Sbjct: 178 YFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGD---LDSAS 234
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
++ MS G P TY+ L+ G+ K G+++ LL
Sbjct: 235 RML------------DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 272
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 10/209 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D + YNAL+ Y + FLA++ P VTY ++ C+
Sbjct: 74 VP-DDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG------LCKAE 126
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
A K+L+ MRDK + +N ++ G + + A+ +L M+ G P TY
Sbjct: 127 RTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYN 186
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
+ G K +D + K + P + + ++ + L S D+ SA +L MS
Sbjct: 187 SFIKGLCKCDRVDEAR-KFLARMPVTPDVVSYTTVINGL--CKSGDLDSASRMLDHMSNR 243
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
G P TY+ L+ G+ K G+++ LL
Sbjct: 244 GCTPDVVTYSSLIDGFCKGGEVERAMGLL 272
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 162/396 (40%), Gaps = 50/396 (12%)
Query: 83 ISHYNALLRVYLDNEHTFSPT-DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
I YN +L VY + + +A ++ G+ P+R TY LIS + + Y +
Sbjct: 207 IVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKE----- 261
Query: 142 GATKILEFMRDKTFPISEGVFNAL--IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
A ++ + M+ F + FN+L +YG ++ +D A ++ M + G PS TY
Sbjct: 262 -AAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHD--EAIEVIQEMERVGCPPSVVTYNS 318
Query: 200 LMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
L+ Y K G ++ + ++ +KP + ++ ++ L D A E
Sbjct: 319 LISSYVKDGLLEQAVALKQEMEVKGIKPD---VVTYTTLISGLDRAGKIDAAIVE--YDE 373
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
M + G +P+ TY L+ + G + + + S+ D + LAV G
Sbjct: 374 MVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGL 433
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQ 371
EVS + M +AG P TY L+ Y++ G D I + + +
Sbjct: 434 DSEVSGVF------------KEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMME 481
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ-----PGVGYSADAANHIYHLINKGQ 426
G Y ++ ALA G E +++ ++++ P YS + H Y
Sbjct: 482 AGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPD-EYSYSSLLHAYA------ 534
Query: 427 IDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTN 462
A R+ A S +I E++ +LV+ +V N
Sbjct: 535 --NAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVN 568
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 133/339 (39%), Gaps = 64/339 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI +N LL V+ N + +++ G P R TY LIS+ Y + G +
Sbjct: 417 DIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISS------YSRCGLFD 470
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M + +NA++ ++ AE + M + +P +Y+ L+
Sbjct: 471 LAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLL 530
Query: 202 CGYAKHGDMDSIK-------------------------TKIPSLKPQSELFLCFSFQLTN 236
YA +D +K +K+ +L + FL + +
Sbjct: 531 HAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCS 590
Query: 237 LLILVSSDMAS----------AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
L I V + M S E IL++M ++ + SA TY LM Y++ GD + +
Sbjct: 591 LDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENI 650
Query: 287 LAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSA----------IVCFVNICFHWLE 333
L + SS V D Y +I+A G + + + +V + ++
Sbjct: 651 LTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVS 710
Query: 334 GPMMSQA----------GLEPSAQTYTKLMCGYAKHGDM 362
M +A G +P+ +TY ++ GY ++G +
Sbjct: 711 NSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKL 749
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++S Y ++ + KIL M++ +S +N+L++ +S+ D E ILT + +G
Sbjct: 599 MVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSG 658
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
+ P +Y ++ Y + G M + K LKP + F + VS+
Sbjct: 659 VRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIF------VKSYVSNS 712
Query: 245 M-ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
M A ++ M G +P+ +TY ++ GY ++G + +
Sbjct: 713 MFEEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 753
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 158/398 (39%), Gaps = 58/398 (14%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P + YN+L+ Y+ + ++E +GI+P+ VTY LIS + G
Sbjct: 310 PPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLD------RAGK 363
Query: 140 IEGA-TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
I+ A + E +R+ P + +NALI H + + AG P T+
Sbjct: 364 IDAAIVEYDEMVRNGCKP-NLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWN 422
Query: 199 KLMCGYAKHGDMDSIKTKIPSLK-----PQSELFLCF--SFQLTNLLILVSSDMASAEGI 251
L+ + ++G + +K P+ + ++ S+ L L A I
Sbjct: 423 TLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDL-------AMQI 475
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSSLV----N 296
M +AG+ P TY ++ A+ G + +L A+ S SSL+ N
Sbjct: 476 YKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYAN 535
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIV---CFVNICFH--------WLEGPMMSQAGLEPS 345
LD + AL+ + E I+ + +V VN + +LE + Q
Sbjct: 536 AKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLE---LRQKRCSLD 592
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN---GDYLDIIHALAVSGHGEYIDEIIS 402
++ Y K+ + + ++L+ S +N Y ++H + G E + I++
Sbjct: 593 INVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILT 652
Query: 403 KIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
+I+ G D ++ IY KGQ+ A R+ + +
Sbjct: 653 EIKSS-GVRPDRYSYNTVIYAYGRKGQMKEASRLFSEM 689
Score = 47.8 bits (112), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 68/150 (45%), Gaps = 9/150 (6%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + L + YN+L+ +Y + L +++S G+ P+R +Y + +I Y
Sbjct: 621 ESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSY------NTVIYAYG 674
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G ++ A+++ M+ +N + + + A ++ M G +P+ +
Sbjct: 675 RKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNER 734
Query: 196 TYTKLMCGYAKHGDMDSIK---TKIPSLKP 222
TY ++ GY ++G + K + +P L P
Sbjct: 735 TYNSIVEGYCRNGKLTDAKIFVSNLPQLHP 764
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 151/380 (39%), Gaps = 46/380 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN++L V + E ++ PNR T+ L++ C++G +
Sbjct: 165 DVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNG------LCKNGKTD 218
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+ + M K P + ++ ++ G QA +L M +G P + T L+
Sbjct: 219 DALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALL 278
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ K G +D + + + + + + + + M +AG+E
Sbjct: 279 DGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIE 338
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P YT L+ G+ + G +D +L Q G S Y +I G +D+
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVG---LLDKA 395
Query: 319 SAIVCFV--NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN---G 373
++ + N CF P++ TYT L+CG ++G +D R++ Q G
Sbjct: 396 RSLQLEISKNDCF--------------PTSCTYTILICGMCRNGLLDEARQIFNQMENLG 441
Query: 374 SSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYS------------ADAANHIYHL 421
S + +I L +G E + K++ G S D AN +H
Sbjct: 442 CSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANG-FHR 500
Query: 422 INKGQIDAAYRIVNTLARSA 441
+++ + A+R+++ + ++
Sbjct: 501 VDREE--DAFRVLDQMVKNG 518
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 107/294 (36%), Gaps = 59/294 (20%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P + Y +L + T L ++ G P+ +T L+ +C+ G
Sbjct: 232 IPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDG------FCKLG 285
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
I+ A +L+ + + + +++LI G +A + M +AG+EP YT
Sbjct: 286 QIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYT 345
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G+ + G +D A +L M+Q
Sbjct: 346 ILIRGFCEVGMVD-----------------------------------YALNMLNDMTQR 370
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
GL P Y L+ G+ G +D R L ++++ + Y +I + +G +
Sbjct: 371 GLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNG---LL 427
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
DE I M G PS T+ L+ G K G+++ R L
Sbjct: 428 DEARQIF------------NQMENLGCSPSIMTFNALIDGLCKAGELEEARHLF 469
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 152/359 (42%), Gaps = 67/359 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ ++AL+ V++ + ++ ++GI P+ +TY LI +C++ +
Sbjct: 343 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDG------FCKENCLH 396
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ + M K ++ LI + +A + + +S GL P+ TY L+
Sbjct: 397 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 456
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G+ + G +++ K ELF M G+
Sbjct: 457 LGFCQSGKLNAAK----------ELF-------------------------QEMVSRGVP 481
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
PS TY L+ G +G+++ + + +S +L G Y IIH + + +D+
Sbjct: 482 PSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC---NASKVDDA 538
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM---DSIRRLLAQNGSS 375
++ C +S G++P TY ++ G K G + D + R + ++G +
Sbjct: 539 WSLFC------------SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCT 586
Query: 376 LVNGDYLDIIHA-LAVSGHGEYIDEIISKIQPGVGYSADAA--NHIYHLINKGQIDAAY 431
+ Y +I A L SG + E+I +++ G+SAD++ + +++ ++D ++
Sbjct: 587 PDDFTYNILIRAHLGGSGLISSV-ELIEEMKV-CGFSADSSTIKMVIDMLSDRRLDKSF 643
Score = 45.8 bits (107), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 105/288 (36%), Gaps = 62/288 (21%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++E +GI+ + VTY S LI C DG + K+L M + F+ALI
Sbjct: 299 EMEMKGIKADVVTY------SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALID 352
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
+ + A+ + M G+ P TY L+ G+ K
Sbjct: 353 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN------------------- 393
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
C + A + +M G EP TY+ L+ Y K +D RL
Sbjct: 394 -C---------------LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLF 437
Query: 288 AQ-SGSSLVNG--DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
+ S L+ Y ++ SG E L M+S+ G+ P
Sbjct: 438 REISSKGLIPNTITYNTLVLGFCQSGKLNAAKE--------------LFQEMVSR-GVPP 482
Query: 345 SAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDIIHALA 389
S TY L+ G +G+++ I + ++ +L G Y IIH +
Sbjct: 483 SVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMC 530
>gi|255660930|gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 484
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 93/218 (42%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I Y+AL +V + K+ ++GIEP R T+ LI +
Sbjct: 108 ELGVERTIKSYDALFKVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+++ M AE M + ++P+
Sbjct: 162 LSGKVETANRFFEDMKSREITPDVITYNTMINGYNRVKKMEEAEKYFLEMKERKIDPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GYA +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYASVDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCN-----AEKMSEARS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M + P+ + + +L+ K G++D+ +L
Sbjct: 277 ILKEMVDKYVAPTDNSIFMRLISSQCKAGNLDAAADVL 314
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 111/278 (39%), Gaps = 24/278 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKAG---IVQESVKLFQKMEELGVER 113
Query: 231 SFQLTNLLILVSSDMAS---AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + + L V S ++ M G+EP+ T+ L+ G+ G +++ R
Sbjct: 114 TIKSYDALFKVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S + D I + ++G+ A F+ M + ++P+
Sbjct: 174 EDMKSREITPDV--ITYNTMINGYNRVKKMEEAEKYFLE----------MKERKIDPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPG 407
TYT L+ GYA +D RL+ + + + + L + E + E S ++
Sbjct: 222 TYTTLIKGYASVDRVDDALRLVEEMKGLGIKPNAITYSTLLPGLCNAEKMSEARSILKEM 281
Query: 408 V-GYSADAANHIY-HLINK----GQIDAAYRIVNTLAR 439
V Y A N I+ LI+ G +DAA ++ + R
Sbjct: 282 VDKYVAPTDNSIFMRLISSQCKAGNLDAAADVLKAMIR 319
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 72/192 (37%), Gaps = 17/192 (8%)
Query: 45 LFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTD 104
+F+ L S C GNL L VP + HY L+ Y
Sbjct: 293 IFMRLISSQCK-----AGNLDAAADVLKAMIRLSVPTEAGHYGVLIEYYCKAGQYDKAVK 347
Query: 105 FLAKLESQGI--EPNRVTYQQLISNSKLISKYCQDGNIEGA-TKILEFMR-DKTFPISEG 160
L KL + I P + +L + + LI C +G A T + + M+ P S
Sbjct: 348 LLDKLIEKDIILRPQSTLHMELSAYNPLIEYLCNNGQTAKAETLVRQLMKLGVQDPTS-- 405
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
N LI GHSQ SA +L +M + ++ Y L+ Y K + K + S+
Sbjct: 406 -LNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKAALDSM 464
Query: 221 -----KPQSELF 227
P S LF
Sbjct: 465 IENDHLPDSSLF 476
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 80/439 (18%), Positives = 160/439 (36%), Gaps = 84/439 (19%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + G ++ + K+ + M + + ++AL S+ ++ M G
Sbjct: 86 MIDSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVISRRGRYMMSKRYFNKMVNEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMASA 248
+EP+ T+ L+ G+ G +++ +K + ++ + N V M A
Sbjct: 146 IEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREITPDVITYNTMINGYNRVKK-MEEA 204
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
E M + ++P+ TYT L+ GYA +D RL+ +
Sbjct: 205 EKYFLEMKERKIDPTVVTYTTLIKGYASVDRVDDALRLVEE------------------- 245
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
M G++P+A TY+ L+ G M R +
Sbjct: 246 ----------------------------MKGLGIKPNAITYSTLLPGLCNAEKMSEARSI 277
Query: 369 LAQNGSSLV----NGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHL 421
L + V N ++ +I + +G+ + +++ K + +A ++ I +
Sbjct: 278 LKEMVDKYVAPTDNSIFMRLISSQCKAGNLDAAADVL-KAMIRLSVPTEAGHYGVLIEYY 336
Query: 422 INKGQIDAAYRIVNTLARSANI----------------------NGEQLPVGGFLVRHMV 459
GQ D A ++++ L I N Q LVR ++
Sbjct: 337 CKAGQYDKAVKLLDKLIEKDIILRPQSTLHMELSAYNPLIEYLCNNGQTAKAETLVRQLM 396
Query: 460 KTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKT 519
K GV I +G D+A+ ++ + R ++ E+ LV+ +K
Sbjct: 397 KL---GVQDPTSLNTLIRGHSQEGSPDSAFELLKIMLRR-KVDSEKSAYDS-LVQSYLKK 451
Query: 520 NQPIDKVLAVCHRLTDENL 538
N+P D A+ + +++L
Sbjct: 452 NEPADAKAALDSMIENDHL 470
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 115/532 (21%), Positives = 209/532 (39%), Gaps = 85/532 (15%)
Query: 43 VLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSP 102
V L+ + +C L G P LD+ Y +++ D++
Sbjct: 76 VFLYTSVIHGYCKAGDLDTGYFRAVTP--------KASLDVISYTTVIKGLADSKRIDEA 127
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
+ +L++ G PN V Y + +I + G IE K E M + + +
Sbjct: 128 CELFEELKTAGCSPNVVAY------TAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTY 181
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK-------T 215
+I G +A + A + M Q G P TYT L+ G++K MD + T
Sbjct: 182 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 241
Query: 216 KIPSLKPQSELFLCFSFQLTNLLILVSSDMAS-AEGILTMMSQAGLEPSAQTYTKLMCGY 274
K P +P + + L DM + A+ ++ M + G EP +T L+ Y
Sbjct: 242 KGP--EPTAVTYGSIVHGFCKL------DMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 293
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
G + ++L + + D Y +I L +G V H
Sbjct: 294 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR-------------VPEARHV 340
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNG--------SSLVNGD 380
+ M + G P A TY ++ ++K G++++ I L+A++G +SL++G
Sbjct: 341 FDS--MIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDG- 397
Query: 381 YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLAR 439
Y+ + G Y + S I+P +A N + H L G+ D A+ + +
Sbjct: 398 YVKLER--VDQAFGVYDRMVASGIKP----NAVTFNVLMHGLFKDGKTDRAFSLFKEM-- 449
Query: 440 SANINGEQLPVGGFLVRHMVKTNQPG-VGYSADAANHIYHLINKGQIDAAY---RIVNTL 495
+ E++P LV + + + G G ++A +I++G I + ++ +L
Sbjct: 450 ---LEKEEVPPT--LVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSL 504
Query: 496 ARSANINGEQLPVGGFLVRHMVK--TNQPIDKVLAVCHRLTDENLHPRAFNL 545
A++ I P LV MVK N + A+ L D ++ A+++
Sbjct: 505 AKAGRI-----PEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDV 551
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 182/473 (38%), Gaps = 66/473 (13%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G EP V+Y +IS I K ++ A K M D F LI+G +A
Sbjct: 2 GCEPTIVSYNTVISGLASIDK------MDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKA 55
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+L + P YT ++ GY K GD+D+ ++ P++ L + S+
Sbjct: 56 GQPQVGHKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDT--GYFRAVTPKASLDV-ISY 111
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSVRRLLAQSG 291
+ S + A + + AG P+ YT ++ G K G + D ++ SG
Sbjct: 112 TTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSG 171
Query: 292 SSLV--NGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY 349
SS V Y +I L + + + + M Q G P TY
Sbjct: 172 SSCVPTRTTYTVVIDGLC---KAQMLPDACKVF------------EQMVQKGCVPDTITY 216
Query: 350 TKLMCGYAKHGDMDSIRRLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI-- 404
T L+ G++K MD R+LL G Y I+H E+I+++
Sbjct: 217 TTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRE 276
Query: 405 ---QPGVGYSADAANHIYHLINKGQIDAAYRIVNTL-ARSAN-------------INGEQ 447
+PG+ + + + ++KG+ + AY+++ + AR + +
Sbjct: 277 RGCEPGLFI---FTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGR 333
Query: 448 LPVGGFLVRHMVKTNQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSANINGE 504
+P + M++ G + DA + I + G ++AA I+ +A+S G
Sbjct: 334 VPEARHVFDSMIEK-----GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG--VGP 386
Query: 505 QLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKED 557
L+ VK + +D+ V R+ + P A VL+ H L +D
Sbjct: 387 DCFAYNSLMDGYVKLER-VDQAFGVYDRMVASGIKPNAVTFNVLM--HGLFKD 436
>gi|15224753|ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334184304|ref|NP_001189552.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g19280
gi|3135258|gb|AAC16458.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251769|gb|AEC06863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251770|gb|AEC06864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 693
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 114/272 (41%), Gaps = 45/272 (16%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
T L KL+ GI Q +S S +I +C+ G E A K++ R + + V+
Sbjct: 326 TSVLFKLKLFGIS------QDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRP---NIFVY 376
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS----IKTKIP 218
++ + DM A I + + GL P YT ++ GY G D +
Sbjct: 377 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 219 SLKPQSELFLCFSFQLTNLLILVSS-----DMASAEGILTMMSQAGLEPSAQTYTKLMCG 273
S P S LT IL+ + ++ AE + M GL+ TY LM G
Sbjct: 437 SGNPPS---------LTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 274 YAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFH 330
Y K ++ V L+ + S+ ++ D Y +IH++ V G YIDE + I+
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG---YIDEANEII-------- 536
Query: 331 WLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ + G PS +T ++ G++K GD
Sbjct: 537 ----SELIRRGFVPSTLAFTDVIGGFSKRGDF 564
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 129/309 (41%), Gaps = 29/309 (9%)
Query: 109 LESQGIEPNRVTYQQLISNSK---------LISKYCQDGNIEGATKILEFMRDKTFPISE 159
L G+E R + ++S + I KYC DG + ++L M+
Sbjct: 247 LRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDI 306
Query: 160 GVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS 219
F I +A + A +L + G+ + + + ++ G+ K G + I S
Sbjct: 307 VAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHS 366
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
+ + +F+ SF L+N I + DM A I + + GL P YT ++ GY G
Sbjct: 367 FRLRPNIFVYSSF-LSN--ICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGR 423
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS-AIVCFVNICFHWLEGPMMS 338
D + G+ L +G+ + + + G +S A F N M
Sbjct: 424 TD---KAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN----------MK 470
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGE 395
GL+ TY LM GY K ++ + L+ + S+ ++ D Y +IH++ V G+ +
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 396 YIDEIISKI 404
+EIIS++
Sbjct: 531 EANEIISEL 539
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 101/264 (38%), Gaps = 30/264 (11%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G+ P+ V Y + +I YC G + A + + P S LI S+
Sbjct: 403 GLLPDCVCY------TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRF 456
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
++ AE + M GL+ TY LM GY K ++ + I ++ +
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG---ISPDV 513
Query: 233 QLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
N+LI +V + A I++ + + G PS +T ++ G++K GD L
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFY 573
Query: 290 SGSSLVNGDYLD---IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
+ D + ++H + E AIV F + AGL+P
Sbjct: 574 MADLRMKPDVVTCSALLHGYCKAQRME-----KAIVLF----------NKLLDAGLKPDV 618
Query: 347 QTYTKLMCGYAKHGDMDSIRRLLA 370
Y L+ GY GD++ L+
Sbjct: 619 VLYNTLIHGYCSVGDIEKACELIG 642
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 29/162 (17%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN----------- 127
+ LD+ YN L+ Y + + ++ S GI P+ TY LI +
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 128 ---SKLISK---------------YCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
S+LI + + + G+ + A + +M D +AL++G+
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGY 593
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 211
+A M A + + AGL+P Y L+ GY GD++
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIE 635
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 122/295 (41%), Gaps = 32/295 (10%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
E+ DI+ YN ++ +FL K + +G+ PN+ +Y + L+ Y
Sbjct: 333 AEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSY------TPLMHAY 386
Query: 135 CQDGNIEGATKILEFMRDKTFPISE-------GVFNALIYGHSQANDMASAEGILTMMSQ 187
C+ G+ A +L F I+E + A I+G ++ A + M +
Sbjct: 387 CKQGDYVKAAGML-------FRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMME 439
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
G+ P AQ Y LM G K+G ++K + + ++ + F + + ++
Sbjct: 440 KGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDE 499
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
A I ++ + G++P Y ++ G+ K G M L + + D + ++
Sbjct: 500 AIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPD--EYTYSTV 557
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ G+ + D SA+ F G MM +P+ TYT L+ G+ K DM
Sbjct: 558 IDGYVKQHDMSSALKMF---------GQMMKHK-FKPNVITYTSLINGFCKKADM 602
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 109/292 (37%), Gaps = 59/292 (20%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ YN ++ Y T L +L+ +G+ P TY LI+ +C+ G E
Sbjct: 236 VVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALING------FCKAGEFEA 289
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
++L M + ++ VFN +I + + A + M++ G P TY ++
Sbjct: 290 VDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMIN 349
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
K G + A+ L + GL P
Sbjct: 350 FSCKGG-----------------------------------RIKEADEFLEKAKERGLLP 374
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
+ +YT LM Y K GD +L A+ G Y IH + V HGE +V+
Sbjct: 375 NKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVV--HGEI--DVA 430
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+V M + G+ P AQ Y LM G K+G +++ LL++
Sbjct: 431 LMV-----------REKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSE 471
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 88/222 (39%), Gaps = 22/222 (9%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I YNA+++ + L K+++ P+ TY S +I Y + ++
Sbjct: 516 IVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTY------STVIDGYVKQHDMSS 569
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A K+ M F + + +LI G + DM AE + M L P+ TYT L+
Sbjct: 570 ALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVG 629
Query: 203 GYAKHGDMDSIKTKIPSLK------PQSELFLCFSFQLTN-----LLILVSSDMASAEGI 251
G+ K G + T I L P F LTN +LI M + +
Sbjct: 630 GFFKAGKPEK-ATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSL 688
Query: 252 L----TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ TMM G + Y ++ KHG +D+ + LL +
Sbjct: 689 ILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTK 730
Score = 46.2 bits (108), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 151/388 (38%), Gaps = 55/388 (14%)
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASA 248
G P Y ++ GY K GD+ + LK + L ++ + + +
Sbjct: 231 GCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAV 290
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM----DSVRRLLAQSGSSLVNGDYLDIIH 304
+ +LT M+ GL + + + ++ K+G + +++RR +A+ G Y +I+
Sbjct: 291 DQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRR-MAEMGCGPDITTYNTMIN 349
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
G + DE +LE + GL P+ +YT LM Y K GD
Sbjct: 350 FSCKGGRIKEADE-------------FLEKA--KERGLLPNKFSYTPLMHAYCKQGDYVK 394
Query: 365 IRRLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHL 421
+L A+ G Y IH + V HGE ++ + + +
Sbjct: 395 AAGMLFRIAEIGEKPDLVSYGAFIHGVVV--HGEIDVALMVREK---------------M 437
Query: 422 INKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTN-QPGVGYSADAANHIYHLI 480
+ KG A +I N L NG + P L+ M+ N QP V A + I
Sbjct: 438 MEKGVFPDA-QIYNVLMSGLCKNG-RFPAMKLLLSEMLDRNVQPDVYVFATLMD---GFI 492
Query: 481 NKGQIDAAYRIVNTLARSA---NINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDEN 537
G++D A +I + R I G + GF K + D L+ +++ + +
Sbjct: 493 RNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGF-----CKFGKMTD-ALSCLNKMKNVH 546
Query: 538 LHPRAFNLAVLIKAHVLKEDYTGAVETF 565
P + + +I +V + D + A++ F
Sbjct: 547 HAPDEYTYSTVIDGYVKQHDMSSALKMF 574
>gi|46518477|gb|AAS99720.1| At2g19280 [Arabidopsis thaliana]
gi|62319953|dbj|BAD94048.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|110738808|dbj|BAF01327.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 693
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 114/272 (41%), Gaps = 45/272 (16%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
T L KL+ GI Q +S S +I +C+ G E A K++ R + + V+
Sbjct: 326 TSVLFKLKLFGIS------QDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRP---NIFVY 376
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS----IKTKIP 218
++ + DM A I + + GL P YT ++ GY G D +
Sbjct: 377 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLK 436
Query: 219 SLKPQSELFLCFSFQLTNLLILVSS-----DMASAEGILTMMSQAGLEPSAQTYTKLMCG 273
S P S LT IL+ + ++ AE + M GL+ TY LM G
Sbjct: 437 SGNPPS---------LTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 274 YAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFH 330
Y K ++ V L+ + S+ ++ D Y +IH++ V G YIDE + I+
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG---YIDEANEII-------- 536
Query: 331 WLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+ + G PS +T ++ G++K GD
Sbjct: 537 ----SELIRRGFVPSTLAFTDVIGGFSKRGDF 564
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 129/309 (41%), Gaps = 29/309 (9%)
Query: 109 LESQGIEPNRVTYQQLISNSK---------LISKYCQDGNIEGATKILEFMRDKTFPISE 159
L G+E R + ++S + I KYC DG + ++L M+
Sbjct: 247 LRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDI 306
Query: 160 GVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS 219
F I +A + A +L + G+ + + + ++ G+ K G + I S
Sbjct: 307 VAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHS 366
Query: 220 LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
+ + +F+ SF L+N I + DM A I + + GL P YT ++ GY G
Sbjct: 367 FRLRPNIFVYSSF-LSN--ICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGR 423
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS-AIVCFVNICFHWLEGPMMS 338
D + G+ L +G+ + + + G +S A F N M
Sbjct: 424 TD---KAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN----------MK 470
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGE 395
GL+ TY LM GY K ++ + L+ + S+ ++ D Y +IH++ V G+ +
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 396 YIDEIISKI 404
+EIIS++
Sbjct: 531 EANEIISEL 539
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 101/264 (38%), Gaps = 30/264 (11%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G+ P+ V Y + +I YC G + A + + P S LI S+
Sbjct: 403 GLLPDCVCY------TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRF 456
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
++ AE + M GL+ TY LM GY K ++ + I ++ +
Sbjct: 457 GSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG---ISPDV 513
Query: 233 QLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
N+LI +V + A I++ + + G PS +T ++ G++K GD L
Sbjct: 514 ATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFY 573
Query: 290 SGSSLVNGDYLD---IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
+ D + ++H + E AIV F + AGL+P
Sbjct: 574 MADLRMKPDVVTCSALLHGYCKAQRME-----KAIVLF----------NKLLDAGLKPDV 618
Query: 347 QTYTKLMCGYAKHGDMDSIRRLLA 370
Y L+ GY GD++ L+
Sbjct: 619 VLYNTLIHGYCSVGDIEKACELIG 642
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 29/162 (17%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN----------- 127
+ LD+ YN L+ Y + + ++ S GI P+ TY LI +
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 128 ---SKLISK---------------YCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
S+LI + + + G+ + A + +M D +AL++G+
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGY 593
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 211
+A M A + + AGL+P Y L+ GY GD++
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIE 635
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 10/224 (4%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNA++ + H + ++ +GI P+ +TY S +I +C+ G A +
Sbjct: 79 YNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITY------SGMIDSFCRSGRWTDAEQ 132
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M ++ F+ALI + ++ AE I M + G+ P+ TY ++ G+
Sbjct: 133 LLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFC 192
Query: 206 KHGDMDSIKTKIPSL--KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
K ++ K + S+ K S + FS + D + I M + G+ +
Sbjct: 193 KQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD--NGMEIFCEMHRRGIVAN 250
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
TYT L+ G+ + GD+D+ + LL SS V +Y+ LA
Sbjct: 251 TVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 18/263 (6%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I+ C+ G+ E A +L M + ++NA+I + A+ + T M G
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 190 LEPSAQTYTKLMCGYAKHG---DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
+ P TY+ ++ + + G D + + + + ++ + FS L N L+ ++
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDV-VTFS-ALINALV-KEGKVS 163
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
AE I M + G+ P+ TY ++ G+ K ++ +R+L S + D + +
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
+ +D I C M + G+ + TYT L+ G+ + GD+D+ +
Sbjct: 224 NGYCKAKRVDNGMEIFC------------EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 367 RLLAQNGSSLVNGDYLDIIHALA 389
LL SS V +Y+ LA
Sbjct: 272 DLLNVMISSGVAPNYITFQSMLA 294
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ ++AL+ + + + +GI P +TY +I +C+ +
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDG------FCKQDRLN 198
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L+ M K+ F+ LI G+ +A + + I M + G+ + TYT L+
Sbjct: 199 DAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Query: 202 CGYAKHGDMDS 212
G+ + GD+D+
Sbjct: 259 HGFCQVGDLDA 269
>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 29/206 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I+ YNALL N ++++ +G+ PN TY L+S + GN
Sbjct: 759 NITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRV------GNKR 812
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ K+ M K F + G +N LI +++A M A +L M G P++ TY L+
Sbjct: 813 DSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIPNSSTYDVLI 872
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
CG+ K S +P+ + L S+Q A+ +L M + G
Sbjct: 873 CGWCK-----------LSCQPEMDRLLKLSYQ------------NEAKKLLREMCEKGHV 909
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL 287
PS T + ++ G D +RLL
Sbjct: 910 PSESTLMYISSNFSAPGKRDDAKRLL 935
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 26/232 (11%)
Query: 70 FSVHTGELDVPLDISH--YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
+H +D+ L+++ YN L+ V T L ++ +GI + VTY LI
Sbjct: 675 LQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRG 734
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
YC ++E A M + +NAL+ G S M A+ +++ M +
Sbjct: 735 ------YCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRE 788
Query: 188 AGLEPSAQTYTKLMCGYAKHGD-MDSIK------TK--IPSLKPQSELFLCFSFQLTNLL 238
GL P+A TY L+ G+ + G+ DSIK TK IP+ + L ++
Sbjct: 789 RGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYA------- 841
Query: 239 ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
+ M A +L M G P++ TY L+CG+ K + RLL S
Sbjct: 842 --KAGKMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLS 891
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 125/311 (40%), Gaps = 30/311 (9%)
Query: 68 DPFSVHTGELDVPL--DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI 125
+P SV + +++ L D YN+++ Y T + D L +++S G+ PN VTY LI
Sbjct: 568 EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILI 627
Query: 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM 185
C+ G IE +L M + + + L+ +S++ + I +
Sbjct: 628 GG------LCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKL 681
Query: 186 SQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVS 242
GL + Y L+ + G + + + + N LI
Sbjct: 682 VDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKG---ISADIVTYNALIRGYCTG 738
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLV-NGDYL 300
S + A + M +G+ P+ TY L+ G + +G M +L+++ LV N
Sbjct: 739 SHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTY 798
Query: 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+I+ VSGHG ++ +I + M G P+ TY L+ YAK G
Sbjct: 799 NIL----VSGHGRVGNKRDSIKLYCE----------MITKGFIPTTGTYNVLIQDYAKAG 844
Query: 361 DMDSIRRLLAQ 371
M R LL +
Sbjct: 845 KMRQARELLNE 855
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 119/314 (37%), Gaps = 74/314 (23%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VPLD N L+ Y + D + G++P+ VTY + L++ +C+ G
Sbjct: 141 VPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTY------NTLVNAFCKRG 194
Query: 139 NIEGA----TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
++ A +IL F RD GV N G+ T L+P+
Sbjct: 195 DLAKAESVVNEILGFRRDD----ESGVLNDC--------------GVETWDGLRDLQPTV 236
Query: 195 QTYTKLMCGYAKHGDMDS---------IKTKIPSLKPQSELF--LCFSFQLTNLLILVSS 243
T+T L+ Y KH +D + +P + S + LC +LT
Sbjct: 237 VTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLT-------- 288
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII 303
A +L M GL+P+ +YT ++ K G V +V G +D++
Sbjct: 289 ---EAAMLLREMYNMGLDPNHVSYTTIISALLKSG---RVMEAFNHQSQMVVRGISIDLV 342
Query: 304 ------HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
L +G + +E+ + +N L P+ TYT L+ G+
Sbjct: 343 LCTTMMDGLFKAGKSKEAEEMFQTILKLN---------------LVPNCVTYTALLDGHC 387
Query: 358 KHGDMDSIRRLLAQ 371
K GD++ +L +
Sbjct: 388 KVGDVEFAETVLQK 401
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 96/240 (40%), Gaps = 44/240 (18%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+ YCQ G ++ A I+ + P+ N L+ G+ + ++ A ++ + G
Sbjct: 116 LVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG 175
Query: 190 LEPSAQTYTKLMCGYAKHGDM---DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
++P TY L+ + K GD+ +S+ +I + E S +
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDE-----------------SGVL 218
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
+ G+ T L+P+ T+T L+ Y KH +D D+ + +
Sbjct: 219 NDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGID----------------DFFSLYEQM 262
Query: 307 AVSGHGEYIDEVSAIVCFVNICFH--WLEGPM----MSQAGLEPSAQTYTKLMCGYAKHG 360
+SG + S+I+ +C H E M M GL+P+ +YT ++ K G
Sbjct: 263 IMSGVMPDVVTCSSIL--YGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSG 320
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 85/212 (40%), Gaps = 9/212 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ +++++ Y + L K+ I PN Y + L+ Y + G E
Sbjct: 410 NVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVY------AILLDGYFRTGQHE 463
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M+ + +F+ L+ ++ M A+ ++ + G+ Y+ LM
Sbjct: 464 AAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLM 523
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMASAEGILTMMSQAGL 260
GY K G+ + + + + + F ++ LT L+ + + + + M + GL
Sbjct: 524 DGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGK--YEPKSVFSRMIELGL 581
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
P TY +M Y G ++ LL + S
Sbjct: 582 TPDCVTYNSVMNTYFIQGKTENALDLLNEMKS 613
Score = 42.0 bits (97), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 62/143 (43%), Gaps = 3/143 (2%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+ AL+ GH + D+ AE +L M + + P+ T++ ++ GYAK G ++ + +
Sbjct: 379 YTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMV 438
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
+ + F + + + +A G M GLE + + L+ + G M
Sbjct: 439 QMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMK 498
Query: 282 SVRRLLAQSGSSLVNGDYLDIIH 304
+ L+ L G YLD+ +
Sbjct: 499 EAQSLIKD---ILSKGIYLDVFN 518
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 6/174 (3%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ + G++PN V+Y + +IS + G + A M + I +
Sbjct: 293 LLREMYNMGLDPNHVSY------TTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTT 346
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
++ G +A AE + + + L P+ TYT L+ G+ K GD++ +T + ++ +
Sbjct: 347 MMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEH 406
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
L +F + A +L M Q + P+ Y L+ GY + G
Sbjct: 407 VLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTG 460
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 39/206 (18%)
Query: 114 IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF------NALIY 167
++P VT+ + LI+ YC+ I+ + E M I GV ++++Y
Sbjct: 232 LQPTVVTW------TTLIAAYCKHRGIDDFFSLYEQM------IMSGVMPDVVTCSSILY 279
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD-MDSI--KTKIPSLKPQS 224
G + + A +L M GL+P+ +YT ++ K G M++ ++++
Sbjct: 280 GLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISI 339
Query: 225 ELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+L LC T ++ + + AE + + + L P+ TYT L+ G+ K GD++
Sbjct: 340 DLVLC-----TTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEF 394
Query: 283 VRRLLAQ-----------SGSSLVNG 297
+L + + SS++NG
Sbjct: 395 AETVLQKMEKEHVLPNVVTFSSIING 420
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 114/290 (39%), Gaps = 32/290 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN ++ + D L ++E EPN TY L+ C++G +E
Sbjct: 9 DIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTY------CILMDGLCKEGRVE 62
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M+ K + V++ LI G + + + M + G+ P+ Y+ L+
Sbjct: 63 EAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLI 122
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
G+ K G + ++ +P + C L A + +M+
Sbjct: 123 NGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCK-----DGRARKALDLFDLMT 177
Query: 257 QAGLEPSAQTYTKLMCGYAKH---GDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
+ G EPS TY L+ G K GD + + + G L Y +I L +G
Sbjct: 178 EKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGK-- 235
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
+DE A+ F ++ + +EP T+ ++ G K G +D
Sbjct: 236 -LDE--AMKLFSSL--------LEDGNYVEPDVITFNTVIQGLCKEGRLD 274
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 149/377 (39%), Gaps = 44/377 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y ++ + D + +G EP+ VTY LI+ C++G I
Sbjct: 149 DVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLING------LCKEGCIG 202
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG--LEPSAQTYTK 199
A KI E M +K + +N LI G + A + + + + G +EP T+
Sbjct: 203 DAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNT 262
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
++ G K G +D ++ + F+ + + S + A + + + G
Sbjct: 263 VIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLG 322
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYID 316
L PS+ TY+ ++ G+ K ++ + L ++ SG S DY ++ +L E
Sbjct: 323 LVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQAR 382
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL---AQNG 373
+ F M ++ EP ++ ++ G K GD+ S + LL Q G
Sbjct: 383 RL----------FQE-----MKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMG 427
Query: 374 SSLVNGDYLDIIHALAVSGH-----GEYIDEIISKIQPGVGYSADAANHIYHLINK--GQ 426
+ Y I+ L+ G G + I S I P NH+Y + K G
Sbjct: 428 LTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPD--------NHVYDSLIKGFGL 479
Query: 427 IDAAYRIVNTLARSANI 443
D ++N L + A++
Sbjct: 480 NDEIEEVINLLRQMADM 496
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 128/336 (38%), Gaps = 57/336 (16%)
Query: 54 CSEPSLGPGNLPCEDPFSVHTGELDV--PLDISHYNALLRVYLDNEHTFSPTDFLAKLES 111
C E +G D F + L+ L++ YN L+ +N + L
Sbjct: 196 CKEGCIG-------DAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLE 248
Query: 112 QG--IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
G +EP+ +T+ +I C++G ++ A +I + M I G F L H
Sbjct: 249 DGNYVEPDVITFNTVIQG------LCKEGRLDKAVEIYDTM------IERGSFGNLFTCH 296
Query: 170 S------QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK-----TKIP 218
++ + A + + + GL PS+ TY+ ++ G+ K ++ K KI
Sbjct: 297 ILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKIS 356
Query: 219 SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
L P F + + S + A + M ++ EP ++ ++ G K G
Sbjct: 357 GLSPT-----LFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAG 411
Query: 279 DMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
D+ S + LL Q G + Y I+ L+ G ++E
Sbjct: 412 DIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQ---MEEAKGAF------------D 456
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M +G+ P Y L+ G+ + +++ + LL Q
Sbjct: 457 SMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQ 492
Score = 46.6 bits (109), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 89/410 (21%), Positives = 152/410 (37%), Gaps = 62/410 (15%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+N +I G + + A +L M + EP++ TY LM G K G ++ + +K
Sbjct: 13 YNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMK 72
Query: 222 PQS-EL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG- 278
+ E+ + +S ++ D A + M + G+ P+ Y+ L+ G+ K G
Sbjct: 73 RKGLEVDVVVYSTLISGFCSKGCLDRGKA--LFDEMLEKGISPNVVVYSCLINGFCKKGL 130
Query: 279 --DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM 336
+ +V + + G Y +I L G A+ F +
Sbjct: 131 WREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRAR-----KALDLF----------DL 175
Query: 337 MSQAGLEPSAQTYTKLMCGYAKH---GDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
M++ G EPS TY L+ G K GD I + + G L Y +I L +G
Sbjct: 176 MTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGK 235
Query: 394 -GEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSANINGEQLP 449
E + S ++ G D I L +G++D A I +T+ E+
Sbjct: 236 LDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMI-------ERGS 288
Query: 450 VGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAA---YRIVNTLARSANINGEQL 506
G H++ I I G ID A ++ V+ L + +
Sbjct: 289 FGNLFTCHIL----------------IGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSV 332
Query: 507 PVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKE 556
+ GF HM+ + + R+ L P F+ L+ A + KE
Sbjct: 333 MIDGFCKMHMLNFAK------GLFSRMKISGLSPTLFDYNTLM-ASLCKE 375
>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 133/310 (42%), Gaps = 37/310 (11%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
++ + PN VT+ + LI YC+ G++E A + + MR ++ + ALI G
Sbjct: 189 MKRDALSPNVVTF------TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDG 242
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
+ +M AE + + M + +EP++ YT ++ G+ + GD D+ + + Q
Sbjct: 243 FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQG---- 298
Query: 229 CFSFQLTNLLILVS-----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+T +++S + A I+ M ++ L P +T +M Y K G M +
Sbjct: 299 -MRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA 357
Query: 284 RRL---LAQSG--------SSLVNGDYLD-IIHALAVSGHGEYIDEVSAIVCFVNIC--- 328
+ L + G S++++G + +H V E ++V V +C
Sbjct: 358 VNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEG 417
Query: 329 -FHWLEG--PMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSSLVNGDYL 382
F +E +S+AGL P YT + G K G D ++ + Q G L Y
Sbjct: 418 DFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYT 477
Query: 383 DIIHALAVSG 392
+I+ LA G
Sbjct: 478 TLIYGLASKG 487
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 113/291 (38%), Gaps = 37/291 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y ++ + + + FLAK+ +QG+ + Y +IS C +G ++ AT+
Sbjct: 271 YTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISG------LCGNGKLKEATE 324
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I+E M +F ++ + ++ M +A + + + G EP + ++ G A
Sbjct: 325 IVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIA 384
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K+G + K ++ L D E + + +S+AGL P
Sbjct: 385 KNGQLHEAIVYFCIEKANDVMYTVLIDALCK-----EGDFIEVERLFSKISEAGLVPDKF 439
Query: 266 TYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSG----HGEYIDEV 318
YT + G K G++ +L + Q G L Y +I+ LA G + DE
Sbjct: 440 MYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDE- 498
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
M +G+ P + + L+ Y K G+M + LL
Sbjct: 499 ------------------MLNSGISPDSAVFDLLIRAYEKEGNMAAASDLL 531
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 120/313 (38%), Gaps = 68/313 (21%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
PN VTY S I +C+ G ++ A K M+ + F LI G+ +A D+
Sbjct: 161 PNVVTY------STWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDL 214
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT 235
A + M + + + TYT L+ G+ K G+M
Sbjct: 215 EVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQ------------------------ 250
Query: 236 NLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGS 292
AE + + M + +EP++ YT ++ G+ + GD D+ + LA+ G
Sbjct: 251 -----------RAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Query: 293 SLVNGDYLDIIHALAVSGH----------GEYIDEVSAIVCFVNICFHWLEGPMMSQA-- 340
L Y II L +G E D V +V F + + + M A
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359
Query: 341 --------GLEPSAQTYTKLMCGYAKHGDM-DSIRRLLAQNGSSLVNGDYLDIIHALAVS 391
G EP + ++ G AK+G + ++I + + ++ Y +I AL
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM---YTVLIDALCKE 416
Query: 392 GHGEYIDEIISKI 404
G ++ + SKI
Sbjct: 417 GDFIEVERLFSKI 429
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 140/345 (40%), Gaps = 66/345 (19%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL++L P+ T + I +LI+ C G + + K L ++ + + FN+
Sbjct: 8 FLSRLRKSSNLPDPFTCNKHIH--QLINSNC--GIL--SLKFLAYLVSRGYTPHRSSFNS 61
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
++ + + AE I+ M + G EP +Y L+ G+ ++GD+ S + SL+ S
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA-S 120
Query: 225 ELFLC-------------FS--------FQLTNLLILVSS----------DMASAEGILT 253
F+C FS F +++ S D G L
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 254 M-------MSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDII 303
+ M + L P+ T+T L+ GY K GD++ S+ + + + SL Y +I
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
G + +E+ + M + +EP++ YT ++ G+ + GD D
Sbjct: 241 DGFCKKGEMQRAEEMYS---------------RMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Query: 364 SIRRLLAQ---NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
+ + LA+ G L Y II L +G + EI+ ++
Sbjct: 286 NAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDME 330
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 94/213 (44%), Gaps = 17/213 (7%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D+ D+ + ++ Y + + + KL +G EP+ +++ S +I ++
Sbjct: 333 DLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPD------VVALSTMIDGIAKN 386
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G + A I+ F +K ++ ++ LI + D E + + +S+AGL P Y
Sbjct: 387 GQLHEA--IVYFCIEKA---NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMY 441
Query: 198 TKLMCGYAKHGDM-DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD--MASAEGILTM 254
T + G K G++ D+ K K ++ E L T L+ ++S M A +
Sbjct: 442 TSWIAGLCKQGNLVDAFKLKTRMVQ---EGLLLDLLAYTTLIYGLASKGLMVEARQVFDE 498
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
M +G+ P + + L+ Y K G+M + LL
Sbjct: 499 MLNSGISPDSAVFDLLIRAYEKEGNMAAASDLL 531
>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
Length = 871
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 129/297 (43%), Gaps = 32/297 (10%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
P+R+TY S L+S C++G + A K L M K +++ I+G+ +
Sbjct: 517 PDRITY------STLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKT 570
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT 235
+ A +L M + G +PS +TY L+ G+ + + D I I +K + +C +
Sbjct: 571 SLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKG---ICPNVMTY 627
Query: 236 NLLILVSSDMA---SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
N LI + A +L M Q + P+ ++ L+ + K D + +R+ S S
Sbjct: 628 NSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLS 687
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAI--VCFVNICFHWLEGPMMSQAGLEPSAQTYT 350
+ + L + +S +G +++ ++ + V + I H Y
Sbjct: 688 TCGQKEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRF---------------PYK 732
Query: 351 KLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI 404
+++ G K ++D + +LL G S ++ +I AL+ G +++D + K+
Sbjct: 733 QIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSERGKKQHVDMLSQKM 789
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 110/534 (20%), Positives = 211/534 (39%), Gaps = 51/534 (9%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+++ G+ + T ++ N+ +++ +C++G ++ A +++E MRD+ + FNA I
Sbjct: 198 MDALGVLDSMPTMNLVVCNT-VVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISA 256
Query: 169 HSQANDMASAEGILTMMSQA---GL-EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+A + A I M + GL P T+ ++ G+ + G +D + + ++
Sbjct: 257 LCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGG 316
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
L S+ ++ + + A+ +L M+ G++P++ TY ++ G K G VR
Sbjct: 317 FLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVR 376
Query: 285 RLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
++ S ++ D Y ++HA G+ + + M+Q G
Sbjct: 377 KVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRIL---------------DEMAQKG 421
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLL---AQNGSSLVNGDYLDIIHALAVSGHGEYID 398
P++ TY L+ K G + RLL ++ G SL II L + +
Sbjct: 422 CAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAM 481
Query: 399 EIISKIQP-------GVGYSADAANHIYHLINKGQIDAAYRIV-NTLARSANINGEQLPV 450
+I+ + +GYS + + D RI +TL + G
Sbjct: 482 DIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPD---RITYSTLVSALCKEGRFDEA 538
Query: 451 GGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSA---NINGEQLP 507
L+ + K P S I+ G+ A +++ + + + L
Sbjct: 539 KKKLLEMIGKDISPD---SVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLL 595
Query: 508 VGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETF-E 566
+ GF +H D++L + + + + P LIK+ + A+ E
Sbjct: 596 IWGFREKH------NSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDE 649
Query: 567 YCVNQFRATPWKGELL-KRFIQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFL 619
N+ ELL K F + D + QR+ D S S G+ LY LM + L
Sbjct: 650 MLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQKEVLYSLMCTQL 703
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/350 (20%), Positives = 131/350 (37%), Gaps = 57/350 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y +LL Y + + L ++ +G PN TY L+ + + G I
Sbjct: 390 DVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQS------LWKAGRIT 443
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG------------ 189
A ++LE M +K + + N +I G + N + A I+ M G
Sbjct: 444 EAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFL 503
Query: 190 -----------LEPSAQTYTKLMCGYAKHGDMDSIKTKI-----PSLKPQSELFLCFSFQ 233
P TY+ L+ K G D K K+ + P S L+ F
Sbjct: 504 SLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHG 563
Query: 234 LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGS 292
+ A +L M + G +PS +TY L+ G+ + + D + +L+++ G
Sbjct: 564 YCK-----HGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGK 618
Query: 293 SLVNG--DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYT 350
+ Y +I + G VN L+ M Q + P+ ++
Sbjct: 619 GICPNVMTYNSLIKSFCERG-------------MVNKAMPLLDE--MLQNEIVPNITSFE 663
Query: 351 KLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEI 400
L+ + K D + +R+ + S+ + L + +S +G +++ +
Sbjct: 664 LLIKAFCKTSDFSAAQRVFDASLSTCGQKEVLYSLMCTQLSTYGRWLEAM 713
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/314 (18%), Positives = 123/314 (39%), Gaps = 45/314 (14%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ YN L + N + L ++ +G++PN TY ++ C++G
Sbjct: 321 VESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDG------LCKEGKAFD 374
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
K+ +F++ + +L++ + + A+A IL M+Q G P++ TY L+
Sbjct: 375 VRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQ 434
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELF-----------LCFSFQLTNLLILVSSDMASAEGI 251
K G + + + + + LC + +L + +V D EG
Sbjct: 435 SLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIV--DGMWNEGS 492
Query: 252 LTM--------------MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG 297
L + S P TY+ L+ K G D ++ L + ++
Sbjct: 493 LALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISP 552
Query: 298 DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
D +++ + G+ ++ A+ + M + G +PS +TY L+ G+
Sbjct: 553 D--SVLYDTFIHGYCKHGKTSLAVKVLRD----------MEKKGCKPSTRTYNLLIWGFR 600
Query: 358 KHGDMDSIRRLLAQ 371
+ + D I +L+++
Sbjct: 601 EKHNSDEILKLISE 614
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 94 LDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDK 153
LD F+ D K E P++VT+ ++S +C+ G ++ A +++ MR
Sbjct: 264 LDAYRIFN--DMQEKWERGLPRPDQVTFDVMLSG------FCEAGMVDEARVLVDIMRCG 315
Query: 154 TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---DM 210
F +N + G + + A+ +L M+ G++P++ TY ++ G K G D+
Sbjct: 316 GFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDV 375
Query: 211 DSIKTKIPS--LKPQSELFLCFSFQLTNLLILVSSD--MASAEGILTMMSQAGLEPSAQT 266
++ + S + P + T+LL S+ A+A IL M+Q G P++ T
Sbjct: 376 RKVEDFVKSGVMTPDVVTY-------TSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFT 428
Query: 267 YTKLMCGYAKHGDMDSVRRLL---AQSGSSL 294
Y L+ K G + RLL ++ G SL
Sbjct: 429 YNVLLQSLWKAGRITEAERLLERMSEKGYSL 459
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 29/229 (12%)
Query: 59 LGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTF-SPTDFLAKLESQGIEPN 117
+G L F + E+ +P ++ N L++ N T + ++ ++G P+
Sbjct: 131 VGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPD 190
Query: 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS 177
TY LI+ C+ G I A ++ + M K + + +LI+G Q+ D+ S
Sbjct: 191 SYTYGTLING------LCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDS 244
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---------DMDSIKTKIPSLKPQSELF- 227
A +L M+ G++P+ TY+ LM G+ K G DM + +P++ S L
Sbjct: 245 AIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVH 304
Query: 228 -LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
LC +L A IL M GL P A Y K++ G+
Sbjct: 305 GLCKEGKLQE-----------AVEILDRMKLQGLRPDAGLYGKIISGFC 342
>gi|218192673|gb|EEC75100.1| hypothetical protein OsI_11265 [Oryza sativa Indica Group]
Length = 588
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 16/228 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ N +L ++ + S + K GIEP T + LI Y + +
Sbjct: 288 DVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTL------NILIGAYGKKRMYD 341
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ ++E+MR FP + FN +I + A D + E M G++P +T+ L+
Sbjct: 342 KMSAVMEYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLI 401
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQA 258
G+ G + + +K L + N +++ + D+ E + M Q
Sbjct: 402 NGFGNAGLFHKV---VGMVKLAERLGVPMDTTFHNAVLMACVKAEDLMEMERVFMRMKQI 458
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
P A TY+ L+ Y K G D + +L Q +LV D++H L
Sbjct: 459 QCVPDATTYSILVGAYRKEGMTDKI-YVLQQENPTLVP---TDLVHYL 502
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/277 (18%), Positives = 116/277 (41%), Gaps = 26/277 (9%)
Query: 139 NIEGATKILEFMRDKTF--PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
N + A ++ + ++++ F P EG F L+ ++ + A + M Q G +P+ +
Sbjct: 126 NWQEALQVFQMLKEQPFYHP-KEGTFMKLLLLLGRSGQPSRARYLFDEMLQQGCQPTPEL 184
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC----FSFQLTNLLILVSSDMASAEGIL 252
YT L+ Y ++G +D + +K +C +++ + +S + +
Sbjct: 185 YTALIAAYCRNGLLDDAFRLLADMKASP---VCQPDVYTYSTIIKACVDASRFDIVDAMY 241
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL-AQSGSSLVNGDYLDIIHALAVSGH 311
M+ + P+ T ++ GY + G +D + ++L A S+ D + L++ G+
Sbjct: 242 KDMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTMNIILSLFGN 301
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK---HGDMDSIRRL 368
I+ + W E G+EP +T L+ Y K + M ++
Sbjct: 302 RGQIESME----------KWYEK--FRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEY 349
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
+ + + ++I A A +G + ++ ++++
Sbjct: 350 MRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMR 386
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 116/309 (37%), Gaps = 25/309 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAK-LESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ Y+ +++ +D F D + K + + I PN VT Q ++ +S Y + G +
Sbjct: 217 DVYTYSTIIKACVDASR-FDIVDAMYKDMADRSIAPNTVT-QNIV-----LSGYGRAGRL 269
Query: 141 EGATKILEFMRDKTFPISE-GVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ K+L M D T + N ++ + S E G+EP +T
Sbjct: 270 DDMEKVLSAMLDSTTSKPDVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTLNI 329
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L+ Y K D + + ++ + + +F + D + E M G
Sbjct: 330 LIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEG 389
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
++P +T+ L+ G+ G V ++ + V D L E + E+
Sbjct: 390 MKPDTKTFCCLINGFGNAGLFHKVVGMVKLAERLGVPMDTTFHNAVLMACVKAEDLMEME 449
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG 379
+ M Q P A TY+ L+ Y K G D I +L Q +LV
Sbjct: 450 RVFM------------RMKQIQCVPDATTYSILVGAYRKEGMTDKI-YVLQQENPTLVP- 495
Query: 380 DYLDIIHAL 388
D++H L
Sbjct: 496 --TDLVHYL 502
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 114/513 (22%), Positives = 198/513 (38%), Gaps = 59/513 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E V +I +N+LL L ++E G P+ TY L L+ C
Sbjct: 274 EKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDG--LLR--C 329
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
DGN GA ++ E +K I+ + L+ G + + AE IL ++ GL
Sbjct: 330 DDGN--GAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEV 387
Query: 196 TYTKLMCGYAKHGDMDSIKTKIP-----SLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
Y + GY + GDM+ I L+P S F + ++ +M AE
Sbjct: 388 IYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDM-----KEMDKAEE 442
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALA 307
+ M++ G+ PS +TY L+ GY K D ++L Q V + Y +I+ L
Sbjct: 443 WVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLC 502
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
G I E + IV IC G+ P+AQ Y L+ G G + R
Sbjct: 503 KDGK---ILE-AEIVLRDMIC-----------RGVLPNAQVYNMLIDGSCMVGKVKDALR 547
Query: 368 LLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHL 421
+ S ++ Y +I L G ++ +++I G+S D + I
Sbjct: 548 FFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSS-GHSPDVITYNSLISGY 606
Query: 422 INKGQIDAAYRIVNTL--------ARS-----ANINGEQLPVGGFLVRHMVKTNQPGVGY 468
N G + + T+ R+ + + E + + L M++ N
Sbjct: 607 ANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRV 666
Query: 469 SADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLA 528
+A H Y I G AY + + I+ +++ ++ H + + +
Sbjct: 667 VYNAMIHCYAEI--GNTQKAYSLHQGMLDQG-IHPDKMTYNSLILGHFREG--KLSNIKD 721
Query: 529 VCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGA 561
+ + + + L P+A +L+K H +D++GA
Sbjct: 722 LVNNMKAKELAPKADTYDILVKGHCDLKDFSGA 754
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 110/303 (36%), Gaps = 53/303 (17%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISN-----------------------------SKLISKY 134
+FL + +G+ PN Y LI + LI Y
Sbjct: 197 EFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGY 256
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C+ G ++ A K+ E M++K+ + FN+L+ G + M A +L M G P
Sbjct: 257 CKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDG 316
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY+ L G + D + + ++ + + + AE IL
Sbjct: 317 YTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKK 376
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMD----SVRRL--LAQSGSSLVNGDYLDIIHALAV 308
++ GL Y + GY + GDM+ ++ R+ +S+ +D +
Sbjct: 377 FTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKE 436
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
E W++ M++ G+ PS +TY L+ GY K D ++
Sbjct: 437 MDKAE----------------EWVKK--MAEKGVTPSVETYNTLIDGYGKLCTFDRCFQI 478
Query: 369 LAQ 371
L Q
Sbjct: 479 LEQ 481
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 106/277 (38%), Gaps = 35/277 (12%)
Query: 96 NEHTF-SPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT 154
NE F D ++E+ G + Y +K I + N++ + L+ MR +
Sbjct: 153 NEKQFVKVVDLFMEIENSGFRTDTFMY------AKAIQAAVKLQNLKMGMEFLDSMRKRG 206
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI- 213
+ ++N LI G + + AE + M L S TY L+ GY K G++D+
Sbjct: 207 VRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAF 266
Query: 214 ----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTK 269
+ K S+ P + F+ L+ L + M A +L M G P TY+
Sbjct: 267 KMRERMKEKSVAPN---IITFNSLLSGLCKM--RKMKEARSLLKEMEVNGFMPDGYTYSI 321
Query: 270 LMCGYAKHGDMDSVRRLLAQS---GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVN 326
L G + D + L Q+ G + N +++ L G E +E+
Sbjct: 322 LFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILK------ 375
Query: 327 ICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
++ GL Y + GY + GDM+
Sbjct: 376 ---------KFTENGLVADEVIYNTFVNGYCRIGDMN 403
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 86/211 (40%), Gaps = 13/211 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN+L+ Y + + +++ GI+P TY LIS C IE
Sbjct: 595 DVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG-------CSKEGIE 647
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
K+ M V+NA+I+ +++ + A + M G+ P TY L+
Sbjct: 648 LVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLI 707
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MSQA 258
G+ + G + +IK + ++K + L ++L+ D+ G M +
Sbjct: 708 LGHFREGKLSNIKDLVNNMKAKE---LAPKADTYDILVKGHCDLKDFSGAYVWYREMVEN 764
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P+A +L G + G + V+ + ++
Sbjct: 765 NFLPNASICNELTAGLEQEGRLQEVQVICSE 795
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 129/305 (42%), Gaps = 43/305 (14%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS ++ LM GY K GD++
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQASGVQPDVY-TYSVLINGL--CKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDY 381
M GL+P TYT L+ G K GD+++ R+ + + L + Y
Sbjct: 302 ------------MIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAY 349
Query: 382 LDIIHALAVSGHG----EYIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
+I L G + + E++S ++P +G N KG + +++
Sbjct: 350 TALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIIN---EFCKKGDVWXGSKLLKE 406
Query: 437 LARSA 441
+ R
Sbjct: 407 MQRDG 411
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+ PN VT+ + LI +C++G ++ A +I + M ++ +N LIYG +
Sbjct: 235 KGLVPNGVTF------TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-IKTKIPSLKPQSEL-FLC 229
D+ A+ ++ M GL+P TYT L+ G K GD+++ + + +K L +
Sbjct: 289 KGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
++ ++ L S AE +L M GL+P TYT ++ + K GD+ +LL +
Sbjct: 349 YTALISGLCQEGRS--VDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKE 406
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 118/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
GL+P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 IMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKE 406
>gi|224068256|ref|XP_002302689.1| predicted protein [Populus trichocarpa]
gi|222844415|gb|EEE81962.1| predicted protein [Populus trichocarpa]
Length = 640
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 8/217 (3%)
Query: 71 SVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKL 130
S+ +G LD P D+ YN+L+ V +L+ G EP+ TY+ LI
Sbjct: 110 SLASGSLD-P-DLCTYNSLIHVLCLAGKVKDAVIVYEELKVSGHEPDAFTYRILIQGC-- 165
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
C+ +E ATKI M+ F V+N+L+ G +A + A + M Q G+
Sbjct: 166 ----CKSYQMEDATKIFSEMQYNGFLPDTVVYNSLLDGMFKARKVMEACQLFEKMVQDGV 221
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
S TY L+ G K+G ++ LK + + ++ + LL+ + A
Sbjct: 222 RASCWTYNILIDGLCKNGRAEAGYNLFCGLKKKGQFVDAVTYSIVVLLLCRKGHLEEALH 281
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
++ M + G T T L+ + K G D RL+
Sbjct: 282 LVEEMEERGFVVDLITITSLLIAFHKQGRWDCTERLM 318
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 119/299 (39%), Gaps = 44/299 (14%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQG-IEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
NALL + E AKL +G E N Y + I + G++ + +
Sbjct: 48 NALLVALRNGEMKVEFKTVFAKLRGKGGFELNTWGY------NICIHAFGCWGDLTTSLR 101
Query: 146 ILEFMRDKTFPISE-----GVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ + M++K+ +N+LI+ A + A + + +G EP A TY L
Sbjct: 102 LFKEMKEKSLASGSLDPDLCTYNSLIHVLCLAGKVKDAVIVYEELKVSGHEPDAFTYRIL 161
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQA 258
+ G K M+ TKI S + Q FL + +LL + + + A + M Q
Sbjct: 162 IQGCCKSYQMED-ATKIFS-EMQYNGFLPDTVVYNSLLDGMFKARKVMEACQLFEKMVQD 219
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
G+ S TY L+ G K+G A++G +L G + G+++D V
Sbjct: 220 GVRASCWTYNILIDGLCKNGR--------AEAGYNLFCG----------LKKKGQFVDAV 261
Query: 319 SAIVCFVNIC--------FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ + + +C H +E M + G T T L+ + K G D RL+
Sbjct: 262 TYSIVVLLLCRKGHLEEALHLVEE--MEERGFVVDLITITSLLIAFHKQGRWDCTERLM 318
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 111/271 (40%), Gaps = 34/271 (12%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+ GI PN Y LIS +YC DG ++ A K+ MR+K +N LI G
Sbjct: 254 MNRSGIVPNAYAYNCLIS------EYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGG 307
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
+ A ++ +++ GL P+ TY L+ G+ G MD+ LK L
Sbjct: 308 LCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSG---L 364
Query: 229 CFSFQLTNLLILVSSDMASAEGILTM---MSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 282
+ N LI S + + G L + M + + S TYT L+ +A+ D
Sbjct: 365 SPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACE 424
Query: 283 VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS--QA 340
+ L+ +SG Y +IH V+G+ + E S P S +
Sbjct: 425 MHSLMEKSGLVPDVYTYSVLIHGXCVNGN---MKEASK--------------PFKSLGEM 467
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
L+P++ Y ++ GY K G RLL +
Sbjct: 468 HLQPNSVIYNTMIHGYCKEGSSYRALRLLNE 498
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 8/215 (3%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + + YN L+ + + K+ G+ PN VTY LI+ +C
Sbjct: 291 EKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILING------FC 344
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G ++ A ++ ++ + +N LI G+S+ ++A A ++ M + + S
Sbjct: 345 DVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKV 404
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL-CFSFQLTNLLILVSSDMASAEGILTM 254
TYT L+ +A+ D ++ SL +S L +++ + V+ +M A
Sbjct: 405 TYTILIDAFARLNYTDK-ACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKS 463
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ + L+P++ Y ++ GY K G RLL +
Sbjct: 464 LGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNE 498
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 41/221 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN L+ + D + +L+S G+ P VTY LI+ Y + N+
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAG------YSKVENLA 385
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA +++ M ++ S+ + LI ++ N A + ++M ++GL P TY+ L+
Sbjct: 386 GALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLI 445
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELF------LC--------------------- 229
G +G+M SL +P S ++ C
Sbjct: 446 HGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMV 505
Query: 230 ---FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTY 267
SF T L+ AE +L M +GL+PS Y
Sbjct: 506 PNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546
Score = 42.7 bits (99), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 116/295 (39%), Gaps = 30/295 (10%)
Query: 156 PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKT 215
P+ + + NA Y HS + D A L M G P + T+ L+C + D
Sbjct: 90 PLYDAIVNA--YVHSHSTDQALT--FLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWW 145
Query: 216 KIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
LK + L +SF + + +L ++ + GL P+ YT L+ G
Sbjct: 146 IFNVLKSKVVLN-AYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCC 204
Query: 276 KHGDMDSVRRLLAQSGSSLVNGDYLDII---HALAVSGHGEYIDEVSAIVCFVNICFHWL 332
K+GD+ + L + D L ++ H +V +G + + F
Sbjct: 205 KNGDVMLAKNLFCKM-------DRLGLVPNQHTYSVLMNGFFKQGLQ------REGFQMY 251
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSSLVNGDYLDIIHALA 389
E M+++G+ P+A Y L+ Y G +D ++ A + G + Y +I L
Sbjct: 252 EN--MNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLC 309
Query: 390 VSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSA 441
+++ K+ VG S + + I + G++D A R+ N L S
Sbjct: 310 RGKKFGEAVKLVHKVNK-VGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSG 363
>gi|224100125|ref|XP_002334407.1| predicted protein [Populus trichocarpa]
gi|222872045|gb|EEF09176.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 8/217 (3%)
Query: 71 SVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKL 130
S+ +G LD P D+ YN+L+ V +L+ G EP+ TY+ LI
Sbjct: 246 SLASGSLD-P-DLCTYNSLIHVLCLAGKVKDAVIVYEELKVSGHEPDAFTYRILIQGC-- 301
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
C+ +E +TKI M+ F V+N+L+ G +A + A + M Q G+
Sbjct: 302 ----CKSYQMEDSTKIFSEMQYNGFLPDTVVYNSLLDGMFKARKVMEACQLFEKMVQDGV 357
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
S TY L+ G K+G ++ LK + + ++ + LL+ + A
Sbjct: 358 RASCWTYNILIDGLCKNGRAEAGYNLFCGLKKKGQFVDAVTYSIVVLLLCRKGHLEDALH 417
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
++ M + G T T L+ + K G D RL+
Sbjct: 418 LVEEMEERGFVVDLITITSLLIAFHKQGRWDCTERLM 454
Score = 47.0 bits (110), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 119/299 (39%), Gaps = 44/299 (14%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQ-GIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
NALL + E AKL + G E N Y + I + G++ + +
Sbjct: 184 NALLVALRNGEMKVEFKTVFAKLRGKVGFELNTWGY------NICIHAFGCWGDLTTSLR 237
Query: 146 ILEFMRDKTFPISE-----GVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ + M++K+ +N+LI+ A + A + + +G EP A TY L
Sbjct: 238 LFKEMKEKSLASGSLDPDLCTYNSLIHVLCLAGKVKDAVIVYEELKVSGHEPDAFTYRIL 297
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQA 258
+ G K M+ TKI S + Q FL + +LL + + + A + M Q
Sbjct: 298 IQGCCKSYQMED-STKIFS-EMQYNGFLPDTVVYNSLLDGMFKARKVMEACQLFEKMVQD 355
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
G+ S TY L+ G K+G A++G +L G + G+++D V
Sbjct: 356 GVRASCWTYNILIDGLCKNGR--------AEAGYNLFCG----------LKKKGQFVDAV 397
Query: 319 SAIVCFVNIC--------FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ + + +C H +E M + G T T L+ + K G D RL+
Sbjct: 398 TYSIVVLLLCRKGHLEDALHLVEE--MEERGFVVDLITITSLLIAFHKQGRWDCTERLM 454
Score = 40.8 bits (94), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 75/354 (21%), Positives = 135/354 (38%), Gaps = 46/354 (12%)
Query: 118 RVTYQQLISN-SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
R Y+ +S S++ S C+ G +E +L M++ + F L+ ++
Sbjct: 58 RHIYKHSVSTYSQMFSTLCRSGYLEEVPDLLNSMKNDGVVVGSETFKLLLDAFIRSGKFD 117
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSE-----LFL 228
SA IL M + G P+ Y ++ AK + SI K+ +E + L
Sbjct: 118 SALDILDHMEELGSNPNPHMYDSIIVALAKKNQVGLALSIMFKLLEASDGNEENAVGVSL 177
Query: 229 CFSFQLTNLLILVSSDMASAEG---ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
S LL+ + + E + + G E + Y + + GD+ + R
Sbjct: 178 PGSVACNALLVALRNGEMKVEFKTVFAKLRGKVGFELNTWGYNICIHAFGCWGDLTTSLR 237
Query: 286 LLAQ-SGSSLVNGD-------YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
L + SL +G Y +IH L ++G + A++ + +
Sbjct: 238 LFKEMKEKSLASGSLDPDLCTYNSLIHVLCLAGKVK-----DAVIVYEE----------L 282
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NG---SSLVNGDYLD-IIHALAV 390
+G EP A TY L+ G K M+ ++ ++ NG ++V LD + A V
Sbjct: 283 KVSGHEPDAFTYRILIQGCCKSYQMEDSTKIFSEMQYNGFLPDTVVYNSLLDGMFKARKV 342
Query: 391 SGHGEYIDEIISKIQPGVGYSADAAN-HIYHLINKGQIDAAYRIVNTLARSANI 443
+ +++ +Q GV S N I L G+ +A Y + L +
Sbjct: 343 MEACQLFEKM---VQDGVRASCWTYNILIDGLCKNGRAEAGYNLFCGLKKKGQF 393
>gi|413948245|gb|AFW80894.1| hypothetical protein ZEAMMB73_865420 [Zea mays]
Length = 573
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 119/319 (37%), Gaps = 57/319 (17%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D +N L+ E FL +LE QG EP+ VTY L++ YC+ G ++
Sbjct: 207 DARTFNILVAALCRGEDAERAYGFLEELEEQGFEPDVVTYNTLLAG------YCRKGRLQ 260
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M + P L+ G +A + A + M GL P A Y+ L+
Sbjct: 261 DALHLFDVMPHRRVPPDLVSHTILMDGLCKAWRLKDARRMFDRMVHGGLRPDAVAYSVLI 320
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL--------------------------- 234
GY G + ++ + + L + F+ ++
Sbjct: 321 TGYCNEGQLKEARSLLMEMAGSGLLDIAFALRVVVQGHVKFGKLLTCLNMVAPLRKYGIV 380
Query: 235 ------TNLLILVSSDMA--SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+ L+ + DM +A G+L M + G PS Q Y ++ + + + +
Sbjct: 381 IPSQSYSCLIGALCEDMRPNAARGLLQWMIEDGHCPSLQMYNMIVDCFCRCDNPKEALDV 440
Query: 287 LAQSGSSLVNGDYLDIIHALAV--SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
+ S V +Y + L + G+ + S +V + FH P
Sbjct: 441 KVEMTSREVKPNY-NTYQTLIICLCRLGKSLSGQSVMVEMIESDFH-------------P 486
Query: 345 SAQTYTKLMCGYAKHGDMD 363
+ T L+CG+ K GD+D
Sbjct: 487 NEAICTALVCGFCKEGDLD 505
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 58/162 (35%), Gaps = 32/162 (19%)
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII 303
D A G L + + G EP TY L+ GY + G + D +
Sbjct: 223 DAERAYGFLEELEEQGFEPDVVTYNTLLAGYCRKGRLQ-------------------DAL 263
Query: 304 HALAVSGHGEYI-DEVSAIVCFVNICFHWLEGPM------MSQAGLEPSAQTYTKLMCGY 356
H V H D VS + +C W M GL P A Y+ L+ GY
Sbjct: 264 HLFDVMPHRRVPPDLVSHTILMDGLCKAWRLKDARRMFDRMVHGGLRPDAVAYSVLITGY 323
Query: 357 AKHGDMDSIRRLLAQNGSSLVNGDYLDIIHAL--AVSGHGEY 396
G + R LL + S LDI AL V GH ++
Sbjct: 324 CNEGQLKEARSLLMEMAGS----GLLDIAFALRVVVQGHVKF 361
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 91/208 (43%), Gaps = 6/208 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I M ++ +N LIYG + D+ A ++ MS GL+P TYT L+
Sbjct: 259 LAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G K GD+++ + ++ ++ + AE +L M GL+
Sbjct: 319 DGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P TYT ++ K GD+ + +LL +
Sbjct: 379 PEIGTYTMIINEXCKKGDVWTGSKLLKE 406
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 36/232 (15%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ GL PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K+ + + +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKSVMQASGVHPDVY-TYSVLINGL--CKESKMDDANELFDEMLBNGLVPNXVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S + D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI----RRLLAQN 372
MS GL+P TYT L+ G K GD+++ +R++ +N
Sbjct: 302 ------------MSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKEN 341
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 118/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ + + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS L ++ + D+ A ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG---HG 312
S GL+P TYT L+ G K GD+++ + + D D+ + +SG G
Sbjct: 303 SMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXD--DVAYTALISGLCQEG 360
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ K GD+ + +LL +
Sbjct: 361 RSVDAEKML-------------REMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKE 406
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 10/224 (4%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNA++ + H + ++ +GI P+ +TY S +I +C+ G A +
Sbjct: 79 YNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITY------SGMIDSFCRSGRWTDAEQ 132
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M ++ F+ALI + ++ AE I M + G+ P+ TY ++ G+
Sbjct: 133 LLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFC 192
Query: 206 KHGDMDSIKTKIPSL--KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
K ++ K + S+ K S + FS + D + I M + G+ +
Sbjct: 193 KQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD--NGMEIFCEMHRRGIVAN 250
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
TYT L+ G+ + GD+D+ + LL SS V +Y+ LA
Sbjct: 251 TVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 113/263 (42%), Gaps = 18/263 (6%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I+ C+ G+ E A +L M + ++NA+I + A+ + T M G
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 190 LEPSAQTYTKLMCGYAKHG---DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
+ P TY+ ++ + + G D + + + + ++ + FS L N L+ ++
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDV-VTFS-ALINALV-KEGKVS 163
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
AE I M + G+ P+ TY ++ G+ K ++ +R+L S + D + +
Sbjct: 164 EAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLI 223
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
+ +D I C M + G+ + TYT L+ G+ + GD+D+ +
Sbjct: 224 NGYCKAKRVDNGMEIFC------------EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 367 RLLAQNGSSLVNGDYLDIIHALA 389
LL SS V +Y+ LA
Sbjct: 272 DLLNVMISSGVAPNYITFQSMLA 294
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ ++AL+ + + + +GI P +TY +I +C+ +
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDG------FCKQDRLN 198
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L+ M K+ F+ LI G+ +A + + I M + G+ + TYT L+
Sbjct: 199 DAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLI 258
Query: 202 CGYAKHGDMDS 212
G+ + GD+D+
Sbjct: 259 HGFCQVGDLDA 269
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 128/309 (41%), Gaps = 24/309 (7%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTF-SPTDFLAKLESQGIEPNRVTYQQLISNS 128
F E +P + N L++ NE T S ++ ++G +P+ TY
Sbjct: 142 FYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTY------G 195
Query: 129 KLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
LI+ C+ G I A ++L+ M +K S + +LI+G Q+N++ A +L M
Sbjct: 196 TLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIIN 255
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMAS 247
G+EP+ TY+ LM G K G + + + L ++ L N L +
Sbjct: 256 GIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREA 315
Query: 248 AEGILTMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSVRRLLAQSGSS--LVNGDYLDI 302
E IL M GL+P A Y ++ +C + + + +A G S + +
Sbjct: 316 VE-ILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVK 374
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+H + V G +D A +++ M G+ T+ L+ + K GD+
Sbjct: 375 MHNMVVQGLCNNVDPTRAFQLYLS----------MRTRGISVEIGTFDCLVKCFCKRGDL 424
Query: 363 DSIRRLLAQ 371
+ R+L +
Sbjct: 425 NKAARILEE 433
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 106/267 (39%), Gaps = 48/267 (17%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK-HGDMDSI 213
F F A+I+ N AEG+L M Q E + + + GY + H +D+I
Sbjct: 46 FRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAI 105
Query: 214 ----KTKIPSLKPQSELFLCFSFQLTNLLILVSSD-MASAEGILTMMSQAGLEPSAQTYT 268
K + +KP + + LT ILV + + A G M + G+ P+ +
Sbjct: 106 RVFHKMEDFQVKPTQKSY------LTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLN 159
Query: 269 KLMCGYAKHGD-MDSVRRLLAQSGSSLVNGD---YLDIIHALA----VSGHGEYIDEVSA 320
L+ K+ + ++S RL + + D Y +I+ L +S E +DE
Sbjct: 160 ILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDE--- 216
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG- 379
M + GL PS +YT L+ G + ++D LL + ++NG
Sbjct: 217 ----------------MEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEE---MIINGI 257
Query: 380 -----DYLDIIHALAVSGHGEYIDEII 401
Y ++ L SGH E++
Sbjct: 258 EPNVFTYSSLMDGLCKSGHSSQAMELL 284
>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 870
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 107/528 (20%), Positives = 205/528 (38%), Gaps = 48/528 (9%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G NRV Y L+S+ +C+ + A K++E M +K FN+ I +A
Sbjct: 214 GGNVNRVVYNTLVSS------FCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRA 267
Query: 173 NDMASAEGI---LTMMSQAGL-EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
+ A I + M + GL +P+ T+ ++ G+ + G M+ ++ + ++K
Sbjct: 268 GKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVS 327
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
S+ L +L + + +L M + G+EP+ +Y +M G ++ M RRL+
Sbjct: 328 LESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMD 387
Query: 289 QSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
S+ V D Y ++H G + E AI+ M + G P+
Sbjct: 388 LMVSNGVYPDTVTYTTLLHGYCSKGK---VFEAKAIL------------NEMIRKGCHPN 432
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLD---IIHALAVSGHGEYIDEIIS 402
T L+ K G +L + D + +++ L +G E E++S
Sbjct: 433 TYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVS 492
Query: 403 KIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGF------LVR 456
++ S N + L+N + + + + + + ING VG +
Sbjct: 493 EMWTDGTNSLGKENPVAGLVNSIH-NVSTNVPDVITYTTLING-LCKVGKLEEAKKKFIE 550
Query: 457 HMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHM 516
M K P S + + +G+I +A R++ + R N + L L+ +
Sbjct: 551 MMAKNLHPD---SVTYDTFVLNFCKQGKISSALRVLKDMER--NGCSKTLQTYNSLILGL 605
Query: 517 VKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATP 576
Q I ++ + + + +HP +I A +++ +P
Sbjct: 606 GSKGQ-IFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSP 664
Query: 577 WKGE---LLKRFIQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFLDA 621
L+K F ++ D + D++ S+ G +LY LM + L A
Sbjct: 665 NVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFNELLA 712
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 12/205 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ ++ + ++ ++ GI P+ VTY + LI +C+ NI+ A K
Sbjct: 510 YNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTY------TSLIDGFCKGNNIDLALK 563
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M+ K + + LI G + DM SA +L + AGL P+ Y ++ G+
Sbjct: 564 LLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFK 623
Query: 206 KHGDMDSIKTKIPSLKPQ-SELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEP 262
+M++++ I K +E C T+L+ +L S + A I T M G+ P
Sbjct: 624 ---NMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILP 680
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLL 287
+ +T L+ G G ++ R++L
Sbjct: 681 DDRAHTVLINGLCNKGQFENARKIL 705
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 139/347 (40%), Gaps = 56/347 (16%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
L+S C++G + A + + + K + +N +I GH + +++ +A + M G
Sbjct: 373 LLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNG 432
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELF------LC---FSFQLT 235
P+A T+T LM GY K GD+++ + K ++ P LC SF+
Sbjct: 433 FTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGR 492
Query: 236 NLL---------------------ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+L + ++ A + M + G+ PS TYT L+ G+
Sbjct: 493 DLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGF 552
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGDYLDI-IHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
K ++D +LL G +DI + + G + D SA H L
Sbjct: 553 CKGNNIDLALKLLNDMKRK---GLKMDIKAYGTLIDGFCKRRDMKSA---------HELL 600
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAV 390
+ AGL P+ Y ++ G+ +++ + + + G Y +I L
Sbjct: 601 NELRG-AGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLK 659
Query: 391 SGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIV 434
SG Y +I +++ G D H I L NKGQ + A +I+
Sbjct: 660 SGRLLYASDIHTEMLSK-GILPDDRAHTVLINGLCNKGQFENARKIL 705
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P D+ Y +L+ L + +D ++ S+GI P+ + + LI+ C G
Sbjct: 643 IPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAH------TVLINGLCNKG 696
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
E A KILE M K S ++N LI GH + ++ A + M GL P TY
Sbjct: 697 QFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYD 756
Query: 199 KLMCGYAKHGD 209
L+ G K GD
Sbjct: 757 ILVNGKFK-GD 766
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 78/208 (37%), Gaps = 41/208 (19%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ +DI Y L+ + S + L +L G+ PNR Y +I+ K ++
Sbjct: 573 LKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMN------ 626
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+E A + + M ++ P + +LI G ++ + A I T M G+ P + +T
Sbjct: 627 NVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHT 686
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G G + +A IL M+
Sbjct: 687 VLINGLCNKGQFE-----------------------------------NARKILEDMNGK 711
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+ PS Y L+ G+ K G++ RL
Sbjct: 712 NMIPSVLIYNTLIAGHFKEGNLQEAFRL 739
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 132/299 (44%), Gaps = 45/299 (15%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V LD Y+ + + ++ L ++ + G P T+ + +I+ ++G
Sbjct: 189 VELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTF------TSVITACVKEG 242
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A ++ + M + ++ V +L+ G+ ++ SA ++ +S++GL P+ TY+
Sbjct: 243 NVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYS 302
Query: 199 KLMCGYAKHGDMDS------------IKTKIPSLKPQSELFL-CFSFQLTNLLILVSSDM 245
L+ G K+G+++ I++ + SL E +L C S+Q N + + +
Sbjct: 303 VLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQ--NAFTMFNDAL 360
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHA 305
++GL + T+ L+ K G M+ L + + ++ + + +
Sbjct: 361 -----------ESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVS--YN 406
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
+ GH D ++A C + E M G P+A T+T LM GY K GD+++
Sbjct: 407 NIILGHCRK-DNINA------ACKVYKE---MLDNGFTPNAVTFTILMDGYFKKGDIEN 455
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 128/322 (39%), Gaps = 40/322 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y L+ N H + ++ GI PN VTY L+S C+ G
Sbjct: 186 NVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSG------LCEIGRWS 239
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L M + + F ALI + + A+ + +M Q + P TYT L+
Sbjct: 240 DAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALI 299
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAG 259
G +G +D + + +S + T L+ S + I MSQ G
Sbjct: 300 NGLCTYGRLDEARQMFYLM--ESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKG 357
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY-- 314
L + TYT L+ GY G D + + Q GS D Y ++ L +G+ E
Sbjct: 358 LVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKAL 417
Query: 315 ------------IDEVSAIVCFVNIC--------FHWLEGPMMSQAGLEPSAQTYTKLMC 354
I+ V+ + +C F L + S+ G++P+ TYT ++
Sbjct: 418 MIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFD-LFCSLFSK-GMKPNVITYTTMIS 475
Query: 355 GYAKHG---DMDSIRRLLAQNG 373
G+ + G + D++ + + ++G
Sbjct: 476 GFCRRGFIHEADALFKKMKEDG 497
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 122/305 (40%), Gaps = 43/305 (14%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL K+ G EP+ VT+ + L+ +C IE A + + + F + +
Sbjct: 139 FLGKMMKLGFEPDLVTF------TSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTT 192
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM--------DSIKTK 216
LI+ + + A I M G+ P+ TY L+ G + G D +K
Sbjct: 193 LIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRG 252
Query: 217 IPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
I +P F L + + V M + E + +M Q + P TYT L+ G
Sbjct: 253 I---QPNVITFT----ALIDAFVKVGKIMEAKE-LYKVMIQMSVYPDVFTYTALINGLCT 304
Query: 277 HGDMDSVRR---LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLE 333
+G +D R+ L+ +G Y +IH S + +++ + I + E
Sbjct: 305 YGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKS---KRVEDGTKI---------FYE 352
Query: 334 GPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAV 390
MSQ GL + TYT L+ GY G D + + Q GS D Y ++ L
Sbjct: 353 ---MSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCY 409
Query: 391 SGHGE 395
+G+ E
Sbjct: 410 NGYVE 414
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/395 (22%), Positives = 160/395 (40%), Gaps = 52/395 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y AL+ + + + L +E + PN VTY S L+ C+ G+++
Sbjct: 188 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTY------SSLLHGLCKAGDLD 241
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M K + + LI+G A+ + +A ++ M+ +Y L+
Sbjct: 242 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALL 301
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSEL-----FLCFSFQLTNLLILVSSDMASAEGIL-TMM 255
GY + G ++ K + +S L + C N +S + A +L M
Sbjct: 302 DGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCN-----ASRLEEARFLLENMK 356
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDM----DSVRRLLAQ-------SGSSLVNG--DYLDI 302
+ AG++P TY+ ++ GY++ + ++ ++A+ + SSL++G +
Sbjct: 357 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 416
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNIC--------FHWLEGPMMSQAGLEPSAQTYTKLMC 354
HA+ V + + D V+ + +C LE M +EPS T+ ++
Sbjct: 417 NHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEE--MVNKRVEPSVGTFNSVIG 474
Query: 355 GYAKHGDMDSIRRLL-AQNGSSLVNG--DYLDIIHALAVSGHGEYIDEIISKIQPGVGYS 411
+ GDMD +LL A L G Y ++ + +G E E+ ++ S
Sbjct: 475 ALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKS 534
Query: 412 ADAAN---------HIYHLINKGQIDAAYRIVNTL 437
+ AAN I L +ID A +V L
Sbjct: 535 SSAANLVPEQAFSALIRGLCKAREIDKAMAVVEEL 569
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 44/255 (17%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P D YNALL Y ++ ++ P+R+TY L+ +C
Sbjct: 291 PADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRG------FCNASR 344
Query: 140 IEGATKILEFMRDKTFPISEGV-FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A +LE M+ + V ++ ++ G+S+A A + M + P+A TY+
Sbjct: 345 LEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYS 404
Query: 199 KLMCGYAKHGDMDSIKTKIPSL-KPQSELF------LCFSFQLTNLLILVSS-------- 243
L+ G K G ++ + ++ KP + LC + + L L+
Sbjct: 405 SLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEP 464
Query: 244 ----------------DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD------ 281
DM A +L M+ GLEP TYT L+ G+++ G M+
Sbjct: 465 SVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELF 524
Query: 282 SVRRLLAQSGSSLVN 296
V R A+ SS N
Sbjct: 525 EVMRRKAKKSSSAAN 539
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 107/550 (19%), Positives = 211/550 (38%), Gaps = 102/550 (18%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ-GIEPNRVTYQQLISNSKLISKYCQD 137
V D+ Y+ ++ + + L ++ ++ G+ P+ VTY ++ C+D
Sbjct: 41 VAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDG------LCRD 94
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN-------------------DMASA 178
G ++ A +++ M+ K + F+ALI G A D S+
Sbjct: 95 GKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSS 154
Query: 179 EGILT-------------------MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS 219
++T M +P TYT L+ G+ K G+++ +
Sbjct: 155 SALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGV 214
Query: 220 LKPQSEL--FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
++ + + + +S L L + D+ A + M+ G P+ TYT L+ G
Sbjct: 215 MEGRKCVPNVVTYSSLLHGL--CKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAA 272
Query: 278 GDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE----YIDEVSAIVCFVN---- 326
+D+ R L+ + ++ D Y ++ G E E++A C +
Sbjct: 273 HKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITY 332
Query: 327 ICF-------------HWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM----DSIRRLL 369
C +L M + AG++P TY+ ++ GY++ + I+ ++
Sbjct: 333 TCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMI 392
Query: 370 AQNG-------SSLVNG--DYLDIIHALAVSGHGEYIDEIISKIQ----PGVGYSADAAN 416
A+N SSL++G + HA+ V + + D + I G + +A
Sbjct: 393 ARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALT 452
Query: 417 HIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPG-VGYSADAANH 475
+ ++NK +++ + N++ + G+ LV +PG V Y+
Sbjct: 453 LLEEMVNK-RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT----TL 507
Query: 476 IYHLINKGQIDAAYRIVNTLARSANINGEQ---LPVGGF--LVRHMVKTNQPIDKVLAVC 530
+ G+++ AY + + R A + +P F L+R + K + IDK +AV
Sbjct: 508 LEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKARE-IDKAMAVV 566
Query: 531 HRLTDENLHP 540
L P
Sbjct: 567 EELRSRECEP 576
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 55/275 (20%), Positives = 102/275 (37%), Gaps = 69/275 (25%)
Query: 150 MRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA-GLEPSAQTYTKLMCGYAKHG 208
MR+ P +E +N ++ G +A + A +L M + P TY+ ++ G+ K G
Sbjct: 1 MREFVAP-NERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQG 59
Query: 209 DMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYT 268
+MD + E + M+++ G+ P TYT
Sbjct: 60 EMDR----------------------------------ACEILREMVTRDGMAPDVVTYT 85
Query: 269 KLMCGYAKHGDMDSVRRLLAQ-----------SGSSLVNG--------DYLDIIHALAVS 309
++ G + G MD ++ + + S+L+ G + L + + S
Sbjct: 86 SVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTS 145
Query: 310 GHGEYIDEVSAIVCFVNICFH---------WLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+D VS+ +C + E M +P TYT L+ G+ K G
Sbjct: 146 SC--RLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSG 203
Query: 361 DMDSIRRLLA-QNGSSLVNG--DYLDIIHALAVSG 392
+++ ++L G V Y ++H L +G
Sbjct: 204 NLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAG 238
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 119/296 (40%), Gaps = 29/296 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ Y+ + L++ I P+ VTY LI C+ GN+E
Sbjct: 409 DVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDG------LCESGNLE 462
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA ++ E M + + L+ G + +++ A I M + G++P YT
Sbjct: 463 GAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRT 522
Query: 202 CGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
G + GD + + ++ + + ++ ++ L + ++ A + +
Sbjct: 523 VGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKV--GNLEKAIEFQRKIFRV 580
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
GL P TYT ++ GY + G R L + S ++ Y +IH A +G E
Sbjct: 581 GLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQA 640
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ S M + G+ P+ T+ L+ G K G++D R L +
Sbjct: 641 FQYST---------------EMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCK 681
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 137/360 (38%), Gaps = 70/360 (19%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ + N +LRV D+ + + GI P +T+ ++ + + G++E
Sbjct: 239 VRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSC------FKAGDLER 292
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
KI M+ + SE +N LI G S++ M A M ++G + ++ L+
Sbjct: 293 VDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIE 352
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
GY K G D A G+ M AG+ P
Sbjct: 353 GYCKQGLFD-----------------------------------EAWGVTDEMLNAGIYP 377
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
+ TY + + G +D R LL+ + V Y ++H G+ + V A +
Sbjct: 378 TTSTYNIYIRALCEFGRIDDARELLSSMAAPDVVS-YNTLMH-----GYIKMRKFVEASL 431
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD-- 380
F + + + PS TY L+ G + G+++ +RL + S L+ D
Sbjct: 432 LFDD----------LKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVI 481
Query: 381 -YLDIIHALAVSGH----GEYIDEIISK-IQP-GVGYSADAANHIYHLINKGQIDAAYRI 433
Y ++ +G+ E DE++ K I+P G Y+ + G + A+R+
Sbjct: 482 TYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGE----LRLGDSEKAFRL 537
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
GNL F + + D Y ++R YL+ D ++ S+ + P+ +TY
Sbjct: 565 GNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITY 624
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
LI + + G +E A + M+ + + NAL++G +A ++ A
Sbjct: 625 FVLIHG------HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRY 678
Query: 182 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 211
L M + G+ P+ +YT L+ +KH D+D
Sbjct: 679 LCKMEEEGISPNKYSYTILI---SKHCDLD 705
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 156/389 (40%), Gaps = 55/389 (14%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P D + YN ++ Y T+ L +G P++VTY LI+ C +G
Sbjct: 290 LPDDFT-YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY------CSLINGLCAEG 342
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++E A ++ + K V+N+L+ G + A ++ M++ G P QTY
Sbjct: 343 DVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYN 402
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMM 255
++ G K G++ + + L F+F N LI + SA ++ M
Sbjct: 403 IVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF---NTLIDGYCKRLKLDSALQLVERM 459
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHG 312
+ G+ P TY ++ G K G ++ V + G Y +I S
Sbjct: 460 WEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNK- 518
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---L 369
++E S ++ MSQ GL P A ++ L+ G+ ++GD++ L L
Sbjct: 519 --MEEASKVIV------------KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKL 564
Query: 370 AQNGSSLVNGDYLDIIHA----LAVSGHGEYIDEIISKIQPGVGY--------SADAAN- 416
+ G S + +I A L + + DE++SK Y S AN
Sbjct: 565 EEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANV 624
Query: 417 -----HIYHLINKGQIDAAY---RIVNTL 437
H+ +I KG I + R++N+L
Sbjct: 625 DRAYMHLVEMIKKGFIPSMSTFGRVINSL 653
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 6/177 (3%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + + + + K+ +G+ P+ V++ LI +C++G++EGA
Sbjct: 506 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG------FCRNGDLEGAYL 559
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + + +K + + FN LI S +M AE I M G + TY L+ G
Sbjct: 560 LFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSC 619
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
K ++D + + + + +F + V+ + A GI+ +M + G+ P
Sbjct: 620 KTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 108/286 (37%), Gaps = 59/286 (20%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPT---DFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
VP D+ +N L+ L + +P + L + + G+ P+ +TY L+S
Sbjct: 257 VP-DLISFNTLINARLKS-GGLTPNLVVELLDMVRNSGLRPDAITYNTLLSACS------ 308
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+D N+EGA K+ E M +NA+I + + A AE + + G P A
Sbjct: 309 RDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAV 368
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
TY L+ +A+ + + +K + M
Sbjct: 369 TYNSLLYAFARERNTEKVKE-----------------------------------VYQQM 393
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNGDYLDIIHALAVSGHGEY 314
+ G TY ++ Y K G +D +L G S N D I + + + G+
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDA--ITYTVLIDSLGKA 451
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
V A M G++P+ QTY+ L+CGYAK G
Sbjct: 452 NRSVEAAALMSE----------MLDVGIKPTLQTYSALICGYAKAG 487
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D + YN L+ +Y + + ++ + G++P TY+ LIS + + +E
Sbjct: 961 DETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLIS------AFGKQKCLE 1014
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ E + K + ++ ++ + + AE +L MM AG+EP+ T LM
Sbjct: 1015 QAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLM 1074
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
Y+ G+ + + +LK + L S D S L M + GLE
Sbjct: 1075 VSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKDYKSGIERLLEMKKEGLE 1134
Query: 262 PSAQTYT 268
P + +T
Sbjct: 1135 PDHRIWT 1141
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 102/238 (42%), Gaps = 28/238 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN+LL + +T + +++ G + +TY + +I Y + G ++
Sbjct: 366 DAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY------NTIIHMYGKQGQLD 419
Query: 142 GATKILEFMRDKTFPISEGV-FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A ++ + M+ + + + + LI +AN A +++ M G++P+ QTY+ L
Sbjct: 420 LALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSAL 479
Query: 201 MCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
+CGYAK G + + + KP + L +S L ++L ++ A + M
Sbjct: 480 ICGYAKAGKREEAEDTFSCMLRSGTKPDN---LAYSVMLD--VLLRGNETRKAWVLYRDM 534
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA-----------QSGSSLVNGDYLDI 302
G PS Y ++ G K D V++ + + S LV G+ D+
Sbjct: 535 ISDGHTPSHSLYELMILGLMKENRSDDVQKTIRDMEELCGMNPLEISSVLVKGECFDL 592
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 47/216 (21%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + ++++ +N++L++Y E +++ G+EP+ TY + LI YC
Sbjct: 920 EANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTY------NTLIIMYC 973
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+D E +++ MR+ GL+P
Sbjct: 974 RDRRPEEGYSLMQQMRN-----------------------------------LGLDPKLD 998
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS---AEGIL 252
TY L+ + K ++ + L + L L SF T ++ +S D S AE +L
Sbjct: 999 TYKSLISAFGKQKCLEQAEQLFEELLSKG-LKLDRSFYHT--MMKISRDSGSDSKAEKLL 1055
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
MM AG+EP+ T LM Y+ G+ ++L+
Sbjct: 1056 QMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLS 1091
Score = 48.1 bits (113), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 106/283 (37%), Gaps = 53/283 (18%)
Query: 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM 185
S +KL+ C DG +E ++E ++D F IS+ ++ ++A ++ I + M
Sbjct: 824 SINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIYSSM 883
Query: 186 SQAGLEPSAQTYT---KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF---------- 232
AG P+ + Y +L+C + D + + +++ + EL + S
Sbjct: 884 KAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDY 943
Query: 233 --------------------QLTNLLILVSSDMASAEG--ILTMMSQAGLEPSAQTYTKL 270
L+I+ D EG ++ M GL+P TY L
Sbjct: 944 KKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSL 1003
Query: 271 MCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNI 327
+ + K ++ +L L G L Y ++ SG +++
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQ------- 1056
Query: 328 CFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
MM AG+EP+ T LM Y+ G+ ++L+
Sbjct: 1057 --------MMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLS 1091
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 93/231 (40%), Gaps = 33/231 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y LL + NEH + ++L G EP+ + ++ YC+ G E A +
Sbjct: 684 YETLLHCCVANEHYAEASQVFSELRLSGCEPSESVCKS------MVVVYCKLGFPETAYQ 737
Query: 146 ILEFMRDKTFPIS-EGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
++ K F + ++ +I + + AE ++ + Q+G P +T+ LM Y
Sbjct: 738 VVNQAETKGFHFACSPMYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAY 797
Query: 205 AKHGDMDSIKTKI---------PSLKPQSELF--LCFSFQLTNLLILVSSDMASAEGILT 253
A+ G + + P+++ ++L LC +L L ++V
Sbjct: 798 AECGCYERARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEE---------- 847
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
+ G + S + ++ +A+ G++ V ++ SS+ YL I
Sbjct: 848 -LQDMGFKISKSSILLMLDAFARAGNIFEVNKIY----SSMKAAGYLPTIR 893
>gi|255660944|gb|ACU25641.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 481
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 17/213 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I Y+AL +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVXRTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E + + M + +N +I G+ + B M E M +EP+
Sbjct: 162 LSGKVETSNRFFXDMXSREITPDVVTYNTMINGYYRVBKMEEXEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + +S L L + M+ A
Sbjct: 222 TYTTLIKGYXSVDRVDBALXLXEEMKXFGIKPNA---ITYSTLLPGL--CDAEKMSEARS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDS 282
IL M P+ + + +L+ G K GD+D+
Sbjct: 277 ILKEMVXKYXAPTDNSIFMRLISGQCKVGDLDA 309
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 7/152 (4%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
G + + F ++ D+ YN ++ Y + + +++ + IEP VTY
Sbjct: 164 GKVETSNRFFXDMXSREITPDVVTYNTMINGYYRVBKMEEXEKYFVEMKGRNIEPTVVTY 223
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
+ LI Y ++ A + E M+ + ++ L+ G A M+ A I
Sbjct: 224 ------TTLIKGYXSVDRVDBALXLXEEMKXFGIKPNAITYSTLLPGLCDAEKMSEARSI 277
Query: 182 LTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDS 212
L M P+ + + +L+ G K GD+D+
Sbjct: 278 LKEMVXKYXAPTDNSIFMRLISGQCKVGDLDA 309
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 128/334 (38%), Gaps = 45/334 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YNA++ DF ++ +GI PN VTY + L++ C G
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTY------TALVNGLCNSGRWN 242
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M + + ++AL+ + + A+ I M + ++P TY+ L+
Sbjct: 243 DAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLI 302
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NLLI---LVSSDMASAEGILTMMSQ 257
G H +D + + CF ++ N LI + + + MSQ
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKG----CFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQ 358
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEY 314
GL + TY L+ G+ + GD+D + +Q S V+ D Y ++ L +G E
Sbjct: 359 RGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEK 418
Query: 315 --------------IDEVSAIVCFVNICFH------WLEGPMMSQAGLEPSAQTYTKLMC 354
+D V+ +C W +S GL+P TYT +M
Sbjct: 419 ALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMS 478
Query: 355 GYAKHGDMDSIRRL--------LAQNGSSLVNGD 380
G G + L L +N S L GD
Sbjct: 479 GLCTKGLQHEVEALYTKMKQEGLMKNDSMLCLGD 512
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 122/309 (39%), Gaps = 38/309 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ +N ++ + L K+ G EP+RVT L++ +C+ +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNG------FCRRNRVS 172
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +++ M + + +NA+I + + A + + G+ P+ TYT L+
Sbjct: 173 DAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALV 232
Query: 202 CGYAKHGDM--------DSIKTKI-PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
G G D IK KI P++ S L F + + + A+ I
Sbjct: 233 NGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAF---------VKNGKVLEAKEIF 283
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAVSGH 311
M + ++P TY+ L+ G H +D ++ S G + D++ + ++G
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK---GCFPDVVSYNTLINGF 340
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ + F MSQ GL + TY L+ G+ + GD+D + +Q
Sbjct: 341 CKAKRVEDGMKLFRK----------MSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQ 390
Query: 372 NGSSLVNGD 380
S V+ D
Sbjct: 391 MDSFGVSPD 399
Score = 54.7 bits (130), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 12/178 (6%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L++ + +F ++++S G+ P+ TY L+ C +G +E A
Sbjct: 368 YNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGG------LCDNGLLEKALV 421
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I E M+ + + +I G + + A G+ +S GL+P TYT +M G
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLC 481
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
G ++ +K + + + ++L L D+ + ++ M G PS
Sbjct: 482 TKGLQHEVEALYTKMKQEGLM------KNDSMLCLGDGDITISAELIKKMLSCGYAPS 533
>gi|357503117|ref|XP_003621847.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496862|gb|AES78065.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 457
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 143/369 (38%), Gaps = 65/369 (17%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G+ P+ +TY LI YC+ I+ A IL M++ +N+L G +
Sbjct: 37 GLNPDIITYNTLIDG------YCRFVGIDAAYNILNRMKEAGINPDVVSYNSLSSGAVRK 90
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF----- 227
+ + + M Q+G+ P +Y LM Y + G + + + E++
Sbjct: 91 CLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFRLGKPEEANGVFRDIFERGEIYPSMAS 150
Query: 228 -------LCFSFQLTNLLILV------------------------SSDMASAEGILTMMS 256
LC + + N L+L + +A A +L
Sbjct: 151 YNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVLTYNAMINGLCKARRLADARRVLNEFC 210
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGE 313
G EP+A TYT +M + G ++ +L++ G + Y ++ AL +G E
Sbjct: 211 DFGFEPNAITYTTVMKCCFRCGRLEQGLEILSEMRRKGFTFDGFAYCTVVAALVKTGRIE 270
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LA 370
DE++ MMS GL P +Y ++ + + G D RL +
Sbjct: 271 EADEIAE--------------KMMSN-GLVPDLASYNTMINLFCRQGRFDEALRLVDEIE 315
Query: 371 QNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQP-GVGYSADAANHIYHLINK-GQID 428
+ G + IIH L G+ E ++ + + G G++ A N I + K G ID
Sbjct: 316 KQGMKCDQYTHTIIIHGLCKDGNFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDID 375
Query: 429 AAYRIVNTL 437
A ++ +++
Sbjct: 376 KAVKVFDSM 384
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 87/397 (21%), Positives = 153/397 (38%), Gaps = 75/397 (18%)
Query: 157 ISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTK 216
+S N I ++N +A AE +L + GL P TY L+ GY + +D+
Sbjct: 5 LSTKFMNITISTMCKSNQIAKAETVLIDGIKLGLNPDIITYNTLIDGYCRFVGIDAAYNI 64
Query: 217 IPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
+ +K S+ + + + + + M Q+G+ P +Y LM Y +
Sbjct: 65 LNRMKEAGINPDVVSYNSLSSGAVRKCLLQKSLDLFDEMLQSGIRPDVWSYNILMHCYFR 124
Query: 277 HG---DMDSVRRLLAQSGSSLVN-GDYLDIIHALAVSGHGE-------------YIDEVS 319
G + + V R + + G + Y +I+ L +G+ ++ EV
Sbjct: 125 LGKPEEANGVFRDIFERGEIYPSMASYNVMINGLCKNGYVNNALMLFRNLRRRGFVPEVL 184
Query: 320 AIVCFVN-ICFHWLEGPMMSQA----------GLEPSAQTYTKLM-----CGYAKHG--D 361
+N +C + ++ A G EP+A TYT +M CG + G
Sbjct: 185 TYNAMINGLC----KARRLADARRVLNEFCDFGFEPNAITYTTVMKCCFRCGRLEQGLEI 240
Query: 362 MDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---I 418
+ +RR G + Y ++ AL +G E DEI K+ G D A++ I
Sbjct: 241 LSEMRR----KGFTFDGFAYCTVVAALVKTGRIEEADEIAEKMMSN-GLVPDLASYNTMI 295
Query: 419 YHLINKGQIDAAYRIVNT-------------------LARSANINGEQLPVGGFLVRHMV 459
+G+ D A R+V+ L + N G + +H+
Sbjct: 296 NLFCRQGRFDEALRLVDEIEKQGMKCDQYTHTIIIHGLCKDGNFEGAE--------KHLD 347
Query: 460 KTNQPGVGYSADAANHIYHLINK-GQIDAAYRIVNTL 495
N G G++ A N I + K G ID A ++ +++
Sbjct: 348 YMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSM 384
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D++ YN ++ ++ + ++E QG++ ++ T+ + +I C+DG
Sbjct: 285 VP-DLASYNTMINLFCRQGRFDEALRLVDEIEKQGMKCDQYTH------TIIIHGLCKDG 337
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N EGA K L++M F + FN+++ +A D+ A + M + TYT
Sbjct: 338 NFEGAEKHLDYMNTLGFGFNLVAFNSILDCLGKAGDIDKAVKVFDSMEV----KDSFTYT 393
Query: 199 KLM 201
L+
Sbjct: 394 SLL 396
>gi|218191150|gb|EEC73577.1| hypothetical protein OsI_08035 [Oryza sativa Indica Group]
Length = 683
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I Y+ L+ ++ H L K++ GI P+ VT + L+ YC+ GN+E
Sbjct: 346 IRDYSKLIDLHSKANHVEDAERILGKMKENGIAPDVVT------SITLVHMYCKVGNLEQ 399
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + +F++ + FP +F ++I H ++ + AE +L M ++ ++P+ + + ++
Sbjct: 400 ANQAFQFLKGEGFPPDMKLFTSMIRAHLKSGEPKQAENLLREMERS-IKPTKELFMDVIL 458
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI--LVSS-----DMASAEGILTMM 255
+A+ G +D + S+ L FQLT L L+ + + A + M
Sbjct: 459 AFAQRGMIDGAERVKTSM-------LLAGFQLTPELYTSLIEAYGRGGHVGQAYTLFEQM 511
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMD 281
+G EP + +M Y +D
Sbjct: 512 RSSGHEPDDRCVAGMMVAYMMKNQLD 537
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 106/259 (40%), Gaps = 41/259 (15%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILE-FMRDKTFPISEGVFNALIYGHSQAND 174
P R + L+ K N+E K+ E + D++F + ++ LI HS+AN
Sbjct: 309 PKRADWMALLERLKA-------RNVELYLKVAEILLADESFGATIRDYSKLIDLHSKANH 361
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK-----PQSELFLC 229
+ AE IL M + G+ P T L+ Y K G+++ LK P +LF
Sbjct: 362 VEDAERILGKMKENGIAPDVVTSITLVHMYCKVGNLEQANQAFQFLKGEGFPPDMKLF-- 419
Query: 230 FSFQLTNLLI--LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL- 286
T+++ L S + AE +L M ++ ++P+ + + ++ +A+ G +D R+
Sbjct: 420 -----TSMIRAHLKSGEPKQAENLLREMERS-IKPTKELFMDVILAFAQRGMIDGAERVK 473
Query: 287 --LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
+ +G L Y +I A GH V + E M +G EP
Sbjct: 474 TSMLLAGFQLTPELYTSLIEAYGRGGH-------------VGQAYTLFE--QMRSSGHEP 518
Query: 345 SAQTYTKLMCGYAKHGDMD 363
+ +M Y +D
Sbjct: 519 DDRCVAGMMVAYMMKNQLD 537
>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
Length = 665
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 122/295 (41%), Gaps = 42/295 (14%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L K+E G+ P+ + + + +I+ +C+ GN++ A KI MR+K + FNA
Sbjct: 125 LLKKVEQNGLRPDSIFF------NPMINAFCESGNVKEAMKIFRKMREKGCKPTASTFNA 178
Query: 165 LIYGHSQANDMASAEGILTMMS-QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI-----P 218
LI G + +L +MS + ++P +TY L+ + +++ +
Sbjct: 179 LIKGFGIIGKPEESSKLLEIMSREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMVGA 238
Query: 219 SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
LKP ++ + + A +++ M + P+ +T ++ GY+K G
Sbjct: 239 GLKPD-----VVTYNTIARAYARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEG 293
Query: 279 DM-DSVRRLLAQSG----------SSLVNGDYLDIIHALAVSGHGEYIDEVSA---IVCF 324
+M D+++ + G +SL+ G +LDI V + E +V +
Sbjct: 294 NMADALKFIYKMQGFGVHPNLFIFNSLLKG-FLDITDTKGVDETLTLMQEFGVKPDVVTY 352
Query: 325 VNICFHWLEGPMMS----------QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
I W +M ++G+EP ++ L GY + G+ LL
Sbjct: 353 STIMNAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGEPKKAEALL 407
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 123/296 (41%), Gaps = 18/296 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN + R Y + T + ++++++ + PN T ++ Y ++GN+
Sbjct: 243 DVVTYNTIARAYARGKETSRAAELISQMQNNKVAPNVRTC------GIVVDGYSKEGNMA 296
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K + M+ + +FN+L+ G D + LT+M + G++P TY+ +M
Sbjct: 297 DALKFIYKMQGFGVHPNLFIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIM 356
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
++ G M+ + + +F + + + + AE +L M+ G
Sbjct: 357 NAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGEPKKAEALLEAMATHGAH 416
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
P+ +T ++ G+ M+ R+ + V + L+ L + G+GE + A
Sbjct: 417 PNVVMFTTIISGWCSAAKMEDALRVYDRMCRMDVQPN-LNTFETL-IWGYGEANEPWKAE 474
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
+M + G+ P T + + G ++ +R+L + SS++
Sbjct: 475 ELL----------QIMEEMGVLPRKNTVQLVADAWRAIGFINEAKRILNDDQSSVL 520
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G+ PN VT+ + LI +C++G ++ A +I + M ++ +N LIYG +
Sbjct: 235 KGLVPNGVTF------TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-IKTKIPSLKPQSEL-FLC 229
D+ A+ ++ M GL P TYT L+ G K GD+++ + + +K L +
Sbjct: 289 KGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
++ ++ L S AE +L M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 349 YTALISGLCQEGRS--VDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 127/306 (41%), Gaps = 57/306 (18%)
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS-- 212
+P S FN L++ + ++ A+ + +++ L PS ++ LM GY K GD+D
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191
Query: 213 -IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLM 271
+K + Q +++ +S + L S M A + M GL P+ T+T L+
Sbjct: 192 RLKNAMQVSGVQPDVY-TYSVLINGL--CKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH----GEYIDEVSAIVCF 324
G+ K+G +D + Q S ++ D Y +I+ L G + IDE
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDE------- 301
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI----RRLLAQNGSSLVNGD 380
M GL P TYT L+ G K GD+++ +R++ +N + D
Sbjct: 302 ------------MIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN----IRLD 345
Query: 381 YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKG---QIDAAYRIVNTL 437
D+ + +SG + G S DA + ++N G +I I+N
Sbjct: 346 --DVAYTALISGLCQE------------GRSVDAEKMLREMLNVGLKPEIGTYTMIINEF 391
Query: 438 ARSANI 443
+ ++
Sbjct: 392 CKKGDV 397
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 120/299 (40%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + + P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ ++ M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
GL P TYT L+ G K GD+++ R+ + + L + Y +I L G
Sbjct: 303 IMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + +N+ GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKMLREMLNV-------------GLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
>gi|15238925|ref|NP_199046.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75154282|sp|Q8L844.1|PP413_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g42310, mitochondrial; Flags: Precursor
gi|21539517|gb|AAM53311.1| maize crp1 protein-like [Arabidopsis thaliana]
gi|332007411|gb|AED94794.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 709
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 108/284 (38%), Gaps = 36/284 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNALL+ Y+ ++++E +G+ P+ TY S LI Y G E A
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY------SLLIDAYVNAGRWESARI 395
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M + VF+ L+ G + +L M G++P Q Y ++ +
Sbjct: 396 VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 455
Query: 206 KHGDMDSIKTKI---------PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
K +D T P + L C +++ AE + M
Sbjct: 456 KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV---------AEEMFEAME 506
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
+ G P A TY ++ Y D ++RLL + S + + + H V +G+
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV--VTHTTLVDVYGKSGR 564
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
AI C M GL+PS+ Y L+ YA+ G
Sbjct: 565 FNDAIECLEE----------MKSVGLKPSSTMYNALINAYAQRG 598
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 72/186 (38%), Gaps = 41/186 (22%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ Y D E L K++SQGI PN VT+ + L+ Y + G A +
Sbjct: 517 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTH------TTLVDVYGKSGRFNDAIE 570
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
LE M+ S ++NALI ++Q A +M+ GL+PS L+ +
Sbjct: 571 CLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFG 630
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ + +E F +L M + G++P
Sbjct: 631 ED-------------RRDAEAF----------------------AVLQYMKENGVKPDVV 655
Query: 266 TYTKLM 271
TYT LM
Sbjct: 656 TYTTLM 661
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/306 (17%), Positives = 118/306 (38%), Gaps = 43/306 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY----QQLISNSK------------ 129
YNAL+ N + +AK+ G + + V Y Q L ++K
Sbjct: 200 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKE 259
Query: 130 ---------------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAND 174
+I + + G+ A ++L + ++I + +
Sbjct: 260 IERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGR 319
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234
AE + + Q+G++P + Y L+ GY K G + ++ + ++ + ++ L
Sbjct: 320 TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSL 379
Query: 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSL 294
+ + SA +L M ++P++ +++L+ G+ G+ ++L + S
Sbjct: 380 LIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIG 439
Query: 295 VNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMC 354
V D + + + G++ A+ F M+S+ G+EP T+ L+
Sbjct: 440 VKPDRQ--FYNVVIDTFGKFNCLDHAMTTF---------DRMLSE-GIEPDRVTWNTLID 487
Query: 355 GYAKHG 360
+ KHG
Sbjct: 488 CHCKHG 493
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 89/245 (36%), Gaps = 12/245 (4%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+IS G A + E +R +NAL+ G+ + + AE +++ M + G
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+ P TY+ L+ Y G +S + + ++ F F +
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+L M G++P Q Y ++ + K +D + S + D + +
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD--RVTWNTLID 487
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
H ++ + A F M + G P A TY ++ Y D ++RLL
Sbjct: 488 CHCKHGRHIVAEEMF----------EAMERRGCLPCATTYNIMINSYGDQERWDDMKRLL 537
Query: 370 AQNGS 374
+ S
Sbjct: 538 GKMKS 542
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 94/253 (37%), Gaps = 54/253 (21%)
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
+NALI ++ ND+ A ++ M Q G + Y+ ++ + +DS+
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSV------- 251
Query: 221 KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
L L + D LE Q ++ G+AK GD
Sbjct: 252 ------------MLLRLYKEIERD--------------KLELDVQLVNDIIMGFAKSGDP 285
Query: 281 DSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
+LL +G S + II ALA SG + A F +
Sbjct: 286 SKALQLLGMAQATGLSAKTATLVSIISALADSGR-----TLEAEALFEE----------L 330
Query: 338 SQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHG 394
Q+G++P + Y L+ GY K G D +S+ + + G S Y +I A +G
Sbjct: 331 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 390
Query: 395 EYIDEIISKIQPG 407
E ++ +++ G
Sbjct: 391 ESARIVLKEMEAG 403
>gi|115447253|ref|NP_001047406.1| Os02g0611400 [Oryza sativa Japonica Group]
gi|47497186|dbj|BAD19233.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|47497609|dbj|BAD19678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536937|dbj|BAF09320.1| Os02g0611400 [Oryza sativa Japonica Group]
gi|215715250|dbj|BAG95001.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623225|gb|EEE57357.1| hypothetical protein OsJ_07494 [Oryza sativa Japonica Group]
Length = 683
Score = 67.4 bits (163), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 93/206 (45%), Gaps = 21/206 (10%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I Y+ L+ ++ H L K++ GI P+ VT + L+ YC+ GN+E
Sbjct: 346 IRDYSKLIDLHSKANHVEDAERILGKMKENGIAPDVVT------SITLVHMYCKVGNLEQ 399
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + +F++ + FP +F ++I H ++ + AE +L M ++ ++P+ + + ++
Sbjct: 400 ANQAFQFLKGEGFPPDMKLFTSMIRAHLKSGEPKQAENLLREMERS-IKPTKELFMDVIL 458
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI--LVSS-----DMASAEGILTMM 255
+A+ G +D + S+ L FQLT L L+ + + A + M
Sbjct: 459 AFAQRGMIDGAERVKTSM-------LLAGFQLTPELYTSLIEAYGRGGHVGQAYTLFEQM 511
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMD 281
+G EP + +M Y +D
Sbjct: 512 RSSGHEPDDRCVAGMMVAYMMKNQLD 537
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 106/259 (40%), Gaps = 41/259 (15%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILE-FMRDKTFPISEGVFNALIYGHSQAND 174
P R + L+ K N+E K+ E + D++F + ++ LI HS+AN
Sbjct: 309 PKRADWMALLERLKA-------RNVELYLKVAEILLADESFGATIRDYSKLIDLHSKANH 361
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK-----PQSELFLC 229
+ AE IL M + G+ P T L+ Y K G+++ LK P +LF
Sbjct: 362 VEDAERILGKMKENGIAPDVVTSITLVHMYCKVGNLEQANQAFQFLKGEGFPPDMKLF-- 419
Query: 230 FSFQLTNLLI--LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL- 286
T+++ L S + AE +L M ++ ++P+ + + ++ +A+ G +D R+
Sbjct: 420 -----TSMIRAHLKSGEPKQAENLLREMERS-IKPTKELFMDVILAFAQRGMIDGAERVK 473
Query: 287 --LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
+ +G L Y +I A GH V + E M +G EP
Sbjct: 474 TSMLLAGFQLTPELYTSLIEAYGRGGH-------------VGQAYTLFE--QMRSSGHEP 518
Query: 345 SAQTYTKLMCGYAKHGDMD 363
+ +M Y +D
Sbjct: 519 DDRCVAGMMVAYMMKNQLD 537
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 122/301 (40%), Gaps = 35/301 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P ++ YN ++ + + + ++ + G+ P+ VTY S L+ C
Sbjct: 332 EFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTY------SALVDGLC 385
Query: 136 QDGNIEGATKILEFM-RDKTFPIS---EGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
+ G ++ A +LE M ++ FP S + NAL S+A + A L M G
Sbjct: 386 KLGKLDRACDLLEEMSKEGVFPDSFTDASILNAL----SKAGKVDYALSHLETMKARGST 441
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
P TY L+ G K G +D T + + FS+ + + S A A I
Sbjct: 442 PDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAI 501
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG- 310
M + G+ P Y L+ G A++G D LL +SL D+ ++H + + G
Sbjct: 502 FQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK---TSLCKPDF--VMHKMVLDGL 556
Query: 311 --HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
G+ D + M+ AG A TY ++ G K G +D R+L
Sbjct: 557 CKAGKAEDACEVV-------------ERMADAGFPADAFTYISVVSGLRKLGKVDKARQL 603
Query: 369 L 369
+
Sbjct: 604 V 604
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 153/419 (36%), Gaps = 86/419 (20%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI-----------SN 127
VP D+ Y + + D K+ ++G + + V + +I +
Sbjct: 211 VP-DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG------------------- 168
+++I C+ G ++ A K E M + P S +FN LI+
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329
Query: 169 -------------------HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 209
+A + A+ ++ M+ GL P TY+ L+ G K G
Sbjct: 330 MKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGK 389
Query: 210 MDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS----AEGILTMMSQAGLEPSAQ 265
+D + + + F T+ IL + A A L M G P
Sbjct: 390 LDRACDLLEEMSKEG----VFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLV 445
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIV 322
TY L+ G K G +D LA+ ++ D Y II AL SG A
Sbjct: 446 TYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQA-----AGAHA 500
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL 382
F M + G+ P Y L+ G A++G D LL +SL D++
Sbjct: 501 IFQE----------MVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK---TSLCKPDFV 547
Query: 383 ---DIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHI---YHLINKGQIDAAYRIVN 435
++ L +G E E++ ++ G+ ADA +I L G++D A ++V+
Sbjct: 548 MHKMVLDGLCKAGKAEDACEVVERMADA-GFPADAFTYISVVSGLRKLGKVDKARQLVD 605
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P D Y+ +LR + L +L G++ N +TY S +I C+
Sbjct: 70 PPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITY------SVVIDGCCKASR 123
Query: 140 IEGATKILEFMRDKTFPISEGV-FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A +I + M + + V FN+L+ G M+ A + M++AG EP+ +Y+
Sbjct: 124 VDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYS 183
Query: 199 KLMCGYAKHGDMD 211
L+ G K G +D
Sbjct: 184 TLLDGLCKAGRLD 196
Score = 46.2 bits (108), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 164/424 (38%), Gaps = 31/424 (7%)
Query: 138 GNIEGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G I ++ +++ R K + S +N + ++AN A M + G P T
Sbjct: 16 GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL-TMM 255
Y+ ++ G K G++D K + L+ ++ + +S + A I TM
Sbjct: 76 YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHG 312
S G P T+ L+ G M L +A++G Y ++ L +G
Sbjct: 136 SGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGR- 194
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM----DSIRRL 368
+DE C W E M + P YT + G K + D R++
Sbjct: 195 --LDEA---------CRLWEE---MVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKM 240
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQID 428
+ + GS + +I L GH E + + G +A +I++
Sbjct: 241 VTK-GSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPP 299
Query: 429 AAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAAN-HIYHLINKGQIDA 487
+A + NTL A ++LP G L + M + + + N + +L Q+D
Sbjct: 300 SA-ELFNTLIH-AVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDE 357
Query: 488 AYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAV 547
A +VN +A + ++ + + LV + K + +D+ + ++ E + P +F A
Sbjct: 358 AQELVNEMA-NYGLSPDVVTYSA-LVDGLCKLGK-LDRACDLLEEMSKEGVFPDSFTDAS 414
Query: 548 LIKA 551
++ A
Sbjct: 415 ILNA 418
>gi|302769103|ref|XP_002967971.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
gi|300164709|gb|EFJ31318.1| hypothetical protein SELMODRAFT_145138 [Selaginella moellendorffii]
Length = 1354
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 110/264 (41%), Gaps = 30/264 (11%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
++F +L GI PN T+ + + ++GN+E A + MR+ F S VF
Sbjct: 725 SEFYQRLPEMGITPNSRTF------VVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVF 778
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKP 222
AL+ +S+ AE ++ + +AGLE Y ++ Y+K G S + K
Sbjct: 779 KALLALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLG---SYRKAALVFKG 835
Query: 223 QSELFLCFSFQLTNLLILVSSD---MASAEGILTMMSQAGLEPSAQTYTKLMCGYAK--- 276
E+ N LI++ S + A+ +L M + G P+ TYT L+ Y +
Sbjct: 836 MQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQA 895
Query: 277 HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM 336
+ D + V + +A++G Y +I+ +G I+EV
Sbjct: 896 YEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVI---------------EQ 940
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHG 360
M G EPS T LM Y K G
Sbjct: 941 MKADGFEPSLTTIHMLMDSYGKGG 964
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 26/200 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YNA++ VY + + ++ QG P+ VTY + ++ + +DG IE
Sbjct: 219 DIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTY------NSVLHAFARDGRIE 272
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+I MRD E +N +I+ + +A AE + M + G P + T+T L+
Sbjct: 273 EVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLI 332
Query: 202 CGYAKHGDM--------DSIKTKI-PSLKPQSELFLCFSFQLTNLLILVSSDMAS-AEGI 251
K G + D +K+++ P+L+ S + ++ +DM S AE
Sbjct: 333 DTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYA----------KADMFSDAEHT 382
Query: 252 LTMMSQAGLEPSAQTYTKLM 271
+ M +AG+ P Y+ ++
Sbjct: 383 YSCMLRAGVRPDLLAYSVML 402
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 115/305 (37%), Gaps = 70/305 (22%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG-AT 144
YN+L+ VY + S L +++ +G P+ VT+ + +I + G EG A+
Sbjct: 117 YNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTF------NIVIKARTRGGMQEGLAS 170
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
+L+ + +N LI S N ++ A I M + G +P TY ++ Y
Sbjct: 171 SLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVY 230
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
+ G ++ +A I +M + G P A
Sbjct: 231 GRAGRVE-----------------------------------AASSIFRIMQEQGFTPDA 255
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSG----------- 310
TY ++ +A+ G ++ V R+ + + D Y +IH +G
Sbjct: 256 VTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQ 315
Query: 311 ---HGEYIDEVSAIVC--------FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
G D V+ V FVN E + SQ + P+ Q ++ ++C YAK
Sbjct: 316 MKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQ--VRPTLQAFSAMICAYAK- 372
Query: 360 GDMDS 364
DM S
Sbjct: 373 ADMFS 377
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 7/201 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L+ N +++ QG +P+ TY + +IS Y + G +E
Sbjct: 184 DTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTY------NAMISVYGRAGRVE 237
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A+ I M+++ F +N++++ ++ + E I MM A TY ++
Sbjct: 238 AASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMI 297
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
Y K G + +K + +F + + + + A + M ++ +
Sbjct: 298 HMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVR 357
Query: 262 PSAQTYTKLMCGYAKHGDMDS 282
P+ Q ++ ++C YAK DM S
Sbjct: 358 PTLQAFSAMICAYAK-ADMFS 377
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/352 (18%), Positives = 138/352 (39%), Gaps = 43/352 (12%)
Query: 64 LPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQ 123
+ C F V + V + I+ Y L +++ + E F L+ G N Y
Sbjct: 624 IDCLHAFEVKDSAMHVAI-IASYGKL-KLWQNAEIVFR------DLQRHGFAGNTSAY-- 673
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
S L+S Y + GN E AT+ L+ M + N ++ +A
Sbjct: 674 ----SALLSAYAETGNFERATRALDNMVAAGLQPNAACANYVLEAFGRAGKAKELSEFYQ 729
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLL 238
+ + G+ P+++T+ + ++++G+++ ++ ++ P ++F LL
Sbjct: 730 RLPEMGITPNSRTFVVIFHAFSRNGNLEEARSMYRQMREAGFSPSIQVF-------KALL 782
Query: 239 ILVSSDMAS--AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN 296
L S + AE ++ + +AGLE Y ++ Y+K G + +
Sbjct: 783 ALYSRETVEIDAEELVKDIKKAGLELDMDIYNHMISLYSKLGSYRKAALVFKGMQEIGCS 842
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY 356
D + + + + E A++ M + G P+ TYT L+ Y
Sbjct: 843 PDATTFNTLIMLYSRNQMVQEAQALL------------REMIKTGNAPNISTYTTLISAY 890
Query: 357 AK---HGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
+ + D + + + +A+ G Y +I+ +G I+E+I +++
Sbjct: 891 GRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMK 942
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 89/218 (40%), Gaps = 22/218 (10%)
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
Q Y LM YA+HGD +S++ + ++ + +F N++I + EG+ +
Sbjct: 115 QVYNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTF---NIVIKARTRGGMQEGLASS 171
Query: 255 MSQ----AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
+ Q AGL P TY L+ + + + + + + D ++V G
Sbjct: 172 LLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVYG 231
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
++ S+I +M + G P A TY ++ +A+ G ++ + R+
Sbjct: 232 RAGRVEAASSIF------------RIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRG 279
Query: 371 QNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQ 405
+ + D Y +IH +G +E+ +++
Sbjct: 280 MMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMK 317
Score = 42.4 bits (98), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 6/133 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E+ D + +N L+ +Y N+ L ++ G PN TY LIS + Y
Sbjct: 838 EIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAY- 896
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
E A + + + + +N +I + +A + E ++ M G EPS
Sbjct: 897 -----EDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEVIEQMKADGFEPSLT 951
Query: 196 TYTKLMCGYAKHG 208
T LM Y K G
Sbjct: 952 TIHMLMDSYGKGG 964
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 134/329 (40%), Gaps = 39/329 (11%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL + +G P+ +I +KLI + NI AT+++E + P +NA
Sbjct: 91 FLECMVDKGYTPD------VILCTKLIKGFFNSRNIGKATRVMEILERYGKP-DVFAYNA 143
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD-SIKTKIPSLKPQ 223
LI G +AN + +A +L M G P TY ++ + G +D +++ LK
Sbjct: 144 LISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDN 203
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
E + ++ + ++ + A +L M GLEP TY ++ G K +D
Sbjct: 204 CEPTV-ITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKA 262
Query: 284 RRLLAQSGSSLVNGD---YLDIIHALAVSG---HGE-YIDEVSAIVCFVNICFHWL---- 332
LL S D Y ++ L G GE I E+ +I C N+ H +
Sbjct: 263 FELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGT 322
Query: 333 ---EGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGS-----S 375
+G + M + GL+P A Y L+ G+ + G +D L S
Sbjct: 323 LCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPD 382
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKI 404
+VN Y I+ L +G + E+ K+
Sbjct: 383 IVN--YNTIMAGLCRTGKADQALEVFEKL 409
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E+ P ++S YN L + + + + KL +QGI+P+ +TY LIS C
Sbjct: 411 EVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISC------LC 464
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+DG ++ A ++L M+ + + +N ++ G + N A +L M++ G +P+
Sbjct: 465 RDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNET 524
Query: 196 TYTKLMCGYAKHG 208
TY L+ G G
Sbjct: 525 TYILLIEGIGFSG 537
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 153/407 (37%), Gaps = 81/407 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-------------- 127
D+ YNAL+ ++ + L +++S+G P+ VTY +I +
Sbjct: 137 DVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIF 196
Query: 128 SKLISKYCQ---------------DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
+L+ C+ DG I+ A K+L+ M K +NA+I G +
Sbjct: 197 EELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKE 256
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG----------DMDSIKTKIPSLKP 222
+ A +L +S G +P TY L+ G +M SI K P++
Sbjct: 257 MMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCK-PNVVT 315
Query: 223 QSELF--LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
S L LC + A +L M + GL+P A Y L+ G+ + G +
Sbjct: 316 HSILIGTLC-----------RDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRL 364
Query: 281 DSVRRLLAQSGS-----SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
D L S +VN Y I+ L +G + EV F L+
Sbjct: 365 DLATEFLEYMISDGCLPDIVN--YNTIMAGLCRTGKADQALEV----------FEKLD-- 410
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGD----MDSIRRLLAQNGSSLVNGDYLDIIHALAVS 391
+ G P+ +Y L GD ++ I +LL Q G Y +I L
Sbjct: 411 ---EVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQ-GIDPDEITYNSLISCLCRD 466
Query: 392 GHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLA 438
G + E++ +Q G Y + ++ L+ +++ A + LA
Sbjct: 467 GMVDEAIELLVDMQSG-RYRPNVVSYNIILLGLCKVNRANDAIEVLA 512
Score = 43.1 bits (100), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 8/177 (4%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
T+FL + S G P+ V Y +++ C+ G + A ++ E + + P + +
Sbjct: 368 TEFLEYMISDGCLPDIVNYNTIMAG------LCRTGKADQALEVFEKLDEVGCPPNVSSY 421
Query: 163 NALIYGHSQANDMASA-EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
N L + D A E IL +++Q G++P TY L+ + G +D + ++
Sbjct: 422 NTLFSALWSSGDRYRALEMILKLLNQ-GIDPDEITYNSLISCLCRDGMVDEAIELLVDMQ 480
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
S+ + L + + A +L M++ G +P+ TY L+ G G
Sbjct: 481 SGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSG 537
>gi|218200036|gb|EEC82463.1| hypothetical protein OsI_26904 [Oryza sativa Indica Group]
Length = 346
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 80/211 (37%), Gaps = 41/211 (19%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V D+ Y L+R D + + ++ GIEPN V Y S L+ YC+ G
Sbjct: 146 VRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVY------SSLLQGYCKSG 199
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
E K+ M +K ++ LI + A G++ MM + GLEP+ TY
Sbjct: 200 RWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYN 259
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ K G S+K I G+L MS+
Sbjct: 260 VLINCMCKEG---SVKEAI--------------------------------GVLKKMSEK 284
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
G+ P TY L+ G + +MD LL +
Sbjct: 285 GVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 81/200 (40%), Gaps = 5/200 (2%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN +L H A L + +EP+ +S + L+ C D +
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAG---ALLRAMSLEPHPACRPNAVSYTVLMRALCADRRAD 132
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L MR + LI G A ++ A ++ M ++G+EP+ Y+ L+
Sbjct: 133 QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLL 192
Query: 202 CGYAKHGDMDSIKTKIPSLKPQS-ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
GY K G + + + + E + L + L V A G++ MM + GL
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGK-AKKAHGVMDMMVRRGL 251
Query: 261 EPSAQTYTKLMCGYAKHGDM 280
EP+ TY L+ K G +
Sbjct: 252 EPNVVTYNVLINCMCKEGSV 271
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 140/342 (40%), Gaps = 46/342 (13%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
G L V D+ Y A++ + ++ D +++ + I PN VT+ LI +
Sbjct: 186 GLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYG------F 239
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C G ++ A +L M + FN LI G + ++ A +L++M + G+EP+
Sbjct: 240 CIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNV 299
Query: 195 QTYTKLMCGY--------AKH-GDMDSIKTKIPSLKPQSELF--LCFSFQLTNLLILVSS 243
TYT LM GY AKH + S++ P++ S + LC N ++
Sbjct: 300 VTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLC-----KNKMV---- 350
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII 303
A + M + P+ TY+ L+ G K G + V L+ + + + +
Sbjct: 351 --DEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYN 408
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
L +D+ A++ M G++P TYT L+ G K+G +
Sbjct: 409 SLLNGLCKNHQVDKAIALL------------TKMKDEGIQPDMSTYTTLVDGLCKNGRLK 456
Query: 364 SIRRL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIIS 402
+R+ L G L Y +I+ L G + DE +S
Sbjct: 457 DAQRIYQDLLCKGYPLNIRMYTVMINGLCKEG---FFDEALS 495
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 10/210 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L+ + ++ G+ PN VT+ + LI +C++G ++
Sbjct: 205 DVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF------TTLIDGHCKNGRVD 258
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M ++ +N LIYG + D+ A+ + MS GL+P TYT L+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLI 318
Query: 202 CGYAKHGDMDS-IKTKIPSLKPQSEL-FLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K G +++ + + +K L + ++ ++ L S AE +L M G
Sbjct: 319 DGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS--VDAEKMLREMLSVG 376
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
L+P TYT ++ + K GD+ + +LL +
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/299 (21%), Positives = 119/299 (39%), Gaps = 24/299 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E P + +N L+ ++ + G+ P+ V++ L++ Y
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNG------YI 182
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ GN++ ++ M+ ++ LI G + + M A + M GL P+
Sbjct: 183 KLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
T+T L+ G+ K+G +D + QS ++ + D+ A+ + M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
S GL+P TYT L+ G K G +++ R+ + + L + Y +I L G
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+D + M GL+P TYT ++ + K GD+ + +LL +
Sbjct: 363 --VDAEKML-------------REMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKE 406
Score = 40.4 bits (93), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 29/155 (18%)
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIH 304
A+ + +++ GL PS ++ LM GY K G++D RL +S V D Y +I+
Sbjct: 155 AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLIN 214
Query: 305 ALA----VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
L + E DE M GL P+ T+T L+ G+ K+G
Sbjct: 215 GLCKESKMDDANELFDE-------------------MLDNGLVPNGVTFTTLIDGHCKNG 255
Query: 361 DMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSG 392
+D + Q S ++ D Y +I+ L G
Sbjct: 256 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKG 290
>gi|255660920|gb|ACU25629.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 484
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 90/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I Y+AL +V L + K+ S+GIEP R + +I +
Sbjct: 108 ELGVERTIKSYDALFKVILRRGRFMMAKRYFNKMLSEGIEPTRHXFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCN-----AEKMSEARS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M + P+ + + +L+ K G++D+ +L
Sbjct: 277 ILKEMVDKYMAPTDNSIFXRLISSQCKTGNLDAAADVL 314
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 107/278 (38%), Gaps = 24/278 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKEG---IVQESVKLFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + + L IL A+ M G+EP+ + ++ G+ G +++ R
Sbjct: 114 TIKSYDALFKVILRRGRFMMAKRYFNKMLSEGIEPTRHXFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D I + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--ITYNTMINGYYRVKKMDEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPG 407
TYT L+ GY +D RL+ + + + + L + E + E S ++
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEM 281
Query: 408 V-GYSADAANHIYHLI-----NKGQIDAAYRIVNTLAR 439
V Y A N I+ + G +DAA ++ + R
Sbjct: 282 VDKYMAPTDNSIFXRLISSQCKTGNLDAAADVLKAMIR 319
Score = 39.3 bits (90), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 67/162 (41%), Gaps = 4/162 (2%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + ++AL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKLFQKMEELGVERTIKSYDALFKVILRRGRFMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ + ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPTRHXFNVMIWGFFLSGKVETANRFFEDMKSREISPDVITYNTMINGYYRV--KKMDE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
AE M +EP+ TYT L+ GY +D RL+ +
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEE 245
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 106/264 (40%), Gaps = 59/264 (22%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+++SQG++ N V + LI+ YC+ G I+ A ++ + M K F +N +
Sbjct: 380 EMQSQGLDMNLVIFNTLING------YCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAG 433
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G + N A+ L M + G++P+A ++T ++ + K G
Sbjct: 434 GLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEG------------------- 474
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
++ AE + M + G +P+ TY L+ GY+K G + RL
Sbjct: 475 ----------------NLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLK 518
Query: 288 AQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
+ S + D Y ++H V G E A+ +C + GL
Sbjct: 519 DEMESIGMTSDIYTYTTLVHGECVFGKVE-----EALTLLNEVC----------RKGLAI 563
Query: 345 SAQTYTKLMCGYAKHGDMDSIRRL 368
S TYT ++ G +K G + RL
Sbjct: 564 SIVTYTAIISGLSKEGRSEEAFRL 587
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 151/365 (41%), Gaps = 40/365 (10%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D + ++ +GI+PN VTY + L++ Y + + EG ++L M + +
Sbjct: 236 DLMLEMTGKGIKPNVVTY------NTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYT 289
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
LI + + +A AE + M + G+E +T ++ K G+M K
Sbjct: 290 LLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNM---KRAFALFDEL 346
Query: 224 SELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
+E L + LI S + +AE ++ M GL+ + + L+ GY K G +
Sbjct: 347 NERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMI 406
Query: 281 DSVRRL---LAQSGSSLVNGDYLDIIHALA-VSGHGEYIDEV----------SAIVCFVN 326
D R+ + + G Y I L ++ H E + +A+ +
Sbjct: 407 DEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIM 466
Query: 327 ICFHWLEGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
I H EG + M + G +P+ TY L+ GY+K G + RL + S +
Sbjct: 467 IDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGM 526
Query: 378 NGD---YLDIIHALAVSGHGEYIDEIISKI-QPGVGYSADAANHIYHLINK-GQIDAAYR 432
D Y ++H V G E +++++ + G+ S I ++K G+ + A+R
Sbjct: 527 TSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFR 586
Query: 433 IVNTL 437
+ + +
Sbjct: 587 LYDEM 591
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 91/227 (40%), Gaps = 22/227 (9%)
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
K++EF D T +I G + + A+ ++ M+ G++P+ TY L+ Y
Sbjct: 205 KMVEFKVDVTVY----SMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAY 260
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
K D + + + ++ ++ ++ L S +A AE + M + G+E
Sbjct: 261 IKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADI 320
Query: 265 QTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
+T ++ K G+M L L + G Y +IH SG +D +
Sbjct: 321 HVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQ---LDAAEML 377
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
V M SQ GL+ + + L+ GY K G +D R+
Sbjct: 378 V-----------NEMQSQ-GLDMNLVIFNTLINGYCKKGMIDEALRM 412
>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g22960, mitochondrial; Flags: Precursor
gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 718
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 138/361 (38%), Gaps = 72/361 (19%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ + N +L+V D+ + + GI P +T+ ++ + + G++E
Sbjct: 203 VRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSC------FKAGDLER 256
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
KI M+ + SE +N LI G S+ M A M ++G + ++ L+
Sbjct: 257 VDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE 316
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
GY K G D A G+ M AG+ P
Sbjct: 317 GYCKQGLFDD-----------------------------------AWGVTDEMLNAGIYP 341
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
+ TY +C G +D R LL+ + V Y ++H G V A +
Sbjct: 342 TTSTYNIYICALCDFGRIDDARELLSSMAAPDVVS-YNTLMHGYIKMGKF-----VEASL 395
Query: 323 CFVNICFHWLEGPMMSQAG-LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD- 380
F ++ +AG + PS TY L+ G + G+++ +RL + + L+ D
Sbjct: 396 LFDDL-----------RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDV 444
Query: 381 --YLDIIHALAVSGH----GEYIDEIISK-IQP-GVGYSADAANHIYHLINKGQIDAAYR 432
Y ++ +G+ E DE++ K I+P G Y+ A + G D A+R
Sbjct: 445 ITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGE----LRLGDSDKAFR 500
Query: 433 I 433
+
Sbjct: 501 L 501
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 101/485 (20%), Positives = 175/485 (36%), Gaps = 60/485 (12%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+++ + IE + VTY LI+ + ++G +E A + MR F ++ FN LI
Sbjct: 263 EMKRRNIEFSEVTYNILING------FSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE 316
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G+ + A G+ M AG+ P+ TY +C G +D + + S+
Sbjct: 317 GYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPD--- 373
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
S+ + A + + + PS TY L+ G + G+++ +RL
Sbjct: 374 -VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 288 AQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
+ + L+ D Y ++ +G+ EV M + G++P
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVY---------------DEMLRKGIKP 477
Query: 345 SAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDI----IHALAVSGHGEYIDEI 400
YT G + GD D RL + ++ + L I I L G+ E
Sbjct: 478 DGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEF 537
Query: 401 ISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARS----------ANINGEQ 447
KI VG D + I + GQ A + + + R I G
Sbjct: 538 QRKIFR-VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHA 596
Query: 448 LPVGGFLVRHMVKTNQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSANINGE 504
G T G + H +Y + G ID AYR + + E
Sbjct: 597 -KAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYL------CKMEEE 649
Query: 505 QLPVGGFLVRHMVKTNQPIDK---VLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGA 561
+P + ++ N +K V+ + + D+ + P + L K H+ K+ +
Sbjct: 650 GIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFK-HLEKDHESRE 708
Query: 562 VETFE 566
VE E
Sbjct: 709 VEFLE 713
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 117/296 (39%), Gaps = 29/296 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ Y+ + L + I P+ VTY LI C+ GN+E
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDG------LCESGNLE 426
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA ++ E M + + L+ G + +++ A + M + G++P YT
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 202 CGYAKHGDMDS---IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
G + GD D + ++ + + ++ ++ L + ++ A + +
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV--GNLVKAIEFQRKIFRV 544
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
GL P TYT ++ GY ++G R L + + Y +I+ A +G E
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ S M + G+ P+ T+ L+ G K G++D R L +
Sbjct: 605 FQYST---------------EMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCK 645
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D++ YN + + +F K+ G+ P+ VTY + +I Y ++G +
Sbjct: 514 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTY------TTVIRGYLENGQFK 567
Query: 142 GATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A + E +R + +P S + LIYGH++A + A T M + G+ P+ T+ L
Sbjct: 568 MARNLYDEMLRKRLYP-SVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 626
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MSQ 257
+ G K G++D + ++ + +S+ +LI + D E ++ + M
Sbjct: 627 LYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSY---TMLISKNCDFEKWEEVVKLYKEMLD 683
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
+EP T+ L KH + D R
Sbjct: 684 KEIEPDGYTHRALF----KHLEKDHESR 707
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 6/166 (3%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
S+G PN VTY L++ YC+ ++ A KIL M +N L G+
Sbjct: 311 SKGFFPNAVTYNTLVNG------YCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYC 364
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
QA +AE +L M G+ P T+ L+ G +HG ++ K+ L+ +
Sbjct: 365 QAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGII 424
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
++ + + ++ + A + ++ G+ P TYT +M G +
Sbjct: 425 TYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRR 470
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 109/279 (39%), Gaps = 57/279 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ ++A++ V+ ++ + ++PN VTY LI+ C G ++
Sbjct: 247 DVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLING------LCIHGLLD 300
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A K+L FM K F + +N L+ G+ ++ + A IL +MS G++ TY L
Sbjct: 301 EAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLY 360
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY + G + +AE +L M G+
Sbjct: 361 QGYCQAGQFN-----------------------------------AAEKVLARMVSCGVL 385
Query: 262 PSAQTYTKLMCGYAKHGDMD-SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
P T+ L+ G +HG ++ ++ +L S V G I + + + G
Sbjct: 386 PDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVG---IITYNIIIKG---------- 432
Query: 321 IVCFVN-ICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+C N + W ++ G+ P TYT +M G +
Sbjct: 433 -MCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRR 470
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 102/282 (36%), Gaps = 61/282 (21%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ +N + D L +E GI P+ +TY LI++ G + +
Sbjct: 181 YNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNS------LITRLFHSGKWGVSAR 234
Query: 146 IL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
IL + MR P F+A+I + + A+ M Q ++P+ TY L+ G
Sbjct: 235 ILSDMMRMGIHP-DVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGL 293
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
HG +D A+ +L M G P+A
Sbjct: 294 CIHGLLD-----------------------------------EAKKVLNFMVSKGFFPNA 318
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAI 321
TY L+ GY K +D ++L V+GD Y + +G ++V A
Sbjct: 319 VTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLA- 377
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
M G+ P T+ L+ G +HG ++
Sbjct: 378 --------------RMVSCGVLPDIYTFNMLLDGLCEHGKIE 405
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/399 (18%), Positives = 151/399 (37%), Gaps = 66/399 (16%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H L + D+ ++ L+ + L K+ G EP+ VT+ L++
Sbjct: 98 HIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNG----- 152
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C I+ A +++ + + + ++N +I + + +A +L M + G+ P
Sbjct: 153 -FCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRP 211
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
TY L+ + LF S + IL
Sbjct: 212 DVITYNSLI----------------------TRLFH-------------SGKWGVSARIL 236
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVS 309
+ M + G+ P T++ ++ + K G + ++ + V+ + Y +I+ L +
Sbjct: 237 SDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIH 296
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G +DE ++ F M G P+A TY L+ GY K +D ++L
Sbjct: 297 G---LLDEAKKVLNF------------MVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKIL 341
Query: 370 AQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISK-IQPGVGYSADAANHIYH-LINK 424
V+GD Y + +G ++++++ + GV N + L
Sbjct: 342 CVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEH 401
Query: 425 GQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQ 463
G+I+ A + L +S + G + +++ M K N+
Sbjct: 402 GKIEKALVKLEDLQKSETVVG--IITYNIIIKGMCKANK 438
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 124/308 (40%), Gaps = 29/308 (9%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
G V DI YN L+ + L ++E+ G PN VT + L+
Sbjct: 171 GRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTC------TTLMDGL 224
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C+DG ++ A ++LE M+ K F ++ LI G ++ + + M G+ +
Sbjct: 225 CKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANV 284
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD--MASAEGIL 252
TY+ L+ G + G T + ++ ++ T L+ + D A +L
Sbjct: 285 VTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY--TGLIDGLCKDGRATHAMDLL 342
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+M + G EPS TY L+ G K G D + R++ + G Y ++ L
Sbjct: 343 NLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDK 402
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIR 366
G +DE + N F ++ LEP+ T+ L+ G K G + I
Sbjct: 403 GK---VDEALKL---FNSMFD-------NENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 449
Query: 367 RLLAQNGS 374
R + + GS
Sbjct: 450 RKMVKKGS 457
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 124/319 (38%), Gaps = 64/319 (20%)
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C++G + A ++ M K+ +N LI G +A + A G+L M AG P++
Sbjct: 155 CRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNS 214
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
T T LM G K G MD A +L
Sbjct: 215 VTCTTLMDGLCKDGRMD-----------------------------------EAMELLEA 239
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
M + G + Y L+ G+ +G++D + L + ++ + Y ++H L G
Sbjct: 240 MKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQ 299
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD----MDSIRR 367
+ + V +N M++ G+ P TYT L+ G K G MD +
Sbjct: 300 WKEANTV------LNA---------MAEHGIHPDVVTYTGLIDGLCKDGRATHAMD-LLN 343
Query: 368 LLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEI-ISKIQPGVGYSADAANH---IYHLIN 423
L+ + G N Y ++ L G ID I ++ G AD + + L +
Sbjct: 344 LMVEKGEEPSNVTYNVLLSGLC--KEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCD 401
Query: 424 KGQIDAAYRIVNTLARSAN 442
KG++D A ++ N++ + N
Sbjct: 402 KGKVDEALKLFNSMFDNEN 420
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 107/293 (36%), Gaps = 22/293 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKL--ESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
D+ YN L++ D + +EPN T+ LI C++G
Sbjct: 388 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGG------LCKEGR 441
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A KI M K + +N L+ G +A + A + + G P++ TY+
Sbjct: 442 LTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSI 501
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L+ G+ K ++ K ++ F + + + A+ + M A
Sbjct: 502 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN 561
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEV 318
EP ++ ++ G K GD V+ L + + D L + +S GE +
Sbjct: 562 CEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAK 621
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
SA+ M +G P A Y L+ G + GD I LL Q
Sbjct: 622 SAL-------------ERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQ 661
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 149/362 (41%), Gaps = 42/362 (11%)
Query: 62 GNLPCEDPFSVHTGELD--VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRV 119
GN+ E+ F + L + L I Y LL + L ++E G++P+ +
Sbjct: 389 GNI--EESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLL 446
Query: 120 TYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAE 179
TY S LI C+ G +E A ++ E M K + V +A+I G + ++ A+
Sbjct: 447 TY------SVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQ 500
Query: 180 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI 239
++++ + Y ++ GYAK G+ I + S K E + + N LI
Sbjct: 501 MYFDSVTKSDVAEEIILYNIMIDGYAKLGN---IGEAVRSYKQIIEKGISPTIVTFNSLI 557
Query: 240 ---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN 296
+A A +L + GL P++ TYT LM GY + GDM S+ +L + + +
Sbjct: 558 YGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIK 617
Query: 297 GD---YLDIIHALAVSGH--------------GEYIDEVSAIVCFVNIC-FHWLEGPM-- 336
Y ++ L G G + D+++ + C H L+
Sbjct: 618 PTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQL 677
Query: 337 ---MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA--QNGS-SLVNGDYLDIIHALAV 390
M Q L+PS TY L+ G +G++ RLL Q+ S L Y II A
Sbjct: 678 HNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCA 737
Query: 391 SG 392
G
Sbjct: 738 KG 739
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 134/325 (41%), Gaps = 53/325 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQ------------------- 122
D+ YN LL +F +E+ G+EP+ VTY
Sbjct: 304 DVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVV 363
Query: 123 ----------QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
L++ + LI +CQ GNIE + K+ E M + +S + L+ ++
Sbjct: 364 QRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKS 423
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIKTKIPSLKPQSELFLC 229
+ A +L M GL+P TY+ L+ G K G ++ + ++ S + F+C
Sbjct: 424 GRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVC 483
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSVR--RL 286
S ++ L ++ A+ ++++ + Y ++ GYAK G++ ++VR +
Sbjct: 484 -SAIISGL--FEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQ 540
Query: 287 LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
+ + G S + +I+ G A+ I H GL P++
Sbjct: 541 IIEKGISPTIVTFNSLIYGFCKKG-----KLAEAVKLLDTIKVH----------GLVPTS 585
Query: 347 QTYTKLMCGYAKHGDMDSIRRLLAQ 371
TYT LM GY + GDM S+ +L +
Sbjct: 586 VTYTTLMNGYCEEGDMHSMFDMLHE 610
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 111/270 (41%), Gaps = 53/270 (19%)
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
+++I + +I Y + GNI A + + + +K + FN+LIYG + +A A +
Sbjct: 513 EEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKL 572
Query: 182 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELF------LC- 229
L + GL P++ TYT LM GY + GDM S+ + + ++KP + LC
Sbjct: 573 LDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCK 632
Query: 230 -------------------FSFQLTNLLILVS----SDMASAEGILTMMSQAGLEPSAQT 266
F Q+T ++ S D+ A + M Q L+PS T
Sbjct: 633 EGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVT 692
Query: 267 YTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVC 323
Y L+ G +G++ RLL L Y II A G D +A+V
Sbjct: 693 YNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKG-----DVQNALVF 747
Query: 324 FVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
F M + G E S + Y+ ++
Sbjct: 748 F----------HQMVERGFEVSIRDYSAVI 767
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 89/193 (46%), Gaps = 7/193 (3%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP ++ Y L+ Y + S D L ++E++ I+P ++TY + ++ C++G
Sbjct: 582 VPTSVT-YTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITY------TVVVKGLCKEG 634
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ + ++L++M + + +N +I +A+D+ A + M Q L+PS TY
Sbjct: 635 RLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYN 694
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G +G++ + +L+ QS ++ D+ +A M +
Sbjct: 695 VLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVER 754
Query: 259 GLEPSAQTYTKLM 271
G E S + Y+ ++
Sbjct: 755 GFEVSIRDYSAVI 767
Score = 40.8 bits (94), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 124/315 (39%), Gaps = 49/315 (15%)
Query: 153 KTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-- 210
+ + ++ V++ L +S+A + A +L M L+ S TY L+ +H D+
Sbjct: 162 RDWDLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNL-RHTDIMW 220
Query: 211 DSIKTKIPSLKPQSELFLCFSFQLTN-LLILVSSDMASAEGILTMMSQAGLE---PSAQT 266
D S PQ+E TN +LI + + +T + + G E PS +
Sbjct: 221 DVYNEIKASGVPQNEY--------TNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVS 272
Query: 267 YTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE------ 317
+ LM G+ K G +D + + D Y ++H L V+G E E
Sbjct: 273 FNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDME 332
Query: 318 ---VSAIVCFVNICFH-----------WLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
V + NI + W M GL P TYT L+CG+ + G+++
Sbjct: 333 NHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIE 392
Query: 364 ---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPG--VGYSADAANH- 417
++ + G L Y ++ +L SG IDE + + +G D +
Sbjct: 393 ESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGR---IDEAVILLHEMEVIGLKPDLLTYS 449
Query: 418 --IYHLINKGQIDAA 430
I+ L +G ++ A
Sbjct: 450 VLIHGLCKRGAVEEA 464
>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Brachypodium distachyon]
Length = 968
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 113/284 (39%), Gaps = 37/284 (13%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN +L Y+ + L +E G+E + TY +I K C+ A
Sbjct: 262 YNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMID------KLCKMKRSTHAYL 315
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ MR E +N LI G + M A I M + GL+PS TYT L+ GY
Sbjct: 316 LLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYC 375
Query: 206 KHGDMDS-----IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
++G +D + ++ +KP + +++ + A + M + G
Sbjct: 376 RNGTIDEALRVLYEMQVAGVKPSEVTYSA----------MLNGSVHEAFSVYDNMEKYGC 425
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P TY L+ G K G + + ++ S ++ L+ + L + HG +DE
Sbjct: 426 SPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNAL-LLGICNHGS-LDEA 483
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+++C M P TYT L+ G+ + G +
Sbjct: 484 ------LDLC------EKMVTINFIPDIHTYTILLSGFCRKGKI 515
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 115/522 (22%), Positives = 205/522 (39%), Gaps = 96/522 (18%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
P VT ++ NS C +GN++GA ++ M+ + P + +N +++ + +
Sbjct: 222 PLDVTTCNIVLNS-----MCIEGNLKGAKHMIHKMKSCSLP-NVITYNTILHWYVKKGRF 275
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKL---MCGYAK--HGDMDSIKTKIPSLKPQSELFLCF 230
+A +L M + G+E TY + +C + H + + + +L P +
Sbjct: 276 KAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTY--- 332
Query: 231 SFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
N LI S M A I M + GL+PS TYT L+ GY ++G +D R+L
Sbjct: 333 -----NTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVL 387
Query: 288 AQ-----------SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM 336
+ + S+++NG + A +V + E + + N+ +G
Sbjct: 388 YEMQVAGVKPSEVTYSAMLNG---SVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGH 444
Query: 337 MSQAGLE-------PSA---QTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIH 386
+ QA PSA +T L+ G HG +D L + +V +++ IH
Sbjct: 445 LVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEK----MVTINFIPDIH 500
Query: 387 ALAV--SGHGEYIDEIISKIQPGV---------GYSADAANH---IYHLINKGQIDAAYR 432
+ SG KI P V G D + + LI +GQ+ AA
Sbjct: 501 TYTILLSGFCRK-----GKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASY 555
Query: 433 I-----------VNTLARSANINGEQLPVGGFLVRHMV--KTNQPGVGYSADAANHIYH- 478
+ + +A ++ +NG L G M NQ V + + N + H
Sbjct: 556 LFQEIICKEGMYADCIAYNSMMNG-YLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHG 614
Query: 479 LINKGQIDAAYRIVNTLARSA----NINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLT 534
I KG + + + + R N+ L +G L +H + I+ + ++
Sbjct: 615 HIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILG--LSKHGM-----IEIAVKFLDKMV 667
Query: 535 DENLHPRAFNLAVLIKAHVLKEDYTGAVETFEYCVNQFRATP 576
E ++P + VLI A K + A++ F C+ +P
Sbjct: 668 LEGIYPDRLSFDVLINAFSEKSRMSDALQLFN-CMKWLYMSP 708
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 140/347 (40%), Gaps = 65/347 (18%)
Query: 121 YQQLISNSKLISKYCQDGNIEGA-TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAE 179
Y I+ + +++ Y + G + I + ++K +P + +N L++GH + ++ +
Sbjct: 567 YADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYP-NPASYNILMHGHIKKGHLSRSI 625
Query: 180 GILTMMSQAGLEPSAQTYTKLMCGYAKHG-------------------DMDSIKTKIPSL 220
+ M + G++P+ TY L+ G +KHG D S I +
Sbjct: 626 YLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAF 685
Query: 221 KPQS------ELFLCFSF-----------QLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
+S +LF C + + N LI + S + +L M ++GLEP
Sbjct: 686 SEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCD-VLRDMVESGLEPK 744
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNGDYLD--IIHALAVSGHGEYIDEVSA 320
Y L+ + GD++ RL + + +V + D I+ L+ G E
Sbjct: 745 HTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVE-----EG 799
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM---CGYAKHGDMDSIRRLLAQNGSSLV 377
I+ F +I +AG+ P+ T+T LM C AK D ++ L+ G +
Sbjct: 800 IIVFCSII----------RAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKID 849
Query: 378 NGDYLDIIHAL----AVSGHGEYIDEIISK-IQPGVGYSADAANHIY 419
Y +I L VS E +E+ SK ++P V IY
Sbjct: 850 VVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIY 896
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 32/255 (12%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL K+ +GI P+R+++ LI+ + + + A ++ M+ S ++A
Sbjct: 662 FLDKMVLEGIYPDRLSFDV------LINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSA 715
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+I G + N + + +L M ++GLEP Y L+ + GD++ LK +
Sbjct: 716 MINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDING----AFRLKEEM 771
Query: 225 ELFLCFSFQLTNLLIL--VSSDMASAEGILTMMS--QAGLEPSAQTYTKLM---CGYAKH 277
++ + I+ +S EGI+ S +AG+ P+ T+T LM C AK
Sbjct: 772 TALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKI 831
Query: 278 GDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
D ++ L+ G +D++ + I + I C + + E M
Sbjct: 832 SDALHLKSLMESCGLK------IDVV------TYNVLITGLCKIQCVSDALELYEE---M 876
Query: 338 SQAGLEPSAQTYTKL 352
GL P+ TYT L
Sbjct: 877 KSKGLRPNVTTYTTL 891
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 140/353 (39%), Gaps = 48/353 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y LLR H +F++ + P+ + + L + L+ C G+++
Sbjct: 428 DVYTYRNLLRGLCKGGHLVQAKEFMSCIVHI---PSAIDQKTL---NALLLGICNHGSLD 481
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + E M F + L+ G + + A +L MM + GL P TYT L+
Sbjct: 482 EALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLL 541
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL-CFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
G K G + + + + ++ C ++ L + + E + M+Q +
Sbjct: 542 KGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKV 601
Query: 261 EPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
P+ +Y LM G+ K G + + + + + G N Y +I L +S HG
Sbjct: 602 YPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLI--LGLSKHG----- 654
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL-------- 369
+ I +L+ M G+ P ++ L+ +++ M +L
Sbjct: 655 ------MIEIAVKFLDK--MVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYM 706
Query: 370 ---AQNGSSLVNG----DYL----DIIHALAVSG----HGEYIDEIISKIQPG 407
++ S+++NG ++L D++ + SG H YI I +K + G
Sbjct: 707 SPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFG 759
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 164/433 (37%), Gaps = 73/433 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI---------------- 125
D+ YNAL+ + + +F +++ + ++PN ++Y LI
Sbjct: 201 DVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFF 260
Query: 126 -------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
+ S LI C+ GN+ A + + M + ++ + L+ G +
Sbjct: 261 VDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEE 320
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELF 227
M AE + M +AG+ P+ Q YT L+ G+ K MD + + +KP L+
Sbjct: 321 GMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLW 380
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ L + S + + I+T M ++G+ + YT LM Y K G+ LL
Sbjct: 381 GTIVWGLCS-----ESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLL 435
Query: 288 AQS---GSSLVNGDYLDIIHALAVSG--------HGEYID-----EVSAIVCFVN-ICFH 330
+ G+ + + +I L G G D V+ ++ +C +
Sbjct: 436 EEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKN 495
Query: 331 WLEGPM------MSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDY 381
G M + P YT ++ G KHG+ ++R + + G L Y
Sbjct: 496 NCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAY 555
Query: 382 LDIIHALAVSGH----GEYIDEIISK-IQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
++ L+ G +++ E+I K I P Y L G ID A + N
Sbjct: 556 TSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYEL---GNIDEAIELQNE 612
Query: 437 LARSANINGEQLP 449
L I+G P
Sbjct: 613 LVEKGLIHGNSNP 625
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 120/325 (36%), Gaps = 52/325 (16%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
DF + GI P TY +I + C++G++ A + E M+ +N
Sbjct: 118 DFFRDMVGAGIAPTVFTYNIMIGH------VCKEGDMLTARSLFEQMKKMGLTPDIVTYN 171
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIP 218
LI G+ + + + + M G EP TY L+ + K M + K
Sbjct: 172 TLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDK 231
Query: 219 SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM-------MSQAGLEPSAQTYTKLM 271
LKP + L+ D EG++ M M++ GL P+ TY+ L+
Sbjct: 232 DLKPN-------VISYSTLI-----DALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLI 279
Query: 272 CGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNIC 328
K G++ L + Q L Y ++ L G +E+
Sbjct: 280 DANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRA------- 332
Query: 329 FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL---DII 385
M +AG+ P+ Q YT L+ G+ K MD L + + D L I+
Sbjct: 333 --------MGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIV 384
Query: 386 HALAVSGHGEYIDEIISKI-QPGVG 409
L E I++++ + G+G
Sbjct: 385 WGLCSESKLEECKIIMTEMKESGIG 409
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 61/328 (18%), Positives = 125/328 (38%), Gaps = 43/328 (13%)
Query: 54 CSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQG 113
C +LG + ++ H V L+I Y LL + + + G
Sbjct: 283 CKAGNLGEAFMLADEMLQEH-----VDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAG 337
Query: 114 IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
+ PN Y + LI + + +++ A ++ MR+K ++ +++G +
Sbjct: 338 VTPNLQAY------TALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSES 391
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ 233
+ + I+T M ++G+ + YT LM Y K G+ + ++ +
Sbjct: 392 KLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRD-------LGTE 444
Query: 234 LTNLLILVSSDMASAEGILT-------MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+T + D G++ M L+P+ YT L+ G K+ + ++L
Sbjct: 445 VTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKL 504
Query: 287 LAQSGSSLVNGDYLDIIHALAVSG---HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
+ + D I + + G HG + + ++ + MM + G+E
Sbjct: 505 FDEMQDKNMIPD--KIAYTAMIDGNLKHGNFQEALN------------MRNKMM-EMGIE 549
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
YT L+ G ++ G + R+ LA+
Sbjct: 550 LDLYAYTSLVWGLSQCGQVQQARKFLAE 577
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 121/294 (41%), Gaps = 29/294 (9%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
++ + G+ P+ +TY LI+ YC+ GN++ A + ++ S +N L
Sbjct: 360 FVEMRAMGLLPDLITYNSLING------YCKAGNLKEALWLFGDLKRAGLAPSVLTYNIL 413
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
+ G+ + D+ A M + G +P TYT LM G K ++ ++ + +
Sbjct: 414 LDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGL 473
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
CF++ L+ + A + +M G+ TY + G K G++
Sbjct: 474 QPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYV 533
Query: 286 LLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
L + S + D Y +IHA G + E I +G ++S GL
Sbjct: 534 LWMKMVSDGLQPDCITYTCLIHAHCERGR---LREARDI----------FDGMLVS--GL 578
Query: 343 EPSAQTYTKLMCGYAKHGDMDS----IRRLLAQNGSSLVNGDYLDIIHALAVSG 392
PSA TYT + Y + G++ S +++L + G Y +IHAL G
Sbjct: 579 PPSAVTYTVFIHAYCRRGNLYSAYGWFQKML-EEGVRPNEVTYNVLIHALCRMG 631
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 32/239 (13%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN----------S 128
VP I N +LR D A++ GIEP+ VTY L+ + +
Sbjct: 192 VPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAA 251
Query: 129 KL---------------------ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
KL I+ + G +E A ++++ MR + S FN LI
Sbjct: 252 KLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKASAFTFNPLIT 310
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G+ + A + M G+ P+ TY ++ G + G++++ + K ++ L
Sbjct: 311 GYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLP 370
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
++ + ++ A + + +AGL PS TY L+ GY + GD++ RR
Sbjct: 371 DLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRF 429
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 137/383 (35%), Gaps = 74/383 (19%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQ--GIEPNRVTYQQLISN------ 127
+L + I YN LL + L ++E++ G P+ VTY +I+
Sbjct: 224 QLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGE 283
Query: 128 ----------------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
+ LI+ Y G++E A + M ++ + +N +
Sbjct: 284 LEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTI 343
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I+G ++ ++ +A M GL P TY L+ GY K G++ LK
Sbjct: 344 IHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAG- 402
Query: 226 LFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
L S N+L+ D+ A M + G +P TYT LM G K ++
Sbjct: 403 --LAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAM 460
Query: 283 VRRLLAQSGSSLVNGD---YLDIIHALAVSG--------------HGEYIDEVSAIVCFV 325
VR + S + D Y I A + G G D V+ +
Sbjct: 461 VREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLD 520
Query: 326 NIC---------FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
+C W++ M GL+P TYT L+ + + G + R + L
Sbjct: 521 GLCKSGNLKDAYVLWMK---MVSDGLQPDCITYTCLIHAHCERGRLREARDIF---DGML 574
Query: 377 VNG------DYLDIIHALAVSGH 393
V+G Y IHA G+
Sbjct: 575 VSGLPPSAVTYTVFIHAYCRRGN 597
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 79/197 (40%), Gaps = 22/197 (11%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
S+GI + VTY + C+ GN++ A + M + LI+ H
Sbjct: 505 SRGISSDTVTYNIFLDG------LCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHC 558
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSE 225
+ + A I M +GL PSA TYT + Y + G++ S K ++P
Sbjct: 559 ERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEV 618
Query: 226 LFLCFSFQLTNLLILVSSDMAS---AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+ N+LI M A M + GL P+ TYT L+ G K G+ +
Sbjct: 619 TY--------NVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEE 670
Query: 283 VRRLLAQSGSSLVNGDY 299
RL ++ ++ D+
Sbjct: 671 AIRLYSEMHQHGIHPDH 687
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 107/273 (39%), Gaps = 36/273 (13%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL + S +PN TY + +IS YC++ + A + E M+++ + +
Sbjct: 372 FLKLIRSDNYKPNVHTY------TAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTT 425
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM-DSIKTKIPSLKPQ 223
LI GH +A + + A ++ +MS G P+ TY ++ G K G ++ K + Q
Sbjct: 426 LIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQ 485
Query: 224 SELFLCFSFQLTNLLILVS-----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
E IL+S +DM A L M + G +P YT L+ + +
Sbjct: 486 IEA------DGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQN 539
Query: 279 DMDSVRRLLAQS---GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
M +L + G + Y +I +VS V F
Sbjct: 540 MMKDSEKLFDEVIKLGLAPTKETYTSMICGYCRE------KKVSLAVKFFQ--------- 584
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
MS G P + +Y L+ G K +D R+L
Sbjct: 585 KMSDHGCAPDSISYGALISGLCKESRLDEARQL 617
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y A++ Y E +++ QG+ PN TY + LI +C+ GN
Sbjct: 384 NVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTY------TTLIDGHCKAGNFS 437
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +++E M ++ F + +N+++ G + A +L Q +E TYT L+
Sbjct: 438 KAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILI 497
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELF--LCFSFQLTNLLILVSSDMASAEGILTM 254
K DM+ K +P L+ L +F N+ M +E +
Sbjct: 498 SEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNM-------MKDSEKLFDE 550
Query: 255 MSQAGLEPSAQTYTKLMCGYAK 276
+ + GL P+ +TYT ++CGY +
Sbjct: 551 VIKLGLAPTKETYTSMICGYCR 572
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 115/284 (40%), Gaps = 42/284 (14%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F K+ G+ PN + Y S +IS C+ G+++ A ++LE M + + +
Sbjct: 301 FFHKVTKMGLSPNLINY------SSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTS 354
Query: 165 LIYGHSQANDMASA-EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
LI+G + A L ++ +P+ TYT ++ GY K + + +K Q
Sbjct: 355 LIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQ 414
Query: 224 SELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
L + LI + + + A ++ +MS G P+ TY ++ G K G
Sbjct: 415 G---LVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRA 471
Query: 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFH---------- 330
+ +LL + + D + + + +S + D A+V F+N F
Sbjct: 472 EEAFKLLNTGFQNQIEAD--GVTYTILISEQCKRADMNQALV-FLNKMFKVGFQPDIHLY 528
Query: 331 ------WLEGPMMSQA----------GLEPSAQTYTKLMCGYAK 358
+ MM + GL P+ +TYT ++CGY +
Sbjct: 529 TTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCR 572
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 113/294 (38%), Gaps = 61/294 (20%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++ ++G+ P+ TY+ +I YC++GN+ A + + M ++ F + +I
Sbjct: 234 EMSARGVYPDSCTYKYIIVG------YCRNGNVLEADRWICEMMERGFVVDNATLTLIIT 287
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
+ + + A +++ GL P+ Y+ ++ G K G S+K EL
Sbjct: 288 AFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRG----------SVKQAFEL- 336
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
L M + G +P+ T+T L+ G K G + RL
Sbjct: 337 ------------------------LEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLF 372
Query: 288 AQSGSSLVNGD-YLDIIHALA--VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
+ L+ D Y +H +SG+ + A + F M + GL P
Sbjct: 373 LK----LIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLF----------ERMKEQGLVP 418
Query: 345 SAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSGHGE 395
+ TYT L+ G+ K G+ + L++ G Y I+ L G E
Sbjct: 419 NTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAE 472
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/316 (18%), Positives = 127/316 (40%), Gaps = 24/316 (7%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++ + + G ++ A ++ MR++ ++ V N +I ++ + A + MS G
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 239
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+ P + TY ++ GY ++G++ I + + + + L S + A
Sbjct: 240 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 299
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHAL 306
+++ GL P+ Y+ ++ G K G + LL ++G + +IH L
Sbjct: 300 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 359
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G E A F+ ++ +P+ TYT ++ GY K +
Sbjct: 360 CKKGWTE-----RAFRLFLK---------LIRSDNYKPNVHTYTAMISGYCKEEKLSRAE 405
Query: 367 RL---LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYH 420
L + + G Y +I +G+ E++ ++ G+ + + +
Sbjct: 406 MLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELM-ELMSNEGFFPNTCTYNSIVDG 464
Query: 421 LINKGQIDAAYRIVNT 436
L +G+ + A++++NT
Sbjct: 465 LCKRGRAEEAFKLLNT 480
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 136/348 (39%), Gaps = 42/348 (12%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + D+ YNAL+ ++ F + ++ +GI PN +TY + +I +C
Sbjct: 318 ERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY------NSMIDGFC 371
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ ++ A + M K F LI G+ A + +L M + GL +
Sbjct: 372 KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 431
Query: 196 TYTKLMCGYAKHGDMDS--------IKTKI-PSLKPQSELF--LCFSFQLTNLLILVSSD 244
TY L+ G+ GD+++ I + + P + + L LC + +L + L + +
Sbjct: 432 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 491
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLD 301
S + G+EP TY L+CG G L + + D Y
Sbjct: 492 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+I L +DE + + FV+ M P+ T+ L+ GY K G
Sbjct: 552 MIDGLCKQSR---LDEATQM--FVS----------MGSKSFSPNVVTFNTLINGYCKAGR 596
Query: 362 MDSIRRLLAQNGSSLVNGD---YLDIIHALA----VSGHGEYIDEIIS 402
+D L + G + D Y+ +I+ ++G + E+IS
Sbjct: 597 VDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 644
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 119/310 (38%), Gaps = 40/310 (12%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ DI +N L++ + K+ G+ P+ VT+ + L+ C +
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTF------TTLLHGLCVED 163
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A M + T + F L+ G + + A +L M + GL+P+ TY
Sbjct: 164 RVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELF---LCFSFQLTNLLILVSSDMASAEGILTMM 255
++ G K GD S + ++ S + + +S + +L + A+ + T M
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSL--CKDGRHSDAQNLFTEM 281
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH- 311
+ G+ P TY ++ G+ G +LL + ++ D Y +I+A G
Sbjct: 282 QEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKF 341
Query: 312 ---GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---I 365
E DE M G+ P+ TY ++ G+ K +D+ +
Sbjct: 342 FEAAELYDE-------------------MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 382
Query: 366 RRLLAQNGSS 375
L+A G S
Sbjct: 383 FYLMATKGCS 392
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 111/297 (37%), Gaps = 41/297 (13%)
Query: 99 TFSPTDFLAKLESQG-IEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPI 157
T S + L K+E I PN V Y S +I C+DG A + M++K
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIY------SAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 158 SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI 217
+N++I G + + AE +L M + + P TY L+ + K G
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELY 348
Query: 218 PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
+ P+ + ++ + +AE + +M+ G P T+T L+ GY
Sbjct: 349 DEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 408
Query: 278 GDMDSVRRLLAQ-----------SGSSLVNGDYL--DIIHALAVS----GHGEYIDEVSA 320
+D LL + + ++L++G L D+ AL +S G D V+
Sbjct: 409 KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 468
Query: 321 IVCFVNIC-----------FHWLEGPMMSQ------AGLEPSAQTYTKLMCGYAKHG 360
+C F ++ M G+EP TY L+CG G
Sbjct: 469 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 525
>gi|115489040|ref|NP_001067007.1| Os12g0557800 [Oryza sativa Japonica Group]
gi|113649514|dbj|BAF30026.1| Os12g0557800 [Oryza sativa Japonica Group]
Length = 682
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 24/248 (9%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ YN ++ ++ + + +++ +G PN VT+ LIS Y + GN+
Sbjct: 419 VMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISG------YSKLGNVHN 472
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A +L+ + + F F +LI G + + A M++ G+ P+AQTY LM
Sbjct: 473 AKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMH 532
Query: 203 GYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
G ++ K KI + P + +SF L + AE I M +
Sbjct: 533 TLCSAGHVNKAIDLLNKMKIDGVTPDA-----YSFNALILSFCRMRKVDKAEDIFNDMVR 587
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNG-DYLDIIHALAVSGH-- 311
G+ P + TY L+ ++ + +L +SG S N Y I+ ALA G
Sbjct: 588 FGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFS 647
Query: 312 --GEYIDE 317
GE +D+
Sbjct: 648 EAGELMDK 655
Score = 46.6 bits (109), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 144/375 (38%), Gaps = 64/375 (17%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++E +GI PN TY L+ +C G +E A ++L+ M++K SE + L++
Sbjct: 234 QMEGEGIRPNVFTYTMLVDG------FCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVH 287
Query: 168 GHSQANDMASAEGILT--MMSQAGLEPSAQTYTKLMC--------------------GY- 204
G + + A +L+ + + L PSA +T L C GY
Sbjct: 288 GVFRCLERDKAYRMLSDWLGHETSLHPSA-CHTMLYCLSKKDMAKEAVEFEKRMSARGYL 346
Query: 205 ---AKHGDMDSIKTKIPSLKPQSELFLCF-------SFQLTNLLI---LVSSDMASAEGI 251
G + S K + EL F F + ++I L + + A
Sbjct: 347 LDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHY 406
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAVS 309
L M GL S +Y ++ + K G +D ++ Q L N + + +S
Sbjct: 407 LGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTL----IS 462
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IR 366
G+ + + +A V M+ + G P T+T L+ G +D
Sbjct: 463 GYSKLGNVHNAKVVL----------KMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCF 512
Query: 367 RLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ-PGVGYSADAANH-IYHLINK 424
+A+ G Y ++H L +GH ++++K++ GV A + N I
Sbjct: 513 EEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRM 572
Query: 425 GQIDAAYRIVNTLAR 439
++D A I N + R
Sbjct: 573 RKVDKAEDIFNDMVR 587
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 113/279 (40%), Gaps = 30/279 (10%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+N L V+ + DFL ++E +G EP+ VTY + LIS YC+ G ++ A
Sbjct: 252 FNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTY------NTLISCYCRKGRLDDAFY 305
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M + + AL+ G + + A + M GL P ++ L+CGY
Sbjct: 306 LYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYC 365
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEP 262
K G M ++ + + +C +LI + + SA ++ + + G+
Sbjct: 366 KEGKMRESRSLLHEMIGSG---ICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPI 422
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNG--DYLDIIHALAVSGHGEYIDEVS 319
S Y LM + G + + LL + S V G Y +I +L S D ++
Sbjct: 423 STDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKS------DSIA 476
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
+ L M ++PSA TY L+C +
Sbjct: 477 DAL---------LVKSEMGHRNIKPSAITYKALICCLCR 506
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 94/259 (36%), Gaps = 53/259 (20%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
GI PN T+ + L +CQDG+++ LE M ++ F +N LI + +
Sbjct: 244 GIHPNSYTF------NILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRK 297
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+ A + +M + + P +YT LM G K G
Sbjct: 298 GRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEG------------------------ 333
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
+ A + M GL P ++ L+CGY K G M R LL +
Sbjct: 334 -----------KVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIG 382
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
S + D + + + G+ + VSA+ V + + G+ S Y L
Sbjct: 383 SGICPD--KVTCQVLIEGYRKEARIVSALNLVVE----------LERFGVPISTDIYDYL 430
Query: 353 MCGYAKHGDMDSIRRLLAQ 371
M + G + + LL +
Sbjct: 431 MVSICEEGRPFAAKSLLQR 449
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 90/219 (41%), Gaps = 12/219 (5%)
Query: 72 VHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLI 131
V VP+ Y+ L+ + F+ L ++ +G P Y +KLI
Sbjct: 413 VELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIY------NKLI 466
Query: 132 SKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
C+ +I A + M + S + ALI + + AE ++ M Q+G+
Sbjct: 467 ESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGML 526
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
P LM Y K D+ +T + + + ++F S+ N L+ + A A +
Sbjct: 527 PDPDICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESY---NTLVKTYCEDADATRL 583
Query: 252 LTM---MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + M + G P+ QT+ +++ G K ++ + LL
Sbjct: 584 MELQDRMLKVGFAPNIQTFRQMIHGLWKAMAVEKDKLLL 622
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 89/246 (36%), Gaps = 55/246 (22%)
Query: 130 LISKYCQDGNI-EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
L+ Y ++G I EG T + + P S N L+ G + N + + M++
Sbjct: 185 LVKAYVREGMIKEGFTTFRKIVEVGCVP-SVISCNCLLNGLLKLNRIDQCWQVYKEMARV 243
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASA 248
G+ P++ T+ L + + GD+D +
Sbjct: 244 GIHPNSYTFNILTHVFCQDGDVDKVN---------------------------------- 269
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHA 305
L M + G EP TY L+ Y + G +D + R++ + Y +++
Sbjct: 270 -DFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNG 328
Query: 306 LAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
L G + E + FH M GL P ++ L+CGY K G M
Sbjct: 329 LCKEGK---VREAHQL-------FH-----RMIHRGLNPDIVSFNTLICGYCKEGKMRES 373
Query: 366 RRLLAQ 371
R LL +
Sbjct: 374 RSLLHE 379
>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 819
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 168/416 (40%), Gaps = 70/416 (16%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
GE V ++ YN L+ + F ++ + P+ VTY L++ K+
Sbjct: 268 GEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKF 327
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ A +L M K F +E VFNALI G+S+ +M A + M+ GL+P+A
Sbjct: 328 ------DEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNA 381
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL-------------LILV 241
T+ L+ G+ + M+ Q+E L + L+N+ L+
Sbjct: 382 VTHNTLLQGFCRTNQME-----------QAEQVL--EYLLSNVLSVNEDACSYVLHLLCK 428
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD----MDSVRRLLAQSGSSLVNG 297
SS SA I+ + ++ + T L+CG K G +D RL + G +
Sbjct: 429 SSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTT 488
Query: 298 DYLDIIHALAVSGH--------------GEYIDEVSAIVCFVNIC-------FHWLEGPM 336
+++ L G+ G +D +S C L+ M
Sbjct: 489 TSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKM 548
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ-NGSSLVNGDYLDIIHALAVSGH-- 393
M Q G +P TY LM G A G MD + R+L + +V Y +AL + G+
Sbjct: 549 MKQ-GFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIY---TYALMLEGYCN 604
Query: 394 GEYIDEIISKIQPGVGYSADAANHIYHLI-----NKGQIDAAYRIVNTLARSANIN 444
+ ID +S V + + +Y+++ G A+++ + + RS+NI+
Sbjct: 605 ADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAM-RSSNIH 659
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 119/287 (41%), Gaps = 26/287 (9%)
Query: 110 ESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
+ +G+ N T SN+ L+ C+ GN+E + + M ++ + +N LI+G
Sbjct: 479 DKKGLAANTTT-----SNA-LLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGC 532
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC 229
++ + A + M + G +P TY LM G A G MD + + K +
Sbjct: 533 CKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNI 592
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+++ L + + +A + + +E S Y L+ ++K G+ +L
Sbjct: 593 YTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDA 652
Query: 290 SGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSA 346
SS ++ Y IIH + + + ++E I M GL P+
Sbjct: 653 MRSSNIHPTIFTYSSIIHGMCCN---DLVEEAKGIF------------EEMRNEGLMPNV 697
Query: 347 QTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH 393
YT L+ GY K G MD I +L + S+ + + I + + + G+
Sbjct: 698 FCYTALIGGYCKLGQMDQIESILQEMTSNCIQPN--KITYTIMIDGY 742
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 108/283 (38%), Gaps = 55/283 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L++ D L + + G+ PN TY ++ YC I+
Sbjct: 556 DTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEG------YCNADRID 609
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + +S V+N LI HS+A + A + M + + P+ TY+ ++
Sbjct: 610 NAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSII 669
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS-AEGILTMMSQAGL 260
HG + +D+ A+GI M GL
Sbjct: 670 -----HG-------------------------------MCCNDLVEEAKGIFEEMRNEGL 693
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
P+ YT L+ GY K G MD + +L + S+ + + I + + + G+ + + A
Sbjct: 694 MPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPN--KITYTIMIDGYCKMGNTKEA 751
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
L M++ G+ P TYT L GY K +++
Sbjct: 752 T---------KLLNEMIAN-GISPDTVTYTVLQKGYCKENELE 784
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 17/208 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP +I Y +L Y + + + KL +E + V Y + LI+ + + G
Sbjct: 589 VP-NIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVY------NILIAAHSKAG 641
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N A K+ + MR + ++++I+G + + A+GI M GL P+ YT
Sbjct: 642 NFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYT 701
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVS-----SDMASAEGILT 253
L+ GY K G MD I++ + + C I++ + A +L
Sbjct: 702 ALIGGYCKLGQMDQIESILQEMTSN-----CIQPNKITYTIMIDGYCKMGNTKEATKLLN 756
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
M G+ P TYT L GY K +++
Sbjct: 757 EMIANGISPDTVTYTVLQKGYCKENELE 784
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V I YNAL + L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTIKSYNALFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + E M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCN-----AGKMIEARS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
IL M L P+ + + +L+ G++D+ +L
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVL 314
Score = 46.6 bits (109), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 109/280 (38%), Gaps = 28/280 (10%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVMMIDSYGKEG---IVQESVKMFQKMEELGVER 113
Query: 231 SFQLTNLL---ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+ + N L IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TIKSYNALFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D + + ++G+ A FV M +EP+
Sbjct: 174 EDMKSREISPDV--VTYNTMINGYYRVKKMEEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI 404
TYT L+ GY +D RL+ + + + Y ++ L +G I+ ++
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAGKMIEARSILKEM 281
Query: 405 QPGVGYSADAANHIYHLI-----NKGQIDAAYRIVNTLAR 439
Y A N I+ + N G +DAA ++ + R
Sbjct: 282 MD--KYLAPTDNSIFMRLISSQCNSGNLDAAADVLKAMIR 319
Score = 45.1 bits (105), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 80/440 (18%), Positives = 160/440 (36%), Gaps = 86/440 (19%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y ++G ++ + K+ + M + + +NAL + A+ M G
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEELGVERTIKSYNALFKAILRRGRYMMAKRYFNKMLSEG 145
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSDMAS 247
+EP+ T+ ++ G+ G +++ +K + S + ++ + + M
Sbjct: 146 IEPARHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRV--KKMEE 203
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
AE M +EP+ TYT L+ GY +D RL+ +
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEE------------------ 245
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
M G++P+A TY+ L+ G G M R
Sbjct: 246 -----------------------------MKGFGIKPNAITYSTLLPGLCNAGKMIEARS 276
Query: 368 LLAQNGSSLV----NGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYH 420
+L + + N ++ +I + SG+ + +++ K + +A ++ I +
Sbjct: 277 ILKEMMDKYLAPTDNSIFMRLISSQCNSGNLDAAADVL-KAMIRLSVPTEAGHYGVLIEN 335
Query: 421 LINKGQIDAAYRIVNTLARSANI----------------------NGEQLPVGGFLVRHM 458
GQ D A ++++ L I N Q LVR +
Sbjct: 336 FCKAGQYDQAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCNNGQAAKAEALVRQL 395
Query: 459 VKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVK 518
+K GV I +G D+A+ ++ + R ++ E+ LV+ +K
Sbjct: 396 LKL---GVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRR-KVDSEKSAYDS-LVQSYLK 450
Query: 519 TNQPIDKVLAVCHRLTDENL 538
N+P D A+ + +++L
Sbjct: 451 KNEPADAKAALDSMIENDHL 470
>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Brachypodium distachyon]
Length = 938
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 18/212 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI+ YN L+RV N T L ++ +GI P+ +T+ LI + + G+++
Sbjct: 698 DITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILG------HFKSGHLD 751
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M + FN L+ G A + ++ +L M + G+EPS TY L+
Sbjct: 752 NAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILV 811
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELF-LCFSFQLTNLLILVS-----SDMASAEGILTMM 255
GY K + K+ +++ E+ F +++ L+S M+ A+ + M
Sbjct: 812 TGYGKQSN------KVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEM 865
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
G+ P++ TY L+ G++K + VR+ L
Sbjct: 866 QNRGVLPTSCTYDILVSGWSKLRNGTEVRKFL 897
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 97/463 (20%), Positives = 190/463 (41%), Gaps = 69/463 (14%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
+D YN ++ + + +P LA++ +G+ + VT N+ L+ C+DG +
Sbjct: 101 VDTVSYNVVMSGF-SEQGGLAPEALLAEMCKRGVPFDAVTV-----NTVLVG-LCRDGRV 153
Query: 141 EGATKILEFM-RDKTFPISEGV-FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A + E M R + V +N+L+ G+ + DM +A + M G+ Y
Sbjct: 154 DRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYN 213
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G + G++D+ + + ++K ++ + + + + A + M +
Sbjct: 214 SLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRK 273
Query: 259 GLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHALAVSGHG--- 312
G+ P T + L+ G K G ++ R + + G++ + Y +I LA + G
Sbjct: 274 GVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNES 333
Query: 313 -EYIDEVSAIVCFVNICFH-----WL-------EGPMMSQAGLE----PSAQTYTKLMCG 355
+ EV + +++ + WL E M + L P+ TYT L+
Sbjct: 334 LSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDA 393
Query: 356 YAKHGDMDSIRRLLAQ-----------NGSSLVNGDYLDIIHALAVSGHGEYIDEIISK- 403
K G++D ++L++ SS++NG ++ V +Y+ E+ +
Sbjct: 394 LCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIING----LVKRGWVGKATDYMREMKERG 449
Query: 404 IQPGV------------GYSADAANHIYHLINKGQIDAAYRIVNTLARSANINGEQLPVG 451
I P V +AA +YH + ++ IV++L NG ++
Sbjct: 450 IDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNG-KIEKA 508
Query: 452 GFLVRHMVKTNQPGVGYSADAANH---IYHLINKGQIDAAYRI 491
L R M N+ GV D N+ I L G + AA+++
Sbjct: 509 EALFREM---NERGV--LLDHVNYTTLIDGLFKTGNLPAAFKV 546
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/397 (20%), Positives = 157/397 (39%), Gaps = 58/397 (14%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V +D+ Y AL+ D S PN VTY + LI C+ G
Sbjct: 345 VVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTY------TVLIDALCKAG 398
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N++GA ++L M +K+ + F+++I G + + A + M + G++P+ TY
Sbjct: 399 NVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYG 458
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI--LV-----SSDMASAEGI 251
++ G K ++ +L E+ LC ++ ++ LV + + AE +
Sbjct: 459 TVIDGSFKCLGQEA------ALDVYHEM-LCEGVEVNKFIVDSLVNGLKKNGKIEKAEAL 511
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSG---SSLVNGDYLDIIHA 305
M++ G+ YT L+ G K G++ + ++ L + ++V +++ +
Sbjct: 512 FREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCM 571
Query: 306 LAVSGHGE-YIDEVSA-------IVCFVNICFHWLEGPM---------MSQAGLEPSAQT 348
L S E +++E+ + + I EG M ++ ++P+ T
Sbjct: 572 LGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLIT 631
Query: 349 YTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGV 408
Y+ L+ G + G ++ + LL + SS + L L G D I+
Sbjct: 632 YSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLIL------- 684
Query: 409 GYSADAANHIYHLINKGQIDAAYRIVNTLARSANING 445
I+ + + A + NTL R NG
Sbjct: 685 --------EIHEWMMNAGLCADITVYNTLVRVLCYNG 713
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 132/338 (39%), Gaps = 34/338 (10%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQG--IEPNRVTYQQLISNSKL 130
T EL D+ Y+ LL+ D + D L + G P+ V Y S +
Sbjct: 172 RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAY------STV 225
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
I + ++G++ A + + M + P ++++++ +A M AE L M G+
Sbjct: 226 IDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGV 285
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
P+ TY L+ GY+ G ++ S L + + + + A
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 345
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
+ M+ G P+ +YT ++ GYA G DM + L+ G + + +I A A
Sbjct: 346 VFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYA 405
Query: 308 VSG--------------HGEYIDEVSAIVCFVNIC-FHWLEGPM-----MSQAGLEPSAQ 347
G HG D V+ +C ++ M M G+ P
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 465
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDII 385
Y L+ G+ HG + + L+++ + NG +LDI+
Sbjct: 466 AYHCLIQGFCTHGSLLKAKELISE---IMNNGMHLDIV 500
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 63/330 (19%), Positives = 137/330 (41%), Gaps = 41/330 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+ L++ + + + ++++ + G+ + V + +I+N C+ G + A
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN------LCKLGRVMDAQN 520
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I + + + V++ L+ G+ M A + M AG+EP+ Y L+ GY
Sbjct: 521 IFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC 580
Query: 206 KHGDMD---SIKTKI--PSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQ 257
K G +D S+ ++ +KP + L+ N++I + A+ M++
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILY--------NIIIDGLFEAGRTVPAKVKFHEMTE 632
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
+G+ + TY ++ G K+ D L + + V + + + +A ++E
Sbjct: 633 SGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEE 692
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA--QNG-- 373
+ F +I S++GL P TY+ ++ K G ++ + + QN
Sbjct: 693 AKDL--FASI----------SRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGC 740
Query: 374 ---SSLVNGDYLDIIHALAVSGHGEYIDEI 400
S L+N +++ + G Y+ +I
Sbjct: 741 EPDSRLLNHVVRELLKKNEIVRAGAYLSKI 770
>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 104/293 (35%), Gaps = 60/293 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN L+ VY F ++E G+ PN VTY I + ++G +
Sbjct: 237 DIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHG------FSREGRMR 290
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
AT++ ++D + + LI G+ + ND+ A + +M G P TY ++
Sbjct: 291 EATRLFREIKDDV-TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSIL 349
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+ G + A +LT MS +E
Sbjct: 350 RKLCEDG-----------------------------------RIREANRLLTEMSGKKIE 374
Query: 262 PSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P T L+ Y K DM S V++ + +SG L Y +IH E E
Sbjct: 375 PDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKE- 433
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
E M + G P TY+ L+ G+ D I +LL +
Sbjct: 434 --------------ELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 83/198 (41%), Gaps = 12/198 (6%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN++LR ++ L ++ + IEP+ +T L I+ YC+ ++ A K
Sbjct: 345 YNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL------INAYCKIEDMVSAVK 398
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + + + ALI+G + ++ +A+ L M + G P TY+ L+ G+
Sbjct: 399 VKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFY 458
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS---AEGILTMMSQAGLEP 262
D I + + + LC L LI + A+ + M + GL
Sbjct: 459 NQNKQDEITKLLEEFEKRG---LCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVG 515
Query: 263 SAQTYTKLMCGYAKHGDM 280
+ +T + Y + G +
Sbjct: 516 DSVIFTTMAYAYWRTGKV 533
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 58/304 (19%), Positives = 110/304 (36%), Gaps = 59/304 (19%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFL-AKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
P D+SH + L +Y + + + ++ S G++P+ L + + L++ +
Sbjct: 129 PEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPH------LQACTVLLNSLVKQR 182
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ KI + M + V+N L++ S++ D AE +L+ M + G+ P TY
Sbjct: 183 LTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYN 242
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ Y K +S F S Q M ++
Sbjct: 243 TLISVYCK----------------KSMHFEALSVQ-------------------DRMERS 267
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY--ID 316
G+ P+ TY + G+++ G M RL + + + + + G+ ID
Sbjct: 268 GVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANH---VTYTTLIDGYCRMNDID 324
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
E + +M G P TY ++ + G + RLL +
Sbjct: 325 EALRL------------REVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKK 372
Query: 377 VNGD 380
+ D
Sbjct: 373 IEPD 376
>gi|297795313|ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 711
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 109/284 (38%), Gaps = 36/284 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNALL+ Y+ ++++E +G+ P+ TY S LI Y G E A
Sbjct: 344 YNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTY------SLLIDAYVNAGRWESARI 397
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M + VF+ L+ G+ + +L M G++P Q Y ++ +
Sbjct: 398 VLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 457
Query: 206 KHGDMDSIKTKI---------PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
K +D T P + L C +++ AE + M
Sbjct: 458 KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV---------AEEMFEAME 508
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
+ G P A TY ++ Y D ++RLL + S + + + H V +G+
Sbjct: 509 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV--VTHTTLVDVYGKSGR 566
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
AI C M GL+PS+ Y L+ YA+ G
Sbjct: 567 FNDAIECLEE----------MKSVGLKPSSTMYNALINAYAQRG 600
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 72/186 (38%), Gaps = 41/186 (22%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ Y D E L K++SQGI PN VT+ + L+ Y + G A +
Sbjct: 519 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTH------TTLVDVYGKSGRFNDAIE 572
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
LE M+ S ++NALI ++Q A +M+ GL+PS L+ +
Sbjct: 573 CLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFG 632
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ + +E F +L M + G++P
Sbjct: 633 ED-------------RRDAEAF----------------------AVLQYMKENGVKPDVV 657
Query: 266 TYTKLM 271
TYT LM
Sbjct: 658 TYTTLM 663
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 95/253 (37%), Gaps = 28/253 (11%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+IS G A + E +R +NAL+ G+ + + AE +++ M + G
Sbjct: 312 IISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRG 371
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSD 244
+ P TY+ L+ Y G +S + + + +P S +F + L+ D
Sbjct: 372 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVF--------SRLLAGYRD 423
Query: 245 MASAEG---ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD 301
+ +L M G++P Q Y ++ + K +D + S + D
Sbjct: 424 RGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPD--R 481
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+ + H ++ + A F M + G P A TY ++ Y
Sbjct: 482 VTWNTLIDCHCKHGRHIVAEEMF----------EAMERRGCLPCATTYNIMINSYGDQER 531
Query: 362 MDSIRRLLAQNGS 374
D ++RLL + S
Sbjct: 532 WDDMKRLLGKMKS 544
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 52/306 (16%), Positives = 116/306 (37%), Gaps = 43/306 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN------------------ 127
YNAL+ N + ++++ G + + V Y +I +
Sbjct: 202 YNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQSLTRCNKIDSVMLQRLYKE 261
Query: 128 -------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAND 174
+ +I + + G+ A ++L + ++I + +
Sbjct: 262 IERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANSGR 321
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234
AE + + Q+G++P + Y L+ GY K G + + + ++ + ++ L
Sbjct: 322 TLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSL 381
Query: 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSL 294
+ + SA +L M ++P++ +++L+ GY G+ ++L + S
Sbjct: 382 LIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIG 441
Query: 295 VNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMC 354
V D + + + G++ A+ F M+S+ G+EP T+ L+
Sbjct: 442 VKPDRQ--FYNVVIDTFGKFNCLDHAMTTF---------DRMLSE-GIEPDRVTWNTLID 489
Query: 355 GYAKHG 360
+ KHG
Sbjct: 490 CHCKHG 495
Score = 43.5 bits (101), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 25/221 (11%)
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKP---QSELFLCFSFQLTNLLILVSSDMASAEGIL 252
TY L+ A++ D++ I ++ QS+ F+ +S + +L D + +
Sbjct: 201 TYNALIGACARNNDIEKALNLISRMRQDGYQSD-FVNYSLVIQSLTRCNKIDSVMLQRLY 259
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVS 309
+ + LE Q ++ G+AK GD +LL +G S + II ALA S
Sbjct: 260 KEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGLSAKTATLVSIISALANS 319
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G + A F + Q+G++P + Y L+ GY K G + ++
Sbjct: 320 GR-----TLEAEALFEE----------LRQSGIKPRTKAYNALLKGYVKTGPLKDAELMV 364
Query: 370 AQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPG 407
++ V+ D Y +I A +G E ++ +++ G
Sbjct: 365 SEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETG 405
>gi|326507622|dbj|BAK03204.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 435
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 116/322 (36%), Gaps = 78/322 (24%)
Query: 79 VPLDISHYNA----LLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
VP SH NA L+ + N + + L + G+ PN V+Y ++
Sbjct: 118 VPAFCSHSNATFHALIHCLVCNGRVDAARNMLPRAAKLGVRPNAVSYNIILKG------L 171
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C GA +L+ M + + FN L+ Q D+ +AE + M + G+ P+A
Sbjct: 172 CGRDGSAGARVVLDEMLGRGVRPTVVTFNTLVGAACQEGDVGAAEQLKEEMVRRGVSPNA 231
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY+ LM G G D K ++
Sbjct: 232 VTYSLLMRGLCDAGRQDDAKK-----------------------------------LMFD 256
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
M G + A Y LM YA+ GD+DSVR LL+ + D Y +I L SG
Sbjct: 257 MEYQGCQTEAVNYGVLMSAYARQGDVDSVRGLLSDMRKRKLGPDDASYNVLIKCLCDSGK 316
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
E + A+V M + G PSA TY L G + GD
Sbjct: 317 VE--EAHKALV------------EMQLKDGTVPSAATYRVLADGCCRAGDF--------- 353
Query: 372 NGSSLVNGDYLDIIHALAVSGH 393
G L + +A+ SGH
Sbjct: 354 -------GLGLRVFNAMLASGH 368
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 29/243 (11%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
+L V + YN +L+ + + L ++ +G+ P VT+ L+ +
Sbjct: 151 RAAKLGVRPNAVSYNIILKGLCGRDGSAGARVVLDEMLGRGVRPTVVTFNTLVGAA---- 206
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
CQ+G++ A ++ E M + + ++ L+ G A A+ ++ M G +
Sbjct: 207 --CQEGDVGAAEQLKEEMVRRGVSPNAVTYSLLMRGLCDAGRQDDAKKLMFDMEYQGCQT 264
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE--- 249
A Y LM YA+ GD+DS++ + ++ + L N+LI D E
Sbjct: 265 EAVNYGVLMSAYARQGDVDSVRGLLSDMRKRK---LGPDDASYNVLIKCLCDSGKVEEAH 321
Query: 250 -GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
++ M + G PSA TY L G + GD G L + +A+
Sbjct: 322 KALVEMQLKDGTVPSAATYRVLADGCCRAGDF----------------GLGLRVFNAMLA 365
Query: 309 SGH 311
SGH
Sbjct: 366 SGH 368
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 93/263 (35%), Gaps = 50/263 (19%)
Query: 158 SEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI 217
S F+ALI+ + +A +L ++ G+ P+A +Y ++ G + +
Sbjct: 125 SNATFHALIHCLVCNGRVDAARNMLPRAAKLGVRPNAVSYNIILKGLCGRDGSAGARVVL 184
Query: 218 PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
+ + +F D+ +AE + M + G+ P+A TY+ LM G
Sbjct: 185 DEMLGRGVRPTVVTFNTLVGAACQEGDVGAAEQLKEEMVRRGVSPNAVTYSLLMRGLCDA 244
Query: 278 GDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
G D ++L+ M
Sbjct: 245 GRQDDAKKLMFD-----------------------------------------------M 257
Query: 338 SQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHG 394
G + A Y LM YA+ GD+DS+R LL+ + D Y +I L SG
Sbjct: 258 EYQGCQTEAVNYGVLMSAYARQGDVDSVRGLLSDMRKRKLGPDDASYNVLIKCLCDSGKV 317
Query: 395 EYIDEIISKIQPGVGYSADAANH 417
E + + ++Q G AA +
Sbjct: 318 EEAHKALVEMQLKDGTVPSAATY 340
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 124/308 (40%), Gaps = 40/308 (12%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
GE + I +N+L+ + N L ++ G+EPN VTY + L++ Y
Sbjct: 553 GEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTY------TTLMNVY 606
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C++GN++ ++L M+ K + + +I G + + + +L M GL P
Sbjct: 607 CEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQ 666
Query: 195 QTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMA 246
+Y ++ + K DM K + +L+P S + N+LI V D+
Sbjct: 667 VSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTY--------NILINGFCVYGDLK 718
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV---RRLLAQSGSSLVNGDYLDII 303
A+ +L + + + YT ++ + GD+D R + + G + DY +I
Sbjct: 719 DADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVI 778
Query: 304 HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
L + E C MM G+ P + L+ + + G ++
Sbjct: 779 GRLCKRC---LVTEAKYFFC------------MMLSDGVCPDQDLFEVLLNAFHQCGHLN 823
Query: 364 SIRRLLAQ 371
S LLA+
Sbjct: 824 SEFELLAE 831
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 105/262 (40%), Gaps = 53/262 (20%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I Y + GN A K+ + + +K + FN+L+YG ++ A +L + G
Sbjct: 532 MIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHG 591
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELF------LCFSFQLTNLL 238
LEP+A TYT LM Y + G+M S+ + K ++ P + LC ++L
Sbjct: 592 LEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESC 651
Query: 239 ILV------------------------SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
L+ + DM A + M LEP++ TY L+ G+
Sbjct: 652 QLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGF 711
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
+GD+ LL + VN + Y II A G D A+V F
Sbjct: 712 CVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKG-----DVDKAVVYF------- 759
Query: 332 LEGPMMSQAGLEPSAQTYTKLM 353
M + G E S + Y+ ++
Sbjct: 760 ---RQMVEKGFEVSIRDYSAVI 778
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 112/283 (39%), Gaps = 48/283 (16%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ + K+ +G PN VTY + LI +CQ GN+E A K+ + M F +S
Sbjct: 372 NIIQKMLIKGPNPNLVTY------TVLICGHCQIGNVEEALKLYKEMISHGFQLSIISST 425
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IKTKIPS- 219
L+ ++ + A + M GL P TY+ L+ G K G++ + K+ S
Sbjct: 426 VLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSN 485
Query: 220 -LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ P S + L ++ A + + L Y ++ GY K G
Sbjct: 486 RIIPNSLIHGAILMGLCE-----KGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRG 540
Query: 279 DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
+ +L Q G ++ IV F ++ + + +S
Sbjct: 541 NTREAVKLYKQLGEKGIS----------------------PTIVTFNSLMYGFCINRKLS 578
Query: 339 QA----------GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
QA GLEP+A TYT LM Y + G+M S+ LL++
Sbjct: 579 QARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSE 621
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 41/301 (13%)
Query: 72 VHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLI 131
V +L+ + I YN+LL + H+ D +++ G T Q ++S ++
Sbjct: 203 VKMKDLNFIVSIQTYNSLL---YNLRHSNIMWDVYNEIKVSG------TPQSEYTSSIVV 253
Query: 132 SKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
C+ + A + K F S FN ++ + + + A+ MM + GL
Sbjct: 254 DGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLL 313
Query: 192 PSAQTYTKLMCGYAKHGDMDS---IKTKIPS--LKPQSELF--LCFSFQLTNLLILVSSD 244
P A +Y L+ G G M +K + + L+P + L F+L L+
Sbjct: 314 PDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLI------ 367
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIH 304
A I+ M G P+ TYT L+CG+ + G+++ +L + S +G L II
Sbjct: 368 -NGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMIS---HGFQLSIIS 423
Query: 305 ALAVSG---HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+ + G +D + C M GL P TY+ L+ G K G+
Sbjct: 424 STVLLGSLCKSRQVDVAFKLFC------------EMEANGLRPDLITYSTLIHGLCKQGE 471
Query: 362 M 362
+
Sbjct: 472 V 472
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 36/270 (13%)
Query: 100 FSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISE 159
F+ D + K ++ +E + +TY + +IS YC+ +E A + E M F
Sbjct: 220 FNIDDRIKKDDNLNLEADLITY------TTIISTYCKQHGLEEARALYEEMIINGFLPDV 273
Query: 160 GVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS 219
+++++ G + ++ A+ +L M + G++P+ YT L+ K G + +
Sbjct: 274 VTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAG------SAWEA 327
Query: 220 LKPQSELFL-CFSFQLTNLLILV-----SSDMASAEGILTMMSQAGLEPSAQTYTKLMCG 273
QS+L + + L LV SS AE + +S+ L P++ TYT L+ G
Sbjct: 328 FACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDG 387
Query: 274 YAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFH 330
Y K GDM+ V LL + +N + Y II+ G +DE +N+
Sbjct: 388 YCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKG---ILDEA------INVMKK 438
Query: 331 WLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
L+ ++ P+A Y L+ GY K G
Sbjct: 439 MLDQNII------PNAYVYAILIDGYCKAG 462
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 125/309 (40%), Gaps = 45/309 (14%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E +P D+ YN L+ L++ + + + +E G+ PN+ TY + +I YC
Sbjct: 546 EKSIPFDVVTYNVLINGLLEHGKYEAKSVYSGMIE-MGLAPNQATY------NIMIKAYC 598
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G ++ A ++ M+ S N L+ G S+A ++ A +L MS G+ P+
Sbjct: 599 KQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLV 658
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM---ASAEGIL 252
+ L+ +K G +++ L ++ L + + N LI+V + A +L
Sbjct: 659 IHRVLLNASSKSGKANAVLQMHEQL---VDMGLKINQEAYNNLIVVFCRLRMTKKATSVL 715
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII--------- 303
M + G TY L+ GY + V++ LA L G +I+
Sbjct: 716 KYMIRDGFVADTVTYNALIRGYCESS---HVKKALATYTQMLNEGVSPNIVTYNLLLGGL 772
Query: 304 -HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
A ++ E D+ M + GL P A TY L+ GY K G+
Sbjct: 773 LGAGLMAERDELFDK-------------------MKENGLNPDASTYDTLISGYGKIGNK 813
Query: 363 DSIRRLLAQ 371
RL +
Sbjct: 814 KESIRLYCE 822
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 114/273 (41%), Gaps = 35/273 (12%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
D L + PN +TY + LI YC+ G++E +L+ M +K + ++
Sbjct: 364 DMFRALSKLNLIPNSITY------TALIDGYCKVGDMERVESLLQEMEEKHINPNVITYS 417
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIP 218
++I G+++ + A ++ M + P+A Y L+ GY K G + + K+
Sbjct: 418 SIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLS 477
Query: 219 SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
LK + LF L M AE +L ++ GL YT LM G+ K G
Sbjct: 478 GLKVNNVLFDVLVNNLKR-----GKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAG 532
Query: 279 DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG---HGEYIDEVSAIVCFVNICFHWLEGP 335
+ ++ + + D + + + ++G HG+Y E ++
Sbjct: 533 KESAALNMVEEMTEKSIPFDV--VTYNVLINGLLEHGKY--EAKSVY------------S 576
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
M + GL P+ TY ++ Y K G++D+ L
Sbjct: 577 GMIEMGLAPNQATYNIMIKAYCKQGELDNALEL 609
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 24/238 (10%)
Query: 70 FSVHTGELDVPLDISH--YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN 127
+H +D+ L I+ YN L+ V+ T T L + G + VTY LI
Sbjct: 677 LQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRG 736
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
YC+ +++ A M ++ + +N L+ G A MA + + M +
Sbjct: 737 ------YCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKE 790
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL-CFSFQLTNLLILVSS--- 243
GL P A TY L+ GY K G+ K S++ E+ F + + +L+S
Sbjct: 791 NGLNPDASTYDTLISGYGKIGN------KKESIRLYCEMVAQGFVPKTSTYNVLISDFAK 844
Query: 244 --DMASAEGILTMMSQAGLEPSAQTYTKLMCGY---AKHGDMD-SVRRLLAQSGSSLV 295
M A +L M G+ PS+ TY L+CG+ +KH D+D +++++ +L+
Sbjct: 845 VGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSKHPDLDRTLKKIYRTDAKNLI 902
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 165/407 (40%), Gaps = 56/407 (13%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
+DV +D YN ++ + + FL+ I + T I+ + L+ +C+
Sbjct: 71 VDVEVDTVTYNTVIWGFCQHGLVNQAFGFLS------IMVKKDTCFDTITCNILVKGFCR 124
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
G + +I++ + FN LI G+ +A +M+ A ++ M + GL +
Sbjct: 125 IGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVS 184
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL-----ILVSSDMASAEGI 251
Y L+ G+ K G+ D K+ + + + F + + + + + +D+ + I
Sbjct: 185 YNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTI 244
Query: 252 L-TMMSQAGLE---------------PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV 295
+ T Q GLE P TY+ ++ G K G + + LL + V
Sbjct: 245 ISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGV 304
Query: 296 NGD---YLDIIHALAVSGHG------EYIDEVSAIVCFVNICFHWLEGPM---------- 336
+ + Y +I +L +G + V + + +C ++G
Sbjct: 305 DPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAED 364
Query: 337 ----MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALA 389
+S+ L P++ TYT L+ GY K GDM+ + LL + +N + Y II+
Sbjct: 365 MFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYT 424
Query: 390 VSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 436
G +DE I+ ++ + + ++Y ++ G A + + T
Sbjct: 425 KKG---ILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIAT 468
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 111/285 (38%), Gaps = 21/285 (7%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
DV ++ + AL+ Y N + LA+++ + + PN +TY +I+ C
Sbjct: 104 DVEWNVYSFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINA-------CAK 156
Query: 138 GNI--EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G + EG + MR + +N L+ S + A + M++AG+ P +
Sbjct: 157 GGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSI 216
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
TY L+ Y + + + + ++ ++ + + +A + M
Sbjct: 217 TYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQM 276
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
+AG P T++ L+ Y KHG D VR L D + V G G +
Sbjct: 277 QEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFF 336
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
E +N+ + L+G G+EP TY L+ K G
Sbjct: 337 QES------INLFWDLLDG------GVEPDMSTYAGLLYSCGKGG 369
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 107/285 (37%), Gaps = 30/285 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN LL + G+ P+ +TY + L+ Y Q E
Sbjct: 179 DIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITY------NALVDIYGQADRHE 232
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
G ++L M +N LI + +A +A + M +AG P T++ L+
Sbjct: 233 GVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLL 292
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM---MSQA 258
Y KHG D ++ +K + ++ N LI V + + + +
Sbjct: 293 EAYGKHGCYDEVRLLFTDMKERGTEPDVNTY---NTLIQVFGQGGFFQESINLFWDLLDG 349
Query: 259 GLEPSAQTYTKLM--CGYAK-HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
G+EP TY L+ CG H + R + QS + + +I A +G
Sbjct: 350 GVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITA-----YGN-- 402
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+A+ F+ M ++G +P +TY L+ +A G
Sbjct: 403 ---AALYSEATYAFN-----SMKESGCKPDLETYNALIGAHAGGG 439
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 116/274 (42%), Gaps = 38/274 (13%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
QG+ P+R+T+ LIS + +++ E +I M ++ + +N LI + +
Sbjct: 219 QGMSPDRITFNTLISAAGRANRW------EECDRIFAEMEERGIARDDVTYNTLIATYCR 272
Query: 172 ANDMASAEGIL-TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS--ELFL 228
M ++ TM +G+EPS TY+ ++ GYAK G ++ Q+ +
Sbjct: 273 GGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGI 332
Query: 229 CFSFQLTNLLILVSSDMAS---AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
C+ N ++ + + + + A I M +AG TY L+ Y K G
Sbjct: 333 CY-----NTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMS 387
Query: 286 LL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
LL Q G+S Y +I A HG + D A+ F ++ +AGL
Sbjct: 388 LLEEMKQRGASPNILTYSALIDAYC--KHGFHRD---AMALFQDV----------KKAGL 432
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLL---AQNG 373
+P Y+ L+ G K+G D LL A NG
Sbjct: 433 QPDVVLYSTLVDGCCKNGSPDEALALLEEMADNG 466
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 82/215 (38%), Gaps = 7/215 (3%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKL-ESQGIEPNRVTYQQLISNSKLISKY 134
E + D YN L+ Y + + +S GIEP+ +TY S +I Y
Sbjct: 253 ERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITY------STMIDGY 306
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G A + + MR++ +N ++ H++ + A I M +AG
Sbjct: 307 AKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDI 366
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY L+ Y K G + + +K + ++ A +
Sbjct: 367 VTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQD 426
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ +AGL+P Y+ L+ G K+G D LL +
Sbjct: 427 VKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEE 461
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 12/176 (6%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
++ +Q +EP+ + Y + ++ + + GN + A I M + F +NA
Sbjct: 318 LFQEMRNQNVEPDGICY------NTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNA 371
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSIKTKIPSLK 221
L+ + + A +L M Q G P+ TY+ L+ Y KHG D ++ +
Sbjct: 372 LLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAG 431
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
Q ++ L +S + S D A A +L M+ G+ P+ TY L+ Y +
Sbjct: 432 LQPDVVL-YSTLVDGCCKNGSPDEALA--LLEEMADNGIRPNVITYNSLLDAYGRQ 484
Score = 47.8 bits (112), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 98/252 (38%), Gaps = 29/252 (11%)
Query: 115 EPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAND 174
+PN V Y +I + G+ A +I M ++ FN LI +AN
Sbjct: 187 KPNLVVYNAVIDACS------KGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANR 240
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL---FLCFS 231
+ I M + G+ TY L+ Y + G M + ++ S + + +S
Sbjct: 241 WEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYS 300
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLA 288
+ L + A A + M +EP Y ++ +A+ G+ D S+RR +
Sbjct: 301 TMIDGYAKLGLAHEAIA--LFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAME 358
Query: 289 QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
++G + Y ++ + G++ + +S + M Q G P+ T
Sbjct: 359 EAGFAKDIVTYNALLDSYG--KQGKFREAMSLL-------------EEMKQRGASPNILT 403
Query: 349 YTKLMCGYAKHG 360
Y+ L+ Y KHG
Sbjct: 404 YSALIDAYCKHG 415
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 149/371 (40%), Gaps = 43/371 (11%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K+ G PN +TY LI YC+ GN+ A ++LE M+ + LI
Sbjct: 437 KMLKAGSSPNVITYNTLIYG------YCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELIS 490
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G S+ + A + M + G+ P+ TYT ++ GY +D + L
Sbjct: 491 GFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL- 549
Query: 228 LCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
S Q N++I ++ ++ AE M + GL P+ TYT + G ++G
Sbjct: 550 --PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607
Query: 285 RLLAQ-----------SGSSLVNG----------DYLDIIHALAVSGHGEYIDEVSAIV- 322
++ + + SSL+ G + +++ L G +D + +V
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVK 667
Query: 323 --CFVNICFHWLEGPM-MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN---GSSL 376
C C+ + + M + GL+PS + Y L+ G K+ ++S + G L
Sbjct: 668 GLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727
Query: 377 VNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIY--HLINKGQIDAAYRIV 434
DY +I AL E I + S + A + L+ +G+ D +++
Sbjct: 728 HLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLL 787
Query: 435 NTL-ARSANIN 444
+ + +R+ +N
Sbjct: 788 HVMESRNCTLN 798
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 115/303 (37%), Gaps = 77/303 (25%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDK---------TFPI- 157
++ G +PN VTY S LI+ C +G +E A +LE M K T P+
Sbjct: 262 RMVKDGCDPNSVTY------STLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315
Query: 158 --------SEGV-----------------FNALIYGHSQANDMASAEGILTMMSQAGLEP 192
SE V F ALI G S+ A G+ M GL P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375
Query: 193 SAQTYTKLMCGYAKHGDMDSIKT---------KIPSLKPQSELFLCFSFQLTNLLILVSS 243
+ TY L+ G ++ T +PS + +E+ CF
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM---------G 426
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YL 300
D+ A I M +AG P+ TY L+ GY K G++++ RLL + + D Y
Sbjct: 427 DIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYT 486
Query: 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
++I + G E+ A F M + G+ P+ TYT ++ GY
Sbjct: 487 ELISGFSRGGKLEH-----ATSLFYG----------MMEHGISPNHVTYTAIIDGYFNLA 531
Query: 361 DMD 363
+D
Sbjct: 532 KVD 534
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 53/251 (21%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K+ + G+ P VTY + LI++ C +G E A I ++M S +N +I
Sbjct: 367 KMLADGLVPTTVTY------NALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIK 420
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
D+ A I M +AG P+ TY L+ GY K G+++
Sbjct: 421 CFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLN---------------- 464
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+A +L +M GL+P A TYT+L+ G+++ G ++ L
Sbjct: 465 -------------------NAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF 505
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
++ ++ + + + G+ A+ F W M ++G PS+Q
Sbjct: 506 YGMMEHGISPNH--VTYTAIIDGYFNLAKVDDALALF------W----KMVESGNLPSSQ 553
Query: 348 TYTKLMCGYAK 358
TY ++ G++K
Sbjct: 554 TYNVMISGFSK 564
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 111/290 (38%), Gaps = 63/290 (21%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ + +F K+ QG+ PN +TY + I C++G A K
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY------TSFIDGLCRNGRTGLAFK 608
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAE--GILTMMSQAGLEPSAQTYTKLMCG 203
I M + + + +++LIYG Q AE +L ++ G EP+ TYT L+ G
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
G C+ A+ ++ M + GL+PS
Sbjct: 669 LCGEGR-------------------CY----------------EADQLVVSMQKKGLQPS 693
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVC 323
+ Y L+ G K+ ++S L+I +++ G ++ + A++C
Sbjct: 694 EEIYRALLIGECKNLKVESA----------------LNIFYSMDTLGFQLHLSDYKALIC 737
Query: 324 FVNICFHWLEGPMMSQAGLEPSAQT----YTKLMCGYAKHGDMDSIRRLL 369
+ E + Q LE + +T L+ G K G+ D +LL
Sbjct: 738 ALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLL 787
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 136/360 (37%), Gaps = 54/360 (15%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
PN TY + LI +C++ N++ A + + M + ++ LI G +
Sbjct: 235 PNAFTY------TSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCF 230
A +L M Q G+EP+ TYT + G K K P + F
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF--- 345
Query: 231 SFQLTNLLILVSSD--MASAEGILTMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSVRR 285
T L+ +S D A G+ M GL P+ TY L +C + ++ +
Sbjct: 346 ----TALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFK 401
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ GS Y +II + G D A+V F M +AG P+
Sbjct: 402 WMLSHGSLPSTQTYNEIIKCFCLMG-----DIQKAMVIF----------DKMLKAGSSPN 446
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIIS 402
TY L+ GY K G++++ RLL NG Y ++I + G E+ +
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506
Query: 403 KIQPGVGYSADAANHIYH------LINKGQIDAAYRIVNTLARSANINGEQ---LPVGGF 453
G+ + NH+ + N ++D A + + S N+ Q + + GF
Sbjct: 507 ----GMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGF 562
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 120/301 (39%), Gaps = 29/301 (9%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E V D+ +N L+ + + +ES ++P VTY +IS C
Sbjct: 90 EFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG------LC 143
Query: 136 QDGNIEGATKILEFMRDKTFPISEGV--FNALIYGHSQANDMASAEGILTMMSQAGLEPS 193
+ GN+E A ++LE M K + + +N LI +A+ + A M AG+ P
Sbjct: 144 KSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPD 203
Query: 194 AQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
T L+ G K GD++ + +K + ++ + V+ + A IL
Sbjct: 204 VLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILK 263
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSG 310
MS P T+ L+ G+ K G + +L + + D Y +++ L G
Sbjct: 264 TMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVG 320
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
V + F+ LE + + G P YT L+ G K G+++ +L+
Sbjct: 321 Q-------------VQVAFYLLEE--IVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVK 365
Query: 371 Q 371
+
Sbjct: 366 E 366
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 150/378 (39%), Gaps = 56/378 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN LL + + + H F L G PN VT++ LI + C+ G
Sbjct: 26 DVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGN------CKAGQ-- 77
Query: 142 GATKILEFMRD-KTFPISEGV--FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
A + LEF+R F ++ V FN LI+G + + A + M + ++P TY
Sbjct: 78 -AMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYN 136
Query: 199 KLMCGYAKHGDMDSIKTKIPSL---KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
++ G K G+++ + + + +S + L N +S + A M
Sbjct: 137 TVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYR-ASRIREACAFREKM 195
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG-----DYLDIIHALAVSG 310
AG+ P T L+ G K GD++ +L G L Y IIHAL V+G
Sbjct: 196 KAAGINPDVLTCNILVSGICKDGDVEEALEIL--DGMKLAGPVPDVITYNSIIHALCVAG 253
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
+ E + I + P T+ L+ G+ K G + +L
Sbjct: 254 K---VVEAAEI---------------LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLE 295
Query: 371 QNGSSLVNGD---YLDIIHALAVSGHGE----YIDEIISKIQPGVGYSADAANH---IYH 420
+ + D Y +++ L G + ++EI+ + GY D + +
Sbjct: 296 EMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQ-----GYIPDVIAYTSLVDG 350
Query: 421 LINKGQIDAAYRIVNTLA 438
L G+I+ A+++V ++
Sbjct: 351 LCKSGEIEEAHKLVKEMS 368
Score = 40.4 bits (93), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 74/186 (39%), Gaps = 8/186 (4%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN +L + + ++ L ++G P+ VTY LI C+ + A
Sbjct: 414 YNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDG------LCKANRVREACD 467
Query: 146 ILEFMRDK-TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
+ + M + FP ++ ++++G + + A ++ MS+ P+ YT L+ G
Sbjct: 468 LADEMASRGCFP-NDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGL 526
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
K MD + +++ Q F+++ + + +A A + M G P
Sbjct: 527 CKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDG 586
Query: 265 QTYTKL 270
T L
Sbjct: 587 STSKTL 592
>gi|414888270|tpg|DAA64284.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 890
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 114/298 (38%), Gaps = 39/298 (13%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H V D++ YN LL L + G+ P+ V+Y+ ++
Sbjct: 263 HDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVD------ 316
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ GN+ A ++ M + L+ H++ A A +L M G P
Sbjct: 317 AFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAP 376
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLK----PQSELFLCFSFQLTNLLILVSSDMASA 248
+A TY L+ Y + G D ++ ++ P + + N+L V D
Sbjct: 377 TAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTATY--------NVLFRVFGDGGFF 428
Query: 249 EGILTM---MSQAGLEPSAQTYTKLM--CGYAK-HGDMDSVRRLLAQSGSSLVNGDYLDI 302
+ ++ + M + G++P T +M CG+ HGD V + + G Y +
Sbjct: 429 KEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGL 488
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
+ AL GH +E A V F MM++ G P+ +TY L YA+ G
Sbjct: 489 VEAL---GHAAMYEE--AYVAF----------NMMTEIGSLPTLETYNALAFAYARGG 531
Score = 44.3 bits (103), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 99/250 (39%), Gaps = 26/250 (10%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD----MDSIKTKI 217
+ +LI +++ A +L M G+ P+A TY ++ A+ D D +
Sbjct: 199 YTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVPFDMLLGLF 258
Query: 218 PSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
++ + + N L+ V S +E +L M +AG+ P +Y ++ +
Sbjct: 259 AEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAF 318
Query: 275 AKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
A G++ L +A +G + YL ++ A + G D V+ +
Sbjct: 319 ASAGNLSRAAELFSEMAATGHTADASAYLGLMEAH--TRVGATADAVAVL---------- 366
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVS 391
M G P+A TY L+ Y + G D +R+L + ++ V D V
Sbjct: 367 ---RQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFRVF 422
Query: 392 GHGEYIDEII 401
G G + E++
Sbjct: 423 GDGGFFKEVV 432
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 114/286 (39%), Gaps = 35/286 (12%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
L +G+ N + Y S LI YC+ G ++ A + E M K + FNALI+G
Sbjct: 388 LTEEGVSANVIMY------SVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHG 441
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL 228
A ++ A + M + GL+P+ T+ L+ K GD D + + E +
Sbjct: 442 LCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPV 501
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
++ + + + AE ++ M + G+ P TYT L+ Y K G S +L
Sbjct: 502 ARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVL- 560
Query: 289 QSGSSLVNGD-------YLDIIHAL----------------AVSGHGEYIDEVSAIVCFV 325
S+ + D +L +I L +VS G+ +
Sbjct: 561 ---KSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEF 617
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+I E M + G P ++ Y KL+ G K ++ +LL Q
Sbjct: 618 DIVIELFEE--MEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQ 661
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 128/330 (38%), Gaps = 54/330 (16%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI------------- 125
V +DI +N ++ VY F+ K+ G+ P+ T I
Sbjct: 188 VSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAF 247
Query: 126 ------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
S ++LI C+ G I+ A + M+D + + ALI G + N
Sbjct: 248 RVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN 307
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK-----PQSELFL 228
+ A G+L M + L P TY L+ G + G +DS + +K P +
Sbjct: 308 -VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYG 366
Query: 229 CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
CF L S+ + A + +++ G+ + Y+ L+ GY K G +D L
Sbjct: 367 CFIDFLCK-----SNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFE 421
Query: 289 QSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ S + + + +IH L +G+ + E ++ M + GL+P+
Sbjct: 422 KMLSKNCSPNAYTFNALIHGLCSAGN---LKEALSLF------------DQMVKMGLKPT 466
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
T+ L+ K GD D + L + SS
Sbjct: 467 VYTFNILIGRMLKQGDFDDAHKCLQKMMSS 496
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 116/282 (41%), Gaps = 25/282 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y AL++ L ++ L ++ + + P+ +TY LI+ C+ G+++
Sbjct: 292 NVYTYTALIKG-LCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQ------CRAGHLD 344
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M+++ + + I ++N + A + +++ G+ + Y+ L+
Sbjct: 345 SAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLI 404
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K G +D + ++ ++F + + ++ A + M + GL+
Sbjct: 405 DGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLK 464
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P+ T+ L+ K GD D + L + SG V Y I +G + +++
Sbjct: 465 PTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDM 524
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
M + G+ P TYT L+ Y K G
Sbjct: 525 MV---------------QMKEEGVPPDDFTYTSLIKAYGKLG 551
Score = 47.0 bits (110), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 105/286 (36%), Gaps = 54/286 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+NAL+ + ++ G++P T+ + LI + + G+ + A K
Sbjct: 435 FNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTF------NILIGRMLKQGDFDDAHK 488
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
L+ M +NA I + A + AE ++ M + G+ P TYT L+ Y
Sbjct: 489 CLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYG 548
Query: 206 KHG----DMDSIKTKIPS-LKPQSELFLCFSFQLTNLLILVS----------SDMASAEG 250
K G D +K+ + +P FL QL + +V S+ G
Sbjct: 549 KLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPG 608
Query: 251 --------------ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ------S 290
+ M + G P ++ Y KL+ G K ++ +LL Q S
Sbjct: 609 SNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGIS 668
Query: 291 GSSLV-------------NGDYLDIIHALAVSGHGEYIDEVSAIVC 323
S +V G+ +I+ + SGH ++ ++C
Sbjct: 669 PSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLIC 714
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 126/321 (39%), Gaps = 57/321 (17%)
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
FN +I + + + A+ + M QAGL P T T + GY + D+DS +
Sbjct: 194 TFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEM 253
Query: 221 KPQSE---------------------LFL------CFS--FQLTNLLI-LVSSDMASAEG 250
++E LF+ C+ + T L+ L ++ A G
Sbjct: 254 PNRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMG 313
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALA 307
+L M + L P TY L+ G + G +DS RLL+ + G Y I L
Sbjct: 314 LLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLC 373
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS--- 364
S ++E + +++ G+ + Y+ L+ GY K G +D
Sbjct: 374 KSNR---VEEARRLF------------DSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGC 418
Query: 365 -IRRLLAQNGSSLVNGDYLD-IIHALAVSGH-GEYIDEIISKIQPGVGYSADAAN-HIYH 420
++L++N S N + +IH L +G+ E + ++ G+ + N I
Sbjct: 419 LFEKMLSKNCSP--NAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGR 476
Query: 421 LINKGQIDAAYRIVNTLARSA 441
++ +G D A++ + + S
Sbjct: 477 MLKQGDFDDAHKCLQKMMSSG 497
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ ++E G P+ Y+ KLIS C+ N+ A K+L+ M+ + SE VFN
Sbjct: 622 ELFEEMEKHGCTPDSKCYE------KLISGICKVENLGIALKLLDQMQKEGISPSEMVFN 675
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 211
A+I + A I+ M +G P + L+CG + G+ +
Sbjct: 676 AVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETE 723
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 116/274 (42%), Gaps = 38/274 (13%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
QG+ P+R+T+ LIS + +++ E +I M ++ + +N LI + +
Sbjct: 218 QGMSPDRITFNTLISAAGRANRW------EECDRIFAEMEERGIARDDVTYNTLIATYCR 271
Query: 172 ANDMASAEGIL-TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS--ELFL 228
M ++ TM +G+EPS TY+ ++ GYAK G ++ Q+ +
Sbjct: 272 GGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGI 331
Query: 229 CFSFQLTNLLILVSSDMAS---AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
C+ N ++ + + + + A I M +AG TY L+ Y K G
Sbjct: 332 CY-----NTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMS 386
Query: 286 LL---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
LL Q G+S Y +I A HG + D A+ F ++ +AGL
Sbjct: 387 LLEEMKQRGASPNILTYSALIDAYC--KHGFHRD---AMALFQDV----------KKAGL 431
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLL---AQNG 373
+P Y+ L+ G K+G D LL A NG
Sbjct: 432 QPDVVLYSTLVDGCCKNGSPDEALALLEEMADNG 465
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 82/215 (38%), Gaps = 7/215 (3%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKL-ESQGIEPNRVTYQQLISNSKLISKY 134
E + D YN L+ Y + + +S GIEP+ +TY S +I Y
Sbjct: 252 ERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITY------STMIDGY 305
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ G A + + MR++ +N ++ H++ + A I M +AG
Sbjct: 306 AKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDI 365
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY L+ Y K G + + +K + ++ A +
Sbjct: 366 VTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQD 425
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ +AGL+P Y+ L+ G K+G D LL +
Sbjct: 426 VKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEE 460
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 12/176 (6%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
++ +Q +EP+ + Y + ++ + + GN + A I M + F +NA
Sbjct: 317 LFQEMRNQNVEPDGICY------NTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNA 370
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSIKTKIPSLK 221
L+ + + A +L M Q G P+ TY+ L+ Y KHG D ++ +
Sbjct: 371 LLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAG 430
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
Q ++ L +S + S D A A +L M+ G+ P+ TY L+ Y +
Sbjct: 431 LQPDVVL-YSTLVDGCCKNGSPDEALA--LLEEMADNGIRPNVITYNSLLDAYGRQ 483
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 98/252 (38%), Gaps = 29/252 (11%)
Query: 115 EPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAND 174
+PN V Y +I + G+ A +I M ++ FN LI +AN
Sbjct: 186 KPNLVVYNAVIDACS------KGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANR 239
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL---FLCFS 231
+ I M + G+ TY L+ Y + G M + ++ S + + +S
Sbjct: 240 WEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYS 299
Query: 232 FQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLA 288
+ L + A A + M +EP Y ++ +A+ G+ D S+RR +
Sbjct: 300 TMIDGYAKLGLAHEAIA--LFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAME 357
Query: 289 QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
++G + Y ++ + G++ + +S + M Q G P+ T
Sbjct: 358 EAGFAKDIVTYNALLDSYG--KQGKFREAMSLL-------------EEMKQRGASPNILT 402
Query: 349 YTKLMCGYAKHG 360
Y+ L+ Y KHG
Sbjct: 403 YSALIDAYCKHG 414
>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
Length = 696
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 24/248 (9%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ YN ++ ++ + + +++ +G PN VT+ LIS Y + GN+
Sbjct: 433 VMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISG------YSKLGNVHN 486
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A +L+ + + F F +LI G + + A M++ G+ P+AQTY LM
Sbjct: 487 AKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMH 546
Query: 203 GYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
G ++ K KI + P + +SF L + AE I M +
Sbjct: 547 TLCSAGHVNKAIDLLNKMKIDGVTPDA-----YSFNALILSFCRMRKVDKAEDIFNDMVR 601
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNG-DYLDIIHALAVSGH-- 311
G+ P + TY L+ ++ + +L +SG S N Y I+ ALA G
Sbjct: 602 FGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFS 661
Query: 312 --GEYIDE 317
GE +D+
Sbjct: 662 EAGELMDK 669
Score = 46.2 bits (108), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 144/375 (38%), Gaps = 64/375 (17%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++E +GI PN TY L+ +C G +E A ++L+ M++K SE + L++
Sbjct: 248 QMEGEGIRPNVFTYTMLVDG------FCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVH 301
Query: 168 GHSQANDMASAEGILT--MMSQAGLEPSAQTYTKLMC--------------------GY- 204
G + + A +L+ + + L PSA +T L C GY
Sbjct: 302 GVFRCLERDKAYRMLSDWLGHETSLHPSA-CHTMLYCLSKKDMAKEAVEFAKRMSARGYL 360
Query: 205 ---AKHGDMDSIKTKIPSLKPQSELFLCF-------SFQLTNLLI---LVSSDMASAEGI 251
G + S K + EL F F + ++I L + + A
Sbjct: 361 LDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHY 420
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAVS 309
L M GL S +Y ++ + K G +D ++ Q L N + + +S
Sbjct: 421 LGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTL----IS 476
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IR 366
G+ + + +A V M+ + G P T+T L+ G +D
Sbjct: 477 GYSKLGNVHNAKVVL----------KMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCF 526
Query: 367 RLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ-PGVGYSADAANH-IYHLINK 424
+A+ G Y ++H L +GH ++++K++ GV A + N I
Sbjct: 527 EEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRM 586
Query: 425 GQIDAAYRIVNTLAR 439
++D A I N + R
Sbjct: 587 RKVDKAEDIFNDMVR 601
>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 696
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 104/248 (41%), Gaps = 24/248 (9%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ YN ++ ++ + + +++ +G PN VT+ LIS Y + GN+
Sbjct: 433 VMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTLISG------YSKLGNVHN 486
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A +L+ + + F F +LI G + + A M++ G+ P+AQTY LM
Sbjct: 487 AKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMH 546
Query: 203 GYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
G ++ K KI + P + +SF L + AE I M +
Sbjct: 547 TLCSAGHVNKAIDLLNKMKIDGVTPDA-----YSFNALILSFCRMRKVDKAEDIFNDMVR 601
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNG-DYLDIIHALAVSGH-- 311
G+ P + TY L+ ++ + +L +SG S N Y I+ ALA G
Sbjct: 602 FGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSGCSTSNNQSYWPIVAALAKMGQFS 661
Query: 312 --GEYIDE 317
GE +D+
Sbjct: 662 EAGELMDK 669
Score = 46.2 bits (108), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 144/375 (38%), Gaps = 64/375 (17%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
++E +GI PN TY L+ +C G +E A ++L+ M++K SE + L++
Sbjct: 248 QMEGEGIRPNVFTYTMLVDG------FCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVH 301
Query: 168 GHSQANDMASAEGILT--MMSQAGLEPSAQTYTKLMC--------------------GY- 204
G + + A +L+ + + L PSA +T L C GY
Sbjct: 302 GVFRCLERDKAYRMLSDWLGHETSLHPSA-CHTMLYCLSKKDMAKEAVEFEKRMSARGYL 360
Query: 205 ---AKHGDMDSIKTKIPSLKPQSELFLCF-------SFQLTNLLI---LVSSDMASAEGI 251
G + S K + EL F F + ++I L + + A
Sbjct: 361 LDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLNCKNFSKANHY 420
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAVS 309
L M GL S +Y ++ + K G +D ++ Q L N + + +S
Sbjct: 421 LGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGFLPNLVTFNTL----IS 476
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IR 366
G+ + + +A V M+ + G P T+T L+ G +D
Sbjct: 477 GYSKLGNVHNAKVVL----------KMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFVCF 526
Query: 367 RLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ-PGVGYSADAANH-IYHLINK 424
+A+ G Y ++H L +GH ++++K++ GV A + N I
Sbjct: 527 EEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNALILSFCRM 586
Query: 425 GQIDAAYRIVNTLAR 439
++D A I N + R
Sbjct: 587 RKVDKAEDIFNDMVR 601
>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 123/296 (41%), Gaps = 32/296 (10%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
PN TY LI+ + C+ G ++ A ++ M+ K ++ +FN L+ G+ + +
Sbjct: 326 PNAYTYGALINGA------CKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMI 379
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT 235
A + +M Q G E A T + G+ + + K + +++ + SF +
Sbjct: 380 DEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSIL 439
Query: 236 NLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV 295
+ + A A + +M + G PS TY + Y K G M+ +L+ + +
Sbjct: 440 IDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGL 499
Query: 296 NGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
D Y +I SG+ + E+ F+ M Q GL + TYT +
Sbjct: 500 MPDTYTYTSLIDGERASGNVDRALEL----------FN-----EMPQLGLNRNVVTYTVI 544
Query: 353 MCGYAKHGDMDSIRRLLAQ-NGSSLV--NGDYLDIIHAL-----AVSGHGEYIDEI 400
+ G +K G D +L + N +V +G Y +I +L VSG +D I
Sbjct: 545 ISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRI 600
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 134/324 (41%), Gaps = 29/324 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V +++ Y L+ Y + ++ +GIEP+ Y +I+ + C+ G
Sbjct: 254 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWN------CKFG 307
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N++ A + + M ++ + + ALI G +A +M +AE ++ M G++ + +
Sbjct: 308 NMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 367
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFL-CFSFQLTNLLILVSSDMASAEGILTMMSQ 257
LM GY K G +D ++ ++ Q + F+ + S+ A+ +L M +
Sbjct: 368 TLMDGYCKKGMIDE-ALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 426
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEY 314
G+ P+ +++ L+ Y K + RRL + + G + Y I G
Sbjct: 427 RGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK--- 483
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGS 374
++E ++ M + GL P TYT L+ G G++D L +
Sbjct: 484 MEEAYKLI------------NEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQ 531
Query: 375 SLVNGD---YLDIIHALAVSGHGE 395
+N + Y II L+ G +
Sbjct: 532 LGLNRNVVTYTVIISGLSKDGRAD 555
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 127/304 (41%), Gaps = 37/304 (12%)
Query: 75 GELDVPLDISHY-NALLRVYLDNEHTFSPTDFLAKLESQGIEPN-RVTYQQLISNSKLIS 132
GE + P + + + L RVY+DN S + +G E + R ++ L++ +
Sbjct: 109 GEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKR--- 165
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
GN+E + L M D I + A++ G + ++ A+ ++ + G +P
Sbjct: 166 ----SGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 221
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV-----SSDMAS 247
S TY L+ GY + D+ + +I SL ++ + +T +L+ SS +
Sbjct: 222 SVITYNTLLNGYIEIKDVGGV-NEILSLMEKN----VVDYNVTTYTMLIEWYSRSSKIEE 276
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNGDYL--DIIH 304
AE + M + G+EP YT ++ K G+M L + + LV Y +I+
Sbjct: 277 AEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALIN 336
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
+G E+ A VN M G++ + + LM GY K G +D
Sbjct: 337 GACKAG------EMKAAEMMVND---------MQSKGVDVNRVIFNTLMDGYCKKGMIDE 381
Query: 365 IRRL 368
RL
Sbjct: 382 ALRL 385
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 111/289 (38%), Gaps = 59/289 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN +L E K+ Q I PN VTY LI+ C+ IE A +
Sbjct: 47 YNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLING------LCKAWRIETAYE 100
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M K + +E +N LI G + D+ +A+ + M ++ P+ TYT L+ G +
Sbjct: 101 LFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLS 160
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G + A+AE +L M + G+ P+
Sbjct: 161 KSGKVQ----------------------------------AAAE-VLDGMVKKGVTPNVA 185
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TY+ L+ G+ K +D +LL Q G + Y ++++L + E
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLE--------- 236
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
F G M+Q P+ TY L+ H +D RL A+
Sbjct: 237 ----DAFKLFRG--MAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAE 279
>gi|302761606|ref|XP_002964225.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
gi|300167954|gb|EFJ34558.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
Length = 580
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 138/353 (39%), Gaps = 68/353 (19%)
Query: 84 SHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGA 143
S +AL+R++ FL + S+G++ T++ + LI C+ I+ A
Sbjct: 137 STADALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEY----NCLIEGLCKGDRIDEA 192
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
++ E MR P +N +I S+ + AE +L M ++ +P YT+++ G
Sbjct: 193 LRLYELMRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFIYTRVING 252
Query: 204 YAKHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
+ K G+ + + +K P + +F C L +S A +L + +A
Sbjct: 253 FCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCK-----TSKFDEALVVLKVSIEA 307
Query: 259 GLEPSAQTY----------------TKLMCGYAKHGDMDSVRRLL------AQSGSSLVN 296
G EP TY ++LM K G +++ +LL ++ L+
Sbjct: 308 GCEPDEVTYFKLAQERKCPATNLLYSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLG 367
Query: 297 GD--------YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQT 348
GD Y +I AL G DE +V M + G++P A
Sbjct: 368 GDGCKPDVVMYSIVIDALCAMGM---TDEGFVVV------------KAMEERGVKPDAVV 412
Query: 349 YTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDII------HALAVSGHGE 395
YT + + + +D RLL + G Y D+I AL +G E
Sbjct: 413 YTIFLYAFCRSARLDDACRLLEMMVEA---GCYPDVISYNTLLFALCSAGQEE 462
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 129/326 (39%), Gaps = 59/326 (18%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+VP DI YN ++ L +E +P++ Y +++I+ +C+
Sbjct: 203 NVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCKPDKFIY------TRVINGFCKL 256
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
GN + A +L M++ + VF+ +I G + + A +L + +AG EP TY
Sbjct: 257 GNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAGCEPDEVTY 316
Query: 198 ----------------TKLMCGYAKHGDMDSIKTKIPSL---KPQSELFL----C----- 229
++LM K G +++ + L +SE L C
Sbjct: 317 FKLAQERKCPATNLLYSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLGGDGCKPDVV 376
Query: 230 -FSFQLTNLLILVSSDMASAEG--ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+S + L + +D EG ++ M + G++P A YT + + + +D RL
Sbjct: 377 MYSIVIDALCAMGMTD----EGFVVVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRL 432
Query: 287 L---AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
L ++G Y ++ AL +G E A F +M + G+E
Sbjct: 433 LEMMVEAGCYPDVISYNTLLFALCSAGQEE-----EACRLF----------QVMVETGIE 477
Query: 344 PSAQTYTKLMCGYAKHGDMDSIRRLL 369
P+ TYT+L+ ++ R L
Sbjct: 478 PNVFTYTQLIRALCSTKKLEGARHLF 503
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 42/108 (38%), Gaps = 8/108 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN LL + GIEPN TY QLI C +E
Sbjct: 444 DVISYNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIR------ALCSTKKLE 497
Query: 142 GATKILEFMR-DKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
GA + FM+ K P E + ALI GH Q + A +L S A
Sbjct: 498 GARHLFNFMKLSKCVPDME-TYKALILGHYQNEGVREARQLLEQESDA 544
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 118/297 (39%), Gaps = 34/297 (11%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
L++ ++N LL+ + + + D ++ + P+ V+Y +I+ C+ +
Sbjct: 127 LNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVING------LCKGKRL 180
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A ++ + M+ + F+ALI G + D+ G+L M + GLE Y+ L
Sbjct: 181 VEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSAL 240
Query: 201 MCGYAKHGDMDSIKTKI-----PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
+ G+ GD++ K ++ P + C L A +L M
Sbjct: 241 ISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCK-----KQKWKEAAQMLDTM 295
Query: 256 SQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
+ + P YT L G +K+G D V L+ + G N Y II+ L G
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGR- 354
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+D+ I+ M++ G +P TY+ L+ G G +D LL
Sbjct: 355 --VDDALGIL------------ETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLL 397
Score = 47.8 bits (112), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 81/214 (37%), Gaps = 24/214 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNA++ L + +G +P+ VTY S L+ C G I+ A
Sbjct: 342 YNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTY------STLVKGLCGVGKIDEAVD 395
Query: 146 ILEFMRDKTFPISEGVF--NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+L + K F I VF N +I + + A+ + M + G + TY L+ G
Sbjct: 396 LLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDG 455
Query: 204 YAKHGDM--------DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
Y G + D++ + I P + + L + +L + A+G+
Sbjct: 456 YLSAGKLTKALELWKDAVDSGIS---PNAATYTVLINGLCKMQML-----SIAKGLFNKK 507
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+G P+ Y LM + ++ R L +
Sbjct: 508 RASGTRPTVSEYNTLMASLCRESSVEQARNLFQE 541
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 116/307 (37%), Gaps = 34/307 (11%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+ALI + A G+L ++ + G + + L+ G+ + GD +K
Sbjct: 97 LSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMK 156
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
+ C S+ + + A+ + M +P++ T++ L+ G+ K+GD++
Sbjct: 157 RNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVE 216
Query: 282 SVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE-------------VSAIVCFV 325
LL + + GD Y +I G E E V C +
Sbjct: 217 EGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLM 276
Query: 326 N-ICF--HWLEGPM----MSQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSS 375
N +C W E M+ + P YT L G +K+G D + L+ + G
Sbjct: 277 NALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEE 336
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISKIQPGV--GYSADAANH---IYHLINKGQIDAA 430
N Y II+ L G +D+ + ++ G D + + L G+ID A
Sbjct: 337 PNNVTYNAIINGLCKEGR---VDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEA 393
Query: 431 YRIVNTL 437
++N L
Sbjct: 394 VDLLNLL 400
Score = 42.4 bits (98), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 2/156 (1%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+I + C+ + A ++ M ++ FP + +N LI G+ A + A + +G
Sbjct: 417 VIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSG 476
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV-SSDMASA 248
+ P+A TYT L+ G K M SI + + K S S T + L S + A
Sbjct: 477 ISPNAATYTVLINGLCKM-QMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQA 535
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ M A +P ++ ++ G K GD++S +
Sbjct: 536 RNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAK 571
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 115/303 (37%), Gaps = 77/303 (25%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDK---------TFPI- 157
++ G +PN VTY S LI+ C +G +E A +LE M K T P+
Sbjct: 262 RMVKDGCDPNSVTY------STLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLV 315
Query: 158 --------SEGV-----------------FNALIYGHSQANDMASAEGILTMMSQAGLEP 192
SE V F ALI G S+ A G+ M GL P
Sbjct: 316 SLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVP 375
Query: 193 SAQTYTKLMCGYAKHGDMDSIKT---------KIPSLKPQSELFLCFSFQLTNLLILVSS 243
+ TY L+ G ++ T +PS + +E+ CF
Sbjct: 376 TTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLM---------G 426
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YL 300
D+ A I M +AG P+ TY L+ GY K G++++ RLL + + D Y
Sbjct: 427 DIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYT 486
Query: 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
++I + G E+ A F M + G+ P+ TYT ++ GY
Sbjct: 487 ELISGFSRGGKLEH-----ATSLFYG----------MMEHGISPNHVTYTAIIDGYFNLA 531
Query: 361 DMD 363
+D
Sbjct: 532 KVD 534
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 152/374 (40%), Gaps = 49/374 (13%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K+ G PN +TY LI YC+ GN+ A ++LE M+ + LI
Sbjct: 437 KMLKAGSSPNVITYNTLIYG------YCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELIS 490
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G S+ + A + M + G+ P+ TYT ++ GY +D + L
Sbjct: 491 GFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL- 549
Query: 228 LCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
S Q N++I ++ ++ AE M + GL P+ TYT + G ++G
Sbjct: 550 --PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAF 607
Query: 285 RLLAQ-----------SGSSLVNG----------DYLDIIHALAVSGHGEYIDEVSAIV- 322
++ + + SSL+ G + +++ L G +D + +V
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVK 667
Query: 323 --CFVNICFHWLEGPM-MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN---GSSL 376
C C+ + + M + GL+PS + Y L+ G K+ ++S + G L
Sbjct: 668 GLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727
Query: 377 VNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYH-----LINKGQIDAAY 431
DY +I AL +I+E Q + ++ ++ L+ +G+ D
Sbjct: 728 HLSDYKALICALCKEN---FIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCL 784
Query: 432 RIVNTL-ARSANIN 444
++++ + +R+ +N
Sbjct: 785 KLLHVMESRNCTLN 798
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 53/251 (21%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K+ + G+ P VTY + LI++ C +G E A I ++M S +N +I
Sbjct: 367 KMLADGLVPTTVTY------NALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIK 420
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
D+ A I M +AG P+ TY L+ GY K G+++
Sbjct: 421 CFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLN---------------- 464
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+A +L +M GL+P A TYT+L+ G+++ G ++ L
Sbjct: 465 -------------------NAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF 505
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
++ ++ + + + G+ A+ F W M ++G PS+Q
Sbjct: 506 YGMMEHGISPNH--VTYTAIIDGYFNLAKVDDALALF------W----KMVESGNLPSSQ 553
Query: 348 TYTKLMCGYAK 358
TY ++ G++K
Sbjct: 554 TYNVMISGFSK 564
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 111/290 (38%), Gaps = 63/290 (21%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ + +F K+ QG+ PN +TY + I C++G A K
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY------TSFIDGLCRNGRTGLAFK 608
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAE--GILTMMSQAGLEPSAQTYTKLMCG 203
I M + + + +++LIYG Q AE +L ++ G EP+ TYT L+ G
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
G C+ A+ ++ M + GL+PS
Sbjct: 669 LCGEGR-------------------CY----------------EADQLVVSMQKKGLQPS 693
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVC 323
+ Y L+ G K+ ++S L+I +++ G ++ + A++C
Sbjct: 694 EEIYRALLIGECKNLKVESA----------------LNIFYSMDTLGFQLHLSDYKALIC 737
Query: 324 FVNICFHWLEGPMMSQAGLEPSAQT----YTKLMCGYAKHGDMDSIRRLL 369
+ E + Q LE + +T L+ G K G+ D +LL
Sbjct: 738 ALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLL 787
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 136/360 (37%), Gaps = 54/360 (15%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
PN TY + LI +C++ N++ A + + M + ++ LI G +
Sbjct: 235 PNAFTY------TSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRL 288
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCF 230
A +L M Q G+EP+ TYT + G K K P + F
Sbjct: 289 EEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTF--- 345
Query: 231 SFQLTNLLILVSSD--MASAEGILTMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSVRR 285
T L+ +S D A G+ M GL P+ TY L +C + ++ +
Sbjct: 346 ----TALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFK 401
Query: 286 LLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ GS Y +II + G D A+V F M +AG P+
Sbjct: 402 WMLSHGSLPSTQTYNEIIKCFCLMG-----DIQKAMVIF----------DKMLKAGSSPN 446
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIIS 402
TY L+ GY K G++++ RLL NG Y ++I + G E+ +
Sbjct: 447 VITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFY 506
Query: 403 KIQPGVGYSADAANHIYH------LINKGQIDAAYRIVNTLARSANINGEQ---LPVGGF 453
G+ + NH+ + N ++D A + + S N+ Q + + GF
Sbjct: 507 ----GMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGF 562
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 87/218 (39%), Gaps = 25/218 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L+ L + + + L G+EP+ +TY I C+ G +E
Sbjct: 182 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDG------LCKAGRVE 235
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L+ M +K NA+I G + + AE +L+ M G P+A ++ L+
Sbjct: 236 DALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLI 295
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELF------LCFSFQLTNLLILVSSDMASAEG 250
CG + G T + KP + LC + Q + A
Sbjct: 296 CGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQ--------EGRIKEAIT 347
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
+ M + G P TY+ L+ G K G +D RRLL
Sbjct: 348 LFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLG 385
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 120/311 (38%), Gaps = 57/311 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNALL + ++ G P+ VTY L+ +C+ G ++ A K
Sbjct: 13 YNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHG------FCKVGELDEALK 66
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I + + F +NALI G +A+ + A+ IL M L P TY L+ G
Sbjct: 67 IFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLC 126
Query: 206 KHGDMDSIKTKI--------------------PSLKPQSELFLCFSFQLT---------- 235
K+G +D + I L+ SE F L
Sbjct: 127 KNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTY 186
Query: 236 NLLI--LVSSDMAS-AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
N+LI L+ D + A + + + + GLEP A TYT + G K G ++ +L
Sbjct: 187 NILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDE 246
Query: 293 SLVNGDYLDII-HALAVSG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTY 349
G D++ H ++G + +DE + L G M G P+A ++
Sbjct: 247 K---GCVPDVVSHNAVINGLCKEKRVDEAEVL----------LSG--MEAKGCSPNAISF 291
Query: 350 TKLMCGYAKHG 360
L+CG + G
Sbjct: 292 NTLICGQCRAG 302
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 124/320 (38%), Gaps = 44/320 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQL----------------- 124
D+ YNAL+ + + L ++ S+ + P+ VTY L
Sbjct: 79 DVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLI 138
Query: 125 ---------ISNSKLISKYCQD-GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAND 174
I+ S LIS C++ + A K+ + + + +N LI G + +
Sbjct: 139 VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDR 198
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234
+ A + + + + GLEP A TYT + G K G ++ + + + + S
Sbjct: 199 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNA 258
Query: 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD----MDSVRRLLAQS 290
+ + AE +L+ M G P+A ++ L+CG + G M + + +L +
Sbjct: 259 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 318
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYT 350
V Y ++ L + I E AI F M + G P TY+
Sbjct: 319 VKPTVV-TYNILVDGLCKARQEGRIKE--AITLF----------DAMIEKGRVPDVVTYS 365
Query: 351 KLMCGYAKHGDMDSIRRLLA 370
L+ G K G +D RRLL
Sbjct: 366 ALIDGLGKAGKLDDARRLLG 385
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 98/246 (39%), Gaps = 43/246 (17%)
Query: 150 MRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 209
MR F + +NAL+ G M+ A+ + M +AG P TY L+ G+ K G+
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 210 MDSI---------KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+D + +P + + L F + + A+ IL M L
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFC---------KADKLDEAQRILQRMVSENL 111
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSG--------SSLVNG---------DYLDII 303
P TY L+ G K+G +D R L+ G S+L++G + L +
Sbjct: 112 VPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLF 171
Query: 304 HALAVSGHGEYIDEVSAIV------CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
++ G+ + + ++ VN F G + + GLEP A TYT + G
Sbjct: 172 GSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSG--LVKHGLEPDAITYTVFIDGLC 229
Query: 358 KHGDMD 363
K G ++
Sbjct: 230 KAGRVE 235
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 18/134 (13%)
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII- 303
M+ A+ + M +AG P TY L+ G+ K G++D ++ ++ G D++
Sbjct: 26 MSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFD---GAVKRGFVPDVVT 82
Query: 304 HALAVSG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+ ++G + +DE I+ M L P TY L+ G K+G
Sbjct: 83 YNALINGFCKADKLDEAQRIL------------QRMVSENLVPDVVTYNSLVNGLCKNGR 130
Query: 362 MDSIRRLLAQNGSS 375
+D R L+ G S
Sbjct: 131 VDEARMLIVDKGFS 144
>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 140/351 (39%), Gaps = 51/351 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+ L+ N + + + ++ S IE N V YQ +I+ C+ G A +
Sbjct: 515 YSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIING------LCKVGQTSKARE 568
Query: 146 ILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
+L M +K F +S +N++I G + +M A M G+ P+ TYT LM G
Sbjct: 569 LLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGL 628
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
K+ MD +K + ++ S+M SA + + + + GL PS
Sbjct: 629 CKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQ 688
Query: 265 QTYTKLMCGYAKHGDM----DSVRRLLAQSGSSLVNGDYLDIIHALAVSGH--------- 311
Y L+ G+ G+M D +++L + G G Y +I L G+
Sbjct: 689 PVYNSLISGFRNLGNMVAALDLYKKML-KDGLRCDLGTYTTLIDGLLKEGNLILASDLYT 747
Query: 312 -----GEYIDEVSAIVC---------FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
G DE+ V FV + + E M + + P+ Y ++ G+
Sbjct: 748 EMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEE---MKKNNVTPNVLIYNAVIAGHY 804
Query: 358 KHGDMDSIRRLLAQ--NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQP 406
+ G++D RL + + L +G DI+ VSG + K QP
Sbjct: 805 REGNLDEAFRLHDEMLDKGILPDGATFDIL----VSGK-------VGKFQP 844
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 113/522 (21%), Positives = 203/522 (38%), Gaps = 59/522 (11%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ +++ +L+ + N S D K+E++G PN VT+ S LI ++ ++G
Sbjct: 334 ISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTF------SVLIERFSKNG 387
Query: 139 NIEGATKILEFMRD-KTFPISEGVFN--ALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+E K LEF + ++ ++ VF+ +I G + A + + GL +
Sbjct: 388 EME---KALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVF 443
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
++ K G +D + ++ + S+ L +M A + + M
Sbjct: 444 ICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNM 503
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS--LVNG-DYLDIIHALAVSGHG 312
+ GL+P+ TY+ L+ G K+ D +V ++ Q SS VNG Y II+ L G
Sbjct: 504 LEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQT 563
Query: 313 EYIDEVSAIVC----FVNICFHW--------LEGPM---------MSQAGLEPSAQTYTK 351
E+ A + F C + EG M M G+ P+ TYT
Sbjct: 564 SKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTS 623
Query: 352 LMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISK-IQPG 407
LM G K+ MD +R + G L Y +IH + E + S+ ++ G
Sbjct: 624 LMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEG 683
Query: 408 VGYSADAANH-IYHLINKGQIDAAYRIVNTLAR----------SANINGEQLPVGGFLVR 456
+ S N I N G + AA + + + + I+G L G ++
Sbjct: 684 LNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG-LLKEGNLILA 742
Query: 457 HMVKTNQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSANINGEQLPVGGFLV 513
+ T VG D + + L KGQ ++ + ++ N+ L +
Sbjct: 743 SDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKN-NVTPNVLIYNAVIA 801
Query: 514 RHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLK 555
H + N +D+ + + D+ + P +L+ V K
Sbjct: 802 GHYREGN--LDEAFRLHDEMLDKGILPDGATFDILVSGKVGK 841
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 133/323 (41%), Gaps = 29/323 (8%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
P++ TY +I S + GN+E A + + M ++ +LI GH + ND+
Sbjct: 301 PSQETYTSVILAS------VKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDL 354
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT 235
SA + M G P++ T++ L+ ++K+G+M+ + K L L S
Sbjct: 355 GSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEK---ALEFYKKMESLGLTPSVFHV 411
Query: 236 NLLILVSSDMASAEGILTMMSQAGLEPSAQTY--TKLMCGYAKHGDMDSVRRLLAQSGSS 293
+ +I E L + ++ A + ++ K G +D LL + S
Sbjct: 412 HTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKMESR 471
Query: 294 LVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
+ + + + + + +D + F N M + GL+P+ TY+ L+
Sbjct: 472 GIGPNVVSYNNVMLAHCRKKNMDLARTV--FSN----------MLEKGLKPNNYTYSILI 519
Query: 354 CGYAKHGDMDSIRRLLAQNGSS--LVNG-DYLDIIHALAVSGHGEYIDEIISKIQPGVGY 410
G K+ D ++ ++ Q SS VNG Y II+ L G E+++ + +
Sbjct: 520 DGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRF 579
Query: 411 SADAANH---IYHLINKGQIDAA 430
++ I I +G++D A
Sbjct: 580 CVSCMSYNSIIDGFIKEGEMDYA 602
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 146/363 (40%), Gaps = 29/363 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNA+L V L + ++++ G+ +R +Y + +I+ YC+ G A
Sbjct: 187 YNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSY------NTVIALYCKKGMRYEAMC 240
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + +N+LI+G + + A + T M+ A P TYT L+ GY
Sbjct: 241 VRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYC 300
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G+++ ++ L ++ + M +L M + ++
Sbjct: 301 RAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHV 360
Query: 266 TYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
T L+ Y K G M S V++ + +SG L Y +IH + +DE A
Sbjct: 361 TCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFC---KAKELDE--AKE 415
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL---LAQNGSSLVNG 379
F M AG P+ ++ L+ G+ K + D++ + L + G
Sbjct: 416 AFFQ----------MVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKA 465
Query: 380 DYLDIIHALAVSGHGEYIDEIISKIQPG--VGYSADAANHIYHLINKGQIDAAYRIVNTL 437
Y +I L G + ++ ++Q VG S A Y + +G+ AA ++ +
Sbjct: 466 VYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNTLDGM 525
Query: 438 ARS 440
A++
Sbjct: 526 AKN 528
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 126/310 (40%), Gaps = 30/310 (9%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VPLD YN ++ +Y + +++ +GI + VT+ LI C+ G
Sbjct: 215 VPLDRFSYNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHG------LCKYG 268
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A ++ M + LI G+ +A ++ A + M G+ P TY
Sbjct: 269 RVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYN 328
Query: 199 KL---MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGIL 252
+ +C K +++ + ++ K Q++ C N LI M SA +
Sbjct: 329 AILRKLCEDGKMKEVNQLLNEMDERKVQADHVTC------NTLINAYCKRGHMTSACKVK 382
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHG 312
M ++GL+ + TY L+ G+ K ++D + Q + + +Y + + V G
Sbjct: 383 KKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNY--SVFSWLVDGFC 440
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN 372
+ + + ++ + +M + GL P Y L+ + G +D +++ Q
Sbjct: 441 KKNNADAVLL---------IPDELMKR-GLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQM 490
Query: 373 GSSLVNGDYL 382
S + GD L
Sbjct: 491 QSKGLVGDSL 500
Score = 47.4 bits (111), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 142/344 (41%), Gaps = 49/344 (14%)
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A ++ + M +S V+NA+++ +A D A AE ++T M AG+ +Y ++
Sbjct: 168 ARRVFDEMARAGLAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIA 227
Query: 203 GYAKHG---DMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQ 257
Y K G + ++ ++ E + +L+ + + A + T M+
Sbjct: 228 LYCKKGMRYEAMCVRDRM-----DKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAA 282
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNG--DYLDIIHALAVSGHGEY 314
A P TYT L+ GY + G+++ +L + + ++ G Y I+ L G +
Sbjct: 283 AQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKE 342
Query: 315 IDEV-----------SAIVCFVNICFHWLEGPM---------MSQAGLEPSAQTYTKLMC 354
++++ + C I + G M M ++GL+ + TY L+
Sbjct: 343 VNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIH 402
Query: 355 GYAKHGDMDSIRRLLAQNGSSLVNGDYLD---IIHALAVSGHGEYI----DEIISKIQPG 407
G+ K ++D + Q + + +Y ++ + + + DE++ +
Sbjct: 403 GFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKR---- 458
Query: 408 VGYSADAANH---IYHLINKGQIDAAYRIVNTLARSANINGEQL 448
G D A + I L KG +D A ++ + + +S + G+ L
Sbjct: 459 -GLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQM-QSKGLVGDSL 500
Score = 47.4 bits (111), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 99/272 (36%), Gaps = 21/272 (7%)
Query: 128 SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQ 187
S L+ Q A ++ + MR + AL+ ++A A+A + M++
Sbjct: 118 SWLVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFDEMAR 177
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS 247
AGL S Y ++ K GD + + + FS+ L
Sbjct: 178 AGLAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKGMRYE 237
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIH 304
A + M + G+ T+ L+ G K+G + +L + ++ D Y +I
Sbjct: 238 AMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLID 297
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
+G+ I+E L G M G+ P TY ++ + G M
Sbjct: 298 GYCRAGN---IEEAVK-----------LRGE-MEATGMLPGVATYNAILRKLCEDGKMKE 342
Query: 365 IRRLLAQNGSSLVNGDYL---DIIHALAVSGH 393
+ +LL + V D++ +I+A GH
Sbjct: 343 VNQLLNEMDERKVQADHVTCNTLINAYCKRGH 374
>gi|10177016|dbj|BAB10204.1| maize crp1 protein-like [Arabidopsis thaliana]
Length = 680
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 108/284 (38%), Gaps = 36/284 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNALL+ Y+ ++++E +G+ P+ TY S LI Y G E A
Sbjct: 313 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY------SLLIDAYVNAGRWESARI 366
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M + VF+ L+ G + +L M G++P Q Y ++ +
Sbjct: 367 VLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFG 426
Query: 206 KHGDMDSIKTKI---------PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
K +D T P + L C +++ AE + M
Sbjct: 427 KFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV---------AEEMFEAME 477
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
+ G P A TY ++ Y D ++RLL + S + + + H V +G+
Sbjct: 478 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV--VTHTTLVDVYGKSGR 535
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
AI C M GL+PS+ Y L+ YA+ G
Sbjct: 536 FNDAIECLEE----------MKSVGLKPSSTMYNALINAYAQRG 569
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 72/186 (38%), Gaps = 41/186 (22%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ Y D E L K++SQGI PN VT+ + L+ Y + G A +
Sbjct: 488 YNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTH------TTLVDVYGKSGRFNDAIE 541
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
LE M+ S ++NALI ++Q A +M+ GL+PS L+ +
Sbjct: 542 CLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFG 601
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ + +E F +L M + G++P
Sbjct: 602 ED-------------RRDAEAF----------------------AVLQYMKENGVKPDVV 626
Query: 266 TYTKLM 271
TYT LM
Sbjct: 627 TYTTLM 632
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 93/250 (37%), Gaps = 22/250 (8%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+IS G A + E +R +NAL+ G+ + + AE +++ M + G
Sbjct: 281 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 340
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
+ P TY+ L+ Y G +S + + ++ F F +
Sbjct: 341 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 400
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD----SVRRLLAQS-GSSLVNGDYLDIIH 304
+L M G++P Q Y ++ + K +D + R+L++ V + L H
Sbjct: 401 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 460
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
HG +I + E M + G P A TY ++ Y D
Sbjct: 461 C----KHGRHI-----------VAEEMFEA--MERRGCLPCATTYNIMINSYGDQERWDD 503
Query: 365 IRRLLAQNGS 374
++RLL + S
Sbjct: 504 MKRLLGKMKS 513
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/306 (17%), Positives = 118/306 (38%), Gaps = 43/306 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY----QQLISNSK------------ 129
YNAL+ N + +AK+ G + + V Y Q L ++K
Sbjct: 171 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKE 230
Query: 130 ---------------LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAND 174
+I + + G+ A ++L + ++I + +
Sbjct: 231 IERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGR 290
Query: 175 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234
AE + + Q+G++P + Y L+ GY K G + ++ + ++ + ++ L
Sbjct: 291 TLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSL 350
Query: 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSL 294
+ + SA +L M ++P++ +++L+ G+ G+ ++L + S
Sbjct: 351 LIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIG 410
Query: 295 VNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMC 354
V D + + + G++ A+ F M+S+ G+EP T+ L+
Sbjct: 411 VKPDRQ--FYNVVIDTFGKFNCLDHAMTTF---------DRMLSE-GIEPDRVTWNTLID 458
Query: 355 GYAKHG 360
+ KHG
Sbjct: 459 CHCKHG 464
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 94/253 (37%), Gaps = 54/253 (21%)
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
+NALI ++ ND+ A ++ M Q G + Y+ ++ + +DS+
Sbjct: 170 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSV------- 222
Query: 221 KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
L L + D LE Q ++ G+AK GD
Sbjct: 223 ------------MLLRLYKEIERD--------------KLELDVQLVNDIIMGFAKSGDP 256
Query: 281 DSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMM 337
+LL +G S + II ALA SG + A F +
Sbjct: 257 SKALQLLGMAQATGLSAKTATLVSIISALADSGR-----TLEAEALFEE----------L 301
Query: 338 SQAGLEPSAQTYTKLMCGYAKHG---DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHG 394
Q+G++P + Y L+ GY K G D +S+ + + G S Y +I A +G
Sbjct: 302 RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRW 361
Query: 395 EYIDEIISKIQPG 407
E ++ +++ G
Sbjct: 362 ESARIVLKEMEAG 374
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 141/370 (38%), Gaps = 64/370 (17%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y +L+ + N + + ++ G +PN VTY S LI+ C +G +E
Sbjct: 236 DTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTY------SALINGLCSEGRLE 289
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +LE M DK + + I A A +L M + G P+ QTYT L+
Sbjct: 290 EAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALI 349
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G ++ G + A G+ M GL
Sbjct: 350 SGLSRDGKFE-----------------------------------VAIGVYHKMLADGLV 374
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQ--SGSSLVNGD-YLDIIHALAVSGHGEYIDEV 318
P+A TY+ L+ G ++ + S SL N + Y II G YI +
Sbjct: 375 PTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIG---YIQKA 431
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGSS 375
+AI M +AG P+ TY ++ Y K G M++ RLL NG
Sbjct: 432 TAIF------------DQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLK 479
Query: 376 LVNGDYLDIIHALAVSGHGEYIDEIISK-IQPGVGYSADAANHIYH-LINKGQIDAAYRI 433
L Y ++I + G E+ + ++ ++ G+ + N I + + ++D A +
Sbjct: 480 LDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALAL 539
Query: 434 VNTLARSANI 443
+ S N+
Sbjct: 540 FWKMVESGNV 549
Score = 63.5 bits (153), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 110/267 (41%), Gaps = 35/267 (13%)
Query: 97 EHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFP 156
EH FS ++ GI PN VTY +I+ ++K ++ A + M +
Sbjct: 499 EHAFS---LFNEMVEHGISPNVVTYNAIINGYLTVAK------VDDALALFWKMVESGNV 549
Query: 157 ISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTK 216
S G +N +I G S+ N ++ AE M + GL P+ TYT + G K+G S+ K
Sbjct: 550 PSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGR-TSLAFK 608
Query: 217 IPSLKPQSELF--LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKL---M 271
I + + F LC L + L AE +L G EP+ TYT L +
Sbjct: 609 IFHEMKKRDYFPNLCTYSSLIDGLC-QEGQAEDAERLL----DDGCEPNVDTYTTLVRGL 663
Query: 272 CGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
CG + + D + + + G +I AL V G + ++ SA+ F +
Sbjct: 664 CGKGRCYEADQLVESMKKKGLQPSE----EIYRALLV-GQCKNLEVESALKIFDS----- 713
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAK 358
M G +P Y L+C K
Sbjct: 714 -----MVTTGFQPCLSDYKALICALCK 735
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 134/341 (39%), Gaps = 58/341 (17%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN +++ + + T ++ G PN +TY + +I Y + G + A +
Sbjct: 415 YNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITY------NIIIHIYFKQGYMNNAMR 468
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY- 204
+LE M+ + + LI G S+ + A + M + G+ P+ TY ++ GY
Sbjct: 469 LLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYL 528
Query: 205 --AKHGDMDSIKTK------IPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
AK D ++ K +PS + + FS ++ ++ AE M
Sbjct: 529 TVAKVDDALALFWKMVESGNVPSSGTYNMMISGFS---------KTNRISEAENFCGKMV 579
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL-------DIIHALAVS 309
+ GL P+ TYT + G K+G ++ + + DY +I L
Sbjct: 580 KQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHE----MKKRDYFPNLCTYSSLIDGLCQE 635
Query: 310 GHGE------------YIDEVSAIV---CFVNICF---HWLEGPMMSQAGLEPSAQTYTK 351
G E +D + +V C C+ +E M + GL+PS + Y
Sbjct: 636 GQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVES--MKKKGLQPSEEIYRA 693
Query: 352 LMCGYAKHGDMDSIRRL---LAQNGSSLVNGDYLDIIHALA 389
L+ G K+ +++S ++ + G DY +I AL
Sbjct: 694 LLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALC 734
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 30/259 (11%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFM-RDKTFPISEGVFNALI 166
K+ + G+ P VTY S LI++ +G E A I E+M + P +E +N +I
Sbjct: 367 KMLADGLVPTAVTY------SALINQLYVEGRFETALTIFEWMLSHDSLPNTE-TYNVII 419
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL 226
G + A I M +AG P+ TY ++ Y K G M++ + +K
Sbjct: 420 KGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLK 479
Query: 227 FLCFSFQLTNLLILVS--SDMASAEGILTMMSQAGLEPSAQTYTKLMCGY---AKHGDMD 281
+++ NL+ S + A + M + G+ P+ TY ++ GY AK D
Sbjct: 480 LDTWTY--ANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDAL 537
Query: 282 SVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAG 341
++ + +SG+ +G Y +I + + I E N C G M+ Q G
Sbjct: 538 ALFWKMVESGNVPSSGTYNMMISGFSKTNR---ISEAE------NFC-----GKMVKQ-G 582
Query: 342 LEPSAQTYTKLMCGYAKHG 360
L P+ TYT + G K+G
Sbjct: 583 LLPNVITYTSFIDGLCKNG 601
>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ ++ E T ++ S ++PN V Y LI YC+ G +
Sbjct: 601 DVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIG------AYCRSGRLS 654
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ E M+ K + + +LI G S + + A+ +L M GLEP+ YT L+
Sbjct: 655 MALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALI 714
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K G M ++ + + ++ ++ + ++ A +L M + G+
Sbjct: 715 DGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIV 774
Query: 262 PSAQTYTKLMCGYAKHG 278
P + TY + + GY K G
Sbjct: 775 PDSITYKEFIYGYLKQG 791
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 106/277 (38%), Gaps = 57/277 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y+ L+R L+ F + G+ P+ TY S +I C+ E K
Sbjct: 570 YSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTY------SVMIDGCCKAERTEEGQK 623
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + V+N LI + ++ ++ A + M G+ P++ TYT L+ G +
Sbjct: 624 LFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 683
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ S + A+ +L M GLEP+
Sbjct: 684 -----------------------------------IISRVEEAKLLLEEMRMEGLEPNVF 708
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE--YIDEVSAIVC 323
YT L+ GY K G M V LL + S V+ + I + + + G+ + E S ++
Sbjct: 709 HYTALIDGYGKLGQMVKVECLLREMHSKNVHPN--KITYTVMIGGYARDGNVTEASRLL- 765
Query: 324 FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
M + G+ P + TY + + GY K G
Sbjct: 766 -----------HEMREKGIVPDSITYKEFIYGYLKQG 791
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 112/285 (39%), Gaps = 51/285 (17%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F K+ +G+EP +TY S L+ + I A +L+ M +K FP + V+N
Sbjct: 309 FKEKMVERGVEPTLITY------SILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNN 362
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
LI +A + A I +M GL ++ TY L+ GY K G D + + +
Sbjct: 363 LIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEM---- 418
Query: 225 ELFLCFSFQ---LTNLLILVSSD--MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD 279
L + F+ T+++ L+ S SA + M + P T L+ G KHG
Sbjct: 419 -LSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGK 477
Query: 280 MDSVRRLLAQSGSSLVNGDYL-------DIIHALA--------------VSGHGEYIDEV 318
L + +N +L ++H L + G G +D V
Sbjct: 478 HSKAVELWLK----FLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRV 533
Query: 319 SAIVCFVNIC--------FHWLEGPMMSQAGLEPSAQTYTKLMCG 355
S C F +++ M + GL+P TY+ L+ G
Sbjct: 534 SYNTLISGCCGNKKLDEAFMFMDE--MVKKGLKPDNYTYSILIRG 576
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 127/323 (39%), Gaps = 31/323 (9%)
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
I+ +C+ G +E A ++ M + + +N +I G + A M + G+
Sbjct: 259 INAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGV 318
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMAS 247
EP+ TY+ L+ G K I LK +E + + N LI + + +
Sbjct: 319 EPTLITYSILVKGLTK---AKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNK 375
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS---GSSLVNGDYLDIIH 304
A I +M GL ++ TY L+ GY K G D RLL + G ++ G + +I
Sbjct: 376 AIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVI- 434
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
L S H D V G M+ + + P T L+ G KHG
Sbjct: 435 CLLCSHH--MFDSALRFV-----------GEMLLR-NMSPGGGLLTTLISGLCKHGKHSK 480
Query: 365 IRRLLAQ--NGSSLVNGDYLD-IIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---I 418
L + N LV+ + ++H L +G E I +I G G+ D ++ I
Sbjct: 481 AVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEIL-GRGFVMDRVSYNTLI 539
Query: 419 YHLINKGQIDAAYRIVNTLARSA 441
++D A+ ++ + +
Sbjct: 540 SGCCGNKKLDEAFMFMDEMVKKG 562
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/273 (19%), Positives = 106/273 (38%), Gaps = 20/273 (7%)
Query: 126 SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM 185
+++ L+ C+ G +E +I + + + F + +N LI G + A + M
Sbjct: 499 TSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEM 558
Query: 186 SQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM 245
+ GL+P TY+ L+ G ++ K + +++ + +
Sbjct: 559 VKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERT 618
Query: 246 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDI 302
+ + M L+P+ Y L+ Y + G + +R + G S + Y +
Sbjct: 619 EEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSL 678
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
I +++ ++E ++ M GLEP+ YT L+ GY K G M
Sbjct: 679 IKGMSIISR---VEEAKLLL------------EEMRMEGLEPNVFHYTALIDGYGKLGQM 723
Query: 363 DSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGE 395
+ LL + S V+ + I + + + G+
Sbjct: 724 VKVECLLREMHSKNVHPN--KITYTVMIGGYAR 754
>gi|414888267|tpg|DAA64281.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 873
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 125/326 (38%), Gaps = 42/326 (12%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H V D++ YN LL L + G+ P+ V+Y+ ++
Sbjct: 241 HDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVD------ 294
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ GN+ A ++ M + L+ H++ A A +L M G P
Sbjct: 295 AFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAP 354
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLK----PQSELFLCFSFQLTNLLILVSSDMASA 248
+A TY L+ Y + G D ++ ++ P + + N+L V D
Sbjct: 355 TAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTATY--------NVLFRVFGDGGFF 406
Query: 249 EGILTM---MSQAGLEPSAQTYTKLM--CGYAK-HGDMDSVRRLLAQSGSSLVNGDYLDI 302
+ ++ + M + G++P T +M CG+ HGD V + + G Y +
Sbjct: 407 KEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGL 466
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG-- 360
+ AL GH +E A V F MM++ G P+ +TY L YA+ G
Sbjct: 467 VEAL---GHAAMYEE--AYVAF----------NMMTEIGSLPTLETYNALAFAYARGGLF 511
Query: 361 -DMDSIRRLLAQNGSSLVNGDYLDII 385
+ ++I ++ N + D D +
Sbjct: 512 QEAEAIFSRMSNNAGIQKSKDSFDAL 537
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 99/250 (39%), Gaps = 26/250 (10%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD----MDSIKTKI 217
+ +LI +++ A +L M G+ P+A TY ++ A+ D D +
Sbjct: 177 YTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVPFDMLLGLF 236
Query: 218 PSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
++ + + N L+ V S +E +L M +AG+ P +Y ++ +
Sbjct: 237 AEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAF 296
Query: 275 AKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
A G++ L +A +G + YL ++ A + G D V+ +
Sbjct: 297 ASAGNLSRAAELFSEMAATGHTADASAYLGLMEAH--TRVGATADAVAVL---------- 344
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVS 391
M G P+A TY L+ Y + G D +R+L + ++ V D V
Sbjct: 345 ---RQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFRVF 400
Query: 392 GHGEYIDEII 401
G G + E++
Sbjct: 401 GDGGFFKEVV 410
>gi|115483719|ref|NP_001065521.1| Os11g0103000 [Oryza sativa Japonica Group]
gi|77548314|gb|ABA91111.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644225|dbj|BAF27366.1| Os11g0103000 [Oryza sativa Japonica Group]
Length = 543
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 36/299 (12%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+ P D YN L+++ L ++ S G+ P T+ L++ Y
Sbjct: 79 NAPPDALTYNVLIKMCARAGRKDLVARVLHRILSSGLTPCATTFHSLVA------AYVGF 132
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASA--EGILTMMSQ-------A 188
G+I A +I++ MR++ I +F A+ H ++D S E I+ Q
Sbjct: 133 GDIPTAERIVQAMRERRTDICL-LFRAVADDHIISHDQQSCVLEDIVKPWEQDEVPLLPK 191
Query: 189 GLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL-------FLCFSFQLTNLLILV 241
P+++ YT LM GY G ++ + + +++ + E + ++ ++ L+
Sbjct: 192 AYPPNSRVYTTLMKGYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLV--A 249
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD 301
+ DM A +L M QAG+ S TY L+ GY + + LLA + G D
Sbjct: 250 AGDMERARAVLEEMGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLAVDMAE--AGIQPD 307
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
++ + D+ + V N M + G+ PSA +YT LM +A G
Sbjct: 308 VVTYNTLIDGCVLTDDSAGAVALFN---------EMRERGIAPSAVSYTTLMKAFAASG 357
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 12/174 (6%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEF-MRDKTFPISEGVFNA 164
L ++ G+ +RVTY LI YCQ A ++L M + +N
Sbjct: 260 LEEMGQAGVAASRVTYNVLIKG------YCQQLQAGKAKELLAVDMAEAGIQPDVVTYNT 313
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
LI G +D A A + M + G+ PSA +YT LM +A G + +
Sbjct: 314 LIDGCVLTDDSAGAVALFNEMRERGIAPSAVSYTTLMKAFAASGQPKLAHKVFDEM--EK 371
Query: 225 ELFLCFSFQLTNLLILVSSDMA---SAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
+ + N+L+ + SA+ ++ M G++P TY L G A
Sbjct: 372 DPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMKARGVQPDVATYGSLAKGIA 425
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 7/137 (5%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK 129
+V E + D+ YN L+ + + + ++ +GI P+ V+Y +
Sbjct: 295 LAVDMAEAGIQPDVVTYNTLIDGCVLTDDSAGAVALFNEMRERGIAPSAVSY------TT 348
Query: 130 LISKYCQDGNIEGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
L+ + G + A K+ + M +D + +N L+ + + + SA+ ++ M
Sbjct: 349 LMKAFAASGQPKLAHKVFDEMEKDPRVAVDRAAWNMLVEAYCRLGLLESAKKVVERMKAR 408
Query: 189 GLEPSAQTYTKLMCGYA 205
G++P TY L G A
Sbjct: 409 GVQPDVATYGSLAKGIA 425
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 88/226 (38%), Gaps = 33/226 (14%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
+N LI ++A +L + +GL P A T+ L+ Y GD+ + + + +++
Sbjct: 87 YNVLIKMCARAGRKDLVARVLHRILSSGLTPCATTFHSLVAAYVGFGDIPTAERIVQAMR 146
Query: 222 PQSELFLCFSFQLTNLLILVSSDMASA--EGILTMMSQ-------AGLEPSAQTYTKLMC 272
+ +C F+ ++S D S E I+ Q P+++ YT LM
Sbjct: 147 -ERRTDICLLFRAVADDHIISHDQQSCVLEDIVKPWEQDEVPLLPKAYPPNSRVYTTLMK 205
Query: 273 GYAKHGDMDSVRRLL--------AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCF 324
GY G ++ V +L S + Y +I L +G E V
Sbjct: 206 GYMNAGRVEDVVAMLRAMRREGETSPASRPDHVTYTTVISTLVAAGDMERARAV------ 259
Query: 325 VNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA 370
LE M QAG+ S TY L+ GY + + LLA
Sbjct: 260 -------LEE--MGQAGVAASRVTYNVLIKGYCQQLQAGKAKELLA 296
>gi|414888268|tpg|DAA64282.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 868
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 125/326 (38%), Gaps = 42/326 (12%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H V D++ YN LL L + G+ P+ V+Y+ ++
Sbjct: 241 HDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVD------ 294
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ GN+ A ++ M + L+ H++ A A +L M G P
Sbjct: 295 AFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAP 354
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLK----PQSELFLCFSFQLTNLLILVSSDMASA 248
+A TY L+ Y + G D ++ ++ P + + N+L V D
Sbjct: 355 TAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTATY--------NVLFRVFGDGGFF 406
Query: 249 EGILTM---MSQAGLEPSAQTYTKLM--CGYAK-HGDMDSVRRLLAQSGSSLVNGDYLDI 302
+ ++ + M + G++P T +M CG+ HGD V + + G Y +
Sbjct: 407 KEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGL 466
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG-- 360
+ AL GH +E A V F MM++ G P+ +TY L YA+ G
Sbjct: 467 VEAL---GHAAMYEE--AYVAF----------NMMTEIGSLPTLETYNALAFAYARGGLF 511
Query: 361 -DMDSIRRLLAQNGSSLVNGDYLDII 385
+ ++I ++ N + D D +
Sbjct: 512 QEAEAIFSRMSNNAGIQKSKDSFDAL 537
Score = 44.7 bits (104), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 99/250 (39%), Gaps = 26/250 (10%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD----MDSIKTKI 217
+ +LI +++ A +L M G+ P+A TY ++ A+ D D +
Sbjct: 177 YTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVPFDMLLGLF 236
Query: 218 PSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
++ + + N L+ V S +E +L M +AG+ P +Y ++ +
Sbjct: 237 AEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAF 296
Query: 275 AKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
A G++ L +A +G + YL ++ A + G D V+ +
Sbjct: 297 ASAGNLSRAAELFSEMAATGHTADASAYLGLMEAH--TRVGATADAVAVL---------- 344
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVS 391
M G P+A TY L+ Y + G D +R+L + ++ V D V
Sbjct: 345 ---RQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFRVF 400
Query: 392 GHGEYIDEII 401
G G + E++
Sbjct: 401 GDGGFFKEVV 410
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 104/241 (43%), Gaps = 29/241 (12%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS--------- 126
E +V ++ YN L+R + + + + + K+ + GI+P+ VTY + +
Sbjct: 147 EGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALD 206
Query: 127 ----------------NSK----LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALI 166
N + ++S YC++G I A + M++ + +FN+LI
Sbjct: 207 QAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLI 266
Query: 167 YGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL 226
G D + +L +M + G++P T++ +M ++ G M+ + +
Sbjct: 267 KGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIE 326
Query: 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
++ + + + + AE +LT M ++G +P+ +T ++ G+ G MD R+
Sbjct: 327 PDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRV 386
Query: 287 L 287
Sbjct: 387 F 387
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 133/356 (37%), Gaps = 71/356 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D +NA++ + ++ + S + K++ G++P TY LI Y G E
Sbjct: 82 DSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKG------YGIAGKPE 135
Query: 142 GATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ K+LE M ++ + +N L+ + A ++ M +G++P TY +
Sbjct: 136 ESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTI 195
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
YA+ G +D AEG++ M G+
Sbjct: 196 ATAYAQKGALD-----------------------------------QAEGVILEMQNNGV 220
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSG--------SSLVNGDYLDIIHALAVS 309
+P+ +T +M GY K G + R + + G +SL+ G ++ I+ V
Sbjct: 221 QPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKG-FVAIMDRDGVD 279
Query: 310 GHGEYIDEVSA---IVCFVNICFHWLEGPMMS----------QAGLEPSAQTYTKLMCGY 356
++E ++ F I W M +AG+EP A Y+ L GY
Sbjct: 280 EVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGY 339
Query: 357 AKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI-QPGV 408
+ + + LL S + + +I +G +Y + K+ Q G+
Sbjct: 340 VRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGI 395
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 127/297 (42%), Gaps = 40/297 (13%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD-MDSIK-----T 215
FNA+I S++ +M SA M + G++P+ TY L+ GY G +S+K +
Sbjct: 86 FNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMS 145
Query: 216 KIPSLKPQSELFLCFSFQLTNLLILVSSD---MASAEGILTMMSQAGLEPSAQTYTKLMC 272
+ ++KP + + N+L+ + + A ++ M +G++P TY +
Sbjct: 146 QEGNVKP--------NLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIAT 197
Query: 273 GYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWL 332
YA+ G +D ++ + ++ V + + + +SG Y E I + +
Sbjct: 198 AYAQKGALDQAEGVILEMQNNGVQPN--ERTCGIIMSG---YCKE-GRIREALRFAYR-- 249
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALA 389
M + G+ P+ + L+ G+ D D + +L V D + I++A +
Sbjct: 250 ----MKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWS 305
Query: 390 VSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDA-----AYRIVNTLARSA 441
+G E EI + G DA H Y ++ KG + A A ++ T+ +S
Sbjct: 306 TAGFMEKCREIFDDMVKA-GIEPDA--HAYSILAKGYVRAQEPEKAEELLTTMIKSG 359
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 97/228 (42%), Gaps = 24/228 (10%)
Query: 70 FSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK 129
F+ EL + ++ +N+L++ ++ + L +E G++P+ +T+ S
Sbjct: 246 FAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITF------ST 299
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
+++ + G +E +I + M ++ L G+ +A + AE +LT M ++G
Sbjct: 300 IMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSG 359
Query: 190 LEPSAQTYTKLMCGYAKHGDMD---SIKTKI------PSLKPQSELFLCFSFQLTNLLIL 240
+P+ +T ++ G+ G MD + K+ P+LK L F+
Sbjct: 360 FQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFA--------- 410
Query: 241 VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
+ AE IL +M++ ++P T + + G RLL
Sbjct: 411 EARQPWKAEEILQIMTEFEVQPEKSTMLLVAEAWRATGMTKEANRLLG 458
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 95/247 (38%), Gaps = 58/247 (23%)
Query: 133 KYCQDGN----IEGATKILEFMRDKTFPI-SEGVFNALIYGHSQANDMASAEGILTMMSQ 187
K+C + + TK++ F+ +K P +E +F +LI G
Sbjct: 2 KFCTTKDSCRTVRSRTKLMNFLVEKGKPQEAESIFYSLIEG------------------- 42
Query: 188 AGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPS-----LKPQSELFLCFSFQLTNLLILV- 241
G +PS +YT L+ DSI + I + P S F N +I
Sbjct: 43 -GHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFF--------NAVINAF 93
Query: 242 --SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD-MDSVR--RLLAQSGSSLVN 296
S +M SA M + G++P+ TY L+ GY G +SV+ L++Q G+ N
Sbjct: 94 SESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPN 153
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY 356
+++ V A I W M +G++P TY + Y
Sbjct: 154 LRTYNVL--------------VRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAY 199
Query: 357 AKHGDMD 363
A+ G +D
Sbjct: 200 AQKGALD 206
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 18/125 (14%)
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIH 304
AE I + + G +PS +YT L+ DS+ +++Q + +N D + +I+
Sbjct: 32 AESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFFNAVIN 91
Query: 305 ALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
A + SG+ E SA+ F W M + G++P+ TY L+ GY G +
Sbjct: 92 AFSESGNME-----SAMETF------W----KMQENGMKPTTSTYNTLIKGYGIAGKPEE 136
Query: 365 IRRLL 369
+LL
Sbjct: 137 SVKLL 141
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 124/308 (40%), Gaps = 29/308 (9%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
G V DI YN L+ + L ++E+ G PN VT + L+
Sbjct: 25 GRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTC------TTLMDGL 78
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C+DG ++ A ++LE M+ K F ++ LI G ++ + + M G+ +
Sbjct: 79 CKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANV 138
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD--MASAEGIL 252
TY+ L+ G + G T + ++ ++ T L+ + D A +L
Sbjct: 139 VTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY--TGLIDGLCKDGRATHAMDLL 196
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+M + G EPS TY L+ G K G D + R++ + G Y ++ L
Sbjct: 197 NLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDK 256
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIR 366
G +DE + N F ++ LEP+ T+ L+ G K G + I
Sbjct: 257 GK---VDEALKL---FNSMFD-------NENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 303
Query: 367 RLLAQNGS 374
R + + GS
Sbjct: 304 RKMVKKGS 311
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 126/324 (38%), Gaps = 64/324 (19%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++ C++G + A ++ M K+ +N LI G +A + A G+L M AG
Sbjct: 4 VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
P++ T T LM G K G MD A
Sbjct: 64 CFPNSVTCTTLMDGLCKDGRMD-----------------------------------EAM 88
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
+L M + G + Y L+ G+ +G++D + L + ++ + Y ++H L
Sbjct: 89 ELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGL 148
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD----M 362
G + + V +N M++ G+ P TYT L+ G K G M
Sbjct: 149 CRLGQWKEANTV------LNA---------MAEHGIHPDVVTYTGLIDGLCKDGRATHAM 193
Query: 363 DSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEI-ISKIQPGVGYSADAANH---I 418
D + L+ + G N Y ++ L G ID I ++ G AD + +
Sbjct: 194 D-LLNLMVEKGEEPSNVTYNVLLSGLC--KEGLVIDAFKILRMMIEKGKKADVVTYNTLM 250
Query: 419 YHLINKGQIDAAYRIVNTLARSAN 442
L +KG++D A ++ N++ + N
Sbjct: 251 KGLCDKGKVDEALKLFNSMFDNEN 274
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 109/295 (36%), Gaps = 26/295 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKL--ESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
D+ YN L++ D + +EPN T+ LI C++G
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGG------LCKEGR 295
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ A KI M K + +N L+ G +A + A + + G P++ TY+
Sbjct: 296 LTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSI 355
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L+ G+ K ++ K ++ F + + + A+ + M A
Sbjct: 356 LIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNAN 415
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYID 316
EP ++ ++ G K GD V+ L + + D L +I+ L+ G +D
Sbjct: 416 CEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGE---LD 472
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
E + + M +G P A Y L+ G + GD I LL Q
Sbjct: 473 EAKSAL------------ERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQ 515
>gi|242060656|ref|XP_002451617.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
gi|241931448|gb|EES04593.1| hypothetical protein SORBIDRAFT_04g004710 [Sorghum bicolor]
Length = 593
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 86/202 (42%), Gaps = 6/202 (2%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y ++ VY + S ++++ G +PN TY + L++ + ++G E A +
Sbjct: 273 YTLMINVYGKAKQPMSSLKVFNEMKTIGCKPNICTY------TALVNAFAREGLCEKAEE 326
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M+ +NAL+ +S+A A I ++M G EP +Y L+ Y
Sbjct: 327 VFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYG 386
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G + LK Q S L S ++A E ++ + ++GL P
Sbjct: 387 RAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQLHKSGLRPDTF 446
Query: 266 TYTKLMCGYAKHGDMDSVRRLL 287
++ Y + G +D + RLL
Sbjct: 447 ALNAMLNAYGRAGRLDDMERLL 468
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 126/329 (38%), Gaps = 38/329 (11%)
Query: 82 DISHYNALLRVYLDNEH-TFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
DI YN L+ Y + + ++A LE+ + P TY + L+ YC G +
Sbjct: 164 DIICYNLLIDAYGQKRQLNKAESIYMALLEAHCV-PTEDTY------ALLLRAYCNSGQL 216
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A ++ M+ P + V+NA + G +A A + M + + +TYT +
Sbjct: 217 HRAEGVISEMQKNGLPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTETYTLM 276
Query: 201 MCGYAKHGD-MDSIKT----KIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
+ Y K M S+K K KP +C L N AE + M
Sbjct: 277 INVYGKAKQPMSSLKVFNEMKTIGCKPN----ICTYTALVNAFAR-EGLCEKAEEVFEEM 331
Query: 256 SQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG-H 311
QAG EP Y LM Y++ G + L+ G Y ++ A +G H
Sbjct: 332 QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAYGRAGLH 391
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
E A F + Q G+ P+ +++ L+ +AK G++ ++AQ
Sbjct: 392 QE------AEAAFQE----------LKQQGMRPTMKSHMLLLSAHAKSGNVARCEEVMAQ 435
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEI 400
S + D + L G +D++
Sbjct: 436 LHKSGLRPDTFALNAMLNAYGRAGRLDDM 464
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 59 LGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTF-SPTDFLAKLESQGIEPN 117
+G L F + E+ +P ++ N L++ N T + ++ ++G P+
Sbjct: 131 VGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPH 190
Query: 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS 177
TY LI C+ G I A ++ + M K + + +LI+G Q+ D+ S
Sbjct: 191 SYTYGTLIXG------LCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDS 244
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---------DMDSIKTKIPSLKPQSELF- 227
A +L M+ G++P+ TY+ LM G+ K G DM + +P++ S L
Sbjct: 245 AIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVH 304
Query: 228 -LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
LC +L A IL M GL P A Y K++ G+
Sbjct: 305 GLCKEGKLQE-----------AVEILDRMKLQGLRPDAGLYGKIISGFC 342
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 120/296 (40%), Gaps = 31/296 (10%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F K+E GI L S + LI +C+ + A +L M + S F +
Sbjct: 93 FSQKMELYGIS------HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGS 146
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ- 223
L++G N + A ++ +M ++G EP+ Y L+ G K+G+++ + ++ +
Sbjct: 147 LLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG 206
Query: 224 -SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+ ++ LT L S + A +L M + + P T+T L+ + K G++D
Sbjct: 207 LGADVVTYNTLLTGL--CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264
Query: 283 VRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+ L + QS N Y II+ L + HG D +M+
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCM--HGRLYDAKKTF-------------DLMAS 309
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSG 392
G P+ TY L+ G+ K +D +L + N D Y +IH G
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 91 RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFM 150
R+Y D + TF D +A S+G PN VTY LIS +C+ ++ K+ + M
Sbjct: 296 RLY-DAKKTF---DLMA---SKGCFPNVVTYNTLISG------FCKFRMVDEGMKLFQRM 342
Query: 151 RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210
+ F +N LI+G+ Q + A I M + P T+ L+ G +G++
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 211 DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKL 270
+S K ++ + ++ + + + + A + + G++P A+TYT +
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Query: 271 MCGYAKHG---DMDSVRRLLAQSG 291
+ G K+G + D + R + + G
Sbjct: 463 ILGLCKNGPRREADELIRRMKEEG 486
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 125/327 (38%), Gaps = 58/327 (17%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ N + L ++E +G+ + VTY L++ C G A +
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG------LCYSGRWSDAAR 232
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M ++ F ALI + ++ A+ + M Q+ ++P+ TY ++ G
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NLLI-------LVSSDMASAEGILTMMSQ 257
HG + K + + CF +T N LI +V M + MS
Sbjct: 293 MHGRLYDAKKTFDLMASKG----CFPNVVTYNTLISGFCKFRMVDEGMK----LFQRMSC 344
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEY 314
G TY L+ GY + G + + S V D + ++H L V+G E
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE- 403
Query: 315 IDEVSAIVCF--------------VNICFH-----------WLEGPMMSQAGLEPSAQTY 349
SA+V F NI H W + G++P A+TY
Sbjct: 404 ----SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Query: 350 TKLMCGYAKHG---DMDSIRRLLAQNG 373
T ++ G K+G + D + R + + G
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEG 486
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 77/184 (41%), Gaps = 9/184 (4%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
S+G P+ VTY LI+ +C+ +E K+ M + +N LI+G+
Sbjct: 842 SKGCFPDVVTYNTLITG------FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC 895
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
QA + A+ + M G+ P TY L+ +G ++ + L+
Sbjct: 896 QAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDII 955
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLL 287
++ + + + + A + +++ G++P A Y ++ G + G + D + R +
Sbjct: 956 TYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 1015
Query: 288 AQSG 291
+ G
Sbjct: 1016 KEDG 1019
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN L+ Y D + S+ + P+ +I++ L+ C +G IE
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD------IITHCILLHGLCVNGEIE 403
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + MR+ I +N +I+G +A+ + A + + G++P A+TYT ++
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 202 CGYAKHG 208
G K+G
Sbjct: 464 LGLCKNG 470
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/371 (18%), Positives = 136/371 (36%), Gaps = 62/371 (16%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L + D+ + L+ + L K+ G P+ VT L++ +CQ
Sbjct: 633 LGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNG------FCQ 686
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+ A +++ M F + ++N +I G + D+ +A + M + G+ A T
Sbjct: 687 GNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT 746
Query: 197 YTKLMCGYAKHGDM-DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
Y L+ G + G D+ + +K + + + F L + + ++ A + M
Sbjct: 747 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV-KEGNLLEARNLYKEM 805
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
+ + P+ TY L+ G+ HG + G +Y+
Sbjct: 806 IRRSVVPNVFTYNSLINGFCIHGCL-----------------------------GDAKYM 836
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
+ +M G P TY L+ G+ K ++ +L +
Sbjct: 837 FD------------------LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQ 878
Query: 376 LVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDA 429
+ GD Y +IH +G ++ +++ G S D + + L N G+I+
Sbjct: 879 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD-CGVSPDIVTYNILLDCLCNNGKIEK 937
Query: 430 AYRIVNTLARS 440
A +V L +S
Sbjct: 938 ALVMVEDLQKS 948
>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 123/296 (41%), Gaps = 32/296 (10%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
PN TY LI+ + C+ G ++ A ++ M+ K ++ +FN L+ G+ + +
Sbjct: 330 PNAYTYGALINGA------CKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMI 383
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT 235
A + +M Q G E A T + G+ + + K + +++ + SF +
Sbjct: 384 DEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSIL 443
Query: 236 NLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV 295
+ + A A + +M + G PS TY + Y K G M+ +L+ + +
Sbjct: 444 IDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGL 503
Query: 296 NGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
D Y +I SG+ + E+ F+ M Q GL + TYT +
Sbjct: 504 MPDTYTYTSLIDGERASGNVDRALEL----------FN-----EMPQLGLNRNVVTYTVI 548
Query: 353 MCGYAKHGDMDSIRRLLAQ-NGSSLV--NGDYLDIIHAL-----AVSGHGEYIDEI 400
+ G +K G D +L + N +V +G Y +I +L VSG +D I
Sbjct: 549 ISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLENVVDRI 604
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 134/324 (41%), Gaps = 29/324 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V +++ Y L+ Y + ++ +GIEP+ Y +I+ + C+ G
Sbjct: 258 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWN------CKFG 311
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N++ A + + M ++ + + ALI G +A +M +AE ++ M G++ + +
Sbjct: 312 NMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFN 371
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFL-CFSFQLTNLLILVSSDMASAEGILTMMSQ 257
LM GY K G +D ++ ++ Q + F+ + S+ A+ +L M +
Sbjct: 372 TLMDGYCKKGMIDE-ALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 430
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEY 314
G+ P+ +++ L+ Y K + RRL + + G + Y I G
Sbjct: 431 RGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGK--- 487
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGS 374
++E ++ M + GL P TYT L+ G G++D L +
Sbjct: 488 MEEAYKLI------------NEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQ 535
Query: 375 SLVNGD---YLDIIHALAVSGHGE 395
+N + Y II L+ G +
Sbjct: 536 LGLNRNVVTYTVIISGLSKDGRAD 559
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 128/310 (41%), Gaps = 49/310 (15%)
Query: 75 GELDVPLDISHY-NALLRVYLDNEHTFSPTDFLAKLESQGIEPN-RVTYQQLISNSKLIS 132
GE + P + + + L RVY+DN S + +G E + R ++ L++ +
Sbjct: 113 GEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKR--- 169
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
GN+E + L M D I + A++ G + ++ A+ ++ + G +P
Sbjct: 170 ----SGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKP 225
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV-----SSDMAS 247
S TY L+ GY + D+ + +I SL ++ + +T +L+ SS +
Sbjct: 226 SVITYNTLLNGYIEIKDVGGV-NEILSLMEKN----VVDYNVTTYTMLIEWYSRSSKIEE 280
Query: 248 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV---------RRLLAQSGSSLVNGD 298
AE + M + G+EP YT ++ K G+M RRL+ + +
Sbjct: 281 AEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYT------ 334
Query: 299 YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
Y +I+ +G E+ A VN M G++ + + LM GY K
Sbjct: 335 YGALINGACKAG------EMKAAEMMVND---------MQSKGVDVNRVIFNTLMDGYCK 379
Query: 359 HGDMDSIRRL 368
G +D RL
Sbjct: 380 KGMIDEALRL 389
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 154/400 (38%), Gaps = 46/400 (11%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQG--IEPNRVTYQQLISNSKL 130
T EL D+ Y+ LL+ D + D L + G PN V Y +I
Sbjct: 185 RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG--- 241
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
+ ++G++ A + + M + P +N++++ +A M AE L M +
Sbjct: 242 ---FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 298
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
P+ TY L+ GY+ G ++ S L + + + + A
Sbjct: 299 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 358
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
+ M+ G P +Y ++ GYA G DM + L+ G + + +I A A
Sbjct: 359 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 418
Query: 308 VSG--------------HGEYIDEVSAIVCFVNIC-FHWLEGPM-----MSQAGLEPSAQ 347
G HG D V+ +C ++ M M G+ P
Sbjct: 419 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 478
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH----GEYID-EIIS 402
Y L+ G+ HG + + L+++ + NG +LDI+ ++ + G +D + I
Sbjct: 479 AYNCLIQGFCTHGSLLKAKELISE---IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 535
Query: 403 KIQPGVGYSADAANHIYHLINK-----GQIDAAYRIVNTL 437
+ VG DA +Y ++ G+++ A R+ + +
Sbjct: 536 DLTVNVGLHPDAV--VYSMLMDGYCLVGKMEKALRVFDAM 573
Score = 45.4 bits (106), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 6/130 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L++ + + + ++++ + G+ + V + +I+N C+ G +
Sbjct: 476 DKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINN------LCKLGRVM 529
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A I + + V++ L+ G+ M A + M AG+EP+ Y L+
Sbjct: 530 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 589
Query: 202 CGYAKHGDMD 211
GY K G +D
Sbjct: 590 NGYCKIGRID 599
>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 119/285 (41%), Gaps = 42/285 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ +Y ++ ++ S +PN TY + L++ + ++G E A +
Sbjct: 289 YNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY------TALVNAFAREGLCEKAEE 342
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I E +++ V+NAL+ +S+A A I ++M G EP +Y ++ Y
Sbjct: 343 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 402
Query: 206 K---HGDMDSIKTKI------PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
+ H D +++ ++ P++K L +S + D+ E I+ MS
Sbjct: 403 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS---------KARDVTKCEAIVKEMS 453
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE 313
+ G+EP ++ Y + G + ++LA+ + D Y +I+ +G E
Sbjct: 454 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE 513
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
I+E+ FV + + P T+T + Y++
Sbjct: 514 RIEEL-----FVE----------LKEKNFRPDVVTWTSRIGAYSR 543
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 14/199 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YNAL+ Y + + + + ++ G EP+R +Y + ++ Y + G
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY------NIMVDAYGRAGLHS 408
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + E M+ + L+ +S+A D+ E I+ MS+ G+EP ++
Sbjct: 409 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 468
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFS-FQLTNLLILVSSD---MASAEGILTMMSQ 257
Y + G TK+ + + E C + N+LI + + E + + +
Sbjct: 469 NLYGRLGQF----TKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 524
Query: 258 AGLEPSAQTYTKLMCGYAK 276
P T+T + Y++
Sbjct: 525 KNFRPDVVTWTSRIGAYSR 543
Score = 46.2 bits (108), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 115/280 (41%), Gaps = 29/280 (10%)
Query: 136 QDGNIEGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ GN E A + + M RD+ P +E +N +I + +A+ + + M +P+
Sbjct: 263 RKGNTEEAIDVFQRMKRDRCKPTTE-TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNI 321
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG---I 251
TYT L+ +A+ G + + L+ L + N L+ S G I
Sbjct: 322 CTYTALVNAFAREGLCEKAEEIFEQLQEDG---LEPDVYVYNALMESYSRAGYPYGAAEI 378
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAK---HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
++M G EP +Y ++ Y + H D ++V + + G + ++ ++ A +
Sbjct: 379 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS- 437
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
+ + AIV MS+ G+EP ++ Y + G + ++
Sbjct: 438 --KARDVTKCEAIV------------KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKI 483
Query: 369 LAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQ 405
LA+ + D Y +I+ +G E I+E+ +++
Sbjct: 484 LAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 523
>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
Length = 1152
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 138/361 (38%), Gaps = 72/361 (19%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ + N +L+V D+ + + GI P +T+ ++ + + G++E
Sbjct: 240 VRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSC------FKAGDLER 293
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
KI M+ + SE +N LI G S+ M A M ++G + ++ L+
Sbjct: 294 VDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIE 353
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
GY K G D A G+ M AG+ P
Sbjct: 354 GYCKQGLFDD-----------------------------------AWGVTDEMLNAGIYP 378
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
+ TY +C G +D R LL+ + V Y ++H G V A +
Sbjct: 379 TTSTYNIYICALCDFGRIDDARELLSSMAAPDVVS-YNTLMHGYIKMGKF-----VEASL 432
Query: 323 CFVNICFHWLEGPMMSQAG-LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD- 380
F ++ +AG + PS TY L+ G + G+++ +RL + + L+ D
Sbjct: 433 LFDDL-----------RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDV 481
Query: 381 --YLDIIHALAVSGH----GEYIDEIISK-IQP-GVGYSADAANHIYHLINKGQIDAAYR 432
Y ++ +G+ E DE++ K I+P G Y+ A + G D A+R
Sbjct: 482 ITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGE----LRLGDSDKAFR 537
Query: 433 I 433
+
Sbjct: 538 L 538
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 18/192 (9%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKIL-EFMRDKTFPISEGVF 162
+F K+ G+ P+ VTY + +I Y ++G + A + E +R + +P S +
Sbjct: 573 EFQRKIFRVGLVPDHVTY------TTVIRGYLENGQFKMARNLYDEMLRKRLYP-SVITY 625
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKP 222
LIYGH++A + A T M + G+ P+ T+ L+ G K G++D + ++
Sbjct: 626 FVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEE 685
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTM---MSQAGLEPSAQTYTKLMCGYAKHGD 279
+ +S+ +LI + D E ++ + M +EP T+ L KH +
Sbjct: 686 EGIPPNKYSY---TMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALF----KHLE 738
Query: 280 MDSVRRLLAQSG 291
D L SG
Sbjct: 739 KDHESMALDSSG 750
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 132/331 (39%), Gaps = 38/331 (11%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
GI P TY + I C G I+ A ++L M +N L++G+ +
Sbjct: 375 GIYPTTSTY------NIYICALCDFGRIDDARELLSSMAAPDVV----SYNTLMHGYIKM 424
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
A + + + PS TY L+ G + G+++ + LK + L F
Sbjct: 425 GKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQ----RLKEEMTTQLIFPD 480
Query: 233 QLTNLLILV----SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
+T ++ + +++ A + M + G++P YT G + GD D RL
Sbjct: 481 VITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHE 540
Query: 289 QSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVN-ICFHWLEGPMMSQAGLEPSAQ 347
+ +V D+ HA ++ + ID + + V I F + + GL P
Sbjct: 541 E----MVATDH----HAPDLTIYNVRIDGLCKVGNLVKAIEFQ----RKIFRVGLVPDHV 588
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI 404
TYT ++ GY ++G R L + + Y +I+ A +G E + +++
Sbjct: 589 TYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM 648
Query: 405 QPGVGYSADAANH---IYHLINKGQIDAAYR 432
+ G + H +Y + G ID AYR
Sbjct: 649 KKR-GVRPNVMTHNALLYGMCKAGNIDEAYR 678
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 154/400 (38%), Gaps = 46/400 (11%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQG--IEPNRVTYQQLISNSKL 130
T EL D+ Y+ LL+ D + D L + G PN V Y +I
Sbjct: 172 RTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG--- 228
Query: 131 ISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL 190
+ ++G++ A + + M + P +N++++ +A M AE L M +
Sbjct: 229 ---FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRV 285
Query: 191 EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
P+ TY L+ GY+ G ++ S L + + + + A
Sbjct: 286 LPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARD 345
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALA 307
+ M+ G P +Y ++ GYA G DM + L+ G + + +I A A
Sbjct: 346 VFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYA 405
Query: 308 VSG--------------HGEYIDEVSAIVCFVNIC-FHWLEGPM-----MSQAGLEPSAQ 347
G HG D V+ +C ++ M M G+ P
Sbjct: 406 NCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKY 465
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGH----GEYID-EIIS 402
Y L+ G+ HG + + L+++ + NG +LDI+ ++ + G +D + I
Sbjct: 466 AYNCLIQGFCTHGSLLKAKELISE---IMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522
Query: 403 KIQPGVGYSADAANHIYHLINK-----GQIDAAYRIVNTL 437
+ VG DA +Y ++ G+++ A R+ + +
Sbjct: 523 DLTVNVGLHPDAV--VYSMLMDGYCLVGKMEKALRVFDAM 560
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 107/282 (37%), Gaps = 24/282 (8%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN +L Y TD + GI P+ T+ + LI Y G ++
Sbjct: 358 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF------NVLIKAYANCGMLD 411
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A I MRD + +I + M A M G+ P Y L+
Sbjct: 412 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 471
Query: 202 CGYAKHGDMDSIKTKIPSLKPQS-ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
G+ HG + K I + L + F + N L + M A+ I + GL
Sbjct: 472 QGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM-DAQNIFDLTVNVGL 530
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY--IDEV 318
P A Y+ LM GY G M+ R+ S+ + + +++ V+G+ + IDE
Sbjct: 531 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNV--VVYCTLVNGYCKIGRIDEG 588
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
++ M Q G++PS Y+ ++ G + G
Sbjct: 589 LSLF------------REMLQRGIKPSTILYSIIIDGLFQAG 618
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/353 (20%), Positives = 128/353 (36%), Gaps = 61/353 (17%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI------------- 125
+P D+ YN+++ FL ++ ++ + PN TY LI
Sbjct: 250 IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAV 309
Query: 126 ----------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
+ S L+ C+ G I+ A + + M K +N ++ G+
Sbjct: 310 RVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGY 369
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC 229
+ + + +M G+ P T+ L+ YA G +D ++
Sbjct: 370 ATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 429
Query: 230 FSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+++ + M A M G+ P Y L+ G+ HG + + L+++
Sbjct: 430 VTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISE 489
Query: 290 SGSSLVNGDYLDIIHALAVSGH----GEYIDEVSAIVCFVNICFH-------------WL 332
+ NG +LDI+ ++ + G +D + VN+ H L
Sbjct: 490 I---MNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCL 546
Query: 333 EGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNG 373
G M M AG+EP+ Y L+ GY K G +D S+ R + Q G
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRG 599
Score = 42.7 bits (99), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 88/215 (40%), Gaps = 13/215 (6%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
S GIEPN V Y L++ YC+ G I+ + M + S +++ +I G
Sbjct: 562 SAGIEPNVVVY------CTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLF 615
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
QA A+ M+++G+ TY ++ G K+ D L+ +
Sbjct: 616 QAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINII 675
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG------DM-DSV 283
+ + + + A+ + +S++ L PS TY+ ++ K G DM S+
Sbjct: 676 TLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM 735
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
+ + S L+N +++ + G Y+ ++
Sbjct: 736 QNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 770
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 114/271 (42%), Gaps = 24/271 (8%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ + ++ + G PN V Y + LI + Q+ A ++L+ M+++ +N
Sbjct: 438 NIVKEMIASGCRPNVVIY------TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
+LI G S+A M A L M + GL+P+A TY + GY + + S + ++
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 224 SEL---FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 280
L LC L N + + +M+ Q G+ A+TYT LM G K+ +
Sbjct: 552 GVLPNKVLCTG--LINEYCKKEKVIEACSAYRSMVDQ-GILGDAKTYTVLMNGLFKNDKV 608
Query: 281 DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
D + + + D + + ++G + + A F M +
Sbjct: 609 DDAEEIFREMRGKGIAPDVFS--YGVLINGFSKLGNMQKASSIF----------DEMVEE 656
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
GL P+ Y L+ G+ + G+++ + LL +
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y A + Y++ S ++ ++ G+ PN+V + LI++YC+ + A
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC------TGLINEYCKKEKVIEACS 578
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
M D+ + L+ G + + + AE I M G+ P +Y L+ G++
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEP 262
K G+M + + + L + + N+L+ S ++ A+ +L MS GL P
Sbjct: 639 KLGNMQKASSIFDEMVEEG---LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+A TY ++ GY K GD+ RL +
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 45/294 (15%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-SKLISKYCQDGNI 140
D Y L+ N+ + ++ +GI P+ +Y LI+ SKL GN+
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKL-------GNM 643
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A+ I + M ++ + ++N L+ G ++ ++ A+ +L MS GL P+A TY +
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 201 MCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
+ GY K GD+ + K+ L P S ++ L+ + E +T+
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY--------TTLVDGCCRLNDVERAITIF 755
Query: 256 --SQAGLEPSAQTYTKLMCGYAKHG----DMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
++ G S + L+ K G + + RL+ S + Y +I L
Sbjct: 756 GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYL 815
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
G+ E E+ FH M A L P+ TYT L+ GY K G
Sbjct: 816 CKEGNLEAAKEL----------FH-----QMQNANLMPTVITYTSLLNGYDKMG 854
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 131/344 (38%), Gaps = 58/344 (16%)
Query: 67 EDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLIS 126
E+ F G+ P D+ Y L+ + + + ++ +G+ PN + Y L+
Sbjct: 612 EEIFREMRGKGIAP-DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 127 NSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMS 186
+C+ G IE A ++L+ M K + + +I G+ ++ D+A A + M
Sbjct: 671 G------FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 187 QAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI--------PSLKPQSELF-LCFSFQLTNL 237
GL P + YT L+ G + D++ T S P + L F F T L
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 238 LILV-----------------------------SSDMASAEGILTMMSQAGLEPSAQTYT 268
V ++ +A+ + M A L P+ TYT
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYT 844
Query: 269 KLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFV 325
L+ GY K G + + ++ ++ + D Y II+A G + + V
Sbjct: 845 SLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM------TTKALVLV 898
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ F G + S T L+ G+AK G+M+ +++
Sbjct: 899 DQMF----AKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVM 938
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 116/289 (40%), Gaps = 25/289 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VPL + Y+ L+ + L +++S G+ + TY S LI +
Sbjct: 274 VPLKYT-YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY------SLLIDGLLKGR 326
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N + A ++ M I +++ I S+ M A+ + M +GL P AQ Y
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ GY + ++ + +K ++ + +++ + S D+ A I+ M +
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS 446
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYI 315
G P+ YT L+ + ++ R+L + + D Y +I L+ + +
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS---KAKRM 503
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
DE + + M + GL+P+A TY + GY + + S
Sbjct: 504 DEARSFLV------------EMVENGLKPNAFTYGAFISGYIEASEFAS 540
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 147/347 (42%), Gaps = 29/347 (8%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
+ +L +G PN VT SN+ LI C+ GN++ K+L M ++ +
Sbjct: 486 VELWCRLLGKGFVPNIVT-----SNA-LIHGLCKAGNMQETLKLLRDMLERGLVFDRITY 539
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKP 222
N LI G + + + M + G++P T+ L+ G +D K
Sbjct: 540 NTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKK 599
Query: 223 QSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+ +++ + ++ + E +L + LE ++ Y L+ Y +G+M++
Sbjct: 600 NGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNA 659
Query: 283 VRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
RL + G L Y ++H L G +D+ H L+ M +
Sbjct: 660 AFRLRDDMKSRGVLLSCATYSSLMHGLCNIG---LVDDAK----------HLLDE--MRK 704
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEY 396
GL P+ YT ++ GY+K G M+ + +L + S ++ + Y +I G +
Sbjct: 705 EGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKE 764
Query: 397 IDEIISKI-QPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLARSA 441
++++++ + G+ A N + L +G+++ A+++ + ++ A
Sbjct: 765 AAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGA 811
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 7/220 (3%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP ++ Y ++ Y + L +L S+ +E N V Y + LI YC +G
Sbjct: 603 VP-NVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVY------NSLIRAYCING 655
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N+ A ++ + M+ + +S +++L++G + A+ +L M + GL P+ YT
Sbjct: 656 NMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYT 715
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
++ GY+K G M+ + + + + F++ + A +L M++
Sbjct: 716 TIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEK 775
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD 298
G+ P A TY G K G ++ ++ + S V D
Sbjct: 776 GILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLD 815
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 114/270 (42%), Gaps = 18/270 (6%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
+GI+P+ T+ L+ C I+ A+++ + + + + +I G+
Sbjct: 564 KKGIQPDIYTFNLLLHG------LCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYC 617
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+AN + E +L + LE ++ Y L+ Y +G+M++ +K + L C
Sbjct: 618 KANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCA 677
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
++ + + A+ +L M + GL P+ YT ++ GY+K G M+ V +L +
Sbjct: 678 TYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEM 737
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYT 350
S ++ + + + + G + + + +N M++ G+ P A TY
Sbjct: 738 SSHNIHPN--KFTYTIMIDGFCK-LGKTKEAAKLLN---------EMTEKGILPDAVTYN 785
Query: 351 KLMCGYAKHGDMDSIRRLLAQNGSSLVNGD 380
G K G ++ ++ + S V D
Sbjct: 786 AFTNGLCKEGKVEEAFKVCDEMSSGAVCLD 815
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 115/534 (21%), Positives = 210/534 (39%), Gaps = 101/534 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ ++ ++ + +K+E G+ PN VTY +I C+ G ++
Sbjct: 255 DVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHG------LCKSGRLD 308
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + E M + S ++ I G + + A +L MS+ G P+ Y L+
Sbjct: 309 EAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLI 368
Query: 202 CGYAKHGDM-DSIKTK----IPSLKPQSELF------LCFSFQL---TNLL-ILVSSDMA 246
GY K G++ +++K + + P S C S Q+ N+L ++ +
Sbjct: 369 DGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLP 428
Query: 247 SAEGILTM--------------------MSQAGLEPSAQTYTKLMCGYAKHGDM-DSVR- 284
+G +M M L P+ T L+ G K G ++V
Sbjct: 429 INQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVEL 488
Query: 285 --RLLAQSG-SSLVNGDYLDIIHALAVSGHGEYI-----DEVSAIVCFVNICFHWL---- 332
RLL + ++V + L IH L +G+ + D + + F I ++ L
Sbjct: 489 WCRLLGKGFVPNIVTSNAL--IHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGC 546
Query: 333 --EGPM---------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDY 381
EG + M + G++P T+ L+ G +D RL + NG
Sbjct: 547 CKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKK---NG-- 601
Query: 382 LDIIHALAVSGHGEYIDEII--SKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLAR 439
+ V +G ID +K++ G N + L++K +++ + N+L R
Sbjct: 602 ----YVPNVYTYGVMIDGYCKANKVEEG-------ENLLNELVSK-KLELNSVVYNSLIR 649
Query: 440 SANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLARS 498
+ ING F +R +K+ GV S + + H L N G +D A +++ + +
Sbjct: 650 AYCINGNM--NAAFRLRDDMKSR--GVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKE 705
Query: 499 A---NINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLI 549
N+ +GG+ K Q ++KV V ++ N+HP F ++I
Sbjct: 706 GLLPNVVCYTTIIGGY-----SKLGQ-MNKVNIVLQEMSSHNIHPNKFTYTIMI 753
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 36/197 (18%)
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL--FLCFSFQLT 235
A + +++++ GL PS +T T L+ K + LK E+ F+C +
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANE----------LKKSYEVYDFICLGGIIP 254
Query: 236 NLLILVSSDMA--------SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
++ + + A A G+ + M + G+ P+ TY ++ G K G +D R
Sbjct: 255 DVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFK 314
Query: 288 AQSGSSLVNGDYLDIIHALAVSG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ V+ I +++ ++G E IDE + ++ MS+ G P+
Sbjct: 315 EKMVKEKVSPSL--ITYSVFINGLIKLEKIDEANCVL------------KEMSELGFVPN 360
Query: 346 AQTYTKLMCGYAKHGDM 362
Y L+ GY K G++
Sbjct: 361 EVVYNTLIDGYCKMGNI 377
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 160/418 (38%), Gaps = 77/418 (18%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L + DI + L+ + L+K+ G+EP+ VT+ + L++ C
Sbjct: 91 LGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTF------TTLLNGLCM 144
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+G ++ + + M + + +N +I S++ A G L M + G P+
Sbjct: 145 EGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVN 204
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y+ L+ GY G MD A + +M
Sbjct: 205 YSTLIDGYCLRGQMDE-----------------------------------ARSVFDLMV 229
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAVSGHGEYI 315
G P+ TYT LM GY K ++ +LL + +L G DI+ +SG
Sbjct: 230 SKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDE---TLRKGLVPDIVTFTTIISGLCRAG 286
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
++A F IC H G P+ TY L+ G KHG+++ L + S
Sbjct: 287 RPLAAQQLFRYICAH----------GHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRS 336
Query: 376 LVNGD---YLDIIHALAVSGHGEYIDEIISK-----IQPGVGYSADAANHIYHLINKGQI 427
V + Y +I +L G + E+ S+ ++P V Y+ A + L +G I
Sbjct: 337 TVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNV-YTYTAL--VGALCKEGLI 393
Query: 428 DAAYRIVNTLAR---SANINGEQLPVGGFL-------VRHMVKTNQPGVGYSADAANH 475
A+++ + + + + + GFL R +V+ G+SADAA
Sbjct: 394 IEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVE-EMVNRGFSADAATR 450
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 12/211 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ +N L+ Y S + ++ + GI P+ +TY +++ C+ G +
Sbjct: 454 DVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNG------LCKAGKAK 507
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ E M K + +N LI + N + A G++ M Q GL P A ++ L+
Sbjct: 508 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLI 567
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS---DMASAEGILTMMSQA 258
G+ ++GD+D L + +F N+LI S +M AE I M
Sbjct: 568 HGFCRNGDLDGAYLLFQKLDEKGYSATADTF---NILIGAYSSKLNMQMAEKIFGEMISK 624
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
G +P TY L+ G K ++D LA+
Sbjct: 625 GYKPDLYTYRILVDGLCKAANVDRAYAHLAE 655
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 129/311 (41%), Gaps = 41/311 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+R + +L ++ +QG P+ TY +I YC+ G ++
Sbjct: 279 DVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDG------YCKSGMLQ 332
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
AT++L+ K F + +LI G D+ A + L+P Y L+
Sbjct: 333 EATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLV 392
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFL--CFSFQLT-NLLILVSSDMASAEGILTMMSQA 258
G + G + + +L+ +E+ C T N++I M + +M+ A
Sbjct: 393 KGLCRQGLI------LHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDA 446
Query: 259 ---GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHG 312
G P T+ L+ GY K +DS +L+ + + + D Y +++ L +G
Sbjct: 447 IVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKA 506
Query: 313 EYIDE--------------VSAIVCFVNIC-FHWLEGP-----MMSQAGLEPSAQTYTKL 352
+ ++E ++ + N C + LE M Q GL P A ++ L
Sbjct: 507 KEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTL 566
Query: 353 MCGYAKHGDMD 363
+ G+ ++GD+D
Sbjct: 567 IHGFCRNGDLD 577
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 83/178 (46%), Gaps = 8/178 (4%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + + + ++ G+ P+ V++ LI +C++G+++GA
Sbjct: 528 YNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHG------FCRNGDLDGAYL 581
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + + +K + + FN LI +S +M AE I M G +P TY L+ G
Sbjct: 582 LFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLC 641
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSF-QLTNLLILVSSDMASAEGILTMMSQAGLEP 262
K ++D + + + + +F ++ NLL + + ++ A I+ +M + G+ P
Sbjct: 642 KAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAM-NHRVSEAVAIIHIMVRMGVVP 698
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 146/366 (39%), Gaps = 39/366 (10%)
Query: 76 ELDVPLDISHYNALL-RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
E + D+ Y+A++ R+ D H+ + F LE +GI PN TY +I +
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDG------F 341
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C G A ++L M ++ FNALI + + AE + M + P
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY ++ G+ KH D K + + +F + + + +L
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY 314
+S+ GL + TY L+ G+ + ++++ + L + S V D + L E
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 315 IDEVSAIVCFV------------NICFHWL-EGPMMSQA----------GLEPSAQTYTK 351
++E + + NI H + +G + +A G+EP QTY
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 352 LM---CGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGV 408
++ CG + D + + + NG N Y +I +G + E+IS+++
Sbjct: 578 MISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSN- 636
Query: 409 GYSADA 414
G+S DA
Sbjct: 637 GFSGDA 642
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/217 (19%), Positives = 86/217 (39%), Gaps = 41/217 (18%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ + + ++ + D ++ S G+ P+ +T L+ +C++ +E A +
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG------FCENEKLEEALE 523
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E ++ + +N +I+G + + + A + + G+EP QTY ++ G+
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
S ++ A + M G EP
Sbjct: 584 G-----------------------------------KSAISDANVLFHKMKDNGHEPDNS 608
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI 302
TY L+ G K G++D L+++ S+ +GD I
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 135/344 (39%), Gaps = 49/344 (14%)
Query: 112 QGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
+G PN V Y +I YC+ G+IE A + + ++ K F + F +I G +
Sbjct: 234 KGCIPNIVFYNTIIGG------YCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG----DMDSIKTKIPS-LKPQSEL 226
D +++ +L+ + + GL S ++ +HG +SI I + KP
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 227 FLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ N+LI A G L S+ GL P+ +Y L+ Y K + D
Sbjct: 348 Y--------NILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIA 399
Query: 284 RRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
+LL Q D Y +IH L VSGH + D V+ V ++
Sbjct: 400 SKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD--DAVNMKVKLID-------------R 444
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYI 397
G+ P A Y LM G K G + L ++ + D Y +I SG +
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 398 DEIIS-KIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
++ S ++ GV D +H I G +D A +N +
Sbjct: 505 RKVFSLSVEKGV--KVDVVHHNAMIKGFCRSGMLDEALACMNRM 546
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 126/334 (37%), Gaps = 62/334 (18%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D D++ YN L+ FL + +G+ PN ++Y + LI YC+
Sbjct: 340 DCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSY------APLIQAYCKS 393
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+ A+K+L M ++ + LI+G + M A + + G+ P A Y
Sbjct: 394 KEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIY 453
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
LM G K G +P A+ + + M
Sbjct: 454 NMLMSGLCKTGRF------LP-----------------------------AKLLFSEMLD 478
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALA-VSGHGE--Y 314
+ P A Y L+ G+ + GD D R++ + S+ G +D++H A + G
Sbjct: 479 RNILPDAYVYATLIDGFIRSGDFDEARKVFSL---SVEKGVKVDVVHHNAMIKGFCRSGM 535
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---IRRLLAQ 371
+DE A+ C M++ L P TY+ ++ GY K DM + I R + +
Sbjct: 536 LDE--ALACM----------NRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK 583
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
N Y +I+ G + +E ++Q
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/257 (19%), Positives = 108/257 (42%), Gaps = 21/257 (8%)
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
++ ++ +I +C+ G ++ A + M ++ + ++ +I G+ + DMA+A I
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF-QLTNLLILVS 242
M + +P+ TYT L+ G+ GD + ++ + + ++ L L S
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Query: 243 SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS-----GSSLVNG 297
S + A +M P+ T+ L+ G+ K + ++LA+ G S +
Sbjct: 640 STLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK----TSGKVLAEPDGSNHGQSSLFS 695
Query: 298 DYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM------MSQAGLEPSAQTYTK 351
++ + + S H + SA+VC +C H + M + G P ++
Sbjct: 696 EFFHRMKSDGWSDHAAAYN--SALVC---LCVHGMVKTACMFQDKMVKKGFSPDPVSFAA 750
Query: 352 LMCGYAKHGDMDSIRRL 368
++ G+ G+ R +
Sbjct: 751 ILHGFCVVGNSKQWRNM 767
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 154/392 (39%), Gaps = 44/392 (11%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LD Y L+ T + D L +++ ++PN V Y S +I C+D ++
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMY------STIIDGMCKDKHV 213
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A + M K + ++ALI G + A + M ++P T+ L
Sbjct: 214 NDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNIL 273
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQ----SELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
+ G+ K G M KT + Q + + C L + LV ++ A+ IL MS
Sbjct: 274 VDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYC---SLMDGYCLV-KEVNKAKSILYTMS 329
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE 313
Q G+ P Q+Y L+ G+ K +D L + + D Y +I L G
Sbjct: 330 QRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKIS 389
Query: 314 Y----IDEVS------AIVCFVNICFHWLEGPMMSQA----------GLEPSAQTYTKLM 353
Y +DE+ I+ + +I + + +A G+ P+ TYT L+
Sbjct: 390 YALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILI 449
Query: 354 CGYAKHG---DMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGY 410
G K G D +I L G ++ Y +IH G + ++SK++
Sbjct: 450 DGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDN-SC 508
Query: 411 SADAANH---IYHLINKGQIDAAYRIVNTLAR 439
DA + I L +K + D A ++ + R
Sbjct: 509 IPDAVTYEIIIRSLFDKDENDKAEKLREMITR 540
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP DI Y+++L N L KL+ QGI PN TY + LI C+ G
Sbjct: 403 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTY------TILIDGLCKGG 456
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+E A I E + K + I+ + +I+G A +L+ M P A TY
Sbjct: 457 RLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTY 515
>gi|115452625|ref|NP_001049913.1| Os03g0309800 [Oryza sativa Japonica Group]
gi|108707769|gb|ABF95564.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
gi|108707770|gb|ABF95565.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
gi|108707771|gb|ABF95566.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
gi|113548384|dbj|BAF11827.1| Os03g0309800 [Oryza sativa Japonica Group]
gi|125586018|gb|EAZ26682.1| hypothetical protein OsJ_10586 [Oryza sativa Japonica Group]
gi|215686360|dbj|BAG87621.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741099|dbj|BAG97594.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767065|dbj|BAG99293.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767110|dbj|BAG99338.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 501
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 13/224 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ N +L ++ + S + K GIEP T + LI Y + +
Sbjct: 288 DVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTL------NILIGAYGKKRMYD 341
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ ++E+MR FP + FN +I + A D + E M G++P +T+ L+
Sbjct: 342 KMSAVMEYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLI 401
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQA 258
G+ G + + +K L + N +++ + D+ E + M Q
Sbjct: 402 NGFGNAGLFHKV---VGMVKLAERLGVPMDTTFHNAVLMTCVKAEDLMEMERVFMRMKQI 458
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI 302
P A TY+ L+ Y K G D + +L Q +LV D + +
Sbjct: 459 QCIPDATTYSILVGAYRKEGMTDKI-YVLQQENPTLVPTDLVHV 501
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/277 (18%), Positives = 116/277 (41%), Gaps = 26/277 (9%)
Query: 139 NIEGATKILEFMRDKTF--PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
N + A ++ + ++++ F P EG F L+ ++ + A + M Q G +P+ +
Sbjct: 126 NWQEALQVFQMLKEQPFYHP-KEGTFMKLLLLLGRSGQPSRARYLFDEMLQQGCQPTPEL 184
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC----FSFQLTNLLILVSSDMASAEGIL 252
YT L+ Y ++G +D + +K +C +++ + +S + +
Sbjct: 185 YTALIAAYCRNGLLDDAFRLLADMKASP---VCQPDVYTYSTIIKACVDASRFDIVDAMY 241
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL-AQSGSSLVNGDYLDIIHALAVSGH 311
M+ + P+ T ++ GY + G +D + ++L A S+ D + L++ G+
Sbjct: 242 KDMADRSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTMNIILSLFGN 301
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK---HGDMDSIRRL 368
I+ + W E G+EP +T L+ Y K + M ++
Sbjct: 302 RGQIESME----------KWYEK--FRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEY 349
Query: 369 LAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
+ + + ++I A A +G + ++ ++++
Sbjct: 350 MRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMR 386
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 114/305 (37%), Gaps = 22/305 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAK-LESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ Y+ +++ +D F D + K + + I PN VT Q ++ +S Y + G +
Sbjct: 217 DVYTYSTIIKACVDASR-FDIVDAMYKDMADRSIAPNTVT-QNIV-----LSGYGRAGRL 269
Query: 141 EGATKILEFMRDKTFPISE-GVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ K+L M D T + N ++ + S E G+EP +T
Sbjct: 270 DDMEKVLSAMLDSTTSKPDVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTLNI 329
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L+ Y K D + + ++ + + +F + D + E M G
Sbjct: 330 LIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEG 389
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
++P +T+ L+ G+ G V ++ + V D L E + E+
Sbjct: 390 MKPDTKTFCCLINGFGNAGLFHKVVGMVKLAERLGVPMDTTFHNAVLMTCVKAEDLMEME 449
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG 379
+ M Q P A TY+ L+ Y K G D I +L Q +LV
Sbjct: 450 RVFM------------RMKQIQCIPDATTYSILVGAYRKEGMTDKI-YVLQQENPTLVPT 496
Query: 380 DYLDI 384
D + +
Sbjct: 497 DLVHV 501
>gi|326435879|gb|EGD81449.1| hypothetical protein PTSG_11845 [Salpingoeca sp. ATCC 50818]
Length = 695
Score = 66.6 bits (161), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
GI P Y +KL+ Y + E A ++++ MR +E + +YG+++
Sbjct: 424 GIAPTTTAY------NKLVKAYAHSRSPELAARVVDTMRGDGLLPNETTYRCWMYGYART 477
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
D A AE +L M G++P AQT+ L+ YA G++ + + I + E L SF
Sbjct: 478 RDPAGAEALLHEMQLHGMQPCAQTFNILVYCYAMAGEVGTARAVIDRMIECGERPLTVSF 537
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
+ ++ + ++T M++A + P+ TY L+ + + +D + +
Sbjct: 538 NVLANAYGRQHNLDALRALVTDMAEANVAPNLVTYNTLIKSFCMNHQVDKAEATVGRMIE 597
Query: 293 SLVNGD 298
S + GD
Sbjct: 598 SGLAGD 603
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/217 (20%), Positives = 93/217 (42%), Gaps = 28/217 (12%)
Query: 161 VFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL 220
+++ +++ ++ ++++A +L M QAG+EP+ T+ +M + + + D SL
Sbjct: 326 LWDQVVWCYALCKELSAARALLQTMRQAGVEPTMDTHAFVMMAHGRAYEADMALAMFDSL 385
Query: 221 KPQS-----ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
+ Q ++LC L ++ A + M ++G+ P+ Y KL+ YA
Sbjct: 386 QRQHTRLSLSVYLCIMDALAQ-----TAQPQEARAVFDTMVRSGIAPTTTAYNKLVKAYA 440
Query: 276 KHGDMDSVRRLLAQSGSSLVNGDYL---DIIHALAVSGHGEYIDEVSAIVCFVNICFHWL 332
+ R++ + GD L + + + G+ D A + H
Sbjct: 441 HSRSPELAARVV-----DTMRGDGLLPNETTYRCWMYGYARTRDPAGAEALLHEMQLH-- 493
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G++P AQT+ L+ YA G++ + R ++
Sbjct: 494 --------GMQPCAQTFNILVYCYAMAGEVGTARAVI 522
Score = 49.7 bits (117), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 124/314 (39%), Gaps = 47/314 (14%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L + G+EP T+ + ++ + + + A + + ++ + +S V+
Sbjct: 346 LLQTMRQAGVEPTMDTH------AFVMMAHGRAYEADMALAMFDSLQRQHTRLSLSVYLC 399
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI------P 218
++ +Q A + M ++G+ P+ Y KL+ YA H + ++
Sbjct: 400 IMDALAQTAQPQEARAVFDTMVRSGIAPTTTAYNKLVKAYA-HSRSPELAARVVDTMRGD 458
Query: 219 SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
L P + C+ + + D A AE +L M G++P AQT+ L+ YA G
Sbjct: 459 GLLPNETTYRCWMYGYAR-----TRDPAGAEALLHEMQLHGMQPCAQTFNILVYCYAMAG 513
Query: 279 DMDSVR-----------RLLAQSGSSLVNG----DYLDIIHALAVSGHGEYI--DEVSAI 321
++ + R R L S + L N LD + AL + + V+
Sbjct: 514 EVGTARAVIDRMIECGERPLTVSFNVLANAYGRQHNLDALRALVTDMAEANVAPNLVTYN 573
Query: 322 VCFVNICF-HWLEGP-----MMSQAGLEPSAQTYTKLMCGYAKHGDMDSI----RRLLAQ 371
+ C H ++ M ++GL T+ L YA+ G +DS+ RR +A
Sbjct: 574 TLIKSFCMNHQVDKAEATVGRMIESGLAGDLSTWGALAGAYARKGHIDSLLLTFRRCIA- 632
Query: 372 NGSSLVNGDYLDII 385
G L N D++
Sbjct: 633 -GGCLPNKQMFDMV 645
>gi|357128605|ref|XP_003565962.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Brachypodium distachyon]
Length = 431
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 117/322 (36%), Gaps = 78/322 (24%)
Query: 79 VPLDISHYNA----LLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
VP SH NA LL ++ N + D L + G+ PN V+Y ++ +
Sbjct: 116 VPAFCSHSNATFHALLHCFVCNGRLDAARDLLPRAAKLGVRPNAVSYNIILKGA------ 169
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C+ GA +L+ M + + FN L+ Q ++ AE + M + G+ P+A
Sbjct: 170 CERDGFVGARVVLDEMLGRGVRPTVVTFNTLVGAACQEGELGGAERLREEMVRRGVTPNA 229
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY+ LM G G D K + ++ Q
Sbjct: 230 VTYSLLMRGLCDAGRHDDAKKMMFDMEYQ------------------------------- 258
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
G + A Y LM YA+ G++D VR LL+ + D Y +I L +
Sbjct: 259 ----GCQTEAVNYGVLMSAYARQGNIDGVRGLLSNMRKRKLKPDDASYNVLIKCLC--DN 312
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
G ++ A+V M + G PSA TY L G D
Sbjct: 313 GRVVEAHKALV------------EMQVKEGTVPSAATYRVLADGCCSAQDF--------- 351
Query: 372 NGSSLVNGDYLDIIHALAVSGH 393
G L +++A+ SGH
Sbjct: 352 -------GLGLRVLNAMLASGH 366
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 106/262 (40%), Gaps = 27/262 (10%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
+L V + YN +L+ + + L ++ +G+ P VT+ L+ +
Sbjct: 149 RAAKLGVRPNAVSYNIILKGACERDGFVGARVVLDEMLGRGVRPTVVTFNTLVGAA---- 204
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
CQ+G + GA ++ E M + + ++ L+ G A A+ ++ M G +
Sbjct: 205 --CQEGELGGAERLREEMVRRGVTPNAVTYSLLMRGLCDAGRHDDAKKMMFDMEYQGCQT 262
Query: 193 SAQTYTKLMCGYAKHGDMDSIK-----TKIPSLKPQSELFLCFSFQLTNLLILVSSD--- 244
A Y LM YA+ G++D ++ + LKP + N+LI D
Sbjct: 263 EAVNYGVLMSAYARQGNIDGVRGLLSNMRKRKLKPDDASY--------NVLIKCLCDNGR 314
Query: 245 -MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII 303
+ + + ++ M + G PSA TY L G D R+L ++++ + +
Sbjct: 315 VVEAHKALVEMQVKEGTVPSAATYRVLADGCCSAQDFGLGLRVL----NAMLASGHCPLA 370
Query: 304 HALAVSGHGEYIDEVSAIVCFV 325
H G DE + CFV
Sbjct: 371 HTFRHLVKGLSEDEKTEEACFV 392
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 120/329 (36%), Gaps = 78/329 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y AL+ YL + D ++ G PN VTY L+ C+ GNI A +
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG------LCKAGNISKAFE 414
Query: 146 ILEFM--------RDKTFPISEG--------VFNALIYGHSQANDMASAEGILTMMSQAG 189
+ + D FP + + AL+ G +A+ + A +L M +G
Sbjct: 415 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 474
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
EP+ Y L+ G+ K G +D SA+
Sbjct: 475 CEPNHIVYDALIDGFCKAGKID-----------------------------------SAQ 499
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
+ M++ G PS TYT L+ K G +D ++L+Q + Y +I L
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G E ++ + +M + G P+ TYT L+ G K G +D
Sbjct: 560 CRIGESEKALKLLS---------------LMEEKGCSPNVVTYTALIDGLGKAGKIDLSL 604
Query: 367 RLLAQNGSSLVNGDYLD---IIHALAVSG 392
L Q + +Y+ +I+ L +G
Sbjct: 605 DLFTQMSRKGCSPNYVTYRVLINHLCAAG 633
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 137/338 (40%), Gaps = 44/338 (13%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+++ G+ P+ TY + LI +C+ G IE A + E MR + + ALI+
Sbjct: 313 EMKMVGVTPDVYTY------TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 366
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
+ +A + A I M AG P+ TY L+ G K G++
Sbjct: 367 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK--------------- 411
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+F++ LI +SD A ++ + L P+ TY L+ G K +D LL
Sbjct: 412 ---AFEVYAKLI-GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL 467
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
SS ++ I++ + G + SA F+ M++ G PS
Sbjct: 468 DAMLSSGCEPNH--IVYDALIDGFCKAGKIDSAQEVFLQ----------MTKCGYLPSVH 515
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI 404
TYT L+ K G +D ++L+Q + Y +I L G E +++S +
Sbjct: 516 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 575
Query: 405 QPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLAR 439
+ G S + + I L G+ID + + ++R
Sbjct: 576 EEK-GCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSR 612
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 95/240 (39%), Gaps = 28/240 (11%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L+++ PN VTY + +I C+ G E A K+L M +K + + AL
Sbjct: 537 LSQMLKDSCTPNVVTY------TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 590
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I G +A + + + T MS+ G P+ TY L+ G +D + + +K +
Sbjct: 591 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK---Q 647
Query: 226 LFLCFSFQLTNLLIL-VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ Q I S ++ GIL M G P A Y L+ ++K G ++
Sbjct: 648 TYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAM 707
Query: 285 RLLAQ-----SGSSLVNGDYLDIIHALAVSGHGE-------------YIDEVSAIVCFVN 326
L + S N Y +I AL ++ E ++ E+S VC +
Sbjct: 708 ELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIK 767
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 86/422 (20%), Positives = 165/422 (39%), Gaps = 66/422 (15%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY-------------------- 121
DI YN+L++ Y D + +A L S+G P++V+Y
Sbjct: 304 DIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLM 363
Query: 122 QQLISNSKLISK----------YCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQ 171
++++ NS LI + G+ + A L+ +DK F I + ++A+++ Q
Sbjct: 364 EKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQ 423
Query: 172 ANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL-----KPQSEL 226
M A+ ++ M G P TYT ++ G+ + G +D K + + KP +
Sbjct: 424 KGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVS 483
Query: 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---V 283
+ L + S A ++ + + P+A TY +M G + G + +
Sbjct: 484 YTALLNGLCH-----SGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDL 538
Query: 284 RRLLAQSGSSLVNGDYLDIIHALA----VSGHGEYIDEVSAIVCFVNI-----CFHW--- 331
R + + G + +I +L V +Y++E C +N+ H
Sbjct: 539 TREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQ 598
Query: 332 ---LEGPM-----MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGSSLVNGD 380
+E + M +G P A TYT L K G +D L+ + G
Sbjct: 599 IGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVT 658
Query: 381 YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAYRIVNTLARS 440
Y +IH + G + + ++ K+ + I L + G ++ A +++ + R+
Sbjct: 659 YRSVIHRYSQWGRVDDMLNLLEKMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRT 718
Query: 441 AN 442
A+
Sbjct: 719 AS 720
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 124/309 (40%), Gaps = 54/309 (17%)
Query: 132 SKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
+K CQ GA ++L M + F ++ +S+A + +A +LT+M +AG+E
Sbjct: 213 TKLCQ-----GARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVE 267
Query: 192 PSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
PS + K G ++ + ++ +KP + N LI D+
Sbjct: 268 PSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTY--------NSLIKGYCDLN 319
Query: 247 SAEGILTMMS---QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS--GSSLVNGD--Y 299
E L +++ G P +Y +M K ++ V+ L+ + S+L+ Y
Sbjct: 320 RIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTY 379
Query: 300 LDIIHALAVSGH--------------GEYIDEVSAIVCFVNICFHWLEGPM--------- 336
+IH L+ GH G +ID+V + C +G M
Sbjct: 380 NTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFC---QKGRMDEAKSLVID 436
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGSSLVNGDYLDIIHALAVSGH 393
M G P TYT ++ G+ + G +D +++L Q +G Y +++ L SG
Sbjct: 437 MYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGK 496
Query: 394 GEYIDEIIS 402
E+I+
Sbjct: 497 SLEAREMIN 505
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 147/368 (39%), Gaps = 33/368 (8%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
+D Y+A++ + + + S+G P+ VTY + ++ +C+ G I
Sbjct: 409 IDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTY------TAIVDGFCRLGRI 462
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
+ A KIL+ M + + AL+ G + A ++ + + P+A TY +
Sbjct: 463 DEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAV 522
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQ 257
M G + G + + + F ++ NLLI + + A+ L
Sbjct: 523 MHGLRREGKLSEACDLTREMVEKG--FFPTPVEI-NLLIQSLCQNQKVVEAKKYLEECLN 579
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEY 314
G + +T ++ G+ + GDM++ +L SG Y + AL G
Sbjct: 580 KGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGR--- 636
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN-G 373
+DE + ++ M+S+ GL+P+ TY ++ Y++ G +D + LL +
Sbjct: 637 LDEAAELIV-----------KMLSK-GLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLK 684
Query: 374 SSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIY--HLINKGQIDAAY 431
Y +I L G+ E ++++ K+ H+ + KG +AY
Sbjct: 685 RQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAY 744
Query: 432 RIVNTLAR 439
++ + R
Sbjct: 745 KVACRMFR 752
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 106/268 (39%), Gaps = 37/268 (13%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL +++ GI+P+ VTY LI YC IE A +++ + K P + +
Sbjct: 292 FLERMQVTGIKPDIVTYNSLIKG------YCDLNRIEDALELIAGLPSKGCPPDKVSYYT 345
Query: 165 LIYGHSQANDMASAEGIL-TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
++ + + + ++ M+ + L P TY L+ +KHG D + + +
Sbjct: 346 VMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDK 405
Query: 224 SELFLCFSFQLTNLLILVSS-----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
F +V S M A+ ++ M G P TYT ++ G+ + G
Sbjct: 406 G-----FHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLG 460
Query: 279 DMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNIC-FHWLEG 334
+D +++L Q G Y +++ L SG E+ +N+ HW
Sbjct: 461 RIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREM------INVSEEHW--- 511
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
P+A TY +M G + G +
Sbjct: 512 -------WTPNAITYGAVMHGLRREGKL 532
>gi|356562783|ref|XP_003549648.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Glycine max]
Length = 859
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 121/289 (41%), Gaps = 27/289 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI--EGA 143
Y A++ Y N + + L ++ + + P+ +TY +I+ C G + EG
Sbjct: 174 YTAVINAYGRNGQFHASLELLNGMKQERVSPSILTYNTVINA-------CARGGLDWEGL 226
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+ MR + +N L+ + AE + M+++G+ P TY+ L+
Sbjct: 227 LGLFAEMRHEGIQPDVITYNTLLGACAHRGLGDEAEMVFRTMNESGIVPDINTYSYLVQT 286
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMAS---AEGILTMMSQAGL 260
+ K ++ + + ++ L S+ N+L+ +++ S A + M AG
Sbjct: 287 FGKLNRLEKVSELLREMESGGNLPDITSY---NVLLEAYAELGSIKEAMDVFRQMQAAGC 343
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
+A TY+ L+ Y KHG D VR + + S + D + V G G Y EV
Sbjct: 344 VANAATYSVLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVT 403
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ FH M + +EP+ +TY L+ K G + +++L
Sbjct: 404 L-------FH-----DMVEENVEPNMETYEGLIFACGKGGLYEDAKKIL 440
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 106/294 (36%), Gaps = 42/294 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI+ YN LL Y + D ++++ G N TY S L++ Y + G +
Sbjct: 311 DITSYNVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATY------SVLLNLYGKHGRYD 364
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
I M+ G +N LI + + M + +EP+ +TY L+
Sbjct: 365 DVRDIFLEMKVSNTDPDAGTYNILIQVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLI 424
Query: 202 CGYAKHG---DMDSI------KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
K G D I K +PS K + + F LV +
Sbjct: 425 FACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAFGQAALYEEALV---------VF 475
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVS 309
M++ G P+ +TY + +A+ G +L++ S + D + +I A
Sbjct: 476 NTMNEVGSNPTVETYNSFIHAFARGGLYKEAEAILSRMNESGLKRDVHSFNGVIKAFRQG 535
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
G E A+ +V M +A EP+ T ++ Y G +D
Sbjct: 536 GQYE-----EAVKSYVE----------MEKANCEPNELTLEVVLSVYCSAGLVD 574
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 66/331 (19%), Positives = 125/331 (37%), Gaps = 79/331 (23%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP DI+ Y+ L++ + ++ L ++ES G P+ +Y
Sbjct: 274 VP-DINTYSYLVQTFGKLNRLEKVSELLREMESGGNLPDITSY----------------- 315
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N L+ +++ + A + M AG +A TY+
Sbjct: 316 ------------------------NVLLEAYAELGSIKEAMDVFRQMQAAGCVANAATYS 351
Query: 199 KLMCGYAKHGDMDSIK-----TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
L+ Y KHG D ++ K+ + P + + N+LI V + + ++T
Sbjct: 352 VLLNLYGKHGRYDDVRDIFLEMKVSNTDPDAGTY--------NILIQVFGEGGYFKEVVT 403
Query: 254 M---MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALA 307
+ M + +EP+ +TY L+ K G + +++L + G + Y +I A
Sbjct: 404 LFHDMVEENVEPNMETYEGLIFACGKGGLYEDAKKILLHMNEKGIVPSSKAYTGVIEAF- 462
Query: 308 VSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRR 367
G +E A+V F M++ G P+ +TY + +A+ G
Sbjct: 463 --GQAALYEE--ALVVF----------NTMNEVGSNPTVETYNSFIHAFARGGLYKEAEA 508
Query: 368 LLAQNGSSLVNGD---YLDIIHALAVSGHGE 395
+L++ S + D + +I A G E
Sbjct: 509 ILSRMNESGLKRDVHSFNGVIKAFRQGGQYE 539
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 132/320 (41%), Gaps = 47/320 (14%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL L ++G P+ +I +KLI + NIE A++++E + T P +NA
Sbjct: 90 FLECLVNKGYTPD------VILCTKLIKGFFNFKNIEKASRVMEILESHTEP-DVFAYNA 142
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSIKTKIPSLK 221
+I G + N + +A +L M G P TY + +C K G +LK
Sbjct: 143 VISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG---------LALK 193
Query: 222 PQSELFL--CFSFQLTNLLIL----VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
+L L C +T +++ V + A +L M GL P TY ++ G
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 253
Query: 276 KHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWL 332
K G D +L+A+ G Y +I +L G IDE +++
Sbjct: 254 KEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGR---IDEAISVL---------- 300
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALA 389
+M + L P +Y L+ K G +D I + NG +Y I+ AL
Sbjct: 301 --KVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALC 358
Query: 390 VSGHGEYIDEIISKIQPGVG 409
+G+ EI +K++ G+G
Sbjct: 359 KNGNANQALEIFNKLR-GMG 377
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/229 (19%), Positives = 86/229 (37%), Gaps = 29/229 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-------------- 127
D+ YNA++ + + T L +++++G P+ VTY +I +
Sbjct: 136 DVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVL 195
Query: 128 ---------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
+ LI +G I A K+LE M + +NA+I G +
Sbjct: 196 DQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE 255
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
E ++ M G EP+ TY+ L+ + G +D + + + + +S+
Sbjct: 256 GMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSY 315
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD 281
+ + A GI+ M G P Y ++ K+G+ +
Sbjct: 316 DPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 364
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 132/348 (37%), Gaps = 64/348 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ +N LL V+ N + +++ G P R TY LIS+ Y + G +
Sbjct: 430 DVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISS------YSRCGLFD 483
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +I + M + +NA++ ++ AE + M +P +Y+ L+
Sbjct: 484 QAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLL 543
Query: 202 CGYAKHGDMDSIK-------------------------TKIPSLKPQSELFLCFSFQLTN 236
YA +D +K K+ SL + F + +
Sbjct: 544 HAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCS 603
Query: 237 LLILVSSDMAS----------AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
L I V + M S E +LT+M + + SA TY LM Y++ GD + +
Sbjct: 604 LDINVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAI 663
Query: 287 LAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSA----------IVCFVNICFHWLE 333
L + SS + D Y +I+A G + + + IV + ++
Sbjct: 664 LTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVA 723
Query: 334 GPMMSQA----------GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M +A G +P+ +TY ++ GY +HG M + L+
Sbjct: 724 NLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSN 771
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 131/329 (39%), Gaps = 32/329 (9%)
Query: 86 YNALLRVYLDNEHTFSPTDFLA-KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
YN +L VY + L ++ GIE +R TY LIS + + G A
Sbjct: 223 YNVVLHVYSKMSVPWKEVVVLVDSMKEDGIELDRYTYNTLISCCR------RRGLYREAA 276
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
++ + M+ F + FN+L+ + +A A G+L M AG PS TY L+ Y
Sbjct: 277 QMFDEMKAAGFEPDKVTFNSLLDVYGKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAY 336
Query: 205 AKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
K G ++ + + +KP + ++ ++ L + D A A + M + G
Sbjct: 337 VKDGLLEEALELKQEMEFRGMKPD---VVTYTTLISGLDRIGKIDAALA--TYSEMVRNG 391
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
P+ TY L+ + G + + S+ D + LAV G EVS
Sbjct: 392 CSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLDSEVS 451
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSL 376
+ M +AG P TY L+ Y++ G D I + + + G
Sbjct: 452 GVF------------KEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYP 499
Query: 377 VNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
Y ++ ALA G +++ ++++
Sbjct: 500 DISTYNAVLSALARGGRWVQAEKLFAEME 528
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 87/215 (40%), Gaps = 53/215 (24%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LDI+ NA++ +Y N K++ K
Sbjct: 604 LDINVLNAMVSIYGKN--------------------------------KMVKK------- 624
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
++L M++ + S +N+L++ +S+ D E ILT + +G+ P +Y +
Sbjct: 625 --VEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTV 682
Query: 201 MCGYAKHGDMDSI-----KTKIPSLKPQSELFLCF-SFQLTNLLILVSSDMASAEGILTM 254
+ Y + G M + K +KP + F + NL+ + D+ + +
Sbjct: 683 IYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDL-----VRYL 737
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
++Q G +P+ +TY ++ GY +HG M + L+
Sbjct: 738 VAQ-GCKPNERTYNSILEGYCRHGRMVEAKSFLSN 771
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 9/140 (6%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+L+ +Y L +++S G+ P+R +Y +I Y + G ++ A++
Sbjct: 644 YNSLMHMYSRLGDCEKCEAILTEIKSSGMRPDRYSYNTVIY------AYGRKGQMKEASR 697
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M+ +N I + A ++ + G +P+ +TY ++ GY
Sbjct: 698 LFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAIDLVRYLVAQGCKPNERTYNSILEGYC 757
Query: 206 KHGDM---DSIKTKIPSLKP 222
+HG M S + +P + P
Sbjct: 758 RHGRMVEAKSFLSNLPKIYP 777
>gi|222637475|gb|EEE67607.1| hypothetical protein OsJ_25160 [Oryza sativa Japonica Group]
Length = 225
Score = 66.2 bits (160), Expect = 7e-08, Method: Composition-based stats.
Identities = 54/211 (25%), Positives = 80/211 (37%), Gaps = 41/211 (19%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V D+ Y L+R D + + ++ GIEPN V Y S L+ YC+ G
Sbjct: 25 VRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVY------SSLLQGYCKSG 78
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
E K+ M +K ++ LI + A G++ MM + GLEP+ TY
Sbjct: 79 RWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYN 138
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ K G S+K I G+L MS+
Sbjct: 139 VLINCMCKEG---SVKEAI--------------------------------GVLKKMSEK 163
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
G+ P TY L+ G + +MD LL +
Sbjct: 164 GVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 194
Score = 49.7 bits (117), Expect = 0.008, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C D + A +L MR + LI G A ++ A ++ M ++G+EP+
Sbjct: 5 CADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNV 64
Query: 195 QTYTKLMCGYAKHGDMDSI-KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILT 253
Y+ L+ GY K G + + K + + E + L + L V A G++
Sbjct: 65 VVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGK-AKKAHGVMD 123
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDM 280
MM + GLEP+ TY L+ K G +
Sbjct: 124 MMVRRGLEPNVVTYNVLINCMCKEGSV 150
>gi|218190151|gb|EEC72578.1| hypothetical protein OsI_06020 [Oryza sativa Indica Group]
Length = 738
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 141/357 (39%), Gaps = 71/357 (19%)
Query: 82 DISHYNALLRVYLDNEH-TFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
DI YN L+ Y + + ++A LE+Q + P TY + L+ YC G++
Sbjct: 317 DIICYNLLIESYGKKRQLNKAESIYMALLEAQCV-PTEDTY------ALLLRAYCNAGSL 369
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYG-------------------------------- 168
A ++ MR+ P + V+NA + G
Sbjct: 370 HRAEGVISEMREHGIPPNATVYNAYLDGLLKARCTEKAVEVYQRMKRERCRANTETFTLM 429
Query: 169 ---HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
+ +A S+ + M G +P+ TYT L+ +A+ G + + ++
Sbjct: 430 INVYGKAKQPMSSMKVFNEMKSIGCKPNICTYTALVNAFAREGLCEKAEEVFEEMQQAGH 489
Query: 226 LFLCFSFQLTNLLILVSSDMASAEG---ILTMMSQAGLEPSAQTYTKLMCGYAK---HGD 279
+++ N L+ S +G I ++M G EP +Y L+ Y + H D
Sbjct: 490 EPDVYAY---NALMEAYSRAGLPQGASEIFSLMQHMGCEPDRASYNILVDAYGRAGLHED 546
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
++V L Q G S ++ ++ A A SG+ +EV A + +
Sbjct: 547 AEAVFEELKQRGMSPTMKSHMLLLAAHARSGNATRCEEVMA---------------QLHK 591
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLA---QNGSSLVNGDYLDIIHALAVSGH 393
+GL P ++ YA+ G +D + RLLA + G + V G Y ++A +G+
Sbjct: 592 SGLTPDTFALNAMLNAYARAGRLDDMERLLAAMERRGDADV-GTYNVAVNAYGRAGY 647
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 9/213 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN LLR +L+ +A++ S+G EPN+VTY S LIS C+ G I+
Sbjct: 286 DVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTY------SILISSLCRFGRID 339
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L+ M +K ++ LI + + A GI+ M G P Y ++
Sbjct: 340 EAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTIL 399
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
K+G+ + L+ S+ + D + A G++ M G++
Sbjct: 400 AALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGID 459
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL---AQSG 291
P TY L+ + G ++ LL QSG
Sbjct: 460 PDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 492
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 136/344 (39%), Gaps = 36/344 (10%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL L ++G P+ +I +KLI + NIE A++++E + T P +NA
Sbjct: 100 FLECLVNKGYTPD------VILCTKLIKGFFNFKNIEKASRVMEILESHTEP-DVFAYNA 152
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
+I G + N + +A +L M G P TY ++ + T + L +
Sbjct: 153 VISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDN 212
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ ++ + +V + A +L M GL P TY ++ G K G ++
Sbjct: 213 CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAA 272
Query: 285 RLLAQSGSSLVNGDYLDI-IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
L+ S D + I A G++ DE +V M S+ G E
Sbjct: 273 ELITSLTSKGCEPDVISYNILLRAFLNQGKW-DEGEKLV-----------AEMFSR-GCE 319
Query: 344 PSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEY---- 396
P+ TY+ L+ + G +D S+ +++ + + Y +I AL G +
Sbjct: 320 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 379
Query: 397 IDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
+D +IS G D N+ + L G + A I N L
Sbjct: 380 MDYMISN-----GCLPDIVNYNTILAALCKNGNANQALEIFNKL 418
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 130/338 (38%), Gaps = 66/338 (19%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-------------- 127
D+ YNA++ + + T L +++++G P+ VTY +I +
Sbjct: 146 DVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVL 205
Query: 128 ---------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
+ LI +G I A K+LE M + +NA+I G +
Sbjct: 206 DQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE 265
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL--CF 230
+ A ++T ++ G EP +Y L+ + G D + K +E+F C
Sbjct: 266 GMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGE------KLVAEMFSRGCE 319
Query: 231 SFQLTNLLILVSS-----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---S 282
++T IL+SS + A +L +M + L P +Y L+ K G +D
Sbjct: 320 PNKVT-YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 378
Query: 283 VRRLLAQSGSSLVNGDYLDIIHALAVSGHG----EYIDEVSAIVCFVNICFH-------W 331
+ + +G +Y I+ AL +G+ E +++ + C N+ + W
Sbjct: 379 IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALW 438
Query: 332 LEG---------PMMSQAGLEPSAQTYTKLMCGYAKHG 360
G P M G++P TY L+ + G
Sbjct: 439 SCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDG 476
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
+ P ++S YN ++ + + S+GI+P+ +TY LIS C+
Sbjct: 421 MGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISC------LCR 474
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
DG +E A +L+ M F + +N ++ G + + A G+ M + G P+ T
Sbjct: 475 DGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETT 534
Query: 197 YTKLMCGYAKHG 208
Y L+ G G
Sbjct: 535 YILLIEGIGFAG 546
Score = 42.7 bits (99), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 6/130 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI +YN +L N + + KL G PN +Y + +IS G+
Sbjct: 391 DIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSY------NTMISALWSCGDRS 444
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ M K E +N+LI + + A G+L M Q+G P+ +Y ++
Sbjct: 445 RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 504
Query: 202 CGYAKHGDMD 211
G K +D
Sbjct: 505 LGLCKVRRID 514
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 129/326 (39%), Gaps = 61/326 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN ++ Y L + +G+ PN LIS + +I+ C++G ++
Sbjct: 237 NVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPN------LISYNVVINGLCREGQMK 290
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
++ILE M + + FN LI G+ + A + M + GL P+ TYT L+
Sbjct: 291 ETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLI 350
Query: 202 CGYAKHGDMDSIKTKIPSLKPQ-----------------SELFLCFSFQLT--------- 235
K G+++ + ++ + + FL ++Q+
Sbjct: 351 NSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFT 410
Query: 236 ------NLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
N LI + M A G+L M + G P +Y+ ++ G+ ++ +++ +L
Sbjct: 411 PTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQL 470
Query: 287 LAQSGSSLVNGD---YLDIIHALAVSGH-GEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
+ + ++ D Y +I L GE D L M+S GL
Sbjct: 471 KVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCD---------------LFQEMLS-LGL 514
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRL 368
P TYT L+ Y GD+D RL
Sbjct: 515 PPDEVTYTSLINAYCIEGDLDKALRL 540
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK---------LIS 132
DI YN L+ + T L KL + PN +TY LI N L+
Sbjct: 552 DIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMK 611
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C G + A ++LE M K + ++E V+N +I+GHS+ ++ A + M +G P
Sbjct: 612 GFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAP 671
Query: 193 SAQTYTKL 200
+ T L
Sbjct: 672 HSVTIMAL 679
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+FL ++ +G+ PN TY + LI + Q G ++ A +I++ M + F + +N
Sbjct: 364 EFLDQMRDRGLHPNGRTY------TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYN 417
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD-SIKTKI----- 217
ALI GH M A G+L M + G P +Y+ ++ G+ ++ +++ + + K+
Sbjct: 418 ALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAK 477
Query: 218 ---PSLKPQSELF-----------LCFSFQ-------------LTNLL--ILVSSDMASA 248
P + S L +C FQ T+L+ + D+ A
Sbjct: 478 GISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKA 537
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ M Q G P TY L+ G+ K +RLL +
Sbjct: 538 LRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLK 578
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 125/302 (41%), Gaps = 36/302 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E V ++ YN L+R + + F ++E G PN VTY + +I YC
Sbjct: 196 ESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTY------NTIIDAYC 249
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ I A K+L M K + +N +I G + M IL MS+ P
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL-CFSFQLTNLLILVSS-----DMASAE 249
T+ L+ GY G+ +L +E+ S + L++S ++ A
Sbjct: 310 TFNTLINGYCNVGNFHQ------ALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHAL 306
L M GL P+ +TYT L+ G+++ G + + + + ++G + Y +I+
Sbjct: 364 EFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGH 423
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
+ G +++ S ++ M + G P +Y+ ++ G+ ++ +++
Sbjct: 424 CILGR---MEDASGLL------------QEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468
Query: 367 RL 368
+L
Sbjct: 469 QL 470
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 125/303 (41%), Gaps = 47/303 (15%)
Query: 120 TYQQLISNS---KLISKYCQDGN-IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
+Y Q S+S L+ K C N I A I+ + F +NA++ +
Sbjct: 124 SYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQS 183
Query: 176 AS-AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234
AEGI M ++G+ P+ TY L+ G+ G+++ ++ L ++
Sbjct: 184 VKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNT 243
Query: 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ----- 289
+ A +L +M+ GL P+ +Y ++ G + G M +L +
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303
Query: 290 ------SGSSLVNGDYLD--------IIHALAVSGHGEYIDEVSAIVCFVNIC------- 328
+ ++L+NG Y + ++HA V +G + V+ ++C
Sbjct: 304 YVPDRVTFNTLING-YCNVGNFHQALVLHAEMVK-NGLSPNVVTYTTLINSMCKAGNLNR 361
Query: 329 -FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNG--------SSL 376
+L+ M GL P+ +TYT L+ G+++ G + I + + +NG ++L
Sbjct: 362 AMEFLD--QMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNAL 419
Query: 377 VNG 379
+NG
Sbjct: 420 ING 422
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/317 (20%), Positives = 135/317 (42%), Gaps = 26/317 (8%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L + S+ I PN +T+ LI + ++G ++ A ++ + M K + +N+
Sbjct: 262 LLKDMTSRKIIPNVITFNVLID------VFVKEGKLQEANELYKEMITKGISPNTITYNS 315
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
L+ G+ N ++ A +L +M + P T+T L+ GY K +D + +
Sbjct: 316 LMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRG 375
Query: 225 ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ ++ + S + AE + M G+ P TY L+ G +G ++
Sbjct: 376 LVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKAL 435
Query: 285 RLLAQSGSSLVNGDYLDIIHALAVSG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
+ S +N D +++ + + G G +++ + C + G+
Sbjct: 436 EIFEDLQKSKMNLDI--VMYTIIIEGMCKGGKVEDAWNLFC------------SLPCKGV 481
Query: 343 EPSAQTYTKLMCGYAKHGDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDE 399
+P+ TYT ++ G K G + + R + ++G+ + Y +I A G +
Sbjct: 482 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAK 541
Query: 400 IISKIQPGVGYSADAAN 416
+I +++ G+SADA++
Sbjct: 542 LIEEMKS-CGFSADASS 557
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 90/426 (21%), Positives = 158/426 (37%), Gaps = 70/426 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN+++ + T D L K++ + ++ + TY S +I C+DG I+
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTY------STIIDSLCRDGCID 222
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + + M K S +N+L+ G +A +L M+ + P+ T+ L+
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282
Query: 202 CGYAKHGDMDS---------IKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
+ K G + K P+ + L + Q + ++ A +L
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQ---------NRLSEANNML 333
Query: 253 TMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-SGSSLVNG--DYLDIIHALAVS 309
+M + P T+T L+ GY K +D +L + S LV Y ++ S
Sbjct: 334 DLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQS 393
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G E +E+ F M G+ P TY L+ G +G ++ +
Sbjct: 394 GKLEIAEEL----------FQE-----MVSLGVLPDVMTYGILLDGLCDNGKLEKALEIF 438
Query: 370 AQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLIN 423
S +N D Y II + G E + + P G + + I L
Sbjct: 439 EDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSL-PCKGVKPNVMTYTVMISGLCK 497
Query: 424 KGQIDAAYRIV---------------NTLARSANINGEQLPVGGFLVRHMVKTNQPGVGY 468
KG + A ++ NTL R A++ L L+ M G+
Sbjct: 498 KGSLSEANILLRKMEEDGNEPNDCTYNTLIR-AHLRDGDLTASAKLIEEM-----KSCGF 551
Query: 469 SADAAN 474
SADA++
Sbjct: 552 SADASS 557
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 102/269 (37%), Gaps = 24/269 (8%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
DF K+E GI N T +I+ K C ++ G L + D T FN
Sbjct: 86 DFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTT------TFN 139
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
LI G + ++ A ++ M + G +P+ TY ++ G K GD + + +
Sbjct: 140 TLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDER 199
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ F++ + + +A + M G++ S TY L+ G K G +
Sbjct: 200 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDG 259
Query: 284 RRLLAQSGSSLVNGDYLD---IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
+LL S + + + +I G + +E L M+++
Sbjct: 260 VQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANE--------------LYKEMITK- 304
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G+ P+ TY LM GY + +L
Sbjct: 305 GISPNTITYNSLMDGYCMQNRLSEANNML 333
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
LDI Y ++ + L +G++PN +TY + +IS C+ G++
Sbjct: 448 LDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTY------TVMISGLCKKGSL 501
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
A +L M + ++ +N LI H + D+ ++ ++ M G A +
Sbjct: 502 SEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 557
>gi|242063818|ref|XP_002453198.1| hypothetical protein SORBIDRAFT_04g001540 [Sorghum bicolor]
gi|241933029|gb|EES06174.1| hypothetical protein SORBIDRAFT_04g001540 [Sorghum bicolor]
Length = 393
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 15/243 (6%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIE-----PNRVTYQQLISNSKLIS 132
DVPL LLR F+ L KL G + PN L++ + ++
Sbjct: 117 DVPLPTHSLALLLRRLATTRSVFAARGLLDKLHPAGEDDGAPRPNPAPRGALLALADVV- 175
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
C G + + IL +RD ++NAL+ H A+D + + M G++P
Sbjct: 176 --CHRGGLREISSILPVLRDHGVRADAHLYNALMKAHVAADDPGAVLRVFRQMKDDGVDP 233
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL--ILVSSDMASAEG 250
TY L+ G A+ G + + I ++ + L ++ T+L+ + V D A
Sbjct: 234 DLVTYNTLIFGLARAGMVRKARAFIHAMAAEGHLPDVITY--TSLMNGMCVQGDALGALK 291
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS---VRRLLAQSGSSLVNGDYLDIIHALA 307
+L M G +P+ +TY L+ G K+ +D V + + +G L + Y + AL
Sbjct: 292 LLEEMEAEGCQPNERTYNTLLMGLCKNKKLDKAVEVYKSMVGAGMKLDSPAYASYVRALC 351
Query: 308 VSG 310
SG
Sbjct: 352 RSG 354
>gi|168019209|ref|XP_001762137.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686541|gb|EDQ72929.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 513
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 115/286 (40%), Gaps = 28/286 (9%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP ++ + ++ +Y H+ + P+ TY + LI+ + ++G
Sbjct: 202 VPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTY------TALINAHAREG 255
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
N A +I ++ F +NAL+ +S+ A A+ + M +AG++ +Y
Sbjct: 256 NCVRAEEIFAELQSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETMLEAGVKADHVSYN 315
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS-----DMASAEGILT 253
L+ + + G + + S+K + F + + ++L+S+ + AE +
Sbjct: 316 ILIDAFGRAGLISDAQAIYDSMKK-----VGFKPTMKSHILLLSAFVKAGRVTDAENFVR 370
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
+ G+EP + L+ Y G MD + L S+ D + + + V G
Sbjct: 371 RLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQGSVCKPDIITLNTLINVYAQGG 430
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
YI+ I F+ LE G P ++T LM Y+K
Sbjct: 431 YIERAEEI-------FNSLE-----SKGFTPDVMSWTSLMGAYSKR 464
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 139/343 (40%), Gaps = 33/343 (9%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+P + S +N L+ Y L +++ P VTY + ++++K G
Sbjct: 133 LPTETS-FNVLMAAYSRGGQLERAERVLHEMKESNCSPGLVTYNTYL---EVLNK---SG 185
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ + A + M+++ P + F +I + +A+ A AE + M +A PS TYT
Sbjct: 186 SWQLAEDVFREMQNRGVPPAVNTFTLMINIYGKAHHSAKAEHLFQSMRKALCPPSLFTYT 245
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSD--MASAEGILTMMS 256
L+ +A+ G+ + L QS F+ + LL S A A+ + M
Sbjct: 246 ALINAHAREGNCVRAEEIFAEL--QSVGFVPDIYTYNALLEAYSRGGHPAGAKEVFETML 303
Query: 257 QAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGE 313
+AG++ +Y L+ + + G D ++ + + G ++ ++ A +G
Sbjct: 304 EAGVKADHVSYNILIDAFGRAGLISDAQAIYDSMKKVGFKPTMKSHILLLSAFVKAGR-- 361
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNG 373
V+ FV + G+EP + L+ Y G MD + L
Sbjct: 362 ----VTDAENFVR---------RLESMGVEPDTFMFNSLLGAYGNSGRMDKMESLYESMQ 408
Query: 374 SSLVNGDYL---DIIHALAVSGHGEYIDEIISKIQPGVGYSAD 413
S+ D + +I+ A G+ E +EI + ++ G++ D
Sbjct: 409 GSVCKPDIITLNTLINVYAQGGYIERAEEIFNSLE-SKGFTPD 450
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 118/303 (38%), Gaps = 38/303 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YNAL++ + + L K+ + G+ P+ VTY LI C DG+IE
Sbjct: 180 NVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQ------CIDGHIE 233
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M + +NALI + A + + G++P+A T+ L+
Sbjct: 234 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 293
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI--LTM 254
G K G D K P + + F L + S EG+ +
Sbjct: 294 NGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM-------KGSQEGLSFIGE 346
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
M Q ++PS YT ++ K + V R + SS N D Y + A + G
Sbjct: 347 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 406
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
++E ++ +E MS+ G+ Y LM G+A G D +L Q
Sbjct: 407 ---LNEAENVL---------ME---MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 451
Query: 372 NGS 374
S
Sbjct: 452 MTS 454
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 148/366 (40%), Gaps = 33/366 (9%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L ++ +G+ P VT + +I+ YC++G + A ++LE M+ + + +N
Sbjct: 132 EMLQEMFEKGLAPCVVTC------TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYN 185
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
AL+ G + A +L M G+ P A TY L+ G G ++S + ++
Sbjct: 186 ALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD 245
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ +++ + A + + G++P+A T+ L+ G K G D
Sbjct: 246 GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIA 305
Query: 284 RRLLAQSGSSLVNGD---YLDII-HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+ L + S+ D Y I H + G E + + G M+ Q
Sbjct: 306 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFI---------------GEML-Q 349
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEY 396
++PS YT ++ K + + R + SS N D Y + A + G
Sbjct: 350 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 409
Query: 397 IDEIISKI-QPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLARSANINGEQLPVGGFL 454
+ ++ ++ + GV A N + + GQ D A I+ + A++ + L
Sbjct: 410 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYF--IL 467
Query: 455 VRHMVK 460
+RH+V+
Sbjct: 468 LRHLVR 473
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
PN TY S ++ + +DG E AT ++ M++ + ++E ++ AL+ ++
Sbjct: 511 PNSGTY------SSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRY 564
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI--PSLKPQSELFLCFSFQ 233
A ++ M Q G P +Y L+ G G D K K S + +
Sbjct: 565 LDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVI 624
Query: 234 LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKL 270
+ L+ SD++ ++ M+ + PS QTY L
Sbjct: 625 IDGLIKKGHSDISRE--MIIMLERMNCRPSHQTYAML 659
>gi|115440435|ref|NP_001044497.1| Os01g0793200 [Oryza sativa Japonica Group]
gi|113534028|dbj|BAF06411.1| Os01g0793200, partial [Oryza sativa Japonica Group]
Length = 235
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 153 KTFPISEGV------FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
+TFP + V FNA+I +++ S +L M Q G++P+A T+T + G+ K
Sbjct: 2 QTFPDAYSVKPNTDTFNAIIKSFAESGTTRSFYSVLDEMCQKGVKPNATTFTTAIAGFYK 61
Query: 207 HGDMDSIKTKIPSLKPQS--ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
D + I +K E F+ ++ L L S A+ +L M + G +PS
Sbjct: 62 EERFDDVGKVIELMKKHGCGESLPVFNVRVQGLCKLGRS--GDAKALLNEMVKKGTKPSW 119
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSG 310
TY L+ G+ K GD++ +RL + + GD Y +I+ L G
Sbjct: 120 LTYNHLIHGFCKEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGG 168
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 88/204 (43%), Gaps = 6/204 (2%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+NA+++ + ++ T S L ++ +G++PN T+ I+ + ++ + K
Sbjct: 17 FNAIIKSFAESGTTRSFYSVLDEMCQKGVKPNATTFTTAIAG------FYKEERFDDVGK 70
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
++E M+ S VFN + G + A+ +L M + G +PS TY L+ G+
Sbjct: 71 VIELMKKHGCGESLPVFNVRVQGLCKLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGFC 130
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K GD++ K + + + + + + D +A G+ ++ P
Sbjct: 131 KEGDLEEAKRLYKEMAKKGLVGDSSFYYMLIYYLCKGGDFDTAVGVYNEIAARNWVPCFS 190
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ 289
T L+ G A +D + ++ +
Sbjct: 191 TMKMLVNGLAGSSRVDEAKGIIEK 214
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 27/151 (17%)
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
+L M Q G++P+A T+T + G+ K D V + +I + G
Sbjct: 36 VLDEMCQKGVKPNATTFTTAIAGFYKEERFDDVGK----------------VIELMKKHG 79
Query: 311 HGEYIDEVSAIVCFVNICFHWLEGPM------MSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
GE + + V +C G M + G +PS TY L+ G+ K GD++
Sbjct: 80 CGESLPVFNVRV--QGLCKLGRSGDAKALLNEMVKKGTKPSWLTYNHLIHGFCKEGDLEE 137
Query: 365 IRRLLAQNGSSLVNGD---YLDIIHALAVSG 392
+RL + + GD Y +I+ L G
Sbjct: 138 AKRLYKEMAKKGLVGDSSFYYMLIYYLCKGG 168
Score = 41.6 bits (96), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L ++ +G +P+ +TY LI +C++G++E A ++ + M K + L
Sbjct: 107 LNEMVKKGTKPSWLTYNHLIHG------FCKEGDLEEAKRLYKEMAKKGLVGDSSFYYML 160
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
IY + D +A G+ ++ P T L+ G A +D K I +K +
Sbjct: 161 IYYLCKGGDFDTAVGVYNEIAARNWVPCFSTMKMLVNGLAGSSRVDEAKGIIEKMKEK 218
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 113/289 (39%), Gaps = 59/289 (20%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN +L E K+ Q I PN VTY LI+ C+ IE A +
Sbjct: 152 YNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLING------LCKAWRIETAYE 205
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M K + +E +N LI G + D+ +A+ + M ++ P+ TYT L+ G +
Sbjct: 206 LFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLS 265
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G + A+AE +L M + G+ P+
Sbjct: 266 KSGKVQ----------------------------------AAAE-VLDGMVKKGVTPNVA 290
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TY+ L+ G+ K +D +LL Q G + Y ++++L + +++
Sbjct: 291 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLC---RADKLEDA---- 343
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
F G M+Q P+ TY L+ H +D RL A+
Sbjct: 344 ------FKLFRG--MAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAE 384
Score = 43.9 bits (102), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 112/270 (41%), Gaps = 34/270 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LIS C+ GN + A K+L MR K F ++ +I + N + A ++ M++
Sbjct: 51 LISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA 110
Query: 190 LEPSAQTY---TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA 246
P A TY + +C + D + ++ + + + F+ ++F L+ L +
Sbjct: 111 -PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFI-YNFVLSGL--CQEEKVE 166
Query: 247 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSSLV 295
A + M + + P+ TY L+ G K +++ L + S ++L+
Sbjct: 167 EARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLI 226
Query: 296 NG--DYLDIIHALAVSGHGEYIDEVSAIVCF------------VNICFHWLEGPMMSQAG 341
+G D++ A V + V +V + V L+G M + G
Sbjct: 227 DGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDG--MVKKG 284
Query: 342 LEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+ P+ TY+ L+ G+ K +D +LL Q
Sbjct: 285 VTPNVATYSCLIDGFCKVRRVDEAHKLLEQ 314
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 129/326 (39%), Gaps = 61/326 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN ++ Y L + +G+ PN LIS + +I+ C++G ++
Sbjct: 237 NVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPN------LISYNVVINGLCREGQMK 290
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
++ILE M + + FN LI G+ + A + M + GL P+ TYT L+
Sbjct: 291 ETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLI 350
Query: 202 CGYAKHGDMDSIKTKIPSLKPQ-----------------SELFLCFSFQLT--------- 235
K G+++ + ++ + + FL ++Q+
Sbjct: 351 NSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFT 410
Query: 236 ------NLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
N LI + M A G+L M + G P +Y+ ++ G+ ++ +++ +L
Sbjct: 411 PTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQL 470
Query: 287 LAQSGSSLVNGD---YLDIIHALAVSGH-GEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
+ + ++ D Y +I L GE D L M+S GL
Sbjct: 471 KVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCD---------------LFQEMLS-LGL 514
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRL 368
P TYT L+ Y GD+D RL
Sbjct: 515 PPDEVTYTSLINAYCIEGDLDKALRL 540
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSK---------LIS 132
DI YN L+ + T L KL + PN +TY LI N L+
Sbjct: 552 DIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMK 611
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+C G + A ++LE M K + ++E V+N +I+GHS+ ++ A + M +G P
Sbjct: 612 GFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAP 671
Query: 193 SAQTYTKL 200
+ T L
Sbjct: 672 HSVTIMAL 679
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 41/221 (18%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+FL ++ +G+ PN TY + LI + Q G ++ A +I++ M + F + +N
Sbjct: 364 EFLDQMRDRGLHPNGRTY------TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYN 417
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD-SIKTKI----- 217
ALI GH M A G+L M + G P +Y+ ++ G+ ++ +++ + + K+
Sbjct: 418 ALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAK 477
Query: 218 ---PSLKPQSELF-----------LCFSFQ-------------LTNLL--ILVSSDMASA 248
P + S L +C FQ T+L+ + D+ A
Sbjct: 478 GISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKA 537
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ M Q G P TY L+ G+ K +RLL +
Sbjct: 538 LRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLK 578
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 125/302 (41%), Gaps = 36/302 (11%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E V ++ YN L+R + + F ++E G PN VTY + +I YC
Sbjct: 196 ESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTY------NTIIDAYC 249
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ I A K+L M K + +N +I G + M IL MS+ P
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL-CFSFQLTNLLILVSS-----DMASAE 249
T+ L+ GY G+ +L +E+ S + L++S ++ A
Sbjct: 310 TFNTLINGYCNVGNFHQ------ALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVRRLLAQSGSSLVNGDYLDIIHAL 306
L M GL P+ +TYT L+ G+++ G + + + + ++G + Y +I+
Sbjct: 364 EFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGH 423
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
+ G +++ S ++ M + G P +Y+ ++ G+ ++ +++
Sbjct: 424 CILGR---MEDASGLL------------QEMIERGFIPDVVSYSTIISGFCRNQELEKAF 468
Query: 367 RL 368
+L
Sbjct: 469 QL 470
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 125/303 (41%), Gaps = 47/303 (15%)
Query: 120 TYQQLISNS---KLISKYCQDGN-IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
+Y Q S+S L+ K C N I A I+ + F +NA++ +
Sbjct: 124 SYYQCKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQS 183
Query: 176 AS-AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQL 234
AEGI M ++G+ P+ TY L+ G+ G+++ ++ L ++
Sbjct: 184 VKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNT 243
Query: 235 TNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ----- 289
+ A +L +M+ GL P+ +Y ++ G + G M +L +
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303
Query: 290 ------SGSSLVNGDYLD--------IIHALAVSGHGEYIDEVSAIVCFVNIC------- 328
+ ++L+NG Y + ++HA V +G + V+ ++C
Sbjct: 304 YVPDRVTFNTLING-YCNVGNFHQALVLHAEMVK-NGLSPNVVTYTTLINSMCKAGNLNR 361
Query: 329 -FHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNG--------SSL 376
+L+ M GL P+ +TYT L+ G+++ G + I + + +NG ++L
Sbjct: 362 AMEFLD--QMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNAL 419
Query: 377 VNG 379
+NG
Sbjct: 420 ING 422
>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 445
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 95/217 (43%), Gaps = 12/217 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L +++ + + + ++++ + PN TY +I+ Y G I+
Sbjct: 165 DVVSYNTLAQLFAKLGKPWDAENVITEMQNVYLRPNERTY------GIVINGYIAAGQID 218
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ +++E M+ + VFN L+ G+S++ + + +M G++P QT+ +M
Sbjct: 219 ESLRLIERMKMDGISPTIAVFNHLVKGYSESMKPHKVDKVFKLMENFGVKPDVQTFGLIM 278
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMA---SAEGILTMMSQA 258
+ G +D K + +K E L ++L+ S E L +M
Sbjct: 279 NAWCSTGLIDEAKAVLLRMK---EYDLQPDVMAYSILVKGYSRQGRPEEGEAFLNIMIDE 335
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLV 295
L+P+ TYT ++ GY MD R+ + S V
Sbjct: 336 NLKPNVITYTTVISGYCSLAQMDDAMRVFQEMRSRSV 372
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 130/330 (39%), Gaps = 45/330 (13%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVY-LDNEHTFSPTDFLAKLESQGIE----P 116
G + + + E PL S YN L++ Y LD + P + + L+ + P
Sbjct: 74 GKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLDGQ----PEEAMKLLQEMAKDVNSKP 129
Query: 117 NRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
N T+ LI + D N E A ++ MR +N L ++
Sbjct: 130 NDRTFNMLIK------AWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKLGKPW 183
Query: 177 SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFS 231
AE ++T M L P+ +TY ++ GY G +D + K+ + P +F
Sbjct: 184 DAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVF---- 239
Query: 232 FQLTNLLILVSSDMA--SAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+L+ S M + + +M G++P QT+ +M + G +D + +L +
Sbjct: 240 ---NHLVKGYSESMKPHKVDKVFKLMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLR 296
Query: 290 SGSSLVNGDYLDIIHALAVSGHGE--YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
+ D + +++ V G+ +E A F+NI M L+P+
Sbjct: 297 MKEYDLQPDVM--AYSILVKGYSRQGRPEEGEA---FLNI---------MIDENLKPNVI 342
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
TYT ++ GY MD R+ + S V
Sbjct: 343 TYTTVISGYCSLAQMDDAMRVFQEMRSRSV 372
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 114/299 (38%), Gaps = 52/299 (17%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L L G P + TY L+S+ LIS DG + +L+ M + FN L
Sbjct: 13 LKNLRRDGHRPAKETYTLLLSS--LIS----DGRLGEGPLLLQQMEEDNVIPDAIFFNTL 66
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSL----- 220
+ G+ +A M AE ++ M + G +Y L+ GY G + + +
Sbjct: 67 LNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQEMAKDVN 126
Query: 221 -KPQSELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 276
KP F N+LI + A +++MM AG+ P +Y L +AK
Sbjct: 127 SKPNDRTF--------NMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAK 178
Query: 277 HGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE---------VSAIVCF 324
G ++ + + + + Y +I+ +G IDE + I
Sbjct: 179 LGKPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQ---IDESLRLIERMKMDGISPT 235
Query: 325 VNICFHWLEG--------------PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+ + H ++G +M G++P QT+ +M + G +D + +L
Sbjct: 236 IAVFNHLVKGYSESMKPHKVDKVFKLMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVL 294
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 11/153 (7%)
Query: 43 VLLFVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSP 102
V F + + WCS G + + E D+ D+ Y+ L++ Y
Sbjct: 271 VQTFGLIMNAWCST-----GLIDEAKAVLLRMKEYDLQPDVMAYSILVKGYSRQGRPEEG 325
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
FL + + ++PN +TY + +IS YC ++ A ++ + MR ++ + F
Sbjct: 326 EAFLNIMIDENLKPNVITY------TTVISGYCSLAQMDDAMRVFQEMRSRSVFPNMQTF 379
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
LI+G +A AE IL + +AG P +
Sbjct: 380 RTLIWGFKEARWPRRAEEILEYIRKAGFTPDLE 412
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 139/362 (38%), Gaps = 64/362 (17%)
Query: 207 HGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLLILVSSDMASAEG--ILTMMSQAG 259
GD +++ + +L+ P E + T LL + SD EG +L M +
Sbjct: 3 RGDHRQVRSTLKNLRRDGHRPAKETY-------TLLLSSLISDGRLGEGPLLLQQMEEDN 55
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
+ P A + L+ GY + G M L + + G L+ Y +I + G E
Sbjct: 56 VIPDAIFFNTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLDGQPE--- 112
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
E ++ M +P+ +T+ L+ +A + + R +++ ++
Sbjct: 113 EAMKLL-----------QEMAKDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAG 161
Query: 377 VNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAA 430
V D Y + A G + +I+++Q V + + I I GQID +
Sbjct: 162 VGPDVVSYNTLAQLFAKLGKPWDAENVITEMQ-NVYLRPNERTYGIVINGYIAAGQIDES 220
Query: 431 YRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYR 490
R++ + ++G + F H+VK GYS H ++D ++
Sbjct: 221 LRLIERM----KMDGISPTIAVF--NHLVK------GYSESMKPH--------KVDKVFK 260
Query: 491 IVNTLARSANINGEQLPVGGFLVRHMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIK 550
++ ++ G ++ T ID+ AV R+ + +L P ++L+K
Sbjct: 261 LMENFGVKPDVQ-----TFGLIMNAWCSTGL-IDEAKAVLLRMKEYDLQPDVMAYSILVK 314
Query: 551 AH 552
+
Sbjct: 315 GY 316
>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 591
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 119/285 (41%), Gaps = 42/285 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN ++ +Y ++ ++ S +PN TY + L++ + ++G E A +
Sbjct: 267 YNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY------TALVNAFAREGLCEKAEE 320
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
I E +++ V+NAL+ +S+A A I ++M G EP +Y ++ Y
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 380
Query: 206 K---HGDMDSIKTKI------PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
+ H D +++ ++ P++K L +S + D+ E I+ MS
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS---------KARDVTKCEAIVKEMS 431
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE 313
+ G+EP ++ Y + G + ++LA+ + D Y +I+ +G E
Sbjct: 432 ENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLE 491
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
I+E+ FV + + P T+T + Y++
Sbjct: 492 RIEEL-----FVE----------LKEKNFRPDVVTWTSRIGAYSR 521
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 82/199 (41%), Gaps = 14/199 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YNAL+ Y + + + + ++ G EP+R +Y + ++ Y + G
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY------NIMVDAYGRAGLHS 386
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + E M+ + L+ +S+A D+ E I+ MS+ G+EP ++
Sbjct: 387 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 446
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFS-FQLTNLLILVSSD---MASAEGILTMMSQ 257
Y + G TK+ + + E C + N+LI + + E + + +
Sbjct: 447 NLYGRLGQF----TKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKE 502
Query: 258 AGLEPSAQTYTKLMCGYAK 276
P T+T + Y++
Sbjct: 503 KNFRPDVVTWTSRIGAYSR 521
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 115/280 (41%), Gaps = 29/280 (10%)
Query: 136 QDGNIEGATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ GN E A + + M RD+ P +E +N +I + +A+ + + M +P+
Sbjct: 241 RKGNTEEAIDVFQRMKRDRCKPTTE-TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNI 299
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG---I 251
TYT L+ +A+ G + + L+ L + N L+ S G I
Sbjct: 300 CTYTALVNAFAREGLCEKAEEIFEQLQEDG---LEPDVYVYNALMESYSRAGYPYGAAEI 356
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAK---HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
++M G EP +Y ++ Y + H D ++V + + G + ++ ++ A +
Sbjct: 357 FSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS- 415
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
+ + AIV MS+ G+EP ++ Y + G + ++
Sbjct: 416 --KARDVTKCEAIV------------KEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKI 461
Query: 369 LAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQ 405
LA+ + D Y +I+ +G E I+E+ +++
Sbjct: 462 LAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK 501
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 105/265 (39%), Gaps = 30/265 (11%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNI-EGATKILEFMRDKTFPISEGVFNALIYGH 169
S G++P+R+T+ L++ C G + E A ++ M DK +N L+
Sbjct: 289 SNGVQPDRITFNSLLA-------VCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAV 341
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLC 229
+ M A I++ M + P+ TY+ ++ GYAK G +D +K FL
Sbjct: 342 CKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMK-----FLG 396
Query: 230 FSFQLT--NLLILVSSDMASAEGILTM---MSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
N L+ V + + E L + M AG+ TY L+ GY K D VR
Sbjct: 397 VGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVR 456
Query: 285 RLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
R+ + V+ + L + V G E + QAGL+
Sbjct: 457 RVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVF------------REFKQAGLKA 504
Query: 345 SAQTYTKLMCGYAKHGDMDSIRRLL 369
Y+ L+ K+G ++S LL
Sbjct: 505 DVVLYSALIDALCKNGLVESSVTLL 529
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 103/291 (35%), Gaps = 62/291 (21%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE--GA 143
++AL+ Y + + ++S G+ PN VTY +I C G +E
Sbjct: 228 FSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDA-------CGKGGVEFKKV 280
Query: 144 TKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCG 203
+I + M FN+L+ S+ +A + + M G++ TY L+
Sbjct: 281 VEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDA 340
Query: 204 YAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPS 263
K G MD L F I++ M + P+
Sbjct: 341 VCKGGQMD----------------LAFE-------------------IMSEMPTKNILPN 365
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQS---GSSLVNGDYLDIIHALAVSGHGEYIDEVSA 320
TY+ ++ GYAK G +D + + G L Y ++ A G E
Sbjct: 366 VVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQA----- 420
Query: 321 IVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+++C M AG+ TY L+ GY K D +RR+ +
Sbjct: 421 ----LDVC------KEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEE 461
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 84/211 (39%), Gaps = 16/211 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN LL + ++++ ++ I PN VTY S +I Y + G ++
Sbjct: 330 DIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTY------STMIDGYAKVGRLD 383
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + M+ + +N L+ +++ A + M AG+ TY L+
Sbjct: 384 DALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALL 443
Query: 202 CGYAKHGDMDSIKTKIPSLKPQ--SELFLCFSFQLTNLLILVSSD---MASAEGILTMMS 256
GY K D ++ +K S L +S LI V S A +
Sbjct: 444 AGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYS-----TLIDVYSKGGLYKEAMEVFREFK 498
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
QAGL+ Y+ L+ K+G ++S LL
Sbjct: 499 QAGLKADVVLYSALIDALCKNGLVESSVTLL 529
Score = 40.0 bits (92), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
L V LD YN LL VY D ++E+ GI + VTY L++ Y +
Sbjct: 395 LGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAG------YGK 448
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+ ++ E M+ + ++ LI +S+ A + QAGL+
Sbjct: 449 QYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVL 508
Query: 197 YTKLMCGYAKHGDMDS 212
Y+ L+ K+G ++S
Sbjct: 509 YSALIDALCKNGLVES 524
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 16/206 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y ++ + L K+ G++PN VTY LI C+ G+I A
Sbjct: 482 YTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTY------CALIDGLCKAGSIYEAIS 535
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ MR+ + V+ LI G + ++ A ++ M G+ YT L+ G+
Sbjct: 536 HFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHM 595
Query: 206 KHGDMD---SIKTKIPSLKPQSELFL--CFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
K GD+ ++K K+ Q +L+ CF N+ + M A G+L+ M G+
Sbjct: 596 KQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNM-----NMMQEARGVLSEMIGTGI 650
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRL 286
P Y L+ Y K G+M+ L
Sbjct: 651 TPDKTAYNCLIRKYQKLGNMEEASSL 676
Score = 60.5 bits (145), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 118/271 (43%), Gaps = 26/271 (9%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
A++ +G+ PN TY L+ + C+ G ++ A +L+ M + + +
Sbjct: 326 LFAQMRVRGMMPNEFTYTSLVDGT------CKAGRLDDAIVLLDEMVHQGLVPNVVTYTV 379
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS 224
++ G + +A A+ +L++M +AG++ + YT L+ G+ + + + + +K +
Sbjct: 380 MVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKG 439
Query: 225 -ELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
EL + L L V + A+ +L M GL P+ YT +M + K G
Sbjct: 440 MELDVSLYGTLIWGLCKVQK-LDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEA 498
Query: 284 RRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA 340
LL + S + + Y +I L +G + +S H+ M +
Sbjct: 499 VALLHKIPDSGLQPNVVTYCALIDGLCKAG--SIYEAIS----------HF---DKMREL 543
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
GL+P+ Q YT L+ G+ K G + L+ +
Sbjct: 544 GLDPNVQVYTTLIDGFCKIGSLSKAVHLMNE 574
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 109/281 (38%), Gaps = 46/281 (16%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ QG+ PN VTY + ++ C++G + A +L M +E ++
Sbjct: 361 LLDEMVHQGLVPNVVTY------TVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTT 414
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI-----PS 219
LI+GH + A +L M G+E Y L+ G K +D K+ +
Sbjct: 415 LIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCG 474
Query: 220 LKPQSELFLCFSFQLTNLL--ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
L+P + ++ T ++ + + A +L + +GL+P+ TY L+ G K
Sbjct: 475 LRPNTVIY-------TTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKA 527
Query: 278 GDM-------DSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFH 330
G + D +R L + Y +I I +S V +N
Sbjct: 528 GSIYEAISHFDKMRELGLDPNVQV----YTTLIDGFC------KIGSLSKAVHLMN---- 573
Query: 331 WLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M G+ YT L+ G+ K GD+ L A+
Sbjct: 574 -----EMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAK 609
Score = 39.3 bits (90), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 104/254 (40%), Gaps = 29/254 (11%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK 221
FN +I + ++ A + M G P TY L+ GY K G+++ ++ + ++
Sbjct: 202 FNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMR 261
Query: 222 PQSELFLCFSFQLT-NLLILVSSDMASAEGILTM---MSQAGLEPSAQTYTKLMCGYAKH 277
C + +T N LI S E + M + G+ + T + + + K
Sbjct: 262 KSG----CAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKE 317
Query: 278 GDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
G + +L AQ G Y ++ +G +D+ AIV L
Sbjct: 318 GLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGR---LDD--AIV---------LLD 363
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDM---DSIRRLLAQNGSSLVNGDYLDIIHALAVS 391
M+ Q GL P+ TYT ++ G K G + D + L+ + G Y +IH ++
Sbjct: 364 EMVHQ-GLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMN 422
Query: 392 GHGEYIDEIISKIQ 405
+ E +++++++
Sbjct: 423 KNSERALDLLNEMK 436
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 121/293 (41%), Gaps = 35/293 (11%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G P+ VTY L++ C++ + A +L MR++ P F LI+G+
Sbjct: 361 GCLPDVVTYNTLLNG------LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIE 414
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+ A + M L P TY L+ G + GD+D + + F
Sbjct: 415 GKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE----IFPN 470
Query: 233 QLTNLLILVS----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
+T +++ S + A G L M G+ P+ TY ++ GY + G++ ++ L
Sbjct: 471 HVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQ 530
Query: 289 QSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ + V+ D Y +IH YI E ++ F L MM + ++P
Sbjct: 531 KMMVNKVSPDLITYNTLIHG--------YIKEDK-----MHDAFKLLN--MMEKEKVQPD 575
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGE 395
TY L+ G++ HG++ + + + + D Y+ +I+ +G+ +
Sbjct: 576 VVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSK 628
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 102/247 (41%), Gaps = 21/247 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E VP D+ + L+ Y + +Q + P+ VTY LI C
Sbjct: 394 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG------MC 447
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ A + + M + + ++ LI H + + A G L M G+ P+
Sbjct: 448 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 507
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSL---KPQSELFLCFSFQLTNLLI---LVSSDMASAE 249
TY ++ GY + G++ + + + K +L N LI + M A
Sbjct: 508 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI------TYNTLIHGYIKEDKMHDAF 561
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
+L MM + ++P TY L+ G++ HG++ + + + + D Y+ +I+
Sbjct: 562 KLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGH 621
Query: 307 AVSGHGE 313
+G+ +
Sbjct: 622 VTAGNSK 628
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ Y+ + L +E + ++P+ VTY LI+ + GN++
Sbjct: 540 DLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLING------FSVHGNVQ 593
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
A I E M K + ++I GH A + A + M Q G P +
Sbjct: 594 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDK 647
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 118/303 (38%), Gaps = 38/303 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YNAL++ + + L K+ + G+ P+ VTY LI C DG+IE
Sbjct: 358 NVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQ------CIDGHIE 411
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M + +NALI + A + + G++P+A T+ L+
Sbjct: 412 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 471
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI--LTM 254
G K G D K P + + F L + S EG+ +
Sbjct: 472 NGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM-------KGSQEGLSFIGE 524
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
M Q ++PS YT ++ K + V R + SS N D Y + A + G
Sbjct: 525 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 584
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
++E ++ +E MS+ G+ Y LM G+A G D +L Q
Sbjct: 585 ---LNEAENVL---------ME---MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 629
Query: 372 NGS 374
S
Sbjct: 630 MTS 632
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/366 (20%), Positives = 146/366 (39%), Gaps = 33/366 (9%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L ++ +G+ P VT + +I+ YC++G + A ++LE M+ + + +N
Sbjct: 310 EMLQEMFEKGLAPCVVTC------TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYN 363
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
AL+ G + A +L M G+ P A TY L+ G G ++S + ++
Sbjct: 364 ALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD 423
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ +++ + A + + G++P+A T+ L+ G K G D
Sbjct: 424 GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIA 483
Query: 284 RRLLAQSGSSLVNGD---YLDII-HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+ L + S+ D Y I H + G E + + M Q
Sbjct: 484 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE----------------MLQ 527
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEY 396
++PS YT ++ K + + R + SS N D Y + A + G
Sbjct: 528 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 587
Query: 397 IDEIISKI-QPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLARSANINGEQLPVGGFL 454
+ ++ ++ + GV A N + + GQ D A I+ + A++ + L
Sbjct: 588 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQF--TYFIL 645
Query: 455 VRHMVK 460
+RH+V+
Sbjct: 646 LRHLVR 651
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
PN TY S ++ + +DG E AT ++ M++ + ++E ++ AL+ ++
Sbjct: 689 PNSGTY------SSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRY 742
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI--PSLKPQSELFLCFSFQ 233
A ++ M Q G P +Y L+ G G D K K S + +
Sbjct: 743 LDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVI 802
Query: 234 LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKL 270
+ L+ SD++ ++ M+ + PS QTY L
Sbjct: 803 IDGLIKKGHSDISRE--MIIMLERMNCRPSHQTYAML 837
>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g12100, mitochondrial; Flags: Precursor
gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 816
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 135/333 (40%), Gaps = 37/333 (11%)
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
LI+ + LI YC+ GN E + K+ E M+ S FN L+ G +A + AE +L
Sbjct: 249 LITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLK 308
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDS----IKTKIPSLKPQSELFLCFSFQLTNLLI 239
M G P A T++ L GY+ + ++ +T + S + + C S L L
Sbjct: 309 EMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS-GVKMNAYTC-SILLNAL-- 364
Query: 240 LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDY 299
+ AE IL GL P+ Y ++ GY + GD+ R + + D+
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 300 LD---IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY 356
L +I G E ++ E M G+ PS +TY L+ GY
Sbjct: 425 LAYNCLIRRFCELGEMENAEK---------------EVNKMKLKGVSPSVETYNILIGGY 469
Query: 357 AKHGDMDS---IRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSAD 413
+ + D I + + NG+ Y +I+ L G +I+ + G S
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC-KGSKLLEAQIVKRDMEDRGVSPK 528
Query: 414 AANHIYHLI-----NKGQIDAAYRIVNTLARSA 441
IY+++ +KG+I+ A+R + +
Sbjct: 529 V--RIYNMLIDGCCSKGKIEDAFRFSKEMLKKG 559
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 83/189 (43%), Gaps = 26/189 (13%)
Query: 109 LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYG 168
+E +G+ P Y LI C G IE A + + M K ++ +N LI G
Sbjct: 520 MEDRGVSPKVRIYNMLIDGC------CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 169 HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQ 223
S ++ AE +L +S+ GL+P TY L+ GY G++ + K +KP
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP- 632
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGI-LT--MMSQAGLEPSAQTYTKLMCGYAKHGDM 280
+ + +LLI + + EGI LT + + L+P Y ++ YA HGDM
Sbjct: 633 -------TLKTYHLLI----SLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDM 681
Query: 281 DSVRRLLAQ 289
+ L Q
Sbjct: 682 EKAFNLQKQ 690
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 171/425 (40%), Gaps = 62/425 (14%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMR-DKTFPISEGVFN 163
FL LES P++ Y + I + +S ++ ++ M+ D+ +P S ++N
Sbjct: 167 FLNILESD-FRPSKFMYGKAIQAAVKLS------DVGKGLELFNRMKHDRIYP-SVFIYN 218
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI-----KTKIP 218
LI G + M AE + M L PS TY L+ GY K G+ + + K
Sbjct: 219 VLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD 278
Query: 219 SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
++P + F+ L L + + AE +L M G P A T++ L GY+ +
Sbjct: 279 HIEPS---LITFNTLLKGL--FKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 279 DMDS---VRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
++ V SG + +++AL G E +E+ G
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL--------------GR 379
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLD---IIHALAVSG 392
M++ GL P+ Y ++ GY + GD+ R + + D+L +I G
Sbjct: 380 EMAK-GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELG 438
Query: 393 HGEYIDEIISKIQ-PGVGYSADAAN-HIYHLINKGQIDAAYRIV----------NTLARS 440
E ++ ++K++ GV S + N I K + D + I+ N ++
Sbjct: 439 EMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYG 498
Query: 441 ANINGEQLPVGGFLVR-HMVKTNQPGVGYSADAANHIYHLI-----NKGQIDAAYRIVNT 494
IN L G L+ +VK + G S IY+++ +KG+I+ A+R
Sbjct: 499 TLINC--LCKGSKLLEAQIVKRDMEDRGVSPKV--RIYNMLIDGCCSKGKIEDAFRFSKE 554
Query: 495 LARSA 499
+ +
Sbjct: 555 MLKKG 559
Score = 47.4 bits (111), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 99/289 (34%), Gaps = 57/289 (19%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
+ YN L+ Y D L ++E G PN V+Y LI+ C+ +
Sbjct: 459 VETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY------GTLINCLCKGSKLLE 512
Query: 143 ATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
A + M D+ ++N LI G + A M + G+E + TY L+
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
G + G ++ AE +L +S+ GL+P
Sbjct: 573 GLSMTG-----------------------------------KLSEAEDLLLEISRKGLKP 597
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
TY L+ GY G++ L + S + L H L E I+
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIK-PTLKTYHLLISLCTKEGIE------ 650
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
L + + L+P Y ++ YA HGDM+ L Q
Sbjct: 651 ---------LTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQ 690
>gi|302757495|ref|XP_002962171.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
gi|300170830|gb|EFJ37431.1| hypothetical protein SELMODRAFT_77736 [Selaginella moellendorffii]
Length = 731
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 157/385 (40%), Gaps = 63/385 (16%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D D++ YN+L+ +Y+ N+ + L ++ G+ P++VT++ LIS Y +
Sbjct: 295 DCCPDVATYNSLIEMYVKNDKLELVSGCLERMRDSGVSPDQVTFRT------LISAYAAN 348
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMM-SQAGLEPSAQT 196
+ A +++ M F I + ++ +I + +A D++ AE + + S+ GLE S T
Sbjct: 349 NVVWKAEALVQEMEGSGFFIDQAMYTVMIAMYVRARDVSKAESVFRFLHSRGGLEVS--T 406
Query: 197 YTKLMCGYAKHGDMDSIK-----TKIPSLKPQSELFLCFSFQLTNLLIL---VSSDMASA 248
Y +M YA+H +D + K LK S L N+++ A
Sbjct: 407 YVGVMDVYAEHKCLDQAREVFELAKNAGLKTPS---------LYNVMMKAYGACDRFTDA 457
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
+ M + G P+ ++ L+ L G L+I+ + V
Sbjct: 458 VTVFEAMEKDGASPNEASFNSLI--------------------QLLCKGRLLEILQRVLV 497
Query: 309 ----SGHGEYIDEVSAIVCFVNICFHWLEGPM----MSQAGLEPSAQTYTKLMCGYAKHG 360
+G + S++V F E M +G+E Y+ L+ YA+ G
Sbjct: 498 LVKAAGFKPSLASCSSVVSFYGDMGRVREAERVFKEMLASGVEADVICYSALLNAYAEAG 557
Query: 361 DMDSIRRLLAQNGS------SLVNGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADA 414
++ L + ++V + + L ++ E I E IS++ P V ++A+
Sbjct: 558 FAREAQQTLDSLKAAGFVPDTIVYTSMMKLYSNLGLTAEAEKIYEEISRLSPDV-FAANT 616
Query: 415 ANHIYHLINKGQIDAAYRIVNTLAR 439
++Y I G A ++ + R
Sbjct: 617 MLNLY--IKSGMFTEAEQLFRAMQR 639
Score = 46.6 bits (109), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 69/307 (22%), Positives = 121/307 (39%), Gaps = 33/307 (10%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP I Y+ L+ V+ F + G+EP+ V ++ + G
Sbjct: 148 VPPTIFTYSILVDVHGRAGMKDEAIRFYRHMIESGVEPDEVMVSTYMNLQRRF------G 201
Query: 139 NIEGATKIL-----EFMRDKTF--PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
++E A K E + D T P + FN +I + + A A + M +AG+E
Sbjct: 202 DLEEAEKAFWGLFSENLVDGTTKRPENPETFNTMISFYGEHAKFAEASKVFAEMMKAGVE 261
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI--LVSSD-MASA 248
+ T+ ++ Y K G + + +K + + C N LI V +D +
Sbjct: 262 LTTVTFNAMIHVYGKAGRTREAELLVTKMKQRKD--CCPDVATYNSLIEMYVKNDKLELV 319
Query: 249 EGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAV 308
G L M +G+ P T+ L+ YA + + L+ + S D +A+
Sbjct: 320 SGCLERMRDSGVSPDQVTFRTLISAYAANNVVWKAEALVQEMEGSGFFIDQAMYTVMIAM 379
Query: 309 SGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
+ + ++ F++ S+ GLE S TY +M YA+H +D R +
Sbjct: 380 YVRARDVSKAESVFRFLH-----------SRGGLEVS--TYVGVMDVYAEHKCLDQAREV 426
Query: 369 --LAQNG 373
LA+N
Sbjct: 427 FELAKNA 433
>gi|224093190|ref|XP_002309826.1| predicted protein [Populus trichocarpa]
gi|222852729|gb|EEE90276.1| predicted protein [Populus trichocarpa]
Length = 1480
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 45/199 (22%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YNA++ VY + LES+G P+ V+Y + L+ + ++GN+E
Sbjct: 360 DLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSY------NSLLYAFAREGNVE 413
Query: 142 GATKILEFMRDKTFPISEGVFNALI--YGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+I E M F E +N +I YG N++A + M +G P A TYT
Sbjct: 414 KVKEIWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELALQ--LYRDMQSSGRNPDAVTYTV 471
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L+ K ++ +A A G+++ M G
Sbjct: 472 LIDSLGK-----------------------------------TNKIAEAAGVMSEMLNTG 496
Query: 260 LEPSAQTYTKLMCGYAKHG 278
++P+ +TY+ L+CGYAK G
Sbjct: 497 VKPTLKTYSALICGYAKAG 515
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 94/257 (36%), Gaps = 53/257 (20%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L ++ G+ P+ +TY LIS S N+E A K+ + M +N
Sbjct: 312 ELLNEVRRSGLRPDTITYNTLISACSRAS------NLEEAAKVFDDMEAHHCQPDLWTYN 365
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
A+I + + AE + + G P A +Y L+ +A+ G+++ +K
Sbjct: 366 AMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSLLYAFAREGNVEKVKE-------- 417
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
I M + G TY ++ Y K G +
Sbjct: 418 ---------------------------IWEEMVKIGFGKDEMTYNTMIHMYGKQGQNELA 450
Query: 284 RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLE 343
+L SS N D + + G I E + ++ M G++
Sbjct: 451 LQLYRDMQSSGRNPDAVTYTVLIDSLGKTNKIAEAAGVM------------SEMLNTGVK 498
Query: 344 PSAQTYTKLMCGYAKHG 360
P+ +TY+ L+CGYAK G
Sbjct: 499 PTLKTYSALICGYAKAG 515
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 108/273 (39%), Gaps = 61/273 (22%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+S +N++L++Y+ E +++ G+EP+ TY + LI YC+D E
Sbjct: 952 DLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTY------NTLIVMYCRDHRPE 1005
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
++ MR AGLEP TY L+
Sbjct: 1006 EGFSLMHEMR-----------------------------------VAGLEPKLDTYKSLV 1030
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS-DMASAEGILTMMSQAGL 260
+ K ++ + L+ + L SF T + I +S + AE + +MM AG+
Sbjct: 1031 ASFGKQQLVEQAEELFEELQSKG-CKLDRSFYHTMMKIYRNSGSHSKAERLFSMMKDAGV 1089
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
EP+ T LM Y G ++L+ ++GS+L Y +I A +G+Y
Sbjct: 1090 EPTIATMHLLMVSYGSSGQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYL--RNGDYNIG 1147
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYT 350
+ ++ M + GLEP + +T
Sbjct: 1148 IQKLI-------------QMKKEGLEPDHRIWT 1167
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 103/276 (37%), Gaps = 35/276 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
++ + + GNI KI M+ + + ++ + S+ + E +L+ M +AG
Sbjct: 889 MLDAFARAGNIFEVKKIYHGMKAAGYFPTMHLYRVMARLLSRGKQVRDVEAMLSEMEEAG 948
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSD 244
+P + ++ Y D + K L+P + + L+++ D
Sbjct: 949 FKPDLSIWNSVLKMYVAIEDFRKTIQVYQRIKEDGLEPDEDTY-------NTLIVMYCRD 1001
Query: 245 MASAEGILTM--MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDY 299
EG M M AGLEP TY L+ + K ++ L L G L Y
Sbjct: 1002 HRPEEGFSLMHEMRVAGLEPKLDTYKSLVASFGKQQLVEQAEELFEELQSKGCKLDRSFY 1061
Query: 300 LDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
++ SG + + + MM AG+EP+ T LM Y
Sbjct: 1062 HTMMKIYRNSGSHSKAERLFS---------------MMKDAGVEPTIATMHLLMVSYGSS 1106
Query: 360 GDMDSIRRLLA---QNGSSLVNGDYLDIIHALAVSG 392
G ++L+ + GS+L Y +I A +G
Sbjct: 1107 GQPQEAEKVLSNLKETGSNLSTLPYSSVIDAYLRNG 1142
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 116/291 (39%), Gaps = 38/291 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ + N +LR+ D + + + GI+P VTY L+ + YC+ G ++
Sbjct: 198 DVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDS------YCKGGKVQ 251
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+L M+ + ++ +N LI G S+ + A+G++ M + GL+ SA TY L+
Sbjct: 252 QGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLI 311
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
GY G + + + P + F + L L M+ A L+ M
Sbjct: 312 YGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKL-----GRMSDAMQQLSDML 366
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS-----SLVNGDYLDIIHALAVSGH 311
L P +Y L+ GY + G++ L + S ++V Y ++ L G
Sbjct: 367 ANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT--YNTLLDGLCRQGE 424
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
E ++ M G+ P TYT L+ G K G +
Sbjct: 425 LEVAQQLKV---------------EMINEGIAPDIVTYTILVNGSCKMGSL 460
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 157/395 (39%), Gaps = 54/395 (13%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
GE + I YN LL Y D L++++ +G PN VTY LI+ +SK
Sbjct: 226 GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLING---LSK- 281
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
G E A ++ M +S +N LIYG+ +A A + M G P+
Sbjct: 282 --KGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTV 339
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY + G K G M ++ + + L S+ ++ A +
Sbjct: 340 ATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 399
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSSLVNGDYLDII 303
+ L P+ TY L+ G + G+++ ++L + + + LVNG
Sbjct: 400 LRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS----C 455
Query: 304 HALAVSGHGEYIDEV-------------SAIVCFVNI-----CFHWLEGPMMSQAGLEPS 345
++S E+ DE+ + IV + + F L+ M+++ G P
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFS-LQEEMLAK-GFPPD 513
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL---DIIHALAVSGH----GEYID 398
Y ++ G K G+++ LL + S V DY+ IIHA +G E
Sbjct: 514 LIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFY 573
Query: 399 EIISK-IQPG-VGYSADAANHIYHLINKGQIDAAY 431
E++SK + P V Y+ H KG+++ A+
Sbjct: 574 EMLSKGLTPSVVTYTVLIHGH----AGKGRLERAF 604
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 92/210 (43%), Gaps = 12/210 (5%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P D+ YN ++ + ++ L K+ S G+ P+ VTY + +I + ++G
Sbjct: 511 PPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY------TSIIHAHLENGR 564
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ +I M K S + LI+GH+ + A + M + G+ P+ TY
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA- 258
L+ G K MD + + +S+ +LI + +M + + L++ Q
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSY---TILINENCNMGNWQEALSLYKQML 681
Query: 259 --GLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
G++P + T++ L+ K + +VR+L
Sbjct: 682 DRGVQPDSCTHSALLKQLGKDCKLQAVRQL 711
>gi|414888269|tpg|DAA64283.1| TPA: hypothetical protein ZEAMMB73_921256 [Zea mays]
Length = 616
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 125/326 (38%), Gaps = 42/326 (12%)
Query: 73 HTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLIS 132
H V D++ YN LL L + G+ P+ V+Y+ ++
Sbjct: 241 HDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVD------ 294
Query: 133 KYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEP 192
+ GN+ A ++ M + L+ H++ A A +L M G P
Sbjct: 295 AFASAGNLSRAAELFSEMAATGHTADASAYLGLMEAHTRVGATADAVAVLRQMQADGCAP 354
Query: 193 SAQTYTKLMCGYAKHGDMDSIKTKIPSLK----PQSELFLCFSFQLTNLLILVSSDMASA 248
+A TY L+ Y + G D ++ ++ P + + N+L V D
Sbjct: 355 TAATYRVLLDLYGRQGRFDGVRQLFREMRTAVPPDTATY--------NVLFRVFGDGGFF 406
Query: 249 EGILTM---MSQAGLEPSAQTYTKLM--CGYAK-HGDMDSVRRLLAQSGSSLVNGDYLDI 302
+ ++ + M + G++P T +M CG+ HGD V + + G Y +
Sbjct: 407 KEVVELFHDMLKTGVQPDMVTCENVMAACGHGGLHGDAREVLEYMTREGMVPTADAYTGL 466
Query: 303 IHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG-- 360
+ AL GH +E A V F MM++ G P+ +TY L YA+ G
Sbjct: 467 VEAL---GHAAMYEE--AYVAF----------NMMTEIGSLPTLETYNALAFAYARGGLF 511
Query: 361 -DMDSIRRLLAQNGSSLVNGDYLDII 385
+ ++I ++ N + D D +
Sbjct: 512 QEAEAIFSRMSNNAGIQKSKDSFDAL 537
Score = 43.9 bits (102), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 99/250 (39%), Gaps = 26/250 (10%)
Query: 162 FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGD----MDSIKTKI 217
+ +LI +++ A +L M G+ P+A TY ++ A+ D D +
Sbjct: 177 YTSLIAAYARNALHEEARALLDQMKATGVAPTAATYNTVLAACARATDPPVPFDMLLGLF 236
Query: 218 PSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
++ + + N L+ V S +E +L M +AG+ P +Y ++ +
Sbjct: 237 AEMRHDASPSVRPDLTTYNTLLAAAAVRSLADQSEMLLHTMLEAGVSPDTVSYRHIVDAF 296
Query: 275 AKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHW 331
A G++ L +A +G + YL ++ A + G D V+ +
Sbjct: 297 ASAGNLSRAAELFSEMAATGHTADASAYLGLMEAH--TRVGATADAVAVL---------- 344
Query: 332 LEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVS 391
M G P+A TY L+ Y + G D +R+L + ++ V D V
Sbjct: 345 ---RQMQADGCAPTAATYRVLLDLYGRQGRFDGVRQLFREMRTA-VPPDTATYNVLFRVF 400
Query: 392 GHGEYIDEII 401
G G + E++
Sbjct: 401 GDGGFFKEVV 410
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 91/209 (43%), Gaps = 9/209 (4%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+L+ + + + S+G PN VTY LI+ +C+ +E K
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLING------FCKSRRVEDGMK 332
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + +N LI+G+ Q + A+ I + M G+ P T+ L+ G
Sbjct: 333 LFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLC 392
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+G++ S K ++ + ++ + + + + A + + G++P A+
Sbjct: 393 VNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDAR 452
Query: 266 TYTKLMCGYAKHG---DMDSVRRLLAQSG 291
TYT ++ G K+G + D + R + + G
Sbjct: 453 TYTIMILGLCKNGPRREADELFRRMKEDG 481
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 127/300 (42%), Gaps = 31/300 (10%)
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
L S + LI +C+ + A IL M + S F +L++G N + A +
Sbjct: 98 HDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSL 157
Query: 182 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSEL---FLCFSFQLTNLL 238
+ M ++G EP+ Y L+ K+GD++ + ++ + L + ++ LT L
Sbjct: 158 VASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGL- 216
Query: 239 ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD 298
S + A IL M++ + P T+T L+ + K G++D + L Q S + +
Sbjct: 217 -CYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN 275
Query: 299 ---YLDIIHALAVSGH----GEYIDEVSAIVCFVNICFH-----------WLEGPM---- 336
Y +I+ L + G + D +++ CF N+ + +E M
Sbjct: 276 TVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQ 335
Query: 337 -MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLD---IIHALAVSG 392
M + GL TY L+ GY + G + + + + S V D + ++H L V+G
Sbjct: 336 RMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNG 395
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 126/319 (39%), Gaps = 41/319 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQG-IEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
YN L+ N + L ++E +G + + VTY L++ C G A
Sbjct: 173 YNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG------LCYSGEWRQAA 226
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
+IL M + F ALI + ++ A+ + M Q+ + P+ TY L+ G
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NLLI---LVSSDMASAEGILTMMSQAGL 260
HG + K + + CF +T N LI S + + M + GL
Sbjct: 287 CMHGRLYHAKKTFDLMASKG----CFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGH------ 311
TY L+ GY + G + + + + S V D + ++H L V+G
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMV 402
Query: 312 -------GE-YIDEVSAIVCFVNICF------HWLEGPMMSQAGLEPSAQTYTKLMCGYA 357
GE Y+ V+ + +C W + G++P A+TYT ++ G
Sbjct: 403 KFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLC 462
Query: 358 KHG---DMDSIRRLLAQNG 373
K+G + D + R + ++G
Sbjct: 463 KNGPRREADELFRRMKEDG 481
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 115/291 (39%), Gaps = 35/291 (12%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG 142
I + +LL + +A + G EPN V Y LI C++G++
Sbjct: 135 IVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDC------LCKNGDVNI 188
Query: 143 ATKILEFMRDKTFPISEGV-FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M K ++ V +N L+ G + + A IL M++ + P T+T L+
Sbjct: 189 ALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALI 248
Query: 202 CGYAKHGDMDSIKTKIP-----SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
+ K G++D + S+ P + + L N L + + A+ +M+
Sbjct: 249 DAFVKQGNLDEAQELYKQMLQSSIGPNTVTY----NSLINGLCM-HGRLYHAKKTFDLMA 303
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGE 313
G P+ TY L+ G+ K ++ +L + + GD Y +IH G
Sbjct: 304 SKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLR 363
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
++ F W M G+ P T+ L+ G +G++ S
Sbjct: 364 VAKDI----------FSW-----MVSCGVTPDIITHCILLHGLCVNGEIGS 399
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 14/219 (6%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
EL + ++ YN ++ N + + +E +GI + VTY LIS
Sbjct: 712 AELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISG------L 765
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
C G A ++L M + + F ALI + ++ A+ + M + + P+
Sbjct: 766 CNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNI 825
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NLLI---LVSSDMASAEG 250
TY L+ G+ G + K + + CF +T N LI S +
Sbjct: 826 LTYNSLINGFCIQGRLGDAKHMFDLMVSKG----CFPDVVTYNTLITGFCKSKRVEDGMK 881
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ M+ GL A TY L+ GY + G ++ +++ +
Sbjct: 882 LFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 920
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/342 (19%), Positives = 134/342 (39%), Gaps = 31/342 (9%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
K+E+ GI L S + LI +C+ A +L M F S +L+
Sbjct: 640 KMENLGIS------HDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLN 693
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
G Q N A ++ M++ GLEP+ Y ++ G K+ D+++ ++ + +
Sbjct: 694 GFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVA 753
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
++ + S A +L M + ++P+ +T L+ + K G++ + L
Sbjct: 754 DAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLY 813
Query: 288 AQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEP 344
+ V+ + Y +I+ + G + H + +M G P
Sbjct: 814 KEMIRRSVHPNILTYNSLINGFCIQGR-------------LGDAKHMFD--LMVSKGCFP 858
Query: 345 SAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEII 401
TY L+ G+ K ++ +L + + GD Y +IH +G ++
Sbjct: 859 DVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 918
Query: 402 SKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARS 440
+++ G D + + L N G+I+ A +V L ++
Sbjct: 919 NRMVD-CGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKN 959
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/197 (18%), Positives = 79/197 (40%), Gaps = 6/197 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN+L+ + + S+G P+ VTY LI+ +C+ +E
Sbjct: 824 NILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITG------FCKSKRVE 877
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
K+ M + +N LI+G+ QA + A+ + M G+ P TY L+
Sbjct: 878 DGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILL 937
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
+G ++ + L+ ++ + + + + A + +++ G++
Sbjct: 938 DCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVK 997
Query: 262 PSAQTYTKLMCGYAKHG 278
A Y ++ G ++G
Sbjct: 998 LDAIAYITMISGLCRNG 1014
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 120/329 (36%), Gaps = 78/329 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y AL+ YL + D ++ G PN VTY L+ C+ GNI A +
Sbjct: 361 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG------LCKAGNISKAFE 414
Query: 146 ILEFM--------RDKTFPISEG--------VFNALIYGHSQANDMASAEGILTMMSQAG 189
+ + D FP + + AL+ G +A+ + A +L M +G
Sbjct: 415 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 474
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
EP+ Y L+ G+ K G +D SA+
Sbjct: 475 CEPNHIVYDALIDGFCKAGKID-----------------------------------SAQ 499
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
+ M++ G PS TYT L+ K G +D ++L+Q + Y +I L
Sbjct: 500 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 559
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G E ++ + +M + G P+ TYT L+ G K G +D
Sbjct: 560 CRIGESEKALKLLS---------------LMEEKGCSPNVVTYTALIDGLGKAGKIDLSL 604
Query: 367 RLLAQNGSSLVNGDYLD---IIHALAVSG 392
L Q + +Y+ +I+ L +G
Sbjct: 605 DLFTQMSRKGCSPNYVTYRVLINHLCAAG 633
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 134/335 (40%), Gaps = 44/335 (13%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G+ P+ TY + LI +C+ G IE A + E MR + + ALI+ + +A
Sbjct: 318 GVTPDVYTY------TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKA 371
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+ A I M AG P+ TY L+ G K G++ +F
Sbjct: 372 KQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK------------------AF 413
Query: 233 QLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS 292
++ LI +SD A ++ + L P+ TY L+ G K +D LL S
Sbjct: 414 EVYAKLI-GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472
Query: 293 SLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKL 352
S ++ I++ + G + SA F+ M++ G PS TYT L
Sbjct: 473 SGCEPNH--IVYDALIDGFCKAGKIDSAQEVFLQ----------MTKCGYLPSVHTYTSL 520
Query: 353 MCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQPGVG 409
+ K G +D ++L+Q + Y +I L G E +++S ++ G
Sbjct: 521 IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK-G 579
Query: 410 YSADAANH---IYHLINKGQIDAAYRIVNTLARSA 441
S + + I L G+ID + + ++R
Sbjct: 580 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 95/240 (39%), Gaps = 28/240 (11%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L+++ PN VTY + +I C+ G E A K+L M +K + + AL
Sbjct: 537 LSQMLKDSCTPNVVTY------TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 590
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I G +A + + + T MS+ G P+ TY L+ G +D + + +K +
Sbjct: 591 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK---Q 647
Query: 226 LFLCFSFQLTNLLIL-VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ Q I S ++ GIL M G P A Y L+ ++K G ++
Sbjct: 648 TYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAM 707
Query: 285 RLLAQ-----SGSSLVNGDYLDIIHALAVSGHGE-------------YIDEVSAIVCFVN 326
L + S N Y +I AL ++ E ++ E+S VC +
Sbjct: 708 ELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIK 767
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 9/213 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN LLR +L+ +A++ S+G EPN+VTY S LIS C+ G I+
Sbjct: 276 DVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTY------SILISSLCRFGRID 329
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +L+ M +K ++ LI + + A GI+ M G P Y ++
Sbjct: 330 EAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTIL 389
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
K+G+ + L+ S+ + D + A G++ M G++
Sbjct: 390 AALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVD 449
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLL---AQSG 291
P TY L+ + G ++ LL QSG
Sbjct: 450 PDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 482
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 141/353 (39%), Gaps = 54/353 (15%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
FL L ++G P+ +I +KLI + NIE A++++E + T P +NA
Sbjct: 90 FLECLVNKGYTPD------VILCTKLIKGFFNFKNIEKASRVMEILESHTEP-DVFAYNA 142
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSIKTKIPSLK 221
+I G + N + +A +L M G P TY + +C K G +LK
Sbjct: 143 VISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG---------LALK 193
Query: 222 PQSELFL--CFSFQLTNLLI----LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
+L L C +T ++ +V + A +L M GL P TY ++ G
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 253
Query: 276 KHGDMDSVRRLLAQSGSSLVNGDYLDI-IHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
K G ++ L+ S D + I A G++ DE +V
Sbjct: 254 KEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKW-DEGEKLV-----------A 301
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SIRRLLAQNGSSLVNGDYLDIIHALAVS 391
M S+ G EP+ TY+ L+ + G +D S+ +++ + + Y +I AL
Sbjct: 302 EMFSR-GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKE 360
Query: 392 GHGEY----IDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
G + +D +IS G D N+ + L G + A I N L
Sbjct: 361 GRLDLAIGIMDYMISN-----GCLPDIVNYNTILAALCKNGNANQALEIFNKL 408
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 128/336 (38%), Gaps = 62/336 (18%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISN-------------- 127
D+ YNA++ + + T L +++++G P+ VTY +I +
Sbjct: 136 DVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVL 195
Query: 128 ---------------SKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
+ LI +G I A K+LE M + +NA+I G +
Sbjct: 196 DQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKE 255
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+ A ++T ++ G +P +Y L+ + G D + + + + C
Sbjct: 256 GMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG----CEPN 311
Query: 233 QLTNLLILVSS-----DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMD---SVR 284
++T IL+SS + A +L +M + L P +Y L+ K G +D +
Sbjct: 312 KVT-YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 370
Query: 285 RLLAQSGSSLVNGDYLDIIHALAVSGHG----EYIDEVSAIVCFVNICFH-------WLE 333
+ +G +Y I+ AL +G+ E +++ + C N+ + W
Sbjct: 371 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSC 430
Query: 334 G---------PMMSQAGLEPSAQTYTKLMCGYAKHG 360
G P M G++P TY L+ + G
Sbjct: 431 GDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDG 466
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Query: 77 LDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQ 136
+ P ++S YN ++ + + S+G++P+ +TY LIS C+
Sbjct: 411 MGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISC------LCR 464
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
DG +E A +L+ M F + +N ++ G + + A G+ M + G P+ T
Sbjct: 465 DGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETT 524
Query: 197 YTKLMCGYAKHG 208
Y L+ G G
Sbjct: 525 YILLIEGIGFAG 536
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 6/130 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI +YN +L N + + KL G PN +Y +IS G+
Sbjct: 381 DIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMIS------ALWSCGDRS 434
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++ M K E +N+LI + + A G+L M Q+G P+ +Y ++
Sbjct: 435 RALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 494
Query: 202 CGYAKHGDMD 211
G K +D
Sbjct: 495 LGLCKVRRID 504
>gi|18407365|ref|NP_564786.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806489|sp|Q8LE47.2|PPR87_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g61870, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 336; Flags: Precursor
gi|16226403|gb|AAL16159.1|AF428391_1 At1g61870/F8K4_8 [Arabidopsis thaliana]
gi|3367521|gb|AAC28506.1| Similar to gb|U08285 membrane-associated salt-inducible protein
from Nicotiana tabacum. ESTs gb|T44131 and gb|T04378
come from this gene [Arabidopsis thaliana]
gi|17065564|gb|AAL32936.1| Unknown protein [Arabidopsis thaliana]
gi|32815835|gb|AAP88326.1| At1g61870 [Arabidopsis thaliana]
gi|332195777|gb|AEE33898.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 408
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 92/213 (43%), Gaps = 16/213 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN +++V+ ++ S +A++E +GI+PN ++ +IS Y +D + E
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGF-----YAEDKSDE 240
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
K+L M+D+ I +N I + A+ +L M AG++P+ TY+ L+
Sbjct: 241 -VGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLI 299
Query: 202 CGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
G+ D + K + KP SE + + L D +A +
Sbjct: 300 HGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCK-----GGDFETALSLCKESM 354
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ PS L+ G AK ++ + L+ Q
Sbjct: 355 EKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQ 387
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V + +S YN ++ + + L + S G++PN VTY S LI +C +
Sbjct: 253 VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTY------SHLIHGFCNED 306
Query: 139 NIEGATKILEFMRDK-TFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+ E A K+ + M ++ P SE F LIY + D +A + + PS
Sbjct: 307 DFEEAKKLFKIMVNRGCKPDSECYFT-LIYYLCKGGDFETALSLCKESMEKNWVPSFSIM 365
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQ 223
L+ G AK ++ K I +K +
Sbjct: 366 KSLVNGLAKDSKVEEAKELIGQVKEK 391
>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
Length = 597
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 114/290 (39%), Gaps = 22/290 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y ++ VY S +++S G +PN TY + L++ + ++G E A +
Sbjct: 280 YXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTY------TALVNAFAREGLCEKAEE 333
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M+ +NAL+ +S+A A I ++M G EP +Y L+ +
Sbjct: 334 VFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFG 393
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ G + LK Q S L S ++A E ++ + ++GL P
Sbjct: 394 RAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTF 453
Query: 266 TYTKLMCGYAKHGDMDSVRRLLA--QSGSSLVNGDYLDIIHALAVSGHGE--YIDEVSAI 321
++ Y + G +D + RL A + G G + + V+ +G Y+D + A
Sbjct: 454 ALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAA 513
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
++ GL T+T + YA+ + R+ +
Sbjct: 514 F------------RSLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEE 551
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 137/346 (39%), Gaps = 41/346 (11%)
Query: 82 DISHYNALLRVYLDNEH-TFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
DI YN L+ Y + + ++A LE++ + P TY + L+ YC G +
Sbjct: 171 DIICYNLLIDAYGQKRQLSEAEAAYMALLEARCV-PTEDTY------ALLLRAYCGSGQL 223
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A ++ M+ P + V+NA + G +A A + M + + ZTY +
Sbjct: 224 HRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZTYXLM 283
Query: 201 MCGYAKHGD-MDSIKT----KIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
+ Y K M S++ K KP +C L N AE + M
Sbjct: 284 INVYGKANQPMSSLRVFREMKSVGCKPN----ICTYTALVNAFAR-EGLCEKAEEVFEEM 338
Query: 256 SQAGLEPSAQTYTKLMCGYAKHG---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG-H 311
QAG EP Y LM Y++ G + L+ G Y ++ A +G H
Sbjct: 339 QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLH 398
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
E F L+ Q G+ P+ +++ L+ +A+ G++ ++AQ
Sbjct: 399 QE-----------AEAAFQELK-----QQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQ 442
Query: 372 NGSSLVNGDYLDI---IHALAVSGHGEYIDEIISKIQPGVGYSADA 414
S + D + ++A +G + ++ + + ++ G G SA A
Sbjct: 443 LHKSGLRPDTFALNAMLNAYGRAGRLDDMERLFAAMERGDGASAGA 488
>gi|224128023|ref|XP_002329235.1| predicted protein [Populus trichocarpa]
gi|222871016|gb|EEF08147.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 117/286 (40%), Gaps = 36/286 (12%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+L+ + + L ++ S I P+ VT+ + L+ +C++G + A
Sbjct: 186 YNSLIHGLCNCSQWKEASAILNEMTSLNIMPDIVTF------NVLVDTFCKEGKVSEAQG 239
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L+ M + + + +N+L+YGHS ++ A + M G +P+ +Y L+ GY
Sbjct: 240 VLKTMTEMSVELDVVTYNSLMYGHSLWMEVVEARKLFGFMITKGCKPNVFSYNILINGYC 299
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K +D K + Q S+ L + A+ + M G P
Sbjct: 300 KAEMIDEAKQLFNEMIHQGLTPNIVSYNTHGFCQL--GKLREAQELNENMHTNGNLPDLC 357
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFV 325
TY+ L+ G+ K G+ + R+L ++ L V G +DE A+ F
Sbjct: 358 TYSILLDGFCKQGNHIAARKLFSE----------------LFVQGLQRLLDE--ALETFR 399
Query: 326 NICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M + G P+ +Y ++ G+ +H D +L+ +
Sbjct: 400 K----------MEEDGCPPNEWSYNVIIRGFLRHRDESRAVQLIGE 435
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 114/289 (39%), Gaps = 35/289 (12%)
Query: 87 NALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKI 146
N L+ + +H LAK+ G++P+ V + + LI+ C+ G A ++
Sbjct: 124 NILINCFCKLQHVDLGFSVLAKVIKLGLQPDVVPF------TTLINGLCKVGKFSQAVEL 177
Query: 147 LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAK 206
D+T E +N+LI+G + A IL M+ + P T+ L+ + K
Sbjct: 178 F----DETV---ERGYNSLIHGLCNCSQWKEASAILNEMTSLNIMPDIVTFNVLVDTFCK 230
Query: 207 HGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS---DMASAEGILTMMSQAGLEPS 263
G + + LK +E+ + N L+ S ++ A + M G +P+
Sbjct: 231 EGKVSEAQG---VLKTMTEMSVELDVVTYNSLMYGHSLWMEVVEARKLFGFMITKGCKPN 287
Query: 264 AQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI-IHALAVSGHGEYIDEVSAIV 322
+Y L+ GY K +D ++L + + + + H G E++
Sbjct: 288 VFSYNILINGYCKAEMIDEAKQLFNEMIHQGLTPNIVSYNTHGFCQLGKLREAQELNE-- 345
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
M G P TY+ L+ G+ K G+ + R+L ++
Sbjct: 346 -------------NMHTNGNLPDLCTYSILLDGFCKQGNHIAARKLFSE 381
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 116/291 (39%), Gaps = 38/291 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ + N +LR+ D + + + GI+P VTY L+ + YC+ G ++
Sbjct: 198 DVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDS------YCKGGKVQ 251
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+L M+ + ++ +N LI G S+ + A+G++ M + GL+ SA TY L+
Sbjct: 252 QGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLI 311
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
GY G + + + P + F + L L M+ A L+ M
Sbjct: 312 YGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKL-----GRMSDAMQQLSDML 366
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS-----SLVNGDYLDIIHALAVSGH 311
L P +Y L+ GY + G++ L + S ++V Y ++ L G
Sbjct: 367 ANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT--YNTLLDGLCRQGE 424
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
E ++ M G+ P TYT L+ G K G +
Sbjct: 425 LEVAQQLKV---------------EMINEGIAPDIVTYTILVNGSCKMGSL 460
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 157/395 (39%), Gaps = 54/395 (13%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
GE + I YN LL Y D L++++ +G PN VTY LI+ +SK
Sbjct: 226 GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLING---LSK- 281
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
G E A ++ M +S +N LIYG+ +A A + M G P+
Sbjct: 282 --KGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTV 339
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY + G K G M ++ + + L S+ ++ A +
Sbjct: 340 ATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 399
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ-----------SGSSLVNGDYLDII 303
+ L P+ TY L+ G + G+++ ++L + + + LVNG
Sbjct: 400 LRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGS----C 455
Query: 304 HALAVSGHGEYIDEV-------------SAIVCFVNI-----CFHWLEGPMMSQAGLEPS 345
++S E+ DE+ + IV + + F L+ M+++ G P
Sbjct: 456 KMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFS-LQEEMLAK-GFPPD 513
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYL---DIIHALAVSGH----GEYID 398
Y ++ G K G+++ LL + S V DY+ IIHA +G E
Sbjct: 514 LIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFY 573
Query: 399 EIISK-IQPG-VGYSADAANHIYHLINKGQIDAAY 431
E++SK + P V Y+ H KG+++ A+
Sbjct: 574 EMLSKGLTPSVVTYTVLIHGH----AGKGRLERAF 604
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 89/207 (42%), Gaps = 12/207 (5%)
Query: 80 PLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN 139
P D+ YN ++ + ++ L K+ S G+ P+ VTY + +I + ++G
Sbjct: 511 PPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY------TSIIHAHLENGR 564
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ +I M K S + LI+GH+ + A + M + G+ P+ TY
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA- 258
L+ G K MD + + +S+ +LI + +M + + L++ Q
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSY---TILINENCNMGNWQEALSLYKQML 681
Query: 259 --GLEPSAQTYTKLMCGYAKHGDMDSV 283
G++P + T++ L+ K + +V
Sbjct: 682 DRGVQPDSCTHSALLKQLGKDCKLQAV 708
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 120/296 (40%), Gaps = 31/296 (10%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
F K+E GI L S + LI +C+ + A +L M + S F +
Sbjct: 93 FSQKMELYGIS------HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGS 146
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ- 223
L++G N + A ++ +M ++G EP+ Y L+ G K+G+++ + ++ +
Sbjct: 147 LLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG 206
Query: 224 -SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 282
+ ++ LT L S + A +L M + + P T+T L+ + K G++D
Sbjct: 207 LGADVVTYNTLLTGL--CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDE 264
Query: 283 VRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+ L + QS N Y II+ L + HG D +M+
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCM--HGRLYDAKKTF-------------DLMAS 309
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSG 392
G P+ TY L+ G+ K +D +L + N D Y +IH G
Sbjct: 310 KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 16/204 (7%)
Query: 91 RVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFM 150
R+Y D + TF D +A S+G PN VTY LIS +C+ ++ K+ + M
Sbjct: 296 RLY-DAKKTF---DLMA---SKGCFPNVVTYNTLISG------FCKFRMVDEGMKLFQRM 342
Query: 151 RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDM 210
+ F +N LI+G+ Q + A I M + P T+ L+ G +G++
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 211 DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKL 270
+S K ++ + ++ + + + + A + + G++P A+TYT +
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Query: 271 MCGYAKHG---DMDSVRRLLAQSG 291
+ G K+G + D + R + + G
Sbjct: 463 ILGLCKNGPRREADELIRRMKEEG 486
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 125/327 (38%), Gaps = 58/327 (17%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ N + L ++E +G+ + VTY L++ C G A +
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG------LCYSGRWSDAAR 232
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+L M ++ F ALI + ++ A+ + M Q+ ++P+ TY ++ G
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NLLI-------LVSSDMASAEGILTMMSQ 257
HG + K + + CF +T N LI +V M + MS
Sbjct: 293 MHGRLYDAKKTFDLMASKG----CFPNVVTYNTLISGFCKFRMVDEGMK----LFQRMSC 344
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD---IIHALAVSGHGEY 314
G TY L+ GY + G + + S V D + ++H L V+G E
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE- 403
Query: 315 IDEVSAIVCF--------------VNICFH-----------WLEGPMMSQAGLEPSAQTY 349
SA+V F NI H W + G++P A+TY
Sbjct: 404 ----SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Query: 350 TKLMCGYAKHG---DMDSIRRLLAQNG 373
T ++ G K+G + D + R + + G
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEG 486
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN L+ Y D + S+ + P+ +I++ L+ C +G IE
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD------IITHCILLHGLCVNGEIE 403
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A + MR+ I +N +I+G +A+ + A + + G++P A+TYT ++
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 202 CGYAKHG 208
G K+G
Sbjct: 464 LGLCKNG 470
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 89/423 (21%), Positives = 157/423 (37%), Gaps = 49/423 (11%)
Query: 81 LDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
+DI Y ++ N+ + K+ + G P TY L++ C+ G +
Sbjct: 32 IDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNG------LCKMGRL 85
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A +L + D + +LI G + A + M+ GL YT L
Sbjct: 86 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTAL 145
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGL 260
+ G + G + + ++ Q + + + + + +A I M GL
Sbjct: 146 IRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGL 205
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDE 317
P+ Y+ L+ G K MD +LAQ + D Y +I L SG +
Sbjct: 206 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSG------D 259
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
V+A F + M +AG +P TY L+ G+ K G+ D+ + SS
Sbjct: 260 VAAARAFFD---------EMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC 310
Query: 378 NGDYLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLINKGQIDAAY---RIV 434
+ + V +G I + + Q A+ + H+ +G ++ +V
Sbjct: 311 SPN---------VVTYGTLISGLCKRRQL-----TKASLYYQHMKERGCPPDSFVYSSLV 356
Query: 435 NTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKGQIDAAYRIVNT 494
+ L +S + G G L M + GV S I+HL ++D A + N
Sbjct: 357 DGLCKSGKLEG-----GCMLFDEM---ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNA 408
Query: 495 LAR 497
+ +
Sbjct: 409 IRK 411
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 120/286 (41%), Gaps = 31/286 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGN-I 140
D+ YN L+ +Y + ++E G+ P+ VTY LI +C++ N +
Sbjct: 256 DLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYG------FCREVNDL 309
Query: 141 EGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
E A ++ E M + +N+++ + + A +L MS+ +EP T L
Sbjct: 310 EEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTL 369
Query: 201 MCGYAKHGDMDS---IKTKI--PSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMM 255
+ Y K GDM S +K K+ LKP F+F+ ++ SA+ L M
Sbjct: 370 INAYCKIGDMGSAMKVKKKMLEAGLKPDQ-----FTFKALIHGFCKLHEVDSAKEFLFEM 424
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYI 315
AG PS TY+ L+ Y + ++V RL + G ++DI A+ I
Sbjct: 425 LDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSR---KGLFVDISVYRALIRRLCKI 481
Query: 316 DEV-SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHG 360
D++ SA F +M G++ + YT L Y K G
Sbjct: 482 DKIESAERIFT----------LMQGKGMKGDSVVYTSLAYAYFKAG 517
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 24/319 (7%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP +I +N L+ + L ++ES+ I P+ TY + LIS YC+ G
Sbjct: 219 VP-NIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTY------NTLISLYCKKG 271
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHS-QANDMASAEGILTMMSQAGLEPSAQTY 197
A I + M +N+LIYG + ND+ A + +M GL P TY
Sbjct: 272 MHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTY 331
Query: 198 TKL---MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
+ +C K D + + ++ K + + C + L N + DM SA +
Sbjct: 332 NSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNT--LINAYCKI-GDMGSAMKVKKK 388
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGH 311
M +AGL+P T+ L+ G+ K ++DS + L + +G S Y ++ + +
Sbjct: 389 MLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDN 448
Query: 312 GEYI----DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD---MDS 364
E + DE+S FV+I + + + SA+ LM G GD S
Sbjct: 449 KEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTS 508
Query: 365 IRRLLAQNGSSLVNGDYLD 383
+ + G ++ D LD
Sbjct: 509 LAYAYFKAGKAIAASDMLD 527
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/379 (20%), Positives = 139/379 (36%), Gaps = 29/379 (7%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D P D+ Y+ L+ K+ EP+ VT+ + L+ C+
Sbjct: 296 DCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTF------TALMDGLCKG 349
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
++ A ++LE M D+ + +++LI G + + A+ + M G+EP+ TY
Sbjct: 350 DRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTY 409
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
L+ G+ +DS + + L ++ + + A + M
Sbjct: 410 NSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKA 469
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDE 317
P TY+ L+ G+ K +D R L V D + + + +D+
Sbjct: 470 KFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDD 529
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL---AQNGS 374
++ M + P TYT L+ G+ K G M RR+L A+ G
Sbjct: 530 AERLL------------EEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGC 577
Query: 375 SLVNGDYLDIIHALAVSGHG----EYIDEIISK-IQPGVGYSADAANHIYHLINKGQIDA 429
Y +I A +G ++E++ +QP V + I G ++
Sbjct: 578 QPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNV---ITYRSLIGGFCGTGDLEE 634
Query: 430 AYRIVNTLARSANINGEQL 448
A +I+ L R N +
Sbjct: 635 ARKILERLERDENCKADMF 653
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 118/298 (39%), Gaps = 36/298 (12%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D + YN ++ +T D+ +E + + +I+ + +I C+
Sbjct: 91 VP-DAAIYNFVIHALCKARNTAKALDYFRSMECE---------KNVITWTIMIDGLCKAN 140
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ AT M+ K +E +N LI G + + + A +L M ++GL P+ TY+
Sbjct: 141 RLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYS 200
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
++ G+ + +D+ + + ++ + + M A +L M +
Sbjct: 201 TVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRER 260
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD-------YLDIIHALAVSGH 311
GL+P +Y LM G K G +D ++ + NGD Y +I L +G
Sbjct: 261 GLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS----NGDCPPDVVAYSTLIAGLCKAGR 316
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+DE + M + EP T+T LM G K + +++L
Sbjct: 317 ---LDEACKLF------------EKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 359
Score = 62.0 bits (149), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 134/335 (40%), Gaps = 40/335 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YN L L L GI PN TY + +I C+ G+++
Sbjct: 23 NVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTY------AVVIQGLCKSGDLD 76
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++LE MR+ ++N +I+ +A + A A L E + T+T ++
Sbjct: 77 KACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKA---LDYFRSMECEKNVITWTIMI 133
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ-LTNLLILVSSDMASAEGILTMMSQAGL 260
G K + T +K + + +++ L N V + A +L M ++GL
Sbjct: 134 DGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHK-VHRAYLLLKEMKESGL 192
Query: 261 EPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHGEYIDE 317
P+ TY+ ++ G+ + +D+ +L Q +G Y ++ L +G +DE
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG---LMDE 249
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLV 377
++ M + GL+P +Y LM G K G +D ++ N
Sbjct: 250 AYELL------------DEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS---- 293
Query: 378 NGD-------YLDIIHALAVSGHGEYIDEIISKIQ 405
NGD Y +I L +G + ++ K++
Sbjct: 294 NGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMR 328
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y AL+ + L ++ G++PN +TY+ LI +C G++E
Sbjct: 580 NVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGG------FCGTGDLE 633
Query: 142 GATKILEFM-RDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A KILE + RD+ + ++ G + M++A +L + Q+G P Y L
Sbjct: 634 EARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVAL 693
Query: 201 MCGYAKHGDM 210
+ G + ++
Sbjct: 694 IRGLCQGKEL 703
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 121/293 (41%), Gaps = 35/293 (11%)
Query: 113 GIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQA 172
G P+ VTY L++ C++ + A +L MR++ P F LI+G+
Sbjct: 300 GCLPDVVTYNTLLNG------LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIE 353
Query: 173 NDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSF 232
+ A + M L P TY L+ G + GD+D + + F
Sbjct: 354 GKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE----IFPN 409
Query: 233 QLTNLLILVS----SDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
+T +++ S + A G L M G+ P+ TY ++ GY + G++ ++ L
Sbjct: 410 HVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQ 469
Query: 289 QSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ + V+ D Y +IH YI E ++ F L MM + ++P
Sbjct: 470 KMMVNKVSPDLITYNTLIHG--------YIKEDK-----MHDAFKLLN--MMEKEKVQPD 514
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGE 395
TY L+ G++ HG++ + + + + D Y+ +I+ +G+ +
Sbjct: 515 VVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSK 567
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 102/247 (41%), Gaps = 21/247 (8%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E VP D+ + L+ Y + +Q + P+ VTY LI C
Sbjct: 333 ERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG------MC 386
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ G+++ A + + M + + ++ LI H + + A G L M G+ P+
Sbjct: 387 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 446
Query: 196 TYTKLMCGYAKHGDMDSIKTKIPSL---KPQSELFLCFSFQLTNLLI---LVSSDMASAE 249
TY ++ GY + G++ + + + K +L N LI + M A
Sbjct: 447 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI------TYNTLIHGYIKEDKMHDAF 500
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
+L MM + ++P TY L+ G++ HG++ + + + + D Y+ +I+
Sbjct: 501 KLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGH 560
Query: 307 AVSGHGE 313
+G+ +
Sbjct: 561 VTAGNSK 567
Score = 41.2 bits (95), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 6/110 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ Y+ + L +E + ++P+ VTY LI+ + GN++
Sbjct: 479 DLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLING------FSVHGNVQ 532
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLE 191
A I E M K + ++I GH A + A + M Q G E
Sbjct: 533 EAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKE 582
>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Brachypodium distachyon]
Length = 864
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 117/526 (22%), Positives = 206/526 (39%), Gaps = 62/526 (11%)
Query: 123 QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGIL 182
L+ + +++ +C++G ++ A ++++ MR + + FN I +A + A I
Sbjct: 204 NLVVCNTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIF 263
Query: 183 TMMSQA---GL-EPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLL 238
M +A GL P T+ ++ G+ G +D + ++ L S+
Sbjct: 264 NDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSG 323
Query: 239 ILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD 298
++ + + A+ +L+ M+ G++P++ TY ++ G K G VRR+ S ++ D
Sbjct: 324 LVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPD 383
Query: 299 ---YLDIIHALAVSGH----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTK 351
Y ++HA G+ +DE M+Q G P+ TY
Sbjct: 384 VVTYTSLLHAYCSKGNTTAANRILDE-------------------MAQKGCAPNLFTYNV 424
Query: 352 LMCGYAKHGDMDSIRRLL---AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKI-QPG 407
L+ K G + RLL ++ G SL II L + E +I+ + G
Sbjct: 425 LLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEG 484
Query: 408 VGYSADAANHIYHLINKGQIDAAY---RIV-NTLARSANINGEQLPVGGFLVRHMVKTNQ 463
N L++ I + RI +TL + G LV + K
Sbjct: 485 RLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDIS 544
Query: 464 P-GVGYSADAANHIYHLINKGQI------DAAYRIVNTLARSANINGEQLPVGGFLVRHM 516
P V Y D H Y + K + D R N RS N L + GF
Sbjct: 545 PDSVIY--DTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYN-----LLIWGF----- 592
Query: 517 VKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKAHVLKEDYTGAVETF-EYCVNQF--R 573
+ Q D++L + + ++ + LIK+ + A+ E N+
Sbjct: 593 -QEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPN 651
Query: 574 ATPWKGELLKRFIQAEDAACLQRITDLSTSIHGEVNSLYDLMLSFL 619
T + G L+K F + D + QR+ D++ S G+ LY LM + L
Sbjct: 652 VTSF-GLLIKAFCKTADFSAAQRVFDVALSTCGQKEVLYCLMCTEL 696
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 160/393 (40%), Gaps = 66/393 (16%)
Query: 112 QGI-EPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
QG+ P++VT+ ++S +C G ++ AT +++ MR F +N + G
Sbjct: 272 QGLPRPDQVTFDVMLSG------FCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLV 325
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---DMDSIKTKIPS--LKPQSE 225
+ + A+ +L+ M+ G++P++ TY ++ G K G D+ ++ + S + P
Sbjct: 326 KNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVV 385
Query: 226 LFLCFSFQLTNLLILVSS--DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ T+LL S + +A IL M+Q G P+ TY L+ K G V
Sbjct: 386 TY-------TSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEV 438
Query: 284 RRLL---AQSGSSLVNGDYLDIIHALAVSGHGEY-IDEVSAIVCFVNICFHWLEGPM--- 336
RLL ++ G SL II L + E +D V + W EG +
Sbjct: 439 ERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGM---------WNEGRLALR 489
Query: 337 --------------MSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD-- 380
+S++ L P TY+ LM K G D ++ L + ++ D
Sbjct: 490 RLGNSFVSLVSDSSISKSCL-PDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSV 548
Query: 381 -YLDIIHALAVSGHGEYIDEIISKIQPGVGYSADAANHIYHLI-----NKGQIDAAYRIV 434
Y IH + G +++ ++ S + + Y+L+ K + D +++
Sbjct: 549 IYDTFIHGYCMHGKTSLAIKVLRDMEK---RSCNPSTRSYNLLIWGFQEKQKSDEILKLM 605
Query: 435 NTLAR---SANINGEQLPVGGFLVRHMVKTNQP 464
+ + S+N+ + F R MV P
Sbjct: 606 SEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMP 638
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/318 (18%), Positives = 119/318 (37%), Gaps = 53/318 (16%)
Query: 83 ISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQ-------------------- 122
+ YN L + N + L+++ +G++PN TY
Sbjct: 314 VESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVED 373
Query: 123 ---------QLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQAN 173
+++ + L+ YC GN A +IL+ M K + +N L+ +A
Sbjct: 374 FVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAG 433
Query: 174 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQ 233
E +L MS+ G + ++ G ++ ++ + + + L L +
Sbjct: 434 RTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLAL---RR 490
Query: 234 LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293
L N + + SD + ++ L P TY+ LM K G D ++ L +
Sbjct: 491 LGNSFVSLVSDSSISKSCL---------PDRITYSTLMNALCKEGRFDEAKKKLVEMIGK 541
Query: 294 LVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLM 353
++ D +I+ + G+ + AI + M + PS ++Y L+
Sbjct: 542 DISPD--SVIYDTFIHGYCMHGKTSLAIKVLRD----------MEKRSCNPSTRSYNLLI 589
Query: 354 CGYAKHGDMDSIRRLLAQ 371
G+ + D I +L+++
Sbjct: 590 WGFQEKQKSDEILKLMSE 607
Score = 47.8 bits (112), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 65/348 (18%), Positives = 126/348 (36%), Gaps = 57/348 (16%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y +LL Y +T + L ++ +G PN TY L+ + + G
Sbjct: 383 DVVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQS------LLKAGRTT 436
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG------------ 189
++LE M +K + + N +I G + + + A I+ M G
Sbjct: 437 EVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFV 496
Query: 190 -----------LEPSAQTYTKLMCGYAKHGDMDSIKTKI-----PSLKPQSELFLCFSFQ 233
P TY+ LM K G D K K+ + P S ++ F
Sbjct: 497 SLVSDSSISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHG 556
Query: 234 LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293
+ + A +L M + PS ++Y L+ G+ + D + +L+++
Sbjct: 557 YC-----MHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEK 611
Query: 294 LVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYT 350
++ + Y +I + G VN L+ M Q + P+ ++
Sbjct: 612 GISSNVMTYNSLIKSFCGRG-------------MVNKAMPLLDE--MLQNEIVPNVTSFG 656
Query: 351 KLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYID 398
L+ + K D + +R+ S+ + L + +S + +I+
Sbjct: 657 LLIKAFCKTADFSAAQRVFDVALSTCGQKEVLYCLMCTELSTYARWIE 704
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 124/315 (39%), Gaps = 35/315 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN L+ + + +L K+ + G+EPN TY +I+ +C+ G ++
Sbjct: 285 DVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIING------FCKAGMMQ 338
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A KIL K F E +++LI G DM A + + G + S Y L+
Sbjct: 339 NADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM---ASAEGILTMMSQA 258
G +K G + + +K E NL++ M + A GIL
Sbjct: 399 KGLSKQG---LVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAK 455
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH-GEY 314
G P T+ L+ GY K +MD +L S + D Y +++ L +
Sbjct: 456 GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNV 515
Query: 315 IDEVSAIV---CFVNICFH------WLEGPMMSQA----------GLEPSAQTYTKLMCG 355
+D A++ C NI + + + +S+A GL P T L+CG
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575
Query: 356 YAKHGDMDSIRRLLA 370
+G++D L
Sbjct: 576 LCSNGELDKAYELFV 590
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 78/198 (39%), Gaps = 52/198 (26%)
Query: 111 SQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHS 170
QGI P+ +T+ +KLI C+ GN++ + K+ + + + FN I G
Sbjct: 209 KQGICPDILTF------NKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLC 262
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCF 230
+ + A +L + GL P +Y L+CG+ KH
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKH----------------------- 299
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
S + AE L M +G+EP+ TY ++ G+ K G M + ++L +
Sbjct: 300 ------------SKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDA 347
Query: 291 G-----------SSLVNG 297
SSL+NG
Sbjct: 348 MFKGFIPDEFTYSSLING 365
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 90/217 (41%), Gaps = 15/217 (6%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI +N L+ Y + + L + S GI P+ +TY L++ C+ ++
Sbjct: 460 DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNG------LCKARKLD 513
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ M +K + +N LI + ++ A + M GL P T L+
Sbjct: 514 NVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLI 573
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS-----DMASAEGILTMMS 256
CG +G++D +++ + + FS+ I++++ +++ AE + M
Sbjct: 574 CGLCSNGELDKAYELFVTIEKEYK----FSYSTAIFNIMINAFCEKLNVSMAEKLFHKMG 629
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSS 293
+ P TY ++ Y K G++D L ++ S
Sbjct: 630 GSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK 666
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 106/293 (36%), Gaps = 23/293 (7%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L++ + + G P+ TY +++ C+ G + A
Sbjct: 394 YNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG------LCKMGCLSDANG 447
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
IL K FN LI G+ + +M A IL M G+ P TY L+ G
Sbjct: 448 ILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLC 507
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEP 262
K +D++ + + K E + N+LI ++ A + M GL P
Sbjct: 508 KARKLDNV---VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564
Query: 263 SAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIV 322
T L+CG +G++D L Y I + ++ E ++ V
Sbjct: 565 DIVTLCTLICGLCSNGELDKAYELFVTIEKEY-KFSYSTAIFNIMINAFCEKLN-----V 618
Query: 323 CFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSS 375
FH + G + P TY ++ Y K G++D L +N S
Sbjct: 619 SMAEKLFHKMGG-----SDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK 666
Score = 50.4 bits (119), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 81/191 (42%), Gaps = 25/191 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I YN L+ + + + +++++G+ P+ VT LI C +G ++
Sbjct: 530 NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTL------CTLICGLCSNGELD 583
Query: 142 GATKI-LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
A ++ + ++ F S +FN +I + +++ AE + M + P TY +
Sbjct: 584 KAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVM 643
Query: 201 MCGYAKHGDMDSIKT---------KIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
+ Y K G++D T +PS ++ C + V+ ++ A I
Sbjct: 644 IDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNC---------LCVTHRLSEAVVI 694
Query: 252 LTMMSQAGLEP 262
+ +M Q G+ P
Sbjct: 695 INLMVQNGIVP 705
Score = 39.7 bits (91), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 110/304 (36%), Gaps = 37/304 (12%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKT-FPISEGVFNALIYGHSQANDMASAEGILTMMSQA 188
+I K G E +L MR + EGV+ ++ + + + A + M
Sbjct: 46 MIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFY 105
Query: 189 GLEPSAQTYTKLM-----CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
EPS Q+Y +M GY ++ K + P ++ + ++
Sbjct: 106 DCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDV-----YTHTIRMKSFCITG 160
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYL--- 300
+A +L M G E +A +Y ++ G+ K L + + D L
Sbjct: 161 RPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFN 220
Query: 301 DIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQA-------------------- 340
+IH L G+ + +++ + V +C + + Q
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE 280
Query: 341 GLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYI 397
GL P +Y L+CG+ KH + L + +S V + Y II+ +G +
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340
Query: 398 DEII 401
D+I+
Sbjct: 341 DKIL 344
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 66.2 bits (160), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 138/348 (39%), Gaps = 42/348 (12%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
+ K G+ PN LI+ S LI+ C+ G+I+ A ++LE M K + + A
Sbjct: 285 YFKKWVQMGLNPN------LINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTA 338
Query: 165 LIYGHSQANDMASA-EGILTMMSQAGLEPSAQTYTKLMCGYAK-----HGDMDSIKTKIP 218
LI G + A L ++ +P+ TYT ++ GY K +M I+ K
Sbjct: 339 LIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQ 398
Query: 219 SLKPQSELFLCFSFQLTNLLI---LVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 275
L P + + C LI + + A ++ +M + G P+ TY ++ G
Sbjct: 399 GLVPNTNTYTC--------LIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLC 450
Query: 276 KHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGP 335
K G +LL + S ++ D + + + +S D A+ F
Sbjct: 451 KKGRFPEAYKLLRRGLKSGLHAD--KVTYTILISEFCRQTDNKQALAIF----------S 498
Query: 336 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQN---GSSLVNGDYLDIIHALAVSG 392
M + GL+P TY L+ + + ++ +L + G Y +I G
Sbjct: 499 RMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDG 558
Query: 393 HGEYIDEIISKIQPGVGYSADAANH---IYHLINKGQIDAAYRIVNTL 437
H + K++ G D+ + I L N+ ++D A ++ T+
Sbjct: 559 HISSAIKFFHKMRD-YGCKPDSITYGALISGLCNESKLDEACQLYETM 605
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 113/288 (39%), Gaps = 34/288 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ Y ++ Y E L +++ QG+ PN TY LI +C+ GN
Sbjct: 368 NVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDG------HCKAGNFG 421
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++++ M + F + +NA+I G + A +L ++GL TYT L+
Sbjct: 422 RAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILI 481
Query: 202 CGYAKHGDMD---SIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
+ + D +I +++ + Q ++ N+LI E + +A
Sbjct: 482 SEFCRQTDNKQALAIFSRMFKVGLQPDM------HTYNVLIATFCRQKKVEESEKLFEEA 535
Query: 259 ---GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG--HGE 313
GL P+ +TYT ++CGY + G + S + + D I + +SG +
Sbjct: 536 VGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPD--SITYGALISGLCNES 593
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+DE + M GL P T L Y K GD
Sbjct: 594 KLDEACQLY------------ETMIDNGLSPCEVTRVTLAYEYCKQGD 629
Score = 43.5 bits (101), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 6/123 (4%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +++ Y + H S F K+ G +P+ +TY LIS C + ++ A +
Sbjct: 547 YTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISG------LCNESKLDEACQ 600
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E M D E L Y + + D A+A IL + + + T + +C
Sbjct: 601 LYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNTLIRKLCSEK 660
Query: 206 KHG 208
K G
Sbjct: 661 KVG 663
>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
Length = 484
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 91/226 (40%), Gaps = 44/226 (19%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN+++ Y + FL K+ S G+EP+ VTY + L+ C++G A K
Sbjct: 272 YNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY------NSLMDYLCKNGRCTEARK 325
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M + + L+ G++ + G+L +M + G+ P+ ++ L+C YA
Sbjct: 326 MFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYA 385
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K G +D Q+ L + + M Q GL P
Sbjct: 386 KQGKVD-----------QAML------------------------VFSKMRQQGLNPDTV 410
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQS-GSSLVNGD--YLDIIHALAV 308
TY ++ K G ++ R Q L G+ Y +IH+L +
Sbjct: 411 TYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCI 456
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/339 (20%), Positives = 134/339 (39%), Gaps = 69/339 (20%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQG--IEPNRVTYQQLISNSKLISKYCQDGN 139
++ YN LL+ D + + L + G P+ V+Y + +I+ + ++G+
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSY------TTVINGFFKEGD 214
Query: 140 IEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
++ A M D+ + ++++I +A M A +LT M + G+ P+ +TY
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
++ GY G +P+ A G L M G
Sbjct: 275 IVHGYCSSG------------QPK-----------------------EAIGFLKKMHSDG 299
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEYID 316
+EP TY LM K+G R++ + + G Y ++ A G +
Sbjct: 300 VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA---LV 356
Query: 317 EVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSL 376
E+ ++ +M + G+ P+ ++ L+C YAK G +D + ++
Sbjct: 357 EMHGLL------------DLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Query: 377 VNGD---YLDIIHALAVSGHGE----YIDEIIS-KIQPG 407
+N D Y +I L SG E Y +++I ++ PG
Sbjct: 405 LNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPG 443
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 120/329 (36%), Gaps = 78/329 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y AL+ YL + D ++ G PN VTY L+ C+ GNI A +
Sbjct: 296 YTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG------LCKAGNISKAFE 349
Query: 146 ILEFM--------RDKTFPISEG--------VFNALIYGHSQANDMASAEGILTMMSQAG 189
+ + D FP + + AL+ G +A+ + A +L M +G
Sbjct: 350 VYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSG 409
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
EP+ Y L+ G+ K G +D SA+
Sbjct: 410 CEPNHIVYDALIDGFCKAGKID-----------------------------------SAQ 434
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
+ M++ G PS TYT L+ K G +D ++L+Q + Y +I L
Sbjct: 435 EVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGL 494
Query: 307 AVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIR 366
G E ++ + +M + G P+ TYT L+ G K G +D
Sbjct: 495 CRIGESEKALKLLS---------------LMEEKGCSPNVVTYTALIDGLGKAGKIDLSL 539
Query: 367 RLLAQNGSSLVNGDYLD---IIHALAVSG 392
L Q + +Y+ +I+ L +G
Sbjct: 540 DLFTQMSRKGCSPNYVTYRVLINHLCAAG 568
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 137/340 (40%), Gaps = 44/340 (12%)
Query: 108 KLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIY 167
+++ G+ P+ TY + LI +C+ G IE A + E MR + + ALI+
Sbjct: 248 EMKMVGVTPDVYTY------TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 301
Query: 168 GHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELF 227
+ +A + A I M AG P+ TY L+ G K G++
Sbjct: 302 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISK--------------- 346
Query: 228 LCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+F++ LI +SD A ++ + L P+ TY L+ G K +D LL
Sbjct: 347 ---AFEVYAKLI-GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL 402
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
SS ++ I++ + G + SA F+ M++ G PS
Sbjct: 403 DAMLSSGCEPNH--IVYDALIDGFCKAGKIDSAQEVFLQ----------MTKCGYLPSVH 450
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKI 404
TYT L+ K G +D ++L+Q + Y +I L G E +++S +
Sbjct: 451 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 510
Query: 405 QPGVGYSADAANH---IYHLINKGQIDAAYRIVNTLARSA 441
+ G S + + I L G+ID + + ++R
Sbjct: 511 EEK-GCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 549
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 95/240 (39%), Gaps = 28/240 (11%)
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L+++ PN VTY + +I C+ G E A K+L M +K + + AL
Sbjct: 472 LSQMLKDSCTPNVVTY------TAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTAL 525
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I G +A + + + T MS+ G P+ TY L+ G +D + + +K +
Sbjct: 526 IDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK---Q 582
Query: 226 LFLCFSFQLTNLLIL-VSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVR 284
+ Q I S ++ GIL M G P A Y L+ ++K G ++
Sbjct: 583 TYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAM 642
Query: 285 RLLAQ-----SGSSLVNGDYLDIIHALAVSGHGE-------------YIDEVSAIVCFVN 326
L + S N Y +I AL ++ E ++ E+S VC +
Sbjct: 643 ELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIK 702
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 137/333 (41%), Gaps = 66/333 (19%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP DI YN L+ +Y + K+E +GI + V+Y LI +C++G
Sbjct: 232 VP-DIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYG------FCKEG 284
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+ A ++ ++D P + + LI G+ +AN+ A + MM GL P TY
Sbjct: 285 KMREAMRMFGEIKD-AIP-NHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYN 342
Query: 199 KLM------------------------------C-----GYAKHGDMDS---IKTKI--P 218
++ C Y K GD++S KTK+
Sbjct: 343 SILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEA 402
Query: 219 SLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG 278
L P S F+++ +S++ SA+ +L M AG P+ +TY+ ++ Y K
Sbjct: 403 GLTPNS-----FTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKD 457
Query: 279 DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMS 338
+ D+V LA L G L+I A+ + ++ I C + +H +EG
Sbjct: 458 NTDAV---LALPDEFLSKGFCLNISLYRALI---RRLCKIERIECAEKLLYH-MEGK--- 507
Query: 339 QAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
G+ + YT L Y K G+ ++ +L +
Sbjct: 508 --GISGDSVIYTSLAFSYWKSGNTNAASDMLEE 538
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 103/241 (42%), Gaps = 38/241 (15%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLI------------- 125
VP +I YN L+ + L ++E +G+ P+ TY LI
Sbjct: 197 VP-NIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEAL 255
Query: 126 ----------------SNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGH 169
S + LI +C++G + A ++ ++D P + + LI G+
Sbjct: 256 SVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIKD-AIP-NHVTYTTLIDGY 313
Query: 170 SQANDMASAEGILTMMSQAGLEPSAQTYTKL---MCGYAKHGDMDSIKTKIPSLKPQSEL 226
+AN+ A + MM GL P TY + +C + D + + ++ K Q++
Sbjct: 314 CKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADS 373
Query: 227 FLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
C + L N + D+ SA T M +AGL P++ TY L+ G+ K +++S + L
Sbjct: 374 VTCNT--LINAYCKI-GDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKEL 430
Query: 287 L 287
L
Sbjct: 431 L 431
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 116/291 (39%), Gaps = 38/291 (13%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ + N +LR+ D + + + GI+P VTY L+ + YC+ G ++
Sbjct: 504 DVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDS------YCKGGKVQ 557
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+L M+ + ++ +N LI G S+ + A+G++ M + GL+ SA TY L+
Sbjct: 558 QGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLI 617
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
GY G + + + P + F + L L M+ A L+ M
Sbjct: 618 YGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKL-----GRMSDAMQQLSDML 672
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGS-----SLVNGDYLDIIHALAVSGH 311
L P +Y L+ GY + G++ L + S ++V Y ++ L G
Sbjct: 673 ANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT--YNTLLDGLCRQGE 730
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
E ++ M G+ P TYT L+ G K G +
Sbjct: 731 LEVAQQLKV---------------EMINEGIAPDIVTYTILVNGSCKMGSL 766
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 6/212 (2%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
GE + I YN LL Y D L++++ +G PN VTY LI+ +SK
Sbjct: 532 GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLING---LSK- 587
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
G E A ++ M +S +N LIYG+ +A A + M G P+
Sbjct: 588 --KGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTV 645
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
TY + G K G M ++ + + L S+ ++ A +
Sbjct: 646 ATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 705
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
+ L P+ TY L+ G + G+++ ++L
Sbjct: 706 LRSIYLFPTIVTYNTLLDGLCRQGELEVAQQL 737
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 132/339 (38%), Gaps = 34/339 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y +L+ Y + K+ G+EP+ VTY + L+ C++G
Sbjct: 276 DCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTY------TALMDYLCKNGKST 329
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A KI + + + + L++G++ + +L +M + G++ + +M
Sbjct: 330 EARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIM 389
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
YAKH +D +++ Q ++ ++ + + A + GL
Sbjct: 390 GAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLA 449
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH----GEYIDE 317
P+ +T L+ G D V L + + G LD I A+ G+ G I+
Sbjct: 450 PNIVVFTTLIHGLCTCDKWDKVEELAFE---MIDRGICLDTIFFNAIMGNLCKKGRVIEA 506
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGS 374
+ +M + G+EP+ TY L+ GY G MD +LL NG
Sbjct: 507 KNLF-------------DLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGV 553
Query: 375 SLVNGDYLDIIHALAVSGHGE----YIDEIISK-IQPGV 408
+ Y II+ + +G E + E+ K + PG+
Sbjct: 554 KPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGI 592
Score = 53.5 bits (127), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 128/334 (38%), Gaps = 59/334 (17%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKL-ESQGIEPNRVTYQQLISNSKLISKY 134
EL D+ Y LL+ D++ + D L + + +G P +++ + +I+
Sbjct: 163 ELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCP-----LDVVAYTTVINGL 217
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
++G ++ A + + M D+ ++++I S+ M A + T M + G+ P
Sbjct: 218 LREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDC 277
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
YT L+ GY G KP+ A GI
Sbjct: 278 IMYTSLVHGYCSSG------------KPK-----------------------EAIGIFKK 302
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGH 311
M + G+EP TYT LM K+G R++ L + G + Y ++H A G
Sbjct: 303 MCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEG- 361
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
A+V ++ +M + G++ + +M YAKH +D + +
Sbjct: 362 --------ALVEMHDLL------DLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSN 407
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
+N D ++ L + +D+ +S+
Sbjct: 408 MRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFN 441
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 6/130 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ LD +NA++ + + GIEPN TY LI YC DG
Sbjct: 483 ICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDG------YCLDG 536
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A K+L M S+ +N +I G+SQ + +L M G+ P TY
Sbjct: 537 KMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYE 596
Query: 199 KLMCGYAKHG 208
L+ G + G
Sbjct: 597 MLLQGLFQAG 606
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 126/331 (38%), Gaps = 71/331 (21%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
V L +S +N LLRV L K+ +G+ PN TY I CQ G
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG------LCQRG 265
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++GA +++ + ++ +N LIYG + + AE L M GLEP + TY
Sbjct: 266 ELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYN 325
Query: 199 KLMCGYAKHG-------------------DMDSIKTKIPSL------------------- 220
L+ GY K G D + ++ I L
Sbjct: 326 TLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK 385
Query: 221 --KPQSELFLCFSFQLTNL-LILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKH 277
KP L+ L+N +IL ++ +A+ MS+ GL P QT+ L+ G K
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANE------MSEKGLIPEVQTFNILVNGLCKM 439
Query: 278 G---DMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG 334
G D D + +++ G Y I + HG Y ++ + L+
Sbjct: 440 GCVSDADGLVKVMISKG-------YFPDIFTFNILIHG-YSTQLK-----MENALEILD- 485
Query: 335 PMMSQAGLEPSAQTYTKLMCGYAKHGDMDSI 365
+M G++P TY L+ G K + +
Sbjct: 486 -VMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 115/290 (39%), Gaps = 25/290 (8%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L++ + ++ +G+ P T+ L++ C+ G + A
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG------LCKMGCVSDADG 447
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+++ M K + FN LI+G+S M +A IL +M G++P TY L+ G
Sbjct: 448 LVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K + + ++ + F+F + + + A G+L M + P A
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAV 567
Query: 266 TYTKLMCGYAKHGDMDSV----RRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
T+ L+ G+ K+GD+D R++ S Y IIHA E ++ A
Sbjct: 568 TFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFT-----EKLNVTMAE 622
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
F M L P TY ++ G+ K G+++ + L +
Sbjct: 623 KLFQE----------MVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE 662
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 122/321 (38%), Gaps = 38/321 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ + ++ + + L + SQG E N V Y ++ Y ++ E
Sbjct: 145 DVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF-----YEENFKAE 199
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
G ++ M + FN L+ + D+ E +L + + G+ P+ TY +
Sbjct: 200 GY-ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFI 258
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
G + G++D + L Q ++ + +S AE L M GLE
Sbjct: 259 QGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLE 318
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNG------DYLDIIHALAVSGH---- 311
P + TY L+ GY K G + R++ G ++ NG Y +I L G
Sbjct: 319 PDSYTYNTLIAGYCKGGMVQLAERIV---GDAVFNGFVPDQFTYRSLIDGLCHEGETNRA 375
Query: 312 ----GEYIDE-VSAIVCFVNICFHWL--EGPM---------MSQAGLEPSAQTYTKLMCG 355
E + + + V N L +G + MS+ GL P QT+ L+ G
Sbjct: 376 LALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNG 435
Query: 356 YAKHG---DMDSIRRLLAQNG 373
K G D D + +++ G
Sbjct: 436 LCKMGCVSDADGLVKVMISKG 456
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 89/218 (40%), Gaps = 25/218 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI +N L+ Y + + L + G++P+ TY L++ C+ E
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNG------LCKTSKFE 513
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ + M +K + FN L+ + + A G+L M + P A T+ L+
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 202 CGYAKHGDMDSIKT---------KIPSLKPQSELFL-CFSFQLTNLLILVSSDMASAEGI 251
G+ K+GD+D T K+ S P + + F+ +L ++ AE +
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL---------NVTMAEKL 624
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
M L P TY ++ G+ K G+++ + L +
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE 662
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 83/420 (19%), Positives = 157/420 (37%), Gaps = 83/420 (19%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D + YNA++ V +D+ + ++ +GI P+ ++ + + +C+
Sbjct: 106 DCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSF------TIRMKSFCKT 159
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
A ++L M + ++ + ++ G + N A + M +G+ T+
Sbjct: 160 SRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTF 219
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQ 257
KL+ K GD+ E +L + +
Sbjct: 220 NKLLRVLCKKGDV-----------------------------------KECEKLLDKVIK 244
Query: 258 AGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEY 314
G+ P+ TY + G + G++D R+ L + G Y ++I+ L +
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK--- 301
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGS 374
E + G M+++ GLEP + TY L+ GY K G + R++ G
Sbjct: 302 FQEAEVYL-----------GKMVNE-GLEPDSYTYNTLIAGYCKGGMVQLAERIV---GD 346
Query: 375 SLVNG------DYLDIIHALAVSGHGE----YIDEIISK-IQPGVGYSADAANHIYHLIN 423
++ NG Y +I L G +E + K I+P V I L N
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV---ILYNTLIKGLSN 403
Query: 424 KGQIDAAYRIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAANHIYHLINKG 483
+G I A ++ N ++ I ++ LV + K +G +DA + +I+KG
Sbjct: 404 QGMILEAAQLANEMSEKGLI--PEVQTFNILVNGLCK-----MGCVSDADGLVKVMISKG 456
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 132/339 (38%), Gaps = 34/339 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D Y +L+ Y + K+ G+EP+ VTY + L+ C++G
Sbjct: 277 DCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTY------TALMDYLCKNGKST 330
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A KI + + + + L++G++ + +L +M + G++ + +M
Sbjct: 331 EARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIM 390
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
YAKH +D +++ Q ++ ++ + + A + GL
Sbjct: 391 GAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLA 450
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH----GEYIDE 317
P+ +T L+ G D V L + + G LD I A+ G+ G I+
Sbjct: 451 PNIVVFTTLIHGLCTCDKWDKVEELAFE---MIDRGICLDTIFFNAIMGNLCKKGRVIEA 507
Query: 318 VSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ---NGS 374
+ +M + G+EP+ TY L+ GY G MD +LL NG
Sbjct: 508 KNLF-------------DLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGV 554
Query: 375 SLVNGDYLDIIHALAVSGHGE----YIDEIISK-IQPGV 408
+ Y II+ + +G E + E+ K + PG+
Sbjct: 555 KPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGI 593
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 128/334 (38%), Gaps = 59/334 (17%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKL-ESQGIEPNRVTYQQLISNSKLISKY 134
EL D+ Y LL+ D++ + D L + + +G P V ++ + +I+
Sbjct: 164 ELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDV-----VAYTTVINGL 218
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
++G ++ A + + M D+ ++++I S+ M A + T M + G+ P
Sbjct: 219 LREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDC 278
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
YT L+ GY G KP+ A GI
Sbjct: 279 IMYTSLVHGYCSSG------------KPK-----------------------EAIGIFKK 303
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGH 311
M + G+EP TYT LM K+G R++ L + G + Y ++H A G
Sbjct: 304 MCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEG- 362
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
A+V ++ +M + G++ + +M YAKH +D + +
Sbjct: 363 --------ALVEMHDLL------DLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSN 408
Query: 372 NGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
+N D ++ L + +D+ +S+
Sbjct: 409 MRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFN 442
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 6/130 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ LD +NA++ + + GIEPN TY LI YC DG
Sbjct: 484 ICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDG------YCLDG 537
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ A K+L M S+ +N +I G+SQ + +L M G+ P TY
Sbjct: 538 KMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYE 597
Query: 199 KLMCGYAKHG 208
L+ G + G
Sbjct: 598 MLLQGLFQAG 607
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 118/303 (38%), Gaps = 38/303 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YNAL++ + + L K+ G+ P+ VTY LI C DG+IE
Sbjct: 216 NVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQ------CIDGHIE 269
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++L M + +NALI + A + + G++P+A T+ L+
Sbjct: 270 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 329
Query: 202 CGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI--LTM 254
G K G +D K P + + F L + S EG+ +
Sbjct: 330 NGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM-------KGSQEGLSFIGE 382
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
M Q ++PS YT ++ K + V R + SS N D Y + A + G
Sbjct: 383 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 442
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
++E ++ +E MS+ G+ Y LM G+A G D +L Q
Sbjct: 443 ---LNEAENVL---------ME---MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 487
Query: 372 NGS 374
S
Sbjct: 488 MTS 490
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 149/366 (40%), Gaps = 33/366 (9%)
Query: 104 DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFN 163
+ L ++ +G+ P VT + +I+ YC++G + A ++LE M+ + + +N
Sbjct: 168 EMLQEMFEKGLAPCVVTC------TAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYN 221
Query: 164 ALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQ 223
AL+ G + A +L M G+ P A TY L+ G G ++S + ++
Sbjct: 222 ALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD 281
Query: 224 SELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSV 283
+ +++ + A + + G++P+A T+ L+ G K G +D
Sbjct: 282 GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIA 341
Query: 284 RRLLAQSGSSLVNGD---YLDII-HALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQ 339
+ L + S+ D Y I H + G E + + G M+ Q
Sbjct: 342 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFI---------------GEML-Q 385
Query: 340 AGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALAVSGHGEY 396
++PS YT ++ K + + R + SS N D Y + A + G
Sbjct: 386 KDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNE 445
Query: 397 IDEIISKI-QPGVGYSADAANHIYH-LINKGQIDAAYRIVNTLARSANINGEQLPVGGFL 454
+ ++ ++ + GV A N + + GQ D A I+ + A++ + L
Sbjct: 446 AENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYF--IL 503
Query: 455 VRHMVK 460
+RH+V+
Sbjct: 504 LRHLVR 509
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 116 PNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDM 175
PN TY S ++ + +DG E AT ++ M++ + ++E ++ AL+ ++
Sbjct: 547 PNSGTY------SSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRY 600
Query: 176 ASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKI--PSLKPQSELFLCFSFQ 233
A ++ M Q G P +Y L+ G G D K K S + +
Sbjct: 601 LDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVI 660
Query: 234 LTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKL 270
+ L+ SD++ ++ M+ + PS QTY L
Sbjct: 661 IDGLIKKGHSDISRE--MIIMLERMNCRPSHQTYAML 695
>gi|357125390|ref|XP_003564377.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g61870, mitochondrial-like [Brachypodium
distachyon]
Length = 390
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 18/184 (9%)
Query: 138 GNIEGATKILEFMRDKTFPISEGV------FNALIYGHSQANDMASAEGILTMMSQAGLE 191
GN A +I + TFP + V FNA+I S++ S + M + G++
Sbjct: 147 GNHAEAARIFQ-----TFPDAHNVKPNTETFNAIIKSFSESGTTRSFYSVFDEMCKKGVK 201
Query: 192 PSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQS--ELFLCFSFQLTNLLILVSSDMASAE 249
P+A T+T + G+ K ++ I +K E ++ ++ L L S A+
Sbjct: 202 PNATTFTTAIAGFYKEEQFGDVEKVIELMKKHGCGESLQVYNARVQGLCKLGRS--GEAK 259
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHAL 306
+L M + G +PS TY L+ G+ K GD++ V+RL + G + GD Y +I L
Sbjct: 260 ALLNEMVKRGTKPSWVTYNHLIYGFCKEGDLEEVKRLYKEMGKKGLVGDSSFYFTLIFYL 319
Query: 307 AVSG 310
+G
Sbjct: 320 CKAG 323
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 8/213 (3%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+V + +NA+++ + ++ T S ++ +G++PN T+ I+ K Q
Sbjct: 164 NVKPNTETFNAIIKSFSESGTTRSFYSVFDEMCKKGVKPNATTFTTAIAG---FYKEEQF 220
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G++E K++E M+ S V+NA + G + A+ +L M + G +PS TY
Sbjct: 221 GDVE---KVIELMKKHGCGESLQVYNARVQGLCKLGRSGEAKALLNEMVKRGTKPSWVTY 277
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS-DMASAEGILTMMS 256
L+ G+ K GD++ +K + + L SF T + L + D SA G+ +
Sbjct: 278 NHLIYGFCKEGDLEEVKRLYKEMGKKG-LVGDSSFYFTLIFYLCKAGDFDSALGVYNETT 336
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
P T L+ G A +D + ++ +
Sbjct: 337 ARSWVPCFSTMKMLVNGLAGSSKVDEAKGIIEK 369
Score = 50.8 bits (120), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 62/243 (25%)
Query: 182 LTMMSQAGL----------EPSAQTYTKLM--CGYA-KHGDMDSIKTKIP---SLKPQSE 225
+ + QAGL PS ++ L+ C A H + I P ++KP +E
Sbjct: 111 IALFGQAGLLPDAISTFQSSPSTRSLNALLFACLVAGNHAEAARIFQTFPDAHNVKPNTE 170
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTM---MSQAGLEPSAQTYTKLMCGYAKH---GD 279
F N +I S+ + ++ M + G++P+A T+T + G+ K GD
Sbjct: 171 TF--------NAIIKSFSESGTTRSFYSVFDEMCKKGVKPNATTFTTAIAGFYKEEQFGD 222
Query: 280 MDSVRRLLAQSGSSLVNGDYLDIIHA-------LAVSGHGEYIDEVSAIVCFVNICFHWL 332
++ V L+ + G G+ L + +A L SG E A++
Sbjct: 223 VEKVIELMKKHGC----GESLQVYNARVQGLCKLGRSG------EAKALL---------- 262
Query: 333 EGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGD---YLDIIHALA 389
M + G +PS TY L+ G+ K GD++ ++RL + G + GD Y +I L
Sbjct: 263 --NEMVKRGTKPSWVTYNHLIYGFCKEGDLEEVKRLYKEMGKKGLVGDSSFYFTLIFYLC 320
Query: 390 VSG 392
+G
Sbjct: 321 KAG 323
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 6/138 (4%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YNA ++ + L ++ +G +P+ VTY LI +C++G++E +
Sbjct: 242 YNARVQGLCKLGRSGEAKALLNEMVKRGTKPSWVTYNHLIYG------FCKEGDLEEVKR 295
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ + M K + LI+ +A D SA G+ + P T L+ G A
Sbjct: 296 LYKEMGKKGLVGDSSFYFTLIFYLCKAGDFDSALGVYNETTARSWVPCFSTMKMLVNGLA 355
Query: 206 KHGDMDSIKTKIPSLKPQ 223
+D K I +K +
Sbjct: 356 GSSKVDEAKGIIEKMKEK 373
>gi|449460864|ref|XP_004148164.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Cucumis sativus]
Length = 693
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 28/206 (13%)
Query: 86 YNALLRVYLDNEHTFS-PTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
YN+L+R L E F + ++ + PN TY LI ++++YC+ GN+ A
Sbjct: 505 YNSLIR-RLCKERLFEDAMSLIDHMKDYSLFPNTTTY--LI----IVNEYCRQGNVTAAY 557
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
IL MR S +++++I S+ + AE + MM +AG++P + Y ++ GY
Sbjct: 558 HILRKMRQVGLKPSVAIYDSIIRCLSREKRICEAEVVFKMMLEAGMDPDKKFYLTMIKGY 617
Query: 205 AKHGDM--------DSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM-- 254
+K+G + ++ IP P S ++ T L+ + + +G L +
Sbjct: 618 SKNGRILEACELFEQMVENSIP---PSSHIY-------TALIRGLGMKNMTDKGCLYLGK 667
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDM 280
MS+ G P+ Y+ LM Y + G++
Sbjct: 668 MSRNGFLPNVVLYSTLMNHYLRVGEV 693
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 92/226 (40%), Gaps = 44/226 (19%)
Query: 67 EDPFSVHTGEL---DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQ 123
E F + E+ D+ L ++ ++ + E+ D+L + S G +P TY
Sbjct: 448 EQKFEIVLKEISISDLNLAGVAFSIVISALCETENFCYALDYLHNMVSLGCKPLLFTY-- 505
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
+ LI + C++ E A +++ M+D + + + ++ + + ++ +A IL
Sbjct: 506 ----NSLIRRLCKERLFEDAMSLIDHMKDYSLFPNTTTYLIIVNEYCRQGNVTAAYHILR 561
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSS 243
M Q GL+PS Y DSI C S +
Sbjct: 562 KMRQVGLKPSVAIY-------------DSI-------------IRCLSRE---------K 586
Query: 244 DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ 289
+ AE + MM +AG++P + Y ++ GY+K+G + L Q
Sbjct: 587 RICEAEVVFKMMLEAGMDPDKKFYLTMIKGYSKNGRILEACELFEQ 632
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 120/310 (38%), Gaps = 45/310 (14%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP +S +NA+ R ++ ++ GI Y + L+ C G
Sbjct: 148 VPSKVS-FNAIFRELCAQGRVLEAFNYFVRVNGAGI------YLGCWCFNVLMDGLCNQG 200
Query: 139 NIEGATKILEFMRDKT-FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+ A ++ + M+ +P + +F L YG ++ + AE ++ M L P Y
Sbjct: 201 FMGEALELFDIMQSTNGYPPTLHLFKTLFYGLCKSGWLVEAELLIREMEFRSLYPDKTMY 260
Query: 198 TKLMCGYAKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGIL 252
T L+ GY + M + + KP +F L +L+ +G L
Sbjct: 261 TSLIHGYCRDRKMKMAMQALFRMVKIGCKPD-------TFTLNSLIHGFVKLGLVEKGWL 313
Query: 253 T--MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSG 310
+M G++P T+ ++ Y + G +DS +L +S+V+ + +H V
Sbjct: 314 VYKLMEDWGIQPDVVTFHIMIGKYCQEGKVDSALMIL----NSMVSSNLSPSVHCYTVLS 369
Query: 311 HGEY----IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD--- 363
Y ++EV + L+G M G+ P + LM Y K ++
Sbjct: 370 SALYRNGRLEEVDGL----------LKG--MLDNGIIPDHVLFLTLMKMYPKGHELQLAL 417
Query: 364 SIRRLLAQNG 373
+I + +NG
Sbjct: 418 NILETIVKNG 427
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 135/348 (38%), Gaps = 42/348 (12%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + ++ YNAL+ ++ F + ++ +GI PN +TY +I +C
Sbjct: 316 ERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG------FC 369
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ ++ A + M K F LI G+ A + +L M + GL +
Sbjct: 370 KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 429
Query: 196 TYTKLMCGYAKHGDMDS--------IKTKI-PSLKPQSELF--LCFSFQLTNLLILVSSD 244
TY L+ G+ GD+++ I + + P + + L LC + +L + L + +
Sbjct: 430 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLD 301
S + G+EP TY L+CG G L + + D Y
Sbjct: 490 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 549
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+I L +DE + + FV+ M P+ T+ L+ GY K G
Sbjct: 550 MIDGLCKQSR---LDEATQM--FVS----------MGSKSFSPNVVTFNTLINGYCKAGR 594
Query: 362 MDSIRRLLAQNGSSLVNGD---YLDIIHALA----VSGHGEYIDEIIS 402
+D L + G + D Y+ +I+ ++G + E+IS
Sbjct: 595 VDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 642
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 112/275 (40%), Gaps = 26/275 (9%)
Query: 95 DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT 154
D H+ S F+ +++ +GI PN VTY +I +C G A ++L+ M ++
Sbjct: 266 DGRHSDSHNLFI-EMQDKGIFPNIVTYNCMIGG------FCISGRWSAAQRLLQEMLERK 318
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
+ +NALI + A + M G+ P+ TY ++ G+ K +D+ +
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG--ILTMMSQAGLEPSAQTYTKLMC 272
+ + F+F T L+ +G +L M + GL + TY L+
Sbjct: 379 DMFYLMATKGCSPDVFTF--TTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIH 436
Query: 273 GYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVSAIVCFVNICFHW 331
G+ GD+++ L Q SS V D + L + +G+ D + F
Sbjct: 437 GFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM--------FKA 488
Query: 332 LEGPMMSQ------AGLEPSAQTYTKLMCGYAKHG 360
++ M G+EP TY L+CG G
Sbjct: 489 MQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 523
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 118/315 (37%), Gaps = 54/315 (17%)
Query: 79 VPLDISHYNALLRVYLD-NEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+ DI + L++ + ++ F+ + F KL G+ P+ VT+ + L+ C D
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTF-GKLTKLGLHPDVVTF------TTLLHGLCLD 164
Query: 138 GNIEGATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+ A + + R F L+ G + + A +L M + GL+P T
Sbjct: 165 HRVSEALDLFHQICRPDVL-----TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQIT 219
Query: 197 YTKLMCGYAKHGDMDSI------KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
Y + G K GD S +I +KP ++ L + +
Sbjct: 220 YGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCK-----DGRHSDSHN 274
Query: 251 ILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALA 307
+ M G+ P+ TY ++ G+ G + +RLL + ++ + Y +I+A
Sbjct: 275 LFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFV 334
Query: 308 VSGH----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMD 363
G E DE M G+ P+ TY ++ G+ K +D
Sbjct: 335 KEGKFFEAAELYDE-------------------MLPRGIIPNTITYNSMIDGFCKQDRLD 375
Query: 364 S---IRRLLAQNGSS 375
+ + L+A G S
Sbjct: 376 AAEDMFYLMATKGCS 390
Score = 39.3 bits (90), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 7/126 (5%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
VP D Y++++ T + S+ PN VT+ LI+ YC+ G
Sbjct: 541 VP-DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING------YCKAG 593
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
++ ++ M + ++ LIYG + ++ A I M +G+ P T
Sbjct: 594 RVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIR 653
Query: 199 KLMCGY 204
++ G+
Sbjct: 654 NMLTGF 659
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 135/348 (38%), Gaps = 42/348 (12%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E + ++ YNAL+ ++ F + ++ +GI PN +TY +I +C
Sbjct: 316 ERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDG------FC 369
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
+ ++ A + M K F LI G+ A + +L M + GL +
Sbjct: 370 KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 429
Query: 196 TYTKLMCGYAKHGDMDS--------IKTKI-PSLKPQSELF--LCFSFQLTNLLILVSSD 244
TY L+ G+ GD+++ I + + P + + L LC + +L + L + +
Sbjct: 430 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Query: 245 MASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLD 301
S + G+EP TY L+CG G L + + D Y
Sbjct: 490 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 549
Query: 302 IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGD 361
+I L +DE + + FV+ M P+ T+ L+ GY K G
Sbjct: 550 MIDGLCKQSR---LDEATQM--FVS----------MGSKSFSPNVVTFNTLINGYCKAGR 594
Query: 362 MDSIRRLLAQNGSSLVNGD---YLDIIHALA----VSGHGEYIDEIIS 402
+D L + G + D Y+ +I+ ++G + E+IS
Sbjct: 595 VDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMIS 642
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 22/273 (8%)
Query: 95 DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKT 154
D H+ S F+ +++ +GI PN VTY +I +C G A ++L+ M ++
Sbjct: 266 DGRHSDSHNLFI-EMQDKGIFPNIVTYNCMIGG------FCISGRWSAAQRLLQEMLERK 318
Query: 155 FPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIK 214
+ +NALI + A + M G+ P+ TY ++ G+ K +D+ +
Sbjct: 319 ISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAE 378
Query: 215 TKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 274
+ + F+F + + +L M + GL + TY L+ G+
Sbjct: 379 DMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGF 438
Query: 275 AKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL-AVSGHGEYIDEVSAIVCFVNICFHWLE 333
GD+++ L Q SS V D + L + +G+ D + F ++
Sbjct: 439 CLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM--------FKAMQ 490
Query: 334 GPMMSQ------AGLEPSAQTYTKLMCGYAKHG 360
M G+EP TY L+CG G
Sbjct: 491 KSKMDLDASHPFNGVEPDVLTYNILICGLINEG 523
Score = 44.3 bits (103), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 112/314 (35%), Gaps = 52/314 (16%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
+ DI + L++ + KL G+ P+ VT+ + L+ C D
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTF------TTLLHGLCLDH 165
Query: 139 NIEGATKIL-EFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
+ A + + R F L+ G + + A +L M + GL+P TY
Sbjct: 166 RVSEALDLFHQICRPDVL-----TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITY 220
Query: 198 TKLMCGYAKHGDMDSI------KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGI 251
+ G K GD S +I +KP ++ L + + +
Sbjct: 221 GTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCK-----DGRHSDSHNL 275
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAV 308
M G+ P+ TY ++ G+ G + +RLL + ++ + Y +I+A
Sbjct: 276 FIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVK 335
Query: 309 SGH----GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
G E DE M G+ P+ TY ++ G+ K +D+
Sbjct: 336 EGKFFEAAELYDE-------------------MLPRGIIPNTITYNSMIDGFCKQDRLDA 376
Query: 365 ---IRRLLAQNGSS 375
+ L+A G S
Sbjct: 377 AEDMFYLMATKGCS 390
Score = 39.3 bits (90), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
T + S+ PN VT+ LI+ YC+ G ++ ++ M + ++
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLING------YCKAGRVDDGLELFCEMGRRGIVADAIIY 617
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
LIYG + ++ A I M +G+ P T ++ G+
Sbjct: 618 ITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGF 659
>gi|108707772|gb|ABF95567.1| PPR2, putative, expressed [Oryza sativa Japonica Group]
Length = 443
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 13/224 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ N +L ++ + S + K GIEP T + LI Y + +
Sbjct: 230 DVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTL------NILIGAYGKKRMYD 283
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ ++E+MR FP + FN +I + A D + E M G++P +T+ L+
Sbjct: 284 KMSAVMEYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEGMKPDTKTFCCLI 343
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV---SSDMASAEGILTMMSQA 258
G+ G + + +K L + N +++ + D+ E + M Q
Sbjct: 344 NGFGNAGLFHKV---VGMVKLAERLGVPMDTTFHNAVLMTCVKAEDLMEMERVFMRMKQI 400
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDI 302
P A TY+ L+ Y K G D + +L Q +LV D + +
Sbjct: 401 QCIPDATTYSILVGAYRKEGMTDKI-YVLQQENPTLVPTDLVHV 443
Score = 47.0 bits (110), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 48/273 (17%), Positives = 115/273 (42%), Gaps = 26/273 (9%)
Query: 143 ATKILEFMRDKTF--PISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
++++ + ++++ F P EG F L+ ++ + A + M Q G +P+ + YT L
Sbjct: 72 SSQVFQMLKEQPFYHP-KEGTFMKLLLLLGRSGQPSRARYLFDEMLQQGCQPTPELYTAL 130
Query: 201 MCGYAKHGDMDSIKTKIPSLKPQSELFLC----FSFQLTNLLILVSSDMASAEGILTMMS 256
+ Y ++G +D + +K +C +++ + +S + + M+
Sbjct: 131 IAAYCRNGLLDDAFRLLADMKASP---VCQPDVYTYSTIIKACVDASRFDIVDAMYKDMA 187
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL-AQSGSSLVNGDYLDIIHALAVSGHGEYI 315
+ P+ T ++ GY + G +D + ++L A S+ D + L++ G+ I
Sbjct: 188 DRSIAPNTVTQNIVLSGYGRAGRLDDMEKVLSAMLDSTTSKPDVWTMNIILSLFGNRGQI 247
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK---HGDMDSIRRLLAQN 372
+ + W E G+EP +T L+ Y K + M ++ + +
Sbjct: 248 ESME----------KWYEK--FRGYGIEPETRTLNILIGAYGKKRMYDKMSAVMEYMRKL 295
Query: 373 GSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
+ ++I A A +G + ++ ++++
Sbjct: 296 AFPWTTATFNNVIEAFADAGDAKNMEHTFNQMR 328
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 65/305 (21%), Positives = 116/305 (38%), Gaps = 22/305 (7%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAK-LESQGIEPNRVTYQQLISNSKLISKYCQDGNI 140
D+ Y+ +++ +D F D + K + + I PN VT Q ++ +S Y + G +
Sbjct: 159 DVYTYSTIIKACVDASR-FDIVDAMYKDMADRSIAPNTVT-QNIV-----LSGYGRAGRL 211
Query: 141 EGATKILEFMRDKTFPISE-GVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTK 199
+ K+L M D T + N ++ + S E G+EP +T
Sbjct: 212 DDMEKVLSAMLDSTTSKPDVWTMNIILSLFGNRGQIESMEKWYEKFRGYGIEPETRTLNI 271
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
L+ Y K D + + ++ + + +F + D + E M G
Sbjct: 272 LIGAYGKKRMYDKMSAVMEYMRKLAFPWTTATFNNVIEAFADAGDAKNMEHTFNQMRAEG 331
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
++P +T+ L+ G+ G V ++ + V D L E + E+
Sbjct: 332 MKPDTKTFCCLINGFGNAGLFHKVVGMVKLAERLGVPMDTTFHNAVLMTCVKAEDLMEME 391
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNG 379
+ F+ M Q P A TY+ L+ Y K G D I +L Q +LV
Sbjct: 392 RV--FMR----------MKQIQCIPDATTYSILVGAYRKEGMTDKI-YVLQQENPTLVPT 438
Query: 380 DYLDI 384
D + +
Sbjct: 439 DLVHV 443
>gi|255660918|gb|ACU25628.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 484
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 17/218 (7%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
EL V Y+ L +V L + K+ S+GIEP R T+ +I +
Sbjct: 108 ELGVERTTKSYDTLFKVILRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWG------FF 161
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
G +E A + + M+ + +N +I G+ + M AE M +EP+
Sbjct: 162 LSGKVETANRFFDDMKSREISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVV 221
Query: 196 TYTKLMCGYAKHGDMDSI-----KTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEG 250
TYT L+ GY +D + K +KP + + L N + M+ A
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCN-----AEKMSEARS 276
Query: 251 ILTMMSQAGLEPSAQT-YTKLMCGYAKHGDMDSVRRLL 287
+L M + P+ + + +L+ G K G++D+ +L
Sbjct: 277 VLKEMVDKYIAPTDNSIFMRLISGQCKTGNLDAAADVL 314
Score = 45.4 bits (106), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 108/278 (38%), Gaps = 24/278 (8%)
Query: 171 QANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFL-- 228
+A+ + A IL M + GLE + ++ Y K G ++ + + EL +
Sbjct: 57 RASKLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKAG---IVQESVKLFQKMEELGVER 113
Query: 229 -CFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
S+ +IL A+ M G+EP+ T+ ++ G+ G +++ R
Sbjct: 114 TTKSYDTLFKVILRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFF 173
Query: 288 AQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQ 347
S ++ D I + ++G+ A FV M +EP+
Sbjct: 174 DDMKSREISPDV--ITYNTMINGYYRVKKMDEAEKYFVE----------MKGRNIEPTVV 221
Query: 348 TYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQPG 407
TYT L+ GY +D RL+ + + + + L + E + E S ++
Sbjct: 222 TYTTLIKGYVSVDQVDDALRLVEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSVLKEM 281
Query: 408 V-GYSADAANHIYHLINKGQ-----IDAAYRIVNTLAR 439
V Y A N I+ + GQ +DAA ++ + R
Sbjct: 282 VDKYIAPTDNSIFMRLISGQCKTGNLDAAADVLKAMIR 319
>gi|297792071|ref|XP_002863920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309755|gb|EFH40179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 498
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 12/215 (5%)
Query: 75 GELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKY 134
GE D D N+ LR + N + K +S GIEPN T+ L+ + Y
Sbjct: 274 GEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDS------Y 327
Query: 135 CQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSA 194
+ GN + + ++E+M+ + + +N +I +A D+ E + +M + PS
Sbjct: 328 GKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIIPSC 387
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDM---ASAEGI 251
T L+ Y + G D I + ++ S++ L F N L+ M A +G+
Sbjct: 388 VTLCSLVRAYGRAGKADKIGGVLRFIE-NSDIRLDLVF--FNCLVDAYGRMEKFAEMKGV 444
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRL 286
L +M + G +P TY ++ Y G V+ L
Sbjct: 445 LELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 479
Score = 44.3 bits (103), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/287 (16%), Positives = 103/287 (35%), Gaps = 30/287 (10%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ Y+ L++ +L D L+ + GI PN +T+ +E
Sbjct: 223 DVHTYSILIKSFLQVFAFDKVHDLLSDMRRLGIRPNTITF------------------VE 264
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+ +++ + + N+ + + E +G+EP+ +T+ L+
Sbjct: 265 MESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILL 324
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
Y K G+ + + ++ + ++ + + D+ E + +M +
Sbjct: 325 DSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERII 384
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAI 321
PS T L+ Y + G D + +L +S + D + + G E E+ +
Sbjct: 385 PSCVTLCSLVRAYGRAGKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGV 444
Query: 322 VCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRL 368
+ +M + G +P TY ++ Y G ++ L
Sbjct: 445 L------------ELMEKKGFKPDKITYRTMVKAYRISGMTTHVKEL 479
>gi|242037185|ref|XP_002465987.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
gi|241919841|gb|EER92985.1| hypothetical protein SORBIDRAFT_01g049600 [Sorghum bicolor]
Length = 480
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 16/214 (7%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
+VP DI N+++ Y ++ T ++ + G+EP+ T+ +I + Y +
Sbjct: 264 NVP-DIYTMNSVIGAYGNHGRTDEMEKSYSEFQLMGVEPDTKTFNIMIKS------YGKA 316
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
G + I +M+ + F + FN +I +A ++ E +M G++P+ TY
Sbjct: 317 GMYDKMMSIFRYMKKRFFSPTAVTFNTVIECFGRAGNIEKMEYYFRLMKIQGVKPNPITY 376
Query: 198 TKLMCGYAKHGDMDSIKTKIPSLKPQSE-LFLCFSFQLTNLLILV---SSDMASAEGILT 253
L+ GY+K G +D K+P + Q+E + N +I S D+ E +L
Sbjct: 377 CSLVNGYSKAGLLD----KVPGIIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQ 432
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
+M + +P TY ++ Y G MD RLL
Sbjct: 433 LMKEKKCKPDKITYATMIQAYTAQG-MDEAARLL 465
Score = 48.1 bits (113), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 167 YG-HSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
YG H + ++M + +M G+EP +T+ ++ Y K G D + + +K +
Sbjct: 278 YGNHGRTDEMEKSYSEFQLM---GVEPDTKTFNIMIKSYGKAGMYDKMMSIFRYMKKRFF 334
Query: 226 LFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRR 285
+F + ++ E +M G++P+ TY L+ GY+K G +D V
Sbjct: 335 SPTAVTFNTVIECFGRAGNIEKMEYYFRLMKIQGVKPNPITYCSLVNGYSKAGLLDKVPG 394
Query: 286 LLAQSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGL 342
++ Q+ ++ V D + +I A A SG + ++E+ + M +
Sbjct: 395 IIRQTENTNVVLDTPFFNCVISAYAKSGDIKIMEEMLQL---------------MKEKKC 439
Query: 343 EPSAQTYTKLMCGYAKHGDMDSIRRLL 369
+P TY ++ Y G MD RLL
Sbjct: 440 KPDKITYATMIQAYTAQG-MDEAARLL 465
>gi|222612695|gb|EEE50827.1| hypothetical protein OsJ_31237 [Oryza sativa Japonica Group]
Length = 550
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
+I N +LR + D T + L K+ G+ R T +S + LI+ YC+DG
Sbjct: 252 NIYTANMVLRAFCDLGRTADAAEVLDKMPEWGV--GRTT----VSFNTLIAAYCRDGVDA 305
Query: 142 GATKILEFMRDKTFPISEGV-FNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKL 200
G L+ ++ + + V ++ +I+G + M A +L+ M G+ P+ TY L
Sbjct: 306 GPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTL 365
Query: 201 MCGYAKHGDMDSIKTKIPS--LKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
+ GY GD +++ ++ +K + EL + ++ L + M E +L + +A
Sbjct: 366 IHGYVALGD-NAMAGRVHEEMVKNRVELDI-VTYNALILGLCNEGKMKKVEHLLRELDRA 423
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLL 287
LEP+A T++ L+ G+ K + + +LL
Sbjct: 424 KLEPNASTFSALIVGWCKMQNSERALQLL 452
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)
Query: 86 YNALLRVYLDNEHTFSPT-DFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGAT 144
+N L+ Y + P K+E +G+ P+ VTY +I C++G + A
Sbjct: 291 FNTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHG------LCKEGRMGKAN 344
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
++L MR K + +N LI+G+ D A A + M + +E TY L+ G
Sbjct: 345 QVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGL 404
Query: 205 AKHGDMDSIKTKI-----PSLKPQSELFLCFSFQLTNLLILVSSDMASAEG---ILTMMS 256
G M ++ + L+P + F + LI+ M ++E +L +M
Sbjct: 405 CNEGKMKKVEHLLRELDRAKLEPNASTF--------SALIVGWCKMQNSERALQLLNVMK 456
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMD 281
++G P+ TY ++ + K+ D++
Sbjct: 457 KSGFHPNYTTYKMVISSFCKNKDLE 481
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 7/202 (3%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
+ L+R + + L ++ G EP+ + L+ C++G+++ A
Sbjct: 161 FVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVF------GCLLDALCKNGSVKEAAS 214
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ E MR + P + F +L+YG + + A+ +L + +AG EP Y L+ GYA
Sbjct: 215 LFEDMRIRFTPTLKH-FTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYA 273
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
G M + ++ + SF + M A + M G A
Sbjct: 274 AAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAV 333
Query: 266 TYTKLMCGYAKHGDMDSVRRLL 287
TYT L+ G+ K G + LL
Sbjct: 334 TYTTLISGFCKWGKISKGYELL 355
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 96/474 (20%), Positives = 176/474 (37%), Gaps = 79/474 (16%)
Query: 118 RVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMAS 177
R +Y+ + K++ K Q G + I E R+ +S VF L+ + A +
Sbjct: 119 RHSYEVYKAMIKILGKMRQFGAVWAL--IEEMRRENPQFVSPYVFVVLMRRFASARMVKK 176
Query: 178 AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNL 237
A +L M + G EP + L+ K+G S+K + LF + T
Sbjct: 177 AIEVLDEMPKYGCEPDEHVFGCLLDALCKNG----------SVKEAASLFEDMRIRFTPT 226
Query: 238 LILVSS---------DMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLA 288
L +S + A+ +L + +AG EP Y L+ GYA G M LL
Sbjct: 227 LKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLK 286
Query: 289 QSGSSLVNGD---YLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPS 345
+ + + +I AL E A+ F M G
Sbjct: 287 EMRRKECEPNVMSFTTLIQALCAKKKME-----EAMRVFFE----------MQSCGCPAD 331
Query: 346 AQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
A TYT L+ G+ K G + LL + + +H +A E ++E I ++
Sbjct: 332 AVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELME 391
Query: 406 P--GVGYSADAANHIYHLINK-----GQIDAAYRIVNTL---ARSANINGEQLPVGGFLV 455
+G + D +IY+++ + G+I R+ N + S ++ + + GFL
Sbjct: 392 EMRKIGCTPDL--NIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLS 449
Query: 456 RHMVKTNQPGVGYSADAANHIYHLINKGQIDAAY-----RIVNTLARSANI--------- 501
+ + +A ++ +G + A ++N+L R+ +
Sbjct: 450 QRCL----------VEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSC 499
Query: 502 ---NGEQLPVGGFLVR-HMVKTNQPIDKVLAVCHRLTDENLHPRAFNLAVLIKA 551
G L V + + H + +N + + + C + D + P+ A L++
Sbjct: 500 IMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRG 553
Score = 52.0 bits (123), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 130/344 (37%), Gaps = 48/344 (13%)
Query: 46 FVYLNSKWCSEPSLGPGNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDF 105
F L WC E G L V E DI YN LL Y D
Sbjct: 230 FTSLLYGWCRE-----GKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDL 284
Query: 106 LAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNAL 165
L ++ + EPN +++ + LI C +E A ++ M+ P + L
Sbjct: 285 LKEMRRKECEPNVMSF------TTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTL 338
Query: 166 IYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSE 225
I G + ++ +L M Q G P+ TY +M A H + ++ I ++ +
Sbjct: 339 ISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIM---AAHEKKEELEECIELMEEMRK 395
Query: 226 LFLCFSFQLTNLLILVSSDMAS-AEGILTM--MSQAGLEPSAQTYTKLMCGY-AKHGDMD 281
+ + N++I ++ + EG+ M GL P T+ ++ G+ ++ ++
Sbjct: 396 IGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVE 455
Query: 282 SVRRLLAQSGSSLVN----GDYLDIIHALAVSGHGEYIDEVSAIV----CFVNI------ 327
+ G L++ G +++++L + E +V + + C +N+
Sbjct: 456 ACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIW 515
Query: 328 -------------CFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
C + L+ M AG+ P T+ KLM G K
Sbjct: 516 IHALFSNGHVKEACSYCLD---MMDAGVMPQPDTFAKLMRGLRK 556
>gi|302761054|ref|XP_002963949.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
gi|300167678|gb|EFJ34282.1| hypothetical protein SELMODRAFT_166434 [Selaginella moellendorffii]
Length = 1365
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 30/264 (11%)
Query: 103 TDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVF 162
++F +L GI PN T+ + + ++GN+E A + M++ F S VF
Sbjct: 736 SEFFQRLPEMGISPNSRTF------VVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVF 789
Query: 163 NALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKP 222
AL+ +S+ AE ++ + +AGLE Y ++ Y+K G S + K
Sbjct: 790 KALLALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLG---SYRNAALVFKG 846
Query: 223 QSELFLCFSFQLTNLLILVSSD---MASAEGILTMMSQAGLEPSAQTYTKLMCGYAK--- 276
E+ N LI++ S + A+ +L M + G P+ TYT L+ Y +
Sbjct: 847 MQEIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQA 906
Query: 277 HGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPM 336
+ D + V + +A++G Y +I+ +G I+E+
Sbjct: 907 YEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEII---------------EQ 951
Query: 337 MSQAGLEPSAQTYTKLMCGYAKHG 360
M G EPS T LM Y K G
Sbjct: 952 MKVDGFEPSLTTIHMLMDSYGKGG 975
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 26/207 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YNA++ VY + + ++ QG P+ VTY + ++ + +DG IE
Sbjct: 230 DIWTYNAMISVYGRAGRVEAASSIFRIMQEQGFTPDAVTY------NSVLHAFARDGRIE 283
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
+I MRD E +N +I+ + +A AE + M + G P + T+T L+
Sbjct: 284 EVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLI 343
Query: 202 CGYAKHGDM--------DSIKTKI-PSLKPQSELFLCFSFQLTNLLILVSSDM-ASAEGI 251
K G + D +K+++ P+L+ S + ++ +DM AE
Sbjct: 344 DTLGKAGFVNEAAAMFEDMLKSQVRPTLQAFSAMICAYA----------KADMFTDAEHT 393
Query: 252 LTMMSQAGLEPSAQTYTKLMCGYAKHG 278
+ M +AG+ P Y+ ++ + K G
Sbjct: 394 YSCMLRAGVRPDLLAYSVMLDVFFKAG 420
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 114/303 (37%), Gaps = 70/303 (23%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEG-AT 144
YN+L+ VY + S L +++ +G P+ VT+ + +I + G EG A+
Sbjct: 128 YNSLMSVYARHGDWNSVQQLLCRMQDRGCRPDLVTF------NIVIKARTRGGMQEGLAS 181
Query: 145 KILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGY 204
+L+ + +N LI S N ++ A I M + G +P TY ++ Y
Sbjct: 182 SLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVY 241
Query: 205 AKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSA 264
+ G ++ +A I +M + G P A
Sbjct: 242 GRAGRVE-----------------------------------AASSIFRIMQEQGFTPDA 266
Query: 265 QTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSG----------- 310
TY ++ +A+ G ++ V R+ + + D Y +IH +G
Sbjct: 267 VTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQ 326
Query: 311 ---HGEYIDEVSAIVC--------FVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKH 359
G D V+ V FVN E + SQ + P+ Q ++ ++C YAK
Sbjct: 327 MKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQ--VRPTLQAFSAMICAYAK- 383
Query: 360 GDM 362
DM
Sbjct: 384 ADM 386
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 83/199 (41%), Gaps = 7/199 (3%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN L+ N +++ QG +P+ TY + +IS Y + G +E
Sbjct: 195 DTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTY------NAMISVYGRAGRVE 248
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A+ I M+++ F +N++++ ++ + E I MM A TY ++
Sbjct: 249 AASSIFRIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIRGMMRDARCSSDEITYNTMI 308
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
Y K G + +K + +F + + + + A + M ++ +
Sbjct: 309 HMYGKAGMHRKAEELYVQMKEEGRCPDSVTFTVLIDTLGKAGFVNEAAAMFEDMLKSQVR 368
Query: 262 PSAQTYTKLMCGYAKHGDM 280
P+ Q ++ ++C YAK DM
Sbjct: 369 PTLQAFSAMICAYAK-ADM 386
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/352 (19%), Positives = 139/352 (39%), Gaps = 43/352 (12%)
Query: 64 LPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQ 123
+ C F V + V + I+ Y L +++ + E F L+ G N Y
Sbjct: 635 IDCLHAFDVKDSAMHVAI-IASYGKL-KLWQNAEIVFR------DLQQHGFAGNTSAY-- 684
Query: 124 LISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILT 183
S L+S Y + GN E AT+ L+ M + N ++ +A
Sbjct: 685 ----SALLSAYAETGNFERATRALDNMVAAGLQPNATCANYVLEAFGRAGKAKEISEFFQ 740
Query: 184 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLK-----PQSELFLCFSFQLTNLL 238
+ + G+ P+++T+ + ++++G+++ ++ +K P ++F LL
Sbjct: 741 RLPEMGISPNSRTFVVIFHAFSRNGNLEEARSMYRQMKEAGFSPSIQVF-------KALL 793
Query: 239 ILVSSDMAS--AEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVN 296
L S + AE ++ + +AGLE Y ++ Y+K G + + +
Sbjct: 794 ALYSRETVEIDAEELVKDIKKAGLELDIDIYNHMISLYSKLGSYRNAALVFKGMQEIGCS 853
Query: 297 GDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY 356
D + + + + E A++ M + G P+ TYT L+ Y
Sbjct: 854 PDATTFNTLIMLYSRNQMVQEAQALL------------REMIKTGNAPNISTYTTLISAY 901
Query: 357 AK---HGDMDSIRRLLAQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
+ + D + + + +A+ G Y +I+ +G I+EII +++
Sbjct: 902 GRLQAYEDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMK 953
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 90/219 (41%), Gaps = 24/219 (10%)
Query: 195 QTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NLLILVSSDMASAEGILT 253
Q Y LM YA+HGD +S++ + ++ + C +T N++I + EG+ +
Sbjct: 126 QVYNSLMSVYARHGDWNSVQQLLCRMQDRG----CRPDLVTFNIVIKARTRGGMQEGLAS 181
Query: 254 MMSQ----AGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
+ Q AGL P TY L+ + + + + + + D ++V
Sbjct: 182 SLLQDVYAAGLRPDTITYNTLISACSLNNRLSDAILIFEEMQRQGCDPDIWTYNAMISVY 241
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G ++ S+I +M + G P A TY ++ +A+ G ++ + R+
Sbjct: 242 GRAGRVEAASSIF------------RIMQEQGFTPDAVTYNSVLHAFARDGRIEEVERIR 289
Query: 370 AQNGSSLVNGD---YLDIIHALAVSGHGEYIDEIISKIQ 405
+ + D Y +IH +G +E+ +++
Sbjct: 290 GMMRDARCSSDEITYNTMIHMYGKAGMHRKAEELYVQMK 328
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 6/133 (4%)
Query: 76 ELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYC 135
E+ D + +N L+ +Y N+ L ++ G PN TY LIS + Y
Sbjct: 849 EIGCSPDATTFNTLIMLYSRNQMVQEAQALLREMIKTGNAPNISTYTTLISAYGRLQAY- 907
Query: 136 QDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQ 195
E A + + + + +N +I + +A + E I+ M G EPS
Sbjct: 908 -----EDAELVFKSIAETGCKPDATAYNVMINVYRKAGEHRKIEEIIEQMKVDGFEPSLT 962
Query: 196 TYTKLMCGYAKHG 208
T LM Y K G
Sbjct: 963 TIHMLMDSYGKGG 975
>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Glycine max]
Length = 1078
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/299 (21%), Positives = 133/299 (44%), Gaps = 36/299 (12%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D++ +N LL + + L K+E G+ P VTY + L++ YC+ G +
Sbjct: 174 DVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTY------NTLLNWYCKKGRYK 227
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEG--ILTMMSQAGLEPSAQTYTK 199
A+++++ M K + +N I + D SA+G +L M + + P+ TY
Sbjct: 228 AASQLIDCMASKGIGVDVCTYNVFI--DNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNT 285
Query: 200 LMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLT-NLLI---LVSSDMASAEGILTMM 255
L+ G+ + G ++ + TK+ + LF +T N LI + ++ A ++ +M
Sbjct: 286 LISGFVREGKIE-VATKVFD---EMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVM 341
Query: 256 SQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQ---SGSSLVNGDYLDIIHALAVSGHG 312
GL P+ TY L+ G K+ + V +L + G + + Y +I L +G
Sbjct: 342 VSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNG-- 399
Query: 313 EYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
++E ++ M + + P T++ L+ G+ + G +++ + ++ +
Sbjct: 400 -MLEEAVQLL------------DDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCK 445
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 97/229 (42%), Gaps = 9/229 (3%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y +L+ L + H + ++ ++ +EP+ V + +I +Y + G
Sbjct: 669 YTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIID------QYSRKGKTSKVND 722
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
IL M+ K + +N L++G+++ + MA + M + G P ++ L+ GY
Sbjct: 723 ILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYC 782
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
+ D + + + + F+F + ++M A ++ M+Q + P+
Sbjct: 783 QSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVD 842
Query: 266 TYTKLMCGYAKHGDMDSVRRLLA---QSGSSLVNGDYLDIIHALAVSGH 311
TY L G + D R+L +SGS N Y+ +I+ + G+
Sbjct: 843 TYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGN 891
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 113/283 (39%), Gaps = 32/283 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
YN L+ ++ T ++ + PN +TY LI+ +C GNI A +
Sbjct: 283 YNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAG------HCTTGNIGEALR 336
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+++ M +E + AL+ G + + IL M G+ S +YT ++ G
Sbjct: 337 LMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLC 396
Query: 206 KHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQ 265
K+G ++ + + S +F + + +A+ I+ M + GL P+
Sbjct: 397 KNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGI 456
Query: 266 TYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGH-GEYIDEVSAIVCF 324
Y+ L+ Y K G + + ++A AV H G D + V
Sbjct: 457 LYSTLIYNYCKMGYLK-------------------EALNAYAVMNHSGHVADHFTCNVLV 497
Query: 325 VNIC-FHWLEGP-----MMSQAGLEPSAQTYTKLMCGYAKHGD 361
C + LE MS+ GL+P++ T+ ++ GY GD
Sbjct: 498 ATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGD 540
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 113/289 (39%), Gaps = 61/289 (21%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAK-LESQGIEPNRVTYQQLISNSKLISKYCQ 136
++ +++ YN LL Y H + L K + G P++ ++ LI YCQ
Sbjct: 731 NLCFNLATYNILLHGY-AKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILG------YCQ 783
Query: 137 DGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQT 196
+ + A KIL ++ + I FN LI + N+M A ++ M+Q + P+ T
Sbjct: 784 SKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDT 843
Query: 197 YTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMS 256
Y L G ++ +SD A +L ++
Sbjct: 844 YNALFNG-----------------------------------LIRTSDFHKAHRVLQVLL 868
Query: 257 QAGLEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGE 313
++G P+ + Y L+ G + G++ +L + G S N I+ LA S E
Sbjct: 869 ESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIE 928
Query: 314 YIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDM 362
+AI W+ +M + + P+ T+T LM Y K ++
Sbjct: 929 -----NAI---------WVL-DLMLEMQIIPTVATFTTLMHVYCKEANV 962
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 161/403 (39%), Gaps = 48/403 (11%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
++ L+RV L N + +G+ P+ T ++ + ++ ++
Sbjct: 108 FDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGS------LVKEQKVDMFWS 161
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYA 205
+ M K FN L+ + +A +L M ++G+ P+A TY L+ Y
Sbjct: 162 FFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYC 221
Query: 206 KHGDMDSIKTKIPSLKPQS-ELFLC-FSFQLTNLLILVSSDMASAEG--ILTMMSQAGLE 261
K G + I + + + +C ++ + NL D SA+G +L M + +
Sbjct: 222 KKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNL----CRDSRSAKGYLLLKRMRRNMVY 277
Query: 262 PSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEY--IDEVS 319
P+ TY L+ G+ + G ++ ++ + SL N I + ++GH I E
Sbjct: 278 PNEITYNTLISGFVREGKIEVATKVFDE--MSLFNLLPNSITYNTLIAGHCTTGNIGEAL 335
Query: 320 AIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGY---AKHGDMDSIRRLLAQNGSSL 376
++ +M GL P+ TY L+ G A+ G + SI + G +
Sbjct: 336 RLM------------DVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRV 383
Query: 377 VNGDYLDIIHALAVSGHGE----YIDEIIS-KIQPGVGYSADAANHIYHLINKGQIDAAY 431
+ Y +I L +G E +D+++ + P V + N + + G+I+ A
Sbjct: 384 SHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRV---GKINNAK 440
Query: 432 RIVNTLARSANINGEQLPVGGFLVRHMVKTNQPGVGYSADAAN 474
I+ + ++ L G L ++ N +GY +A N
Sbjct: 441 EIMCKMYKTG------LVPNGILYSTLI-YNYCKMGYLKEALN 476
Score = 43.1 bits (100), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 18/196 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
++ YNAL + L L G P T +Q I+ LI+ C+ GNI+
Sbjct: 840 NVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVP---TNKQYIT---LINGMCRVGNIK 893
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
GA K+ + M+ +A++ G + + + +A +L +M + + P+ T+T LM
Sbjct: 894 GAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLM 953
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLC---FSFQLTNLLI---LVSSDMASAEGILTMM 255
Y K ++ +L+ +S + C N+LI + D+ +A + M
Sbjct: 954 HVYCKEANVAK------ALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEM 1007
Query: 256 SQAGLEPSAQTYTKLM 271
Q L P+ Y L+
Sbjct: 1008 KQRDLWPNTSIYIVLI 1023
Score = 42.7 bits (99), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 125/344 (36%), Gaps = 51/344 (14%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATK 145
Y LL+ H F +L PN V +I N+KL S C+ GN+ A
Sbjct: 563 YGGLLKGLCIGGHINEALKFFHRLRCI---PNAV--DNVIFNTKLTST-CRSGNLSDAIA 616
Query: 146 ILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGL-EPSAQTYTKLMCGY 204
++ M F + LI G + + +A + + GL P+ YT L+ G
Sbjct: 617 LINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGL 676
Query: 205 AKHGDMDSIKTKIPSL-----KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
KHG + + +P + F Q + + IL+ M
Sbjct: 677 LKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSR-----KGKTSKVNDILSTMKSKN 731
Query: 260 LEPSAQTYTKLMCGYAKHGDM--------DSVRRLLAQ---SGSSLVNGDY--------L 300
L + TY L+ GYAK M D +R S SL+ G +
Sbjct: 732 LCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAI 791
Query: 301 DIIHALAVSGHGEYIDEVSAIVCFVNIC--------FHWLEGPMMSQAGLEPSAQTYTKL 352
I+ + + GH ID + + C F ++ M+Q + P+ TY L
Sbjct: 792 KILRWITLEGH--VIDRFTFNMLITKFCERNEMKKAFELVK--QMNQFMVIPNVDTYNAL 847
Query: 353 MCGYAKHGDMDSIRRLLA---QNGSSLVNGDYLDIIHALAVSGH 393
G + D R+L ++GS N Y+ +I+ + G+
Sbjct: 848 FNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGN 891
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 58/304 (19%), Positives = 107/304 (35%), Gaps = 58/304 (19%)
Query: 62 GNLPCEDPFSVHTGELDVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY 121
G L + F H + + + ++ ++ Y ++ K+ S G P+ TY
Sbjct: 504 GKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTY 563
Query: 122 QQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGI 181
L+ C G+I A K +R + +FN + ++ +++ A +
Sbjct: 564 ------GGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIAL 617
Query: 182 LTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILV 241
+ M P TYT L+ G K G +V
Sbjct: 618 INEMVTNDFLPDNFTYTNLIAGLCKKGK------------------------------IV 647
Query: 242 SSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLD 301
++ + S + I + L P+ YT L+ G KHG + + + + V D +
Sbjct: 648 AALLLSGKAI----EKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVA 703
Query: 302 ---IIHALAVSGHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAK 358
II + G ++++ + + N+CF + TY L+ GYAK
Sbjct: 704 FNVIIDQYSRKGKTSKVNDILSTMKSKNLCF---------------NLATYNILLHGYAK 748
Query: 359 HGDM 362
M
Sbjct: 749 RHAM 752
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 93/240 (38%), Gaps = 12/240 (5%)
Query: 130 LISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAG 189
LI+ C+ G I+ A +L+ M +++ + +LI G Q N + A ++ M ++G
Sbjct: 133 LIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESG 192
Query: 190 LEPSAQTYTKLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAE 249
L P Y L+ G K ++ + + + FS+ + S A
Sbjct: 193 LTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAG 252
Query: 250 GILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVS 309
IL M + P TY LM G+ K MD RLL +I +
Sbjct: 253 KILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAP---TVITYTTLI 309
Query: 310 GHGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
G D ++ + +E M +AG+ P TY L+ G K G ++ LL
Sbjct: 310 GGFSRADRLADA-------YRVMED--MFKAGISPDLVTYNCLLDGLCKAGKLEEAHELL 360
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 133/336 (39%), Gaps = 48/336 (14%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D YN ++ ++ L K+ + P+ VTY L+ +C+ ++
Sbjct: 231 DTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDG------FCKVSKMD 284
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A ++LE M + + + LI G S+A+ +A A ++ M +AG+ P TY L+
Sbjct: 285 EAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLL 344
Query: 202 CGYAKHGDMDSIKTKIPSL--KPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAG 259
G K G ++ + + K + + +S + L L D A +L MM + G
Sbjct: 345 DGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVD--DARLLLEMMLERG 402
Query: 260 LEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEVS 319
+P+ T+ ++ G+ K G +D ++L E + EVS
Sbjct: 403 CQPNLVTFNTMIDGFCKAGKVDEGHKVL-------------------------ELMKEVS 437
Query: 320 A---IVCFVNICFHWLEGPMMSQA----GLEPSAQTYTKL---MCGYAKHGDMDSIRRLL 369
+V + + + + M A G+ P +Y+ + +C K + + L+
Sbjct: 438 CTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLM 497
Query: 370 AQNGSSLVNGDYLDIIHALAVSGHGEYIDEIISKIQ 405
+ G + Y II L G DE + +Q
Sbjct: 498 TKQGCPPTSSHYALIIGGLCDVERG---DEALKMLQ 530
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 137/343 (39%), Gaps = 34/343 (9%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
D+ YN LL + L + + P+ VTY S L++ C+ G ++
Sbjct: 336 DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTY------SILVNGLCKLGKVD 389
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +LE M ++ + FN +I G +A + +L +M + P TY+ L+
Sbjct: 390 DARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLI 449
Query: 202 CGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLE 261
GY K M I + P +S L L + + A+ ++ +M++ G
Sbjct: 450 DGYCKANRMQD-AFAILGISPDKAS---YSSMLEGL--CSTGKVEEAQEVMDLMTKQGCP 503
Query: 262 PSAQTYTKL---MCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHALAVSGHGEYIDEV 318
P++ Y + +C + + + +++++ G Y +I+ L + E D +
Sbjct: 504 PTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVE--DAI 561
Query: 319 SAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQNGSSLVN 378
+ + +M + G P TYT L+ G+ K MD+ + S
Sbjct: 562 NVL-------------DVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCE 608
Query: 379 GDYLD---IIHALAVSGHGEYIDEIISKIQPGVGYSADAANHI 418
D L +I SG+ E E++ ++ G + DAA +
Sbjct: 609 PDKLAYNILISGFCQSGNVEKAIEVM-QLMLEKGCNPDAATYF 650
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 105/294 (35%), Gaps = 67/294 (22%)
Query: 82 DISHYNALLRVYL---DNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
D+ +N +L+ Y D + S F K+ P TY LI CQ
Sbjct: 58 DVITHNTILKAYCQIGDLDRALS--HFRGKM---WCSPTAFTY------CILIHGLCQCQ 106
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
I+ A ++L+ M K V+N LI G + + +A +L MM + P TYT
Sbjct: 107 RIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYT 166
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G + +D A ++ M ++
Sbjct: 167 SLIVGCCQTNALD-----------------------------------EARKLMEKMKES 191
Query: 259 GLEPSAQTYTKLMCGYAKHGDMDSVRRLL---AQSGSSLVNGDYLDIIHALAVSGHGEYI 315
GL P Y L+ G K ++ V +LL ++G Y ++ L SG E
Sbjct: 192 GLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEA 251
Query: 316 DEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
++ LE + + G P TY LM G+ K MD RLL
Sbjct: 252 GKI-------------LEKMIEKKCG--PDVVTYNSLMDGFCKVSKMDEAERLL 290
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 118/298 (39%), Gaps = 30/298 (10%)
Query: 78 DVPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQD 137
D D + YN L+ + + L + + P+ +TY LI CQ
Sbjct: 122 DCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGC------CQT 175
Query: 138 GNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTY 197
++ A K++E M++ +NAL+ G + N + +L M +AG EP +Y
Sbjct: 176 NALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSY 235
Query: 198 TKL---MCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTM 254
+ +C K+ + I K+ K ++ S L + VS M AE +L
Sbjct: 236 NTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNS--LMDGFCKVSK-MDEAERLLED 292
Query: 255 MSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGD---YLDIIHALAVSGH 311
M P+ TYT L+ G+++ + R++ + ++ D Y ++ L +G
Sbjct: 293 MVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGK 352
Query: 312 GEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLL 369
E E+ + M + P TY+ L+ G K G +D R LL
Sbjct: 353 LEEAHELLEV---------------MVEKDCAPDVVTYSILVNGLCKLGKVDDARLLL 395
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 6/133 (4%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
P SHY ++ D E L + +G EPN TY S LI+ C+
Sbjct: 502 CPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTY------SILINGLCKTK 555
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A +L+ M +K + +LI G + N M +A M +G EP Y
Sbjct: 556 RVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYN 615
Query: 199 KLMCGYAKHGDMD 211
L+ G+ + G+++
Sbjct: 616 ILISGFCQSGNVE 628
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 120/297 (40%), Gaps = 25/297 (8%)
Query: 79 VPLDISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDG 138
P D YN ++ ++ L ++ G PN +Y ++ +C+
Sbjct: 40 CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHG------FCKAN 93
Query: 139 NIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYT 198
+E A +LE M + P + +I G + + + A ++ M Q G +P+ TY
Sbjct: 94 RVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYG 153
Query: 199 KLMCGYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQA 258
L+ G+ + GD+D + + + ++ + + SA + M ++
Sbjct: 154 TLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEES 213
Query: 259 G-LEPSAQTYTKLMCGYAKHGDMDSVRRL---LAQSGSSLVNGDYLDIIHALAVSGHGEY 314
G P TY+ ++ K G +D RL + G S Y ++H L +G
Sbjct: 214 GSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGK--- 270
Query: 315 IDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDSIRRLLAQ 371
+DE +A++ M+++G P+ TY ++ G+ K G +D LL +
Sbjct: 271 LDEATALL------------QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEE 315
Score = 59.7 bits (143), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 130/313 (41%), Gaps = 65/313 (20%)
Query: 105 FLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNA 164
L ++ G +PN VTY + L+ +C+ G E A ++E M +K + + +N+
Sbjct: 312 LLEEMVDGGCQPNVVTY------TVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNS 365
Query: 165 LIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHG---------------- 208
L+ + +++ A +L+ M Q G P+ +Y ++ G K
Sbjct: 366 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425
Query: 209 ---DMDSIKTKIPSLKPQSELFLCFSFQLTNLL------------------ILVSSDMAS 247
D+ + T I ++ + + +++L NL+ + S
Sbjct: 426 CVPDIVTFNTIIDAMCKTYRVDI--AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQ 483
Query: 248 AEGILTMMSQA-GLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDYLDIIHAL 306
AE +L M++ G P TY ++ G K +D +L Q S + D D+ +++
Sbjct: 484 AEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPD--DVTYSI 541
Query: 307 AVSG--HGEYIDEVSAIVCFVNICFHWLEGPMMSQAGLEPSAQTYTKLMCGYAKHGDMDS 364
+S ++DE + ++ +M + G +P A TY L+ G+ K G++D
Sbjct: 542 VISSLCKWRFMDEANNVL------------ELMLKNGFDPGAITYGTLIDGFCKTGNLDK 589
Query: 365 ---IRRLLAQNGS 374
I +LL GS
Sbjct: 590 ALEILQLLLSKGS 602
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 135/352 (38%), Gaps = 77/352 (21%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTY--------------------QQLI 125
YN+LL ++ + L+ + +G PN V+Y +Q++
Sbjct: 363 YNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 422
Query: 126 SNS---------KLISKYCQDGNIEGATKILEFMRDKTFPISEGVFNALIYGHSQANDMA 176
SN+ +I C+ ++ A ++ +++ + +N+L++G ++
Sbjct: 423 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 482
Query: 177 SAEGILTMMSQA-GLEPSAQTYTKLMCGYAKHGDMDS-----IKTKIPSLKPQSELFLCF 230
AE +L M++ G P TY ++ G K +D ++ L P + +
Sbjct: 483 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD---VTY 539
Query: 231 SFQLTNLLILVSSDMASAEGILTMMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQS 290
S +++L M A +L +M + G +P A TY L+ G+ K G++D
Sbjct: 540 SIVISSLCKW--RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKA------- 590
Query: 291 GSSLVNGDYLDIIHALAVSGHGEYIDEVSAIVCFVNICFHWLEG-----------PMMSQ 339
L+I+ L G Y D V+ +I WL M +
Sbjct: 591 ---------LEILQLLL--SKGSYPDVVT-----FSIFIDWLSKRGRLRQAGELLETMLR 634
Query: 340 AGLEPSAQTYTKLM---CGYAKHGDMDSIRRLLAQNGSSLVNGDYLDIIHAL 388
AGL P TY L+ C ++ D + ++ Q G N Y ++ L
Sbjct: 635 AGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 686
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 102/241 (42%), Gaps = 15/241 (6%)
Query: 86 YNALLRVYLDNEHTFSPTDFLAK--LESQGIEPNRVTYQQLISNSKLISKYCQDGNIEGA 143
YN+L+ L F ++L + QG P+ +TY +I C+ ++ A
Sbjct: 468 YNSLVH-GLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDG------LCKSKRVDRA 520
Query: 144 TKI-LEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLMC 202
K+ L+ + D P + ++ +I + M A +L +M + G +P A TY L+
Sbjct: 521 YKLFLQMLSDGLAP-DDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLID 579
Query: 203 GYAKHGDMDSIKTKIPSLKPQSELFLCFSFQLTNLLILVSSDMASAEGILTMMSQAGLEP 262
G+ K G++D + L + +F + + + A +L M +AGL P
Sbjct: 580 GFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP 639
Query: 263 SAQTYTKLM---CGYAKHGDMDSVRRLLAQSGSSLVNGDYLDII-HALAVSGHGEYIDEV 318
TY L+ C ++ D + ++ Q G N Y ++ H + + + + EV
Sbjct: 640 DTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEV 699
Query: 319 S 319
S
Sbjct: 700 S 700
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 25/226 (11%)
Query: 82 DISHYNALLRVYLDNEHTFSPTDFLAKLESQGIEPNRVTYQQLISNSKLISKYCQDGNIE 141
DI YN ++ ++ ++ S G+ P+ VTY S +IS C+ ++
Sbjct: 500 DIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY------SIVISSLCKWRFMD 553
Query: 142 GATKILEFMRDKTFPISEGVFNALIYGHSQANDMASAEGILTMMSQAGLEPSAQTYTKLM 201
A +LE M F + LI G + ++ A IL ++ G P T++ +
Sbjct: 554 EANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFI 613
Query: 202 CGYAKHGDM----DSIKTKIPS-LKPQSELFLCFSFQLTNLLILVSSDMASAE---GILT 253
+K G + + ++T + + L P + + N L+ D + E +
Sbjct: 614 DWLSKRGRLRQAGELLETMLRAGLVPDTVTY--------NTLLKGFCDASRTEDAVDLFE 665
Query: 254 MMSQAGLEPSAQTYTKLMCGYAKHGDMDSVRRLLAQSGSSLVNGDY 299
+M Q G EP TYT L+ D S + LLA+ S+V+ +
Sbjct: 666 VMRQCGCEPDNATYTTLV---GHLVDKKSYKDLLAEVSKSMVDTGF 708
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,697,487,347
Number of Sequences: 23463169
Number of extensions: 582197366
Number of successful extensions: 1705221
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2317
Number of HSP's successfully gapped in prelim test: 3015
Number of HSP's that attempted gapping in prelim test: 1642731
Number of HSP's gapped (non-prelim): 32101
length of query: 902
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 750
effective length of database: 8,792,793,679
effective search space: 6594595259250
effective search space used: 6594595259250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)